<?xml version='1.0' encoding='UTF-8' standalone='yes'?>
<!-- Document definition -->
<!DOCTYPE MEME[
<!ELEMENT MEME (
  training_set,
  model, 
  motifs, 
  scanned_sites_summary?
)>
<!ATTLIST MEME 
  version CDATA #REQUIRED
  release CDATA #REQUIRED
>
<!-- Training-set elements -->
<!ELEMENT training_set (alphabet, ambigs, sequence*, letter_frequencies)>
<!ATTLIST training_set primary_sequences CDATA #REQUIRED primary_count CDATA #REQUIRED primary_positions CDATA #REQUIRED
  control_sequences CDATA "" control_count CDATA "" control_positions CDATA "">
<!ELEMENT alphabet (letter*)>
<!ATTLIST alphabet name CDATA #REQUIRED>
<!ELEMENT ambigs (letter*)>
<!ELEMENT letter EMPTY>
<!ATTLIST letter id ID #REQUIRED>
<!ATTLIST letter symbol CDATA #REQUIRED>
<!ATTLIST letter equals CDATA #IMPLIED>
<!ATTLIST letter aliases CDATA #IMPLIED>
<!ATTLIST letter complement CDATA #IMPLIED>
<!ATTLIST letter name CDATA #IMPLIED>
<!ATTLIST letter colour CDATA #IMPLIED>
<!ELEMENT sequence EMPTY>
<!ATTLIST sequence id ID #REQUIRED
                   name CDATA #REQUIRED
                   length CDATA #REQUIRED
                   weight CDATA #REQUIRED
>
<!ELEMENT letter_frequencies (alphabet_array)>

<!-- Model elements -->
<!ELEMENT model (
  command_line,
  host,
  type,
  nmotifs,
  evalue_threshold,
  object_function,
  spfun,
  min_width,
  max_width,
  wg,
  ws,
  endgaps,
  minsites,
  maxsites,
  wnsites,
  spmap,
  spfuzz,
  prior,
  beta,
  maxiter,
  distance,
  num_positions,
  seed,
  hsfrac,
  searchsize,
  maxsize,
  norand,
  csites,
  strands,
  brief,
  psp_file,
  priors_file,
  reason_for_stopping,
  background_frequencies
)>
<!ELEMENT command_line (#PCDATA)*>
<!ELEMENT host (#PCDATA)*>
<!ELEMENT type (#PCDATA)*>
<!ELEMENT nmotifs (#PCDATA)*>
<!ELEMENT evalue_threshold (#PCDATA)*>
<!ELEMENT object_function (#PCDATA)*>
<!ELEMENT spfun (#PCDATA)*>
<!ELEMENT min_width (#PCDATA)*>
<!ELEMENT max_width (#PCDATA)*>
<!ELEMENT wg (#PCDATA)*>
<!ELEMENT ws (#PCDATA)*>
<!ELEMENT endgaps (#PCDATA)*>
<!ELEMENT minsites (#PCDATA)*>
<!ELEMENT maxsites (#PCDATA)*>
<!ELEMENT wnsites (#PCDATA)*>
<!ELEMENT spmap (#PCDATA)*>
<!ELEMENT spfuzz (#PCDATA)*>
<!ELEMENT prior (#PCDATA)*>
<!ELEMENT beta (#PCDATA)*>
<!ELEMENT maxiter (#PCDATA)*>
<!ELEMENT distance (#PCDATA)*>
<!ELEMENT num_positions (#PCDATA)*>
<!ELEMENT seed (#PCDATA)*>
<!ELEMENT hsfrac (#PCDATA)*>
<!ELEMENT searchsize (#PCDATA)*>
<!ELEMENT maxsize (#PCDATA)*>
<!ELEMENT norand (#PCDATA)*>
<!ELEMENT csites (#PCDATA)*>
<!ELEMENT strands (#PCDATA)*>
<!ELEMENT brief (#PCDATA)*>
<!ELEMENT psp_file (#PCDATA)*>
<!ELEMENT priors_file (#PCDATA)*>
<!ELEMENT reason_for_stopping (#PCDATA)*>
<!ELEMENT background_frequencies (alphabet_array)>
<!ATTLIST background_frequencies source CDATA #REQUIRED
		   order CDATA #REQUIRED>

<!-- Motif elements -->
<!ELEMENT motifs (motif*)>
<!ELEMENT motif (scores, probabilities, regular_expression?, contributing_sites)>
<!ATTLIST motif id ID #REQUIRED
                name CDATA #REQUIRED
                alt CDATA ""
                width CDATA #REQUIRED
                sites CDATA #REQUIRED
                ic CDATA #REQUIRED
                re CDATA #REQUIRED
                llr CDATA #REQUIRED
                p_value CDATA #REQUIRED
                e_value CDATA #REQUIRED
                bayes_threshold CDATA #REQUIRED
                elapsed_time CDATA #REQUIRED
                url CDATA ""
>
<!ELEMENT scores (alphabet_matrix)>
<!ELEMENT probabilities (alphabet_matrix)>
<!ELEMENT regular_expression (#PCDATA)*>

<!-- Contributing site elements -->
<!-- Contributing sites are motif occurences found during the motif discovery phase -->
<!ELEMENT contributing_sites (contributing_site*)>
<!ELEMENT contributing_site (left_flank, site, right_flank)>
<!ATTLIST contributing_site sequence_id IDREF #REQUIRED
                          position CDATA #REQUIRED
                          strand (plus|minus|none) 'none'
                          pvalue CDATA #REQUIRED
>
<!-- The left_flank contains the sequence for 10 bases to the left of the motif start -->
<!ELEMENT left_flank (#PCDATA)>
<!-- The site contains the sequence for the motif instance -->
<!ELEMENT site (letter_ref*)>
<!-- The right_flank contains the sequence for 10 bases to the right of the motif end -->
<!ELEMENT right_flank (#PCDATA)>

<!-- Scanned site elements -->
<!-- Scanned sites are motif occurences found during the sequence scan phase -->
<!ELEMENT scanned_sites_summary (scanned_sites*)>
<!ATTLIST scanned_sites_summary p_thresh CDATA #REQUIRED>
<!ELEMENT scanned_sites (scanned_site*)>
<!ATTLIST scanned_sites sequence_id IDREF #REQUIRED
                        pvalue CDATA #REQUIRED
                        num_sites CDATA #REQUIRED>
<!ELEMENT scanned_site EMPTY>
<!ATTLIST scanned_site  motif_id IDREF #REQUIRED
                        strand (plus|minus|none) 'none'
                        position CDATA #REQUIRED
                        pvalue CDATA #REQUIRED>

<!-- Utility elements -->
<!-- A reference to a letter in the alphabet -->
<!ELEMENT letter_ref EMPTY>
<!ATTLIST letter_ref letter_id IDREF #REQUIRED>
<!-- A alphabet-array contains one floating point value for each letter in an alphabet -->
<!ELEMENT alphabet_array (value*)>
<!ELEMENT value (#PCDATA)>
<!ATTLIST value letter_id IDREF #REQUIRED>

<!-- A alphabet_matrix contains one alphabet_array for each position in a motif -->
<!ELEMENT alphabet_matrix (alphabet_array*)>

]>
<!-- Begin document body -->
<MEME version="5.4.1" release="Sat Aug 21 19:23:23 2021 -0700">
<training_set primary_sequences="/scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/seqs-centered" primary_count="8677" primary_positions="867700" control_sequences="--none--" control_count="0" control_positions="0">
<alphabet name="DNA" like="dna">
<letter id="A" symbol="A" complement="T" name="Adenine" colour="CC0000"/>
<letter id="C" symbol="C" complement="G" name="Cytosine" colour="0000CC"/>
<letter id="G" symbol="G" complement="C" name="Guanine" colour="FFB300"/>
<letter id="T" symbol="T" aliases="U" complement="A" name="Thymine" colour="008000"/>
<letter id="N" symbol="N" aliases="X." equals="ACGT" name="Any base"/>
<letter id="V" symbol="V" equals="ACG" name="Not T"/>
<letter id="H" symbol="H" equals="ACT" name="Not G"/>
<letter id="D" symbol="D" equals="AGT" name="Not C"/>
<letter id="B" symbol="B" equals="CGT" name="Not A"/>
<letter id="M" symbol="M" equals="AC" name="Amino"/>
<letter id="R" symbol="R" equals="AG" name="Purine"/>
<letter id="W" symbol="W" equals="AT" name="Weak"/>
<letter id="S" symbol="S" equals="CG" name="Strong"/>
<letter id="Y" symbol="Y" equals="CT" name="Pyrimidine"/>
<letter id="K" symbol="K" equals="GT" name="Keto"/>
</alphabet>
<letter_frequencies>
<alphabet_array>
<value letter_id="A">0.185</value>
<value letter_id="C">0.315</value>
<value letter_id="G">0.315</value>
<value letter_id="T">0.185</value>
</alphabet_array>
</letter_frequencies>
</training_set>
<model>
<command_line>meme /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/seqs-centered -oc /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out -mod zoops -nmotifs 10 -minw 6 -maxw 15 -bfile /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background -dna -revcomp -nostatus </command_line>
<host>fv-az119-924</host>
<type>zoops</type>
<nmotifs>10</nmotifs>
<evalue_threshold>inf</evalue_threshold>
<object_function>E-value of product of p-values</object_function>
<spfun>E-value of product of p-values</spfun>
<min_width>6</min_width>
<max_width>15</max_width>
<wg>11</wg>
<ws>1</ws>
<endgaps>yes</endgaps>
<substring>yes</substring>
<minsites>2</minsites>
<maxsites>8677</maxsites>
<wnsites>0.8</wnsites>
<spmap>uni</spmap>
<spfuzz>0.5</spfuzz>
<prior>dirichlet</prior>
<beta>0.01</beta>
<maxiter>50</maxiter>
<distance>1e-05</distance>
<num_positions>867700</num_positions>
<seed>0</seed>
<hsfrac>0</hsfrac>
<searchsize>100000</searchsize>
<maxsize>0</maxsize>
<norand>no</norand>
<csites>1000</csites>
<strands>both</strands>
<brief>1000</brief>
<psp_file></psp_file>
<priors_file></priors_file>
<reason_for_stopping>Stopped because requested number of motifs (10) found.</reason_for_stopping>
<background_frequencies source="/scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background" order="2">
<alphabet_array>
<value letter_id="A">0.183</value>
<value letter_id="C">0.317</value>
<value letter_id="G">0.317</value>
<value letter_id="T">0.183</value>
</alphabet_array>
</background_frequencies>
</model>
<motifs>
<motif id="motif_1" name="AMWAAAAAWAHAAAA" alt="MEME-1" width="15" sites="1265" ic="13.3" re="18.4" llr="16091" p_value="1.8e-805" e_value="5.1e-285" bayes_threshold="11.0353" elapsed_time="302.823926">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">203</value>
<value letter_id="C">-389</value>
<value letter_id="G">-465</value>
<value letter_id="T">25</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">130</value>
<value letter_id="C">43</value>
<value letter_id="G">-212</value>
<value letter_id="T">-188</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">124</value>
<value letter_id="C">-209</value>
<value letter_id="G">-1695</value>
<value letter_id="T">143</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">201</value>
<value letter_id="C">-212</value>
<value letter_id="G">-165</value>
<value letter_id="T">-102</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">213</value>
<value letter_id="C">-258</value>
<value letter_id="G">-127</value>
<value letter_id="T">-386</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">216</value>
<value letter_id="C">-348</value>
<value letter_id="G">-279</value>
<value letter_id="T">-76</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">193</value>
<value letter_id="C">-240</value>
<value letter_id="G">-189</value>
<value letter_id="T">-20</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">210</value>
<value letter_id="C">-209</value>
<value letter_id="G">-227</value>
<value letter_id="T">-132</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">133</value>
<value letter_id="C">-197</value>
<value letter_id="G">-1695</value>
<value letter_id="T">132</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">210</value>
<value letter_id="C">-1695</value>
<value letter_id="G">-254</value>
<value letter_id="T">-18</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">105</value>
<value letter_id="C">10</value>
<value letter_id="G">-316</value>
<value letter_id="T">42</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">209</value>
<value letter_id="C">-197</value>
<value letter_id="G">-274</value>
<value letter_id="T">-101</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">225</value>
<value letter_id="C">-238</value>
<value letter_id="G">-1695</value>
<value letter_id="T">-138</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">220</value>
<value letter_id="C">-252</value>
<value letter_id="G">-303</value>
<value letter_id="T">-150</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">215</value>
<value letter_id="C">-1695</value>
<value letter_id="G">-1695</value>
<value letter_id="T">1</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.747826</value>
<value letter_id="C">0.021344</value>
<value letter_id="G">0.012648</value>
<value letter_id="T">0.218182</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.450593</value>
<value letter_id="C">0.426877</value>
<value letter_id="G">0.072727</value>
<value letter_id="T">0.049802</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.431621</value>
<value letter_id="C">0.074308</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.494071</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.735968</value>
<value letter_id="C">0.072727</value>
<value letter_id="G">0.101186</value>
<value letter_id="T">0.090119</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.803162</value>
<value letter_id="C">0.052964</value>
<value letter_id="G">0.131225</value>
<value letter_id="T">0.012648</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.817391</value>
<value letter_id="C">0.028458</value>
<value letter_id="G">0.045850</value>
<value letter_id="T">0.108300</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.695652</value>
<value letter_id="C">0.060079</value>
<value letter_id="G">0.085375</value>
<value letter_id="T">0.158893</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.786561</value>
<value letter_id="C">0.074308</value>
<value letter_id="G">0.065613</value>
<value letter_id="T">0.073518</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.460870</value>
<value letter_id="C">0.080632</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.458498</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.783399</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.054545</value>
<value letter_id="T">0.162055</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.378656</value>
<value letter_id="C">0.340711</value>
<value letter_id="G">0.035573</value>
<value letter_id="T">0.245059</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.781028</value>
<value letter_id="C">0.080632</value>
<value letter_id="G">0.047431</value>
<value letter_id="T">0.090909</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.868775</value>
<value letter_id="C">0.060870</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.070356</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.841107</value>
<value letter_id="C">0.055336</value>
<value letter_id="G">0.038735</value>
<value letter_id="T">0.064822</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.815020</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.184980</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[AT][AC][TA]AAAAA[AT]A[ACT]AAAA
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_2" name="CCTGTAATCCCAGCW" alt="MEME-2" width="15" sites="408" ic="25.6" re="26.1" llr="7378" p_value="4.7e-377" e_value="2.5e-166" bayes_threshold="12.7649" elapsed_time="540.254964">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-364</value>
<value letter_id="C">164</value>
<value letter_id="G">-1532</value>
<value letter_id="T">-1532</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1532</value>
<value letter_id="C">161</value>
<value letter_id="G">-1532</value>
<value letter_id="T">-252</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1532</value>
<value letter_id="C">-1532</value>
<value letter_id="G">-1532</value>
<value letter_id="T">245</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-158</value>
<value letter_id="C">-501</value>
<value letter_id="G">155</value>
<value letter_id="T">-1532</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1532</value>
<value letter_id="C">-384</value>
<value letter_id="G">-1532</value>
<value letter_id="T">242</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">242</value>
<value letter_id="C">-1532</value>
<value letter_id="G">-384</value>
<value letter_id="T">-1532</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">206</value>
<value letter_id="C">-1532</value>
<value letter_id="G">-43</value>
<value letter_id="T">-1532</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1532</value>
<value letter_id="C">-1532</value>
<value letter_id="G">-1532</value>
<value letter_id="T">245</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-464</value>
<value letter_id="C">160</value>
<value letter_id="G">-1532</value>
<value letter_id="T">-242</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1532</value>
<value letter_id="C">159</value>
<value letter_id="G">-1532</value>
<value letter_id="T">-190</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-390</value>
<value letter_id="C">154</value>
<value letter_id="G">-1532</value>
<value letter_id="T">-152</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">242</value>
<value letter_id="C">-1532</value>
<value letter_id="G">-421</value>
<value letter_id="T">-1532</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-147</value>
<value letter_id="C">-543</value>
<value letter_id="G">155</value>
<value letter_id="T">-1532</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1532</value>
<value letter_id="C">166</value>
<value letter_id="G">-1532</value>
<value letter_id="T">-1532</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">148</value>
<value letter_id="C">-1532</value>
<value letter_id="G">-1532</value>
<value letter_id="T">142</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.014706</value>
<value letter_id="C">0.985294</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.968137</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.031863</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.061275</value>
<value letter_id="C">0.009804</value>
<value letter_id="G">0.928922</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.022059</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.977941</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.977941</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.022059</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.764706</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.235294</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.007353</value>
<value letter_id="C">0.958333</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.034314</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.950980</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.049020</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.012255</value>
<value letter_id="C">0.924020</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.063725</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.982843</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.017157</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.066176</value>
<value letter_id="C">0.007353</value>
<value letter_id="G">0.926471</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">1.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.509804</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.490196</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
CCTGTA[AG]TCCCAGC[AT]
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_3" name="CCTCRGCCTCCCRAR" alt="MEME-3" width="15" sites="596" ic="21.5" re="20.4" llr="8432" p_value="1.5e-444" e_value="1.4e-152" bayes_threshold="12.0961" elapsed_time="776.733895">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-577</value>
<value letter_id="C">158</value>
<value letter_id="G">-756</value>
<value letter_id="T">-191</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-396</value>
<value letter_id="C">160</value>
<value letter_id="G">-1586</value>
<value letter_id="T">-277</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-360</value>
<value letter_id="C">-1586</value>
<value letter_id="G">-1586</value>
<value letter_id="T">243</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-677</value>
<value letter_id="C">138</value>
<value letter_id="G">-424</value>
<value letter_id="T">-22</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">152</value>
<value letter_id="C">-195</value>
<value letter_id="G">10</value>
<value letter_id="T">-177</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-156</value>
<value letter_id="C">-1586</value>
<value letter_id="G">157</value>
<value letter_id="T">-1586</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-577</value>
<value letter_id="C">161</value>
<value letter_id="G">-756</value>
<value letter_id="T">-286</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-677</value>
<value letter_id="C">163</value>
<value letter_id="G">-756</value>
<value letter_id="T">-360</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-377</value>
<value letter_id="C">-475</value>
<value letter_id="G">-656</value>
<value letter_id="T">241</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1586</value>
<value letter_id="C">161</value>
<value letter_id="G">-656</value>
<value letter_id="T">-252</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-360</value>
<value letter_id="C">155</value>
<value letter_id="G">-475</value>
<value letter_id="T">-207</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-296</value>
<value letter_id="C">132</value>
<value letter_id="G">-424</value>
<value letter_id="T">-11</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">176</value>
<value letter_id="C">-756</value>
<value letter_id="G">16</value>
<value letter_id="T">-286</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">217</value>
<value letter_id="C">-456</value>
<value letter_id="G">-96</value>
<value letter_id="T">-1586</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">137</value>
<value letter_id="C">-475</value>
<value letter_id="G">69</value>
<value letter_id="T">-577</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.003356</value>
<value letter_id="C">0.946309</value>
<value letter_id="G">0.001678</value>
<value letter_id="T">0.048658</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.011745</value>
<value letter_id="C">0.961409</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.026846</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.015101</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.984899</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.001678</value>
<value letter_id="C">0.823826</value>
<value letter_id="G">0.016779</value>
<value letter_id="T">0.157718</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.523490</value>
<value letter_id="C">0.082215</value>
<value letter_id="G">0.340604</value>
<value letter_id="T">0.053691</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.062081</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.937919</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.003356</value>
<value letter_id="C">0.969799</value>
<value letter_id="G">0.001678</value>
<value letter_id="T">0.025168</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.001678</value>
<value letter_id="C">0.981544</value>
<value letter_id="G">0.001678</value>
<value letter_id="T">0.015101</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.013423</value>
<value letter_id="C">0.011745</value>
<value letter_id="G">0.003356</value>
<value letter_id="T">0.971477</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.964765</value>
<value letter_id="G">0.003356</value>
<value letter_id="T">0.031879</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.015101</value>
<value letter_id="C">0.929530</value>
<value letter_id="G">0.011745</value>
<value letter_id="T">0.043624</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.023490</value>
<value letter_id="C">0.790268</value>
<value letter_id="G">0.016779</value>
<value letter_id="T">0.169463</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.619128</value>
<value letter_id="C">0.001678</value>
<value letter_id="G">0.354027</value>
<value letter_id="T">0.025168</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.823826</value>
<value letter_id="C">0.013423</value>
<value letter_id="G">0.162752</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.474832</value>
<value letter_id="C">0.011745</value>
<value letter_id="G">0.510067</value>
<value letter_id="T">0.003356</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
CCTC[AG]GCCTCCC[AG]A[GA]
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_4" name="CCAGCCTGGSCAACA" alt="MEME-4" width="15" sites="435" ic="22.4" re="21.7" llr="6539" p_value="2.1e-327" e_value="7.7e-103" bayes_threshold="12.3984" elapsed_time="1010.174746">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-399</value>
<value letter_id="C">154</value>
<value letter_id="G">-394</value>
<value letter_id="T">-192</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-431</value>
<value letter_id="C">155</value>
<value letter_id="G">-552</value>
<value letter_id="T">-173</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">242</value>
<value letter_id="C">-710</value>
<value letter_id="G">-430</value>
<value letter_id="T">-1541</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-273</value>
<value letter_id="C">-430</value>
<value letter_id="G">141</value>
<value letter_id="T">-70</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1541</value>
<value letter_id="C">159</value>
<value letter_id="G">-411</value>
<value letter_id="T">-261</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-531</value>
<value letter_id="C">159</value>
<value letter_id="G">-710</value>
<value letter_id="T">-215</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1541</value>
<value letter_id="C">-411</value>
<value letter_id="G">-610</value>
<value letter_id="T">242</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-151</value>
<value letter_id="C">-1541</value>
<value letter_id="G">156</value>
<value letter_id="T">-631</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-56</value>
<value letter_id="C">-511</value>
<value letter_id="G">143</value>
<value letter_id="T">-373</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-315</value>
<value letter_id="C">45</value>
<value letter_id="G">73</value>
<value letter_id="T">-299</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-431</value>
<value letter_id="C">121</value>
<value letter_id="G">-430</value>
<value letter_id="T">40</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">202</value>
<value letter_id="C">-1541</value>
<value letter_id="G">-33</value>
<value letter_id="T">-631</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">244</value>
<value letter_id="C">-552</value>
<value letter_id="G">-1541</value>
<value letter_id="T">-1541</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-332</value>
<value letter_id="C">154</value>
<value letter_id="G">-610</value>
<value letter_id="T">-173</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">241</value>
<value letter_id="C">-710</value>
<value letter_id="G">-365</value>
<value letter_id="T">-1541</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.011494</value>
<value letter_id="C">0.919540</value>
<value letter_id="G">0.020690</value>
<value letter_id="T">0.048276</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.009195</value>
<value letter_id="C">0.928736</value>
<value letter_id="G">0.006897</value>
<value letter_id="T">0.055172</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.981609</value>
<value letter_id="C">0.002299</value>
<value letter_id="G">0.016092</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.027586</value>
<value letter_id="C">0.016092</value>
<value letter_id="G">0.843678</value>
<value letter_id="T">0.112644</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.951724</value>
<value letter_id="G">0.018391</value>
<value letter_id="T">0.029885</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.004598</value>
<value letter_id="C">0.951724</value>
<value letter_id="G">0.002299</value>
<value letter_id="T">0.041379</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.018391</value>
<value letter_id="G">0.004598</value>
<value letter_id="T">0.977011</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.064368</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.933333</value>
<value letter_id="T">0.002299</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.124138</value>
<value letter_id="C">0.009195</value>
<value letter_id="G">0.852874</value>
<value letter_id="T">0.013793</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.020690</value>
<value letter_id="C">0.432184</value>
<value letter_id="G">0.524138</value>
<value letter_id="T">0.022989</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.009195</value>
<value letter_id="C">0.733333</value>
<value letter_id="G">0.016092</value>
<value letter_id="T">0.241379</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.744828</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.252874</value>
<value letter_id="T">0.002299</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.993103</value>
<value letter_id="C">0.006897</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.018391</value>
<value letter_id="C">0.921839</value>
<value letter_id="G">0.004598</value>
<value letter_id="T">0.055172</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.972414</value>
<value letter_id="C">0.002299</value>
<value letter_id="G">0.025287</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
CCAGCCTGG[GC][CT][AG]ACA
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_5" name="AGGTCAGGAGTTCGA" alt="MEME-5" width="15" sites="280" ic="22.3" re="23.1" llr="4484" p_value="3.7e-253" e_value="3.3e-081" bayes_threshold="13.1586" elapsed_time="1242.247719">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">241</value>
<value letter_id="C">-447</value>
<value letter_id="G">-647</value>
<value letter_id="T">-409</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-168</value>
<value letter_id="C">-488</value>
<value letter_id="G">155</value>
<value letter_id="T">-568</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-251</value>
<value letter_id="C">-101</value>
<value letter_id="G">132</value>
<value letter_id="T">-336</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-568</value>
<value letter_id="C">-45</value>
<value letter_id="G">-1477</value>
<value letter_id="T">206</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-368</value>
<value letter_id="C">162</value>
<value letter_id="G">-547</value>
<value letter_id="T">-468</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">238</value>
<value letter_id="C">-1477</value>
<value letter_id="G">-277</value>
<value letter_id="T">-568</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-159</value>
<value letter_id="C">-547</value>
<value letter_id="G">155</value>
<value letter_id="T">-568</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-187</value>
<value letter_id="C">-389</value>
<value letter_id="G">153</value>
<value letter_id="T">-409</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">234</value>
<value letter_id="C">-488</value>
<value letter_id="G">-289</value>
<value letter_id="T">-336</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-268</value>
<value letter_id="C">-547</value>
<value letter_id="G">161</value>
<value letter_id="T">-1477</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">25</value>
<value letter_id="C">-547</value>
<value letter_id="G">-1477</value>
<value letter_id="T">208</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1477</value>
<value letter_id="C">-647</value>
<value letter_id="G">-1477</value>
<value letter_id="T">244</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-568</value>
<value letter_id="C">113</value>
<value letter_id="G">-366</value>
<value letter_id="T">61</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">64</value>
<value letter_id="C">-415</value>
<value letter_id="G">114</value>
<value letter_id="T">-1477</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">241</value>
<value letter_id="C">-647</value>
<value letter_id="G">-389</value>
<value letter_id="T">-1477</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.971429</value>
<value letter_id="C">0.014286</value>
<value letter_id="G">0.003571</value>
<value letter_id="T">0.010714</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.057143</value>
<value letter_id="C">0.010714</value>
<value letter_id="G">0.928571</value>
<value letter_id="T">0.003571</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.032143</value>
<value letter_id="C">0.157143</value>
<value letter_id="G">0.792857</value>
<value letter_id="T">0.017857</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.003571</value>
<value letter_id="C">0.232143</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.764286</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.014286</value>
<value letter_id="C">0.971429</value>
<value letter_id="G">0.007143</value>
<value letter_id="T">0.007143</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.950000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.046429</value>
<value letter_id="T">0.003571</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.060714</value>
<value letter_id="C">0.007143</value>
<value letter_id="G">0.928571</value>
<value letter_id="T">0.003571</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.050000</value>
<value letter_id="C">0.021429</value>
<value letter_id="G">0.917857</value>
<value letter_id="T">0.010714</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.928571</value>
<value letter_id="C">0.010714</value>
<value letter_id="G">0.042857</value>
<value letter_id="T">0.017857</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.028571</value>
<value letter_id="C">0.007143</value>
<value letter_id="G">0.964286</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.217857</value>
<value letter_id="C">0.007143</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.775000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.003571</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.996429</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.003571</value>
<value letter_id="C">0.692857</value>
<value letter_id="G">0.025000</value>
<value letter_id="T">0.278571</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.285714</value>
<value letter_id="C">0.017857</value>
<value letter_id="G">0.696429</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.975000</value>
<value letter_id="C">0.003571</value>
<value letter_id="G">0.021429</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
AGG[TC]CAGGAG[TA]T[CT][GA]A
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_6" name="GYGARACCCYGTCTC" alt="MEME-6" width="15" sites="431" ic="19.2" re="19.2" llr="5748" p_value="3.3e-311" e_value="1.6e-069" bayes_threshold="12.7043" elapsed_time="1471.935915">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-313</value>
<value letter_id="C">-429</value>
<value letter_id="G">160</value>
<value letter_id="T">-1540</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-126</value>
<value letter_id="C">14</value>
<value letter_id="G">-1540</value>
<value letter_id="T">165</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">44</value>
<value letter_id="C">-1540</value>
<value letter_id="G">125</value>
<value letter_id="T">-1540</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">203</value>
<value letter_id="C">-75</value>
<value letter_id="G">-551</value>
<value letter_id="T">-172</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">157</value>
<value letter_id="C">-1540</value>
<value letter_id="G">52</value>
<value letter_id="T">-1540</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">243</value>
<value letter_id="C">-1540</value>
<value letter_id="G">-477</value>
<value letter_id="T">-1540</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-349</value>
<value letter_id="C">120</value>
<value letter_id="G">-1540</value>
<value letter_id="T">48</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-398</value>
<value letter_id="C">126</value>
<value letter_id="G">-1540</value>
<value letter_id="T">33</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-272</value>
<value letter_id="C">116</value>
<value letter_id="G">-1540</value>
<value letter_id="T">53</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-398</value>
<value letter_id="C">99</value>
<value letter_id="G">-551</value>
<value letter_id="T">95</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">77</value>
<value letter_id="C">-609</value>
<value letter_id="G">109</value>
<value letter_id="T">-430</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-372</value>
<value letter_id="C">-509</value>
<value letter_id="G">-44</value>
<value letter_id="T">202</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1540</value>
<value letter_id="C">164</value>
<value letter_id="G">-1540</value>
<value letter_id="T">-398</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1540</value>
<value letter_id="C">-509</value>
<value letter_id="G">-1540</value>
<value letter_id="T">244</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-330</value>
<value letter_id="C">159</value>
<value letter_id="G">-1540</value>
<value letter_id="T">-260</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.020882</value>
<value letter_id="C">0.016241</value>
<value letter_id="G">0.962877</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.076566</value>
<value letter_id="C">0.350348</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.573086</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.248260</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.751740</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.749420</value>
<value letter_id="C">0.187935</value>
<value letter_id="G">0.006961</value>
<value letter_id="T">0.055684</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.545244</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.454756</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.988399</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.011601</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.016241</value>
<value letter_id="C">0.728538</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.255220</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.011601</value>
<value letter_id="C">0.758701</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.229698</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.027842</value>
<value letter_id="C">0.707657</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.264501</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.011601</value>
<value letter_id="C">0.628770</value>
<value letter_id="G">0.006961</value>
<value letter_id="T">0.352668</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.313225</value>
<value letter_id="C">0.004640</value>
<value letter_id="G">0.672854</value>
<value letter_id="T">0.009281</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.013921</value>
<value letter_id="C">0.009281</value>
<value letter_id="G">0.234339</value>
<value letter_id="T">0.742459</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.988399</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.011601</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.009281</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.990719</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.018561</value>
<value letter_id="C">0.951276</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.030162</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
G[TC][GA]A[AG]A[CT][CT][CT][CT][GA][TG]CTC
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_7" name="TRGCYRGGCRTGGTG" alt="MEME-7" width="15" sites="355" ic="21.0" re="19.7" llr="4853" p_value="2.8e-262" e_value="5.1e-062" bayes_threshold="12.9151" elapsed_time="1699.938034">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">7</value>
<value letter_id="C">-257</value>
<value letter_id="G">-281</value>
<value letter_id="T">195</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">182</value>
<value letter_id="C">-1512</value>
<value letter_id="G">16</value>
<value letter_id="T">-1512</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-321</value>
<value letter_id="C">-1512</value>
<value letter_id="G">163</value>
<value letter_id="T">-1512</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-402</value>
<value letter_id="C">160</value>
<value letter_id="G">-481</value>
<value letter_id="T">-344</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1512</value>
<value letter_id="C">107</value>
<value letter_id="G">-1512</value>
<value letter_id="T">87</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">84</value>
<value letter_id="C">-523</value>
<value letter_id="G">99</value>
<value letter_id="T">-244</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-244</value>
<value letter_id="C">-1512</value>
<value letter_id="G">160</value>
<value letter_id="T">-502</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-202</value>
<value letter_id="C">-523</value>
<value letter_id="G">156</value>
<value letter_id="T">-402</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1512</value>
<value letter_id="C">123</value>
<value letter_id="G">-1512</value>
<value letter_id="T">50</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">90</value>
<value letter_id="C">-1512</value>
<value letter_id="G">102</value>
<value letter_id="T">-344</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1512</value>
<value letter_id="C">-18</value>
<value letter_id="G">-1512</value>
<value letter_id="T">198</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-56</value>
<value letter_id="C">-1512</value>
<value letter_id="G">147</value>
<value letter_id="T">-1512</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-232</value>
<value letter_id="C">-1512</value>
<value letter_id="G">160</value>
<value letter_id="T">-1512</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1512</value>
<value letter_id="C">-1512</value>
<value letter_id="G">-1512</value>
<value letter_id="T">245</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-302</value>
<value letter_id="C">-1512</value>
<value letter_id="G">162</value>
<value letter_id="T">-1512</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.191549</value>
<value letter_id="C">0.053521</value>
<value letter_id="G">0.045070</value>
<value letter_id="T">0.709859</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.645070</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.354930</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.019718</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.980282</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.011268</value>
<value letter_id="C">0.960563</value>
<value letter_id="G">0.011268</value>
<value letter_id="T">0.016901</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.664789</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.335211</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.326761</value>
<value letter_id="C">0.008451</value>
<value letter_id="G">0.630986</value>
<value letter_id="T">0.033803</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.033803</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.960563</value>
<value letter_id="T">0.005634</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.045070</value>
<value letter_id="C">0.008451</value>
<value letter_id="G">0.935211</value>
<value letter_id="T">0.011268</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.740845</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.259155</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.340845</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.642254</value>
<value letter_id="T">0.016901</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.278873</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.721127</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.123944</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.876056</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.036620</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.963380</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.022535</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.977465</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
T[AG]GC[CT][GA]GG[CT][GA][TC]GGTG
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_8" name="CRGGAGRATCRCTTG" alt="MEME-8" width="15" sites="448" ic="18.0" re="18.4" llr="5726" p_value="1.6e-221" e_value="3.7e-053" bayes_threshold="12.661" elapsed_time="1926.866423">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-204</value>
<value letter_id="C">119</value>
<value letter_id="G">-515</value>
<value letter_id="T">29</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">171</value>
<value letter_id="C">-415</value>
<value letter_id="G">16</value>
<value letter_id="T">-277</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-183</value>
<value letter_id="C">-256</value>
<value letter_id="G">148</value>
<value letter_id="T">-377</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-93</value>
<value letter_id="C">-290</value>
<value letter_id="G">144</value>
<value letter_id="T">-636</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">168</value>
<value letter_id="C">-55</value>
<value letter_id="G">-515</value>
<value letter_id="T">5</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-4</value>
<value letter_id="C">-515</value>
<value letter_id="G">134</value>
<value letter_id="T">-436</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">120</value>
<value letter_id="C">-615</value>
<value letter_id="G">84</value>
<value letter_id="T">-477</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">240</value>
<value letter_id="C">-456</value>
<value letter_id="G">-456</value>
<value letter_id="T">-536</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-477</value>
<value letter_id="C">-263</value>
<value letter_id="G">-515</value>
<value letter_id="T">235</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-336</value>
<value letter_id="C">125</value>
<value letter_id="G">-345</value>
<value letter_id="T">12</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">171</value>
<value letter_id="C">-515</value>
<value letter_id="G">26</value>
<value letter_id="T">-404</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-536</value>
<value letter_id="C">156</value>
<value letter_id="G">-483</value>
<value letter_id="T">-197</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-436</value>
<value letter_id="C">-29</value>
<value letter_id="G">-615</value>
<value letter_id="T">199</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1545</value>
<value letter_id="C">-345</value>
<value letter_id="G">-556</value>
<value letter_id="T">240</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-204</value>
<value letter_id="C">-556</value>
<value letter_id="G">152</value>
<value letter_id="T">-219</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.044643</value>
<value letter_id="C">0.723214</value>
<value letter_id="G">0.008929</value>
<value letter_id="T">0.223214</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.600446</value>
<value letter_id="C">0.017857</value>
<value letter_id="G">0.354911</value>
<value letter_id="T">0.026786</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.051339</value>
<value letter_id="C">0.053571</value>
<value letter_id="G">0.881696</value>
<value letter_id="T">0.013393</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.095982</value>
<value letter_id="C">0.042411</value>
<value letter_id="G">0.859375</value>
<value letter_id="T">0.002232</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.584821</value>
<value letter_id="C">0.216518</value>
<value letter_id="G">0.008929</value>
<value letter_id="T">0.189732</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.178571</value>
<value letter_id="C">0.008929</value>
<value letter_id="G">0.803571</value>
<value letter_id="T">0.008929</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.419643</value>
<value letter_id="C">0.004464</value>
<value letter_id="G">0.569196</value>
<value letter_id="T">0.006696</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.968750</value>
<value letter_id="C">0.013393</value>
<value letter_id="G">0.013393</value>
<value letter_id="T">0.004464</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.006696</value>
<value letter_id="C">0.051339</value>
<value letter_id="G">0.008929</value>
<value letter_id="T">0.933036</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.017857</value>
<value letter_id="C">0.754464</value>
<value letter_id="G">0.029018</value>
<value letter_id="T">0.198661</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.600446</value>
<value letter_id="C">0.008929</value>
<value letter_id="G">0.379464</value>
<value letter_id="T">0.011161</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.004464</value>
<value letter_id="C">0.937500</value>
<value letter_id="G">0.011161</value>
<value letter_id="T">0.046875</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.008929</value>
<value letter_id="C">0.258929</value>
<value letter_id="G">0.004464</value>
<value letter_id="T">0.727679</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.029018</value>
<value letter_id="G">0.006696</value>
<value letter_id="T">0.964286</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.044643</value>
<value letter_id="C">0.006696</value>
<value letter_id="G">0.908482</value>
<value letter_id="T">0.040179</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[CT][AG]GG[AC]G[GA]ATC[AG]C[TC]TG
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_9" name="ACTGCAACCTCCRCC" alt="MEME-9" width="15" sites="99" ic="25.3" re="24.6" llr="1691" p_value="2.8e-092" e_value="7.0e-018" bayes_threshold="14.7977" elapsed_time="2154.143215">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">245</value>
<value letter_id="C">-1327</value>
<value letter_id="G">-1327</value>
<value letter_id="T">-1327</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1327</value>
<value letter_id="C">166</value>
<value letter_id="G">-1327</value>
<value letter_id="T">-1327</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1327</value>
<value letter_id="C">-339</value>
<value letter_id="G">-1327</value>
<value letter_id="T">240</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1327</value>
<value letter_id="C">-397</value>
<value letter_id="G">163</value>
<value letter_id="T">-1327</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1327</value>
<value letter_id="C">166</value>
<value letter_id="G">-1327</value>
<value letter_id="T">-1327</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">245</value>
<value letter_id="C">-1327</value>
<value letter_id="G">-1327</value>
<value letter_id="T">-1327</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">221</value>
<value letter_id="C">-1327</value>
<value letter_id="G">-106</value>
<value letter_id="T">-1327</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1327</value>
<value letter_id="C">140</value>
<value letter_id="G">-97</value>
<value letter_id="T">-1327</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-418</value>
<value letter_id="C">155</value>
<value letter_id="G">-1327</value>
<value letter_id="T">-159</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1327</value>
<value letter_id="C">-1327</value>
<value letter_id="G">-1327</value>
<value letter_id="T">245</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1327</value>
<value letter_id="C">166</value>
<value letter_id="G">-1327</value>
<value letter_id="T">-1327</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1327</value>
<value letter_id="C">114</value>
<value letter_id="G">-497</value>
<value letter_id="T">68</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">91</value>
<value letter_id="C">-1327</value>
<value letter_id="G">105</value>
<value letter_id="T">-1327</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1327</value>
<value letter_id="C">157</value>
<value letter_id="G">-1327</value>
<value letter_id="T">-159</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-418</value>
<value letter_id="C">150</value>
<value letter_id="G">-1327</value>
<value letter_id="T">-101</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">1.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">1.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.030303</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.969697</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.020202</value>
<value letter_id="G">0.979798</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">1.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">1.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.848485</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.151515</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.838384</value>
<value letter_id="G">0.161616</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.010101</value>
<value letter_id="C">0.929293</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.060606</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">1.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.696970</value>
<value letter_id="G">0.010101</value>
<value letter_id="T">0.292929</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.343434</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.656566</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.939394</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.060606</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.010101</value>
<value letter_id="C">0.898990</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.090909</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
ACTGCAACCTC[CT][GA]CC
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_10" name="GTGCAGTGGCRCGA" alt="MEME-10" width="14" sites="75" ic="22.8" re="22.1" llr="1151" p_value="1.7e-096" e_value="4.2e-011" bayes_threshold="14.7289" elapsed_time="2380.727555">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-1287</value>
<value letter_id="C">-1287</value>
<value letter_id="G">164</value>
<value letter_id="T">-378</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1287</value>
<value letter_id="C">-1287</value>
<value letter_id="G">-457</value>
<value letter_id="T">243</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1287</value>
<value letter_id="C">-1287</value>
<value letter_id="G">166</value>
<value letter_id="T">-1287</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1287</value>
<value letter_id="C">166</value>
<value letter_id="G">-1287</value>
<value letter_id="T">-1287</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">245</value>
<value letter_id="C">-1287</value>
<value letter_id="G">-1287</value>
<value letter_id="T">-1287</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-61</value>
<value letter_id="C">-1287</value>
<value letter_id="G">147</value>
<value letter_id="T">-1287</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1287</value>
<value letter_id="C">-1287</value>
<value letter_id="G">-1287</value>
<value letter_id="T">245</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1287</value>
<value letter_id="C">-1287</value>
<value letter_id="G">164</value>
<value letter_id="T">-378</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1287</value>
<value letter_id="C">-1287</value>
<value letter_id="G">166</value>
<value letter_id="T">-1287</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1287</value>
<value letter_id="C">136</value>
<value letter_id="G">-1287</value>
<value letter_id="T">3</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">103</value>
<value letter_id="C">-357</value>
<value letter_id="G">92</value>
<value letter_id="T">-1287</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1287</value>
<value letter_id="C">104</value>
<value letter_id="G">-298</value>
<value letter_id="T">74</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">13</value>
<value letter_id="C">-157</value>
<value letter_id="G">98</value>
<value letter_id="T">-146</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">245</value>
<value letter_id="C">-1287</value>
<value letter_id="G">-1287</value>
<value letter_id="T">-1287</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.986667</value>
<value letter_id="T">0.013333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.013333</value>
<value letter_id="T">0.986667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">1.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">1.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">1.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.120000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.880000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.986667</value>
<value letter_id="T">0.013333</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">1.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.813333</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.186667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.373333</value>
<value letter_id="C">0.026667</value>
<value letter_id="G">0.600000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.653333</value>
<value letter_id="G">0.040000</value>
<value letter_id="T">0.306667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.200000</value>
<value letter_id="C">0.106667</value>
<value letter_id="G">0.626667</value>
<value letter_id="T">0.066667</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">1.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
GTGCAGTGGC[GA][CT][GA]A
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
</motifs>
</MEME>
