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        If you use plots from MultiQC in a publication or presentation, please cite:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

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        About MultiQC

        This report was generated using MultiQC, version 1.15

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

        For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

        You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/ewels/MultiQC

        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2025-05-22, 13:36 CEST based on data in: /vol/molbio/martens/slrinzema/tmp/Niels_Velthuijs

        General Statistics

        Showing 16/16 rows and 5/7 columns.
        Sample Name% DuplicationM Reads After FilteringGC content% PF% Adapter
        47576_Media_B1_A06
        11.6%
        22.7
        47.1%
        98.5%
        0.3%
        47577_NaCl_B1_A08
        13.0%
        28.7
        46.8%
        98.8%
        0.7%
        47578_Tau_B1_A09
        13.1%
        32.4
        46.8%
        98.9%
        0.2%
        47579_NaCl_Tau_B1_A26
        16.1%
        24.7
        48.9%
        98.9%
        0.3%
        47580_Media_A_A27
        13.4%
        27.9
        47.2%
        98.7%
        0.5%
        47581_NaCl_A_A28
        14.2%
        25.0
        47.2%
        98.7%
        0.5%
        47582_Tau_A_A29
        13.6%
        24.8
        48.4%
        98.6%
        0.5%
        47583_NaCl_Tau_A_A30
        15.8%
        28.6
        48.2%
        98.5%
        0.4%
        47584_Media_B2_A37
        12.4%
        29.0
        47.0%
        98.9%
        0.3%
        47585_NaCl_B2_A38
        12.4%
        31.2
        46.7%
        99.1%
        0.2%
        47586_Tau_B2_A39
        11.9%
        32.9
        47.0%
        98.8%
        0.2%
        47587_NaCl_Tau_B2_A45
        13.7%
        32.4
        47.4%
        98.8%
        0.3%
        47588_Media_C_A60
        11.4%
        29.0
        45.7%
        99.0%
        0.4%
        47589_NaCl_C_A85
        12.0%
        30.6
        45.7%
        98.4%
        0.3%
        47590_Tau_C_A86
        14.0%
        34.4
        46.0%
        98.6%
        0.3%
        47591_NaCl_Tau_C_A87
        13.4%
        31.7
        46.3%
        98.6%
        0.2%

        fastp

        fastp An ultra-fast all-in-one FASTQ preprocessor (QC, adapters, trimming, filtering, splitting...).DOI: 10.1093/bioinformatics/bty560.

        Filtered Reads

        Filtering statistics of sampled reads.

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        Insert Sizes

        Insert size estimation of sampled reads.

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        Sequence Quality

        Average sequencing quality over each base of all reads.

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        GC Content

        Average GC content over each base of all reads.

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        N content

        Average N content over each base of all reads.

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        MultiQC v1.15 - Written by Phil Ewels, available on GitHub.

        This report uses HighCharts, jQuery, jQuery UI, Bootstrap, FileSaver.js and clipboard.js.