Query_ID	Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query_consensus	Target_consensus	Orientation
1	1	0	0	0	0	20	TTTTTTATTTTTTTTAGAGA	TTTTTTATTTTTTTTAGAGA	+
1	15	-2	8.20114e-08	1.96827e-06	1.96827e-06	16	TTTTTTATTTTTTTTAGAGA	AGCTATTTTTTTTATT	+
1	23	-4	0.00158026	0.0379263	0.0189632	8	TTTTTTATTTTTTTTAGAGA	GTATTTTT	-
2	2	0	5.46506e-44	1.31162e-42	2.62323e-42	18	GTAATCCCAGCACTTTGG	GTAATCCCAGCACTTTGG	+
2	8	3	2.24453e-11	5.38687e-10	5.38687e-10	15	GTAATCCCAGCACTTTGG	CCTGTAATCCCAGCTATT	+
3	3	0	0	0	0	20	ATCACTTGAGCCCAGGAGTT	ATCACTTGAGCCCAGGAGTT	+
3	14	-4	1.8344e-19	4.40256e-18	4.40256e-18	16	ATCACTTGAGCCCAGGAGTT	CTTGAGCCCAGGAGTT	-
3	12	-8	0.00618298	0.148391	0.0812558	12	ATCACTTGAGCCCAGGAGTT	AGGTCAGGAGTTCGAG	+
4	4	0	2.8026e-45	6.72623e-44	1.34525e-43	20	ATCTCGGCTCACTGCAACCT	ATCTCGGCTCACTGCAACCT	+
4	17	0	3.69781e-16	8.87474e-15	8.87474e-15	15	ATCTCGGCTCACTGCAACCT	ATCTCGGCTCACTGC	-
5	5	0	2.85289e-40	6.84693e-39	1.36939e-38	16	ACCAGCCTGGGCAACA	ACCAGCCTGGGCAACA	+
5	9	-1	4.0296e-18	9.67103e-17	9.67103e-17	15	ACCAGCCTGGGCAACA	CCAGCCTGGCCAACA	+
6	6	0	4.2039e-45	1.00893e-43	2.01787e-43	16	GAGGCGGAGGCGGGGG	GAGGCGGAGGCGGGGG	+
6	20	3	1.23542e-06	2.96501e-05	2.96501e-05	16	GAGGCGGAGGCGGGGG	GCGGCGGCGGCGGCGGCGGC	-
6	13	-1	2.0793e-05	0.000499032	0.000332688	15	GAGGCGGAGGCGGGGG	AGGCTGAGGCAGGAGGATC	+
6	19	1	0.000358383	0.00860119	0.00430059	11	GAGGCGGAGGCGGGGG	GGAGGCTGAGGC	-
6	10	2	0.00160365	0.0384875	0.015395	16	GAGGCGGAGGCGGGGG	GGGAGGAGGGGGAAGGGAGG	+
6	21	1	0.00971332	0.23312	0.0777066	7	GAGGCGGAGGCGGGGG	CGGGGCTG	-
7	7	0	5.7435e-41	1.37844e-39	2.75688e-39	16	AGGCGTGAGCCACCAC	AGGCGTGAGCCACCAC	+
7	18	-4	8.88514e-05	0.00213243	0.00213243	12	AGGCGTGAGCCACCAC	GTGAGCCACCGCGCCCGG	+
8	8	0	3.11088e-43	7.46612e-42	1.49322e-41	18	CCTGTAATCCCAGCTATT	CCTGTAATCCCAGCTATT	+
8	2	-3	2.76454e-10	6.63489e-09	6.63489e-09	15	CCTGTAATCCCAGCTATT	GTAATCCCAGCACTTTGG	+
9	9	0	1.90561e-35	4.57345e-34	9.14691e-34	15	CCAGCCTGGCCAACA	CCAGCCTGGCCAACA	+
9	5	1	1.22782e-16	2.94677e-15	2.94677e-15	15	CCAGCCTGGCCAACA	ACCAGCCTGGGCAACA	+
10	10	0	0	0	0	20	GGGAGGAGGGGGAAGGGAGG	GGGAGGAGGGGGAAGGGAGG	+
10	19	-1	5.20063e-05	0.00124815	0.00124815	12	GGGAGGAGGGGGAAGGGAGG	GGAGGCTGAGGC	-
10	6	1	0.000139519	0.00334846	0.00223231	15	GGGAGGAGGGGGAAGGGAGG	GAGGCGGAGGCGGGGG	+
11	11	0	7.59784e-42	1.82348e-40	3.64696e-40	18	AGTAGAGACGGGGTTTCA	AGTAGAGACGGGGTTTCA	+
12	12	0	2.25146e-37	5.40349e-36	1.0807e-35	16	AGGTCAGGAGTTCGAG	AGGTCAGGAGTTCGAG	+
12	24	-2	1.66627e-13	3.99904e-12	3.99904e-12	14	AGGTCAGGAGTTCGAG	GTCAGGAGTTCGAG	-
12	14	4	0.000618977	0.0148554	0.00990363	12	AGGTCAGGAGTTCGAG	CTTGAGCCCAGGAGTT	-
12	3	8	0.00466931	0.112063	0.0560317	12	AGGTCAGGAGTTCGAG	ATCACTTGAGCCCAGGAGTT	+
13	13	0	0	0	0	19	AGGCTGAGGCAGGAGGATC	AGGCTGAGGCAGGAGGATC	+
13	6	1	7.14539e-06	0.000171489	0.000171489	15	AGGCTGAGGCAGGAGGATC	GAGGCGGAGGCGGGGG	+
13	19	2	0.00308856	0.0741254	0.0494169	10	AGGCTGAGGCAGGAGGATC	GGAGGCTGAGGC	-
14	14	0	8.32303e-37	1.99753e-35	3.99505e-35	16	AACTCCTGGGCTCAAG	AACTCCTGGGCTCAAG	+
14	3	0	1.57483e-20	3.77959e-19	3.77959e-19	16	AACTCCTGGGCTCAAG	AACTCCTGGGCTCAAGTGAT	-
14	12	4	0.000715729	0.0171775	0.0114517	12	AACTCCTGGGCTCAAG	CTCGAACTCCTGACCT	-
14	24	4	0.00775658	0.186158	0.093079	10	AACTCCTGGGCTCAAG	CTCGAACTCCTGAC	+
15	15	0	0	0	0	16	AGCTATTTTTTTTATT	AGCTATTTTTTTTATT	+
15	1	2	2.28661e-08	5.48786e-07	5.48786e-07	16	AGCTATTTTTTTTATT	TTTTTTATTTTTTTTAGAGA	+
16	16	0	0	0	0	20	AAAAATTAGCCGGGCGTGGT	AAAAATTAGCCGGGCGTGGT	+
16	23	-1	0.00180505	0.0433213	0.0433213	8	AAAAATTAGCCGGGCGTGGT	AAAAATAC	+
16	18	-9	0.00584755	0.140341	0.0935608	11	AAAAATTAGCCGGGCGTGGT	CCGGGCGCGGTGGCTCAC	-
17	17	0	5.30873e-33	1.27409e-31	2.54819e-31	15	GCAGTGAGCCGAGAT	GCAGTGAGCCGAGAT	+
17	4	5	5.34456e-16	1.28269e-14	1.28269e-14	15	GCAGTGAGCCGAGAT	AGGTTGCAGTGAGCCGAGAT	-
18	18	0	4.76441e-44	1.14346e-42	2.28692e-42	18	GTGAGCCACCGCGCCCGG	GTGAGCCACCGCGCCCGG	+
18	7	4	8.59504e-05	0.00206281	0.00206281	12	GTGAGCCACCGCGCCCGG	AGGCGTGAGCCACCAC	+
19	19	0	2.30218e-33	5.52523e-32	1.10505e-31	12	GCCTCAGCCTCC	GCCTCAGCCTCC	+
19	10	7	0.000408461	0.00980306	0.0078625	12	GCCTCAGCCTCC	CCTCCCTTCCCCCTCCTCCC	-
19	6	5	0.000491406	0.0117938	0.0078625	11	GCCTCAGCCTCC	CCCCCGCCTCCGCCTC	-
19	20	6	0.00594372	0.142649	0.0713246	12	GCCTCAGCCTCC	GCCGCCGCCGCCGCCGCCGC	+
20	20	0	0	0	0	20	GCCGCCGCCGCCGCCGCCGC	GCCGCCGCCGCCGCCGCCGC	+
20	6	-1	1.77569e-05	0.000426167	0.000426167	16	GCCGCCGCCGCCGCCGCCGC	CCCCCGCCTCCGCCTC	-
21	21	0	4.39339e-22	1.05441e-20	2.10883e-20	8	CAGCCCCG	CAGCCCCG	+
22	22	0	3.85687e-36	9.25648e-35	1.8513e-34	14	AGTGCAGTGGCGCG	AGTGCAGTGGCGCG	+
23	23	0	2.26134e-17	5.42722e-16	1.08544e-15	8	AAAAATAC	AAAAATAC	+
24	24	0	1.05149e-34	2.52359e-33	5.04717e-33	14	CTCGAACTCCTGAC	CTCGAACTCCTGAC	+
24	12	0	5.41328e-13	1.29919e-11	1.29919e-11	14	CTCGAACTCCTGAC	CTCGAACTCCTGACCT	-

# Tomtom (Motif Comparison Tool): Version 5.4.1 compiled on Aug  1 2022 at 17:19:44
# The format of this file is described at https://meme-suite.org/meme/doc/tomtom-output-format.html.
# tomtom -verbosity 1 -text -thresh 0.1 /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_4_peaks/combined.meme /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d1_LPS_TRIM1_4_peaks/combined.meme