Query_ID Target_ID Optimal_offset p-value E-value q-value Overlap Query_consensus Target_consensus Orientation 1 1 0 0 0 0 20 TTTTTTTTTTTTTTTAGAGA TTTTTTTTTTTTTTTAGAGA + 1 8 0 3.10958e-08 7.15204e-07 7.15204e-07 16 TTTTTTTTTTTTTTTAGAGA TTTTTTCTTTTTTTTT - 1 14 -6 1.61006e-07 3.70313e-06 2.46875e-06 14 TTTTTTTTTTTTTTTAGAGA ATTTTTAGTAGAGACGGGGT + 2 2 0 0 0 0 20 CCTCAGCCTCCCAAGTAGCT CCTCAGCCTCCCAAGTAGCT + 2 12 1 1.08075e-10 2.48573e-09 2.48573e-09 14 CCTCAGCCTCCCAAGTAGCT GCCTCAGCCTCCCAA + 2 23 3 0.000590165 0.0135738 0.00904919 17 CCTCAGCCTCCCAAGTAGCT CAACCTCCGCCTCCCGGGTT - 3 3 0 7.9874e-44 1.8371e-42 3.6742e-42 20 GGATTACAGGCGTGAGCCAC GGATTACAGGCGTGAGCCAC + 3 20 -9 7.81321e-06 0.000179704 0.000179704 11 GGATTACAGGCGTGAGCCAC GCGTGAGCCAC + 3 11 5 3.27137e-05 0.000752416 0.000501611 9 GGATTACAGGCGTGAGCCAC TGCTGGGATTACAG - 4 4 0 0 0 0 20 ATCACTTGAGCCCAGGAGTT ATCACTTGAGCCCAGGAGTT + 4 15 6 0.00191653 0.0440803 0.0440803 8 ATCACTTGAGCCCAGGAGTT AGGAGGATCACTTG - 4 9 1 0.00525046 0.120761 0.0805071 19 ATCACTTGAGCCCAGGAGTT GATCTCCTGACCTCGTGATC - 5 5 0 4.1202e-37 9.47647e-36 1.89529e-35 16 ACCAGCCTGGGCAACA ACCAGCCTGGGCAACA + 5 13 -2 1.22547e-16 2.81857e-15 2.81857e-15 14 ACCAGCCTGGGCAACA CAGCCTGGGCAACA + 6 6 0 0 0 0 20 CGCGATCTCGGCTCACTGCA CGCGATCTCGGCTCACTGCA + 6 19 -2 1.23429e-13 2.83886e-12 2.83886e-12 16 CGCGATCTCGGCTCACTGCA CGATCTCGGCTCACTG - 7 7 0 0 0 0 20 GCCGCCGCCGCCGCCGCCGC GCCGCCGCCGCCGCCGCCGC + 7 16 -2 1.12271e-11 2.58224e-10 2.58224e-10 16 GCCGCCGCCGCCGCCGCCGC CGCCGCCGCCGCCGCC - 7 10 -2 6.88497e-05 0.00158354 0.0010557 16 GCCGCCGCCGCCGCCGCCGC CCCCGCCCCCTGCCCC - 8 8 0 0 0 0 16 AAAAAAAAAGAAAAAA AAAAAAAAAGAAAAAA + 8 1 4 4.33914e-09 9.98002e-08 9.98002e-08 16 AAAAAAAAAGAAAAAA TCTCTAAAAAAAAAAAAAAA - 9 9 0 6.22177e-43 1.43101e-41 2.86201e-41 20 GATCACGAGGTCAGGAGATC GATCACGAGGTCAGGAGATC + 9 4 1 0.00225992 0.0519782 0.0519782 19 GATCACGAGGTCAGGAGATC AACTCCTGGGCTCAAGTGAT - 10 10 0 4.12865e-41 9.49589e-40 1.89918e-39 16 GGGGCAGGGGGCGGGG GGGGCAGGGGGCGGGG + 10 16 0 8.4432e-06 0.000194194 0.000194194 16 GGGGCAGGGGGCGGGG GGCGGCGGCGGCGGCG + 10 7 -1 1.56864e-05 0.000360788 0.000240525 15 GGGGCAGGGGGCGGGG GCGGCGGCGGCGGCGGCGGC - 10 22 -1 0.00347602 0.0799485 0.0399742 9 GGGGCAGGGGGCGGGG GGGGCGGGG - 10 23 6 0.0100094 0.230217 0.0920867 14 GGGGCAGGGGGCGGGG AACCCGGGAGGCGGAGGTTG + 11 11 0 1.6024e-29 3.68551e-28 7.37102e-28 14 CTGTAATCCCAGCA CTGTAATCCCAGCA + 11 3 11 0.000519836 0.0119562 0.0119562 9 CTGTAATCCCAGCA GTGGCTCACGCCTGTAATCC - 12 12 0 9.8498e-37 2.26545e-35 4.53091e-35 15 GCCTCAGCCTCCCAA GCCTCAGCCTCCCAA + 12 2 -1 5.41136e-10 1.24461e-08 1.24461e-08 14 GCCTCAGCCTCCCAA CCTCAGCCTCCCAAGTAGCT + 12 23 2 1.36985e-05 0.000315066 0.000210044 15 GCCTCAGCCTCCCAA CAACCTCCGCCTCCCGGGTT - 12 7 6 0.00751129 0.17276 0.0803951 14 GCCTCAGCCTCCCAA GCCGCCGCCGCCGCCGCCGC + 12 16 4 0.0087386 0.200988 0.0803951 12 GCCTCAGCCTCCCAA CGCCGCCGCCGCCGCC - 13 13 0 1.21997e-33 2.80593e-32 5.61185e-32 14 CAGCCTGGGCAACA CAGCCTGGGCAACA + 13 5 2 2.81955e-16 6.48496e-15 6.48496e-15 14 CAGCCTGGGCAACA ACCAGCCTGGGCAACA + 14 14 0 0 0 0 20 ATTTTTAGTAGAGACGGGGT ATTTTTAGTAGAGACGGGGT + 14 1 6 6.19754e-06 0.000142543 0.000142543 14 ATTTTTAGTAGAGACGGGGT TTTTTTTTTTTTTTTAGAGA + 15 15 0 2.64062e-35 6.07343e-34 1.21469e-33 14 CAAGTGATCCTCCT CAAGTGATCCTCCT + 15 4 12 0.00423203 0.0973367 0.0973367 8 CAAGTGATCCTCCT AACTCCTGGGCTCAAGTGAT - 16 16 0 3.37713e-43 7.7674e-42 1.55348e-41 16 GGCGGCGGCGGCGGCG GGCGGCGGCGGCGGCG + 16 7 2 1.92237e-09 4.42146e-08 4.42146e-08 16 GGCGGCGGCGGCGGCG GCGGCGGCGGCGGCGGCGGC - 16 10 0 0.000110087 0.00253199 0.00168799 16 GGCGGCGGCGGCGGCG GGGGCAGGGGGCGGGG + 17 17 0 5.1216e-35 1.17797e-33 2.35594e-33 16 AAAATTAGCCGGGCGT AAAATTAGCCGGGCGT + 18 18 0 1.23704e-31 2.84519e-30 5.69038e-30 13 GAGTGCAGTGGCG GAGTGCAGTGGCG + 19 19 0 4.48906e-39 1.03248e-37 2.06497e-37 16 CAGTGAGCCGAGATCG CAGTGAGCCGAGATCG + 19 6 2 1.45521e-17 3.34697e-16 3.34697e-16 16 CAGTGAGCCGAGATCG TGCAGTGAGCCGAGATCGCG - 20 20 0 2.7455e-24 6.31465e-23 1.26293e-22 11 GCGTGAGCCAC GCGTGAGCCAC + 20 3 9 6.33827e-07 1.4578e-05 1.4578e-05 11 GCGTGAGCCAC GGATTACAGGCGTGAGCCAC + 21 21 0 2.67976e-30 6.16346e-29 1.23269e-28 11 CAAGATGGCGA CAAGATGGCGA + 22 22 0 1.30004e-23 2.9901e-22 5.9802e-22 9 CCCCGCCCC CCCCGCCCC + 23 23 0 0 0 0 20 AACCCGGGAGGCGGAGGTTG AACCCGGGAGGCGGAGGTTG + 23 12 -3 5.5364e-05 0.00127337 0.00127337 15 AACCCGGGAGGCGGAGGTTG TTGGGAGGCTGAGGC - 23 2 3 0.000865687 0.0199108 0.0132739 17 AACCCGGGAGGCGGAGGTTG AGCTACTTGGGAGGCTGAGG - # Tomtom (Motif Comparison Tool): Version 5.4.1 compiled on Aug 1 2022 at 17:19:44 # The format of this file is described at https://meme-suite.org/meme/doc/tomtom-output-format.html. # tomtom -verbosity 1 -text -thresh 0.1 /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/combined.meme /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_LPS_TRIM1_8_peaks/combined.meme