******************************************************************************** STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation ******************************************************************************** MEME version 5.4.1 (Release date: Sat Aug 21 19:23:23 2021 -0700) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey, "STREME: accurate and versatile sequence motif discovery", Bioinformatics, Mar. 24, 2021. ******************************************************************************** ALPHABET= ACGT strands: + - Background letter frequencies A 0.214 C 0.286 G 0.286 T 0.214 MOTIF 1-CTCRGCCTCCYRA STREME-1 letter-probability matrix: alength= 4 w= 13 nsites= 1599 E= 1.4e-040 0.000021 0.965397 0.002358 0.032224 0.000021 0.001393 0.002757 0.995829 0.004797 0.802176 0.000994 0.192033 0.532860 0.005487 0.417295 0.044358 0.278046 0.004804 0.714400 0.002750 0.212406 0.729152 0.004805 0.053638 0.000703 0.966894 0.000710 0.031692 0.000021 0.000028 0.000028 0.999923 0.004115 0.962117 0.000028 0.033740 0.003716 0.964023 0.003440 0.028821 0.025269 0.594032 0.005088 0.375612 0.477205 0.020100 0.492438 0.010257 0.853328 0.013205 0.132763 0.000703 MOTIF 2-CCTGTAATCCCAGCWM STREME-2 letter-probability matrix: alength= 4 w= 16 nsites= 1281 E= 5.4e-038 0.010498 0.937952 0.016616 0.034933 0.002645 0.945805 0.007890 0.043661 0.007008 0.014871 0.004399 0.973722 0.089917 0.007017 0.900421 0.002645 0.003517 0.015743 0.006144 0.974595 0.961499 0.005272 0.025348 0.007881 0.770233 0.006144 0.219232 0.004390 0.000900 0.027089 0.002654 0.969357 0.007880 0.937951 0.008762 0.045406 0.007881 0.924861 0.008762 0.058496 0.001772 0.936202 0.003527 0.058499 0.972850 0.002654 0.014871 0.009626 0.062860 0.013998 0.917006 0.006135 0.013116 0.936208 0.010508 0.040168 0.491367 0.007017 0.007017 0.494599 0.478891 0.466939 0.017489 0.036681 MOTIF 3-WCCAGCCTGGSCAACAKRG STREME-3 letter-probability matrix: alength= 4 w= 19 nsites= 1240 E= 3.5e-035 0.608634 0.010852 0.015357 0.365157 0.009040 0.935022 0.019863 0.036076 0.010842 0.940428 0.000938 0.047792 0.985479 0.000037 0.006345 0.008138 0.027063 0.011752 0.876434 0.084750 0.009941 0.944935 0.012654 0.032470 0.011743 0.944033 0.000037 0.044186 0.008138 0.006345 0.003642 0.981874 0.037877 0.005444 0.945836 0.010842 0.101876 0.005444 0.884541 0.008138 0.045087 0.438311 0.502156 0.014447 0.024360 0.747474 0.007247 0.220919 0.759159 0.003642 0.228159 0.009040 0.963851 0.003642 0.027073 0.005435 0.018953 0.886354 0.023468 0.071225 0.942222 0.009950 0.042393 0.005435 0.089250 0.093770 0.312892 0.504087 0.457978 0.004543 0.527539 0.009941 0.095559 0.010851 0.877340 0.016249 MOTIF 4-GGAGRATCRCTTGAR STREME-4 letter-probability matrix: alength= 4 w= 15 nsites= 1076 E= 3.0e-034 0.077483 0.020976 0.882670 0.018871 0.072249 0.010509 0.917210 0.000032 0.626143 0.179043 0.013649 0.181165 0.142396 0.006323 0.834503 0.016778 0.434585 0.004230 0.554874 0.006312 0.967437 0.008416 0.022022 0.002125 0.005265 0.022022 0.001090 0.971623 0.016778 0.705711 0.050289 0.227222 0.520359 0.020975 0.433515 0.025151 0.005265 0.946516 0.012602 0.035616 0.013639 0.223045 0.028310 0.735006 0.001079 0.004230 0.003183 0.991509 0.028290 0.009463 0.953842 0.008405 0.988369 0.000043 0.009462 0.002125 0.436676 0.005276 0.555923 0.002125 MOTIF 5-WTTTTTWKTAGAGAYRGGG STREME-5 letter-probability matrix: alength= 4 w= 19 nsites= 1148 E= 2.2e-029 0.542789 0.013482 0.025965 0.417763 0.061483 0.013483 0.019244 0.905791 0.033637 0.012522 0.025965 0.927876 0.025955 0.019244 0.000040 0.954761 0.020194 0.005801 0.018284 0.955722 0.015393 0.026925 0.018284 0.939398 0.482295 0.015403 0.049970 0.452331 0.044199 0.010602 0.599453 0.345746 0.010592 0.020204 0.011562 0.957642 0.660896 0.009642 0.040369 0.289094 0.039399 0.016363 0.920203 0.024035 0.973966 0.004841 0.014443 0.006751 0.041319 0.013482 0.933647 0.011552 0.957642 0.005801 0.029806 0.006751 0.018274 0.623401 0.012522 0.345803 0.385129 0.008681 0.592718 0.013472 0.104693 0.007721 0.872193 0.015393 0.294854 0.004841 0.681071 0.019234 0.051881 0.011562 0.899079 0.037478 MOTIF 6-AAAATTAGCYRGGCRTGGTG STREME-6 letter-probability matrix: alength= 4 w= 20 nsites= 1022 E= 4.0e-025 0.869807 0.034443 0.057018 0.038732 0.837558 0.043043 0.054868 0.064531 0.820359 0.046268 0.041968 0.091405 0.790260 0.057018 0.051643 0.101080 0.068831 0.068842 0.051643 0.810684 0.104305 0.073142 0.058093 0.764461 0.746186 0.006494 0.235462 0.011858 0.024757 0.016169 0.930016 0.029057 0.006483 0.952591 0.007569 0.033357 0.019383 0.573071 0.004344 0.403202 0.353745 0.011869 0.608554 0.025833 0.063457 0.003269 0.924641 0.008633 0.039807 0.009719 0.945066 0.005408 0.012933 0.666620 0.012944 0.307503 0.384916 0.017244 0.579532 0.018308 0.009708 0.168814 0.007569 0.813909 0.120429 0.007569 0.868743 0.003258 0.044107 0.011869 0.927866 0.016158 0.012933 0.025844 0.014019 0.947205 0.045182 0.007569 0.934316 0.012933 MOTIF 7-GTTGCAGTGAGCYRAGAT STREME-7 letter-probability matrix: alength= 4 w= 18 nsites= 569 E= 1.7e-016 0.045304 0.100855 0.831158 0.022683 0.014458 0.195442 0.014479 0.775621 0.002120 0.012423 0.004198 0.981260 0.074092 0.004198 0.915478 0.006232 0.002120 0.929872 0.002141 0.065867 0.915456 0.010367 0.061776 0.012401 0.035021 0.002141 0.960718 0.002120 0.004176 0.016536 0.018592 0.960697 0.028852 0.006254 0.956606 0.008289 0.975091 0.004198 0.010367 0.010345 0.051472 0.012423 0.929873 0.006232 0.004176 0.954549 0.000085 0.041190 0.035022 0.582219 0.030930 0.351829 0.343535 0.012423 0.635754 0.008289 0.812637 0.004198 0.016536 0.166630 0.022683 0.012423 0.954549 0.010345 0.960696 0.000085 0.020648 0.018570 0.002120 0.065888 0.006254 0.925739 MOTIF 8-GTGCAGTGGCRCR STREME-8 letter-probability matrix: alength= 4 w= 13 nsites= 510 E= 4.6e-012 0.017398 0.000102 0.979949 0.002551 0.002551 0.000102 0.005051 0.992296 0.023374 0.003604 0.972946 0.000076 0.009975 0.981396 0.000102 0.008527 0.989821 0.000102 0.010000 0.000076 0.134744 0.012475 0.847756 0.005025 0.000076 0.002577 0.000102 0.997245 0.017398 0.000102 0.979949 0.002551 0.029771 0.000102 0.962627 0.007500 0.000076 0.801259 0.000102 0.198562 0.452216 0.007526 0.463455 0.076803 0.012450 0.712632 0.002577 0.272342 0.327428 0.069872 0.591699 0.011001 MOTIF 9-CGTGAGCCACCRYGCCC STREME-9 letter-probability matrix: alength= 4 w= 17 nsites= 335 E= 7.0e-008 0.023582 0.724622 0.020263 0.231533 0.315384 0.010201 0.660896 0.013520 0.010165 0.003493 0.006847 0.979495 0.047060 0.023617 0.912450 0.016874 0.942601 0.020263 0.013555 0.023582 0.060476 0.020263 0.919158 0.000103 0.000103 0.972822 0.003493 0.023582 0.006811 0.969468 0.006847 0.016874 0.952663 0.000139 0.037033 0.010165 0.006811 0.935928 0.006847 0.050414 0.036998 0.657540 0.040387 0.265075 0.322093 0.016909 0.610584 0.050414 0.033644 0.566979 0.023617 0.375760 0.208055 0.026971 0.711207 0.053768 0.016874 0.905742 0.030325 0.047060 0.013520 0.909096 0.023617 0.053768 0.057122 0.634063 0.020263 0.288552 MOTIF 10-CTCCGCCTCC STREME-10 letter-probability matrix: alength= 4 w= 10 nsites= 2131 E= 7.6e-006 0.011148 0.962381 0.000295 0.026176 0.021340 0.029310 0.237273 0.712077 0.016182 0.974682 0.003170 0.005967 0.136016 0.602007 0.106679 0.155298 0.196925 0.002854 0.750759 0.049462 0.011456 0.861885 0.042248 0.084410 0.015812 0.906117 0.030506 0.047564 0.026258 0.000074 0.152673 0.820995 0.004807 0.969857 0.001320 0.024016 0.000529 0.978248 0.019468 0.001755 MOTIF 11-CCCCDCCCCCR STREME-11 letter-probability matrix: alength= 4 w= 11 nsites= 1544 E= 2.9e-005 0.014409 0.976636 0.000079 0.008875 0.023982 0.945217 0.030741 0.000059 0.000059 0.999802 0.000079 0.000059 0.038241 0.705677 0.131660 0.124421 0.401387 0.000079 0.221745 0.376789 0.065677 0.636150 0.170926 0.127247 0.049086 0.911598 0.039257 0.000059 0.012225 0.987636 0.000079 0.000059 0.000059 0.999802 0.000079 0.000059 0.160394 0.686196 0.104754 0.048657 0.595859 0.000079 0.404002 0.000059 MOTIF 12-GAGACRGRGTYTCR STREME-12 letter-probability matrix: alength= 4 w= 14 nsites= 212 E= 4.2e-003 0.052861 0.026567 0.920410 0.000162 0.978323 0.005487 0.005487 0.010702 0.000162 0.026567 0.957299 0.015972 0.936164 0.000218 0.063456 0.000162 0.000162 0.712691 0.000218 0.286929 0.443851 0.000218 0.524149 0.031782 0.142448 0.000218 0.841363 0.015972 0.442839 0.010757 0.546241 0.000162 0.047591 0.000218 0.912953 0.039238 0.000162 0.000218 0.000218 0.999402 0.005432 0.513589 0.005487 0.475492 0.000162 0.000218 0.000218 0.999402 0.000162 0.777106 0.000218 0.222514 0.597874 0.031837 0.322699 0.047591 MOTIF 13-CCTCGTGATCCRCC STREME-13 letter-probability matrix: alength= 4 w= 14 nsites= 173 E= 3.5e-002 0.006396 0.974542 0.000256 0.018805 0.018805 0.924904 0.012666 0.043625 0.000191 0.000256 0.012666 0.986887 0.031215 0.720119 0.000256 0.248410 0.217370 0.012666 0.769773 0.000191 0.000191 0.025075 0.012666 0.962068 0.012601 0.000256 0.980747 0.006396 0.962068 0.006461 0.025075 0.006396 0.000191 0.025075 0.000256 0.974477 0.012601 0.937314 0.031280 0.018805 0.012601 0.732534 0.006461 0.248404 0.335301 0.012666 0.651842 0.000191 0.018805 0.931109 0.000256 0.049829 0.000191 0.949723 0.006461 0.043624 MOTIF 14-AATAAATAAATAAATAA STREME-14 letter-probability matrix: alength= 4 w= 17 nsites= 154 E= 4.5e-002 0.906880 0.013468 0.026664 0.052987 0.860694 0.033262 0.039860 0.066183 0.082117 0.112443 0.072850 0.732590 0.910740 0.020066 0.033262 0.035932 0.873890 0.053056 0.020066 0.052987 0.880488 0.026664 0.046458 0.046389 0.092578 0.092649 0.033262 0.781511 0.801312 0.020066 0.119036 0.059585 0.794712 0.053056 0.033262 0.118970 0.840900 0.053056 0.072850 0.033193 0.125567 0.145432 0.066252 0.662748 0.807910 0.026664 0.112438 0.052987 0.827704 0.033262 0.053056 0.085977 0.867292 0.026664 0.053056 0.052987 0.085977 0.119041 0.072850 0.722132 0.755126 0.059654 0.105840 0.079379 0.814508 0.072850 0.033262 0.079379 MOTIF 15-GTAGCTGGGAC STREME-15 letter-probability matrix: alength= 4 w= 11 nsites= 68 E= 1.5e-001 0.000539 0.000722 0.998199 0.000539 0.000539 0.000722 0.000722 0.998016 0.998016 0.000722 0.000722 0.000539 0.070492 0.018210 0.910759 0.000539 0.000539 0.875778 0.018210 0.105472 0.000539 0.000722 0.000722 0.998016 0.060264 0.000722 0.913729 0.025285 0.053004 0.000722 0.893270 0.053004 0.000539 0.000722 0.945735 0.053004 0.998016 0.000722 0.000722 0.000539 0.000539 0.693598 0.000722 0.305140 MOTIF 16-CATTTC STREME-16 letter-probability matrix: alength= 4 w= 6 nsites= 1433 E= 1.8e-001 0.019427 0.935118 0.026027 0.019427 0.928518 0.026027 0.026027 0.019427 0.019427 0.026027 0.026027 0.928518 0.019427 0.026027 0.026027 0.928518 0.019427 0.026027 0.026027 0.928518 0.019427 0.935118 0.026027 0.019427 MOTIF 17-AAAASAAAAGAAA STREME-17 letter-probability matrix: alength= 4 w= 13 nsites= 108 E= 2.3e-001 0.923278 0.010728 0.055374 0.010620 0.978227 0.021030 0.000426 0.000318 0.978227 0.000426 0.000426 0.020922 0.916408 0.000426 0.082849 0.000318 0.000318 0.450190 0.549175 0.000318 0.864897 0.010728 0.072543 0.051832 0.978227 0.000426 0.000426 0.020922 0.937012 0.062244 0.000426 0.000318 0.978227 0.000426 0.000426 0.020922 0.000318 0.314269 0.685096 0.000318 0.978227 0.021030 0.000426 0.000318 0.988529 0.000426 0.000426 0.010620 0.998831 0.000426 0.000426 0.000318 MOTIF 18-CCCGGCCCGG STREME-18 letter-probability matrix: alength= 4 w= 10 nsites= 485 E= 2.3e-001 0.006177 0.976980 0.011516 0.005328 0.057650 0.860321 0.006425 0.075605 0.025411 0.894169 0.027373 0.053048 0.024153 0.013137 0.919606 0.043105 0.085891 0.019573 0.836968 0.057567 0.000455 0.994719 0.000810 0.004017 0.057285 0.860337 0.012394 0.069984 0.021115 0.904104 0.024824 0.049957 0.023581 0.088898 0.875625 0.011896 0.032200 0.025834 0.872686 0.069280 MOTIF 19-GATTACAGGYRYGHGC STREME-19 letter-probability matrix: alength= 4 w= 16 nsites= 101 E= 3.0e-001 0.086218 0.000443 0.913007 0.000331 0.977310 0.000443 0.021915 0.000331 0.054010 0.279577 0.032651 0.633761 0.011067 0.054123 0.021915 0.912895 0.988046 0.011179 0.000443 0.000331 0.000331 0.837856 0.021915 0.139898 0.998782 0.000443 0.000443 0.000331 0.011067 0.000443 0.977423 0.011067 0.000331 0.011179 0.966687 0.021803 0.011067 0.601664 0.000443 0.386826 0.397560 0.032652 0.537250 0.032539 0.032539 0.365465 0.000443 0.601553 0.161370 0.150746 0.666081 0.021803 0.440514 0.268841 0.011179 0.279465 0.204313 0.000443 0.784176 0.011067 0.000331 0.998895 0.000443 0.000331 MOTIF 20-AATCCCAGCACT STREME-20 letter-probability matrix: alength= 4 w= 12 nsites= 54 E= 3.0e-001 0.954212 0.000895 0.022560 0.022333 0.997542 0.000895 0.000895 0.000668 0.000668 0.000895 0.000895 0.997542 0.000668 0.932771 0.000895 0.065667 0.022333 0.867772 0.000895 0.109000 0.000668 0.954439 0.000895 0.043999 0.997542 0.000895 0.000895 0.000668 0.022333 0.000895 0.976104 0.000668 0.000668 0.954438 0.000895 0.043999 0.954211 0.000895 0.044226 0.000668 0.000668 0.911106 0.044226 0.043999 0.000668 0.000895 0.000895 0.997542 MOTIF 21-SACGTS STREME-21 letter-probability matrix: alength= 4 w= 6 nsites= 767 E= 3.1e-001 0.007455 0.492545 0.492545 0.007455 0.972570 0.009987 0.009987 0.007455 0.007455 0.975103 0.009987 0.007455 0.007455 0.009987 0.975103 0.007455 0.007455 0.009987 0.009987 0.972570 0.007455 0.492545 0.492545 0.007455 MOTIF 22-CAAGATGGCG STREME-22 letter-probability matrix: alength= 4 w= 10 nsites= 127 E= 4.2e-001 0.000368 0.816694 0.087023 0.095915 0.899120 0.000493 0.100018 0.000368 0.957862 0.012435 0.000493 0.029210 0.000368 0.262562 0.716662 0.020408 0.978605 0.000493 0.000493 0.020408 0.000368 0.000493 0.000493 0.998645 0.000368 0.000493 0.998770 0.000368 0.005324 0.000493 0.988858 0.005324 0.000368 0.945513 0.033821 0.020298 0.099147 0.038020 0.820929 0.041903 MOTIF 23-TGGSCAACATGGTGAAA STREME-23 letter-probability matrix: alength= 4 w= 17 nsites= 104 E= 6.1e-001 0.000342 0.033737 0.000458 0.965463 0.022528 0.022644 0.932300 0.022528 0.089087 0.011551 0.899020 0.000342 0.033621 0.577322 0.377622 0.011435 0.033621 0.821365 0.000458 0.144555 0.954369 0.033737 0.000458 0.011435 0.954369 0.000458 0.022644 0.022528 0.000342 0.854648 0.033737 0.111272 0.954369 0.000458 0.044831 0.000342 0.000342 0.144669 0.100296 0.754693 0.255483 0.000458 0.721531 0.022528 0.055807 0.000458 0.899020 0.044714 0.022528 0.233413 0.022644 0.721415 0.155645 0.000458 0.843555 0.000342 0.932183 0.000458 0.055923 0.011435 0.710322 0.022644 0.255599 0.011435 0.943276 0.022644 0.011551 0.022528 MOTIF 24-AAATTAGCYGGG STREME-24 letter-probability matrix: alength= 4 w= 12 nsites= 69 E= 6.1e-001 0.982369 0.000654 0.016489 0.000488 0.966534 0.016489 0.016489 0.000488 0.966533 0.000654 0.032325 0.000488 0.000488 0.016489 0.016489 0.966534 0.000488 0.000654 0.000654 0.998204 0.998204 0.000654 0.000654 0.000488 0.016323 0.032325 0.950864 0.000488 0.016323 0.966700 0.016489 0.000488 0.016323 0.523281 0.016489 0.443907 0.190536 0.000654 0.776652 0.032158 0.127174 0.000654 0.840013 0.032159 0.032158 0.016489 0.919195 0.032158 MOTIF 25-CCSCGCCCCGCSCC STREME-25 letter-probability matrix: alength= 4 w= 14 nsites= 366 E= 6.6e-001 0.031687 0.836589 0.011595 0.120130 0.043524 0.956191 0.000163 0.000122 0.041216 0.611433 0.323556 0.023796 0.054691 0.945024 0.000163 0.000122 0.090201 0.000163 0.909514 0.000122 0.000122 0.938771 0.000163 0.060944 0.019850 0.777590 0.128140 0.074420 0.017542 0.927378 0.054959 0.000122 0.000122 0.944162 0.055595 0.000122 0.039668 0.008562 0.743783 0.207987 0.000122 0.952246 0.000163 0.047469 0.015904 0.348022 0.635952 0.000122 0.027071 0.763318 0.180233 0.029379 0.062917 0.652469 0.124661 0.159954 MOTIF 26-CTTGAACTCYTG STREME-26 letter-probability matrix: alength= 4 w= 12 nsites= 191 E= 6.8e-001 0.005884 0.935379 0.017359 0.041378 0.000176 0.008312 0.005943 0.985568 0.034422 0.097269 0.093941 0.774368 0.011592 0.021229 0.930388 0.036791 0.931830 0.005943 0.036851 0.025376 0.859995 0.008312 0.040192 0.091501 0.053915 0.861019 0.002605 0.082461 0.062961 0.076810 0.005943 0.854285 0.051547 0.815353 0.008312 0.124788 0.005884 0.558948 0.039220 0.395949 0.062963 0.028774 0.028775 0.879488 0.045838 0.011651 0.919505 0.023007 MOTIF 27-CCGGGGCTGC STREME-27 letter-probability matrix: alength= 4 w= 10 nsites= 328 E= 1.0e+000 0.006392 0.816748 0.119143 0.057718 0.000399 0.937522 0.061680 0.000399 0.000399 0.051459 0.947742 0.000399 0.082982 0.118033 0.796829 0.002156 0.014391 0.005431 0.966828 0.013349 0.033304 0.000535 0.933680 0.032481 0.023495 0.971466 0.000761 0.004278 0.000399 0.000535 0.000535 0.998531 0.062958 0.000535 0.919535 0.016972 0.017435 0.909155 0.000535 0.072875 MOTIF 28-AAGGAAG STREME-28 letter-probability matrix: alength= 4 w= 7 nsites= 4044 E= 1.2e+000 0.554929 0.207180 0.163306 0.074584 0.814679 0.000647 0.184192 0.000483 0.000483 0.011322 0.987713 0.000483 0.066321 0.047282 0.885914 0.000483 0.998224 0.000647 0.000647 0.000483 0.998224 0.000647 0.000647 0.000483 0.071202 0.000647 0.898165 0.029987 MOTIF 29-CAAGGTCACACAGCW STREME-29 letter-probability matrix: alength= 4 w= 15 nsites= 115 E= 1.2e+000 0.000266 0.912886 0.008979 0.077869 0.904174 0.069337 0.026224 0.000266 0.964532 0.017601 0.017601 0.000266 0.055580 0.000356 0.943798 0.000266 0.034756 0.000356 0.912886 0.052001 0.043379 0.103827 0.017601 0.835193 0.017511 0.935176 0.047048 0.000266 0.947286 0.000356 0.026224 0.026134 0.000266 0.921509 0.008979 0.069246 0.619628 0.121073 0.095204 0.164095 0.077869 0.654209 0.112450 0.155472 0.783457 0.000356 0.146940 0.069246 0.138227 0.060714 0.766302 0.034756 0.146850 0.633385 0.107406 0.112359 0.431395 0.107406 0.077960 0.383239 MOTIF 30-GCTCACTGCAAC STREME-30 letter-probability matrix: alength= 4 w= 12 nsites= 51 E= 1.2e+000 0.024917 0.025170 0.900824 0.049089 0.000745 0.924997 0.025170 0.049088 0.000745 0.000998 0.000998 0.997258 0.000745 0.997511 0.000998 0.000745 0.997258 0.000998 0.000998 0.000745 0.000745 0.973340 0.025170 0.000745 0.024917 0.000998 0.000998 0.973086 0.024917 0.000998 0.973340 0.000745 0.000745 0.973340 0.000998 0.024917 0.997258 0.000998 0.000998 0.000745 0.790792 0.000998 0.207465 0.000745 0.000745 0.884433 0.049342 0.065480 MOTIF 31-CCAGGCTGGAGTGCAGTG STREME-31 letter-probability matrix: alength= 4 w= 18 nsites= 39 E= 1.2e+000 0.000930 0.966722 0.001246 0.031101 0.061272 0.876209 0.001246 0.061272 0.936235 0.001246 0.031417 0.031101 0.000930 0.001246 0.966722 0.031101 0.031101 0.031417 0.936551 0.000930 0.031101 0.936551 0.001246 0.031101 0.031101 0.061588 0.091759 0.815551 0.061272 0.001246 0.936551 0.000930 0.031101 0.001246 0.936551 0.031101 0.966406 0.031417 0.001246 0.000930 0.061272 0.121930 0.815867 0.000930 0.000930 0.001246 0.031417 0.966406 0.031101 0.001246 0.876209 0.091443 0.000930 0.876209 0.001246 0.121614 0.815551 0.031417 0.121930 0.031101 0.061272 0.031417 0.906380 0.000930 0.091445 0.091759 0.001246 0.815550 0.091443 0.001246 0.906380 0.000930 MOTIF 32-CGGAAGTGAT STREME-32 letter-probability matrix: alength= 4 w= 10 nsites= 41 E= 1.2e+000 0.019427 0.935118 0.026027 0.019427 0.019427 0.026027 0.935118 0.019427 0.019427 0.026027 0.935118 0.019427 0.928518 0.026027 0.026027 0.019427 0.928518 0.026027 0.026027 0.019427 0.019427 0.026027 0.935118 0.019427 0.019427 0.026027 0.026027 0.928518 0.019427 0.026027 0.935118 0.019427 0.928518 0.026027 0.026027 0.019427 0.019427 0.026027 0.026027 0.928518 MOTIF 33-CRGCRGCAGCRGCAGCRGCR STREME-33 letter-probability matrix: alength= 4 w= 20 nsites= 178 E= 1.2e+000 0.000189 0.741928 0.178010 0.079873 0.570237 0.000253 0.331249 0.098262 0.000189 0.000253 0.968721 0.030837 0.000189 0.944203 0.000253 0.055355 0.484423 0.012512 0.410933 0.092132 0.055355 0.037030 0.889037 0.018578 0.000189 0.852260 0.147362 0.000189 0.705087 0.000253 0.147362 0.147298 0.086003 0.055419 0.840001 0.018578 0.000189 0.999369 0.000253 0.000189 0.588625 0.030901 0.337378 0.043096 0.073744 0.098326 0.827742 0.000189 0.006319 0.686762 0.276083 0.030837 0.576366 0.098326 0.245435 0.079873 0.000189 0.202528 0.797094 0.000189 0.000189 0.760317 0.239305 0.000189 0.374091 0.079937 0.435451 0.110521 0.067614 0.208658 0.686762 0.036966 0.000189 0.815483 0.159621 0.024707 0.306666 0.196399 0.398674 0.098262 MOTIF 34-CGGSGTCBCGG STREME-34 letter-probability matrix: alength= 4 w= 11 nsites= 1542 E= 1.5e+000 0.000045 0.862240 0.051723 0.085992 0.002538 0.000060 0.985501 0.011901 0.232059 0.001651 0.610917 0.155374 0.039450 0.324441 0.620089 0.016021 0.033696 0.041549 0.924171 0.000584 0.258122 0.000060 0.000060 0.741758 0.000045 0.946927 0.012564 0.040464 0.119331 0.255791 0.349113 0.275766 0.116706 0.620043 0.147720 0.115531 0.212408 0.194895 0.487747 0.104950 0.001500 0.015012 0.930414 0.053074 MOTIF 35-ACAGAGCGAGA STREME-35 letter-probability matrix: alength= 4 w= 11 nsites= 104 E= 1.5e+000 0.955909 0.000585 0.043070 0.000437 0.028759 0.927735 0.043070 0.000437 0.955911 0.014746 0.014746 0.014598 0.014598 0.014746 0.956059 0.014598 0.992516 0.000585 0.006462 0.000437 0.000437 0.000585 0.998542 0.000437 0.000437 0.762624 0.000585 0.236354 0.182183 0.045085 0.758134 0.014598 0.992516 0.000585 0.006462 0.000437 0.014598 0.028907 0.956058 0.000437 0.970072 0.014746 0.000585 0.014598 MOTIF 36-GCCTCAGTTTCCYCA STREME-36 letter-probability matrix: alength= 4 w= 15 nsites= 258 E= 1.7e+000 0.128994 0.016800 0.754312 0.099895 0.004285 0.831569 0.054212 0.109934 0.050012 0.783410 0.050055 0.116523 0.012599 0.066683 0.004329 0.916389 0.000128 0.966316 0.012643 0.020913 0.866506 0.004329 0.099939 0.029227 0.054169 0.045898 0.829137 0.070797 0.029227 0.116567 0.029270 0.824936 0.033384 0.020956 0.137352 0.808308 0.045855 0.070840 0.004329 0.878977 0.020913 0.895648 0.004329 0.079110 0.033384 0.725213 0.000172 0.241232 0.050012 0.370144 0.020956 0.558888 0.016756 0.729369 0.020956 0.232918 0.587989 0.129038 0.124881 0.158092 MOTIF 37-CTCTACTAAAAATACA STREME-37 letter-probability matrix: alength= 4 w= 16 nsites= 44 E= 4.9e+000 0.049342 0.948905 0.001004 0.000749 0.000749 0.025300 0.001004 0.972947 0.000749 0.997498 0.001004 0.000749 0.025046 0.001004 0.001004 0.972947 0.997244 0.001004 0.001004 0.000749 0.000749 0.948905 0.025300 0.025046 0.049343 0.025300 0.001004 0.924353 0.997244 0.001004 0.001004 0.000749 0.972947 0.025300 0.001004 0.000749 0.997244 0.001004 0.001004 0.000749 0.972947 0.001004 0.001004 0.025046 0.948651 0.025300 0.001004 0.025046 0.000749 0.001004 0.001004 0.997244 0.997244 0.001004 0.001004 0.000749 0.000749 0.948905 0.001004 0.049342 0.997244 0.001004 0.001004 0.000749 MOTIF 38-CCTCAAGTGATC STREME-38 letter-probability matrix: alength= 4 w= 12 nsites= 45 E= 9.7e+000 0.025784 0.822320 0.151125 0.000771 0.000771 0.997425 0.001033 0.000771 0.000771 0.011414 0.001033 0.986782 0.000771 0.997425 0.001033 0.000771 0.897108 0.026046 0.001033 0.075813 0.721977 0.001033 0.251206 0.025784 0.050798 0.001033 0.947398 0.000771 0.000771 0.001033 0.026046 0.972150 0.000771 0.026046 0.947399 0.025784 0.997163 0.001033 0.001033 0.000771 0.000771 0.011414 0.001033 0.986782 0.000771 0.997425 0.001033 0.000771 MOTIF 39-CCATTTTACAGAT STREME-39 letter-probability matrix: alength= 4 w= 13 nsites= 47 E= 9.7e+000 0.245195 0.640549 0.113676 0.000580 0.094663 0.903979 0.000777 0.000580 0.997865 0.000777 0.000777 0.000580 0.000580 0.038410 0.000777 0.960232 0.000580 0.000777 0.170126 0.828517 0.000580 0.076043 0.000777 0.922599 0.000580 0.000777 0.000777 0.997865 0.866148 0.000777 0.132495 0.000580 0.000580 0.828714 0.057227 0.113479 0.941416 0.000777 0.057227 0.000580 0.075848 0.000777 0.640547 0.282828 0.922599 0.019594 0.000777 0.057030 0.226378 0.113677 0.057227 0.602718 ******************************************************************************** Stopped because 3 consecutive motifs exceeded the p-value threshold (0.05). ******************************************************************************** COMMAND: streme --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_BCG_TRIM1_7_peaks/streme_out -dna --p /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d6_BCG_TRIM1_7_peaks/seqs-centered --minw 5 --maxw 20 --order 2 ******************************************************************************** CPU: cn45 ******************************************************************************** FINALTIME: 1787.49 seconds ********************************************************************************