Module	Section	Sample Name	Source
fastp	all_sections	external-HS-029RNA-U2OS-1mM-EU-1hr-18672	/ceph/rimlsfnwi/data/moldevbio/heeringen/siebrenf/joost/results/qc/trimming/external-HS-029RNA-U2OS-1mM-EU-1hr-18672.fastp.json
Picard	InsertSizeMetrics	external-HS-029RNA-U2OS-1mM-EU-1hr-18672	/ceph/rimlsfnwi/data/moldevbio/heeringen/siebrenf/joost/results/qc/InsertSizeMetrics/hg38-external-HS-029RNA-U2OS-1mM-EU-1hr-18672.tsv
Picard	DuplicationMetrics	external-HS-029RNA-U2OS-1mM-EU-1hr-18672	/ceph/rimlsfnwi/data/moldevbio/heeringen/siebrenf/joost/results/qc/markdup/hg38-external-HS-029RNA-U2OS-1mM-EU-1hr-18672.samtools-coordinate.metrics.txt
SamTools pre-sieve	stats	external-HS-029RNA-U2OS-1mM-EU-1hr-18672	/ceph/rimlsfnwi/data/moldevbio/heeringen/siebrenf/joost/results/qc/samtools_stats/star/hg38-external-HS-029RNA-U2OS-1mM-EU-1hr-18672.samtools-coordinate.samtools_stats.txt
SamTools post-sieve	stats	external-HS-029RNA-U2OS-1mM-EU-1hr-18672	/ceph/rimlsfnwi/data/moldevbio/heeringen/siebrenf/joost/results/qc/samtools_stats/final_bam/hg38-external-HS-029RNA-U2OS-1mM-EU-1hr-18672.samtools-coordinate.samtools_stats.txt
deepTools	plotFingerprint	hg38	/ceph/rimlsfnwi/data/moldevbio/heeringen/siebrenf/joost/results/qc/plotFingerprint/hg38.tsv
Strandedness	infer_experiment	external-HS-029RNA-U2OS-1mM-EU-1hr-18672.strandedness	/ceph/rimlsfnwi/data/moldevbio/heeringen/siebrenf/joost/results/qc/strandedness/hg38-external-HS-029RNA-U2OS-1mM-EU-1hr-18672.strandedness.txt
mtnucratio	all_sections	external-HS-029RNA-U2OS-1mM-EU-1hr-18672	/ceph/rimlsfnwi/data/moldevbio/heeringen/siebrenf/joost/results/star/hg38-external-HS-029RNA-U2OS-1mM-EU-1hr-18672.samtools-coordinate-unsieved.bam.mtnucratiomtnuc.json