Query_ID	Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query_consensus	Target_consensus	Orientation
CCTGTAATCCCAGCW	MA0107.1	-2	0.0471405	0.188562	0.377124	10	CCTGTAATCCCAGCA	GGAAATTCCC	-
CCAGCCTGGSCAACA	MA0466.3	-3	0.0290556	0.116223	0.120398	12	CCAGCCTGGCCAACA	TATTGCGCAATA	-
CCAGCCTGGSCAACA	MA0466.2	-4	0.0737853	0.295141	0.196761	10	CCAGCCTGGCCAACA	ATTGCGCAAT	+
CCAGCCTGGSCAACA	MA0466.1	-4	0.128503	0.514013	0.257006	11	CCAGCCTGGCCAACA	ATTGTGCAATA	-
GTGAAACCCYRTCTC	MA0107.1	-1	0.0412953	0.165181	0.330362	10	GTGAAACCCCGTCTC	GGAAATTCCC	-
GCTCACTGCAACCTC	MA0466.1	-3	0.212602	0.85041	0.729013	11	GCTCACTGCAACCTC	TATTGCACAAT	+
ATCRYGCCACTGCAC	MA0466.2	0	0.00264486	0.0105795	0.0211589	10	ATCGCGCCACTGCAC	ATTGCGCAAT	+
ATCRYGCCACTGCAC	MA0466.1	1	0.0244467	0.097787	0.0623366	10	ATCGCGCCACTGCAC	TATTGCACAAT	+
ATCRYGCCACTGCAC	MA0466.3	1	0.0376099	0.15044	0.0623366	11	ATCGCGCCACTGCAC	TATTGCGCAATA	+

# Tomtom (Motif Comparison Tool): Version 5.4.1 compiled on Aug  1 2022 at 17:19:44
# The format of this file is described at https://meme-suite.org/meme/doc/tomtom-output-format.html.
# tomtom -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d0_TRIM1_0_peaks/meme_tomtom_out -min-overlap 5 -dist pearson -evalue -thresh 1 -no-ssc /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_d0_TRIM1_0_peaks/meme_out/meme.xml combined.meme