******************************************************************************** STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation ******************************************************************************** MEME version 5.4.1 (Release date: Sat Aug 21 19:23:23 2021 -0700) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey, "STREME: accurate and versatile sequence motif discovery", Bioinformatics, Mar. 24, 2021. ******************************************************************************** ALPHABET= ACGT strands: + - Background letter frequencies A 0.198 C 0.302 G 0.302 T 0.198 MOTIF 1-CCTCRGCCTCCCAAR STREME-1 letter-probability matrix: alength= 4 w= 15 nsites= 661 E= 1.8e-017 0.013038 0.951114 0.000071 0.035777 0.000046 0.949491 0.006567 0.043896 0.001670 0.000071 0.000071 0.998188 0.003294 0.811323 0.003319 0.182064 0.621091 0.003319 0.362552 0.013039 0.020209 0.004943 0.965058 0.009790 0.003294 0.961382 0.001695 0.033629 0.009790 0.957612 0.001695 0.030903 0.004918 0.001695 0.000071 0.993316 0.006542 0.955987 0.006567 0.030904 0.011415 0.955314 0.009815 0.023457 0.014662 0.827591 0.006567 0.151180 0.676387 0.016311 0.289391 0.017910 0.975452 0.011439 0.008191 0.004918 0.558290 0.008191 0.428601 0.004918 MOTIF 2-CCAGCCTGGSCAACA STREME-2 letter-probability matrix: alength= 4 w= 15 nsites= 671 E= 3.4e-017 0.008631 0.958632 0.010374 0.022363 0.000049 0.941466 0.005224 0.053261 0.986070 0.001791 0.008657 0.003482 0.030946 0.001791 0.900258 0.067005 0.003482 0.946615 0.010374 0.039530 0.012064 0.955199 0.006941 0.025796 0.001765 0.010374 0.000075 0.987786 0.048111 0.006941 0.941467 0.003482 0.097908 0.001791 0.895103 0.005198 0.051546 0.457027 0.469062 0.022364 0.017214 0.795489 0.010374 0.176923 0.776561 0.008657 0.207867 0.006915 0.968905 0.001791 0.024106 0.005198 0.013781 0.901982 0.015524 0.068713 0.950023 0.017240 0.029255 0.003482 MOTIF 3-CTGTAATCCCAGCWM STREME-3 letter-probability matrix: alength= 4 w= 15 nsites= 794 E= 2.9e-016 0.005587 0.926354 0.009768 0.058291 0.005587 0.006994 0.008381 0.979037 0.080481 0.011155 0.904165 0.004200 0.002813 0.026411 0.009768 0.961008 0.931882 0.018089 0.045829 0.004200 0.736177 0.002834 0.254015 0.006974 0.008360 0.012542 0.005608 0.973491 0.008360 0.927746 0.005608 0.058286 0.006973 0.919422 0.005608 0.067997 0.005587 0.936067 0.000060 0.058286 0.969330 0.000060 0.013928 0.016681 0.055513 0.020862 0.920812 0.002813 0.019454 0.901397 0.020862 0.058286 0.483500 0.019476 0.012542 0.484482 0.477549 0.475200 0.019476 0.027776 MOTIF 4-CAAGYGATYCTCCYG STREME-4 letter-probability matrix: alength= 4 w= 15 nsites= 510 E= 1.1e-012 0.006552 0.973822 0.002258 0.017369 0.978116 0.010911 0.006584 0.004388 0.789893 0.006584 0.192644 0.010879 0.047655 0.000094 0.947862 0.004388 0.008715 0.441531 0.015238 0.534516 0.209950 0.015238 0.766097 0.008715 0.969463 0.000094 0.026055 0.004388 0.000062 0.008748 0.006585 0.984606 0.000062 0.558273 0.004421 0.437244 0.008715 0.902427 0.010911 0.077947 0.186122 0.013075 0.129906 0.670897 0.002225 0.926227 0.008748 0.062800 0.013042 0.928390 0.023892 0.034676 0.010878 0.352743 0.006584 0.629794 0.240210 0.004421 0.731510 0.023859 MOTIF 5-ATTTTTAGTAGAGAY STREME-5 letter-probability matrix: alength= 4 w= 15 nsites= 404 E= 4.3e-010 0.860098 0.000118 0.032531 0.107253 0.029789 0.021726 0.021726 0.926759 0.005479 0.008221 0.000118 0.986182 0.000077 0.005520 0.002819 0.991584 0.002778 0.005520 0.016324 0.975378 0.013582 0.019025 0.002819 0.964574 0.805205 0.008221 0.032532 0.154042 0.035191 0.002819 0.948408 0.013582 0.005479 0.024428 0.013623 0.956470 0.942965 0.000118 0.046036 0.010881 0.037894 0.029830 0.929499 0.002778 0.988883 0.008221 0.002819 0.000077 0.018984 0.010922 0.961914 0.008180 0.975378 0.002819 0.010922 0.010881 0.005479 0.632144 0.010922 0.351456 MOTIF 6-AAATTAGCYGGGCRT STREME-6 letter-probability matrix: alength= 4 w= 15 nsites= 404 E= 1.4e-008 0.972312 0.006207 0.012282 0.009199 0.963200 0.012282 0.012282 0.012236 0.948012 0.003170 0.024432 0.024386 0.012236 0.018357 0.012282 0.957125 0.015274 0.033545 0.009245 0.941936 0.966237 0.003170 0.021394 0.009199 0.018311 0.009245 0.945021 0.027423 0.009199 0.954133 0.006207 0.030461 0.018311 0.592561 0.003170 0.385958 0.306951 0.006207 0.653344 0.033498 0.045648 0.006207 0.938946 0.009199 0.048686 0.021394 0.923759 0.006161 0.009199 0.796146 0.015319 0.179335 0.440609 0.033544 0.507536 0.018311 0.012236 0.021394 0.006207 0.960162 MOTIF 7-AGGTCAGGAGTTCGA STREME-7 letter-probability matrix: alength= 4 w= 15 nsites= 447 E= 4.2e-008 0.977728 0.002550 0.007436 0.012286 0.053821 0.007436 0.919128 0.019615 0.034275 0.224905 0.682112 0.058708 0.007399 0.273774 0.002550 0.716277 0.004956 0.953332 0.004993 0.036719 0.965512 0.007436 0.024539 0.002513 0.066038 0.002550 0.919127 0.012286 0.026945 0.012323 0.960662 0.000070 0.958181 0.000107 0.024540 0.017172 0.029388 0.004993 0.965549 0.000070 0.110037 0.014766 0.051416 0.823781 0.000070 0.004993 0.002550 0.992388 0.009843 0.650314 0.048972 0.290871 0.244454 0.039199 0.706504 0.009843 0.972842 0.022095 0.004993 0.000070 MOTIF 8-AGTGCAGTGGCRCGA STREME-8 letter-probability matrix: alength= 4 w= 15 nsites= 215 E= 2.0e-006 0.967670 0.005517 0.016090 0.010723 0.010723 0.000231 0.983609 0.005437 0.000151 0.016090 0.016090 0.967670 0.058301 0.000231 0.936032 0.005437 0.010723 0.951891 0.000231 0.037155 0.957097 0.000231 0.031949 0.010723 0.164037 0.010803 0.825009 0.000151 0.005437 0.021376 0.000231 0.972956 0.000151 0.005517 0.994182 0.000151 0.021296 0.005517 0.967750 0.005437 0.010723 0.724564 0.005517 0.259196 0.333239 0.021376 0.639948 0.005437 0.021296 0.655814 0.010803 0.312087 0.253921 0.068955 0.655828 0.021296 0.967670 0.010803 0.016090 0.005437 MOTIF 9-GGTTGCAGTGAGCCR STREME-9 letter-probability matrix: alength= 4 w= 15 nsites= 240 E= 2.7e-005 0.059711 0.018532 0.907877 0.013880 0.059711 0.073531 0.825381 0.041378 0.004714 0.178944 0.000200 0.816142 0.000131 0.000200 0.004783 0.994887 0.045961 0.000200 0.939960 0.013880 0.018463 0.939959 0.000200 0.041378 0.912391 0.004783 0.064364 0.018463 0.027629 0.009366 0.962875 0.000131 0.009297 0.018532 0.023115 0.949056 0.018463 0.004783 0.976624 0.000131 0.985721 0.000200 0.013949 0.000131 0.036795 0.009366 0.953708 0.000131 0.004714 0.967457 0.009366 0.018463 0.041378 0.623683 0.032281 0.302657 0.362277 0.018532 0.605311 0.013880 MOTIF 10-CCCCGMCCCCR STREME-10 letter-probability matrix: alength= 4 w= 11 nsites= 1842 E= 5.8e-005 0.007001 0.982627 0.000053 0.010319 0.007495 0.746797 0.243244 0.002464 0.025234 0.871896 0.044686 0.058184 0.034461 0.957073 0.008431 0.000035 0.289278 0.000053 0.643614 0.067054 0.313257 0.588764 0.028436 0.069543 0.025966 0.922933 0.048206 0.002896 0.001261 0.776037 0.209225 0.013477 0.001543 0.941317 0.027072 0.030068 0.035633 0.741529 0.142313 0.080524 0.451105 0.031419 0.382724 0.134753 MOTIF 11-GCRTGAGCCACC STREME-11 letter-probability matrix: alength= 4 w= 12 nsites= 442 E= 2.1e-004 0.023635 0.000118 0.970740 0.005506 0.032655 0.858501 0.013691 0.095153 0.524790 0.008262 0.449455 0.017492 0.000077 0.078851 0.000118 0.920953 0.021794 0.005548 0.969866 0.002792 0.707697 0.168454 0.000118 0.123731 0.114103 0.002833 0.882987 0.000077 0.000077 0.961722 0.005548 0.032653 0.013651 0.963311 0.002833 0.020206 0.996971 0.000118 0.000118 0.002792 0.000077 0.997012 0.002833 0.000077 0.016366 0.765073 0.029979 0.188582 MOTIF 12-CCGCGGCCTC STREME-12 letter-probability matrix: alength= 4 w= 10 nsites= 2095 E= 8.1e-004 0.073187 0.793974 0.043845 0.088994 0.002527 0.977580 0.001334 0.018558 0.038422 0.002548 0.755220 0.203810 0.071348 0.840745 0.000102 0.087805 0.089426 0.119624 0.744101 0.046850 0.119183 0.007193 0.750115 0.123508 0.037954 0.885080 0.014082 0.062883 0.043930 0.770743 0.105427 0.079901 0.094435 0.015813 0.094439 0.795313 0.052931 0.848720 0.037903 0.060446 MOTIF 13-GACTCYGTCTCAAA STREME-13 letter-probability matrix: alength= 4 w= 14 nsites= 165 E= 2.1e-003 0.120311 0.000276 0.879233 0.000180 0.999268 0.000276 0.000276 0.000180 0.012824 0.936143 0.006598 0.044435 0.000180 0.215243 0.019242 0.765335 0.000180 0.942466 0.006598 0.050756 0.019147 0.550423 0.019242 0.411189 0.284732 0.031886 0.683201 0.000180 0.019146 0.038208 0.000276 0.942370 0.006502 0.955109 0.006598 0.031791 0.000180 0.006598 0.012920 0.980302 0.000180 0.967753 0.000276 0.031791 0.942370 0.019242 0.006598 0.031790 0.948692 0.006598 0.044530 0.000180 0.999268 0.000276 0.000276 0.000180 MOTIF 14-AACCCGGGAGGCRGA STREME-14 letter-probability matrix: alength= 4 w= 15 nsites= 195 E= 2.7e-003 0.966687 0.000238 0.032920 0.000155 0.934004 0.000238 0.054709 0.011050 0.021944 0.934086 0.011132 0.032838 0.000155 0.950427 0.000238 0.049180 0.038286 0.694391 0.016579 0.250744 0.321570 0.011132 0.650802 0.016497 0.016497 0.005685 0.977663 0.000155 0.018757 0.022026 0.959061 0.000155 0.955793 0.011132 0.022026 0.011050 0.070969 0.005685 0.912297 0.011050 0.038286 0.011132 0.934086 0.016497 0.016497 0.754313 0.043815 0.185375 0.452343 0.007945 0.528662 0.011050 0.011050 0.005685 0.983110 0.000155 0.950345 0.022026 0.022026 0.005602 MOTIF 15-GGGGTTTCACCA STREME-15 letter-probability matrix: alength= 4 w= 12 nsites= 275 E= 4.8e-003 0.242783 0.000178 0.728429 0.028610 0.069319 0.008319 0.918176 0.004187 0.053038 0.000178 0.938527 0.008257 0.034887 0.000178 0.956679 0.008257 0.000116 0.020531 0.000178 0.979176 0.000116 0.007008 0.000178 0.992698 0.000116 0.000178 0.000178 0.999529 0.012328 0.962955 0.000178 0.024540 0.909961 0.000178 0.089745 0.000116 0.008257 0.938530 0.020532 0.032681 0.000116 0.931697 0.000178 0.068009 0.848894 0.000178 0.138600 0.012328 MOTIF 16-AGACAGGGTCTYGCT STREME-16 letter-probability matrix: alength= 4 w= 15 nsites= 76 E= 1.7e-002 0.948551 0.000720 0.050258 0.000471 0.000471 0.033746 0.965312 0.000471 0.948551 0.000720 0.033745 0.016983 0.000471 0.710772 0.050258 0.238499 0.750400 0.000720 0.231896 0.016983 0.000471 0.000720 0.998338 0.000471 0.188961 0.050258 0.710773 0.050008 0.016983 0.000720 0.981825 0.000471 0.050008 0.000720 0.000720 0.948551 0.000471 0.750649 0.000720 0.248160 0.000471 0.000720 0.000720 0.998089 0.016983 0.486444 0.050258 0.446315 0.255019 0.066770 0.611689 0.066522 0.016983 0.866238 0.000720 0.116058 0.016983 0.231896 0.000720 0.750400 MOTIF 17-GCRCMYGCCACC STREME-17 letter-probability matrix: alength= 4 w= 12 nsites= 134 E= 1.1e-001 0.000184 0.136503 0.774047 0.089266 0.000184 0.700187 0.000281 0.299348 0.526965 0.000281 0.472570 0.000184 0.000184 0.999352 0.000281 0.000184 0.382413 0.617122 0.000281 0.000184 0.000184 0.450814 0.000281 0.548721 0.286088 0.051957 0.661771 0.000184 0.019507 0.980028 0.000281 0.000184 0.000184 0.999352 0.000281 0.000184 0.939705 0.000281 0.059830 0.000184 0.000184 0.978787 0.000281 0.020748 0.093032 0.906503 0.000281 0.000184 MOTIF 18-CGGAAGTGAC STREME-18 letter-probability matrix: alength= 4 w= 10 nsites= 149 E= 1.3e-001 0.301761 0.697437 0.000485 0.000317 0.000317 0.000485 0.998880 0.000317 0.000317 0.000485 0.976636 0.022561 0.963200 0.035998 0.000485 0.000317 0.998713 0.000485 0.000485 0.000317 0.155537 0.019149 0.813874 0.011439 0.000317 0.000485 0.000485 0.998713 0.000317 0.000485 0.943267 0.055931 0.778290 0.198663 0.000485 0.022562 0.073528 0.733313 0.192841 0.000317 MOTIF 19-GCCTCAGTTTCCCY STREME-19 letter-probability matrix: alength= 4 w= 14 nsites= 80 E= 2.8e-001 0.058079 0.020013 0.902185 0.019723 0.019723 0.806305 0.077542 0.096430 0.019723 0.921364 0.039189 0.019723 0.019723 0.039189 0.000836 0.940251 0.000547 0.978893 0.000836 0.019723 0.940251 0.020013 0.039189 0.000547 0.000547 0.000836 0.978893 0.019723 0.000547 0.000836 0.058365 0.940251 0.000547 0.039189 0.039189 0.921075 0.000547 0.020013 0.020013 0.959428 0.019723 0.921363 0.000836 0.058077 0.038900 0.921364 0.020013 0.019723 0.058077 0.863833 0.000836 0.077253 0.058076 0.384403 0.020013 0.537508 MOTIF 20-CCCGAG STREME-20 letter-probability matrix: alength= 4 w= 6 nsites= 1217 E= 4.1e-001 0.017973 0.936573 0.027482 0.017973 0.017973 0.936573 0.027482 0.017973 0.017973 0.936573 0.027482 0.017973 0.017973 0.027482 0.936573 0.017973 0.927064 0.027482 0.027482 0.017973 0.017973 0.027482 0.936573 0.017973 MOTIF 21-CGGGGTCACGG STREME-21 letter-probability matrix: alength= 4 w= 11 nsites= 823 E= 4.3e-001 0.017847 0.884812 0.035539 0.061802 0.070617 0.048939 0.856674 0.023771 0.043289 0.065011 0.825379 0.066321 0.016847 0.049313 0.924348 0.009492 0.032906 0.014360 0.914768 0.037966 0.152375 0.094415 0.018543 0.734667 0.035257 0.920008 0.042186 0.002550 0.525004 0.174618 0.092516 0.207862 0.043568 0.860108 0.073409 0.022916 0.050510 0.134934 0.755726 0.058831 0.024854 0.071177 0.851128 0.052840 MOTIF 22-ATGTCAC STREME-22 letter-probability matrix: alength= 4 w= 7 nsites= 211 E= 4.8e-001 0.927064 0.027482 0.027482 0.017973 0.017973 0.027482 0.027482 0.927064 0.017973 0.027482 0.936573 0.017973 0.017973 0.027482 0.027482 0.927064 0.017973 0.936573 0.027482 0.017973 0.927064 0.027482 0.027482 0.017973 0.017973 0.936573 0.027482 0.017973 MOTIF 23-GCCCAAGGTCACC STREME-23 letter-probability matrix: alength= 4 w= 13 nsites= 63 E= 5.6e-001 0.059176 0.047586 0.869366 0.023872 0.059177 0.857597 0.071123 0.012104 0.012104 0.904670 0.024049 0.059177 0.012104 0.987047 0.000513 0.000336 0.880956 0.071123 0.047586 0.000336 0.829000 0.024049 0.111311 0.035640 0.012104 0.024049 0.958627 0.005220 0.035640 0.076006 0.864482 0.023872 0.047409 0.082891 0.012281 0.857419 0.000336 0.939974 0.047586 0.012104 0.786811 0.071122 0.082891 0.059176 0.035640 0.822293 0.082891 0.059176 0.193515 0.629113 0.071123 0.106249 MOTIF 24-CCCAGCCCCA STREME-24 letter-probability matrix: alength= 4 w= 10 nsites= 3023 E= 5.7e-001 0.032275 0.881438 0.035285 0.051002 0.026381 0.823265 0.098505 0.051848 0.050737 0.852269 0.067900 0.029094 0.815380 0.075939 0.060639 0.048042 0.038348 0.061690 0.839127 0.060835 0.046967 0.863541 0.048045 0.041448 0.066343 0.855453 0.041992 0.036212 0.058744 0.789220 0.064766 0.087271 0.062071 0.801436 0.074110 0.062383 0.660866 0.051768 0.182905 0.104461 MOTIF 25-GCAGCAGCAGCAGC STREME-25 letter-probability matrix: alength= 4 w= 14 nsites= 267 E= 6.3e-001 0.018581 0.024179 0.957134 0.000105 0.023809 0.904184 0.038645 0.033361 0.879382 0.004295 0.097742 0.018581 0.003800 0.111014 0.885081 0.000105 0.075540 0.883547 0.003856 0.037056 0.811037 0.007551 0.162831 0.018581 0.074007 0.003856 0.888776 0.033361 0.044447 0.809645 0.131023 0.014886 0.716307 0.027560 0.096140 0.159993 0.022276 0.077758 0.873995 0.025971 0.081397 0.798246 0.064826 0.055531 0.664712 0.129038 0.130710 0.075540 0.125425 0.095606 0.736685 0.042285 0.011191 0.728804 0.191855 0.068150 MOTIF 26-CGTGATCYRCCYG STREME-26 letter-probability matrix: alength= 4 w= 13 nsites= 99 E= 7.0e-001 0.010982 0.625205 0.149950 0.213863 0.149788 0.011143 0.838765 0.000305 0.010982 0.021820 0.000466 0.966732 0.075045 0.000466 0.924185 0.000305 0.977409 0.021821 0.000466 0.000305 0.000305 0.085885 0.000466 0.913345 0.000305 0.998925 0.000466 0.000305 0.000305 0.663483 0.000466 0.335747 0.410497 0.000466 0.588732 0.000305 0.000305 0.998925 0.000466 0.000305 0.000305 0.892152 0.032497 0.075046 0.010982 0.639319 0.011143 0.338557 0.196932 0.058283 0.744481 0.000305 MOTIF 27-AAGATGGCGG STREME-27 letter-probability matrix: alength= 4 w= 10 nsites= 81 E= 7.0e-001 0.963519 0.009176 0.026903 0.000402 0.978432 0.006462 0.014704 0.000402 0.068468 0.092791 0.753788 0.084952 0.927084 0.036416 0.028482 0.008018 0.028269 0.004835 0.000614 0.966281 0.000402 0.014704 0.984492 0.000402 0.022109 0.021199 0.942200 0.014492 0.049393 0.933684 0.006568 0.010356 0.006921 0.085165 0.871710 0.036203 0.006249 0.045603 0.947745 0.000402 MOTIF 28-RSCCGGSY STREME-28 letter-probability matrix: alength= 4 w= 8 nsites= 1220 E= 9.1e-001 0.347365 0.001277 0.650523 0.000835 0.000835 0.662464 0.335866 0.000835 0.000835 0.997053 0.001277 0.000835 0.000835 0.997053 0.001277 0.000835 0.000835 0.001277 0.997053 0.000835 0.000835 0.001277 0.997053 0.000835 0.000835 0.335866 0.662464 0.000835 0.000835 0.650523 0.001277 0.347365 MOTIF 29-CGGGGACG STREME-29 letter-probability matrix: alength= 4 w= 8 nsites= 2044 E= 9.8e-001 0.062046 0.769720 0.000702 0.167532 0.082266 0.090463 0.826812 0.000459 0.000459 0.000702 0.949226 0.049614 0.073425 0.094488 0.831628 0.000459 0.000459 0.000702 0.998381 0.000459 0.819785 0.111068 0.000702 0.068445 0.051903 0.946937 0.000702 0.000459 0.043446 0.073481 0.779862 0.103211 MOTIF 30-AGGAGGARGRGRAR STREME-30 letter-probability matrix: alength= 4 w= 14 nsites= 570 E= 1.0e+000 0.763469 0.000084 0.232529 0.003918 0.000055 0.002016 0.997874 0.000055 0.198066 0.000886 0.795198 0.005850 0.979988 0.000084 0.000084 0.019844 0.212819 0.009742 0.746479 0.030960 0.000055 0.000084 0.999806 0.000055 0.712914 0.053038 0.137415 0.096633 0.620056 0.033722 0.313330 0.032891 0.274155 0.011674 0.714116 0.000055 0.468015 0.046113 0.333224 0.152648 0.295924 0.006681 0.656777 0.040618 0.406062 0.045312 0.548571 0.000055 0.707299 0.081683 0.141427 0.069591 0.308995 0.056901 0.610870 0.023234 MOTIF 31-ATCTGTAAAATG STREME-31 letter-probability matrix: alength= 4 w= 12 nsites= 42 E= 1.1e+000 0.944534 0.001143 0.053575 0.000748 0.026963 0.001143 0.001143 0.970751 0.000748 0.682766 0.053575 0.262912 0.000748 0.027358 0.001143 0.970751 0.131824 0.001143 0.813854 0.053179 0.000748 0.001143 0.001143 0.996966 0.813452 0.001143 0.184657 0.000748 0.892106 0.053573 0.053573 0.000748 0.944536 0.027358 0.001143 0.026963 0.944534 0.001143 0.053575 0.000748 0.000748 0.027358 0.001143 0.970751 0.053179 0.001143 0.944930 0.000748 MOTIF 32-AAATAAATAAATAW STREME-32 letter-probability matrix: alength= 4 w= 14 nsites= 493 E= 1.3e+000 0.884064 0.038362 0.014975 0.062599 0.841543 0.019227 0.014975 0.124255 0.793526 0.044740 0.083009 0.078725 0.043464 0.124603 0.054127 0.777806 0.853056 0.025605 0.025605 0.095733 0.848283 0.097892 0.022236 0.031590 0.801148 0.034110 0.048992 0.115750 0.131870 0.212709 0.031984 0.623437 0.782014 0.042614 0.043496 0.131876 0.747114 0.100017 0.053244 0.099624 0.682971 0.104270 0.076631 0.136129 0.248861 0.126727 0.031984 0.592429 0.689710 0.053244 0.071135 0.185911 0.382626 0.085135 0.066001 0.466238 MOTIF 33-AAAAMAAAAAMAAAA STREME-33 letter-probability matrix: alength= 4 w= 15 nsites= 183 E= 1.7e+000 0.982036 0.000370 0.000370 0.017224 0.931090 0.059806 0.008861 0.000242 0.985777 0.013610 0.000370 0.000242 0.999017 0.000370 0.000370 0.000242 0.346876 0.390817 0.106516 0.155791 0.999017 0.000370 0.000370 0.000242 0.999017 0.000370 0.000370 0.000242 0.855304 0.127102 0.000370 0.017224 0.990526 0.008861 0.000370 0.000242 0.893371 0.094002 0.012385 0.000242 0.408001 0.302312 0.167859 0.121829 0.973545 0.000370 0.000370 0.025715 0.999017 0.000370 0.000370 0.000242 0.914109 0.076788 0.000370 0.008733 0.734048 0.077013 0.153366 0.035572 MOTIF 34-GCCACYGCRCCTGGC STREME-34 letter-probability matrix: alength= 4 w= 15 nsites= 48 E= 1.1e+001 0.000508 0.000777 0.944774 0.053941 0.000508 0.944774 0.054210 0.000508 0.000508 0.748852 0.054210 0.196430 0.980127 0.000777 0.018588 0.000508 0.036130 0.891341 0.000777 0.071752 0.000508 0.374812 0.018588 0.606092 0.160809 0.072021 0.731040 0.036130 0.000508 0.873529 0.000777 0.125186 0.534849 0.089832 0.285755 0.089564 0.000508 0.944774 0.000777 0.053941 0.000508 0.837907 0.143266 0.018319 0.000508 0.196701 0.107643 0.695148 0.178621 0.000777 0.820094 0.000508 0.018319 0.072021 0.909152 0.000508 0.000508 0.891341 0.054210 0.053941 MOTIF 35-CTGGGCAAGTTCMYT STREME-35 letter-probability matrix: alength= 4 w= 15 nsites= 49 E= 1.8e+001 0.065632 0.802778 0.044287 0.087303 0.022289 0.000945 0.000945 0.975820 0.022289 0.022616 0.781107 0.173987 0.022289 0.022616 0.932805 0.022289 0.043960 0.022616 0.802778 0.130645 0.000618 0.889463 0.000945 0.108974 0.932478 0.044287 0.000945 0.022289 0.889136 0.087630 0.000945 0.022289 0.022289 0.087630 0.867792 0.022289 0.000618 0.022616 0.130972 0.845793 0.087303 0.152643 0.022616 0.737438 0.173987 0.629409 0.152643 0.043960 0.520726 0.282670 0.022616 0.173987 0.043960 0.521053 0.065959 0.369028 0.087303 0.260999 0.022616 0.629082 MOTIF 36-GGYGACAGAGYGA STREME-36 letter-probability matrix: alength= 4 w= 13 nsites= 32 E= 1.8e+001 0.000887 0.001357 0.996869 0.000887 0.031996 0.001357 0.934650 0.031996 0.063107 0.499109 0.063575 0.374209 0.031996 0.001357 0.934650 0.031996 0.965290 0.001357 0.001357 0.031996 0.000887 0.903541 0.001357 0.094215 0.996399 0.001357 0.001357 0.000887 0.031996 0.001357 0.965760 0.000887 0.996399 0.001357 0.001357 0.000887 0.125325 0.001357 0.872431 0.000887 0.000887 0.530226 0.063577 0.405310 0.125324 0.001357 0.872432 0.000887 0.903072 0.032466 0.063575 0.000887 ******************************************************************************** Stopped because 3 consecutive motifs exceeded the p-value threshold (0.05). ******************************************************************************** COMMAND: streme --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d0_TRIM1_0_peaks/streme_out -dna --p /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d0_TRIM1_0_peaks/seqs-centered --minw 6 --maxw 15 --order 2 ******************************************************************************** CPU: cn45 ******************************************************************************** FINALTIME: 1149.57 seconds ********************************************************************************