Invoking:
  getsize /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta 1> $metrics
Finished invoke:
  name: count_seqs  status: 0  time: 0.049426
Invoking:
  fasta-most -min 50 < /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta 1> $metrics
Finished invoke:
  name: most_seqs  status: 0  time: 0.077715
Invoking:
  fasta-center -dna -len 100 < /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta 1> /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/seqs-centered
Finished invoke:
  name: center_seqs  status: 0  time: 0.096777
Invoking:
  fasta-get-markov -nostatus -nosummary -dna -m 2 /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background
Finished invoke:
  name: bg  status: 0  time: 0.043972
Invoking:
  meme /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/seqs-centered -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out -mod zoops -nmotifs 10 -minw 5 -maxw 20 -bfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background -dna -revcomp -nostatus
Finished invoke:
  name: meme  status: 0  time: 3404.19808
Invoking:
  streme --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out -dna --p /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/seqs-centered --minw 5 --maxw 20 --order 2
Finished invoke:
  name: streme  status: 0  time: 427.376014
Invoking:
  centrimo -seqlen 360 -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/centrimo_out -bfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml
Finished invoke:
  name: centrimo  status: 256  time: 0.063011
Invoking:
  tomtom -verbosity 1 -text -thresh 0.1 /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/combined.meme /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/combined.meme 1> /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/motif_alignment.txt
Finished invoke:
  name: align  status: 0  time: 1.829113
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background -keepprimary -primary TTTTKTWTTTTTWKTWGAGA /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 6.435866
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background -keepprimary -primary CCTCRGCCTCCCRARKWGCT /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 2.254082
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background -keepprimary -primary GGATTACAGGCRTGMGCCAC /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 2.267201
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background -keepprimary -primary ATCRCTTGARSYCRGGAGKY /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 2.205745
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background -keepprimary -primary WCCAGCCTGGSCAACA /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 2.258281
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background -keepprimary -primary CRCGATCTCGGCTCACTGCA /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 1.479849
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background -keepprimary -primary SSCGCCSCCGCCGCCGCCSC /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 7.232615
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background -keepprimary -primary 7-AAAATTAGCCRGGCGT /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 1.116466
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background -keepprimary -primary 8-GAGTGCAGTGGCR /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 2.107753
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background -keepprimary -primary 11-CAAGATGGYGA /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 5.803152
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background -keepprimary -primary 12-CCCMGMCCC /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 7.897926
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/fimo_out_1 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background --motif TTTTKTWTTTTTWKTWGAGA /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta
Finished invoke:
  name: fimo1  status: 0  time: 1.791093
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/fimo_out_2 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background --motif CCTCRGCCTCCCRARKWGCT /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta
Finished invoke:
  name: fimo2  status: 0  time: 1.458973
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/fimo_out_3 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background --motif GGATTACAGGCRTGMGCCAC /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta
Finished invoke:
  name: fimo3  status: 0  time: 1.454312
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/fimo_out_4 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background --motif ATCRCTTGARSYCRGGAGKY /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta
Finished invoke:
  name: fimo4  status: 0  time: 1.462849
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/fimo_out_5 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background --motif WCCAGCCTGGSCAACA /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta
Finished invoke:
  name: fimo5  status: 0  time: 1.392856
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/fimo_out_6 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background --motif CRCGATCTCGGCTCACTGCA /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta
Finished invoke:
  name: fimo6  status: 0  time: 1.46144
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/fimo_out_7 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background --motif SSCGCCSCCGCCGCCGCCSC /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta
Finished invoke:
  name: fimo7  status: 0  time: 1.521823
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/fimo_out_8 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background --motif 7-AAAATTAGCCRGGCGT /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta
Finished invoke:
  name: fimo8  status: 0  time: 1.357178
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/fimo_out_9 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background --motif 8-GAGTGCAGTGGCR /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta
Finished invoke:
  name: fimo9  status: 0  time: 1.309624
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/fimo_out_10 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background --motif 11-CAAGATGGYGA /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta
Finished invoke:
  name: fimo10  status: 0  time: 1.28018
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/fimo_out_11 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/background --motif 12-CCCMGMCCC /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/streme_out/streme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta
Finished invoke:
  name: fimo11  status: 0  time: 1.26899
Writing output
Invoking:
  meme-chip_html_to_tsv /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/meme-chip.html /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/summary.tsv "meme-chip /scratch/jngalang/MotifAnalysis/PeakFiles/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks.fasta -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks -meme-nmotifs 10 -minw 5 -maxw 20" 5.4.1 "Sat Aug 21 19\:23\:23 2021 -0700"
Finished invoke:
  name: summary  status: 0  time: 0.082044
Done