<?xml version='1.0' encoding='UTF-8' standalone='yes'?>
<!-- Document definition -->
<!DOCTYPE MEME[
<!ELEMENT MEME (
  training_set,
  model, 
  motifs, 
  scanned_sites_summary?
)>
<!ATTLIST MEME 
  version CDATA #REQUIRED
  release CDATA #REQUIRED
>
<!-- Training-set elements -->
<!ELEMENT training_set (alphabet, ambigs, sequence*, letter_frequencies)>
<!ATTLIST training_set primary_sequences CDATA #REQUIRED primary_count CDATA #REQUIRED primary_positions CDATA #REQUIRED
  control_sequences CDATA "" control_count CDATA "" control_positions CDATA "">
<!ELEMENT alphabet (letter*)>
<!ATTLIST alphabet name CDATA #REQUIRED>
<!ELEMENT ambigs (letter*)>
<!ELEMENT letter EMPTY>
<!ATTLIST letter id ID #REQUIRED>
<!ATTLIST letter symbol CDATA #REQUIRED>
<!ATTLIST letter equals CDATA #IMPLIED>
<!ATTLIST letter aliases CDATA #IMPLIED>
<!ATTLIST letter complement CDATA #IMPLIED>
<!ATTLIST letter name CDATA #IMPLIED>
<!ATTLIST letter colour CDATA #IMPLIED>
<!ELEMENT sequence EMPTY>
<!ATTLIST sequence id ID #REQUIRED
                   name CDATA #REQUIRED
                   length CDATA #REQUIRED
                   weight CDATA #REQUIRED
>
<!ELEMENT letter_frequencies (alphabet_array)>

<!-- Model elements -->
<!ELEMENT model (
  command_line,
  host,
  type,
  nmotifs,
  evalue_threshold,
  object_function,
  spfun,
  min_width,
  max_width,
  wg,
  ws,
  endgaps,
  minsites,
  maxsites,
  wnsites,
  spmap,
  spfuzz,
  prior,
  beta,
  maxiter,
  distance,
  num_positions,
  seed,
  hsfrac,
  searchsize,
  maxsize,
  norand,
  csites,
  strands,
  brief,
  psp_file,
  priors_file,
  reason_for_stopping,
  background_frequencies
)>
<!ELEMENT command_line (#PCDATA)*>
<!ELEMENT host (#PCDATA)*>
<!ELEMENT type (#PCDATA)*>
<!ELEMENT nmotifs (#PCDATA)*>
<!ELEMENT evalue_threshold (#PCDATA)*>
<!ELEMENT object_function (#PCDATA)*>
<!ELEMENT spfun (#PCDATA)*>
<!ELEMENT min_width (#PCDATA)*>
<!ELEMENT max_width (#PCDATA)*>
<!ELEMENT wg (#PCDATA)*>
<!ELEMENT ws (#PCDATA)*>
<!ELEMENT endgaps (#PCDATA)*>
<!ELEMENT minsites (#PCDATA)*>
<!ELEMENT maxsites (#PCDATA)*>
<!ELEMENT wnsites (#PCDATA)*>
<!ELEMENT spmap (#PCDATA)*>
<!ELEMENT spfuzz (#PCDATA)*>
<!ELEMENT prior (#PCDATA)*>
<!ELEMENT beta (#PCDATA)*>
<!ELEMENT maxiter (#PCDATA)*>
<!ELEMENT distance (#PCDATA)*>
<!ELEMENT num_positions (#PCDATA)*>
<!ELEMENT seed (#PCDATA)*>
<!ELEMENT hsfrac (#PCDATA)*>
<!ELEMENT searchsize (#PCDATA)*>
<!ELEMENT maxsize (#PCDATA)*>
<!ELEMENT norand (#PCDATA)*>
<!ELEMENT csites (#PCDATA)*>
<!ELEMENT strands (#PCDATA)*>
<!ELEMENT brief (#PCDATA)*>
<!ELEMENT psp_file (#PCDATA)*>
<!ELEMENT priors_file (#PCDATA)*>
<!ELEMENT reason_for_stopping (#PCDATA)*>
<!ELEMENT background_frequencies (alphabet_array)>
<!ATTLIST background_frequencies source CDATA #REQUIRED
		   order CDATA #REQUIRED>

<!-- Motif elements -->
<!ELEMENT motifs (motif*)>
<!ELEMENT motif (scores, probabilities, regular_expression?, contributing_sites)>
<!ATTLIST motif id ID #REQUIRED
                name CDATA #REQUIRED
                alt CDATA ""
                width CDATA #REQUIRED
                sites CDATA #REQUIRED
                ic CDATA #REQUIRED
                re CDATA #REQUIRED
                llr CDATA #REQUIRED
                p_value CDATA #REQUIRED
                e_value CDATA #REQUIRED
                bayes_threshold CDATA #REQUIRED
                elapsed_time CDATA #REQUIRED
                url CDATA ""
>
<!ELEMENT scores (alphabet_matrix)>
<!ELEMENT probabilities (alphabet_matrix)>
<!ELEMENT regular_expression (#PCDATA)*>

<!-- Contributing site elements -->
<!-- Contributing sites are motif occurences found during the motif discovery phase -->
<!ELEMENT contributing_sites (contributing_site*)>
<!ELEMENT contributing_site (left_flank, site, right_flank)>
<!ATTLIST contributing_site sequence_id IDREF #REQUIRED
                          position CDATA #REQUIRED
                          strand (plus|minus|none) 'none'
                          pvalue CDATA #REQUIRED
>
<!-- The left_flank contains the sequence for 10 bases to the left of the motif start -->
<!ELEMENT left_flank (#PCDATA)>
<!-- The site contains the sequence for the motif instance -->
<!ELEMENT site (letter_ref*)>
<!-- The right_flank contains the sequence for 10 bases to the right of the motif end -->
<!ELEMENT right_flank (#PCDATA)>

<!-- Scanned site elements -->
<!-- Scanned sites are motif occurences found during the sequence scan phase -->
<!ELEMENT scanned_sites_summary (scanned_sites*)>
<!ATTLIST scanned_sites_summary p_thresh CDATA #REQUIRED>
<!ELEMENT scanned_sites (scanned_site*)>
<!ATTLIST scanned_sites sequence_id IDREF #REQUIRED
                        pvalue CDATA #REQUIRED
                        num_sites CDATA #REQUIRED>
<!ELEMENT scanned_site EMPTY>
<!ATTLIST scanned_site  motif_id IDREF #REQUIRED
                        strand (plus|minus|none) 'none'
                        position CDATA #REQUIRED
                        pvalue CDATA #REQUIRED>

<!-- Utility elements -->
<!-- A reference to a letter in the alphabet -->
<!ELEMENT letter_ref EMPTY>
<!ATTLIST letter_ref letter_id IDREF #REQUIRED>
<!-- A alphabet-array contains one floating point value for each letter in an alphabet -->
<!ELEMENT alphabet_array (value*)>
<!ELEMENT value (#PCDATA)>
<!ATTLIST value letter_id IDREF #REQUIRED>

<!-- A alphabet_matrix contains one alphabet_array for each position in a motif -->
<!ELEMENT alphabet_matrix (alphabet_array*)>

]>
<!-- Begin document body -->
<MEME version="5.4.1" release="Sat Aug 21 19:23:23 2021 -0700">
<training_set primary_sequences="/scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_beta_glu_TRIM1_2_peaks/seqs-centered" primary_count="16853" primary_positions="1685300" control_sequences="--none--" control_count="0" control_positions="0">
<alphabet name="DNA" like="dna">
<letter id="A" symbol="A" complement="T" name="Adenine" colour="CC0000"/>
<letter id="C" symbol="C" complement="G" name="Cytosine" colour="0000CC"/>
<letter id="G" symbol="G" complement="C" name="Guanine" colour="FFB300"/>
<letter id="T" symbol="T" aliases="U" complement="A" name="Thymine" colour="008000"/>
<letter id="N" symbol="N" aliases="X." equals="ACGT" name="Any base"/>
<letter id="V" symbol="V" equals="ACG" name="Not T"/>
<letter id="H" symbol="H" equals="ACT" name="Not G"/>
<letter id="D" symbol="D" equals="AGT" name="Not C"/>
<letter id="B" symbol="B" equals="CGT" name="Not A"/>
<letter id="M" symbol="M" equals="AC" name="Amino"/>
<letter id="R" symbol="R" equals="AG" name="Purine"/>
<letter id="W" symbol="W" equals="AT" name="Weak"/>
<letter id="S" symbol="S" equals="CG" name="Strong"/>
<letter id="Y" symbol="Y" equals="CT" name="Pyrimidine"/>
<letter id="K" symbol="K" equals="GT" name="Keto"/>
</alphabet>
<letter_frequencies>
<alphabet_array>
<value letter_id="A">0.201</value>
<value letter_id="C">0.299</value>
<value letter_id="G">0.299</value>
<value letter_id="T">0.201</value>
</alphabet_array>
</letter_frequencies>
</training_set>
<model>
<command_line>meme /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_beta_glu_TRIM1_2_peaks/seqs-centered -oc /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_beta_glu_TRIM1_2_peaks/meme_out -mod zoops -nmotifs 10 -minw 6 -maxw 15 -bfile /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_beta_glu_TRIM1_2_peaks/background -dna -revcomp -nostatus </command_line>
<host>fv-az119-924</host>
<type>zoops</type>
<nmotifs>10</nmotifs>
<evalue_threshold>inf</evalue_threshold>
<object_function>E-value of product of p-values</object_function>
<spfun>E-value of product of p-values</spfun>
<min_width>6</min_width>
<max_width>15</max_width>
<wg>11</wg>
<ws>1</ws>
<endgaps>yes</endgaps>
<substring>yes</substring>
<minsites>2</minsites>
<maxsites>16853</maxsites>
<wnsites>0.8</wnsites>
<spmap>uni</spmap>
<spfuzz>0.5</spfuzz>
<prior>dirichlet</prior>
<beta>0.01</beta>
<maxiter>50</maxiter>
<distance>1e-05</distance>
<num_positions>1685300</num_positions>
<seed>0</seed>
<hsfrac>0</hsfrac>
<searchsize>100000</searchsize>
<maxsize>0</maxsize>
<norand>no</norand>
<csites>1000</csites>
<strands>both</strands>
<brief>1000</brief>
<psp_file></psp_file>
<priors_file></priors_file>
<reason_for_stopping>Stopped because requested number of motifs (10) found.</reason_for_stopping>
<background_frequencies source="/scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_beta_glu_TRIM1_2_peaks/background" order="2">
<alphabet_array>
<value letter_id="A">0.198</value>
<value letter_id="C">0.302</value>
<value letter_id="G">0.302</value>
<value letter_id="T">0.198</value>
</alphabet_array>
</background_frequencies>
</model>
<motifs>
<motif id="motif_1" name="AAAAAWAMAAAAAWW" alt="MEME-1" width="15" sites="2750" ic="12.9" re="16.7" llr="31862" p_value="1.4e-927" e_value="9.4e-302" bayes_threshold="11.2347" elapsed_time="316.912353">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">184</value>
<value letter_id="C">-238</value>
<value letter_id="G">-279</value>
<value letter_id="T">-7</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">204</value>
<value letter_id="C">-770</value>
<value letter_id="G">-248</value>
<value letter_id="T">-62</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">202</value>
<value letter_id="C">-331</value>
<value letter_id="G">-142</value>
<value letter_id="T">-182</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">190</value>
<value letter_id="C">-174</value>
<value letter_id="G">-205</value>
<value letter_id="T">-101</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">227</value>
<value letter_id="C">-670</value>
<value letter_id="G">-389</value>
<value letter_id="T">-302</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">105</value>
<value letter_id="C">-194</value>
<value letter_id="G">-297</value>
<value letter_id="T">125</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">181</value>
<value letter_id="C">-245</value>
<value letter_id="G">-75</value>
<value letter_id="T">-144</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">119</value>
<value letter_id="C">50</value>
<value letter_id="G">-969</value>
<value letter_id="T">-69</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">213</value>
<value letter_id="C">-421</value>
<value letter_id="G">-870</value>
<value letter_id="T">-79</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">193</value>
<value letter_id="C">-811</value>
<value letter_id="G">-160</value>
<value letter_id="T">-48</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">186</value>
<value letter_id="C">-162</value>
<value letter_id="G">-153</value>
<value letter_id="T">-132</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">175</value>
<value letter_id="C">-145</value>
<value letter_id="G">-150</value>
<value letter_id="T">-76</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">198</value>
<value letter_id="C">-811</value>
<value letter_id="G">-123</value>
<value letter_id="T">-113</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">132</value>
<value letter_id="C">-169</value>
<value letter_id="G">-284</value>
<value letter_id="T">91</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">139</value>
<value letter_id="C">-538</value>
<value letter_id="G">-411</value>
<value letter_id="T">120</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.709455</value>
<value letter_id="C">0.057818</value>
<value letter_id="G">0.043636</value>
<value letter_id="T">0.189091</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.815273</value>
<value letter_id="C">0.001455</value>
<value letter_id="G">0.054182</value>
<value letter_id="T">0.129091</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.800364</value>
<value letter_id="C">0.030545</value>
<value letter_id="G">0.113091</value>
<value letter_id="T">0.056000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.738545</value>
<value letter_id="C">0.090182</value>
<value letter_id="G">0.073091</value>
<value letter_id="T">0.098182</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.952364</value>
<value letter_id="C">0.002909</value>
<value letter_id="G">0.020364</value>
<value letter_id="T">0.024364</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.410545</value>
<value letter_id="C">0.078909</value>
<value letter_id="G">0.038545</value>
<value letter_id="T">0.472000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.692364</value>
<value letter_id="C">0.055273</value>
<value letter_id="G">0.179636</value>
<value letter_id="T">0.072727</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.450909</value>
<value letter_id="C">0.425818</value>
<value letter_id="G">0.000364</value>
<value letter_id="T">0.122909</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.868000</value>
<value letter_id="C">0.016364</value>
<value letter_id="G">0.000727</value>
<value letter_id="T">0.114909</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.757091</value>
<value letter_id="C">0.001091</value>
<value letter_id="G">0.099636</value>
<value letter_id="T">0.142182</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.717455</value>
<value letter_id="C">0.098545</value>
<value letter_id="G">0.104727</value>
<value letter_id="T">0.079273</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.666545</value>
<value letter_id="C">0.110182</value>
<value letter_id="G">0.106545</value>
<value letter_id="T">0.116727</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.779636</value>
<value letter_id="C">0.001091</value>
<value letter_id="G">0.128727</value>
<value letter_id="T">0.090545</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.493091</value>
<value letter_id="C">0.093818</value>
<value letter_id="G">0.042182</value>
<value letter_id="T">0.370909</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.519273</value>
<value letter_id="C">0.007273</value>
<value letter_id="G">0.017455</value>
<value letter_id="T">0.456000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
AAAAA[TA]A[AC]AAAAA[AT][AT]
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_2" name="RARKWGCTGGGATTA" alt="MEME-2" width="15" sites="987" ic="20.8" re="21.9" llr="14957" p_value="9.9e-359" e_value="1.8e-120" bayes_threshold="12.7512" elapsed_time="568.465862">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">164</value>
<value letter_id="C">-331</value>
<value letter_id="G">9</value>
<value letter_id="T">-266</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">228</value>
<value letter_id="C">-590</value>
<value letter_id="G">-441</value>
<value letter_id="T">-344</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">134</value>
<value letter_id="C">-590</value>
<value letter_id="G">71</value>
<value letter_id="T">-1659</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-248</value>
<value letter_id="C">-441</value>
<value letter_id="G">65</value>
<value letter_id="T">127</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">136</value>
<value letter_id="C">-452</value>
<value letter_id="G">-522</value>
<value letter_id="T">125</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-257</value>
<value letter_id="C">-397</value>
<value letter_id="G">163</value>
<value letter_id="T">-403</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-370</value>
<value letter_id="C">162</value>
<value letter_id="G">-463</value>
<value letter_id="T">-212</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-336</value>
<value letter_id="C">-397</value>
<value letter_id="G">-822</value>
<value letter_id="T">228</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-115</value>
<value letter_id="C">-822</value>
<value letter_id="G">159</value>
<value letter_id="T">-661</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-266</value>
<value letter_id="C">-722</value>
<value letter_id="G">167</value>
<value letter_id="T">-561</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-134</value>
<value letter_id="C">-822</value>
<value letter_id="G">159</value>
<value letter_id="T">-429</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">229</value>
<value letter_id="C">-1659</value>
<value letter_id="G">-363</value>
<value letter_id="T">-561</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-480</value>
<value letter_id="C">-21</value>
<value letter_id="G">-663</value>
<value letter_id="T">188</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-403</value>
<value letter_id="C">-258</value>
<value letter_id="G">-663</value>
<value letter_id="T">224</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">227</value>
<value letter_id="C">-622</value>
<value letter_id="G">-301</value>
<value letter_id="T">-661</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.617021</value>
<value letter_id="C">0.030395</value>
<value letter_id="G">0.321175</value>
<value letter_id="T">0.031408</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.962513</value>
<value letter_id="C">0.005066</value>
<value letter_id="G">0.014184</value>
<value letter_id="T">0.018237</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.502533</value>
<value letter_id="C">0.005066</value>
<value letter_id="G">0.492401</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.035461</value>
<value letter_id="C">0.014184</value>
<value letter_id="G">0.473151</value>
<value letter_id="T">0.477204</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.508612</value>
<value letter_id="C">0.013171</value>
<value letter_id="G">0.008105</value>
<value letter_id="T">0.470111</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.033435</value>
<value letter_id="C">0.019250</value>
<value letter_id="G">0.935157</value>
<value letter_id="T">0.012158</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.015198</value>
<value letter_id="C">0.927052</value>
<value letter_id="G">0.012158</value>
<value letter_id="T">0.045593</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.019250</value>
<value letter_id="C">0.019250</value>
<value letter_id="G">0.001013</value>
<value letter_id="T">0.960486</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.089159</value>
<value letter_id="C">0.001013</value>
<value letter_id="G">0.907801</value>
<value letter_id="T">0.002026</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.031408</value>
<value letter_id="C">0.002026</value>
<value letter_id="G">0.962513</value>
<value letter_id="T">0.004053</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.078014</value>
<value letter_id="C">0.001013</value>
<value letter_id="G">0.910841</value>
<value letter_id="T">0.010132</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.971631</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.024316</value>
<value letter_id="T">0.004053</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.007092</value>
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</probabilities>
<regular_expression>
[AG]A[AG][TG][AT]GCTGGGA[TC]TA
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_3" name="TGTTGSCCAGGCTGG" alt="MEME-3" width="15" sites="715" ic="23.6" re="22.9" llr="11344" p_value="6.4e-316" e_value="3.6e-112" bayes_threshold="12.8654" elapsed_time="818.000837">
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<value letter_id="T">-262</value>
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<regular_expression>
TGT[TC][GA][CG]CCAGGCTGG
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_4" name="GAGACRGGGTTTCRC" alt="MEME-4" width="15" sites="661" ic="22.0" re="22.1" llr="10119" p_value="4.0e-296" e_value="2.3e-092" bayes_threshold="12.948" elapsed_time="1064.593345">
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<value letter_id="T">-386</value>
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<alphabet_array>
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<value letter_id="G">-564</value>
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<alphabet_array>
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<regular_expression>
GAGA[CT][GA]G[GA]GT[TC]T[CT][AG]C
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_5" name="GGGAGGCBGMGGCRG" alt="MEME-5" width="15" sites="2610" ic="16.5" re="14.3" llr="25817" p_value="3.7e-608" e_value="8.8e-079" bayes_threshold="11.3035" elapsed_time="1310.471977">
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<alphabet_array>
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<value letter_id="G">93</value>
<value letter_id="T">-306</value>
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<alphabet_array>
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<alphabet_array>
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<alphabet_array>
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<alphabet_array>
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<regular_expression>
[GC]GG[AC]GGC[GTC]G[AC]GGC[GA]G
</regular_expression>
<contributing_sites>
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[GA]CCACC[AG][CT][GA]CC[CT][GA]GC
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AACTCCTG[AG][CG]CTCA[AG]
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CAGTGAGC[CT][GA]AGAT[CT]
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GGTTCAAG[CT][GA]ATTCT
</regular_expression>
<contributing_sites>
</contributing_sites>
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TT[CTA][TA][AC][AT][TGA][TG][ATC]T[CTA][TA][TA][CA][TA]
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
</motifs>
</MEME>
