Query_ID Target_ID Optimal_offset p-value E-value q-value Overlap Query_consensus Target_consensus Orientation 1 1 0 2.94273e-42 6.76827e-41 1.35365e-40 15 TATTTTTGTATTTTT TATTTTTGTATTTTT + 1 22 -7 0.000446703 0.0102742 0.0102742 8 TATTTTTGTATTTTT GTATTTTTA + 2 2 0 6.54201e-38 1.50466e-36 3.00933e-36 15 CCTGTAATCCCAGCT CCTGTAATCCCAGCT + 2 12 -1 2.18029e-08 5.01466e-07 5.01466e-07 14 CCTGTAATCCCAGCT CTGTAATCCCAGCTA + 2 13 -2 5.04244e-05 0.00115976 0.000773174 13 CCTGTAATCCCAGCT TGTTGCCCAGGCTG - 3 3 0 7.0065e-32 1.61149e-30 3.22299e-30 15 CCTCAGCCTCCCAAG CCTCAGCCTCCCAAG + 3 11 3 1.09618e-08 2.52122e-07 2.52122e-07 12 CCTCAGCCTCCCAAG CTGCCTCAGCCTCCC - 4 4 0 2.42492e-34 5.57732e-33 1.11546e-32 15 TAGAGACGGGGTTTC TAGAGACGGGGTTTC + 4 15 1 8.63023e-13 1.98495e-11 1.98495e-11 14 TAGAGACGGGGTTTC GTAGAGACGGGGTTT + 5 5 0 4.76746e-36 1.09652e-34 2.19303e-34 15 GCCGGGCGTGGTGGC GCCGGGCGTGGTGGC + 6 6 0 1.17709e-41 2.70731e-40 5.41462e-40 15 GGCGGCGGCGGCGGC GGCGGCGGCGGCGGC + 6 20 0 5.43278e-09 1.24954e-07 1.24954e-07 15 GGCGGCGGCGGCGGC GGCGGCGGCGGCGGC - 6 11 4 0.00424553 0.0976472 0.0650981 11 GGCGGCGGCGGCGGC GGGAGGCTGAGGCAG + 7 7 0 4.46312e-32 1.02652e-30 2.05304e-30 15 CTCGGCTCACTGCAA CTCGGCTCACTGCAA + 7 18 2 1.30862e-06 3.00983e-05 3.00983e-05 11 CTCGGCTCACTGCAA ATCTCGGCTCACT - 8 8 0 1.82304e-35 4.19299e-34 8.38599e-34 15 TCAAGTGATCCTCCT TCAAGTGATCCTCCT + 8 17 0 2.93665e-12 6.75431e-11 6.75431e-11 10 TCAAGTGATCCTCCT TCAAGTGATC + 9 9 0 1.37303e-34 3.15796e-33 6.31593e-33 15 GGTCTCGAACTCCTG GGTCTCGAACTCCTG + 9 14 -2 5.59561e-13 1.28699e-11 1.28699e-11 13 GGTCTCGAACTCCTG TCTCGAACTCCTG - 10 10 0 6.81353e-35 1.56711e-33 3.13423e-33 15 GGAGTGCAGTGGCGC GGAGTGCAGTGGCGC + 10 21 -1 1.71789e-15 3.95114e-14 3.95114e-14 14 GGAGTGCAGTGGCGC GAGTGCAGTGGCGC + 11 11 0 9.45788e-32 2.17531e-30 4.35063e-30 15 GGGAGGCTGAGGCAG GGGAGGCTGAGGCAG + 11 3 3 6.78417e-08 1.56036e-06 1.56036e-06 12 GGGAGGCTGAGGCAG CTTGGGAGGCTGAGG - 11 20 -1 0.000697827 0.01605 0.0107 14 GGGAGGCTGAGGCAG GGCGGCGGCGGCGGC - 11 6 -1 0.00758086 0.17436 0.0871799 14 GGGAGGCTGAGGCAG GGCGGCGGCGGCGGC + 12 12 0 6.22236e-32 1.43114e-30 2.86229e-30 15 CTGTAATCCCAGCTA CTGTAATCCCAGCTA + 12 2 1 1.77796e-07 4.0893e-06 4.0893e-06 14 CTGTAATCCCAGCTA CCTGTAATCCCAGCT + 13 13 0 1.74308e-31 4.00907e-30 8.01815e-30 14 CAGCCTGGGCAACA CAGCCTGGGCAACA + 13 2 -1 0.000168737 0.00388096 0.00388096 13 CAGCCTGGGCAACA AGCTGGGATTACAGG - 14 14 0 3.23681e-33 7.44466e-32 1.48893e-31 13 CAGGAGTTCGAGA CAGGAGTTCGAGA + 14 9 0 1.67873e-13 3.86107e-12 3.86107e-12 13 CAGGAGTTCGAGA CAGGAGTTCGAGACC - 15 15 0 5.00995e-38 1.15229e-36 2.30458e-36 15 GTAGAGACGGGGTTT GTAGAGACGGGGTTT + 15 4 -1 1.6309e-14 3.75108e-13 3.75108e-13 14 GTAGAGACGGGGTTT TAGAGACGGGGTTTC + 16 16 0 1.17527e-35 2.70311e-34 5.40623e-34 15 AAAATTAGCCGGGCG AAAATTAGCCGGGCG + 17 17 0 1.01142e-20 2.32626e-19 4.65252e-19 10 TCAAGTGATC TCAAGTGATC + 17 8 0 1.0271e-10 2.36233e-09 2.36233e-09 10 TCAAGTGATC TCAAGTGATCCTCCT + 18 18 0 1.50049e-29 3.45112e-28 6.90223e-28 13 AGTGAGCCGAGAT AGTGAGCCGAGAT + 18 7 4 1.77383e-06 4.07981e-05 4.07981e-05 11 AGTGAGCCGAGAT TTGCAGTGAGCCGAG - 19 19 0 3.06124e-25 7.04085e-24 1.40817e-23 11 GCGTGAGCCAC GCGTGAGCCAC + 19 23 0 0.000889198 0.0204516 0.0204516 11 GCGTGAGCCAC GCGCCCGCCACCA + 20 20 0 4.27765e-35 9.8386e-34 1.96772e-33 15 GCCGCCGCCGCCGCC GCCGCCGCCGCCGCC + 20 6 0 6.03514e-07 1.38808e-05 1.38808e-05 15 GCCGCCGCCGCCGCC GCCGCCGCCGCCGCC - 20 11 -1 0.00223946 0.0515076 0.0343384 14 GCCGCCGCCGCCGCC CTGCCTCAGCCTCCC - 21 21 0 8.41787e-32 1.93611e-30 3.87222e-30 14 GAGTGCAGTGGCGC GAGTGCAGTGGCGC + 21 10 1 4.35266e-19 1.00111e-17 1.00111e-17 14 GAGTGCAGTGGCGC GGAGTGCAGTGGCGC + 22 22 0 2.09936e-17 4.82853e-16 9.65706e-16 9 GTATTTTTA GTATTTTTA + 22 1 7 0.00315784 0.0726303 0.0726303 8 GTATTTTTA TATTTTTGTATTTTT + 23 23 0 2.08796e-28 4.80231e-27 9.60463e-27 13 GCGCCCGCCACCA GCGCCCGCCACCA + 23 19 0 0.00180336 0.0414773 0.0414773 11 GCGCCCGCCACCA GCGTGAGCCAC + # Tomtom (Motif Comparison Tool): Version 5.4.1 compiled on Aug 1 2022 at 17:19:44 # The format of this file is described at https://meme-suite.org/meme/doc/tomtom-output-format.html. # tomtom -verbosity 1 -text -thresh 0.1 /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_5_peaks/combined.meme /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_5_peaks/combined.meme