<?xml version='1.0' encoding='UTF-8' standalone='yes'?>
<!-- Document definition -->
<!DOCTYPE MEME[
<!ELEMENT MEME (
  training_set,
  model, 
  motifs, 
  scanned_sites_summary?
)>
<!ATTLIST MEME 
  version CDATA #REQUIRED
  release CDATA #REQUIRED
>
<!-- Training-set elements -->
<!ELEMENT training_set (alphabet, ambigs, sequence*, letter_frequencies)>
<!ATTLIST training_set primary_sequences CDATA #REQUIRED primary_count CDATA #REQUIRED primary_positions CDATA #REQUIRED
  control_sequences CDATA "" control_count CDATA "" control_positions CDATA "">
<!ELEMENT alphabet (letter*)>
<!ATTLIST alphabet name CDATA #REQUIRED>
<!ELEMENT ambigs (letter*)>
<!ELEMENT letter EMPTY>
<!ATTLIST letter id ID #REQUIRED>
<!ATTLIST letter symbol CDATA #REQUIRED>
<!ATTLIST letter equals CDATA #IMPLIED>
<!ATTLIST letter aliases CDATA #IMPLIED>
<!ATTLIST letter complement CDATA #IMPLIED>
<!ATTLIST letter name CDATA #IMPLIED>
<!ATTLIST letter colour CDATA #IMPLIED>
<!ELEMENT sequence EMPTY>
<!ATTLIST sequence id ID #REQUIRED
                   name CDATA #REQUIRED
                   length CDATA #REQUIRED
                   weight CDATA #REQUIRED
>
<!ELEMENT letter_frequencies (alphabet_array)>

<!-- Model elements -->
<!ELEMENT model (
  command_line,
  host,
  type,
  nmotifs,
  evalue_threshold,
  object_function,
  spfun,
  min_width,
  max_width,
  wg,
  ws,
  endgaps,
  minsites,
  maxsites,
  wnsites,
  spmap,
  spfuzz,
  prior,
  beta,
  maxiter,
  distance,
  num_positions,
  seed,
  hsfrac,
  searchsize,
  maxsize,
  norand,
  csites,
  strands,
  brief,
  psp_file,
  priors_file,
  reason_for_stopping,
  background_frequencies
)>
<!ELEMENT command_line (#PCDATA)*>
<!ELEMENT host (#PCDATA)*>
<!ELEMENT type (#PCDATA)*>
<!ELEMENT nmotifs (#PCDATA)*>
<!ELEMENT evalue_threshold (#PCDATA)*>
<!ELEMENT object_function (#PCDATA)*>
<!ELEMENT spfun (#PCDATA)*>
<!ELEMENT min_width (#PCDATA)*>
<!ELEMENT max_width (#PCDATA)*>
<!ELEMENT wg (#PCDATA)*>
<!ELEMENT ws (#PCDATA)*>
<!ELEMENT endgaps (#PCDATA)*>
<!ELEMENT minsites (#PCDATA)*>
<!ELEMENT maxsites (#PCDATA)*>
<!ELEMENT wnsites (#PCDATA)*>
<!ELEMENT spmap (#PCDATA)*>
<!ELEMENT spfuzz (#PCDATA)*>
<!ELEMENT prior (#PCDATA)*>
<!ELEMENT beta (#PCDATA)*>
<!ELEMENT maxiter (#PCDATA)*>
<!ELEMENT distance (#PCDATA)*>
<!ELEMENT num_positions (#PCDATA)*>
<!ELEMENT seed (#PCDATA)*>
<!ELEMENT hsfrac (#PCDATA)*>
<!ELEMENT searchsize (#PCDATA)*>
<!ELEMENT maxsize (#PCDATA)*>
<!ELEMENT norand (#PCDATA)*>
<!ELEMENT csites (#PCDATA)*>
<!ELEMENT strands (#PCDATA)*>
<!ELEMENT brief (#PCDATA)*>
<!ELEMENT psp_file (#PCDATA)*>
<!ELEMENT priors_file (#PCDATA)*>
<!ELEMENT reason_for_stopping (#PCDATA)*>
<!ELEMENT background_frequencies (alphabet_array)>
<!ATTLIST background_frequencies source CDATA #REQUIRED
		   order CDATA #REQUIRED>

<!-- Motif elements -->
<!ELEMENT motifs (motif*)>
<!ELEMENT motif (scores, probabilities, regular_expression?, contributing_sites)>
<!ATTLIST motif id ID #REQUIRED
                name CDATA #REQUIRED
                alt CDATA ""
                width CDATA #REQUIRED
                sites CDATA #REQUIRED
                ic CDATA #REQUIRED
                re CDATA #REQUIRED
                llr CDATA #REQUIRED
                p_value CDATA #REQUIRED
                e_value CDATA #REQUIRED
                bayes_threshold CDATA #REQUIRED
                elapsed_time CDATA #REQUIRED
                url CDATA ""
>
<!ELEMENT scores (alphabet_matrix)>
<!ELEMENT probabilities (alphabet_matrix)>
<!ELEMENT regular_expression (#PCDATA)*>

<!-- Contributing site elements -->
<!-- Contributing sites are motif occurences found during the motif discovery phase -->
<!ELEMENT contributing_sites (contributing_site*)>
<!ELEMENT contributing_site (left_flank, site, right_flank)>
<!ATTLIST contributing_site sequence_id IDREF #REQUIRED
                          position CDATA #REQUIRED
                          strand (plus|minus|none) 'none'
                          pvalue CDATA #REQUIRED
>
<!-- The left_flank contains the sequence for 10 bases to the left of the motif start -->
<!ELEMENT left_flank (#PCDATA)>
<!-- The site contains the sequence for the motif instance -->
<!ELEMENT site (letter_ref*)>
<!-- The right_flank contains the sequence for 10 bases to the right of the motif end -->
<!ELEMENT right_flank (#PCDATA)>

<!-- Scanned site elements -->
<!-- Scanned sites are motif occurences found during the sequence scan phase -->
<!ELEMENT scanned_sites_summary (scanned_sites*)>
<!ATTLIST scanned_sites_summary p_thresh CDATA #REQUIRED>
<!ELEMENT scanned_sites (scanned_site*)>
<!ATTLIST scanned_sites sequence_id IDREF #REQUIRED
                        pvalue CDATA #REQUIRED
                        num_sites CDATA #REQUIRED>
<!ELEMENT scanned_site EMPTY>
<!ATTLIST scanned_site  motif_id IDREF #REQUIRED
                        strand (plus|minus|none) 'none'
                        position CDATA #REQUIRED
                        pvalue CDATA #REQUIRED>

<!-- Utility elements -->
<!-- A reference to a letter in the alphabet -->
<!ELEMENT letter_ref EMPTY>
<!ATTLIST letter_ref letter_id IDREF #REQUIRED>
<!-- A alphabet-array contains one floating point value for each letter in an alphabet -->
<!ELEMENT alphabet_array (value*)>
<!ELEMENT value (#PCDATA)>
<!ATTLIST value letter_id IDREF #REQUIRED>

<!-- A alphabet_matrix contains one alphabet_array for each position in a motif -->
<!ELEMENT alphabet_matrix (alphabet_array*)>

]>
<!-- Begin document body -->
<MEME version="5.4.1" release="Sat Aug 21 19:23:23 2021 -0700">
<training_set primary_sequences="/scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_5_peaks/seqs-centered" primary_count="10056" primary_positions="1005600" control_sequences="--none--" control_count="0" control_positions="0">
<alphabet name="DNA" like="dna">
<letter id="A" symbol="A" complement="T" name="Adenine" colour="CC0000"/>
<letter id="C" symbol="C" complement="G" name="Cytosine" colour="0000CC"/>
<letter id="G" symbol="G" complement="C" name="Guanine" colour="FFB300"/>
<letter id="T" symbol="T" aliases="U" complement="A" name="Thymine" colour="008000"/>
<letter id="N" symbol="N" aliases="X." equals="ACGT" name="Any base"/>
<letter id="V" symbol="V" equals="ACG" name="Not T"/>
<letter id="H" symbol="H" equals="ACT" name="Not G"/>
<letter id="D" symbol="D" equals="AGT" name="Not C"/>
<letter id="B" symbol="B" equals="CGT" name="Not A"/>
<letter id="M" symbol="M" equals="AC" name="Amino"/>
<letter id="R" symbol="R" equals="AG" name="Purine"/>
<letter id="W" symbol="W" equals="AT" name="Weak"/>
<letter id="S" symbol="S" equals="CG" name="Strong"/>
<letter id="Y" symbol="Y" equals="CT" name="Pyrimidine"/>
<letter id="K" symbol="K" equals="GT" name="Keto"/>
</alphabet>
<letter_frequencies>
<alphabet_array>
<value letter_id="A">0.195</value>
<value letter_id="C">0.305</value>
<value letter_id="G">0.305</value>
<value letter_id="T">0.195</value>
</alphabet_array>
</letter_frequencies>
</training_set>
<model>
<command_line>meme /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_5_peaks/seqs-centered -oc /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_5_peaks/meme_out -mod zoops -nmotifs 10 -minw 6 -maxw 15 -bfile /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_5_peaks/background -dna -revcomp -nostatus </command_line>
<host>fv-az119-924</host>
<type>zoops</type>
<nmotifs>10</nmotifs>
<evalue_threshold>inf</evalue_threshold>
<object_function>E-value of product of p-values</object_function>
<spfun>E-value of product of p-values</spfun>
<min_width>6</min_width>
<max_width>15</max_width>
<wg>11</wg>
<ws>1</ws>
<endgaps>yes</endgaps>
<substring>yes</substring>
<minsites>2</minsites>
<maxsites>10056</maxsites>
<wnsites>0.8</wnsites>
<spmap>uni</spmap>
<spfuzz>0.5</spfuzz>
<prior>dirichlet</prior>
<beta>0.01</beta>
<maxiter>50</maxiter>
<distance>1e-05</distance>
<num_positions>1005600</num_positions>
<seed>0</seed>
<hsfrac>0</hsfrac>
<searchsize>100000</searchsize>
<maxsize>0</maxsize>
<norand>no</norand>
<csites>1000</csites>
<strands>both</strands>
<brief>1000</brief>
<psp_file></psp_file>
<priors_file></priors_file>
<reason_for_stopping>Stopped because requested number of motifs (10) found.</reason_for_stopping>
<background_frequencies source="/scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_5_peaks/background" order="2">
<alphabet_array>
<value letter_id="A">0.193</value>
<value letter_id="C">0.307</value>
<value letter_id="G">0.307</value>
<value letter_id="T">0.193</value>
</alphabet_array>
</background_frequencies>
</model>
<motifs>
<motif id="motif_1" name="WWTTTTTKTWTTTTT" alt="MEME-1" width="15" sites="1552" ic="13.5" re="17.8" llr="19117" p_value="5.7e-944" e_value="6.2e-350" bayes_threshold="11.2232" elapsed_time="306.903405">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">117</value>
<value letter_id="C">-350</value>
<value letter_id="G">-373</value>
<value letter_id="T">142</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">113</value>
<value letter_id="C">-194</value>
<value letter_id="G">-145</value>
<value letter_id="T">100</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-50</value>
<value letter_id="C">-263</value>
<value letter_id="G">-309</value>
<value letter_id="T">201</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-119</value>
<value letter_id="C">-287</value>
<value letter_id="G">-121</value>
<value letter_id="T">194</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-107</value>
<value letter_id="C">-261</value>
<value letter_id="G">-233</value>
<value letter_id="T">205</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-90</value>
<value letter_id="C">-199</value>
<value letter_id="G">-297</value>
<value letter_id="T">202</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-172</value>
<value letter_id="C">-731</value>
<value letter_id="G">-1724</value>
<value letter_id="T">228</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-49</value>
<value letter_id="C">-127</value>
<value letter_id="G">31</value>
<value letter_id="T">87</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-302</value>
<value letter_id="C">-145</value>
<value letter_id="G">-437</value>
<value letter_id="T">214</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">140</value>
<value letter_id="C">-281</value>
<value letter_id="G">-285</value>
<value letter_id="T">107</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-49</value>
<value letter_id="C">-290</value>
<value letter_id="G">-191</value>
<value letter_id="T">194</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-342</value>
<value letter_id="C">-337</value>
<value letter_id="G">-112</value>
<value letter_id="T">207</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-242</value>
<value letter_id="C">-889</value>
<value letter_id="G">-213</value>
<value letter_id="T">221</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-95</value>
<value letter_id="C">-314</value>
<value letter_id="G">-233</value>
<value letter_id="T">206</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-24</value>
<value letter_id="C">-328</value>
<value letter_id="G">-290</value>
<value letter_id="T">198</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.434278</value>
<value letter_id="C">0.027062</value>
<value letter_id="G">0.023196</value>
<value letter_id="T">0.515464</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.421392</value>
<value letter_id="C">0.079897</value>
<value letter_id="G">0.112113</value>
<value letter_id="T">0.386598</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.136598</value>
<value letter_id="C">0.049613</value>
<value letter_id="G">0.036082</value>
<value letter_id="T">0.777706</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.084407</value>
<value letter_id="C">0.041881</value>
<value letter_id="G">0.132732</value>
<value letter_id="T">0.740979</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.092139</value>
<value letter_id="C">0.050258</value>
<value letter_id="G">0.061211</value>
<value letter_id="T">0.796392</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.103093</value>
<value letter_id="C">0.077320</value>
<value letter_id="G">0.039304</value>
<value letter_id="T">0.780284</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.058634</value>
<value letter_id="C">0.001933</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.939433</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.137242</value>
<value letter_id="C">0.127577</value>
<value letter_id="G">0.381443</value>
<value letter_id="T">0.353737</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.023840</value>
<value letter_id="C">0.112758</value>
<value letter_id="G">0.014820</value>
<value letter_id="T">0.848582</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.507732</value>
<value letter_id="C">0.043814</value>
<value letter_id="G">0.042526</value>
<value letter_id="T">0.405928</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.137242</value>
<value letter_id="C">0.041237</value>
<value letter_id="G">0.081830</value>
<value letter_id="T">0.739691</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.018041</value>
<value letter_id="C">0.029639</value>
<value letter_id="G">0.141753</value>
<value letter_id="T">0.810567</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.036082</value>
<value letter_id="C">0.000644</value>
<value letter_id="G">0.070232</value>
<value letter_id="T">0.893041</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.099871</value>
<value letter_id="C">0.034794</value>
<value letter_id="G">0.061211</value>
<value letter_id="T">0.804124</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.163660</value>
<value letter_id="C">0.031572</value>
<value letter_id="G">0.041237</value>
<value letter_id="T">0.763531</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[TA][AT]TTTTT[GT]T[AT]TTTTT
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_2" name="CCTGTARTCCMRGCT" alt="MEME-2" width="15" sites="1001" ic="18.3" re="18.4" llr="12752" p_value="1.7e-607" e_value="2.7e-181" bayes_threshold="11.4803" elapsed_time="548.941042">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-442</value>
<value letter_id="C">133</value>
<value letter_id="G">-509</value>
<value letter_id="T">12</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-17</value>
<value letter_id="C">126</value>
<value letter_id="G">-356</value>
<value letter_id="T">-153</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1661</value>
<value letter_id="C">-568</value>
<value letter_id="G">-1661</value>
<value letter_id="T">237</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-122</value>
<value letter_id="C">-568</value>
<value letter_id="G">156</value>
<value letter_id="T">-559</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-459</value>
<value letter_id="C">-380</value>
<value letter_id="G">-1661</value>
<value letter_id="T">233</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">159</value>
<value letter_id="C">-132</value>
<value letter_id="G">-291</value>
<value letter_id="T">40</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">148</value>
<value letter_id="C">-480</value>
<value letter_id="G">54</value>
<value letter_id="T">-659</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1661</value>
<value letter_id="C">-32</value>
<value letter_id="G">-120</value>
<value letter_id="T">169</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1661</value>
<value letter_id="C">158</value>
<value letter_id="G">-509</value>
<value letter_id="T">-146</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-342</value>
<value letter_id="C">159</value>
<value letter_id="G">-594</value>
<value letter_id="T">-192</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">101</value>
<value letter_id="C">89</value>
<value letter_id="G">-1661</value>
<value letter_id="T">-213</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">168</value>
<value letter_id="C">-1661</value>
<value letter_id="G">31</value>
<value letter_id="T">-1661</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-255</value>
<value letter_id="C">-409</value>
<value letter_id="G">161</value>
<value letter_id="T">-389</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-242</value>
<value letter_id="C">158</value>
<value letter_id="G">-480</value>
<value letter_id="T">-246</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">54</value>
<value letter_id="C">-568</value>
<value letter_id="G">-494</value>
<value letter_id="T">187</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.008991</value>
<value letter_id="C">0.772228</value>
<value letter_id="G">0.008991</value>
<value letter_id="T">0.209790</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.171828</value>
<value letter_id="C">0.735265</value>
<value letter_id="G">0.025974</value>
<value letter_id="T">0.066933</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.005994</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.994006</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.082917</value>
<value letter_id="C">0.005994</value>
<value letter_id="G">0.907093</value>
<value letter_id="T">0.003996</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.007992</value>
<value letter_id="C">0.021978</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.970030</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.582418</value>
<value letter_id="C">0.122877</value>
<value letter_id="G">0.040959</value>
<value letter_id="T">0.253746</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.539461</value>
<value letter_id="C">0.010989</value>
<value letter_id="G">0.447552</value>
<value letter_id="T">0.001998</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.245754</value>
<value letter_id="G">0.133866</value>
<value letter_id="T">0.620380</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.921079</value>
<value letter_id="G">0.008991</value>
<value letter_id="T">0.069930</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.017982</value>
<value letter_id="C">0.926074</value>
<value letter_id="G">0.004995</value>
<value letter_id="T">0.050949</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.388611</value>
<value letter_id="C">0.567433</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.043956</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.618382</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.381618</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.032967</value>
<value letter_id="C">0.017982</value>
<value letter_id="G">0.936064</value>
<value letter_id="T">0.012987</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.035964</value>
<value letter_id="C">0.918082</value>
<value letter_id="G">0.010989</value>
<value letter_id="T">0.034965</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.279720</value>
<value letter_id="C">0.005994</value>
<value letter_id="G">0.009990</value>
<value letter_id="T">0.704296</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[CT]CTGT[AT][AG][TC]CC[CA][AG]GC[TA]
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_3" name="CCTCAGCCTCCCRAR" alt="MEME-3" width="15" sites="670" ic="21.3" re="20.4" llr="9488" p_value="7.7e-463" e_value="1.1e-157" bayes_threshold="12.1888" elapsed_time="787.007440">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-384</value>
<value letter_id="C">157</value>
<value letter_id="G">-451</value>
<value letter_id="T">-169</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1603</value>
<value letter_id="C">159</value>
<value letter_id="G">-488</value>
<value letter_id="T">-162</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-421</value>
<value letter_id="C">-488</value>
<value letter_id="G">-668</value>
<value letter_id="T">234</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1603</value>
<value letter_id="C">143</value>
<value letter_id="G">-488</value>
<value letter_id="T">-26</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">160</value>
<value letter_id="C">-210</value>
<value letter_id="G">-10</value>
<value letter_id="T">-180</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-143</value>
<value letter_id="C">-1603</value>
<value letter_id="G">160</value>
<value letter_id="T">-1603</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1603</value>
<value letter_id="C">166</value>
<value letter_id="G">-1603</value>
<value letter_id="T">-255</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1603</value>
<value letter_id="C">164</value>
<value letter_id="G">-1603</value>
<value letter_id="T">-226</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1603</value>
<value letter_id="C">-536</value>
<value letter_id="G">-1603</value>
<value letter_id="T">236</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-701</value>
<value letter_id="C">163</value>
<value letter_id="G">-1603</value>
<value letter_id="T">-211</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1603</value>
<value letter_id="C">163</value>
<value letter_id="G">-1603</value>
<value letter_id="T">-193</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-301</value>
<value letter_id="C">132</value>
<value letter_id="G">-436</value>
<value letter_id="T">3</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">162</value>
<value letter_id="C">-323</value>
<value letter_id="G">23</value>
<value letter_id="T">-384</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">215</value>
<value letter_id="C">-1603</value>
<value letter_id="G">-107</value>
<value letter_id="T">-1603</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">122</value>
<value letter_id="C">-468</value>
<value letter_id="G">81</value>
<value letter_id="T">-1603</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.013433</value>
<value letter_id="C">0.913433</value>
<value letter_id="G">0.013433</value>
<value letter_id="T">0.059701</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.926866</value>
<value letter_id="G">0.010448</value>
<value letter_id="T">0.062687</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.010448</value>
<value letter_id="C">0.010448</value>
<value letter_id="G">0.002985</value>
<value letter_id="T">0.976119</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.828358</value>
<value letter_id="G">0.010448</value>
<value letter_id="T">0.161194</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.586567</value>
<value letter_id="C">0.071642</value>
<value letter_id="G">0.286567</value>
<value letter_id="T">0.055224</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.071642</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.928358</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.967164</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.032836</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.959701</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.040299</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.007463</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.992537</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.001493</value>
<value letter_id="C">0.953731</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.044776</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.949254</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.050746</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.023881</value>
<value letter_id="C">0.764179</value>
<value letter_id="G">0.014925</value>
<value letter_id="T">0.197015</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.594030</value>
<value letter_id="C">0.032836</value>
<value letter_id="G">0.359701</value>
<value letter_id="T">0.013433</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.853731</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.146269</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.450746</value>
<value letter_id="C">0.011940</value>
<value letter_id="G">0.537313</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
CCTC[AG]GCCTCCC[AG]A[GA]
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_4" name="TAGAGAYRGGGTTTC" alt="MEME-4" width="15" sites="425" ic="20.8" re="21.7" llr="6397" p_value="1.1e-356" e_value="5.2e-115" bayes_threshold="12.6322" elapsed_time="1022.536485">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-436</value>
<value letter_id="C">-222</value>
<value letter_id="G">-1538</value>
<value letter_id="T">226</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">193</value>
<value letter_id="C">-702</value>
<value letter_id="G">-264</value>
<value letter_id="T">15</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-255</value>
<value letter_id="C">-371</value>
<value letter_id="G">162</value>
<value letter_id="T">-635</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">237</value>
<value letter_id="C">-1538</value>
<value letter_id="G">-1538</value>
<value letter_id="T">-1538</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-227</value>
<value letter_id="C">-403</value>
<value letter_id="G">159</value>
<value letter_id="T">-355</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">227</value>
<value letter_id="C">-371</value>
<value letter_id="G">-312</value>
<value letter_id="T">-403</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-635</value>
<value letter_id="C">95</value>
<value letter_id="G">-403</value>
<value letter_id="T">99</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">94</value>
<value letter_id="C">-444</value>
<value letter_id="G">99</value>
<value letter_id="T">-536</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-100</value>
<value letter_id="C">-702</value>
<value letter_id="G">151</value>
<value letter_id="T">-304</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">34</value>
<value letter_id="C">-702</value>
<value letter_id="G">129</value>
<value letter_id="T">-1538</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-127</value>
<value letter_id="C">-702</value>
<value letter_id="G">155</value>
<value letter_id="T">-319</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1538</value>
<value letter_id="C">-344</value>
<value letter_id="G">-422</value>
<value letter_id="T">231</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-436</value>
<value letter_id="C">7</value>
<value letter_id="G">-1538</value>
<value letter_id="T">179</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1538</value>
<value letter_id="C">-702</value>
<value letter_id="G">-702</value>
<value letter_id="T">237</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-477</value>
<value letter_id="C">134</value>
<value letter_id="G">-1538</value>
<value letter_id="T">17</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.009412</value>
<value letter_id="C">0.065882</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.924706</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.734118</value>
<value letter_id="C">0.002353</value>
<value letter_id="G">0.049412</value>
<value letter_id="T">0.214118</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.032941</value>
<value letter_id="C">0.023529</value>
<value letter_id="G">0.941176</value>
<value letter_id="T">0.002353</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">1.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.040000</value>
<value letter_id="C">0.018824</value>
<value letter_id="G">0.924706</value>
<value letter_id="T">0.016471</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.929412</value>
<value letter_id="C">0.023529</value>
<value letter_id="G">0.035294</value>
<value letter_id="T">0.011765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.002353</value>
<value letter_id="C">0.595294</value>
<value letter_id="G">0.018824</value>
<value letter_id="T">0.383529</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.369412</value>
<value letter_id="C">0.014118</value>
<value letter_id="G">0.611765</value>
<value letter_id="T">0.004706</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.096471</value>
<value letter_id="C">0.002353</value>
<value letter_id="G">0.877647</value>
<value letter_id="T">0.023529</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.244706</value>
<value letter_id="C">0.002353</value>
<value letter_id="G">0.752941</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.080000</value>
<value letter_id="C">0.002353</value>
<value letter_id="G">0.896471</value>
<value letter_id="T">0.021176</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.028235</value>
<value letter_id="G">0.016471</value>
<value letter_id="T">0.955294</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.009412</value>
<value letter_id="C">0.322353</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.668235</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.002353</value>
<value letter_id="G">0.002353</value>
<value letter_id="T">0.995294</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.007059</value>
<value letter_id="C">0.776471</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.216471</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
T[AT]GAGA[CT][GA]G[GA]GT[TC]T[CT]
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_5" name="GCYRGGCRTGGTGGC" alt="MEME-5" width="15" sites="448" ic="21.6" re="19.6" llr="6087" p_value="1.3e-342" e_value="9.3e-091" bayes_threshold="12.5843" elapsed_time="1255.796550">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-311</value>
<value letter_id="C">-510</value>
<value letter_id="G">162</value>
<value letter_id="T">-297</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-443</value>
<value letter_id="C">163</value>
<value letter_id="G">-1545</value>
<value letter_id="T">-226</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1545</value>
<value letter_id="C">104</value>
<value letter_id="G">-610</value>
<value letter_id="T">92</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">81</value>
<value letter_id="C">-1545</value>
<value letter_id="G">111</value>
<value letter_id="T">-1545</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1545</value>
<value letter_id="C">-1545</value>
<value letter_id="G">170</value>
<value letter_id="T">-1545</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1545</value>
<value letter_id="C">-1545</value>
<value letter_id="G">170</value>
<value letter_id="T">-1545</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-297</value>
<value letter_id="C">121</value>
<value letter_id="G">-510</value>
<value letter_id="T">41</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">100</value>
<value letter_id="C">-1545</value>
<value letter_id="G">95</value>
<value letter_id="T">-311</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1545</value>
<value letter_id="C">7</value>
<value letter_id="G">-610</value>
<value letter_id="T">181</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-30</value>
<value letter_id="C">-410</value>
<value letter_id="G">141</value>
<value letter_id="T">-411</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-211</value>
<value letter_id="C">-410</value>
<value letter_id="G">161</value>
<value letter_id="T">-1545</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1545</value>
<value letter_id="C">-378</value>
<value letter_id="G">-452</value>
<value letter_id="T">232</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-253</value>
<value letter_id="C">-710</value>
<value letter_id="G">165</value>
<value letter_id="T">-1545</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-285</value>
<value letter_id="C">-1545</value>
<value letter_id="G">166</value>
<value letter_id="T">-1545</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-485</value>
<value letter_id="C">139</value>
<value letter_id="G">-1545</value>
<value letter_id="T">-4</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.022321</value>
<value letter_id="C">0.008929</value>
<value letter_id="G">0.944196</value>
<value letter_id="T">0.024554</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.008929</value>
<value letter_id="C">0.950893</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.040179</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.631696</value>
<value letter_id="G">0.004464</value>
<value letter_id="T">0.363839</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.337054</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.662946</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">1.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">1.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.024554</value>
<value letter_id="C">0.709821</value>
<value letter_id="G">0.008929</value>
<value letter_id="T">0.256696</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.386161</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.591518</value>
<value letter_id="T">0.022321</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.321429</value>
<value letter_id="G">0.004464</value>
<value letter_id="T">0.674107</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.156250</value>
<value letter_id="C">0.017857</value>
<value letter_id="G">0.814732</value>
<value letter_id="T">0.011161</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.044643</value>
<value letter_id="C">0.017857</value>
<value letter_id="G">0.937500</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.022321</value>
<value letter_id="G">0.013393</value>
<value letter_id="T">0.964286</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.033482</value>
<value letter_id="C">0.002232</value>
<value letter_id="G">0.964286</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.026786</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.973214</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.006696</value>
<value letter_id="C">0.805804</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.187500</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
GC[CT][GA]GG[CT][GA][TC]GGTGGC
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_6" name="GGCGGSGGCGGSGGC" alt="MEME-6" width="15" sites="1180" ic="17.2" re="13.5" llr="11009" p_value="3.9e-610" e_value="6.4e-066" bayes_threshold="11.3189" elapsed_time="1488.323525">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-1685</value>
<value letter_id="C">-104</value>
<value letter_id="G">147</value>
<value letter_id="T">-1685</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-425</value>
<value letter_id="C">-750</value>
<value letter_id="G">169</value>
<value letter_id="T">-1685</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-105</value>
<value letter_id="C">141</value>
<value letter_id="G">-325</value>
<value letter_id="T">-176</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-59</value>
<value letter_id="C">-103</value>
<value letter_id="G">118</value>
<value letter_id="T">-292</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-231</value>
<value letter_id="C">-275</value>
<value letter_id="G">158</value>
<value letter_id="T">-1685</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-351</value>
<value letter_id="C">87</value>
<value letter_id="G">32</value>
<value letter_id="T">-237</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-174</value>
<value letter_id="C">-398</value>
<value letter_id="G">157</value>
<value letter_id="T">-437</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-101</value>
<value letter_id="C">-433</value>
<value letter_id="G">150</value>
<value letter_id="T">-337</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-266</value>
<value letter_id="C">154</value>
<value letter_id="G">-592</value>
<value letter_id="T">-147</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-179</value>
<value letter_id="C">-72</value>
<value letter_id="G">116</value>
<value letter_id="T">-144</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1685</value>
<value letter_id="C">-241</value>
<value letter_id="G">162</value>
<value letter_id="T">-1685</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-344</value>
<value letter_id="C">92</value>
<value letter_id="G">39</value>
<value letter_id="T">-1685</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-166</value>
<value letter_id="C">-201</value>
<value letter_id="G">140</value>
<value letter_id="T">-190</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-135</value>
<value letter_id="C">-46</value>
<value letter_id="G">110</value>
<value letter_id="T">-225</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-308</value>
<value letter_id="C">109</value>
<value letter_id="G">-7</value>
<value letter_id="T">-258</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.149153</value>
<value letter_id="G">0.850847</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.010169</value>
<value letter_id="C">0.001695</value>
<value letter_id="G">0.988136</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.093220</value>
<value letter_id="C">0.817797</value>
<value letter_id="G">0.032203</value>
<value letter_id="T">0.056780</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.127966</value>
<value letter_id="C">0.150000</value>
<value letter_id="G">0.696610</value>
<value letter_id="T">0.025424</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.038983</value>
<value letter_id="C">0.045763</value>
<value letter_id="G">0.915254</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.016949</value>
<value letter_id="C">0.562712</value>
<value letter_id="G">0.383051</value>
<value letter_id="T">0.037288</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.057627</value>
<value letter_id="C">0.019492</value>
<value letter_id="G">0.913559</value>
<value letter_id="T">0.009322</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.095763</value>
<value letter_id="C">0.015254</value>
<value letter_id="G">0.870339</value>
<value letter_id="T">0.018644</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.030508</value>
<value letter_id="C">0.894915</value>
<value letter_id="G">0.005085</value>
<value letter_id="T">0.069492</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.055932</value>
<value letter_id="C">0.186441</value>
<value letter_id="G">0.686441</value>
<value letter_id="T">0.071186</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.057627</value>
<value letter_id="G">0.942373</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.017797</value>
<value letter_id="C">0.580508</value>
<value letter_id="G">0.401695</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.061017</value>
<value letter_id="C">0.076271</value>
<value letter_id="G">0.811017</value>
<value letter_id="T">0.051695</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.075424</value>
<value letter_id="C">0.223729</value>
<value letter_id="G">0.660169</value>
<value letter_id="T">0.040678</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.022881</value>
<value letter_id="C">0.651695</value>
<value letter_id="G">0.293220</value>
<value letter_id="T">0.032203</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
GGCGG[CG]GGCGG[CG]G[GC][CG]
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_7" name="CTYRGCTCACTGCAA" alt="MEME-7" width="15" sites="208" ic="24.7" re="24.7" llr="3566" p_value="8.8e-198" e_value="7.0e-066" bayes_threshold="13.6515" elapsed_time="1713.178899">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-1434</value>
<value letter_id="C">166</value>
<value letter_id="G">-1434</value>
<value letter_id="T">-274</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-80</value>
<value letter_id="C">-1434</value>
<value letter_id="G">-1434</value>
<value letter_id="T">220</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1434</value>
<value letter_id="C">105</value>
<value letter_id="G">-1434</value>
<value letter_id="T">92</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">82</value>
<value letter_id="C">-441</value>
<value letter_id="G">101</value>
<value letter_id="T">-300</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-200</value>
<value letter_id="C">-1434</value>
<value letter_id="G">162</value>
<value letter_id="T">-532</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1434</value>
<value letter_id="C">164</value>
<value letter_id="G">-400</value>
<value letter_id="T">-300</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1434</value>
<value letter_id="C">-1434</value>
<value letter_id="G">-1434</value>
<value letter_id="T">237</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1434</value>
<value letter_id="C">170</value>
<value letter_id="G">-1434</value>
<value letter_id="T">-1434</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">234</value>
<value letter_id="C">-1434</value>
<value letter_id="G">-367</value>
<value letter_id="T">-1434</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1434</value>
<value letter_id="C">170</value>
<value letter_id="G">-1434</value>
<value letter_id="T">-1434</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1434</value>
<value letter_id="C">-230</value>
<value letter_id="G">-1434</value>
<value letter_id="T">228</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-133</value>
<value letter_id="C">-1434</value>
<value letter_id="G">159</value>
<value letter_id="T">-1434</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-532</value>
<value letter_id="C">170</value>
<value letter_id="G">-1434</value>
<value letter_id="T">-1434</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">235</value>
<value letter_id="C">-1434</value>
<value letter_id="G">-400</value>
<value letter_id="T">-1434</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">207</value>
<value letter_id="C">-500</value>
<value letter_id="G">-79</value>
<value letter_id="T">-1434</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.971154</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.028846</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.110577</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.889423</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.634615</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.365385</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.341346</value>
<value letter_id="C">0.014423</value>
<value letter_id="G">0.620192</value>
<value letter_id="T">0.024038</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.048077</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.947115</value>
<value letter_id="T">0.004808</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.956731</value>
<value letter_id="G">0.019231</value>
<value letter_id="T">0.024038</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">1.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.975962</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.024038</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">1.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.062500</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.937500</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.076923</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.923077</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.004808</value>
<value letter_id="C">0.995192</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.980769</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.019231</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.812500</value>
<value letter_id="C">0.009615</value>
<value letter_id="G">0.177885</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
CT[CT][GA]GCTCACTGCAA
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_8" name="TCAAGYGATYCTCCY" alt="MEME-8" width="15" sites="515" ic="19.3" re="20.0" llr="7128" p_value="3.6e-259" e_value="2.0e-062" bayes_threshold="12.0394" elapsed_time="1936.097858">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-1565</value>
<value letter_id="C">-188</value>
<value letter_id="G">-572</value>
<value letter_id="T">224</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-463</value>
<value letter_id="C">167</value>
<value letter_id="G">-1565</value>
<value letter_id="T">-363</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">226</value>
<value letter_id="C">-1565</value>
<value letter_id="G">-630</value>
<value letter_id="T">-139</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">181</value>
<value letter_id="C">-155</value>
<value letter_id="G">-68</value>
<value letter_id="T">-283</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-224</value>
<value letter_id="C">-1565</value>
<value letter_id="G">164</value>
<value letter_id="T">-1565</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-263</value>
<value letter_id="C">31</value>
<value letter_id="G">-314</value>
<value letter_id="T">152</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">20</value>
<value letter_id="C">-255</value>
<value letter_id="G">123</value>
<value letter_id="T">-505</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">235</value>
<value letter_id="C">-1565</value>
<value letter_id="G">-430</value>
<value letter_id="T">-663</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1565</value>
<value letter_id="C">-413</value>
<value letter_id="G">-472</value>
<value letter_id="T">233</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-505</value>
<value letter_id="C">86</value>
<value letter_id="G">-1565</value>
<value letter_id="T">118</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-317</value>
<value letter_id="C">143</value>
<value letter_id="G">-498</value>
<value letter_id="T">-44</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">1</value>
<value letter_id="C">-1565</value>
<value letter_id="G">-63</value>
<value letter_id="T">166</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-363</value>
<value letter_id="C">160</value>
<value letter_id="G">-630</value>
<value letter_id="T">-205</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-346</value>
<value letter_id="C">159</value>
<value letter_id="G">-498</value>
<value letter_id="T">-205</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-293</value>
<value letter_id="C">19</value>
<value letter_id="G">-450</value>
<value letter_id="T">166</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.083495</value>
<value letter_id="G">0.005825</value>
<value letter_id="T">0.910680</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.007767</value>
<value letter_id="C">0.976699</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.015534</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.922330</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.003883</value>
<value letter_id="T">0.073786</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.675728</value>
<value letter_id="C">0.104854</value>
<value letter_id="G">0.192233</value>
<value letter_id="T">0.027184</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.040777</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.959223</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.031068</value>
<value letter_id="C">0.380583</value>
<value letter_id="G">0.034951</value>
<value letter_id="T">0.553398</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.221359</value>
<value letter_id="C">0.052427</value>
<value letter_id="G">0.720388</value>
<value letter_id="T">0.005825</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.982524</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.015534</value>
<value letter_id="T">0.001942</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.017476</value>
<value letter_id="G">0.011650</value>
<value letter_id="T">0.970874</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.005825</value>
<value letter_id="C">0.557282</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.436893</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.021359</value>
<value letter_id="C">0.827184</value>
<value letter_id="G">0.009709</value>
<value letter_id="T">0.141748</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.194175</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.198058</value>
<value letter_id="T">0.607767</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.015534</value>
<value letter_id="C">0.933981</value>
<value letter_id="G">0.003883</value>
<value letter_id="T">0.046602</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.017476</value>
<value letter_id="C">0.926214</value>
<value letter_id="G">0.009709</value>
<value letter_id="T">0.046602</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.025243</value>
<value letter_id="C">0.351456</value>
<value letter_id="G">0.013592</value>
<value letter_id="T">0.609709</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
TCAAG[TC][GA]AT[CT]CTCC[TC]
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_9" name="GGTCTCGAACTCCTG" alt="MEME-9" width="15" sites="310" ic="22.9" re="23.0" llr="4936" p_value="4.1e-212" e_value="7.8e-062" bayes_threshold="12.8991" elapsed_time="2157.961908">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-126</value>
<value letter_id="C">-1492</value>
<value letter_id="G">156</value>
<value letter_id="T">-390</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-190</value>
<value letter_id="C">-1492</value>
<value letter_id="G">163</value>
<value letter_id="T">-1492</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1492</value>
<value letter_id="C">-218</value>
<value letter_id="G">-1492</value>
<value letter_id="T">227</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-490</value>
<value letter_id="C">164</value>
<value letter_id="G">-557</value>
<value letter_id="T">-273</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1492</value>
<value letter_id="C">-399</value>
<value letter_id="G">-657</value>
<value letter_id="T">234</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-432</value>
<value letter_id="C">115</value>
<value letter_id="G">-1492</value>
<value letter_id="T">67</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">64</value>
<value letter_id="C">-340</value>
<value letter_id="G">109</value>
<value letter_id="T">-358</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">236</value>
<value letter_id="C">-1492</value>
<value letter_id="G">-457</value>
<value letter_id="T">-1492</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">202</value>
<value letter_id="C">-399</value>
<value letter_id="G">-399</value>
<value letter_id="T">-9</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1492</value>
<value letter_id="C">163</value>
<value letter_id="G">-1492</value>
<value letter_id="T">-190</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-332</value>
<value letter_id="C">-311</value>
<value letter_id="G">-399</value>
<value letter_id="T">226</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1492</value>
<value letter_id="C">161</value>
<value letter_id="G">-457</value>
<value letter_id="T">-200</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1492</value>
<value letter_id="C">161</value>
<value letter_id="G">-657</value>
<value letter_id="T">-165</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-390</value>
<value letter_id="C">-257</value>
<value letter_id="G">-1492</value>
<value letter_id="T">228</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-144</value>
<value letter_id="C">-1492</value>
<value letter_id="G">159</value>
<value letter_id="T">-490</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.080645</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.906452</value>
<value letter_id="T">0.012903</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.051613</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.948387</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.067742</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.932258</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.006452</value>
<value letter_id="C">0.958065</value>
<value letter_id="G">0.006452</value>
<value letter_id="T">0.029032</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.019355</value>
<value letter_id="G">0.003226</value>
<value letter_id="T">0.977419</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.009677</value>
<value letter_id="C">0.683871</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.306452</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.300000</value>
<value letter_id="C">0.029032</value>
<value letter_id="G">0.654839</value>
<value letter_id="T">0.016129</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.987097</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.012903</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.780645</value>
<value letter_id="C">0.019355</value>
<value letter_id="G">0.019355</value>
<value letter_id="T">0.180645</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.948387</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.051613</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.019355</value>
<value letter_id="C">0.035484</value>
<value letter_id="G">0.019355</value>
<value letter_id="T">0.925806</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.938710</value>
<value letter_id="G">0.012903</value>
<value letter_id="T">0.048387</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.935484</value>
<value letter_id="G">0.003226</value>
<value letter_id="T">0.061290</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.012903</value>
<value letter_id="C">0.051613</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.935484</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.070968</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.922581</value>
<value letter_id="T">0.006452</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
GGTCT[CT][GA]AACTCCTG
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_10" name="GGAGTGCAGTGGCRC" alt="MEME-10" width="15" sites="207" ic="23.6" re="22.8" llr="3266" p_value="1.4e-183" e_value="5.8e-048" bayes_threshold="13.1889" elapsed_time="2378.655728">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-123</value>
<value letter_id="C">-599</value>
<value letter_id="G">157</value>
<value letter_id="T">-1434</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-332</value>
<value letter_id="C">-340</value>
<value letter_id="G">163</value>
<value letter_id="T">-1434</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">232</value>
<value letter_id="C">-1434</value>
<value letter_id="G">-340</value>
<value letter_id="T">-432</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-151</value>
<value letter_id="C">-499</value>
<value letter_id="G">159</value>
<value letter_id="T">-1434</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1434</value>
<value letter_id="C">-1434</value>
<value letter_id="G">-1434</value>
<value letter_id="T">237</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-173</value>
<value letter_id="C">-1434</value>
<value letter_id="G">162</value>
<value letter_id="T">-1434</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1434</value>
<value letter_id="C">167</value>
<value letter_id="G">-1434</value>
<value letter_id="T">-300</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">231</value>
<value letter_id="C">-440</value>
<value letter_id="G">-340</value>
<value letter_id="T">-1434</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-11</value>
<value letter_id="C">-1434</value>
<value letter_id="G">140</value>
<value letter_id="T">-432</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1434</value>
<value letter_id="C">-282</value>
<value letter_id="G">-1434</value>
<value letter_id="T">231</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-232</value>
<value letter_id="C">-1434</value>
<value letter_id="G">165</value>
<value letter_id="T">-1434</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1434</value>
<value letter_id="C">-1434</value>
<value letter_id="G">170</value>
<value letter_id="T">-1434</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-332</value>
<value letter_id="C">117</value>
<value letter_id="G">-1434</value>
<value letter_id="T">59</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">127</value>
<value letter_id="C">-1434</value>
<value letter_id="G">80</value>
<value letter_id="T">-1434</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1434</value>
<value letter_id="C">124</value>
<value letter_id="G">-499</value>
<value letter_id="T">46</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.082126</value>
<value letter_id="C">0.004831</value>
<value letter_id="G">0.913043</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.019324</value>
<value letter_id="C">0.028986</value>
<value letter_id="G">0.951691</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.961353</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.028986</value>
<value letter_id="T">0.009662</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.067633</value>
<value letter_id="C">0.009662</value>
<value letter_id="G">0.922705</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.057971</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.942029</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.975845</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.024155</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.956522</value>
<value letter_id="C">0.014493</value>
<value letter_id="G">0.028986</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.178744</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.811594</value>
<value letter_id="T">0.009662</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.043478</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.956522</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.038647</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.961353</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">1.000000</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.019324</value>
<value letter_id="C">0.690821</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.289855</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.463768</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.536232</value>
<value letter_id="T">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.724638</value>
<value letter_id="G">0.009662</value>
<value letter_id="T">0.265700</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
GGAGTGCAGTGG[CT][GA][CT]
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
</motifs>
</MEME>
