Query_ID	Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query_consensus	Target_consensus	Orientation
TAATCCCAGCWMYTT	MA0107.1	2	0.130293	0.521174	0.992333	8	TAATCCCAGCACTTT	GGAAATTCCC	-
GGGTYTCRCYMTGTT	MA0466.1	-1	0.0381891	0.152756	0.305513	11	GGGTTTCACCATGTT	TATTGCACAAT	+
GGGTYTCRCYMTGTT	MA0466.2	-2	0.0835606	0.334242	0.333807	10	GGGTTTCACCATGTT	ATTGCGCAAT	-
GGGTYTCRCYMTGTT	MA0107.1	2	0.166903	0.667613	0.333807	8	GGGTTTCACCATGTT	GGGAATTTCC	+

# Tomtom (Motif Comparison Tool): Version 5.4.1 compiled on Aug  1 2022 at 17:19:44
# The format of this file is described at https://meme-suite.org/meme/doc/tomtom-output-format.html.
# tomtom -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_4_peaks/meme_tomtom_out -min-overlap 5 -dist pearson -evalue -thresh 1 -no-ssc /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_4_peaks/meme_out/meme.xml combined.meme