FastQCFastQC Report
Fri 17 Dec 2021
069_RNA_T1_53_Influenza_A15_S6_R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename069_RNA_T1_53_Influenza_A15_S6_R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21413004
Sequences flagged as poor quality0
Sequence length42
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCA1465140.6842290787411238No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1094070.5109371856466286No Hit
GATTAAGCCATGCATGTCTAAGTACGCACGGCCGGTACAGTG615430.28740946389399635No Hit
GTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAAACGGCGGG469800.21939938926831565No Hit
GTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGTAAT468820.21894172344991855No Hit
GTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTT420640.19644137739851913No Hit
GGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTC383430.1790640864775442No Hit
GACTAATCGAACCATCTAGTAGCTGGTTCCCTCCGAAGTTTC380980.17791992193155148No Hit
CAAAGATTAAGCCATGCATGTCTAAGTACGCACGGCCGGTAC373820.17457615942162996No Hit
GTTGTTGCCATGGTAATCCTGCTCAGTACGAGAGGAACCGCA350270.1635781696019858No Hit
GGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACG325170.1518563205797748No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAG307590.1436463562048557No Hit
CTTGGTGGTAGTAGCAAATATTCAAACGAGAACTTTGAAGGC296240.13834583881831808No Hit
CTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAAAC271460.12677343169599184No Hit
CTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCAT262890.12277119081470307No Hit
GACAGGTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATG241820.1129313757191658No Hit
AAGCCATGCATGTCTAAGTACGCACGGCCGGTACAGTGAAAC238140.11121279387049103No Hit
GGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG229100.10699106019874652No Hit
GTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGG227680.10632791176800789No Hit
CTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGG225320.10522577775635777No Hit

[OK]Adapter Content

Adapter graph