******************************************************************************** STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation ******************************************************************************** MEME version 5.4.1 (Release date: Sat Aug 21 19:23:23 2021 -0700) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey, "STREME: accurate and versatile sequence motif discovery", Bioinformatics, Mar. 24, 2021. ******************************************************************************** ALPHABET= ACGT strands: + - Background letter frequencies A 0.201 C 0.299 G 0.299 T 0.201 MOTIF 1-CTGGGATTACAGGCRT STREME-1 letter-probability matrix: alength= 4 w= 16 nsites= 981 E= 1.3e-030 0.009286 0.933957 0.011616 0.045142 0.013912 0.016242 0.001206 0.968639 0.068273 0.000050 0.928174 0.003503 0.055551 0.003520 0.935113 0.005816 0.059021 0.001206 0.933956 0.005816 0.976735 0.000050 0.019712 0.003503 0.006973 0.252228 0.004676 0.736123 0.002347 0.034747 0.006989 0.955917 0.960543 0.005833 0.031277 0.002347 0.010443 0.900413 0.009303 0.079841 0.977892 0.008146 0.006989 0.006973 0.048610 0.004676 0.937427 0.009286 0.047453 0.006989 0.939741 0.005816 0.012756 0.709484 0.008146 0.269614 0.351821 0.023184 0.599516 0.025480 0.011599 0.321666 0.011615 0.655119 MOTIF 2-CCTCAGCCTCCCRARK STREME-2 letter-probability matrix: alength= 4 w= 16 nsites= 950 E= 3.4e-027 0.000033 0.966581 0.002346 0.031040 0.000033 0.947059 0.003495 0.049414 0.002330 0.006940 0.000050 0.990681 0.011517 0.833260 0.014979 0.140244 0.602216 0.055176 0.300078 0.042530 0.039078 0.002346 0.947059 0.011517 0.008072 0.957394 0.004643 0.029892 0.002330 0.957394 0.005791 0.034485 0.006923 0.012681 0.000050 0.980346 0.001182 0.960838 0.006940 0.031041 0.005775 0.958543 0.000050 0.035633 0.027595 0.780447 0.012681 0.179277 0.637912 0.016127 0.328701 0.017260 0.885020 0.011533 0.097672 0.005775 0.495414 0.003495 0.499910 0.001182 0.026447 0.019572 0.449495 0.504487 MOTIF 3-ASWCCAGCCTGGSCAACA STREME-3 letter-probability matrix: alength= 4 w= 18 nsites= 840 E= 7.9e-025 0.978894 0.009224 0.011844 0.000038 0.013135 0.374775 0.598955 0.013135 0.606795 0.007915 0.022322 0.362969 0.009206 0.929143 0.014463 0.047188 0.005277 0.940929 0.000056 0.053738 0.985442 0.000056 0.014463 0.000038 0.026232 0.017083 0.863633 0.093052 0.019684 0.927833 0.007915 0.044569 0.009206 0.943550 0.005295 0.041948 0.014445 0.009225 0.001366 0.974965 0.039329 0.003986 0.950099 0.006586 0.110088 0.003986 0.874101 0.011825 0.032781 0.436497 0.514967 0.015754 0.018374 0.753559 0.017083 0.210984 0.740434 0.010534 0.241136 0.007896 0.974965 0.000056 0.022322 0.002657 0.015754 0.899016 0.015773 0.069456 0.952700 0.006605 0.035418 0.005277 MOTIF 4-WTTTTTWKTAGAGACRGGGT STREME-4 letter-probability matrix: alength= 4 w= 20 nsites= 871 E= 1.5e-024 0.535503 0.016822 0.033589 0.414086 0.055496 0.027140 0.028430 0.888934 0.028412 0.011663 0.021981 0.937944 0.025833 0.011663 0.020691 0.941813 0.019384 0.006504 0.021981 0.952131 0.014225 0.021981 0.016822 0.946972 0.505839 0.012953 0.049066 0.432142 0.042599 0.003925 0.611618 0.341859 0.003907 0.014243 0.009084 0.972767 0.649002 0.005215 0.036168 0.309615 0.029701 0.034879 0.917326 0.018094 0.971477 0.003925 0.012953 0.011645 0.030991 0.009084 0.952149 0.007776 0.956000 0.003925 0.031010 0.009066 0.009066 0.661890 0.009084 0.319961 0.356064 0.012953 0.601281 0.029702 0.085162 0.012953 0.890240 0.011645 0.292848 0.011663 0.678685 0.016804 0.063235 0.016822 0.886372 0.033571 0.010355 0.011663 0.018112 0.959870 MOTIF 5-RGGAGRATCRCTTGA STREME-5 letter-probability matrix: alength= 4 w= 15 nsites= 697 E= 1.3e-018 0.642694 0.003257 0.336469 0.017580 0.036709 0.025573 0.912168 0.025550 0.054242 0.004851 0.940861 0.000046 0.668203 0.135571 0.014415 0.181812 0.113230 0.003257 0.878685 0.004828 0.464151 0.000069 0.532546 0.003234 0.985470 0.003257 0.011227 0.000046 0.000046 0.009633 0.006445 0.983876 0.008016 0.731980 0.057465 0.202539 0.502315 0.023979 0.449749 0.023958 0.000046 0.947237 0.008039 0.044678 0.008016 0.215309 0.033554 0.743121 0.003234 0.006445 0.011227 0.979095 0.011204 0.004851 0.980711 0.003234 0.988658 0.000069 0.011227 0.000046 MOTIF 6-AAATTAGCYRGGCRTGGT STREME-6 letter-probability matrix: alength= 4 w= 18 nsites= 555 E= 4.6e-017 0.963345 0.014251 0.016275 0.006129 0.955251 0.012228 0.010204 0.022317 0.918829 0.014251 0.032463 0.034458 0.038504 0.032462 0.024369 0.904665 0.022317 0.030439 0.014251 0.932993 0.949181 0.000087 0.044603 0.006129 0.020293 0.008181 0.957303 0.014223 0.012199 0.928974 0.008181 0.050645 0.012199 0.582894 0.002111 0.402796 0.340027 0.012228 0.613287 0.034458 0.034457 0.010204 0.947186 0.008153 0.068856 0.010204 0.904693 0.016246 0.024340 0.706366 0.006158 0.263137 0.374437 0.030439 0.570783 0.024340 0.002082 0.062814 0.002111 0.932993 0.087068 0.002111 0.904693 0.006129 0.056716 0.008181 0.924927 0.010176 0.004106 0.030439 0.008181 0.957275 MOTIF 7-GAGCCACYRYGCCYRGCC STREME-7 letter-probability matrix: alength= 4 w= 18 nsites= 419 E= 4.6e-013 0.067254 0.026987 0.905681 0.000078 0.927140 0.021612 0.002803 0.048445 0.075315 0.000116 0.911056 0.013513 0.005452 0.951361 0.010864 0.032323 0.000078 0.956735 0.002803 0.040384 0.970133 0.008177 0.005490 0.016200 0.000078 0.964797 0.005490 0.029636 0.016200 0.634280 0.021612 0.327907 0.338655 0.005490 0.631594 0.024261 0.024261 0.631591 0.013551 0.330596 0.276849 0.016238 0.690712 0.016200 0.018887 0.921803 0.005490 0.053819 0.000078 0.940613 0.010864 0.048445 0.029636 0.612781 0.002803 0.354780 0.338655 0.024299 0.623532 0.013513 0.043071 0.013551 0.937926 0.005452 0.018887 0.921804 0.002803 0.056506 0.056506 0.741770 0.021612 0.180111 MOTIF 8-ATCTCGGCTCACTGCA STREME-8 letter-probability matrix: alength= 4 w= 16 nsites= 410 E= 3.8e-012 0.935389 0.000120 0.064409 0.000081 0.011262 0.022481 0.005711 0.960546 0.005671 0.971766 0.000120 0.022442 0.151021 0.008506 0.006871 0.833603 0.016852 0.650246 0.008506 0.324396 0.314434 0.016891 0.637848 0.030827 0.028033 0.011301 0.957790 0.002876 0.005671 0.949406 0.014096 0.030827 0.002876 0.019686 0.000120 0.977317 0.005671 0.971766 0.000120 0.022442 0.982907 0.002916 0.014096 0.000081 0.002876 0.952200 0.005711 0.039213 0.008466 0.083976 0.008506 0.899051 0.086731 0.011301 0.879527 0.022442 0.019647 0.932634 0.005711 0.042008 0.943776 0.022481 0.022482 0.011261 MOTIF 9-CGAACTCCTGACC STREME-9 letter-probability matrix: alength= 4 w= 13 nsites= 478 E= 1.1e-011 0.020335 0.645105 0.018115 0.316444 0.233042 0.024871 0.735265 0.006822 0.999740 0.000097 0.000097 0.000065 0.820844 0.009106 0.014545 0.155505 0.002318 0.961485 0.004601 0.031596 0.011326 0.013610 0.004601 0.970462 0.004570 0.959233 0.002349 0.033848 0.004570 0.945719 0.004601 0.045110 0.000065 0.060908 0.002349 0.936678 0.047362 0.004601 0.943467 0.004570 0.765847 0.009106 0.220478 0.004570 0.034783 0.812258 0.129436 0.023522 0.004570 0.956980 0.004601 0.033849 MOTIF 10-CCCCRCCCCG STREME-10 letter-probability matrix: alength= 4 w= 10 nsites= 1741 E= 1.0e-004 0.001700 0.983413 0.002750 0.012138 0.050140 0.924128 0.001404 0.024327 0.000067 0.973747 0.017139 0.009047 0.045604 0.791925 0.091292 0.071179 0.620097 0.000100 0.379736 0.000067 0.087973 0.777295 0.087401 0.047331 0.000067 0.960884 0.033006 0.006043 0.010335 0.924620 0.002782 0.062263 0.004319 0.860831 0.012791 0.122060 0.100443 0.204151 0.666899 0.028507 MOTIF 11-GCAGTGGCGC STREME-11 letter-probability matrix: alength= 4 w= 10 nsites= 339 E= 3.7e-003 0.000130 0.000193 0.999547 0.000130 0.000130 0.953915 0.000193 0.045762 0.999484 0.000193 0.000193 0.000130 0.108636 0.000193 0.891041 0.000130 0.000130 0.039730 0.000193 0.959947 0.000130 0.000193 0.990588 0.009089 0.000130 0.000193 0.999547 0.000130 0.019742 0.679687 0.000193 0.300377 0.276763 0.000193 0.679299 0.043744 0.000130 0.694039 0.057637 0.248194 MOTIF 12-SRGGAGGYGGAGGY STREME-12 letter-probability matrix: alength= 4 w= 14 nsites= 460 E= 6.1e-003 0.062778 0.485255 0.254520 0.197447 0.513685 0.015403 0.447082 0.023830 0.037235 0.003913 0.958797 0.000056 0.034525 0.000083 0.946187 0.019205 0.983665 0.000083 0.000083 0.016170 0.119623 0.119606 0.745395 0.015375 0.005801 0.005828 0.957677 0.030695 0.141971 0.426719 0.000083 0.431227 0.101226 0.187429 0.627029 0.084316 0.109355 0.001998 0.888592 0.000056 0.926761 0.003913 0.055866 0.013460 0.058300 0.015402 0.916667 0.009630 0.061010 0.163701 0.726564 0.048725 0.131820 0.356109 0.000083 0.511988 MOTIF 13-TCACCATGTTGGCCA STREME-13 letter-probability matrix: alength= 4 w= 15 nsites= 121 E= 2.1e-002 0.000273 0.000406 0.028668 0.970653 0.000273 0.838896 0.000406 0.160424 0.744558 0.047509 0.169977 0.037956 0.000273 0.923683 0.009827 0.066217 0.000273 0.810631 0.000406 0.188689 0.725709 0.104037 0.141719 0.028535 0.047376 0.047509 0.000406 0.904708 0.132163 0.000406 0.848316 0.019115 0.009694 0.066350 0.009827 0.914129 0.000273 0.019247 0.000406 0.980073 0.122746 0.009827 0.848312 0.019115 0.056797 0.283028 0.631641 0.028535 0.000273 0.848317 0.019247 0.132162 0.019115 0.933103 0.009827 0.037956 0.998914 0.000406 0.000406 0.000273 MOTIF 14-GCGGCGGCGGCGGC STREME-14 letter-probability matrix: alength= 4 w= 14 nsites= 435 E= 9.4e-002 0.038668 0.000135 0.961106 0.000091 0.209797 0.699181 0.015887 0.075136 0.044475 0.000135 0.955299 0.000091 0.038191 0.003261 0.927190 0.031358 0.040700 0.913460 0.000135 0.045706 0.029564 0.000135 0.966217 0.004084 0.054218 0.009886 0.934241 0.001654 0.006539 0.979451 0.009516 0.004495 0.130492 0.049816 0.787300 0.032392 0.032224 0.000135 0.951916 0.015724 0.000091 0.925312 0.024477 0.050120 0.023543 0.083588 0.848870 0.043998 0.011629 0.020350 0.964804 0.003217 0.029901 0.897761 0.025646 0.046692 MOTIF 15-GGGCGGATCACGA STREME-15 letter-probability matrix: alength= 4 w= 13 nsites= 103 E= 1.7e-001 0.055075 0.014258 0.930270 0.000397 0.000397 0.000589 0.998617 0.000397 0.027735 0.000589 0.971279 0.000397 0.014066 0.684149 0.000589 0.301196 0.137100 0.000589 0.848245 0.014066 0.014066 0.000589 0.984948 0.000397 0.984756 0.014258 0.000589 0.000397 0.000397 0.000589 0.000589 0.998425 0.000397 0.971279 0.014258 0.014066 0.984756 0.000589 0.014258 0.000397 0.014066 0.697873 0.000589 0.287472 0.123437 0.041597 0.834569 0.000397 0.984756 0.000589 0.000589 0.014066 MOTIF 16-KTWGAGACRGGGTYTCRC STREME-16 letter-probability matrix: alength= 4 w= 18 nsites= 68 E= 1.7e-001 0.016296 0.064029 0.523296 0.396378 0.000460 0.079866 0.032356 0.887318 0.649767 0.000683 0.016519 0.333031 0.063806 0.000683 0.935051 0.000460 0.982338 0.000683 0.000683 0.016296 0.047970 0.000683 0.935051 0.016296 0.982338 0.016519 0.000683 0.000460 0.000460 0.792521 0.032356 0.174663 0.649767 0.000683 0.333254 0.016296 0.095480 0.000683 0.871704 0.032133 0.253847 0.048193 0.634153 0.063806 0.127153 0.032356 0.776684 0.063806 0.016296 0.032356 0.000683 0.950665 0.000460 0.570804 0.016519 0.412217 0.000460 0.000683 0.016519 0.982338 0.000460 0.697500 0.048193 0.253847 0.586419 0.048193 0.349091 0.016296 0.063806 0.824194 0.000683 0.111317 MOTIF 17-TGGTGAA STREME-17 letter-probability matrix: alength= 4 w= 7 nsites= 384 E= 2.1e-001 0.018291 0.027164 0.027164 0.927382 0.018291 0.027164 0.936255 0.018291 0.018291 0.027164 0.936255 0.018291 0.018291 0.027164 0.027164 0.927382 0.018291 0.027164 0.936255 0.018291 0.927382 0.027164 0.027164 0.018291 0.927382 0.027164 0.027164 0.018291 MOTIF 18-GCCTCAGTTTCCYCA STREME-18 letter-probability matrix: alength= 4 w= 15 nsites= 165 E= 3.4e-001 0.075819 0.006575 0.892211 0.025395 0.019092 0.898514 0.000272 0.082122 0.019092 0.832868 0.012878 0.135162 0.038001 0.000272 0.044393 0.917334 0.000183 0.841787 0.056999 0.101031 0.797577 0.012878 0.126332 0.063213 0.012789 0.019181 0.955241 0.012789 0.025395 0.094817 0.000272 0.879516 0.006486 0.113726 0.101120 0.778667 0.000183 0.000272 0.025484 0.974062 0.053223 0.826565 0.031787 0.088425 0.012789 0.820262 0.006575 0.160374 0.038001 0.478239 0.006575 0.477186 0.000183 0.769835 0.000272 0.229710 0.561156 0.118001 0.157850 0.162992 MOTIF 19-GCTGTGTGACCTTGGGCA STREME-19 letter-probability matrix: alength= 4 w= 18 nsites= 78 E= 3.4e-001 0.062749 0.137790 0.674324 0.125137 0.000362 0.936350 0.013015 0.050272 0.000362 0.025493 0.000538 0.973607 0.087704 0.187700 0.699279 0.025317 0.000362 0.100358 0.075403 0.823878 0.037795 0.000538 0.961305 0.000362 0.000362 0.050448 0.037970 0.911220 0.087704 0.037970 0.873963 0.000362 0.836355 0.025493 0.137790 0.000362 0.025317 0.799098 0.013015 0.162569 0.000362 0.824053 0.050448 0.125137 0.062749 0.150267 0.050448 0.736536 0.075227 0.112835 0.050448 0.761490 0.162569 0.037970 0.786621 0.012840 0.249911 0.013015 0.674324 0.062749 0.237434 0.087880 0.661846 0.012840 0.200001 0.711756 0.025493 0.062749 0.661671 0.187700 0.087880 0.062749 MOTIF 20-GATTACAGGCAT STREME-20 letter-probability matrix: alength= 4 w= 12 nsites= 52 E= 3.4e-001 0.073614 0.001048 0.924632 0.000705 0.948593 0.025351 0.001048 0.025008 0.000705 0.195490 0.001048 0.802757 0.000705 0.001048 0.025351 0.972896 0.948593 0.025351 0.025351 0.000705 0.000705 0.973238 0.001048 0.025008 0.924289 0.001048 0.073958 0.000705 0.025008 0.001048 0.973238 0.000705 0.025008 0.001048 0.973238 0.000705 0.000705 0.900326 0.001048 0.097921 0.778465 0.025351 0.195479 0.000705 0.000705 0.244099 0.025351 0.729845 MOTIF 21-GTCCCCA STREME-21 letter-probability matrix: alength= 4 w= 7 nsites= 408 E= 3.8e-001 0.018291 0.027164 0.936255 0.018291 0.018291 0.027164 0.027164 0.927382 0.018291 0.936255 0.027164 0.018291 0.018291 0.936255 0.027164 0.018291 0.018291 0.936255 0.027164 0.018291 0.018291 0.936255 0.027164 0.018291 0.927382 0.027164 0.027164 0.018291 MOTIF 22-CCCGGCTC STREME-22 letter-probability matrix: alength= 4 w= 8 nsites= 376 E= 3.8e-001 0.018291 0.936255 0.027164 0.018291 0.018291 0.936255 0.027164 0.018291 0.018291 0.936255 0.027164 0.018291 0.018291 0.027164 0.936255 0.018291 0.018291 0.027164 0.936255 0.018291 0.018291 0.936255 0.027164 0.018291 0.018291 0.027164 0.027164 0.927382 0.018291 0.936255 0.027164 0.018291 MOTIF 23-CTCGGCCTC STREME-23 letter-probability matrix: alength= 4 w= 9 nsites= 1314 E= 5.0e-001 0.023485 0.963224 0.005602 0.007689 0.036552 0.000559 0.028998 0.933891 0.043395 0.931811 0.000559 0.024235 0.053130 0.022785 0.864232 0.059852 0.005043 0.045797 0.873580 0.075580 0.009692 0.917113 0.067224 0.005970 0.025309 0.840537 0.120820 0.013334 0.018203 0.063596 0.048142 0.870059 0.009530 0.941644 0.036301 0.012524 MOTIF 24-AGGAA STREME-24 letter-probability matrix: alength= 4 w= 5 nsites= 4030 E= 6.4e-001 0.927382 0.027164 0.027164 0.018291 0.018291 0.027164 0.936255 0.018291 0.018291 0.027164 0.936255 0.018291 0.927382 0.027164 0.027164 0.018291 0.927382 0.027164 0.027164 0.018291 MOTIF 25-SCGGGGAC STREME-25 letter-probability matrix: alength= 4 w= 8 nsites= 2179 E= 6.5e-001 0.058032 0.374302 0.448791 0.118875 0.000179 0.999375 0.000266 0.000179 0.157558 0.177359 0.664904 0.000179 0.027532 0.000266 0.972022 0.000179 0.000179 0.072368 0.793273 0.134180 0.000179 0.000266 0.999375 0.000179 0.782373 0.000266 0.000266 0.217095 0.000179 0.999375 0.000266 0.000179 MOTIF 26-CTACTAAAAATACA STREME-26 letter-probability matrix: alength= 4 w= 14 nsites= 56 E= 6.8e-001 0.000567 0.998022 0.000843 0.000567 0.000567 0.039942 0.000843 0.958648 0.841350 0.079041 0.000843 0.078766 0.000567 0.919824 0.079041 0.000567 0.137418 0.000843 0.000843 0.860897 0.939097 0.000843 0.000843 0.059217 0.899998 0.079042 0.020392 0.000567 0.919548 0.000843 0.059492 0.020117 0.880448 0.000843 0.000843 0.117866 0.899999 0.020392 0.059492 0.020117 0.000567 0.098591 0.020392 0.880449 0.997747 0.000843 0.000843 0.000567 0.059216 0.900274 0.039942 0.000567 0.978197 0.000843 0.000843 0.020117 MOTIF 27-CCGGCCCGGCCC STREME-27 letter-probability matrix: alength= 4 w= 12 nsites= 168 E= 7.5e-001 0.000480 0.956284 0.000713 0.042522 0.000480 0.904349 0.000713 0.094457 0.000480 0.242869 0.721892 0.034758 0.066674 0.000713 0.915584 0.017028 0.000480 0.998326 0.000713 0.000480 0.017028 0.945398 0.030226 0.007348 0.066680 0.932126 0.000713 0.000480 0.000480 0.000713 0.921230 0.077577 0.050124 0.000713 0.890091 0.059071 0.050126 0.896677 0.052716 0.000480 0.000480 0.998326 0.000713 0.000480 0.000480 0.908045 0.060120 0.031355 MOTIF 28-AGGAAGTG STREME-28 letter-probability matrix: alength= 4 w= 8 nsites= 434 E= 9.0e-001 0.692742 0.306324 0.000558 0.000376 0.014302 0.002923 0.974724 0.008051 0.000376 0.029924 0.908133 0.061567 0.998478 0.000558 0.000558 0.000405 0.982361 0.006056 0.000558 0.011025 0.000376 0.047449 0.919832 0.032343 0.000376 0.107894 0.000558 0.891172 0.011652 0.032606 0.944654 0.011089 MOTIF 29-TAGAA STREME-29 letter-probability matrix: alength= 4 w= 5 nsites= 1601 E= 9.6e-001 0.018291 0.027164 0.027164 0.927382 0.927382 0.027164 0.027164 0.018291 0.018291 0.027164 0.936255 0.018291 0.927382 0.027164 0.027164 0.018291 0.927382 0.027164 0.027164 0.018291 MOTIF 30-CAGCCCCGGCC STREME-30 letter-probability matrix: alength= 4 w= 11 nsites= 1102 E= 1.2e+000 0.050291 0.827046 0.077072 0.045592 0.999731 0.000101 0.000101 0.000068 0.042697 0.006071 0.810746 0.140486 0.053284 0.922368 0.024280 0.000068 0.006763 0.985751 0.004636 0.002849 0.050513 0.815562 0.012439 0.121486 0.052324 0.716782 0.042960 0.187933 0.085412 0.009204 0.816557 0.088827 0.122982 0.146734 0.623491 0.106793 0.065197 0.795824 0.127524 0.011454 0.051827 0.698735 0.107115 0.142323 MOTIF 31-AAGATGGCGKC STREME-31 letter-probability matrix: alength= 4 w= 11 nsites= 73 E= 1.4e+000 0.873610 0.006076 0.093405 0.026909 0.773018 0.146455 0.013834 0.066694 0.000385 0.080145 0.892561 0.026909 0.913397 0.019337 0.040357 0.026909 0.013647 0.013834 0.040359 0.932161 0.000385 0.027095 0.972135 0.000385 0.072198 0.027095 0.855032 0.045674 0.053434 0.940105 0.000572 0.005889 0.000385 0.027096 0.958872 0.013647 0.053433 0.013834 0.332307 0.600426 0.000385 0.945611 0.027095 0.026909 MOTIF 32-CACTTTGGGAGGC STREME-32 letter-probability matrix: alength= 4 w= 13 nsites= 57 E= 1.4e+000 0.000552 0.998076 0.000820 0.000552 0.997808 0.000820 0.000820 0.000552 0.000552 0.921999 0.000820 0.076629 0.000552 0.000820 0.000820 0.997808 0.000552 0.000820 0.000820 0.997808 0.000552 0.000820 0.038856 0.959772 0.057607 0.000820 0.941022 0.000552 0.008445 0.000820 0.990183 0.000552 0.019570 0.000820 0.979058 0.000552 0.921734 0.019838 0.057876 0.000552 0.057607 0.000820 0.941022 0.000552 0.019570 0.038856 0.941022 0.000552 0.000552 0.960039 0.000820 0.038589 MOTIF 33-AGACCAGCCTG STREME-33 letter-probability matrix: alength= 4 w= 11 nsites= 52 E= 1.4e+000 0.966333 0.031489 0.001301 0.000876 0.000876 0.001301 0.966758 0.031064 0.996521 0.001301 0.001301 0.000876 0.000876 0.966758 0.001301 0.031064 0.013405 0.978603 0.001301 0.006691 0.996521 0.001301 0.001301 0.000876 0.000876 0.091869 0.809990 0.097264 0.000876 0.946287 0.001301 0.051535 0.000876 0.936569 0.001301 0.061253 0.000876 0.051960 0.001301 0.945862 0.031064 0.001301 0.845999 0.121636 MOTIF 34-AACAACAACAAAAA STREME-34 letter-probability matrix: alength= 4 w= 14 nsites= 35 E= 1.4e+000 0.996177 0.001430 0.001430 0.000963 0.929831 0.001430 0.067777 0.000963 0.067310 0.930297 0.001430 0.000963 0.863484 0.001430 0.001430 0.133656 0.996177 0.001430 0.001430 0.000963 0.200006 0.664908 0.001430 0.133656 0.963004 0.001430 0.001430 0.034136 0.896657 0.034603 0.001430 0.067309 0.000963 0.930298 0.034603 0.034136 0.929829 0.067778 0.001430 0.000963 0.996177 0.001430 0.001430 0.000963 0.664434 0.233653 0.067777 0.034136 0.896657 0.067777 0.034603 0.000963 0.697616 0.134125 0.100950 0.067309 MOTIF 35-AAAAAVAAAAAAAAAAAAA STREME-35 letter-probability matrix: alength= 4 w= 19 nsites= 214 E= 1.4e+000 0.921385 0.037112 0.017272 0.024232 0.945162 0.047650 0.007036 0.000153 0.781171 0.037111 0.026573 0.155145 0.960322 0.000227 0.000227 0.039224 0.878203 0.000227 0.058187 0.063382 0.359871 0.276410 0.205493 0.158227 0.962509 0.037111 0.000227 0.000153 0.951971 0.000227 0.000227 0.047575 0.793897 0.047649 0.005496 0.152958 0.888741 0.089802 0.000227 0.021229 0.646356 0.100341 0.184651 0.068652 0.757013 0.110879 0.000227 0.131881 0.978316 0.016035 0.000227 0.005422 0.909818 0.052918 0.037111 0.000153 0.776334 0.005496 0.044136 0.174034 0.635868 0.095072 0.110833 0.158227 0.687580 0.047649 0.175043 0.089728 0.649661 0.153561 0.010019 0.186759 0.862251 0.000227 0.035831 0.101690 MOTIF 36-ACTCCAGCCTGGGBA STREME-36 letter-probability matrix: alength= 4 w= 15 nsites= 69 E= 1.4e+000 0.913514 0.034544 0.034544 0.017398 0.017398 0.863028 0.051452 0.068122 0.051214 0.034544 0.034544 0.879698 0.000491 0.930660 0.068359 0.000491 0.017398 0.863027 0.051451 0.068123 0.947329 0.017636 0.000729 0.034306 0.068121 0.034544 0.879937 0.017398 0.017398 0.981382 0.000729 0.000491 0.000491 0.947567 0.017636 0.034306 0.000491 0.034544 0.000729 0.964236 0.034307 0.017636 0.913751 0.034306 0.000491 0.034544 0.964475 0.000491 0.051213 0.152898 0.643221 0.152667 0.085028 0.338880 0.338890 0.237202 0.727526 0.017636 0.237439 0.017398 MOTIF 37-CCTCCCAAGTAG STREME-37 letter-probability matrix: alength= 4 w= 12 nsites= 50 E= 1.5e+000 0.026909 0.971205 0.001127 0.000759 0.000759 0.918905 0.027277 0.053059 0.000759 0.027277 0.001127 0.970836 0.000759 0.918903 0.027277 0.053060 0.000759 0.945055 0.053427 0.000759 0.026909 0.918905 0.053427 0.000759 0.787768 0.027277 0.158046 0.026909 0.970836 0.001127 0.027277 0.000759 0.026909 0.053427 0.918905 0.000759 0.000759 0.079581 0.011980 0.907680 0.953103 0.001127 0.045010 0.000759 0.026909 0.001127 0.971205 0.000759 MOTIF 38-CGCCCCCTCCC STREME-38 letter-probability matrix: alength= 4 w= 11 nsites= 313 E= 1.6e+000 0.000313 0.967291 0.000465 0.031930 0.023391 0.000465 0.975831 0.000313 0.083994 0.771154 0.049281 0.095570 0.053306 0.791539 0.018495 0.136661 0.027496 0.800001 0.111517 0.060987 0.000313 0.972453 0.008357 0.018877 0.011107 0.763634 0.003698 0.221561 0.014768 0.000465 0.040433 0.944334 0.011107 0.907692 0.011767 0.069434 0.000313 0.998908 0.000465 0.000313 0.007342 0.953640 0.018131 0.020886 MOTIF 39-AATCCCAGCT STREME-39 letter-probability matrix: alength= 4 w= 10 nsites= 215 E= 1.6e+000 0.968910 0.008123 0.016947 0.006019 0.722492 0.082301 0.168048 0.027159 0.029801 0.003330 0.038317 0.928552 0.002342 0.976697 0.016737 0.004223 0.000366 0.962126 0.000456 0.037052 0.025831 0.922776 0.021592 0.029801 0.933798 0.004842 0.016737 0.044623 0.001291 0.011024 0.985613 0.002072 0.010875 0.983098 0.001439 0.004588 0.247434 0.027759 0.002491 0.722316 MOTIF 40-CCCCACGCCC STREME-40 letter-probability matrix: alength= 4 w= 10 nsites= 343 E= 1.8e+000 0.026186 0.962436 0.005994 0.005383 0.031309 0.941994 0.015071 0.011626 0.024532 0.930515 0.024756 0.020197 0.087117 0.891070 0.006946 0.014867 0.818518 0.000623 0.130497 0.050362 0.039188 0.892994 0.000623 0.067196 0.048865 0.000623 0.950093 0.000419 0.045823 0.879430 0.037618 0.037130 0.040741 0.920916 0.033433 0.004910 0.006147 0.987083 0.000623 0.006147 MOTIF 41-CAGCAGCAGCAGCRGSAGC STREME-41 letter-probability matrix: alength= 4 w= 19 nsites= 171 E= 2.1e+000 0.024250 0.656316 0.265089 0.054344 0.788646 0.096561 0.114618 0.000175 0.006194 0.054429 0.939203 0.000175 0.240929 0.734561 0.012297 0.012212 0.860873 0.006278 0.030354 0.102495 0.012212 0.006278 0.981335 0.000175 0.006194 0.933184 0.060448 0.000175 0.734477 0.066467 0.186844 0.012212 0.000175 0.024335 0.975316 0.000175 0.012212 0.921146 0.024335 0.042307 0.662250 0.060448 0.144712 0.132590 0.090458 0.198882 0.686411 0.024250 0.120552 0.626222 0.228976 0.024250 0.391402 0.126655 0.331296 0.150646 0.030269 0.096561 0.812807 0.060363 0.024250 0.529920 0.427598 0.018231 0.565949 0.168787 0.138693 0.126571 0.114533 0.120637 0.740580 0.024250 0.168703 0.511864 0.234995 0.084439 MOTIF 42-CACGTG STREME-42 letter-probability matrix: alength= 4 w= 6 nsites= 446 E= 3.4e+000 0.003792 0.720285 0.038160 0.237763 0.984946 0.005631 0.005631 0.003792 0.003792 0.986786 0.005631 0.003792 0.003792 0.005631 0.986786 0.003792 0.003792 0.005631 0.005631 0.984946 0.237763 0.038160 0.720285 0.003792 MOTIF 43-GACGTC STREME-43 letter-probability matrix: alength= 4 w= 6 nsites= 163 E= 4.6e+000 0.004466 0.030641 0.946119 0.018774 0.982268 0.006633 0.006633 0.004466 0.004466 0.984435 0.006633 0.004466 0.004466 0.006633 0.984435 0.004466 0.004466 0.006633 0.006633 0.982268 0.018774 0.946119 0.030641 0.004466 MOTIF 44-ACTACAACTCCCA STREME-44 letter-probability matrix: alength= 4 w= 13 nsites= 39 E= 5.5e+000 0.952969 0.000958 0.045427 0.000645 0.089582 0.886580 0.023193 0.000645 0.045114 0.067661 0.000958 0.886267 0.997438 0.000958 0.000958 0.000645 0.000645 0.997751 0.000958 0.000645 0.854805 0.023193 0.121357 0.000645 0.734399 0.032420 0.099123 0.134058 0.000645 0.721705 0.054656 0.222994 0.111816 0.000958 0.000958 0.886267 0.134051 0.775407 0.000958 0.089583 0.000645 0.886580 0.000958 0.111816 0.045114 0.819877 0.000958 0.134051 0.708392 0.000958 0.245536 0.045114 ******************************************************************************** Stopped because 3 consecutive motifs exceeded the p-value threshold (0.05). ******************************************************************************** COMMAND: streme --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d1_beta_glu_TRIM1_2_peaks/streme_out -dna --p /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d1_beta_glu_TRIM1_2_peaks/seqs-centered --minw 5 --maxw 20 --order 2 ******************************************************************************** CPU: cn45 ******************************************************************************** FINALTIME: 1752.82 seconds ********************************************************************************