Query_ID	Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query_consensus	Target_consensus	Orientation
CCTGTARTCCMRGCT	MA0107.1	-2	0.091563	0.366252	0.421222	10	CCTGTAATCCCAGCT	GGAAATTCCC	-
CCTGTARTCCMRGCT	MA0466.1	-3	0.131503	0.526013	0.421222	11	CCTGTAATCCCAGCT	ATTGTGCAATA	-
CCTGTARTCCMRGCT	MA0466.3	-2	0.205098	0.820391	0.421222	12	CCTGTAATCCCAGCT	TATTGCGCAATA	+
TAGAGAYRGGGTTTC	MA0107.1	-6	0.0250368	0.100147	0.200294	9	TAGAGACGGGGTTTC	GGGAATTTCC	+
TCAAGYGATYCTCCY	MA0107.1	-4	0.143863	0.57545	0.817247	10	TCAAGTGATCCTCCT	GGGAATTTCC	+
GGAGTGCAGTGGCRC	MA0466.1	0	0.118947	0.475789	0.759424	11	GGAGTGCAGTGGCGC	ATTGTGCAATA	-
GGAGTGCAGTGGCRC	MA0466.2	0	0.189856	0.759424	0.759424	10	GGAGTGCAGTGGCGC	ATTGCGCAAT	-

# Tomtom (Motif Comparison Tool): Version 5.4.1 compiled on Aug  1 2022 at 17:19:44
# The format of this file is described at https://meme-suite.org/meme/doc/tomtom-output-format.html.
# tomtom -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_5_peaks/meme_tomtom_out -min-overlap 5 -dist pearson -evalue -thresh 1 -no-ssc /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_5_peaks/meme_out/meme.xml combined.meme