******************************************************************************** STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation ******************************************************************************** MEME version 5.4.1 (Release date: Sat Aug 21 19:23:23 2021 -0700) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey, "STREME: accurate and versatile sequence motif discovery", Bioinformatics, Mar. 24, 2021. ******************************************************************************** ALPHABET= ACGT strands: + - Background letter frequencies A 0.191 C 0.309 G 0.309 T 0.191 MOTIF 1-CCTGTAATCCCAGCW STREME-1 letter-probability matrix: alength= 4 w= 15 nsites= 778 E= 1.4e-025 0.006962 0.933393 0.018063 0.041582 0.009731 0.929238 0.013909 0.047121 0.008346 0.006985 0.005601 0.979068 0.077594 0.013909 0.895996 0.012501 0.013885 0.019449 0.013909 0.952756 0.956910 0.008370 0.027758 0.006962 0.768404 0.015294 0.205186 0.011116 0.004192 0.023603 0.009755 0.962450 0.008346 0.940318 0.012524 0.038812 0.009731 0.923699 0.009755 0.056815 0.018040 0.907073 0.005601 0.069287 0.963836 0.011140 0.016678 0.008347 0.066509 0.018063 0.904312 0.011116 0.013885 0.934779 0.015294 0.036042 0.510436 0.026373 0.013909 0.449282 MOTIF 2-GCCTCRGCCTCCCRA STREME-2 letter-probability matrix: alength= 4 w= 15 nsites= 844 E= 1.9e-019 0.243709 0.013269 0.725811 0.017210 0.007963 0.906067 0.002701 0.083270 0.001357 0.958916 0.007985 0.031741 0.000036 0.000059 0.000059 0.999846 0.000036 0.839950 0.000059 0.159955 0.564481 0.026483 0.346352 0.062684 0.052885 0.006664 0.929847 0.010605 0.003999 0.912673 0.007985 0.075342 0.002678 0.939100 0.010627 0.047595 0.007962 0.005343 0.001380 0.985315 0.005320 0.958916 0.005343 0.030420 0.006642 0.943063 0.005343 0.044952 0.021173 0.785782 0.009306 0.183739 0.613403 0.034407 0.329696 0.022494 0.858481 0.013269 0.126893 0.001357 MOTIF 3-CCAGCCTGGSCAACA STREME-3 letter-probability matrix: alength= 4 w= 15 nsites= 647 E= 1.2e-015 0.012155 0.942751 0.019102 0.025992 0.003507 0.956585 0.003536 0.036372 0.998069 0.000077 0.000077 0.001777 0.036370 0.001807 0.892585 0.069238 0.005237 0.963506 0.008725 0.022532 0.012155 0.956588 0.000077 0.031180 0.015614 0.006996 0.001807 0.975584 0.028439 0.000077 0.971436 0.000048 0.100395 0.012184 0.878725 0.008696 0.036370 0.445095 0.496003 0.022532 0.008696 0.833728 0.001807 0.155770 0.784501 0.008725 0.204996 0.001777 0.982502 0.000077 0.015644 0.001777 0.020804 0.918533 0.006996 0.053667 0.965206 0.003536 0.029480 0.001777 MOTIF 4-RATCRCTTGA STREME-4 letter-probability matrix: alength= 4 w= 10 nsites= 555 E= 1.4e-012 0.381735 0.000101 0.610904 0.007260 0.983278 0.000101 0.016559 0.000062 0.000062 0.000101 0.000101 0.999737 0.021223 0.846322 0.004610 0.127845 0.619299 0.000101 0.342884 0.037717 0.000062 0.971573 0.000101 0.028265 0.008980 0.252581 0.012310 0.726129 0.000062 0.000101 0.000101 0.999737 0.000062 0.000101 0.999775 0.000062 0.999737 0.000101 0.000101 0.000062 MOTIF 5-TAGAGACRGGGTTT STREME-5 letter-probability matrix: alength= 4 w= 14 nsites= 653 E= 2.7e-012 0.008284 0.013255 0.000073 0.978388 0.676085 0.000073 0.047859 0.275983 0.029704 0.016550 0.943814 0.009931 0.975092 0.008312 0.013255 0.003341 0.036294 0.008312 0.950406 0.004988 0.959580 0.000073 0.022177 0.018170 0.013227 0.666819 0.001721 0.318233 0.402933 0.009960 0.572233 0.014875 0.112098 0.008312 0.877897 0.001693 0.263751 0.013255 0.703177 0.019818 0.039591 0.013255 0.919098 0.028056 0.000045 0.005016 0.014902 0.980036 0.001693 0.318851 0.008312 0.671144 0.000045 0.018198 0.000073 0.981683 MOTIF 6-CTYGAACTCCTGACC STREME-6 letter-probability matrix: alength= 4 w= 15 nsites= 375 E= 3.2e-009 0.008643 0.959747 0.002982 0.028628 0.000079 0.002982 0.005837 0.991102 0.011499 0.591320 0.031532 0.365649 0.219972 0.025822 0.736998 0.017208 0.996812 0.000127 0.002982 0.000079 0.931146 0.005837 0.020112 0.042905 0.000079 0.968311 0.002982 0.028628 0.017208 0.037243 0.008692 0.936857 0.002934 0.948326 0.017257 0.031484 0.008643 0.945472 0.005837 0.040048 0.002934 0.034388 0.005837 0.956842 0.048613 0.011547 0.925487 0.014353 0.731286 0.008692 0.248524 0.011498 0.031483 0.728483 0.199985 0.040048 0.014353 0.914067 0.005837 0.065743 MOTIF 7-AAAATTAGCCRGGC STREME-7 letter-probability matrix: alength= 4 w= 14 nsites= 444 E= 6.8e-009 0.973681 0.006630 0.006630 0.013059 0.986651 0.006630 0.000145 0.006574 0.967196 0.009872 0.003387 0.019545 0.957468 0.009872 0.019600 0.013059 0.009817 0.016358 0.003387 0.970438 0.000089 0.026085 0.013115 0.960711 0.980166 0.006630 0.013115 0.000089 0.019545 0.009872 0.957523 0.013060 0.000089 0.973735 0.000145 0.026031 0.003332 0.765908 0.009872 0.220888 0.480254 0.006630 0.470872 0.042244 0.039000 0.000145 0.957523 0.003332 0.029274 0.009872 0.960764 0.000089 0.016302 0.801803 0.016357 0.165538 MOTIF 8-ATCTYGGCTCACTGC STREME-8 letter-probability matrix: alength= 4 w= 15 nsites= 293 E= 1.5e-008 0.949603 0.004013 0.046278 0.000106 0.019317 0.027067 0.000171 0.953445 0.011632 0.949668 0.004013 0.034686 0.188379 0.000171 0.000171 0.811279 0.003948 0.646039 0.000171 0.349842 0.307611 0.023224 0.665217 0.003948 0.023159 0.007856 0.965038 0.003948 0.007790 0.949668 0.004013 0.038529 0.000106 0.011698 0.000171 0.988025 0.000106 0.938142 0.000171 0.061581 0.945761 0.023224 0.030909 0.000106 0.000106 0.945827 0.023224 0.030843 0.007790 0.061646 0.007856 0.922708 0.034685 0.000171 0.949669 0.015474 0.027001 0.918931 0.011698 0.042370 MOTIF 9-CTAAAAATACA STREME-9 letter-probability matrix: alength= 4 w= 11 nsites= 340 E= 3.1e-008 0.006770 0.967028 0.001818 0.024383 0.055355 0.005027 0.003488 0.936130 0.961067 0.003488 0.033548 0.001897 0.989593 0.003488 0.006827 0.000092 0.996271 0.000149 0.003488 0.000092 0.978931 0.000149 0.010811 0.010110 0.976235 0.013506 0.010167 0.000092 0.000092 0.040231 0.013506 0.946171 0.979574 0.003488 0.013506 0.003431 0.007997 0.948347 0.016846 0.026810 0.967289 0.005752 0.026867 0.000092 MOTIF 10-CRTGAGCCACCRC STREME-10 letter-probability matrix: alength= 4 w= 13 nsites= 438 E= 6.7e-008 0.022318 0.760331 0.000110 0.217241 0.357167 0.012472 0.608043 0.022319 0.000068 0.054503 0.000110 0.945318 0.039624 0.018442 0.941865 0.000068 0.736590 0.072838 0.005055 0.185517 0.000068 0.012472 0.982448 0.005013 0.000068 0.984920 0.005055 0.009957 0.005013 0.970087 0.000110 0.024791 0.997239 0.000110 0.002582 0.000068 0.000068 0.988838 0.000110 0.010983 0.009957 0.726728 0.022360 0.240954 0.469455 0.000110 0.513060 0.017374 0.012429 0.673374 0.005055 0.309141 MOTIF 11-AGTGCAGTGGCRCG STREME-11 letter-probability matrix: alength= 4 w= 14 nsites= 264 E= 3.8e-006 0.943118 0.016297 0.032415 0.008170 0.052494 0.012268 0.935128 0.000111 0.000111 0.032415 0.012268 0.955206 0.056523 0.000180 0.943187 0.000111 0.008170 0.947216 0.008238 0.036376 0.955206 0.000180 0.044503 0.000111 0.137116 0.004209 0.858563 0.000111 0.000111 0.000180 0.004209 0.995500 0.028317 0.000180 0.959304 0.012199 0.000111 0.000180 0.987510 0.012199 0.040406 0.705429 0.000180 0.253986 0.451476 0.028386 0.479733 0.040405 0.024287 0.640940 0.032417 0.302356 0.282209 0.072709 0.620794 0.024287 MOTIF 12-CCCCRSCCCCGCC STREME-12 letter-probability matrix: alength= 4 w= 13 nsites= 1987 E= 6.3e-006 0.014325 0.933120 0.047927 0.004628 0.017997 0.939906 0.042074 0.000023 0.000023 0.969077 0.030877 0.000023 0.022642 0.727948 0.244025 0.005386 0.506364 0.059395 0.311843 0.122398 0.116190 0.314370 0.428734 0.140706 0.001856 0.975423 0.007908 0.014812 0.026927 0.926559 0.030770 0.015743 0.006711 0.922302 0.028197 0.042791 0.064191 0.707868 0.144349 0.083592 0.215175 0.000037 0.736410 0.048378 0.135937 0.625700 0.136139 0.102223 0.053122 0.722617 0.193762 0.030499 MOTIF 13-CGCCCRCCACCAY STREME-13 letter-probability matrix: alength= 4 w= 13 nsites= 181 E= 5.4e-005 0.000181 0.733582 0.000293 0.265944 0.320278 0.000293 0.679248 0.000181 0.000181 0.740162 0.059474 0.200183 0.000181 0.727009 0.272628 0.000181 0.000181 0.742886 0.020020 0.236913 0.450067 0.013445 0.536307 0.000181 0.000181 0.959891 0.013444 0.026484 0.000181 0.976889 0.000293 0.022637 0.999232 0.000293 0.000293 0.000181 0.000181 0.851953 0.020020 0.127846 0.000181 0.946739 0.000293 0.052787 0.999232 0.000293 0.000293 0.000181 0.000181 0.648096 0.000293 0.351430 MOTIF 14-AACCTCCRCCTCC STREME-14 letter-probability matrix: alength= 4 w= 13 nsites= 132 E= 2.3e-003 0.972379 0.000395 0.026982 0.000244 0.991610 0.004073 0.004073 0.000244 0.000244 0.906804 0.092708 0.000244 0.026831 0.866181 0.026982 0.080005 0.000244 0.000395 0.000395 0.998966 0.000244 0.910494 0.026982 0.062280 0.000244 0.839581 0.035844 0.124331 0.617839 0.009257 0.346073 0.026831 0.026831 0.906816 0.004073 0.062280 0.000244 0.945943 0.018120 0.035693 0.000244 0.000395 0.000395 0.998966 0.009106 0.928217 0.009257 0.053419 0.017969 0.945943 0.009257 0.026831 MOTIF 15-AAAAAAAAAAAYAA STREME-15 letter-probability matrix: alength= 4 w= 14 nsites= 284 E= 3.5e-003 0.993931 0.000242 0.000242 0.005585 0.921015 0.056854 0.000242 0.021889 0.797320 0.107636 0.027416 0.067628 0.707600 0.149729 0.000242 0.142428 0.953632 0.005677 0.016547 0.024145 0.797337 0.125413 0.000242 0.077007 0.809137 0.098078 0.005677 0.087108 0.733026 0.141577 0.000242 0.125155 0.882807 0.033018 0.000242 0.083933 0.983061 0.000242 0.000242 0.016454 0.999366 0.000242 0.000242 0.000150 0.081197 0.342382 0.179453 0.396969 0.892409 0.000242 0.000242 0.107106 0.999366 0.000242 0.000242 0.000150 MOTIF 16-WCCCGGGW STREME-16 letter-probability matrix: alength= 4 w= 8 nsites= 969 E= 1.4e-001 0.375927 0.027733 0.120640 0.475701 0.020159 0.873405 0.055452 0.050984 0.011700 0.917008 0.006586 0.064706 0.001385 0.952137 0.021769 0.024710 0.024710 0.021769 0.952137 0.001385 0.064706 0.006586 0.917008 0.011700 0.050984 0.055452 0.873405 0.020159 0.475701 0.120640 0.027733 0.375927 MOTIF 17-AGGAGAATBGCTTGA STREME-17 letter-probability matrix: alength= 4 w= 15 nsites= 94 E= 1.5e-001 0.849682 0.000443 0.149600 0.000274 0.000274 0.044345 0.935220 0.020161 0.020161 0.000443 0.969178 0.010218 0.978952 0.020331 0.000443 0.000274 0.030105 0.000443 0.969178 0.000274 0.809907 0.000443 0.189376 0.000274 0.909346 0.030275 0.060106 0.000274 0.000274 0.169491 0.000443 0.829792 0.000274 0.358425 0.392431 0.248870 0.213221 0.119772 0.636902 0.030105 0.020161 0.865613 0.020331 0.093895 0.064064 0.000443 0.249088 0.686405 0.000274 0.000443 0.020331 0.978951 0.143616 0.030275 0.825836 0.000274 0.909346 0.000443 0.070049 0.020161 MOTIF 18-AAGAAAAGAAAAAA STREME-18 letter-probability matrix: alength= 4 w= 14 nsites= 115 E= 2.3e-001 0.965311 0.000341 0.026483 0.007866 0.907249 0.000341 0.000341 0.092068 0.010927 0.069234 0.873699 0.046139 0.937868 0.038615 0.023306 0.000211 0.884285 0.015651 0.084544 0.015520 0.922559 0.030960 0.007996 0.038485 0.846010 0.007996 0.145783 0.000211 0.078764 0.145782 0.576219 0.199235 0.773941 0.030960 0.156614 0.038485 0.899595 0.007996 0.061579 0.030830 0.846011 0.061579 0.084544 0.007866 0.937868 0.000341 0.053925 0.007866 0.521329 0.118340 0.245298 0.115032 0.573624 0.023306 0.185349 0.217721 MOTIF 19-ACTTCCGG STREME-19 letter-probability matrix: alength= 4 w= 8 nsites= 96 E= 2.5e-001 0.926445 0.028100 0.028100 0.017355 0.017355 0.937191 0.028100 0.017355 0.017355 0.028100 0.028100 0.926445 0.017355 0.028100 0.028100 0.926445 0.017355 0.937191 0.028100 0.017355 0.017355 0.937191 0.028100 0.017355 0.017355 0.028100 0.937191 0.017355 0.017355 0.028100 0.937191 0.017355 MOTIF 20-GCCGCCGCCGCCGC STREME-20 letter-probability matrix: alength= 4 w= 14 nsites= 652 E= 2.9e-001 0.017935 0.045007 0.937003 0.000055 0.020415 0.864163 0.021027 0.094395 0.068086 0.865202 0.002428 0.064283 0.081122 0.065670 0.804239 0.048969 0.009986 0.967027 0.000089 0.022898 0.038042 0.792520 0.092226 0.077212 0.034192 0.000089 0.916481 0.049238 0.004852 0.903895 0.000089 0.091165 0.034925 0.913482 0.048718 0.002875 0.069579 0.068132 0.745966 0.116323 0.021567 0.956609 0.000089 0.021736 0.008825 0.935786 0.004912 0.050477 0.033940 0.019044 0.844681 0.102334 0.022803 0.935266 0.000089 0.041843 MOTIF 21-GGAAACTGAGGCH STREME-21 letter-probability matrix: alength= 4 w= 13 nsites= 189 E= 3.6e-001 0.162517 0.000482 0.836703 0.000298 0.043556 0.022111 0.934035 0.000298 0.896918 0.026600 0.054555 0.021927 0.864475 0.134745 0.000482 0.000298 0.832031 0.054555 0.113116 0.000298 0.004786 0.994434 0.000482 0.000298 0.021927 0.123930 0.000482 0.853661 0.000298 0.022111 0.955664 0.021927 0.977109 0.011297 0.011297 0.000298 0.188633 0.000482 0.810587 0.000298 0.048044 0.004970 0.870985 0.076000 0.011112 0.778142 0.048229 0.162516 0.285976 0.423084 0.011297 0.279642 MOTIF 22-GTAGCTGGGA STREME-22 letter-probability matrix: alength= 4 w= 10 nsites= 91 E= 4.3e-001 0.000397 0.000642 0.998565 0.000397 0.000397 0.000642 0.000642 0.998319 0.998319 0.000642 0.000642 0.000397 0.000397 0.000642 0.912157 0.086805 0.187611 0.811350 0.000642 0.000397 0.000397 0.000642 0.000642 0.998319 0.179187 0.029444 0.762170 0.029199 0.201392 0.043845 0.754366 0.000397 0.130013 0.173460 0.696131 0.000397 0.998319 0.000642 0.000642 0.000397 MOTIF 23-GCCCCGCCCC STREME-23 letter-probability matrix: alength= 4 w= 10 nsites= 105 E= 7.4e-001 0.017355 0.028100 0.937191 0.017355 0.017355 0.937191 0.028100 0.017355 0.017355 0.937191 0.028100 0.017355 0.017355 0.937191 0.028100 0.017355 0.017355 0.937191 0.028100 0.017355 0.017355 0.028100 0.937191 0.017355 0.017355 0.937191 0.028100 0.017355 0.017355 0.937191 0.028100 0.017355 0.017355 0.937191 0.028100 0.017355 0.017355 0.937191 0.028100 0.017355 MOTIF 24-CGGGGTCT STREME-24 letter-probability matrix: alength= 4 w= 8 nsites= 714 E= 7.6e-001 0.073807 0.627046 0.000418 0.298730 0.043029 0.020585 0.888850 0.047535 0.000258 0.000418 0.999066 0.000258 0.000258 0.145864 0.839624 0.014254 0.029472 0.000418 0.946000 0.024110 0.167066 0.000418 0.000418 0.832098 0.017844 0.981480 0.000418 0.000258 0.065635 0.054324 0.131437 0.748603 MOTIF 25-GACGCCGAG STREME-25 letter-probability matrix: alength= 4 w= 9 nsites= 1232 E= 7.8e-001 0.045814 0.007961 0.938799 0.007426 0.944640 0.000583 0.000583 0.054194 0.094266 0.765293 0.134032 0.006409 0.017557 0.176419 0.756987 0.049037 0.042101 0.914793 0.016600 0.026506 0.029609 0.939793 0.008967 0.021630 0.013433 0.059213 0.904510 0.022844 0.901403 0.045545 0.039620 0.013433 0.000360 0.013656 0.985327 0.000657 MOTIF 26-CAGGAAGC STREME-26 letter-probability matrix: alength= 4 w= 8 nsites= 245 E= 9.2e-001 0.017355 0.937191 0.028100 0.017355 0.926445 0.028100 0.028100 0.017355 0.017355 0.028100 0.937191 0.017355 0.017355 0.028100 0.937191 0.017355 0.926445 0.028100 0.028100 0.017355 0.926445 0.028100 0.028100 0.017355 0.017355 0.028100 0.937191 0.017355 0.017355 0.937191 0.028100 0.017355 MOTIF 27-AGCCCCAGGK STREME-27 letter-probability matrix: alength= 4 w= 10 nsites= 543 E= 9.4e-001 0.999396 0.000231 0.000231 0.000142 0.077770 0.098780 0.748996 0.074454 0.059542 0.920401 0.000231 0.019827 0.045840 0.933479 0.013890 0.006792 0.015832 0.972605 0.011421 0.000142 0.069780 0.783080 0.139431 0.007708 0.936516 0.000231 0.063111 0.000142 0.082883 0.064722 0.731333 0.121063 0.022885 0.081029 0.797799 0.098287 0.075710 0.178655 0.363464 0.382172 MOTIF 28-CTCGGGGC STREME-28 letter-probability matrix: alength= 4 w= 8 nsites= 223 E= 1.0e+000 0.017355 0.937191 0.028100 0.017355 0.017355 0.028100 0.028100 0.926445 0.017355 0.937191 0.028100 0.017355 0.017355 0.028100 0.937191 0.017355 0.017355 0.028100 0.937191 0.017355 0.017355 0.028100 0.937191 0.017355 0.017355 0.028100 0.937191 0.017355 0.017355 0.937191 0.028100 0.017355 MOTIF 29-GGYGGATCACGA STREME-29 letter-probability matrix: alength= 4 w= 12 nsites= 58 E= 1.2e+000 0.000482 0.000780 0.998256 0.000482 0.000482 0.000780 0.998256 0.000482 0.017977 0.525740 0.000780 0.455502 0.227947 0.000780 0.770791 0.000482 0.017977 0.000780 0.963265 0.017977 0.997958 0.000780 0.000780 0.000482 0.000482 0.000780 0.035771 0.962967 0.000482 0.998256 0.000780 0.000482 0.980462 0.000780 0.018276 0.000482 0.000482 0.893279 0.000780 0.105459 0.140453 0.018276 0.840789 0.000482 0.997958 0.000780 0.000780 0.000482 MOTIF 30-AAGATGGCGG STREME-30 letter-probability matrix: alength= 4 w= 10 nsites= 59 E= 1.2e+000 0.975709 0.000970 0.000970 0.022351 0.997461 0.000970 0.000970 0.000599 0.000599 0.218512 0.780290 0.000599 0.997461 0.000970 0.000970 0.000599 0.000599 0.000970 0.000970 0.997461 0.022351 0.000970 0.976080 0.000599 0.022351 0.000970 0.867316 0.109363 0.000599 0.932575 0.000970 0.065856 0.000599 0.262025 0.736777 0.000599 0.131124 0.000970 0.823802 0.044104 MOTIF 31-CATGCCACCAC STREME-31 letter-probability matrix: alength= 4 w= 11 nsites= 37 E= 1.2e+000 0.000945 0.927966 0.070144 0.000945 0.961689 0.001530 0.035836 0.000945 0.000945 0.001530 0.001530 0.995996 0.069559 0.001530 0.927966 0.000945 0.000945 0.962274 0.001530 0.035251 0.035251 0.927968 0.001530 0.035251 0.995996 0.001530 0.001530 0.000945 0.000945 0.962274 0.001530 0.035251 0.000945 0.927966 0.001530 0.069559 0.995996 0.001530 0.001530 0.000945 0.000945 0.825031 0.001530 0.172494 MOTIF 32-CTTTGGGAGGCY STREME-32 letter-probability matrix: alength= 4 w= 12 nsites= 36 E= 1.2e+000 0.000774 0.997197 0.001254 0.000774 0.000774 0.029371 0.001254 0.968601 0.000774 0.001254 0.029371 0.968601 0.000774 0.001254 0.057490 0.940482 0.000774 0.001254 0.997197 0.000774 0.012444 0.001254 0.985528 0.000774 0.028892 0.029371 0.940963 0.000774 0.968601 0.001254 0.029371 0.000774 0.028892 0.001254 0.969080 0.000774 0.000774 0.001254 0.940961 0.057010 0.000774 0.997197 0.001254 0.000774 0.113253 0.395038 0.057490 0.434220 MOTIF 33-AGGAGGAGGAGGAG STREME-33 letter-probability matrix: alength= 4 w= 14 nsites= 482 E= 1.5e+000 0.987327 0.006975 0.000102 0.005596 0.005790 0.149011 0.835972 0.009227 0.083963 0.115599 0.800375 0.000063 0.848293 0.062009 0.030071 0.059627 0.114415 0.151490 0.720287 0.013809 0.125674 0.045921 0.828342 0.000063 0.898176 0.044386 0.000102 0.057336 0.178171 0.092689 0.729076 0.000063 0.131207 0.059277 0.763635 0.045881 0.577784 0.140605 0.129397 0.152214 0.140449 0.240648 0.588107 0.030796 0.037864 0.005066 0.957008 0.000063 0.720111 0.152254 0.065717 0.061918 0.140838 0.069780 0.737968 0.051414 MOTIF 34-CAACATGGYG STREME-34 letter-probability matrix: alength= 4 w= 10 nsites= 303 E= 1.5e+000 0.000123 0.815235 0.007362 0.177280 0.961125 0.000199 0.035846 0.002830 0.961423 0.000199 0.000199 0.038180 0.000123 0.687520 0.251498 0.060860 0.927211 0.000199 0.059100 0.013491 0.000123 0.088476 0.000199 0.911203 0.058464 0.063242 0.878171 0.000123 0.090894 0.065095 0.805219 0.038792 0.016533 0.342448 0.014426 0.626593 0.107285 0.049937 0.711158 0.131620 MOTIF 35-AATAAATGA STREME-35 letter-probability matrix: alength= 4 w= 9 nsites= 116 E= 1.8e+000 0.882049 0.009587 0.066279 0.042084 0.926331 0.005638 0.019956 0.048075 0.000451 0.017115 0.000731 0.981703 0.640953 0.046459 0.144711 0.167877 0.982680 0.005638 0.006803 0.004880 0.952527 0.017115 0.019950 0.010407 0.000451 0.017115 0.000731 0.981703 0.091945 0.002256 0.900892 0.004908 0.962029 0.036790 0.000731 0.000451 MOTIF 36-ACGTSACC STREME-36 letter-probability matrix: alength= 4 w= 8 nsites= 133 E= 1.8e+000 0.997580 0.000924 0.000924 0.000571 0.000571 0.997934 0.000924 0.000571 0.000571 0.000924 0.997934 0.000571 0.000571 0.000924 0.000924 0.997580 0.000571 0.413093 0.585765 0.000571 0.997580 0.000924 0.000924 0.000571 0.000571 0.778457 0.000924 0.220048 0.000571 0.536361 0.264207 0.198860 MOTIF 37-CCCGGGGGTCCCG STREME-37 letter-probability matrix: alength= 4 w= 13 nsites= 61 E= 4.9e+000 0.075368 0.859376 0.064741 0.000515 0.101848 0.765812 0.094399 0.037941 0.019228 0.979422 0.000834 0.000515 0.037942 0.000834 0.960708 0.000515 0.000515 0.186528 0.718875 0.094081 0.000515 0.056974 0.885856 0.056654 0.094081 0.027314 0.878090 0.000515 0.037942 0.010950 0.950593 0.000515 0.019228 0.000834 0.000834 0.979103 0.000515 0.979422 0.019547 0.000515 0.000515 0.747098 0.046027 0.206360 0.037941 0.896803 0.064741 0.000515 0.037941 0.000834 0.878091 0.083134 MOTIF 38-CCTGTARTCCCA STREME-38 letter-probability matrix: alength= 4 w= 12 nsites= 56 E= 2.0e+001 0.000493 0.908658 0.090355 0.000493 0.054227 0.872836 0.054532 0.018405 0.000493 0.054532 0.018710 0.926264 0.000493 0.018710 0.980303 0.000493 0.000493 0.000799 0.000799 0.997909 0.949940 0.000799 0.048768 0.000493 0.424704 0.000799 0.574004 0.000493 0.000493 0.036621 0.000799 0.962087 0.036316 0.908658 0.036621 0.018405 0.036316 0.872836 0.054532 0.036316 0.054227 0.944481 0.000799 0.000493 0.890441 0.018710 0.018710 0.072139 MOTIF 39-CCTGGGCCTGGCC STREME-39 letter-probability matrix: alength= 4 w= 13 nsites= 65 E= 2.0e+001 0.019186 0.942124 0.000833 0.037858 0.019186 0.865700 0.095928 0.019186 0.019186 0.019504 0.019504 0.941807 0.019186 0.056848 0.886109 0.037858 0.037858 0.000833 0.942124 0.019186 0.037858 0.032166 0.892120 0.037857 0.019186 0.960796 0.000833 0.019186 0.037857 0.830096 0.131533 0.000514 0.005560 0.010925 0.056850 0.926665 0.056529 0.069508 0.854777 0.019186 0.000514 0.038176 0.934375 0.026934 0.056529 0.923453 0.019504 0.000514 0.019186 0.926627 0.035002 0.019186 ******************************************************************************** Stopped because 3 consecutive motifs exceeded the p-value threshold (0.05). ******************************************************************************** COMMAND: streme --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d0_TRIM1_1_peaks/streme_out -dna --p /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d0_TRIM1_1_peaks/seqs-centered --minw 6 --maxw 15 --order 2 ******************************************************************************** CPU: cn45 ******************************************************************************** FINALTIME: 1043.05 seconds ********************************************************************************