Query_ID Target_ID Optimal_offset p-value E-value q-value Overlap Query_consensus Target_consensus Orientation 1 1 0 6.81031e-43 2.04309e-41 4.08619e-41 15 TAAAAATACAAAAAA TAAAAATACAAAAAA + 1 27 -1 1.51977e-07 4.5593e-06 4.5593e-06 14 TAAAAATACAAAAAA AAAAAAAAAAACAAA + 1 20 -1 4.30316e-06 0.000129095 8.60632e-05 9 TAAAAATACAAAAAA AAAAATACA + 1 28 -4 0.00160455 0.0481364 0.0240682 11 TAAAAATACAAAAAA AATAAATAAAT + 1 16 1 0.00361073 0.108322 0.0433288 14 TAAAAATACAAAAAA CTATCTCTACAAAAA + 2 2 0 2.9346e-35 8.80381e-34 1.76076e-33 15 AAGTAGCTGGGATTA AAGTAGCTGGGATTA + 2 10 -4 2.40689e-08 7.22068e-07 7.22068e-07 11 AAGTAGCTGGGATTA AGCTGGGATTACAGG - 3 3 0 2.17958e-41 6.53874e-40 1.30775e-39 15 GGAGGCTGAGGCGGG GGAGGCTGAGGCGGG + 3 29 0 9.15236e-09 2.74571e-07 2.74571e-07 13 GGAGGCTGAGGCGGG GGAGGCTGAGGCA + 3 23 -1 3.66394e-05 0.00109918 0.000732788 14 GGAGGCTGAGGCGGG GCGGCGGCGGCGGC + 3 21 2 6.83609e-05 0.00205083 0.00102541 13 GGAGGCTGAGGCGGG CGGGAGGCGGAGGTT - 3 9 3 0.000294607 0.00883821 0.00353528 10 GGAGGCTGAGGCGGG TCGGGAGGCTGAG - 4 4 0 7.82692e-37 2.34807e-35 4.69615e-35 15 GGTTTCACCATGTTG GGTTTCACCATGTTG + 5 5 0 4.65748e-34 1.39724e-32 2.79449e-32 15 GCCACCACGCCCGGC GCCACCACGCCCGGC + 6 6 0 7.42399e-34 2.2272e-32 4.45439e-32 15 TGGTCTCGAACTCCT TGGTCTCGAACTCCT + 6 25 -3 1.72702e-07 5.18107e-06 5.18107e-06 12 TGGTCTCGAACTCCT TCTTGAACTCCTG - 6 9 -4 0.00198958 0.0596873 0.0397916 11 TGGTCTCGAACTCCT CTCAGCCTCCCGA + 7 7 0 5.50952e-39 1.65286e-37 3.30571e-37 15 AGGATCACTTGAGCC AGGATCACTTGAGCC + 7 12 2 1.8304e-13 5.49119e-12 5.49119e-12 13 AGGATCACTTGAGCC GGAGGATCACTTGAG + 8 8 0 7.66214e-35 2.29864e-33 4.59728e-33 15 GCTGGAGTGCAGTGG GCTGGAGTGCAGTGG + 8 18 -5 9.01151e-05 0.00270345 0.00270345 10 GCTGGAGTGCAGTGG AGTGCAGTGGCGCG + 9 9 0 3.10448e-31 9.31345e-30 1.86269e-29 13 CTCAGCCTCCCGA CTCAGCCTCCCGA + 9 21 3 1.42628e-06 4.27883e-05 4.27883e-05 12 CTCAGCCTCCCGA AACCTCCGCCTCCCG + 9 3 5 7.9048e-05 0.00237144 0.00158096 10 CTCAGCCTCCCGA CCCGCCTCAGCCTCC - 9 29 3 0.000124144 0.00372433 0.00186217 10 CTCAGCCTCCCGA TGCCTCAGCCTCC - 9 6 4 0.000504551 0.0151365 0.00605461 11 CTCAGCCTCCCGA TGGTCTCGAACTCCT + 9 25 1 0.00265352 0.0796055 0.0265352 12 CTCAGCCTCCCGA TCTTGAACTCCTG - 10 10 0 1.97798e-39 5.93394e-38 1.18679e-37 15 CCTGTAATCCCAGCT CCTGTAATCCCAGCT + 10 2 -4 1.10768e-05 0.000332303 0.000332303 11 CCTGTAATCCCAGCT TAATCCCAGCTACTT - 11 11 0 1.53591e-36 4.60773e-35 9.21547e-35 15 CGATCTCGGCTCACT CGATCTCGGCTCACT + 11 17 -2 4.5686e-10 1.37058e-08 1.37058e-08 13 CGATCTCGGCTCACT ATCTCGGCTCACTGC - 12 12 0 1.12045e-40 3.36135e-39 6.7227e-39 15 GGAGGATCACTTGAG GGAGGATCACTTGAG + 12 7 -2 4.89775e-10 1.46932e-08 1.46932e-08 13 GGAGGATCACTTGAG AGGATCACTTGAGCC + 13 13 0 6.27723e-36 1.88317e-34 3.76634e-34 15 CCAGCCTGGGCAACA CCAGCCTGGGCAACA + 14 14 0 1.70892e-28 5.12677e-27 1.02535e-26 12 ACCCCGTCTCTA ACCCCGTCTCTA + 14 16 -3 0.00206199 0.0618598 0.0618598 9 ACCCCGTCTCTA CTATCTCTACAAAAA + 15 15 0 1.99744e-30 5.99233e-29 1.19847e-28 12 CGTGAGCCACCA CGTGAGCCACCA + 15 26 0 0.00108186 0.0324557 0.0324557 12 CGTGAGCCACCA CGCCCGCCACCA + 16 16 0 1.08979e-41 3.26937e-40 6.53874e-40 15 CTATCTCTACAAAAA CTATCTCTACAAAAA + 16 14 3 0.000309755 0.00929264 0.00929264 9 CTATCTCTACAAAAA ACCCCGTCTCTA + 17 17 0 6.68995e-34 2.00699e-32 4.01397e-32 15 GCAGTGAGCCGAGAT GCAGTGAGCCGAGAT + 17 11 -2 1.60169e-08 4.80506e-07 4.80506e-07 13 GCAGTGAGCCGAGAT AGTGAGCCGAGATCG - 18 18 0 1.48316e-31 4.44948e-30 8.89895e-30 14 AGTGCAGTGGCGCG AGTGCAGTGGCGCG + 18 8 5 3.04892e-06 9.14675e-05 9.14675e-05 10 AGTGCAGTGGCGCG GCTGGAGTGCAGTGG + 19 19 0 3.57055e-35 1.07117e-33 2.14233e-33 15 AAAATTAGCCGGGCG AAAATTAGCCGGGCG + 20 20 0 2.00768e-17 6.02303e-16 1.20461e-15 9 AAAAATACA AAAAATACA + 20 1 1 0.000101406 0.00304219 0.00304219 9 AAAAATACA TAAAAATACAAAAAA + 20 27 4 0.000991961 0.0297588 0.0198392 9 AAAAATACA AAAAAAAAAAACAAA + 20 28 1 0.00333481 0.100044 0.0500221 9 AAAAATACA AATAAATAAAT + 21 21 0 8.79102e-39 2.63731e-37 5.27461e-37 15 AACCTCCGCCTCCCG AACCTCCGCCTCCCG + 21 9 -3 2.11724e-05 0.000635172 0.000635172 12 AACCTCCGCCTCCCG CTCAGCCTCCCGA + 21 3 2 6.57807e-05 0.00197342 0.00131561 13 AACCTCCGCCTCCCG CCCGCCTCAGCCTCC - 21 29 0 9.89959e-05 0.00296988 0.00148494 13 AACCTCCGCCTCCCG TGCCTCAGCCTCC - 21 23 -1 0.0023363 0.0700891 0.0280357 14 AACCTCCGCCTCCCG GCCGCCGCCGCCGC - 22 22 0 4.14794e-29 1.24438e-27 2.48876e-27 11 CCCCACCCCCA CCCCACCCCCA + 22 5 2 0.000886626 0.0265988 0.0265988 11 CCCCACCCCCA GCCACCACGCCCGGC + 23 23 0 6.44985e-36 1.93495e-34 3.86991e-34 14 GCGGCGGCGGCGGC GCGGCGGCGGCGGC + 23 3 1 5.5432e-05 0.00166296 0.00166296 14 GCGGCGGCGGCGGC GGAGGCTGAGGCGGG + 23 21 0 0.00171656 0.0514969 0.0343313 14 GCGGCGGCGGCGGC CGGGAGGCGGAGGTT - 23 29 -2 0.00388023 0.116407 0.0465627 12 GCGGCGGCGGCGGC GGAGGCTGAGGCA + 24 24 0 4.26836e-41 1.28051e-39 2.56101e-39 15 GAGCGAGACTCTGTC GAGCGAGACTCTGTC + 25 25 0 1.6568e-34 4.97041e-33 9.94083e-33 13 CAGGAGTTCAAGA CAGGAGTTCAAGA + 25 6 -1 4.71327e-08 1.41398e-06 1.41398e-06 12 CAGGAGTTCAAGA AGGAGTTCGAGACCA - 25 9 1 0.00234366 0.0703098 0.0468732 12 CAGGAGTTCAAGA TCGGGAGGCTGAG - 26 26 0 2.17373e-29 6.5212e-28 1.30424e-27 12 CGCCCGCCACCA CGCCCGCCACCA + 26 15 0 0.000919332 0.02758 0.02758 12 CGCCCGCCACCA CGTGAGCCACCA + 27 27 0 6.50664e-35 1.95199e-33 3.90398e-33 15 AAAAAAAAAAACAAA AAAAAAAAAAACAAA + 27 1 1 2.54007e-06 7.6202e-05 7.6202e-05 14 AAAAAAAAAAACAAA TAAAAATACAAAAAA + 27 20 -6 0.000696984 0.0209095 0.0139397 9 AAAAAAAAAAACAAA AAAAATACA + 27 28 -1 0.00118756 0.0356268 0.0178134 11 AAAAAAAAAAACAAA AATAAATAAAT + 28 28 0 9.9509e-30 2.98527e-28 5.97054e-28 11 AATAAATAAAT AATAAATAAAT + 28 27 1 0.000578088 0.0173426 0.0156078 11 AATAAATAAAT AAAAAAAAAAACAAA + 28 1 4 0.000780388 0.0234117 0.0156078 11 AATAAATAAAT TAAAAATACAAAAAA + 28 20 -1 0.00178564 0.0535693 0.0267846 9 AATAAATAAAT AAAAATACA + 29 29 0 1.02272e-36 3.06816e-35 6.13631e-35 13 GGAGGCTGAGGCA GGAGGCTGAGGCA + 29 3 0 3.39259e-09 1.01778e-07 1.01778e-07 13 GGAGGCTGAGGCA GGAGGCTGAGGCGGG + 29 21 2 7.57749e-05 0.00227325 0.0015155 13 GGAGGCTGAGGCA CGGGAGGCGGAGGTT - 29 9 3 0.000410462 0.0123139 0.00615693 10 GGAGGCTGAGGCA TCGGGAGGCTGAG - 29 23 2 0.00105718 0.0317153 0.0126861 12 GGAGGCTGAGGCA GCGGCGGCGGCGGC + 30 30 0 1.04672e-14 3.14017e-13 6.28034e-13 7 TGGTGAA TGGTGAA + # Tomtom (Motif Comparison Tool): Version 5.4.1 compiled on Aug 1 2022 at 17:19:44 # The format of this file is described at https://meme-suite.org/meme/doc/tomtom-output-format.html. # tomtom -verbosity 1 -text -thresh 0.1 /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d6_BCG_TRIM1_7_peaks/combined.meme /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d6_BCG_TRIM1_7_peaks/combined.meme