MOTIF_INDEX MOTIF_SOURCE MOTIF_ID ALT_ID CONSENSUS WIDTH SITES E-VALUE E-VALUE_SOURCE MOST_SIMILAR_MOTIF_SOURCE MOST_SIMILAR_MOTIF URL 1 MEME AAAAAWAMAAAAAWW MEME-1 AAAAAWAMAAAAAWW 15 2461 3.3e-250 MEME 2 MEME CCTGTAATCCCAGCW MEME-2 CCTGTAATCCCAGCW 15 973 1.7e-180 MEME combined.meme MA0107.1 (RELA) http://jaspar.genereg.net/matrix/MA0107.1 3 MEME CYGCCKCVGCCTCCC MEME-3 CYGCCKCVGCCTCCC 15 3373 2.0e-137 MEME 4 MEME AAACCCYRTCTCTAC MEME-4 AAACCCYRTCTCTAC 15 851 1.2e-118 MEME combined.meme MA0107.1 (RELA) http://jaspar.genereg.net/matrix/MA0107.1 5 MEME CCACCRYGCCYRGCY MEME-5 CCACCRYGCCYRGCY 15 887 1.9e-104 MEME 6 MEME AGGCTGGAGTGCAGT MEME-6 AGGCTGGAGTGCAGT 15 311 1.5e-081 MEME combined.meme MA0466.1 (CEBPB) http://jaspar.genereg.net/matrix/MA0466.1 7 MEME TGGTCTCGAACTCCT MEME-7 TGGTCTCGAACTCCT 15 512 4.5e-079 MEME 8 MEME GRSYTCAAGYGATYC MEME-8 GRSYTCAAGYGATYC 15 804 2.3e-061 MEME 9 MEME ACCATGTTGGCCAGG MEME-9 ACCATGTTGGCCAGG 15 575 4.3e-050 MEME combined.meme MA0466.3 (CEBPB) http://jaspar.genereg.net/matrix/MA0466.3 10 STREME 1-GCCTCRGCCTCCYRA STREME-1 GCCTCRGCCTCCYRA 15 1354 5.0e-030 STREME 11 MEME GATCTCGGCTCACTG MEME-10 GATCTCGGCTCACTG 15 348 1.1e-026 MEME 12 STREME 2-CTGTAATCCCAGCWM STREME-2 CTGTAATCCCAGCWM 15 1113 1.3e-026 STREME combined.meme MA0107.1 (RELA) http://jaspar.genereg.net/matrix/MA0107.1 13 STREME 3-AGCCTGGSCAACAKR STREME-3 AGCCTGGSCAACAKR 15 935 8.2e-026 STREME combined.meme MA0466.3 (CEBPB) http://jaspar.genereg.net/matrix/MA0466.3 14 STREME 4-CCACCRYGCCYRGC STREME-4 CCACCRYGCCYRGC 14 970 2.6e-021 STREME 15 STREME 5-TCAAGYGATYCTCCY STREME-5 TCAAGYGATYCTCCY 15 832 6.7e-016 STREME combined.meme MA0107.1 (RELA) http://jaspar.genereg.net/matrix/MA0107.1 16 STREME 6-CRTCTCTACTAAAA STREME-6 CRTCTCTACTAAAA 14 589 4.8e-012 STREME 17 STREME 7-GGAGTGCAGTGGCRC STREME-7 GGAGTGCAGTGGCRC 15 419 1.1e-010 STREME combined.meme MA0466.1 (CEBPB) http://jaspar.genereg.net/matrix/MA0466.1 18 STREME 8-CCCCRCCCC STREME-8 CCCCRCCCC 9 1904 4.8e-009 STREME 19 STREME 9-GTCTCAAAAAAAAAA STREME-9 GTCTCAAAAAAAAAA 15 291 3.0e-008 STREME 20 STREME 10-ATACAAAAATTA STREME-10 10-ATACAAAAATTA 12 436 1.6e-007 STREME 21 STREME 11-CAGTGAGCCGAGATC STREME-11 11-CAGTGAGCCGAGATC 15 435 4.9e-007 STREME 22 STREME 12-GGGTTTCAC STREME-12 12-GGGTTTCAC 9 286 9.6e-007 STREME combined.meme MA0107.1 (RELA) http://jaspar.genereg.net/matrix/MA0107.1 23 STREME 13-GAGACRGRGTCTC STREME-13 13-GAGACRGRGTCTC 13 179 2.6e-003 STREME combined.meme MA0107.1 (RELA) http://jaspar.genereg.net/matrix/MA0107.1 24 STREME 14-CCCCTTCCC STREME-14 14-CCCCTTCCC 9 1391 1.5e-002 STREME combined.meme MA0107.1 (RELA) http://jaspar.genereg.net/matrix/MA0107.1 25 STREME 15-ATTACAGGCGTGAG STREME-15 15-ATTACAGGCGTGAG 14 104 1.8e-002 STREME 26 STREME 16-AAASAAAAAAAAAAA STREME-16 16-AAASAAAAAAAAAAA 15 154 2.4e-002 STREME # MEME-ChIP (Motif Analysis of Large Nucleotide Datasets): Version 5.4.1 released on Sat Aug 21 19:23:23 2021 -0700 # The format of this file is described at https://meme-suite.org/meme//doc/meme-chip-output-format.html # meme-chip -db combined.meme /scratch/jngalang/MotifAnalysis/PeakFiles/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta -oc /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks -meme-nmotifs 10