Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content 069_RNA_T0_20_RPMI_A37_S7_R1_001 069_RNA_T0_20_RPMI_A37_S7_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18988466.0 0.0 42.0 50.0 23.624290903707916 42.0 pass pass pass pass warn pass pass pass fail pass pass 069_RNA_T0_20_RPMI_A37_S7_R2_001 069_RNA_T0_20_RPMI_A37_S7_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18988466.0 0.0 42.0 51.0 28.72341548883223 42.0 pass pass pass pass warn pass pass pass fail warn pass 069_RNA_T0_26_Influenza_A44_S10_R1_001 069_RNA_T0_26_Influenza_A44_S10_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18214636.0 0.0 42.0 47.0 31.36064541581613 42.0 pass pass pass pass warn pass pass pass fail pass pass 069_RNA_T0_26_Influenza_A44_S10_R2_001 069_RNA_T0_26_Influenza_A44_S10_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 18214636.0 0.0 42.0 49.0 34.365026221661715 42.0 pass pass pass pass warn pass pass pass fail warn pass 069_RNA_T0_26_SARS_A45_S6_R1_001 069_RNA_T0_26_SARS_A45_S6_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 14919839.0 0.0 42.0 48.0 18.49912077591155 42.0 pass pass pass pass warn pass pass pass fail pass pass 069_RNA_T0_26_SARS_A45_S6_R2_001 069_RNA_T0_26_SARS_A45_S6_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 14919839.0 0.0 42.0 49.0 22.88090205662748 42.0 pass pass pass pass warn pass pass pass fail warn pass 069_RNA_T0_27_Influenza_A62_S4_R1_001 069_RNA_T0_27_Influenza_A62_S4_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 14759321.0 0.0 42.0 47.0 16.798315711915883 42.0 pass pass pass pass warn pass pass pass fail pass pass 069_RNA_T0_27_Influenza_A62_S4_R2_001 069_RNA_T0_27_Influenza_A62_S4_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 14759321.0 0.0 42.0 48.0 20.63342506687193 42.0 pass pass pass pass warn pass pass pass fail warn pass 069_RNA_T0_27_RPMI_A61_S8_R1_001 069_RNA_T0_27_RPMI_A61_S8_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16816980.0 0.0 42.0 48.0 28.131041364344522 42.0 pass pass pass pass warn pass pass pass fail pass pass 069_RNA_T0_27_RPMI_A61_S8_R2_001 069_RNA_T0_27_RPMI_A61_S8_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16816980.0 0.0 42.0 49.0 31.984795455248477 42.0 pass pass pass pass warn pass pass pass fail warn pass 069_RNA_T0_27_SARS_A63_S5_R1_001 069_RNA_T0_27_SARS_A63_S5_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16179455.0 0.0 42.0 48.0 19.13237163757393 42.0 pass pass pass pass warn pass pass pass fail pass pass 069_RNA_T0_27_SARS_A63_S5_R2_001 069_RNA_T0_27_SARS_A63_S5_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 16179455.0 0.0 42.0 50.0 23.416562174156265 42.0 pass pass pass pass warn pass pass pass fail warn pass 069_RNA_T1_53_SARS_A15_S13_R1_001 069_RNA_T1_53_SARS_A15_S13_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 138472.0 0.0 42.0 48.0 15.756976139580564 42.0 pass pass pass pass warn warn pass pass fail pass pass 069_RNA_T1_53_SARS_A15_S13_R2_001 069_RNA_T1_53_SARS_A15_S13_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 138472.0 0.0 42.0 50.0 18.79657981396961 42.0 pass pass pass pass warn pass pass pass fail warn pass 069_RNA_T1_53_SARS_A16_S13_R1_001 069_RNA_T1_53_SARS_A16_S13_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 27851567.0 0.0 42.0 48.0 38.78423505396216 42.0 pass pass pass pass warn pass pass pass fail pass pass 069_RNA_T1_53_SARS_A16_S13_R2_001 069_RNA_T1_53_SARS_A16_S13_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 27851567.0 0.0 42.0 49.0 44.88940876421254 42.0 pass pass pass pass warn pass pass pass fail warn pass 069_RNA_T2_20_RPMI_A40_S1_R1_001 069_RNA_T2_20_RPMI_A40_S1_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 14107820.0 0.0 42.0 53.0 12.468224040315011 42.0 pass pass pass pass warn warn pass pass fail warn pass 069_RNA_T2_20_RPMI_A40_S1_R2_001 069_RNA_T2_20_RPMI_A40_S1_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 14107820.0 0.0 42.0 54.0 17.476379334468987 42.0 pass pass pass pass warn pass pass pass fail warn pass 069_RNA_T2_20_SARS_A42_S2_R1_001 069_RNA_T2_20_SARS_A42_S2_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 11731281.0 0.0 42.0 50.0 19.0577976496407 42.0 pass pass pass pass warn pass pass pass fail pass pass 069_RNA_T2_20_SARS_A42_S2_R2_001 069_RNA_T2_20_SARS_A42_S2_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 11731281.0 0.0 42.0 51.0 24.83120284280582 42.0 pass pass pass pass warn pass pass pass fail warn pass 069_RNA_T2_47_SARS_A93_S3_R1_001 069_RNA_T2_47_SARS_A93_S3_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 13942865.0 0.0 42.0 48.0 25.297315161265377 42.0 pass pass pass pass fail warn pass pass fail pass pass 069_RNA_T2_47_SARS_A93_S3_R2_001 069_RNA_T2_47_SARS_A93_S3_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 13942865.0 0.0 42.0 49.0 28.78534798021143 42.0 pass pass pass pass warn pass pass pass fail warn pass 069_RNA_T3_47_SARS_A96_S12_R1_001 069_RNA_T3_47_SARS_A96_S12_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 9282220.0 0.0 42.0 47.0 18.440637664735256 42.0 pass pass pass pass fail pass pass pass fail pass pass 069_RNA_T3_47_SARS_A96_S12_R2_001 069_RNA_T3_47_SARS_A96_S12_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 9282220.0 0.0 42.0 48.0 21.270828258844876 42.0 pass pass pass pass warn pass pass pass fail warn pass ATAC_mpkDCT_2_N711_S24_R1_001 ATAC_mpkDCT_2_N711_S24_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 31465854.0 0.0 42.0 41.0 34.92536603376636 42.0 pass pass pass pass fail pass pass pass fail pass pass ATAC_mpkDCT_2_N711_S24_R2_001 ATAC_mpkDCT_2_N711_S24_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 31465854.0 0.0 42.0 41.0 36.86864263662528 42.0 pass pass pass pass fail pass pass pass fail pass pass