Query_ID Target_ID Optimal_offset p-value E-value q-value Overlap Query_consensus Target_consensus Orientation 1 1 0 0 0 0 20 TCTAAAAAAAAAAAAAAAAA TCTAAAAAAAAAAAAAAAAA + 1 14 8 0.000203683 0.00448102 0.00448102 12 TCTAAAAAAAAAAAAAAAAA ACCCCGTCTCTACAAAAAAT - 2 2 0 4.52619e-43 9.95763e-42 1.99153e-41 20 CTCCCAAATAGCTGGGATTA CTCCCAAATAGCTGGGATTA + 2 11 -6 2.82786e-08 6.22129e-07 6.22129e-07 14 CTCCCAAATAGCTGGGATTA AGTAGCTGGGATTACAGGC - 3 3 0 0 0 0 20 TCACCATGTTGCCCAGGCTG TCACCATGTTGCCCAGGCTG + 3 13 -3 1.12879e-19 2.48333e-18 2.48333e-18 17 TCACCATGTTGCCCAGGCTG CCATGTTGCCCAGGCTGG - 4 4 0 0 0 0 20 CTCAAGTGATCCTCCTGCCT CTCAAGTGATCCTCCTGCCT + 4 12 -8 2.67364e-06 5.88201e-05 5.88201e-05 12 CTCAAGTGATCCTCCTGCCT ATCCTCCTGCCTCAGCCTC - 5 5 0 0 0 0 20 CGTGAGCCACCACGCCCGGC CGTGAGCCACCACGCCCGGC + 5 15 -6 2.69239e-08 5.92326e-07 5.92326e-07 14 CGTGAGCCACCACGCCCGGC CCACCACGCCCGGCTAATTT - 5 21 -1 3.93926e-05 0.000866637 0.000577758 13 CGTGAGCCACCACGCCCGGC GTGAGCCACTGCG + 6 6 0 1.82169e-44 4.00771e-43 8.01543e-43 20 ATCTCGGCTCACTGCAACCT ATCTCGGCTCACTGCAACCT + 6 17 -5 1.93116e-13 4.24854e-12 4.24854e-12 15 ATCTCGGCTCACTGCAACCT GGCTCACTGCAACCTC - 6 18 0 0.0022572 0.0496585 0.0331056 17 ATCTCGGCTCACTGCAACCT AGATCGCGCCACTGCAC - 6 10 -7 0.006578 0.144716 0.0723581 12 ATCTCGGCTCACTGCAACCT GCCACTGCACTC + 7 7 0 1.4013e-45 3.08286e-44 6.16571e-44 16 GGCGGCGGCGGCGGCG GGCGGCGGCGGCGGCG + 7 20 2 7.01584e-10 1.54348e-08 1.54348e-08 16 GGCGGCGGCGGCGGCG GCGGCGGCGGCGGCGGCGG - 7 22 1 1.39527e-05 0.00030696 0.00020464 16 GGCGGCGGCGGCGGCG AGGAGGAGGAGGGGGAGG + 7 8 2 0.00658369 0.144841 0.0724206 16 GGCGGCGGCGGCGGCG GAGGGAGGGAGGGAGGGGGG - 8 8 0 0 0 0 20 CCCCCCTCCCTCCCTCCCTC CCCCCCTCCCTCCCTCCCTC + 8 22 -4 3.72517e-08 8.19538e-07 8.19538e-07 16 CCCCCCTCCCTCCCTCCCTC CCTCCCCCTCCTCCTCCT - 8 7 -2 0.00252217 0.0554878 0.0369919 16 CCCCCCTCCCTCCCTCCCTC CGCCGCCGCCGCCGCC - 8 20 -1 0.00543704 0.119615 0.0598074 19 CCCCCCTCCCTCCCTCCCTC CCGCCGCCGCCGCCGCCGC + 9 9 0 8.43334e-28 1.85534e-26 3.71067e-26 12 AGGAGTTCGAGA AGGAGTTCGAGA + 9 19 5 2.86574e-07 6.30463e-06 6.30463e-06 11 AGGAGTTCGAGA AGGTCAGGAGTTCGAG + 10 10 0 2.18096e-28 4.7981e-27 9.59621e-27 12 GCCACTGCACTC GCCACTGCACTC + 10 18 7 4.90559e-06 0.000107923 0.000107923 10 GCCACTGCACTC AGATCGCGCCACTGCAC - 11 11 0 8.68805e-44 1.91137e-42 3.82274e-42 19 GCCTGTAATCCCAGCTACT GCCTGTAATCCCAGCTACT + 11 2 -5 9.95899e-08 2.19098e-06 2.19098e-06 14 GCCTGTAATCCCAGCTACT TAATCCCAGCTATTTGGGAG - 12 12 0 0 0 0 19 GAGGCTGAGGCAGGAGGAT GAGGCTGAGGCAGGAGGAT + 12 4 -7 4.75179e-05 0.00104539 0.00104539 12 GAGGCTGAGGCAGGAGGAT AGGCAGGAGGATCACTTGAG - 12 22 2 0.00324625 0.0714174 0.0476116 16 GAGGCTGAGGCAGGAGGAT AGGAGGAGGAGGGGGAGG + 12 20 3 0.0104953 0.230897 0.0976022 16 GAGGCTGAGGCAGGAGGAT GCGGCGGCGGCGGCGGCGG - 12 7 -2 0.0110912 0.244006 0.0976022 16 GAGGCTGAGGCAGGAGGAT GGCGGCGGCGGCGGCG + 13 13 0 5.03066e-43 1.10675e-41 2.21349e-41 18 CCAGCCTGGGCAACATGG CCAGCCTGGGCAACATGG + 13 3 -1 2.50668e-16 5.51471e-15 5.51471e-15 17 CCAGCCTGGGCAACATGG CAGCCTGGGCAACATGGTGA - 14 14 0 0 0 0 20 ATTTTTTGTAGAGACGGGGT ATTTTTTGTAGAGACGGGGT + 14 1 8 0.00244279 0.0537414 0.0537414 12 ATTTTTTGTAGAGACGGGGT TTTTTTTTTTTTTTTTTAGA - 15 15 0 0 0 0 20 AAATTAGCCGGGCGTGGTGG AAATTAGCCGGGCGTGGTGG + 15 5 -6 3.9926e-08 8.78372e-07 8.78372e-07 14 AAATTAGCCGGGCGTGGTGG GCCGGGCGTGGTGGCTCACG - 16 16 0 2.70917e-36 5.96017e-35 1.19203e-34 14 CTTGAGCCCAGGAG CTTGAGCCCAGGAG + 17 17 0 2.72593e-37 5.99706e-36 1.19941e-35 16 GAGGTTGCAGTGAGCC GAGGTTGCAGTGAGCC + 17 6 -1 4.71357e-12 1.03698e-10 1.03698e-10 15 GAGGTTGCAGTGAGCC AGGTTGCAGTGAGCCGAGAT - 17 10 -2 0.00634195 0.139523 0.0930153 12 GAGGTTGCAGTGAGCC GAGTGCAGTGGC - 18 18 0 1.71118e-39 3.76461e-38 7.52921e-38 17 GTGCAGTGGCGCGATCT GTGCAGTGGCGCGATCT + 18 10 2 1.2971e-07 2.85363e-06 2.85363e-06 10 GTGCAGTGGCGCGATCT GAGTGCAGTGGC - 18 6 3 0.00311673 0.068568 0.045712 17 GTGCAGTGGCGCGATCT AGGTTGCAGTGAGCCGAGAT - 19 19 0 1.54563e-42 3.40039e-41 6.80078e-41 16 AGGTCAGGAGTTCGAG AGGTCAGGAGTTCGAG + 19 9 -5 1.82032e-07 4.00471e-06 4.00471e-06 11 AGGTCAGGAGTTCGAG AGGAGTTCGAGA + 19 16 4 0.00486405 0.107009 0.0713393 10 AGGTCAGGAGTTCGAG CTTGAGCCCAGGAG + 20 20 0 0 0 0 19 CCGCCGCCGCCGCCGCCGC CCGCCGCCGCCGCCGCCGC + 20 7 -1 7.9749e-08 1.75448e-06 1.75448e-06 16 CCGCCGCCGCCGCCGCCGC CGCCGCCGCCGCCGCC - 20 22 0 0.00150566 0.0331246 0.0220831 18 CCGCCGCCGCCGCCGCCGC CCTCCCCCTCCTCCTCCT - 21 21 0 1.03339e-31 2.27346e-30 4.54692e-30 13 GTGAGCCACTGCG GTGAGCCACTGCG + 21 5 1 3.45155e-06 7.59342e-05 7.59342e-05 13 GTGAGCCACTGCG CGTGAGCCACCACGCCCGGC + 22 22 0 0 0 0 18 AGGAGGAGGAGGGGGAGG AGGAGGAGGAGGGGGAGG + 22 8 1 7.58103e-08 1.66783e-06 1.66783e-06 18 AGGAGGAGGAGGGGGAGG GAGGGAGGGAGGGAGGGGGG - 22 7 -1 1.21626e-06 2.67577e-05 1.78385e-05 16 AGGAGGAGGAGGGGGAGG GGCGGCGGCGGCGGCG + 22 20 1 0.000405957 0.00893106 0.00446553 18 AGGAGGAGGAGGGGGAGG GCGGCGGCGGCGGCGGCGG - 22 12 -2 0.0094551 0.208012 0.0832049 16 AGGAGGAGGAGGGGGAGG GAGGCTGAGGCAGGAGGAT + # Tomtom (Motif Comparison Tool): Version 5.4.1 compiled on Aug 1 2022 at 17:19:44 # The format of this file is described at https://meme-suite.org/meme/doc/tomtom-output-format.html. # tomtom -verbosity 1 -text -thresh 0.1 /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_5_peaks/combined.meme /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_5_peaks/combined.meme