******************************************************************************** STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation ******************************************************************************** MEME version 5.4.1 (Release date: Sat Aug 21 19:23:23 2021 -0700) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey, "STREME: accurate and versatile sequence motif discovery", Bioinformatics, Mar. 24, 2021. ******************************************************************************** ALPHABET= ACGT strands: + - Background letter frequencies A 0.214 C 0.286 G 0.286 T 0.214 MOTIF 1-CTCRGCCTCCYRA STREME-1 letter-probability matrix: alength= 4 w= 13 nsites= 1661 E= 3.3e-040 0.000021 0.965513 0.002305 0.032162 0.000021 0.000028 0.003362 0.996590 0.004689 0.798640 0.004973 0.191698 0.527607 0.012699 0.413865 0.045829 0.285761 0.004696 0.706856 0.002688 0.213603 0.727491 0.005815 0.053091 0.000021 0.967366 0.000694 0.031919 0.000021 0.000028 0.000028 0.999924 0.004689 0.959639 0.000028 0.035644 0.003632 0.962837 0.003362 0.030170 0.027365 0.584294 0.004973 0.383368 0.472778 0.018978 0.495551 0.012692 0.849822 0.014035 0.136122 0.000021 MOTIF 2-CCTGTAATCCCAGCW STREME-2 letter-probability matrix: alength= 4 w= 15 nsites= 1340 E= 2.5e-035 0.013234 0.930568 0.018196 0.038002 0.004979 0.940473 0.009115 0.045433 0.009106 0.017371 0.005813 0.967710 0.094147 0.007464 0.894236 0.004153 0.002502 0.017371 0.012417 0.967710 0.943763 0.005813 0.042143 0.008281 0.752887 0.005813 0.233019 0.008281 0.000851 0.028930 0.002511 0.967708 0.008281 0.937171 0.008290 0.046259 0.008281 0.922310 0.008290 0.061119 0.002502 0.930561 0.003336 0.063601 0.970187 0.002511 0.017370 0.009932 0.061122 0.015719 0.916529 0.006630 0.016536 0.930568 0.012417 0.040478 0.479899 0.007464 0.006638 0.505999 MOTIF 3-GGAGRATCRCTTGAR STREME-3 letter-probability matrix: alength= 4 w= 15 nsites= 1076 E= 3.1e-034 0.077483 0.020976 0.882670 0.018871 0.072249 0.010509 0.917210 0.000032 0.626143 0.179043 0.013649 0.181165 0.142396 0.006323 0.834503 0.016778 0.434585 0.004230 0.554874 0.006312 0.967437 0.008416 0.022022 0.002125 0.005265 0.022022 0.001090 0.971623 0.016778 0.705711 0.050289 0.227222 0.520359 0.020975 0.433515 0.025151 0.005265 0.946516 0.012602 0.035616 0.013639 0.223045 0.028310 0.735006 0.001079 0.004230 0.003183 0.991509 0.028290 0.009463 0.953842 0.008405 0.988369 0.000043 0.009462 0.002125 0.436676 0.005276 0.555923 0.002125 MOTIF 4-CCAGCCTGGSCAACA STREME-4 letter-probability matrix: alength= 4 w= 15 nsites= 1243 E= 1.2e-033 0.011143 0.940271 0.013640 0.034946 0.010771 0.944396 0.000037 0.044796 0.982888 0.001828 0.006304 0.008981 0.025097 0.011676 0.878103 0.085124 0.006295 0.949770 0.011676 0.032259 0.009876 0.947978 0.000932 0.041213 0.004504 0.001828 0.000932 0.992736 0.040318 0.003618 0.947083 0.008981 0.100339 0.001828 0.890644 0.007190 0.042108 0.433546 0.511783 0.012562 0.019725 0.740046 0.006304 0.233925 0.743608 0.004514 0.245583 0.006295 0.970353 0.000037 0.025106 0.004504 0.011667 0.908206 0.018839 0.061287 0.962295 0.004514 0.027792 0.005399 MOTIF 5-ACCCYRTCTCTA STREME-5 letter-probability matrix: alength= 4 w= 12 nsites= 1107 E= 2.3e-021 0.983411 0.014542 0.000041 0.002006 0.027693 0.927320 0.002017 0.042970 0.004392 0.702859 0.004980 0.287769 0.005958 0.898618 0.003004 0.092420 0.005958 0.628623 0.002017 0.363402 0.361706 0.006956 0.615090 0.016248 0.009909 0.008764 0.000041 0.981286 0.009909 0.945196 0.008932 0.035962 0.004970 0.010908 0.003992 0.980130 0.002006 0.952937 0.016836 0.028221 0.288391 0.030213 0.005968 0.675428 0.978322 0.010330 0.006378 0.004970 MOTIF 6-CRTGAGCCACCR STREME-6 letter-probability matrix: alength= 4 w= 12 nsites= 786 E= 1.1e-017 0.003156 0.787316 0.015605 0.193923 0.454201 0.000064 0.536362 0.009372 0.000048 0.020268 0.000064 0.979620 0.032683 0.010942 0.954773 0.001602 0.747556 0.105696 0.000064 0.146683 0.089781 0.004726 0.868146 0.037347 0.000048 0.985853 0.000064 0.014034 0.003156 0.968460 0.003172 0.025212 0.992054 0.000064 0.007834 0.000048 0.000048 0.985209 0.000064 0.014679 0.003801 0.766663 0.010942 0.218594 0.510183 0.032701 0.430004 0.027112 MOTIF 7-GCAGTGAGCCRAGAT STREME-7 letter-probability matrix: alength= 4 w= 15 nsites= 542 E= 1.5e-015 0.042272 0.007549 0.942657 0.007523 0.000077 0.947620 0.000103 0.052201 0.942628 0.002585 0.047265 0.007523 0.029862 0.005067 0.962513 0.002559 0.007523 0.008579 0.010031 0.973868 0.019933 0.000103 0.969960 0.010005 0.992272 0.000103 0.002585 0.005041 0.044754 0.002585 0.950103 0.002559 0.002559 0.974924 0.000103 0.022415 0.022418 0.716541 0.014995 0.246046 0.400874 0.007549 0.584055 0.007523 0.863197 0.012513 0.012513 0.111777 0.019933 0.014995 0.962513 0.002559 0.982344 0.000103 0.007549 0.010005 0.005041 0.042299 0.000103 0.952558 MOTIF 8-AGTGCAGTGGCRCR STREME-8 letter-probability matrix: alength= 4 w= 14 nsites= 516 E= 3.2e-015 0.952756 0.002225 0.038544 0.006475 0.036385 0.023589 0.939960 0.000066 0.008612 0.008634 0.000088 0.982666 0.035136 0.006498 0.954028 0.004339 0.012884 0.957051 0.000088 0.029976 0.984803 0.002225 0.012907 0.000066 0.153902 0.008634 0.833125 0.004339 0.000066 0.012907 0.004361 0.982666 0.027840 0.000088 0.969870 0.002202 0.053477 0.002225 0.942096 0.002202 0.005225 0.727534 0.000088 0.267152 0.409114 0.029999 0.525752 0.035136 0.017158 0.668583 0.008634 0.305625 0.311695 0.066322 0.592007 0.029976 MOTIF 9-AAAATTAGCYRGGCR STREME-9 letter-probability matrix: alength= 4 w= 15 nsites= 758 E= 2.9e-013 0.970586 0.010297 0.011760 0.007357 0.970586 0.016147 0.007372 0.005895 0.963274 0.014684 0.008835 0.013207 0.950112 0.013222 0.020534 0.016132 0.009427 0.010297 0.011760 0.968517 0.004432 0.024921 0.016147 0.954500 0.980823 0.007372 0.010297 0.001507 0.026368 0.021997 0.920880 0.030756 0.005895 0.957440 0.005910 0.030756 0.016132 0.567680 0.002985 0.413203 0.342375 0.008835 0.623884 0.024907 0.071705 0.002985 0.913566 0.011744 0.049768 0.008835 0.934040 0.007357 0.020519 0.647328 0.010297 0.321856 0.383343 0.017609 0.577067 0.021981 MOTIF 10-AAAAATACA STREME-10 letter-probability matrix: alength= 4 w= 9 nsites= 534 E= 2.1e-009 0.928518 0.026027 0.026027 0.019427 0.928518 0.026027 0.026027 0.019427 0.928518 0.026027 0.026027 0.019427 0.928518 0.026027 0.026027 0.019427 0.928518 0.026027 0.026027 0.019427 0.019427 0.026027 0.026027 0.928518 0.928518 0.026027 0.026027 0.019427 0.019427 0.935118 0.026027 0.019427 0.928518 0.026027 0.026027 0.019427 MOTIF 11-AACCTCCGCCTCCCR STREME-11 letter-probability matrix: alength= 4 w= 15 nsites= 292 E= 3.8e-008 0.902991 0.050634 0.030896 0.015479 0.873499 0.030896 0.064742 0.030864 0.021633 0.836593 0.104756 0.037018 0.000095 0.947375 0.003204 0.049326 0.027787 0.040127 0.021665 0.910421 0.006249 0.959684 0.018588 0.015479 0.037017 0.807638 0.018588 0.136756 0.240131 0.027819 0.690678 0.041371 0.009325 0.931992 0.018588 0.040095 0.009325 0.933792 0.013712 0.043171 0.030864 0.030896 0.040126 0.898114 0.009325 0.930715 0.016788 0.043171 0.012402 0.944299 0.003204 0.040095 0.030864 0.722726 0.037050 0.209361 0.395228 0.062942 0.495581 0.046248 MOTIF 12-CCCCWCCCCCR STREME-12 letter-probability matrix: alength= 4 w= 11 nsites= 2215 E= 4.5e-006 0.000046 0.999847 0.000062 0.000046 0.099353 0.767064 0.133537 0.000046 0.000046 0.999847 0.000062 0.000046 0.032657 0.640648 0.205887 0.120808 0.409623 0.000062 0.196924 0.393391 0.123796 0.517269 0.175486 0.183449 0.024306 0.950887 0.024762 0.000046 0.000046 0.999847 0.000062 0.000046 0.000046 0.999847 0.000062 0.000046 0.153209 0.643611 0.122441 0.080738 0.549797 0.000062 0.450095 0.000046 MOTIF 13-GCGGCGGCGGCGGC STREME-13 letter-probability matrix: alength= 4 w= 14 nsites= 639 E= 5.3e-005 0.026509 0.002182 0.971245 0.000065 0.149645 0.736748 0.087350 0.026257 0.009999 0.016153 0.958512 0.015336 0.070422 0.000087 0.929426 0.000065 0.053470 0.898606 0.000087 0.047837 0.039322 0.023824 0.934693 0.002160 0.041967 0.043581 0.897984 0.016469 0.039482 0.790310 0.099184 0.071024 0.088517 0.118930 0.741443 0.051110 0.045630 0.004712 0.933881 0.015777 0.034208 0.961304 0.004424 0.000065 0.052044 0.016489 0.931402 0.000065 0.045276 0.043180 0.888612 0.022932 0.006892 0.687347 0.248168 0.057592 MOTIF 14-GAGYRAGACTCYGTC STREME-14 letter-probability matrix: alength= 4 w= 15 nsites= 188 E= 7.5e-005 0.047999 0.000220 0.882523 0.069259 0.988767 0.000220 0.010850 0.000164 0.053314 0.005535 0.925043 0.016109 0.000164 0.574246 0.000220 0.425370 0.409424 0.000220 0.579563 0.010794 0.994082 0.000220 0.005535 0.000164 0.122411 0.000220 0.877206 0.000164 0.946247 0.010850 0.042740 0.000164 0.000164 0.877207 0.032110 0.090519 0.053314 0.223451 0.010850 0.712386 0.026739 0.824057 0.074631 0.074574 0.053314 0.382905 0.016165 0.547617 0.265917 0.095891 0.616768 0.021424 0.032054 0.122466 0.021480 0.824001 0.000164 0.903783 0.021480 0.074574 MOTIF 15-CAGGAGTTCRAGA STREME-15 letter-probability matrix: alength= 4 w= 13 nsites= 194 E= 1.7e-003 0.006097 0.975733 0.000244 0.017926 0.993415 0.000244 0.000244 0.006097 0.144589 0.035732 0.819497 0.000182 0.100734 0.006159 0.857437 0.035670 0.792312 0.023903 0.130371 0.053414 0.136222 0.000244 0.816034 0.047500 0.162336 0.050018 0.000244 0.787402 0.000182 0.000244 0.000244 0.999329 0.041584 0.649871 0.100796 0.207748 0.467451 0.089524 0.431014 0.012012 0.963841 0.012073 0.000244 0.023841 0.000182 0.006159 0.975733 0.017926 0.952012 0.000244 0.047562 0.000182 MOTIF 16-CGCCCGCCACCA STREME-16 letter-probability matrix: alength= 4 w= 12 nsites= 291 E= 3.1e-003 0.006184 0.764624 0.000248 0.228944 0.205920 0.000248 0.793647 0.000185 0.000185 0.981384 0.000248 0.018183 0.121033 0.758538 0.108245 0.012184 0.012184 0.754068 0.000248 0.233501 0.231420 0.006247 0.762148 0.000185 0.012184 0.981384 0.000248 0.006184 0.000185 0.981384 0.000248 0.018183 0.968165 0.000248 0.031402 0.000185 0.006184 0.981384 0.006247 0.006184 0.006184 0.987384 0.000248 0.006184 0.945029 0.009491 0.045296 0.000185 MOTIF 17-AAAAAAAAAAANAAA STREME-17 letter-probability matrix: alength= 4 w= 15 nsites= 484 E= 4.2e-003 0.985791 0.000155 0.000155 0.013899 0.935664 0.052788 0.011432 0.000116 0.988297 0.003914 0.007673 0.000116 0.690212 0.138966 0.057913 0.112908 0.975231 0.001408 0.013583 0.009777 0.862433 0.071061 0.000155 0.066351 0.876762 0.070330 0.026479 0.026430 0.737528 0.139130 0.028289 0.095053 0.991135 0.007034 0.000155 0.001676 0.999574 0.000155 0.000155 0.000116 0.999574 0.000155 0.000155 0.000116 0.185674 0.323647 0.289482 0.201197 0.943188 0.007673 0.026469 0.022669 0.999574 0.000155 0.000155 0.000116 0.953512 0.014788 0.023793 0.007907 MOTIF 18-AATAAATAAAT STREME-18 letter-probability matrix: alength= 4 w= 11 nsites= 215 E= 1.0e-002 0.923154 0.000296 0.000296 0.076253 0.923763 0.071704 0.000296 0.004236 0.000221 0.082229 0.000296 0.917254 0.779579 0.004176 0.216024 0.000221 0.827633 0.007474 0.050702 0.114191 0.776491 0.097966 0.110967 0.014576 0.000221 0.106369 0.022851 0.870559 0.708574 0.075051 0.138978 0.077397 0.820938 0.087811 0.000296 0.090955 0.965529 0.008326 0.025923 0.000221 0.000221 0.136650 0.000296 0.862832 MOTIF 19-GGARGCYGAGGCR STREME-19 letter-probability matrix: alength= 4 w= 13 nsites= 769 E= 1.1e-002 0.126748 0.038365 0.834842 0.000045 0.040200 0.003008 0.943482 0.013310 0.936599 0.000061 0.011601 0.051739 0.325028 0.158892 0.501297 0.014783 0.273971 0.013937 0.712047 0.000045 0.094697 0.861845 0.000061 0.043397 0.044043 0.268010 0.189130 0.498817 0.021290 0.000061 0.978603 0.000045 0.785458 0.068096 0.146400 0.000045 0.103257 0.055739 0.838011 0.002993 0.000045 0.007430 0.972959 0.019566 0.059441 0.695852 0.115105 0.129602 0.395851 0.183131 0.235982 0.185036 MOTIF 20-TGGTGAA STREME-20 letter-probability matrix: alength= 4 w= 7 nsites= 419 E= 4.1e-002 0.019427 0.026027 0.026027 0.928518 0.019427 0.026027 0.935118 0.019427 0.019427 0.026027 0.935118 0.019427 0.019427 0.026027 0.026027 0.928518 0.019427 0.026027 0.935118 0.019427 0.928518 0.026027 0.026027 0.019427 0.928518 0.026027 0.026027 0.019427 MOTIF 21-CCTCGTGATCYGCC STREME-21 letter-probability matrix: alength= 4 w= 14 nsites= 133 E= 7.9e-002 0.000248 0.966954 0.000333 0.032465 0.008302 0.942792 0.016441 0.032465 0.016357 0.000333 0.016441 0.966870 0.040519 0.668913 0.000333 0.290236 0.177445 0.000333 0.821974 0.000248 0.000248 0.040603 0.008387 0.950762 0.016357 0.000333 0.983062 0.000248 0.942707 0.032549 0.024495 0.000248 0.000248 0.032549 0.008387 0.958816 0.016357 0.958900 0.024495 0.000248 0.024411 0.612542 0.000333 0.362715 0.137180 0.024495 0.838077 0.000248 0.000248 0.958900 0.008387 0.032465 0.000248 0.950846 0.024495 0.024411 MOTIF 22-GGTGAAACCCCRTCT STREME-22 letter-probability matrix: alength= 4 w= 15 nsites= 67 E= 7.9e-002 0.121800 0.000557 0.877227 0.000416 0.013903 0.014044 0.944663 0.027390 0.081339 0.108455 0.000557 0.809649 0.067851 0.000557 0.917689 0.013903 0.971496 0.000557 0.000557 0.027390 0.998470 0.000557 0.000557 0.000416 0.863598 0.000557 0.121942 0.013903 0.013903 0.890714 0.027531 0.067851 0.067851 0.769330 0.014044 0.148775 0.094826 0.688407 0.000557 0.216210 0.040877 0.647945 0.000557 0.310621 0.445494 0.000557 0.540046 0.013903 0.000416 0.121942 0.027531 0.850111 0.027390 0.823279 0.000557 0.148774 0.013903 0.000557 0.027531 0.958009 MOTIF 23-CTAAAAATAC STREME-23 letter-probability matrix: alength= 4 w= 10 nsites= 165 E= 8.4e-002 0.030261 0.968734 0.000575 0.000429 0.000429 0.000575 0.000575 0.998420 0.998420 0.000575 0.000575 0.000429 0.808896 0.148320 0.028428 0.014356 0.970568 0.000575 0.014501 0.014356 0.944585 0.014501 0.014501 0.026412 0.893399 0.070212 0.035960 0.000429 0.000429 0.069887 0.000575 0.929108 0.838571 0.070212 0.090788 0.000429 0.000429 0.767546 0.130066 0.101958 MOTIF 24-CAAGATGGCGA STREME-24 letter-probability matrix: alength= 4 w= 11 nsites= 267 E= 1.2e-001 0.018276 0.858513 0.081257 0.041954 0.920480 0.005338 0.054846 0.019336 0.913342 0.017854 0.033138 0.035667 0.016294 0.259124 0.677444 0.047138 0.909810 0.019375 0.038502 0.032313 0.035978 0.018901 0.041173 0.903948 0.019959 0.003816 0.945270 0.030955 0.033805 0.025727 0.916844 0.023624 0.066443 0.671406 0.059972 0.202179 0.100119 0.053882 0.807993 0.038005 0.664787 0.059219 0.219382 0.056611 MOTIF 25-CCTGTAATCCC STREME-25 letter-probability matrix: alength= 4 w= 11 nsites= 65 E= 1.6e-001 0.020444 0.918627 0.020652 0.040278 0.000611 0.938458 0.000819 0.060112 0.000611 0.004639 0.000819 0.993930 0.060112 0.034101 0.905176 0.000611 0.000611 0.000819 0.000819 0.997750 0.997750 0.000819 0.000819 0.000611 0.839067 0.000819 0.159502 0.000611 0.000611 0.000819 0.000819 0.997750 0.000611 0.990608 0.008169 0.000611 0.000611 0.950061 0.009050 0.040278 0.060112 0.890558 0.000819 0.048511 MOTIF 26-CATTTC STREME-26 letter-probability matrix: alength= 4 w= 6 nsites= 1472 E= 2.5e-001 0.019427 0.935118 0.026027 0.019427 0.928518 0.026027 0.026027 0.019427 0.019427 0.026027 0.026027 0.928518 0.019427 0.026027 0.026027 0.928518 0.019427 0.026027 0.026027 0.928518 0.019427 0.935118 0.026027 0.019427 MOTIF 27-GTAGCTGGGAC STREME-27 letter-probability matrix: alength= 4 w= 11 nsites= 68 E= 3.2e-001 0.000536 0.000718 0.998209 0.000536 0.000536 0.000718 0.000718 0.998027 0.998027 0.000718 0.000718 0.000536 0.052714 0.018111 0.928639 0.000536 0.000536 0.876458 0.000718 0.122287 0.000536 0.000718 0.000718 0.998027 0.029723 0.000718 0.944412 0.025147 0.087499 0.000718 0.859068 0.052714 0.035321 0.000718 0.911247 0.052714 0.998027 0.000718 0.000718 0.000536 0.000536 0.677882 0.000718 0.320864 MOTIF 28-AGTGCAGTG STREME-28 letter-probability matrix: alength= 4 w= 9 nsites= 71 E= 3.2e-001 0.877118 0.119764 0.001786 0.001333 0.001333 0.001786 0.995549 0.001333 0.001333 0.001786 0.001786 0.995096 0.001333 0.001786 0.995549 0.001333 0.001333 0.764204 0.001786 0.232677 0.995096 0.001786 0.001786 0.001333 0.001333 0.001786 0.995549 0.001333 0.001333 0.001786 0.001786 0.995096 0.001333 0.001786 0.995549 0.001333 MOTIF 29-AGGAAG STREME-29 letter-probability matrix: alength= 4 w= 6 nsites= 2206 E= 3.6e-001 0.928518 0.026027 0.026027 0.019427 0.019427 0.026027 0.935118 0.019427 0.019427 0.026027 0.935118 0.019427 0.928518 0.026027 0.026027 0.019427 0.928518 0.026027 0.026027 0.019427 0.019427 0.026027 0.935118 0.019427 MOTIF 30-AATCCCAGCACT STREME-30 letter-probability matrix: alength= 4 w= 12 nsites= 52 E= 6.4e-001 0.953198 0.000915 0.023060 0.022828 0.997488 0.000915 0.000915 0.000683 0.000683 0.000915 0.000915 0.997488 0.000683 0.931282 0.000915 0.067121 0.022828 0.864844 0.000915 0.111414 0.000683 0.953430 0.000915 0.044973 0.997488 0.000915 0.000915 0.000683 0.022828 0.000915 0.975575 0.000683 0.000683 0.975575 0.000915 0.022828 0.953197 0.000915 0.045206 0.000683 0.000683 0.909138 0.045206 0.044974 0.000683 0.000915 0.000915 0.997488 MOTIF 31-ACAACAACAACARM STREME-31 letter-probability matrix: alength= 4 w= 14 nsites= 66 E= 6.4e-001 0.830303 0.000693 0.168486 0.000517 0.034076 0.780143 0.017472 0.168309 0.998097 0.000693 0.000693 0.000517 0.722664 0.017472 0.192230 0.067634 0.034076 0.813701 0.000693 0.151530 0.930980 0.067810 0.000693 0.000517 0.722664 0.000693 0.209009 0.067634 0.000517 0.964714 0.034251 0.000517 0.930980 0.000693 0.051031 0.017297 0.830305 0.000693 0.034251 0.134751 0.000517 0.947935 0.000693 0.050855 0.998097 0.000693 0.000693 0.000517 0.588431 0.000693 0.360021 0.050855 0.420624 0.561386 0.000693 0.017297 MOTIF 32-CCAGCCTGGCCA STREME-32 letter-probability matrix: alength= 4 w= 12 nsites= 60 E= 8.0e-001 0.024739 0.930667 0.043930 0.000663 0.043705 0.933222 0.000889 0.022184 0.997559 0.000889 0.000889 0.000663 0.022184 0.022409 0.933223 0.022184 0.022184 0.976264 0.000889 0.000663 0.009595 0.970990 0.009820 0.009595 0.000663 0.086979 0.009820 0.902537 0.009595 0.022409 0.967332 0.000663 0.012296 0.014904 0.963205 0.009595 0.007109 0.829039 0.141668 0.022184 0.122876 0.789482 0.086979 0.000663 0.997559 0.000889 0.000889 0.000663 MOTIF 33-CCCGGCCCCGC STREME-33 letter-probability matrix: alength= 4 w= 11 nsites= 573 E= 9.8e-001 0.038382 0.878889 0.000222 0.082508 0.059979 0.742050 0.011506 0.186466 0.084050 0.899695 0.000222 0.016033 0.000166 0.246557 0.753112 0.000166 0.191476 0.000222 0.808137 0.000166 0.000166 0.967781 0.000222 0.031831 0.081913 0.904263 0.000222 0.013602 0.006116 0.952005 0.028331 0.013547 0.085503 0.743031 0.171300 0.000166 0.035351 0.000222 0.788287 0.176140 0.000166 0.946436 0.022884 0.030515 MOTIF 34-CCAAGGTCACA STREME-34 letter-probability matrix: alength= 4 w= 11 nsites= 174 E= 1.1e+000 0.070334 0.823732 0.000362 0.105572 0.012663 0.904247 0.021513 0.061578 0.909737 0.028325 0.052910 0.009028 0.999007 0.000362 0.000362 0.000270 0.017786 0.000362 0.981582 0.000270 0.144037 0.000362 0.802782 0.052819 0.000270 0.052915 0.000362 0.946453 0.000270 0.990340 0.000362 0.009028 0.893908 0.000362 0.017878 0.087853 0.096612 0.804269 0.000362 0.098757 0.675512 0.180088 0.144130 0.000270 MOTIF 35-CCGGGGCTGCSG STREME-35 letter-probability matrix: alength= 4 w= 12 nsites= 252 E= 1.2e+000 0.000189 0.900834 0.061730 0.037248 0.032005 0.891459 0.076347 0.000189 0.038131 0.102900 0.828145 0.030823 0.094931 0.229388 0.663238 0.012442 0.027521 0.022788 0.931122 0.018569 0.000189 0.000253 0.960066 0.039492 0.014985 0.958886 0.000253 0.025876 0.000189 0.000253 0.032713 0.966845 0.061456 0.000253 0.892672 0.045619 0.006316 0.993242 0.000253 0.000189 0.049776 0.430716 0.494812 0.024696 0.115197 0.062572 0.703878 0.118353 MOTIF 36-CGGAAGTGAT STREME-36 letter-probability matrix: alength= 4 w= 10 nsites= 42 E= 1.3e+000 0.019427 0.935118 0.026027 0.019427 0.019427 0.026027 0.935118 0.019427 0.019427 0.026027 0.935118 0.019427 0.928518 0.026027 0.026027 0.019427 0.928518 0.026027 0.026027 0.019427 0.019427 0.026027 0.935118 0.019427 0.019427 0.026027 0.026027 0.928518 0.019427 0.026027 0.935118 0.019427 0.928518 0.026027 0.026027 0.019427 0.019427 0.026027 0.026027 0.928518 MOTIF 37-CATTTTACAGATGA STREME-37 letter-probability matrix: alength= 4 w= 14 nsites= 109 E= 1.4e+000 0.048855 0.717378 0.058668 0.175099 0.921209 0.039246 0.039246 0.000299 0.019722 0.033565 0.010112 0.936601 0.010011 0.107223 0.039246 0.843521 0.000299 0.029534 0.010112 0.960054 0.058566 0.140388 0.000401 0.800645 0.901787 0.000401 0.087801 0.010011 0.000299 0.746511 0.029534 0.223655 0.901787 0.019823 0.078090 0.000299 0.169420 0.019823 0.693924 0.116833 0.911498 0.019823 0.068379 0.000299 0.068277 0.029534 0.048957 0.853231 0.204233 0.029534 0.693925 0.072308 0.785254 0.000401 0.087801 0.126544 MOTIF 38-CCGGGACCCM STREME-38 letter-probability matrix: alength= 4 w= 10 nsites= 1179 E= 1.7e+000 0.107678 0.773075 0.000128 0.119119 0.005262 0.756324 0.149651 0.088763 0.004714 0.088354 0.906836 0.000095 0.195803 0.098255 0.612314 0.093629 0.026170 0.002604 0.970293 0.000932 0.932598 0.000128 0.000128 0.067147 0.029651 0.970126 0.000128 0.000095 0.029637 0.746842 0.191013 0.032508 0.000166 0.891887 0.062955 0.044993 0.393079 0.322576 0.124489 0.159855 MOTIF 39-CCTCAAGTGATC STREME-39 letter-probability matrix: alength= 4 w= 12 nsites= 46 E= 1.0e+001 0.025155 0.826656 0.147437 0.000752 0.000752 0.997487 0.001008 0.000752 0.000752 0.011136 0.001008 0.987104 0.000752 0.997487 0.001008 0.000752 0.899619 0.025410 0.001008 0.073963 0.728761 0.001008 0.245076 0.025155 0.049558 0.001008 0.948682 0.000752 0.000752 0.001008 0.049814 0.948426 0.000752 0.025410 0.948683 0.025155 0.997232 0.001008 0.001008 0.000752 0.000752 0.011136 0.001008 0.987104 0.000752 0.997487 0.001008 0.000752 MOTIF 40-CAGTGACKT STREME-40 letter-probability matrix: alength= 4 w= 9 nsites= 491 E= 3.3e+001 0.199112 0.622679 0.021871 0.156338 0.668995 0.020115 0.205430 0.105460 0.257196 0.000201 0.697323 0.045280 0.000150 0.262416 0.000201 0.737234 0.049849 0.023271 0.738833 0.188046 0.999449 0.000201 0.000201 0.000150 0.000150 0.999500 0.000201 0.000150 0.148588 0.000201 0.310889 0.540322 0.172892 0.000201 0.000201 0.826707 MOTIF 41-AGCAGCAGCAGCAGS STREME-41 letter-probability matrix: alength= 4 w= 15 nsites= 87 E= 3.5e+001 0.796531 0.196207 0.000524 0.006738 0.025780 0.076690 0.897139 0.000391 0.000391 0.968036 0.031181 0.000391 0.960477 0.025913 0.013219 0.000391 0.038474 0.013219 0.947916 0.000391 0.063863 0.909833 0.025913 0.000391 0.719286 0.051301 0.025913 0.203500 0.101946 0.038607 0.859056 0.000391 0.000391 0.917259 0.063996 0.018354 0.828267 0.063995 0.069264 0.038474 0.000391 0.114772 0.884445 0.000391 0.000391 0.960610 0.038607 0.000391 0.757368 0.063996 0.152856 0.025780 0.025780 0.127467 0.846362 0.000391 0.025780 0.592475 0.381354 0.000391 ******************************************************************************** Stopped because 3 consecutive motifs exceeded the p-value threshold (0.05). ******************************************************************************** COMMAND: streme --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d6_BCG_TRIM1_7_peaks/streme_out -dna --p /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d6_BCG_TRIM1_7_peaks/seqs-centered --minw 6 --maxw 15 --order 2 ******************************************************************************** CPU: cn45 ******************************************************************************** FINALTIME: 1787.51 seconds ********************************************************************************