nohup: ignoring input Determining fragment size samtools: writing to "-" failed: Broken pipe samtools: error closing "-": -1 Using fragmentsize 185 as extend Using scale: 0.114231433858 Determining fragment size samtools: writing to "-" failed: Broken pipe samtools: error closing "-": -1 Using fragmentsize 200 as extend Using scale: 0.119310753232 Determining fragment size samtools: writing to "-" failed: Broken pipe samtools: error closing "-": -1 Using fragmentsize 170 as extend Using scale: 0.116635310488 Determining fragment size samtools: writing to "-" failed: Broken pipe samtools: error closing "-": -1 Using fragmentsize 170 as extend Using scale: 0.155335548123