prim_db prim_id prim_alt prim_cons sec_db sec_id sec_alt sec_cons trim_left trim_right red_db red_id red_alt E-value gap orient count total adj_p-value p-value streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml GGATTACAGGCRTGMGCCAC MEME-3 GGATTACAGGCRTGMGCCAC 0 0 . . . 9.81e-10 4 0 9 71 2.50e-15 2.25e-14 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml GGATTACAGGCRTGMGCCAC MEME-3 GGATTACAGGCRTGMGCCAC 0 0 . . . 9.81e-10 4 4 9 71 1.15e-12 1.03e-11 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml GGATTACAGGCRTGMGCCAC MEME-3 GGATTACAGGCRTGMGCCAC 0 0 . . . 9.81e-10 4 5 9 71 1.15e-12 1.03e-11 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml GGATTACAGGCRTGMGCCAC MEME-3 GGATTACAGGCRTGMGCCAC 0 0 . . . 9.81e-10 4 8 9 71 4.75e-10 4.28e-09 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 10-GCRTGAGCCAC STREME-10 GCRTGAGCCAC 0 0 streme.xml GGATTACAGGCRTGMGCCAC MEME-3 8.76e-08 4 0 9 122 2.09e-13 1.88e-12 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 10-GCRTGAGCCAC STREME-10 GCRTGAGCCAC 0 0 streme.xml GGATTACAGGCRTGMGCCAC MEME-3 8.76e-08 4 4 9 122 8.91e-11 8.02e-10 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 10-GCRTGAGCCAC STREME-10 GCRTGAGCCAC 0 0 streme.xml GGATTACAGGCRTGMGCCAC MEME-3 8.76e-08 4 5 9 122 8.91e-11 8.02e-10 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 10-GCRTGAGCCAC STREME-10 GCRTGAGCCAC 0 0 streme.xml GGATTACAGGCRTGMGCCAC MEME-3 8.76e-08 4 8 9 122 3.17e-08 2.86e-07 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 17-AATCCCAGCACT STREME-17 AATCCCAGCACT 0 0 streme.xml GGATTACAGGCRTGMGCCAC MEME-3 5.50e-05 19 1 7 105 1.32e-10 1.19e-09 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 17-AATCCCAGCACT STREME-17 AATCCCAGCACT 0 0 streme.xml GGATTACAGGCRTGMGCCAC MEME-3 5.50e-05 19 4 7 105 1.45e-08 1.30e-07 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 17-AATCCCAGCACT STREME-17 AATCCCAGCACT 0 0 streme.xml GGATTACAGGCRTGMGCCAC MEME-3 5.50e-05 19 6 7 105 1.45e-08 1.30e-07 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 17-AATCCCAGCACT STREME-17 AATCCCAGCACT 0 0 streme.xml GGATTACAGGCRTGMGCCAC MEME-3 5.50e-05 19 8 7 105 1.36e-06 1.23e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 1-CTGTAATCCCAGCW STREME-1 CTGTAATCCCAGCW 0 0 streme.xml GGATTACAGGCRTGMGCCAC MEME-3 4.25e-04 15 1 7 139 1.03e-09 9.31e-09 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 1-CTGTAATCCCAGCW STREME-1 CTGTAATCCCAGCW 0 0 streme.xml GGATTACAGGCRTGMGCCAC MEME-3 4.25e-04 15 4 7 139 1.07e-07 9.66e-07 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 1-CTGTAATCCCAGCW STREME-1 CTGTAATCCCAGCW 0 0 streme.xml GGATTACAGGCRTGMGCCAC MEME-3 4.25e-04 15 6 7 139 1.07e-07 9.66e-07 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 26-CTGTARTCC STREME-26 CTGTARTCC 0 0 streme.xml GGATTACAGGCRTGMGCCAC MEME-3 5.86e-03 15 1 7 210 1.38e-08 1.24e-07 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 26-CTGTARTCC STREME-26 CTGTARTCC 0 0 streme.xml GGATTACAGGCRTGMGCCAC MEME-3 5.86e-03 15 4 7 210 1.29e-06 1.16e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 26-CTGTARTCC STREME-26 CTGTARTCC 0 0 streme.xml GGATTACAGGCRTGMGCCAC MEME-3 5.86e-03 15 6 7 210 1.29e-06 1.16e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml CCTCRGCCTCCCRARKWGCT MEME-2 CCTCRGCCTCCCRARKWGCT 0 0 . . . 1.10e-08 25 0 9 92 2.81e-14 2.53e-13 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml CCTCRGCCTCCCRARKWGCT MEME-2 CCTCRGCCTCCCRARKWGCT 0 0 . . . 1.10e-08 25 4 9 92 1.25e-11 1.12e-10 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml CCTCRGCCTCCCRARKWGCT MEME-2 CCTCRGCCTCCCRARKWGCT 0 0 . . . 1.10e-08 25 5 9 92 1.25e-11 1.12e-10 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml CCTCRGCCTCCCRARKWGCT MEME-2 CCTCRGCCTCCCRARKWGCT 0 0 . . . 1.10e-08 25 8 9 92 4.80e-09 4.32e-08 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 2-GCCTCRGCCTCCCRA STREME-2 GCCTCRGCCTCCCRA 0 0 streme.xml CCTCRGCCTCCCRARKWGCT MEME-2 6.63e-03 31 0 9 428 1.63e-08 1.47e-07 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 2-GCCTCRGCCTCCCRA STREME-2 GCCTCRGCCTCCCRA 0 0 streme.xml CCTCRGCCTCCCRARKWGCT MEME-2 6.63e-03 31 5 10 428 6.38e-07 5.74e-06 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 2-GCCTCRGCCTCCCRA STREME-2 GCCTCRGCCTCCCRA 0 0 streme.xml CCTCRGCCTCCCRARKWGCT MEME-2 6.63e-03 31 4 9 428 4.19e-06 3.77e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml GGRGVHGGRGSCGGVG MEME-10 GGRGVHGGRGSCGGVG 0 0 . . . 3.32e-04 3 1 39 7163 8.19e-10 7.37e-09 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml GGRGVHGGRGSCGGVG MEME-10 GGRGVHGGRGSCGGVG 0 0 . . . 3.32e-04 9 3 34 7163 1.50e-07 1.35e-06 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml ATCRCTTGARSYCRGGAGKY MEME-5 ATCRCTTGARSYCRGGAGKY 0 0 . . . 1.22e-03 52 1 6 91 3.11e-09 2.80e-08 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml ATCRCTTGARSYCRGGAGKY MEME-5 ATCRCTTGARSYCRGGAGKY 0 0 . . . 1.22e-03 52 4 6 91 1.73e-07 1.56e-06 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml ATCRCTTGARSYCRGGAGKY MEME-5 ATCRCTTGARSYCRGGAGKY 0 0 . . . 1.22e-03 52 6 6 91 1.73e-07 1.56e-06 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 5-CAAGTGATYCTCCY STREME-5 CAAGTGATYCTCCY 0 0 streme.xml ATCRCTTGARSYCRGGAGKY MEME-5 2.24e-03 46 0 7 177 5.47e-09 4.92e-08 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 5-CAAGTGATYCTCCY STREME-5 CAAGTGATYCTCCY 0 0 streme.xml ATCRCTTGARSYCRGGAGKY MEME-5 2.24e-03 46 4 7 177 5.34e-07 4.81e-06 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 5-CAAGTGATYCTCCY STREME-5 CAAGTGATYCTCCY 0 0 streme.xml ATCRCTTGARSYCRGGAGKY MEME-5 2.24e-03 46 5 7 177 5.34e-07 4.81e-06 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 19-AGGTCAGGAGTTYGA STREME-19 AGGTCAGGAGTTYGA 0 0 streme.xml ATCRCTTGARSYCRGGAGKY MEME-5 1.03e-02 60 1 6 134 2.52e-08 2.26e-07 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 19-AGGTCAGGAGTTYGA STREME-19 AGGTCAGGAGTTYGA 0 0 streme.xml ATCRCTTGARSYCRGGAGKY MEME-5 1.03e-02 60 4 6 134 1.32e-06 1.19e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 19-AGGTCAGGAGTTYGA STREME-19 AGGTCAGGAGTTYGA 0 0 streme.xml ATCRCTTGARSYCRGGAGKY MEME-5 1.03e-02 60 6 6 134 1.32e-06 1.19e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml SSCGCCSCCGCCGCCGCCSC MEME-9 SSCGCCSCCGCCGCCGCCSC 0 0 . . . 4.13e-03 3 0 36 6761 1.05e-08 9.48e-08 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml SSCGCCSCCGCCGCCGCCSC MEME-9 SSCGCCSCCGCCGCCGCCSC 0 0 . . . 4.13e-03 10 0 32 6761 5.79e-07 5.21e-06 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml SSCGCCSCCGCCGCCGCCSC MEME-9 SSCGCCSCCGCCGCCGCCSC 0 0 . . . 4.13e-03 0 0 30 6761 3.61e-06 3.25e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 14-AGAYRGRGTYTCACY STREME-14 AGAYRGRGTYTCACY 0 0 . . . 2.15e-02 93 0 6 152 5.28e-08 4.75e-07 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 14-AGAYRGRGTYTCACY STREME-14 AGAYRGRGTYTCACY 0 0 . . . 2.15e-02 93 4 6 152 2.69e-06 2.42e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 14-AGAYRGRGTYTCACY STREME-14 AGAYRGRGTYTCACY 0 0 . . . 2.15e-02 93 5 6 152 2.69e-06 2.42e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 4-WTTTTTWKTWGAGACRGRGT STREME-4 WTTTTTWKTWGAGACRGRGT 0 0 streme.xml 14-AGAYRGRGTYTCACY STREME-14 4.68e-01 99 0 5 147 1.20e-06 1.08e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 4-WTTTTTWKTWGAGACRGRGT STREME-4 WTTTTTWKTWGAGACRGRGT 0 0 streme.xml 14-AGAYRGRGTYTCACY STREME-14 4.68e-01 99 4 6 147 2.74e-06 2.47e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml WCCAGCCTGGSCAACA MEME-4 WCCAGCCTGGSCAACA 0 0 . . . 1.04e-01 84 8 8 113 2.58e-07 2.33e-06 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml WCCAGCCTGGSCAACA MEME-4 WCCAGCCTGGSCAACA 0 0 . . . 1.04e-01 76 1 5 113 2.88e-07 2.59e-06 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml WCCAGCCTGGSCAACA MEME-4 WCCAGCCTGGSCAACA 0 0 . . . 1.04e-01 84 6 6 113 5.16e-07 4.65e-06 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC 0 0 . . . 1.99e-01 3 0 21 3663 4.69e-07 4.22e-06 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml ADARAAAMWKAAANAA MEME-7 ADARAAAMWKAAANAA 0 0 . . . 2.41e-01 128 0 24 4425 5.97e-07 5.37e-06 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml ADARAAAMWKAAANAA MEME-7 ADARAAAMWKAAANAA 0 0 . . . 2.41e-01 128 5 37 4425 8.84e-07 7.96e-06 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml ADARAAAMWKAAANAA MEME-7 ADARAAAMWKAAANAA 0 0 . . . 2.41e-01 131 8 58 4425 4.50e-06 4.05e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml ADARAAAMWKAAANAA MEME-7 ADARAAAMWKAAANAA 0 0 . . . 2.41e-01 131 6 35 4425 4.60e-06 4.14e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC meme.xml TTTTKTWTTTTTWKTWGAGA MEME-1 TTTTKTWTTTTTWKTWGAGA 0 0 meme.xml ADARAAAMWKAAANAA MEME-7 7.68e-01 129 8 51 3503 1.98e-06 1.78e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 18-CCCGGCCCGGCC STREME-18 CCCGGCCCGGCC 0 0 . . . 2.93e-01 6 2 28 5894 7.07e-07 6.36e-06 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 18-CCCGGCCCGGCC STREME-18 CCCGGCCCGGCC 0 0 . . . 2.93e-01 7 0 27 5894 1.91e-06 1.72e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 18-CCCGGCCCGGCC STREME-18 CCCGGCCCGGCC 0 0 . . . 2.93e-01 2 2 27 5894 1.91e-06 1.72e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 18-CCCGGCCCGGCC STREME-18 CCCGGCCCGGCC 0 0 . . . 2.93e-01 7 2 27 5894 1.91e-06 1.72e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 18-CCCGGCCCGGCC STREME-18 CCCGGCCCGGCC 0 0 . . . 2.93e-01 7 8 72 5894 2.24e-06 2.02e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 3-CAGCCTGGSCAACA STREME-3 CAGCCTGGSCAACA 0 0 . . . 3.41e-01 78 8 11 275 8.33e-07 7.50e-06 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 3-CAGCCTGGSCAACA STREME-3 CAGCCTGGSCAACA 0 0 . . . 3.41e-01 78 6 8 275 1.08e-06 9.72e-06 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 3-CAGCCTGGSCAACA STREME-3 CAGCCTGGSCAACA 0 0 . . . 3.41e-01 78 1 6 275 1.53e-06 1.38e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 22-AAAAASAAAARAAAA STREME-22 AAAAASAAAARAAAA 0 0 . . . 4.56e-01 135 4 27 2800 1.13e-06 1.01e-05 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 6-GGCGGCGGCGGCGGCG STREME-6 GGCGGCGGCGGCGGCG 0 0 . . . 3.79e+00 5 1 27 6323 1.19e-02 1.02e-01 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 7-AAAATTAGCCRGGCGT STREME-7 AAAATTAGCCRGGCGT 0 0 . . . 6.04e+00 122 1 3 54 1.96e-02 1.63e-01 streme.xml 12-CCCMGMCCC STREME-12 CCCMGMCCC streme.xml 9-CAGTGAGCCGAGATCG STREME-9 CAGTGAGCCGAGATCG 0 0 . . . 8.90e+00 105 5 4 79 3.01e-02 2.41e-01 # SpaMo (Spaced Motif Analysis Tool): Version 5.4.1 compiled on Aug 1 2022 at 17:19:41 # The format of this file is described at https://meme-suite.org/meme/doc/spamo-output-format.html. # spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background -keepprimary -primary 12-CCCMGMCCC /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml