using columns: ACME_cluster0 sample7_cluster0 sample8_cluster0 ACME_cluster10 sample7_cluster10 sample8_cluster10 ACME_cluster29 sample7_cluster29 sample8_cluster29 ACME_cluster31 sample7_cluster31 sample8_cluster31 ACME_cluster43 sample7_cluster43 sample8_cluster43 ACME_cluster44 sample7_cluster44 sample8_cluster44 ACME_cluster47 sample7_cluster47 sample8_cluster47

2022-04-01 20:12:21 | INFO | Loading expression data
2022-04-01 20:12:22 | INFO | 0% of TFs found in both BED and expression file(s)
2022-04-01 20:12:22 | WARNING | Converting genes in expression table and BED to HGNC symbols
2022-04-01 20:12:26 | DEBUG | 97% of TFs found in the expression file(s)
2022-04-01 20:12:26 | DEBUG | 100% of TFs found in the BED file
2022-04-01 20:12:26 | INFO | 97% of TFs found in both BED and expression file(s)
2022-04-01 20:12:26 | DEBUG | Loading tf binding activity data
2022-04-01 20:12:26 | INFO | Loading binding data
2022-04-01 20:12:26 | INFO | Using all 859 TFs.
2022-04-01 20:12:26 | INFO | Using all 11410 regions.

Aggregating:   0%|          | 0/4 [00:00<?, ?contig/s]
Aggregating on smed_chr2. Overall progress:   0%|          | 0/4 [00:00<?, ?contig/s]
Aggregating on smed_chr2. Overall progress:  25%|██▌       | 1/4 [00:24<01:12, 24.13s/contig]
Aggregating on smed_chr4. Overall progress:  25%|██▌       | 1/4 [00:24<01:12, 24.13s/contig]
Aggregating on smed_chr4. Overall progress:  50%|█████     | 2/4 [00:36<00:34, 17.16s/contig]
Aggregating on smed_chr3. Overall progress:  50%|█████     | 2/4 [00:36<00:34, 17.16s/contig]
Aggregating on smed_chr3. Overall progress:  75%|███████▌  | 3/4 [00:53<00:17, 17.14s/contig]
Aggregating on smed_chr1. Overall progress:  75%|███████▌  | 3/4 [00:53<00:17, 17.14s/contig]
Aggregating on smed_chr1. Overall progress: 100%|██████████| 4/4 [01:22<00:00, 21.80s/contig]
Aggregating on smed_chr1. Overall progress: 100%|██████████| 4/4 [01:22<00:00, 20.62s/contig]
2022-04-01 20:14:37 | INFO | Processing expression-binding network
2022-04-01 20:16:31 | DEBUG | Using tf_expression, target_expression, weighted_binding, activity
2022-04-01 20:16:33 | INFO | Writing network