track annotation
shortLabel Annotation
longLabel Gene Annotation
superTrack on show
priority 1

  track Xtropicalisv9.0.Named.primaryTrs
  longLabel Xenbase v9.0 Gene Models 
  shortLabel Xenbase v9.0
  parent annotation
  type bigBed 12
  bigDataUrl genes/sorted.bb
  searchIndex name
  searchTrix genes/sorted.ix
  visibility dense
  priority 1.1
  bedNameLabel name
  labelOnFeature off

  track gmapped_Xenopus_tropicalis.JGI_4.2.cdna.abinitio
  parent annotation
  shortLabel Xenopus tropicalis cdna abinitio
  longLabel Xtrop cdna abinitio
  type bigBed 12
  visibility dense
  bigDataUrl annotation/gmapped_Xenopus_tropicalis.JGI_4.2.cdna.abinitio.bb 


  track gmapped_Xenopus_tropicalis.JGI_4.2.cdna.all
  parent annotation
  shortLabel  Xtrop  cdna all
  longLabel Xtrop.cdna.all
  type bigBed 12
  visibility dense
  bigDataUrl annotation/gmapped_Xenopus_tropicalis.JGI_4.2.cdna.all.bb 


  track gmapped_xlaevisEST
  parent annotation
  shortLabel xlaevisEST
  longLabel xlaevisEST
  type bigBed 12
  visibility dense
  bigDataUrl annotation/gmapped_xlaevisEST.bb 


  track gmapped_xlaevisMRNA
  parent annotation
  shortLabel gmapped_xlaevisMRNA
  longLabel gmapped_xlaevisMRNA
  type bigBed 12
  visibility dense
  bigDataUrl annotation/gmapped_xlaevisMRNA.bb 


  track gmapped_Xt7-ASMs-ALTs-plus-TOP-other-MJG-22dec09
  parent annotation
  shortLabel gmapped_Xt7-ASMs-ALTs-plus-TOP-other-MJG-22dec09
  longLabel gmapped_Xt7-ASMs-ALTs-plus-TOP-other-MJG-22dec09
  type bigBed 12
  visibility dense
  bigDataUrl annotation/gmapped_Xt7-ASMs-ALTs-plus-TOP-other-MJG-22dec09.bb 


  track gmapped_Xt7-ASMs-SOLID-over-50-pct-10-plus-MJG-06oct08
  parent annotation
  shortLabel gmapped_Xt7-ASMs-SOLID-over-50-pct-10-plus-MJG-06oct08
  longLabel gmapped_Xt7-ASMs-SOLID-over-50-pct-10-plus-MJG-06oct08
  type bigBed 12
  visibility dense
  bigDataUrl annotation/gmapped_Xt7-ASMs-SOLID-over-50-pct-10-plus-MJG-06oct08.bb 


  track gmapped_Xt7-ORFs-ALTs-plus-TOP-other-MJG-22feb12.fasta
  parent annotation
  shortLabel gmapped_Xt7-ORFs-ALTs-plus-TOP-other-MJG-22feb12.fasta
  longLabel gmapped_Xt7-ORFs-ALTs-plus-TOP-other-MJG-22feb12.fasta
  type bigBed 12
  visibility dense
  bigDataUrl annotation/gmapped_Xt7-ORFs-ALTs-plus-TOP-other-MJG-22feb12.fasta.bb 


  track gmapped_xtropEST
  parent annotation
  shortLabel xtropEST
  longLabel xtropEST
  type bigBed 12
  visibility dense
  bigDataUrl annotation/gmapped_xtropEST.bb 


  track gmapped_xtropMRNA
  parent annotation
  shortLabel xtropMRNA
  longLabel xtropMRNA
  type bigBed 12
  visibility dense
  bigDataUrl annotation/gmapped_xtropMRNA.bb 



  track pitav1.1
  parent annotation
  shortLabel pitaNamed
  longLabel pita v1.1 Named
  type bigBed 12
  visibility dense
  bigDataUrl annotation/pita_xt9.0_1.1-beta.bb

  track stringtie
  parent annotation
  shortLabel Stringtie
  longLabel Stringtie ClutchA polyA
  type bigBed 12
  visibility dense
  bigDataUrl annotation/Stringtie_ClutchA_polyA.bb

  track pitaNoChip
  parent annotation
  shortLabel PitaNoChip
  longLabel Pita without h3k4me3
  type bigBed 12
  visibility dense
  bigDataUrl annotation/pitaNoChip.bb

  
  track pitaScaf
  parent annotation
  shortLabel Pita2.1
  longLabel Pita v2.1 UtrExtended
  type bigBed 12
  visibility dense
  bigDataUrl annotation/pita_xt9.0_2.1-beta.bb