******************************************************************************** STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation ******************************************************************************** MEME version 5.4.1 (Release date: Sat Aug 21 19:23:23 2021 -0700) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey, "STREME: accurate and versatile sequence motif discovery", Bioinformatics, Mar. 24, 2021. ******************************************************************************** ALPHABET= ACGT strands: + - Background letter frequencies A 0.203 C 0.297 G 0.297 T 0.203 MOTIF 1-GCCTCRGCCTCCYRA STREME-1 letter-probability matrix: alength= 4 w= 15 nsites= 1354 E= 5.0e-030 0.240281 0.011473 0.730247 0.017999 0.004926 0.809449 0.000035 0.185590 0.000024 0.968869 0.001669 0.029438 0.000024 0.004120 0.000035 0.995821 0.005743 0.838081 0.000035 0.156141 0.549503 0.060505 0.353196 0.036796 0.230530 0.011473 0.754705 0.003292 0.147184 0.787391 0.007388 0.058038 0.000024 0.959882 0.004120 0.035974 0.006560 0.000035 0.003303 0.990102 0.003292 0.954980 0.002486 0.039242 0.002475 0.965601 0.000852 0.031072 0.022901 0.625480 0.002486 0.349133 0.486490 0.024547 0.479135 0.009828 0.836477 0.004120 0.152842 0.006560 MOTIF 2-CTGTAATCCCAGCWM STREME-2 letter-probability matrix: alength= 4 w= 15 nsites= 1113 E= 1.3e-026 0.005062 0.937481 0.001050 0.056407 0.008082 0.007089 0.005076 0.979752 0.074531 0.015142 0.904258 0.006069 0.004056 0.030242 0.005759 0.959944 0.957604 0.009103 0.027224 0.006069 0.745859 0.005076 0.241989 0.007076 0.006069 0.018162 0.001050 0.974719 0.004056 0.948143 0.005494 0.042308 0.011102 0.919950 0.007089 0.061858 0.003049 0.937481 0.000043 0.059427 0.987805 0.001050 0.009103 0.002043 0.051380 0.010109 0.938481 0.000029 0.017142 0.938495 0.010109 0.034254 0.468772 0.008096 0.011534 0.511598 0.498511 0.460144 0.025210 0.016135 MOTIF 3-AGCCTGGSCAACAKR STREME-3 letter-probability matrix: alength= 4 w= 15 nsites= 935 E= 8.2e-026 0.993907 0.001242 0.004816 0.000035 0.023859 0.014346 0.852149 0.109646 0.003608 0.968909 0.001242 0.026241 0.010755 0.955806 0.006007 0.027432 0.004800 0.009580 0.000051 0.985569 0.036961 0.000051 0.960571 0.002417 0.096544 0.004816 0.893841 0.004800 0.032692 0.428593 0.507708 0.031007 0.009564 0.752722 0.008389 0.229325 0.775317 0.000051 0.218642 0.005991 0.981996 0.001242 0.015536 0.001226 0.004800 0.921256 0.014345 0.059599 0.972465 0.001242 0.020302 0.005991 0.083428 0.095363 0.299009 0.522201 0.449796 0.004816 0.537712 0.007676 MOTIF 4-CCACCRYGCCYRGC STREME-4 letter-probability matrix: alength= 4 w= 14 nsites= 970 E= 2.6e-021 0.009218 0.958749 0.003493 0.028540 0.004626 0.967738 0.001197 0.026439 0.999868 0.000049 0.000049 0.000034 0.004626 0.962670 0.004641 0.028063 0.003478 0.794812 0.011530 0.190181 0.656221 0.002345 0.333364 0.008070 0.016583 0.587095 0.010382 0.385940 0.252463 0.000049 0.723345 0.024143 0.005774 0.949565 0.006742 0.037919 0.003478 0.971183 0.003493 0.021846 0.037725 0.615343 0.008085 0.338847 0.358165 0.005896 0.626721 0.009218 0.046432 0.000049 0.950042 0.003478 0.008070 0.959702 0.004641 0.027587 MOTIF 5-TCAAGYGATYCTCCY STREME-5 letter-probability matrix: alength= 4 w= 15 nsites= 832 E= 6.7e-016 0.000038 0.000056 0.006632 0.993273 0.003984 0.970934 0.001371 0.023711 0.982752 0.009262 0.002687 0.005299 0.728857 0.048736 0.207902 0.014505 0.040807 0.002687 0.955153 0.001354 0.018450 0.414470 0.025044 0.542036 0.196038 0.073725 0.715733 0.014505 0.968286 0.005317 0.025044 0.001354 0.002669 0.007947 0.005317 0.984067 0.000038 0.543303 0.002687 0.453972 0.002669 0.865709 0.004002 0.127621 0.188152 0.009262 0.163152 0.639433 0.006614 0.927534 0.005317 0.060535 0.028972 0.919642 0.015838 0.035548 0.005299 0.355211 0.009262 0.630228 MOTIF 6-CRTCTCTACTAAAA STREME-6 letter-probability matrix: alength= 4 w= 14 nsites= 589 E= 4.8e-012 0.020362 0.672827 0.009310 0.297501 0.388118 0.009310 0.589595 0.012977 0.012977 0.022233 0.000079 0.964711 0.001900 0.962890 0.009310 0.025900 0.000054 0.009310 0.005617 0.985019 0.000054 0.942580 0.014848 0.042518 0.005592 0.037002 0.001925 0.955480 0.981327 0.003771 0.009310 0.005592 0.014823 0.918580 0.007464 0.059133 0.180995 0.033310 0.005617 0.780077 0.970249 0.000079 0.024079 0.005592 0.979480 0.014848 0.001925 0.003746 0.981327 0.003771 0.011156 0.003746 0.955481 0.016694 0.014848 0.012977 MOTIF 7-GGAGTGCAGTGGCRC STREME-7 letter-probability matrix: alength= 4 w= 15 nsites= 419 E= 1.1e-010 0.032846 0.000108 0.959410 0.007636 0.035367 0.000108 0.961930 0.002595 0.977021 0.002629 0.020276 0.000074 0.035367 0.000108 0.964451 0.000074 0.017720 0.016280 0.012713 0.953287 0.073181 0.005150 0.919074 0.002595 0.005116 0.949326 0.005150 0.040409 0.964417 0.015234 0.017755 0.002595 0.146301 0.005150 0.840912 0.007636 0.002595 0.012713 0.005150 0.979543 0.037888 0.000108 0.961930 0.000074 0.045451 0.002629 0.951846 0.000074 0.002595 0.666903 0.012713 0.317790 0.360686 0.012713 0.593755 0.032846 0.020241 0.661873 0.017755 0.300131 MOTIF 8-CCCCRCCCC STREME-8 letter-probability matrix: alength= 4 w= 9 nsites= 1904 E= 4.8e-009 0.000108 0.999626 0.000158 0.000108 0.000108 0.999626 0.000158 0.000108 0.000108 0.999626 0.000158 0.000108 0.000108 0.902366 0.051293 0.046233 0.585432 0.000158 0.414302 0.000108 0.116915 0.555848 0.188487 0.138750 0.000108 0.999626 0.000158 0.000108 0.000108 0.999626 0.000158 0.000108 0.000108 0.931750 0.000158 0.067984 MOTIF 9-GTCTCAAAAAAAAAA STREME-9 letter-probability matrix: alength= 4 w= 15 nsites= 291 E= 3.0e-008 0.298781 0.027310 0.673795 0.000113 0.011746 0.015678 0.007922 0.964654 0.011746 0.980219 0.000166 0.007869 0.003991 0.007922 0.000166 0.987921 0.005600 0.974732 0.000166 0.019501 0.976288 0.015678 0.007921 0.000113 0.975541 0.000913 0.023432 0.000113 0.980166 0.000166 0.019555 0.000113 0.976289 0.011799 0.004044 0.007869 0.910368 0.046698 0.011800 0.031134 0.914245 0.038943 0.015677 0.031135 0.867705 0.054459 0.031188 0.046648 0.883224 0.058332 0.023433 0.035012 0.937512 0.019554 0.011799 0.031134 0.929756 0.035065 0.015678 0.019501 MOTIF 10-ATACAAAAATTA STREME-10 letter-probability matrix: alength= 4 w= 12 nsites= 436 E= 1.6e-007 0.964603 0.008212 0.027107 0.000079 0.000079 0.027362 0.000116 0.972444 0.994292 0.000116 0.005513 0.000079 0.000079 0.955075 0.000116 0.044731 0.988894 0.000116 0.010911 0.000079 0.967305 0.016308 0.005513 0.010874 0.983498 0.005513 0.002814 0.008175 0.980799 0.008212 0.005513 0.005476 0.983497 0.008212 0.008212 0.000079 0.260636 0.010911 0.002814 0.725639 0.087754 0.032506 0.002814 0.876926 0.769208 0.000116 0.008212 0.222464 MOTIF 11-CAGTGAGCCGAGATC STREME-11 letter-probability matrix: alength= 4 w= 15 nsites= 435 E= 4.9e-007 0.012564 0.944787 0.005103 0.037546 0.922270 0.017594 0.042576 0.017560 0.022556 0.000107 0.969769 0.007567 0.002571 0.022590 0.000107 0.974731 0.027553 0.007601 0.957279 0.007567 0.984724 0.000107 0.012598 0.002571 0.025054 0.012598 0.957279 0.005069 0.002571 0.944787 0.007601 0.045040 0.040046 0.642432 0.017594 0.299927 0.307410 0.012598 0.672425 0.007567 0.849822 0.002605 0.002605 0.144968 0.022558 0.005103 0.972266 0.000073 0.947252 0.002605 0.047572 0.002571 0.002571 0.030085 0.002605 0.964739 0.015062 0.669951 0.067562 0.247426 MOTIF 12-GGGTTTCAC STREME-12 letter-probability matrix: alength= 4 w= 9 nsites= 286 E= 9.6e-007 0.018436 0.027018 0.936109 0.018436 0.018436 0.027018 0.936109 0.018436 0.018436 0.027018 0.936109 0.018436 0.018436 0.027018 0.027018 0.927527 0.018436 0.027018 0.027018 0.927527 0.018436 0.027018 0.027018 0.927527 0.018436 0.936109 0.027018 0.018436 0.927527 0.027018 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 MOTIF 13-GAGACRGRGTCTC STREME-13 letter-probability matrix: alength= 4 w= 13 nsites= 179 E= 2.6e-003 0.088137 0.005951 0.882918 0.022994 0.987930 0.000245 0.000245 0.011580 0.062943 0.028778 0.902405 0.005874 0.987930 0.000245 0.011658 0.000167 0.000167 0.734533 0.028779 0.236521 0.657897 0.011658 0.330278 0.000167 0.108596 0.023072 0.868165 0.000167 0.403439 0.028778 0.550495 0.017287 0.059603 0.005951 0.888625 0.045821 0.028701 0.000245 0.000245 0.970810 0.000167 0.735500 0.000245 0.264088 0.000167 0.005951 0.000245 0.993637 0.000167 0.776414 0.000245 0.223174 MOTIF 14-CCCCTTCCC STREME-14 letter-probability matrix: alength= 4 w= 9 nsites= 1391 E= 1.5e-002 0.000234 0.963146 0.000343 0.036277 0.024974 0.827917 0.067849 0.079261 0.026913 0.905043 0.000343 0.067702 0.000234 0.999189 0.000343 0.000234 0.000234 0.000343 0.000343 0.999080 0.019553 0.281594 0.063645 0.635208 0.000234 0.999189 0.000343 0.000234 0.000234 0.999189 0.000343 0.000234 0.000234 0.895596 0.000343 0.103827 MOTIF 15-ATTACAGGCGTGAG STREME-15 letter-probability matrix: alength= 4 w= 14 nsites= 104 E= 1.8e-002 0.968968 0.000629 0.029974 0.000429 0.000429 0.044647 0.000629 0.954294 0.000429 0.000629 0.015302 0.983640 0.983640 0.000629 0.015302 0.000429 0.015102 0.969167 0.000629 0.015102 0.998312 0.000629 0.000629 0.000429 0.015102 0.000629 0.983840 0.000429 0.015102 0.000629 0.983840 0.000429 0.029774 0.807752 0.000629 0.161845 0.176514 0.029975 0.778410 0.015102 0.015102 0.073998 0.000629 0.910271 0.029775 0.073998 0.895798 0.000429 0.646164 0.220723 0.044647 0.088466 0.059119 0.000629 0.939822 0.000429 MOTIF 16-AAASAAAAAAAAAAA STREME-16 letter-probability matrix: alength= 4 w= 15 nsites= 154 E= 2.4e-002 0.999052 0.000353 0.000353 0.000241 0.999052 0.000353 0.000353 0.000241 0.999052 0.000353 0.000353 0.000241 0.000241 0.495641 0.503877 0.000241 0.999052 0.000353 0.000353 0.000241 0.999052 0.000353 0.000353 0.000241 0.999052 0.000353 0.000353 0.000241 0.569431 0.206470 0.223859 0.000241 0.655311 0.195689 0.148759 0.000241 0.824897 0.104032 0.070830 0.000241 0.857317 0.091034 0.051408 0.000241 0.689856 0.103419 0.206484 0.000241 0.999052 0.000353 0.000353 0.000241 0.753891 0.125975 0.070431 0.049702 0.999052 0.000353 0.000353 0.000241 MOTIF 17-GCCGCCGCCGCCGCC STREME-17 letter-probability matrix: alength= 4 w= 15 nsites= 417 E= 5.9e-002 0.012150 0.058029 0.920695 0.009126 0.004359 0.926948 0.028060 0.040632 0.034425 0.918236 0.011095 0.036243 0.054470 0.000118 0.924621 0.020791 0.002824 0.947582 0.000118 0.049476 0.000080 0.847992 0.003188 0.148740 0.014611 0.000118 0.969119 0.016153 0.000080 0.928841 0.000118 0.070961 0.001910 0.915285 0.027328 0.055477 0.016549 0.005606 0.896517 0.081328 0.012196 0.963901 0.000118 0.023786 0.002824 0.937455 0.004755 0.054965 0.093647 0.000673 0.743273 0.162407 0.019289 0.922884 0.000118 0.057709 0.056504 0.793245 0.060309 0.089942 MOTIF 18-GTCTTGAACTCCTGA STREME-18 letter-probability matrix: alength= 4 w= 15 nsites= 116 E= 7.2e-002 0.052309 0.021248 0.905337 0.021107 0.021106 0.031649 0.010847 0.936398 0.031507 0.874133 0.062852 0.031508 0.010705 0.031649 0.031649 0.925998 0.083513 0.218867 0.031650 0.665970 0.000304 0.021248 0.967743 0.010705 0.946799 0.031649 0.021248 0.000304 0.936398 0.000446 0.021248 0.041908 0.073111 0.655714 0.010847 0.260329 0.062710 0.083654 0.031650 0.821986 0.021107 0.874133 0.021248 0.083513 0.062710 0.874135 0.010847 0.052309 0.021106 0.021248 0.000446 0.957200 0.031507 0.062853 0.894935 0.010705 0.749179 0.042049 0.208467 0.000304 MOTIF 19-CCTCGTGATCCGCC STREME-19 letter-probability matrix: alength= 4 w= 14 nsites= 105 E= 7.2e-002 0.000298 0.968405 0.020811 0.010485 0.000298 0.958218 0.010624 0.030860 0.010485 0.000437 0.000437 0.988641 0.000298 0.723872 0.020811 0.255019 0.091987 0.000437 0.886904 0.020673 0.000298 0.000437 0.000437 0.998828 0.000298 0.020811 0.978593 0.000298 0.988641 0.000437 0.010624 0.000298 0.000298 0.030998 0.000437 0.968267 0.000298 0.978593 0.000437 0.020673 0.010485 0.713700 0.000437 0.275378 0.275443 0.030999 0.683073 0.010485 0.000298 0.968405 0.010624 0.020673 0.000298 0.948031 0.000437 0.051234 MOTIF 20-MGGAAGTG STREME-20 letter-probability matrix: alength= 4 w= 8 nsites= 595 E= 7.6e-002 0.617364 0.381855 0.000464 0.000317 0.001065 0.005312 0.976160 0.017463 0.000317 0.002732 0.976983 0.019968 0.997814 0.000464 0.000464 0.001259 0.977135 0.006127 0.000464 0.016274 0.000317 0.048761 0.949114 0.001808 0.000317 0.126659 0.000464 0.872560 0.092387 0.094347 0.791686 0.021581 MOTIF 21-CGGGGAC STREME-21 letter-probability matrix: alength= 4 w= 7 nsites= 3587 E= 7.7e-002 0.000290 0.880835 0.000425 0.118450 0.000290 0.204728 0.794692 0.000290 0.041985 0.002818 0.954303 0.000894 0.017900 0.040222 0.863856 0.078022 0.040565 0.015537 0.939736 0.004162 0.806145 0.000425 0.000425 0.193005 0.000290 0.981638 0.000425 0.017647 MOTIF 22-ACCCRGGAGGCGGAG STREME-22 letter-probability matrix: alength= 4 w= 15 nsites= 186 E= 1.4e-001 0.999365 0.000237 0.000237 0.000162 0.000162 0.999440 0.000237 0.000162 0.011202 0.971840 0.011277 0.005682 0.044323 0.695825 0.033357 0.226494 0.314824 0.022317 0.596455 0.066403 0.105046 0.000237 0.894556 0.000162 0.066403 0.027837 0.894558 0.011202 0.938644 0.005757 0.000237 0.055363 0.049844 0.016797 0.916637 0.016722 0.082964 0.027837 0.883517 0.005682 0.044323 0.684782 0.005757 0.265139 0.309300 0.011277 0.679261 0.000162 0.005682 0.011277 0.982880 0.000162 0.922083 0.005757 0.066479 0.005682 0.094005 0.011277 0.894557 0.000162 MOTIF 23-GAGGCCGAGGC STREME-23 letter-probability matrix: alength= 4 w= 11 nsites= 1585 E= 1.8e-001 0.034820 0.038536 0.885022 0.041622 0.865774 0.056153 0.036578 0.041495 0.045445 0.098519 0.801241 0.054794 0.037458 0.060348 0.874044 0.028150 0.054977 0.840401 0.052690 0.051932 0.062345 0.814114 0.043336 0.080204 0.062902 0.075661 0.817858 0.043580 0.778105 0.080342 0.084552 0.057001 0.047743 0.078736 0.835160 0.038360 0.044032 0.106627 0.803910 0.045432 0.065945 0.737852 0.096357 0.099847 MOTIF 24-GAGTTCGAGACC STREME-24 letter-probability matrix: alength= 4 w= 12 nsites= 149 E= 2.1e-001 0.039286 0.029668 0.891760 0.039285 0.862378 0.049168 0.068669 0.019785 0.019785 0.010168 0.969761 0.000285 0.136792 0.058919 0.000418 0.803872 0.010035 0.029668 0.010168 0.950128 0.039286 0.556196 0.146677 0.257841 0.097789 0.049169 0.852757 0.000285 0.975332 0.010168 0.000418 0.014082 0.088037 0.088171 0.823507 0.000285 0.862377 0.019918 0.039418 0.078286 0.019785 0.872259 0.068670 0.039285 0.000285 0.989261 0.000418 0.010035 MOTIF 25-ACAGAGYGAGACT STREME-25 letter-probability matrix: alength= 4 w= 13 nsites= 87 E= 2.9e-001 0.998541 0.000544 0.000544 0.000371 0.034346 0.888623 0.000544 0.076487 0.985855 0.000544 0.000544 0.013057 0.076487 0.102032 0.694249 0.127231 0.998541 0.000544 0.000544 0.000371 0.076487 0.000544 0.871854 0.051115 0.051116 0.495317 0.063975 0.389592 0.279467 0.000544 0.694246 0.025743 0.998541 0.000544 0.000544 0.000371 0.089173 0.000544 0.909912 0.000371 0.998541 0.000544 0.000544 0.000371 0.000371 0.935283 0.025916 0.038429 0.000371 0.266952 0.000544 0.732132 MOTIF 26-GCAGCAGCAGCAGCA STREME-26 letter-probability matrix: alength= 4 w= 15 nsites= 194 E= 4.8e-001 0.000170 0.067912 0.914349 0.017569 0.040768 0.849605 0.066452 0.043175 0.981934 0.011848 0.006048 0.000170 0.081366 0.040847 0.877618 0.000170 0.000170 0.970413 0.029247 0.000170 0.838912 0.014255 0.057260 0.089573 0.058167 0.006048 0.924016 0.011769 0.029168 0.765016 0.176647 0.029168 0.727732 0.052446 0.155855 0.063967 0.040768 0.087244 0.842820 0.029168 0.029168 0.895017 0.035047 0.040768 0.757716 0.101251 0.080459 0.060574 0.076255 0.058246 0.859530 0.005969 0.034968 0.765016 0.188247 0.011769 0.646535 0.081446 0.089652 0.182368 MOTIF 27-CCCAGCTAC STREME-27 letter-probability matrix: alength= 4 w= 9 nsites= 62 E= 5.8e-001 0.018436 0.936109 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 0.927527 0.027018 0.027018 0.018436 0.018436 0.027018 0.936109 0.018436 0.018436 0.936109 0.027018 0.018436 0.018436 0.027018 0.027018 0.927527 0.927527 0.027018 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 MOTIF 28-AGCCCCG STREME-28 letter-probability matrix: alength= 4 w= 7 nsites= 657 E= 6.8e-001 0.927527 0.027018 0.027018 0.018436 0.018436 0.027018 0.936109 0.018436 0.018436 0.936109 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 0.018436 0.027018 0.936109 0.018436 MOTIF 29-AAATAAATG STREME-29 letter-probability matrix: alength= 4 w= 9 nsites= 381 E= 1.0e+000 0.864528 0.066113 0.052230 0.017128 0.910775 0.005206 0.044202 0.039817 0.932870 0.001910 0.030257 0.034963 0.000367 0.042630 0.038861 0.918141 0.971095 0.009647 0.013914 0.005344 0.922256 0.037025 0.033052 0.007668 0.911819 0.006668 0.055321 0.026193 0.000367 0.002243 0.000538 0.996852 0.255490 0.041367 0.626098 0.077045 MOTIF 30-GCRTGAGCCACCRC STREME-30 letter-probability matrix: alength= 4 w= 14 nsites= 109 E= 1.2e+000 0.031182 0.000441 0.968075 0.000301 0.010595 0.741612 0.021029 0.226765 0.370881 0.031324 0.566613 0.031183 0.010595 0.000441 0.010735 0.978229 0.041476 0.000441 0.947488 0.010595 0.926760 0.041617 0.000441 0.031182 0.020889 0.000441 0.978369 0.000301 0.000301 0.998956 0.000441 0.000301 0.000301 0.947488 0.000441 0.051770 0.937054 0.000441 0.051910 0.010595 0.000301 0.957782 0.010735 0.031182 0.062064 0.628379 0.031323 0.278235 0.340005 0.041617 0.607784 0.010595 0.000301 0.700437 0.051910 0.247352 MOTIF 31-RGGAAACTGAGGCHC STREME-31 letter-probability matrix: alength= 4 w= 15 nsites= 132 E= 1.2e+000 0.484300 0.000329 0.476727 0.038644 0.123164 0.000329 0.853230 0.023276 0.084746 0.015697 0.837863 0.061695 0.929963 0.023381 0.000329 0.046327 0.968381 0.008013 0.023381 0.000225 0.953014 0.000329 0.046432 0.000225 0.000225 0.922384 0.038748 0.038643 0.007909 0.069483 0.061799 0.860810 0.054011 0.031064 0.907016 0.007909 0.983749 0.000329 0.015697 0.000225 0.084746 0.038748 0.876282 0.000225 0.123164 0.023381 0.776393 0.077062 0.007909 0.914700 0.023381 0.054011 0.299894 0.353783 0.015697 0.330626 0.084746 0.568930 0.215476 0.130848 MOTIF 32-CCCGGGCC STREME-32 letter-probability matrix: alength= 4 w= 8 nsites= 422 E= 1.4e+000 0.018436 0.936109 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 0.018436 0.027018 0.936109 0.018436 0.018436 0.027018 0.936109 0.018436 0.018436 0.027018 0.936109 0.018436 0.018436 0.936109 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 MOTIF 33-TAATTTTTAA STREME-33 letter-probability matrix: alength= 4 w= 10 nsites= 154 E= 1.4e+000 0.000383 0.000561 0.000561 0.998496 0.862833 0.000561 0.000561 0.136045 0.998496 0.000561 0.000561 0.000383 0.000383 0.000561 0.000561 0.998496 0.028396 0.000561 0.013638 0.957405 0.095328 0.039793 0.001778 0.863101 0.160113 0.016157 0.021584 0.802146 0.000383 0.000561 0.198900 0.800157 0.693696 0.000561 0.000561 0.305183 0.866253 0.000561 0.000561 0.132625 MOTIF 34-CAAGATGGCGGCBG STREME-34 letter-probability matrix: alength= 4 w= 14 nsites= 239 E= 1.8e+000 0.054081 0.644016 0.163014 0.138889 0.910808 0.014072 0.075007 0.000113 0.810669 0.061843 0.050279 0.077210 0.015532 0.127376 0.806866 0.050226 0.876201 0.027149 0.054133 0.042516 0.000113 0.031004 0.000165 0.968718 0.015532 0.051021 0.933334 0.000113 0.057936 0.011730 0.872399 0.057936 0.163617 0.711150 0.015585 0.109648 0.142742 0.046423 0.712750 0.098084 0.104194 0.054133 0.795302 0.046371 0.115759 0.728169 0.054133 0.101939 0.117358 0.225349 0.335626 0.321667 0.082665 0.104246 0.747443 0.065645 MOTIF 35-CCAAGGTCACABAG STREME-35 letter-probability matrix: alength= 4 w= 14 nsites= 107 E= 2.2e+000 0.027503 0.808420 0.009468 0.154609 0.000266 0.853816 0.136574 0.009345 0.890008 0.018547 0.063942 0.027503 0.826455 0.073021 0.091179 0.009345 0.000266 0.000389 0.999079 0.000266 0.200004 0.018547 0.654078 0.127371 0.009345 0.000389 0.054863 0.935403 0.000266 0.971843 0.027626 0.000266 0.799218 0.054863 0.127495 0.018424 0.091055 0.853816 0.000389 0.054740 0.735665 0.082100 0.154732 0.027503 0.081976 0.263682 0.399865 0.254477 0.599480 0.272759 0.082100 0.045661 0.209082 0.027626 0.654078 0.109213 MOTIF 36-GGCTCACTGCA STREME-36 letter-probability matrix: alength= 4 w= 11 nsites= 56 E= 2.3e+000 0.267615 0.009403 0.716231 0.006751 0.000601 0.000880 0.936313 0.062206 0.000601 0.977384 0.000880 0.021135 0.000601 0.000880 0.041949 0.956569 0.000601 0.989396 0.000880 0.009123 0.977104 0.000880 0.021414 0.000601 0.009123 0.907257 0.062485 0.021135 0.000601 0.000880 0.041949 0.956569 0.021135 0.000880 0.977384 0.000601 0.000601 0.956849 0.000880 0.041670 0.997638 0.000880 0.000880 0.000601 MOTIF 37-TGCGCATGCGCA STREME-37 letter-probability matrix: alength= 4 w= 12 nsites= 112 E= 4.2e+000 0.023777 0.208487 0.181678 0.586057 0.064788 0.012220 0.922650 0.000343 0.053071 0.946083 0.000502 0.000343 0.000343 0.000502 0.998812 0.000343 0.000343 0.998812 0.000502 0.000343 0.705108 0.128675 0.124864 0.041354 0.041354 0.124864 0.128675 0.705108 0.000343 0.000502 0.998812 0.000343 0.000343 0.998812 0.000502 0.000343 0.000343 0.000502 0.946083 0.053071 0.000343 0.922650 0.012220 0.064788 0.586057 0.181678 0.208487 0.023777 ******************************************************************************** Stopped because 3 consecutive motifs exceeded the p-value threshold (0.05). ******************************************************************************** COMMAND: streme --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out -dna --p /scratch/jngalang/MotifAnalysis/NewMemeChip/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/seqs-centered --minw 6 --maxw 15 --order 2 ******************************************************************************** CPU: cn45 ******************************************************************************** FINALTIME: 1742.04 seconds ********************************************************************************