Index of /jsmits/RNA_seq/hg38

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]ATACLSCOuyang1bw.bigWig2021-01-19 22:22 23M 
[ ]ATACLSCOuyang1pk.bigNarrowPeak2021-01-19 22:22 2.0M 
[ ]ATACLSCOuyang2bw.bigWig2021-01-19 22:22 255M 
[ ]ATACLSCOuyang2pk.bigNarrowPeak2021-01-19 22:22 7.1M 
[ ]ATAC_BAM_KC.bw2021-11-22 12:21 339M 
[ ]ATAC_BAM_KC_merged.bigWig2021-08-02 12:51 339M 
[ ]ATAC_BAM_LSC.bw2021-11-22 12:25 541M 
[ ]ATAC_BAM_LSC_merged.bigWig2021-08-02 12:56 542M 
[ ]Accesible_regions_ATAC_regions.bigBed2021-02-26 18:14 5.1M 
[ ]Accesible_regions_H3K4me3_regions.bigBed2021-02-26 18:15 5.1M 
[ ]Accesible_regions_H3K27ac_regions.bigBed2021-02-26 18:14 4.8M 
[ ]Accesible_regions_H3K27me3_regions.bigBed2021-02-26 18:15 4.1M 
[ ]ChipseqKCHKC1H3K27me3bw.bigWig2020-11-24 14:30 292M 
[ ]ChipseqKCHKC1H3K27me3pk.bigBed2020-11-24 14:30 1.0M 
[ ]DOMH3K4me3bw.bigWig2020-11-25 14:50 128M 
[ ]DOMH3K4me3pk.bigNarrowPeak2020-11-25 14:50 1.8M 
[ ]DOMH3K27acbw.bigWig2020-11-24 14:30 169M 
[ ]DOMH3K27acpk.bigBed2020-11-24 14:30 3.0M 
[ ]DOMH3K27me3bw.bigWig2020-11-24 14:30 292M 
[ ]DOMH3K27me3pk.bigBed2020-11-24 14:30 1.2M 
[ ]Dombi23ATAC1bw.bigWig2021-01-19 22:22 36M 
[ ]Dombi23ATAC1pk.bigNarrowPeak2021-01-19 22:22 715K 
[ ]Dombi23ATAC2bw.bigWig2021-01-19 22:22 4.4M 
[ ]Dombi23ATAC2pk.bigNarrowPeak2021-01-19 22:22 396K 
[ ]Dombi23unsurep63chipbw.bigWig2020-11-25 14:50 206M 
[ ]Dombi23unsurep63chippk.bigNarrowPeak2020-11-25 14:50 1.4M 
[ ]EHF_motifs_0.1_sorted.bigbed2022-02-11 12:54 1.7M 
[ ]ELF3_motifs_0.1_sorted.bigbed2022-02-11 12:14 1.1M 
[ ]FISHER_LSCPAX6pk.bigNarrowPeak2022-02-14 09:36 325K 
[ ]FOXC1_motifs_0.1_sorted.bigbed2022-02-11 12:44 2.0M 
[ ]Fisher_LSC_p63.bignarrowPeak2022-02-11 21:20 446K 
[ ]Fisher_p63_summits.bed2022-02-11 21:20 3.0M 
[ ]GRCh38.p13-KC_RUNX1.bignarrowPeak2022-02-11 21:23 1.3M 
[ ]GRCh38.p13-KC_p63.bignarrowPeak2022-02-11 21:04 832K 
[ ]GRCh38.p13-LSC_FOXC1.bignarrowPeak2022-02-11 20:44 1.0M 
[ ]GRCh38.p13-LSC_PAX6.bignarrowPeak2022-02-11 20:44 325K 
[ ]GRCh38.p13-LSC_RUNX1.bignarrowPeak2022-02-11 20:44 448K 
[ ]GRCh38.p13-LSC_SMAD3.bignarrowPeak2022-02-11 20:43 493K 
[ ]GRCh38.p13-LSC_p63.bignarrowPeak2022-02-11 21:20 446K 
[ ]H3K4me3_BAM_KC.bw2021-11-22 13:10 128M 
[ ]H3K4me3_BAM_LSC.bw2021-11-22 13:10 171M 
[ ]H3K4me3_BAM_LSC_merged.bigWig2021-08-03 15:46 340M 
[ ]H3K27ac_BAM_KC.bw2021-11-22 12:14 506M 
[ ]H3K27ac_BAM_KC_merged.bigWig2021-08-02 13:00 506M 
[ ]H3K27ac_BAM_LSC.bw2021-11-22 12:18 481M 
[ ]H3K27ac_BAM_LSC_merged.bigWig2021-08-02 13:03 481M 
[ ]H3K27me3_BAM_KC.bw2021-11-22 13:10 292M 
[ ]H3K27me3_BAM_LSC.bw2021-11-22 13:10 269M 
[ ]H3K27me3_BAM_LSC_merged.bigWig2021-08-03 15:52 799M 
[ ]HCK1p63chipbw.bigWig2020-11-25 14:50 160M 
[ ]HCK1p63chippk.bigNarrowPeak2020-11-25 14:50 2.4M 
[ ]HKC1H3K27acbw.bigWig2020-11-24 14:30 334M 
[ ]HKC1H3K27acpk.bigBed2020-11-24 14:30 4.9M 
[ ]HKCday01RNASeqforward.bigWig2020-12-01 13:50 14M 
[ ]HKCday01RNASeqreverse.bigWig2020-12-01 13:50 13M 
[ ]HKCday02RNASeqforward.bigWig2020-12-01 13:50 8.3M 
[ ]HKCday02RNASeqreverse.bigWig2020-12-01 13:50 8.0M 
[ ]HKCday21RNASeqforward.bigWig2020-12-01 13:50 13M 
[ ]HKCday21RNASeqreverse.bigWig2020-12-01 13:50 13M 
[ ]HKCday22RNASeqforward.bigWig2020-12-01 13:50 11M 
[ ]HKCday22RNASeqreverse.bigWig2020-12-01 13:50 11M 
[ ]HKCday41RNASeqforward.bigWig2020-12-01 13:50 8.7M 
[ ]HKCday41RNASeqreverse.bigWig2020-12-01 13:50 8.2M 
[ ]HKCday42RNASeqforward.bigWig2020-12-01 13:50 7.9M 
[ ]HKCday42RNASeqreverse.bigWig2020-12-01 13:50 7.7M 
[ ]HKCday71RNASeqforward.bigWig2020-12-01 13:50 19M 
[ ]HKCday71RNASeqreverse.bigWig2020-12-01 13:50 18M 
[ ]HKCday72RNASeqforward.bigWig2020-12-01 13:50 10M 
[ ]HKCday72RNASeqreverse.bigWig2020-12-01 13:50 10M 
[ ]IDR_LSCPAX6pk.bigNarrowPeak2022-02-11 21:07 931K 
[ ]IDR_LSC_p63.bignarrowPeak2022-02-11 21:06 393K 
[ ]IDR_p63_summits.bed2022-02-11 21:06 318K 
[ ]KC_ATAC_merged_bw.bigWig2020-11-02 15:52 337M 
[ ]LSC1PAX6bw.bigWig2021-02-19 17:44 136M 
[ ]LSC1PAX6pk.bigNarrowPeak2021-02-19 17:44 2.0M 
[ ]LSC2PAX6bw.bigWig2021-02-19 17:44 110M 
[ ]LSC2PAX6pk.bigNarrowPeak2021-02-19 17:44 1.8M 
[ ]LSCFOSL2pk.bigNarrowPeak2023-06-22 15:29 436K 
[ ]LSCFOSL21bw.bigWig2023-06-22 15:37 18M 
[ ]LSCFOSL21controlbw.bigWig2023-06-22 15:29 64M 
[ ]LSCFOSL22bw.bigWig2023-06-22 15:29 29M 
[ ]LSCFOSL22controlbw.bigWig2023-06-22 15:29 64M 
[ ]LSCFOXC1pk.bigNarrowPeak2022-02-11 21:07 1.9M 
[ ]LSCFOXC1rep1Ouyangbw.bigWig2022-02-09 18:32 180M 
[ ]LSCFOXC1rep1Ouyangpk.bigNarrowPeak2022-02-09 18:32 3.5M 
[ ]LSCFOXC1rep2Ouyangbw.bigWig2022-02-09 18:32 186M 
[ ]LSCFOXC1rep2Ouyangpk.bigNarrowPeak2022-02-09 18:32 3.6M 
[ ]LSCH3K4me3Ouyang1bw.bigWig2021-01-20 22:24 129M 
[ ]LSCH3K4me3Ouyang1pk.bigNarrowPeak2021-01-20 22:24 1.8M 
[ ]LSCH3K4me3Ouyang2bw.bigWig2021-01-20 22:24 99M 
[ ]LSCH3K4me3Ouyang2pk.bigNarrowPeak2021-01-20 22:24 2.0M 
[ ]LSCH3K27acOuyang1bw.bigWig2021-01-20 15:24 167M 
[ ]LSCH3K27acOuyang1pk.bigBed2021-01-20 15:24 2.7M 
[ ]LSCH3K27acOuyang2bw.bigWig2021-01-20 15:24 133M 
[ ]LSCH3K27acOuyang2pk.bigBed2021-01-20 15:24 2.9M 
[ ]LSCH3K27me3Ouyang1bw.bigWig2021-01-20 15:24 334M 
[ ]LSCH3K27me3Ouyang1pk.bigBed2021-01-20 15:24 3.2M 
[ ]LSCH3K27me3Ouyang2bw.bigWig2021-01-20 15:24 220M 
[ ]LSCH3K27me3Ouyang2pk.bigBed2021-01-20 15:24 1.1M 
[ ]LSCPAX6pk.bigNarrowPeak2022-02-11 21:07 931K 
[ ]LSCPAX6rep1Ouyangpk.bigNarrowPeak2022-02-09 18:32 2.0M 
[ ]LSCPAX6rep2Ouyangpk.bigNarrowPeak2022-02-09 18:32 1.8M 
[ ]LSCPRIMH3K27acbw.bigWig2020-11-24 14:30 202M 
[ ]LSCPRIMH3K27acpk.bigBed2020-11-24 14:30 2.5M 
[ ]LSCPRIMH3K27me3bw.bigWig2020-11-24 14:30 269M 
[ ]LSCPRIMH3K27me3pk.bigBed2020-11-24 14:30 873K 
[ ]LSCRNA1forward.bigWig2020-12-01 13:50 10M 
[ ]LSCRNA1reverse.bigWig2020-12-01 13:50 10M 
[ ]LSCRNA2forward.bigWig2020-12-01 13:50 9.0M 
[ ]LSCRNA2reverse.bigWig2020-12-01 13:50 8.6M 
[ ]LSCRUNX1pk.bigNarrowPeak2022-02-11 21:08 811K 
[ ]LSCRUNX1rep1Ouyangbw.bigWig2022-02-11 21:08 108M 
[ ]LSCRUNX1rep2Ouyangbw.bigWig2022-02-11 21:08 145M 
[ ]LSCSMAD3pk.bigNarrowPeak2022-02-11 21:08 588K 
[ ]LSCSMAD3rep1Ouyangbw.bigWig2022-02-11 21:08 92M 
[ ]LSCSMAD3rep2Ouyangbw.bigWig2022-02-11 21:08 95M 
[ ]LSC_ATAC_merged_bw.bigWig2020-11-02 15:56 330M 
[ ]LSC_RUNX1_merged.bw2022-02-15 13:23 272M 
[ ]LSC_SMAD3_merged.bw2022-02-15 13:21 204M 
[ ]LSClorenz1.bigWig2020-12-01 13:50 4.3M 
[ ]LSClorenz2.bigWig2020-12-01 13:50 4.5M 
[ ]LSCouyang1.bigWig2022-01-21 20:10 13M 
[ ]LSCouyang2.bigWig2022-01-21 20:10 13M 
[ ]LSCp63pk.bigNarrowPeak2022-02-11 21:08 393K 
[ ]OTX1_motifs_0.1_sorted.bigbed2022-02-11 12:23 619K 
[ ]PAX6_motifs_0.1_sorted.bigbed2022-02-11 12:33 1.6M 
[ ]PKC19ATAC1bw.bigWig2021-01-19 22:22 108M 
[ ]PKC19ATAC1pk.bigNarrowPeak2021-01-19 22:22 4.0M 
[ ]PKC19ATAC2bw.bigWig2021-01-19 22:22 88M 
[ ]PKC19ATAC2pk.bigNarrowPeak2021-01-19 22:22 4.1M 
[ ]PKC19ATAC3bw.bigWig2021-01-19 22:22 66M 
[ ]PKC19ATAC3pk.bigNarrowPeak2021-01-19 22:22 3.5M 
[ ]PKC19ATAC4bw.bigWig2021-01-19 22:22 45M 
[ ]PKC19ATAC4pk.bigNarrowPeak2021-01-19 22:22 2.2M 
[ ]PKC19RNA1forward.bigWig2020-12-01 13:50 9.8M 
[ ]PKC19RNA1reverse.bigWig2020-12-01 13:50 9.3M 
[ ]PKC19RNA2forward.bigWig2020-12-01 13:50 9.0M 
[ ]PKC19RNA2reverse.bigWig2020-12-01 13:50 8.4M 
[ ]PRIM2LSCunsurep63chipbw.bigWig2020-11-25 14:50 212M 
[ ]PRIM2LSCunsurep63chippk.bigNarrowPeak2020-11-25 14:50 2.2M 
[ ]PRIMLSCATAC1bw.bigWig2021-01-19 22:22 30M 
[ ]PRIMLSCATAC1pk.bigNarrowPeak2021-01-19 22:22 1.8M 
[ ]PRIMLSCATAC2bw.bigWig2021-01-19 22:22 44M 
[ ]PRIMLSCATAC2pk.bigNarrowPeak2021-01-19 22:22 2.1M 
[ ]PRIMLSCATAC3bw.bigWig2021-01-19 22:22 193M 
[ ]PRIMLSCATAC3pk.bigNarrowPeak2021-01-19 22:22 6.2M 
[ ]PRIMLSCATAC4bw.bigWig2021-01-19 22:22 57M 
[ ]PRIMLSCATAC4pk.bigNarrowPeak2021-01-19 22:22 3.5M 
[ ]PRIMLSCH3K4me3bw.bigWig2020-11-25 14:50 171M 
[ ]PRIMLSCH3K4me3pk.bigNarrowPeak2020-11-25 14:50 2.2M 
[ ]PRIMLSCp63chipbw.bigWig2020-11-25 14:50 143M 
[ ]PRIMLSCp63chippk.bigNarrowPeak2020-11-25 14:50 607K 
[ ]Promoters_ATAC_regions.bigBed2021-02-26 18:14 534K 
[ ]Promoters_H3K4me3_regions.bigBed2021-02-26 18:14 538K 
[ ]Promoters_H3K27ac_regions.bigBed2021-02-26 18:14 538K 
[ ]Promoters_H3K27me3_regions.bigBed2021-02-26 18:14 539K 
[ ]SkinFromEyeLid1forward.bigWig2020-12-01 13:50 160K 
[ ]SkinFromEyeLid1reverse.bigWig2020-12-01 13:50 164K 
[ ]SkinFromEyeLid2forward.bigWig2020-12-01 13:50 295K 
[ ]SkinFromEyeLid2reverse.bigWig2020-12-01 13:50 300K 
[ ]TFAP2A_motifs_0.1_sorted.bigbed2022-02-11 13:14 2.0M 
[ ]TF_motifs_all_motifs.bigBed2022-02-01 12:06 37M 
[ ]TF_motifs_all_motifs_FDR001.bigBed2022-02-01 13:43 6.2M 
[ ]TP63_motifs_0.1_sorted.bigbed2022-02-11 13:04 1.4M 
[ ]all_annotated_CRE_regions.bigBed2021-02-12 10:07 6.3M 
[ ]merged_ATAC_summits_200bp.bigBed2020-12-11 13:08 1.8M 
[ ]merged_ATAC_summits_1000bp.bed2020-12-10 17:56 3.0M 
[ ]merged_ATAC_summits_1000bp.bigBed2020-12-11 13:22 1.2M 
[ ]tmp_Dombi23ATAC1pk_new.bigNarrowPeak2020-12-01 13:46 1.2M 
[ ]tmp_KCpk.bigNarrowPeak2020-04-04 13:29 3.1M 
[ ]tmp_LSCpk.bigNarrowPeak2020-04-04 13:29 3.4M 
[ ]tmp_PRIMLSCATAC1pk_new.bigNarrowPeak2020-12-01 13:46 1.7M 
[TXT]trackDb.txt2023-06-22 15:44 16K 
[TXT]trackDb_RNA_chipBroad_works.txt2020-12-02 13:16 5.0K 
[TXT]trackDb_RNA_chipseq_works.txt2020-12-02 13:56 6.0K 
[TXT]trackDb_RNA_works.txt2020-12-01 15:47 3.2K 
[TXT]trackDb_s2s_backup.txt2020-12-01 13:50 12K