<?xml version='1.0' encoding='UTF-8' standalone='yes'?>
<!-- Document definition -->
<!DOCTYPE MEME[
<!ELEMENT MEME (
  training_set,
  model, 
  motifs, 
  scanned_sites_summary?
)>
<!ATTLIST MEME 
  version CDATA #REQUIRED
  release CDATA #REQUIRED
>
<!-- Training-set elements -->
<!ELEMENT training_set (alphabet, ambigs, sequence*, letter_frequencies)>
<!ATTLIST training_set primary_sequences CDATA #REQUIRED primary_count CDATA #REQUIRED primary_positions CDATA #REQUIRED
  control_sequences CDATA "" control_count CDATA "" control_positions CDATA "">
<!ELEMENT alphabet (letter*)>
<!ATTLIST alphabet name CDATA #REQUIRED>
<!ELEMENT ambigs (letter*)>
<!ELEMENT letter EMPTY>
<!ATTLIST letter id ID #REQUIRED>
<!ATTLIST letter symbol CDATA #REQUIRED>
<!ATTLIST letter equals CDATA #IMPLIED>
<!ATTLIST letter aliases CDATA #IMPLIED>
<!ATTLIST letter complement CDATA #IMPLIED>
<!ATTLIST letter name CDATA #IMPLIED>
<!ATTLIST letter colour CDATA #IMPLIED>
<!ELEMENT sequence EMPTY>
<!ATTLIST sequence id ID #REQUIRED
                   name CDATA #REQUIRED
                   length CDATA #REQUIRED
                   weight CDATA #REQUIRED
>
<!ELEMENT letter_frequencies (alphabet_array)>

<!-- Model elements -->
<!ELEMENT model (
  command_line,
  host,
  type,
  nmotifs,
  evalue_threshold,
  object_function,
  spfun,
  min_width,
  max_width,
  wg,
  ws,
  endgaps,
  minsites,
  maxsites,
  wnsites,
  spmap,
  spfuzz,
  prior,
  beta,
  maxiter,
  distance,
  num_positions,
  seed,
  hsfrac,
  searchsize,
  maxsize,
  norand,
  csites,
  strands,
  brief,
  psp_file,
  priors_file,
  reason_for_stopping,
  background_frequencies
)>
<!ELEMENT command_line (#PCDATA)*>
<!ELEMENT host (#PCDATA)*>
<!ELEMENT type (#PCDATA)*>
<!ELEMENT nmotifs (#PCDATA)*>
<!ELEMENT evalue_threshold (#PCDATA)*>
<!ELEMENT object_function (#PCDATA)*>
<!ELEMENT spfun (#PCDATA)*>
<!ELEMENT min_width (#PCDATA)*>
<!ELEMENT max_width (#PCDATA)*>
<!ELEMENT wg (#PCDATA)*>
<!ELEMENT ws (#PCDATA)*>
<!ELEMENT endgaps (#PCDATA)*>
<!ELEMENT minsites (#PCDATA)*>
<!ELEMENT maxsites (#PCDATA)*>
<!ELEMENT wnsites (#PCDATA)*>
<!ELEMENT spmap (#PCDATA)*>
<!ELEMENT spfuzz (#PCDATA)*>
<!ELEMENT prior (#PCDATA)*>
<!ELEMENT beta (#PCDATA)*>
<!ELEMENT maxiter (#PCDATA)*>
<!ELEMENT distance (#PCDATA)*>
<!ELEMENT num_positions (#PCDATA)*>
<!ELEMENT seed (#PCDATA)*>
<!ELEMENT hsfrac (#PCDATA)*>
<!ELEMENT searchsize (#PCDATA)*>
<!ELEMENT maxsize (#PCDATA)*>
<!ELEMENT norand (#PCDATA)*>
<!ELEMENT csites (#PCDATA)*>
<!ELEMENT strands (#PCDATA)*>
<!ELEMENT brief (#PCDATA)*>
<!ELEMENT psp_file (#PCDATA)*>
<!ELEMENT priors_file (#PCDATA)*>
<!ELEMENT reason_for_stopping (#PCDATA)*>
<!ELEMENT background_frequencies (alphabet_array)>
<!ATTLIST background_frequencies source CDATA #REQUIRED
		   order CDATA #REQUIRED>

<!-- Motif elements -->
<!ELEMENT motifs (motif*)>
<!ELEMENT motif (scores, probabilities, regular_expression?, contributing_sites)>
<!ATTLIST motif id ID #REQUIRED
                name CDATA #REQUIRED
                alt CDATA ""
                width CDATA #REQUIRED
                sites CDATA #REQUIRED
                ic CDATA #REQUIRED
                re CDATA #REQUIRED
                llr CDATA #REQUIRED
                p_value CDATA #REQUIRED
                e_value CDATA #REQUIRED
                bayes_threshold CDATA #REQUIRED
                elapsed_time CDATA #REQUIRED
                url CDATA ""
>
<!ELEMENT scores (alphabet_matrix)>
<!ELEMENT probabilities (alphabet_matrix)>
<!ELEMENT regular_expression (#PCDATA)*>

<!-- Contributing site elements -->
<!-- Contributing sites are motif occurences found during the motif discovery phase -->
<!ELEMENT contributing_sites (contributing_site*)>
<!ELEMENT contributing_site (left_flank, site, right_flank)>
<!ATTLIST contributing_site sequence_id IDREF #REQUIRED
                          position CDATA #REQUIRED
                          strand (plus|minus|none) 'none'
                          pvalue CDATA #REQUIRED
>
<!-- The left_flank contains the sequence for 10 bases to the left of the motif start -->
<!ELEMENT left_flank (#PCDATA)>
<!-- The site contains the sequence for the motif instance -->
<!ELEMENT site (letter_ref*)>
<!-- The right_flank contains the sequence for 10 bases to the right of the motif end -->
<!ELEMENT right_flank (#PCDATA)>

<!-- Scanned site elements -->
<!-- Scanned sites are motif occurences found during the sequence scan phase -->
<!ELEMENT scanned_sites_summary (scanned_sites*)>
<!ATTLIST scanned_sites_summary p_thresh CDATA #REQUIRED>
<!ELEMENT scanned_sites (scanned_site*)>
<!ATTLIST scanned_sites sequence_id IDREF #REQUIRED
                        pvalue CDATA #REQUIRED
                        num_sites CDATA #REQUIRED>
<!ELEMENT scanned_site EMPTY>
<!ATTLIST scanned_site  motif_id IDREF #REQUIRED
                        strand (plus|minus|none) 'none'
                        position CDATA #REQUIRED
                        pvalue CDATA #REQUIRED>

<!-- Utility elements -->
<!-- A reference to a letter in the alphabet -->
<!ELEMENT letter_ref EMPTY>
<!ATTLIST letter_ref letter_id IDREF #REQUIRED>
<!-- A alphabet-array contains one floating point value for each letter in an alphabet -->
<!ELEMENT alphabet_array (value*)>
<!ELEMENT value (#PCDATA)>
<!ATTLIST value letter_id IDREF #REQUIRED>

<!-- A alphabet_matrix contains one alphabet_array for each position in a motif -->
<!ELEMENT alphabet_matrix (alphabet_array*)>

]>
<!-- Begin document body -->
<MEME version="5.4.1" release="Sat Aug 21 19:23:23 2021 -0700">
<training_set primary_sequences="/scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_4_peaks/seqs-centered" primary_count="10218" primary_positions="1021800" control_sequences="--none--" control_count="0" control_positions="0">
<alphabet name="DNA" like="dna">
<letter id="A" symbol="A" complement="T" name="Adenine" colour="CC0000"/>
<letter id="C" symbol="C" complement="G" name="Cytosine" colour="0000CC"/>
<letter id="G" symbol="G" complement="C" name="Guanine" colour="FFB300"/>
<letter id="T" symbol="T" aliases="U" complement="A" name="Thymine" colour="008000"/>
<letter id="N" symbol="N" aliases="X." equals="ACGT" name="Any base"/>
<letter id="V" symbol="V" equals="ACG" name="Not T"/>
<letter id="H" symbol="H" equals="ACT" name="Not G"/>
<letter id="D" symbol="D" equals="AGT" name="Not C"/>
<letter id="B" symbol="B" equals="CGT" name="Not A"/>
<letter id="M" symbol="M" equals="AC" name="Amino"/>
<letter id="R" symbol="R" equals="AG" name="Purine"/>
<letter id="W" symbol="W" equals="AT" name="Weak"/>
<letter id="S" symbol="S" equals="CG" name="Strong"/>
<letter id="Y" symbol="Y" equals="CT" name="Pyrimidine"/>
<letter id="K" symbol="K" equals="GT" name="Keto"/>
</alphabet>
<letter_frequencies>
<alphabet_array>
<value letter_id="A">0.189</value>
<value letter_id="C">0.311</value>
<value letter_id="G">0.311</value>
<value letter_id="T">0.189</value>
</alphabet_array>
</letter_frequencies>
</training_set>
<model>
<command_line>meme /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_4_peaks/seqs-centered -oc /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_4_peaks/meme_out -mod zoops -nmotifs 10 -minw 6 -maxw 15 -bfile /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_4_peaks/background -dna -revcomp -nostatus </command_line>
<host>fv-az119-924</host>
<type>zoops</type>
<nmotifs>10</nmotifs>
<evalue_threshold>inf</evalue_threshold>
<object_function>E-value of product of p-values</object_function>
<spfun>E-value of product of p-values</spfun>
<min_width>6</min_width>
<max_width>15</max_width>
<wg>11</wg>
<ws>1</ws>
<endgaps>yes</endgaps>
<substring>yes</substring>
<minsites>2</minsites>
<maxsites>10218</maxsites>
<wnsites>0.8</wnsites>
<spmap>uni</spmap>
<spfuzz>0.5</spfuzz>
<prior>dirichlet</prior>
<beta>0.01</beta>
<maxiter>50</maxiter>
<distance>1e-05</distance>
<num_positions>1021800</num_positions>
<seed>0</seed>
<hsfrac>0</hsfrac>
<searchsize>100000</searchsize>
<maxsize>0</maxsize>
<norand>no</norand>
<csites>1000</csites>
<strands>both</strands>
<brief>1000</brief>
<psp_file></psp_file>
<priors_file></priors_file>
<reason_for_stopping>Stopped because requested number of motifs (10) found.</reason_for_stopping>
<background_frequencies source="/scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_4_peaks/background" order="2">
<alphabet_array>
<value letter_id="A">0.188</value>
<value letter_id="C">0.312</value>
<value letter_id="G">0.312</value>
<value letter_id="T">0.188</value>
</alphabet_array>
</background_frequencies>
</model>
<motifs>
<motif id="motif_1" name="TTTTKTWTTTTTWKT" alt="MEME-1" width="15" sites="1241" ic="13.6" re="18.2" llr="15651" p_value="3.7e-577" e_value="2.2e-163" bayes_threshold="11.7168" elapsed_time="301.027718">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-30</value>
<value letter_id="C">-701</value>
<value letter_id="G">-276</value>
<value letter_id="T">208</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">6</value>
<value letter_id="C">-759</value>
<value letter_id="G">-659</value>
<value letter_id="T">209</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-57</value>
<value letter_id="C">-701</value>
<value letter_id="G">-627</value>
<value letter_id="T">220</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-136</value>
<value letter_id="C">-210</value>
<value letter_id="G">-146</value>
<value letter_id="T">198</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-51</value>
<value letter_id="C">-759</value>
<value letter_id="G">32</value>
<value letter_id="T">134</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-787</value>
<value letter_id="C">-119</value>
<value letter_id="G">-379</value>
<value letter_id="T">216</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">117</value>
<value letter_id="C">-166</value>
<value letter_id="G">-759</value>
<value letter_id="T">134</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-97</value>
<value letter_id="C">-627</value>
<value letter_id="G">-142</value>
<value letter_id="T">206</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1692</value>
<value letter_id="C">-154</value>
<value letter_id="G">-171</value>
<value letter_id="T">208</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-34</value>
<value letter_id="C">-659</value>
<value letter_id="G">-168</value>
<value letter_id="T">199</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-95</value>
<value letter_id="C">-169</value>
<value letter_id="G">-859</value>
<value letter_id="T">210</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0</value>
<value letter_id="C">-194</value>
<value letter_id="G">-627</value>
<value letter_id="T">195</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">104</value>
<value letter_id="C">-253</value>
<value letter_id="G">-138</value>
<value letter_id="T">122</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-5</value>
<value letter_id="C">-859</value>
<value letter_id="G">29</value>
<value letter_id="T">121</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">28</value>
<value letter_id="C">-701</value>
<value letter_id="G">-204</value>
<value letter_id="T">188</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.153102</value>
<value letter_id="C">0.002417</value>
<value letter_id="G">0.045931</value>
<value letter_id="T">0.798550</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.195810</value>
<value letter_id="C">0.001612</value>
<value letter_id="G">0.003223</value>
<value letter_id="T">0.799355</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.126511</value>
<value letter_id="C">0.002417</value>
<value letter_id="G">0.004029</value>
<value letter_id="T">0.867043</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.073328</value>
<value letter_id="C">0.072522</value>
<value letter_id="G">0.113618</value>
<value letter_id="T">0.740532</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.132151</value>
<value letter_id="C">0.001612</value>
<value letter_id="G">0.389202</value>
<value letter_id="T">0.477035</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000806</value>
<value letter_id="C">0.136180</value>
<value letter_id="G">0.022562</value>
<value letter_id="T">0.840451</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.424658</value>
<value letter_id="C">0.098308</value>
<value letter_id="G">0.001612</value>
<value letter_id="T">0.475423</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.095890</value>
<value letter_id="C">0.004029</value>
<value letter_id="G">0.116841</value>
<value letter_id="T">0.783239</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.107172</value>
<value letter_id="G">0.095085</value>
<value letter_id="T">0.797744</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.149073</value>
<value letter_id="C">0.003223</value>
<value letter_id="G">0.097502</value>
<value letter_id="T">0.750201</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.097502</value>
<value letter_id="C">0.096696</value>
<value letter_id="G">0.000806</value>
<value letter_id="T">0.804996</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.188558</value>
<value letter_id="C">0.081386</value>
<value letter_id="G">0.004029</value>
<value letter_id="T">0.726027</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.388396</value>
<value letter_id="C">0.053989</value>
<value letter_id="G">0.120064</value>
<value letter_id="T">0.437550</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.181305</value>
<value letter_id="C">0.000806</value>
<value letter_id="G">0.381950</value>
<value letter_id="T">0.435939</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.228042</value>
<value letter_id="C">0.002417</value>
<value letter_id="G">0.075745</value>
<value letter_id="T">0.693795</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
TTTT[TG]T[TA]TTTTT[TA][TG][TA]
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_2" name="TAATCCCAGCWMYTT" alt="MEME-2" width="15" sites="538" ic="21.3" re="22.8" llr="8519" p_value="8.4e-373" e_value="5.9e-138" bayes_threshold="12.8332" elapsed_time="541.191117">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-1572</value>
<value letter_id="C">-539</value>
<value letter_id="G">-1572</value>
<value letter_id="T">240</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">234</value>
<value letter_id="C">-480</value>
<value letter_id="G">-322</value>
<value letter_id="T">-566</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">207</value>
<value letter_id="C">-1572</value>
<value letter_id="G">-57</value>
<value letter_id="T">-666</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1572</value>
<value letter_id="C">-393</value>
<value letter_id="G">-1572</value>
<value letter_id="T">238</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-508</value>
<value letter_id="C">156</value>
<value letter_id="G">-739</value>
<value letter_id="T">-141</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-466</value>
<value letter_id="C">158</value>
<value letter_id="G">-539</value>
<value letter_id="T">-176</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1572</value>
<value letter_id="C">158</value>
<value letter_id="G">-739</value>
<value letter_id="T">-153</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">236</value>
<value letter_id="C">-1572</value>
<value letter_id="G">-439</value>
<value letter_id="T">-334</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-162</value>
<value letter_id="C">-507</value>
<value letter_id="G">156</value>
<value letter_id="T">-408</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-349</value>
<value letter_id="C">159</value>
<value letter_id="G">-507</value>
<value letter_id="T">-234</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">147</value>
<value letter_id="C">-739</value>
<value letter_id="G">-480</value>
<value letter_id="T">130</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">125</value>
<value letter_id="C">69</value>
<value letter_id="G">-407</value>
<value letter_id="T">-257</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-466</value>
<value letter_id="C">47</value>
<value letter_id="G">-639</value>
<value letter_id="T">156</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-385</value>
<value letter_id="C">-330</value>
<value letter_id="G">-580</value>
<value letter_id="T">233</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-334</value>
<value letter_id="C">-4</value>
<value letter_id="G">-330</value>
<value letter_id="T">178</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.007435</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.992565</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.951673</value>
<value letter_id="C">0.011152</value>
<value letter_id="G">0.033457</value>
<value letter_id="T">0.003717</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.788104</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.210037</value>
<value letter_id="T">0.001859</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.020446</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.979554</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.005576</value>
<value letter_id="C">0.921933</value>
<value letter_id="G">0.001859</value>
<value letter_id="T">0.070632</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.007435</value>
<value letter_id="C">0.929368</value>
<value letter_id="G">0.007435</value>
<value letter_id="T">0.055762</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.933086</value>
<value letter_id="G">0.001859</value>
<value letter_id="T">0.065056</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.966543</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.014870</value>
<value letter_id="T">0.018587</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.061338</value>
<value letter_id="C">0.009294</value>
<value letter_id="G">0.918216</value>
<value letter_id="T">0.011152</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.016729</value>
<value letter_id="C">0.936803</value>
<value letter_id="G">0.009294</value>
<value letter_id="T">0.037175</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.522305</value>
<value letter_id="C">0.001859</value>
<value letter_id="G">0.011152</value>
<value letter_id="T">0.464684</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.447955</value>
<value letter_id="C">0.501859</value>
<value letter_id="G">0.018587</value>
<value letter_id="T">0.031599</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.007435</value>
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TA[AG]TCCCAGC[AT][CA][TC]T[TC]
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<contributing_sites>
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<regular_expression>
GG[AC]GGC[GTC]G[AC]GG[CT][GA]G[GC]
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
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<regular_expression>
CCAGGCTGG[TA][CG]T[CG][GC]A
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<contributing_sites>
</contributing_sites>
</motif>
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[GA][GC][CT]TCA[AG]G[TC]GAT[CT]CT
</regular_expression>
<contributing_sites>
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</motif>
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<regular_expression>
AGG[CT][GA]TGAGCCAC[CT][AG]
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_7" name="GGGTYTCRCYMTGTT" alt="MEME-7" width="15" sites="481" ic="19.0" re="19.9" llr="6621" p_value="2.7e-190" e_value="2.5e-047" bayes_threshold="13.1098" elapsed_time="1689.373441">
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<regular_expression>
G[GA]GT[TC]T[CT][AG]C[CT][AC]TGT[TC]
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_8" name="AGTGAGCYGAGATYG" alt="MEME-8" width="15" sites="187" ic="22.1" re="22.7" llr="2946" p_value="1.7e-144" e_value="4.0e-035" bayes_threshold="14.2922" elapsed_time="1914.693690">
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<regular_expression>
AGTGAGC[CT][GA]AGAT[CT][GA]
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
<motif id="motif_9" name="CCCCGCCCCCGSCCC" alt="MEME-9" width="15" sites="1244" ic="16.6" re="12.6" llr="10882" p_value="1.9e-604" e_value="9.7e-034" bayes_threshold="11.5158" elapsed_time="2139.576407">
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<regular_expression>
CC[CG]CGCCCC[CG][GC][CG]C[CG][CG]
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
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A[ATC][AT][TA][TAC][TC]T[TG]A[AT][TAG][TA][CT][TAC][TA]
</regular_expression>
<contributing_sites>
</contributing_sites>
</motif>
</motifs>
</MEME>
