******************************************************************************** STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation ******************************************************************************** MEME version 5.4.1 (Release date: Sat Aug 21 19:23:23 2021 -0700) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey, "STREME: accurate and versatile sequence motif discovery", Bioinformatics, Mar. 24, 2021. ******************************************************************************** ALPHABET= ACGT strands: + - Background letter frequencies A 0.191 C 0.309 G 0.309 T 0.191 MOTIF 1-CCTGTAATCCCAGCWM STREME-1 letter-probability matrix: alength= 4 w= 16 nsites= 772 E= 4.5e-024 0.005829 0.934730 0.014536 0.044905 0.005829 0.927495 0.010195 0.056482 0.008723 0.004406 0.008748 0.978124 0.085432 0.013089 0.892756 0.008723 0.007276 0.021773 0.013089 0.957862 0.957861 0.007300 0.034799 0.000040 0.740611 0.002959 0.249154 0.007276 0.002934 0.017431 0.004406 0.975229 0.004381 0.941968 0.014536 0.039115 0.002934 0.934731 0.007301 0.055034 0.011617 0.917356 0.001512 0.069515 0.981018 0.001512 0.008748 0.008723 0.059377 0.007301 0.921705 0.011617 0.013064 0.939073 0.013089 0.034773 0.479752 0.018878 0.010195 0.491175 0.482492 0.450831 0.024667 0.042010 MOTIF 2-GCCTCRGCCTCCCRA STREME-2 letter-probability matrix: alength= 4 w= 15 nsites= 844 E= 1.7e-019 0.241521 0.013079 0.725832 0.019568 0.007849 0.904808 0.002662 0.084681 0.001338 0.955598 0.007871 0.035193 0.000036 0.000058 0.000058 0.999848 0.000036 0.839638 0.000058 0.160268 0.562906 0.026103 0.346600 0.064391 0.054731 0.006569 0.928247 0.010453 0.005244 0.912622 0.007871 0.074263 0.002640 0.936066 0.010475 0.050819 0.009151 0.005266 0.001360 0.984223 0.005244 0.959505 0.005267 0.029985 0.005244 0.942577 0.006569 0.045610 0.022172 0.782340 0.010475 0.185013 0.608523 0.035216 0.330182 0.026079 0.855300 0.016985 0.126377 0.001338 MOTIF 3-CAGCCTGGSCAACATR STREME-3 letter-probability matrix: alength= 4 w= 16 nsites= 649 E= 8.2e-015 0.001730 0.954367 0.003443 0.040460 0.996436 0.000075 0.000075 0.003414 0.032039 0.001759 0.868479 0.097723 0.006782 0.957736 0.008494 0.026987 0.008466 0.962788 0.001759 0.026988 0.015201 0.003443 0.003443 0.977914 0.029370 0.001759 0.968825 0.000046 0.112887 0.011862 0.866785 0.008465 0.028672 0.478674 0.467350 0.025304 0.008466 0.807824 0.005127 0.178584 0.808756 0.005127 0.181020 0.005098 0.981281 0.001759 0.015230 0.001730 0.021937 0.903851 0.006811 0.067401 0.967811 0.003443 0.027016 0.001730 0.090983 0.094382 0.248406 0.566229 0.367942 0.008494 0.606679 0.016885 MOTIF 4-WTTTTTWKTAGAGACRGGGT STREME-4 letter-probability matrix: alength= 4 w= 20 nsites= 679 E= 6.7e-014 0.585851 0.022534 0.035369 0.356246 0.041759 0.009698 0.033765 0.914778 0.022506 0.019325 0.014511 0.943658 0.027320 0.014511 0.014511 0.943658 0.017693 0.014511 0.025742 0.942053 0.020902 0.035369 0.017721 0.926009 0.526487 0.008094 0.044996 0.420424 0.040155 0.017720 0.619571 0.322553 0.009671 0.016116 0.009698 0.964515 0.659654 0.008094 0.049810 0.282442 0.033738 0.017720 0.930849 0.017693 0.964515 0.009698 0.025742 0.000044 0.033737 0.011303 0.942081 0.012880 0.938844 0.000072 0.036973 0.024111 0.019297 0.662856 0.009698 0.308148 0.394785 0.008094 0.579428 0.017693 0.099525 0.011303 0.885919 0.003253 0.261585 0.011303 0.698188 0.028924 0.044969 0.016116 0.895551 0.043364 0.000044 0.016116 0.028951 0.954889 MOTIF 5-AAAATTAGCYRGGCRTGGTG STREME-5 letter-probability matrix: alength= 4 w= 20 nsites= 461 E= 3.4e-013 0.947246 0.018358 0.022922 0.011473 0.924425 0.020640 0.034333 0.020601 0.931272 0.022922 0.018358 0.027448 0.903886 0.032051 0.041179 0.022884 0.047986 0.032051 0.029769 0.890194 0.036576 0.045743 0.020640 0.897040 0.901604 0.016076 0.077692 0.004627 0.032012 0.016076 0.931310 0.020602 0.002345 0.947285 0.006948 0.043422 0.011473 0.641443 0.011512 0.335572 0.335579 0.011512 0.611769 0.041140 0.070808 0.000102 0.917617 0.011473 0.050269 0.009230 0.935874 0.004627 0.025166 0.696223 0.011512 0.267099 0.328728 0.020641 0.618620 0.032012 0.013755 0.091385 0.006948 0.887912 0.079936 0.009230 0.899361 0.011473 0.047987 0.016077 0.915335 0.020602 0.004627 0.016076 0.004666 0.974631 0.043422 0.009230 0.935874 0.011473 MOTIF 6-AACTCCTGRSCTCAAGYGA STREME-6 letter-probability matrix: alength= 4 w= 19 nsites= 509 E= 5.3e-013 0.894144 0.004797 0.098648 0.002411 0.711133 0.248812 0.018874 0.021181 0.000065 0.964573 0.000105 0.035258 0.011796 0.044683 0.009490 0.934031 0.002411 0.943457 0.028259 0.025873 0.002411 0.957534 0.004797 0.035258 0.025873 0.150269 0.007143 0.816715 0.105647 0.009490 0.870722 0.014142 0.497619 0.004797 0.485788 0.011796 0.035258 0.518779 0.410703 0.035260 0.009450 0.701787 0.011836 0.276927 0.000065 0.021221 0.007143 0.971571 0.004757 0.957534 0.004797 0.032912 0.964533 0.018875 0.016528 0.000065 0.654714 0.009490 0.319308 0.016488 0.032913 0.016529 0.943455 0.007103 0.028220 0.323890 0.021221 0.626670 0.187765 0.030605 0.751064 0.030566 0.948109 0.009490 0.030606 0.011796 MOTIF 7-GRGYGCRGTGGCDC STREME-7 letter-probability matrix: alength= 4 w= 14 nsites= 505 E= 1.0e-010 0.161872 0.020047 0.791424 0.026657 0.477648 0.013397 0.506677 0.002277 0.013360 0.000099 0.986481 0.000061 0.000061 0.358160 0.000099 0.641680 0.204920 0.000099 0.789567 0.005414 0.000061 0.811148 0.000099 0.188692 0.651466 0.000099 0.348374 0.000061 0.082074 0.000099 0.917766 0.000061 0.000061 0.000099 0.000099 0.999741 0.013359 0.000099 0.986481 0.000061 0.000061 0.000099 0.999779 0.000061 0.006711 0.833527 0.000099 0.159664 0.255036 0.011181 0.283849 0.449933 0.020008 0.795846 0.020048 0.164098 MOTIF 8-TGCAGTGAGCYRAGATC STREME-8 letter-probability matrix: alength= 4 w= 17 nsites= 296 E= 5.6e-008 0.003934 0.000171 0.011656 0.984239 0.049877 0.003999 0.926876 0.019248 0.003934 0.968990 0.000171 0.026905 0.922982 0.011656 0.046113 0.019248 0.034562 0.019313 0.946019 0.000105 0.003934 0.026971 0.015485 0.953610 0.065191 0.003999 0.930705 0.000105 0.976582 0.000171 0.019313 0.003934 0.038392 0.003999 0.949846 0.007763 0.007763 0.946019 0.007828 0.038391 0.007763 0.635853 0.026971 0.329414 0.344711 0.007828 0.639699 0.007763 0.766009 0.000171 0.011656 0.222164 0.038391 0.011656 0.934532 0.015420 0.926811 0.003999 0.038456 0.030734 0.003934 0.053770 0.015485 0.926811 0.019248 0.639712 0.072914 0.268125 MOTIF 9-CCCCRVCCCC STREME-9 letter-probability matrix: alength= 4 w= 10 nsites= 2073 E= 5.6e-007 0.000062 0.999776 0.000100 0.000062 0.000062 0.999776 0.000100 0.000062 0.000062 0.999776 0.000100 0.000062 0.000062 0.908619 0.071750 0.019568 0.437368 0.000100 0.398241 0.164292 0.233861 0.447818 0.224746 0.093575 0.063067 0.922201 0.014671 0.000062 0.000062 0.954877 0.026063 0.018998 0.000062 0.999776 0.000100 0.000062 0.152735 0.504852 0.240480 0.101934 MOTIF 10-GGAGAATCRCTTGAA STREME-10 letter-probability matrix: alength= 4 w= 15 nsites= 193 E= 3.1e-005 0.011776 0.058339 0.871645 0.058240 0.075663 0.006067 0.906494 0.011776 0.952857 0.000259 0.011875 0.035009 0.023392 0.000259 0.976189 0.000160 0.819270 0.000259 0.180311 0.000160 0.993514 0.000259 0.006067 0.000160 0.000160 0.058339 0.000259 0.941242 0.000160 0.621857 0.139672 0.238311 0.331268 0.035108 0.621848 0.011776 0.000160 0.958765 0.000259 0.040816 0.011776 0.040915 0.099015 0.848294 0.005968 0.000259 0.000259 0.993514 0.035008 0.011875 0.952957 0.000160 0.970283 0.000259 0.023491 0.005968 0.778614 0.017683 0.203543 0.000160 MOTIF 11-AASATGGCGRM STREME-11 letter-probability matrix: alength= 4 w= 11 nsites= 204 E= 2.1e-003 0.999231 0.000294 0.000294 0.000181 0.939963 0.059562 0.000294 0.000181 0.053141 0.383298 0.563380 0.000181 0.999231 0.000294 0.000294 0.000181 0.000181 0.000294 0.000294 0.999231 0.000181 0.000294 0.999344 0.000181 0.000181 0.000294 0.946661 0.052864 0.000181 0.755620 0.000294 0.243905 0.039693 0.110491 0.789279 0.060537 0.327767 0.033221 0.625660 0.013352 0.331699 0.572897 0.000294 0.095111 MOTIF 12-AGGAGTTCRAGAC STREME-12 letter-probability matrix: alength= 4 w= 13 nsites= 150 E= 1.7e-002 0.935790 0.000353 0.047818 0.016039 0.047687 0.008263 0.920100 0.023950 0.079328 0.008263 0.912191 0.000218 0.935791 0.016174 0.039907 0.008129 0.043054 0.016174 0.924732 0.016039 0.166354 0.031996 0.008263 0.793386 0.008129 0.039906 0.000353 0.951612 0.008129 0.747365 0.047817 0.196689 0.435364 0.039907 0.524511 0.000218 0.999077 0.000353 0.000353 0.000218 0.031861 0.024085 0.935926 0.008129 0.967433 0.000353 0.031996 0.000218 0.008129 0.928015 0.016175 0.047682 MOTIF 13-GCCGCCGCCGCCGC STREME-13 letter-probability matrix: alength= 4 w= 14 nsites= 410 E= 2.4e-002 0.045734 0.016961 0.937208 0.000097 0.038403 0.883155 0.014197 0.064245 0.079190 0.831304 0.010491 0.079015 0.048525 0.015552 0.935826 0.000097 0.003606 0.985612 0.000156 0.010625 0.032117 0.858719 0.054926 0.054238 0.053692 0.000156 0.900999 0.045153 0.010625 0.923765 0.000156 0.065454 0.014751 0.975308 0.009844 0.000097 0.059762 0.015552 0.924590 0.000097 0.007116 0.971574 0.000156 0.021154 0.000097 0.969939 0.001660 0.028304 0.023628 0.016113 0.871450 0.088809 0.019231 0.955315 0.000156 0.025298 MOTIF 14-ACTTCCGG STREME-14 letter-probability matrix: alength= 4 w= 8 nsites= 104 E= 7.1e-002 0.926445 0.028100 0.028100 0.017355 0.017355 0.937191 0.028100 0.017355 0.017355 0.028100 0.028100 0.926445 0.017355 0.028100 0.028100 0.926445 0.017355 0.937191 0.028100 0.017355 0.017355 0.937191 0.028100 0.017355 0.017355 0.028100 0.937191 0.017355 0.017355 0.028100 0.937191 0.017355 MOTIF 15-GCCTCAGTTTCCCCHTCTGT STREME-15 letter-probability matrix: alength= 4 w= 20 nsites= 66 E= 1.4e-001 0.084723 0.000627 0.872096 0.042555 0.042555 0.801816 0.014683 0.140946 0.014443 0.872096 0.028739 0.084723 0.000387 0.028739 0.056851 0.914024 0.028499 0.872096 0.028739 0.070667 0.871856 0.042795 0.070906 0.014443 0.042556 0.042795 0.872095 0.042555 0.070667 0.042795 0.000627 0.885912 0.014443 0.056851 0.141187 0.787519 0.014443 0.042795 0.070906 0.871856 0.028499 0.675312 0.113074 0.183115 0.056611 0.815872 0.028739 0.098779 0.098779 0.576921 0.056851 0.267450 0.098779 0.773704 0.056851 0.070667 0.351785 0.239578 0.113075 0.295562 0.098779 0.141186 0.113074 0.646961 0.056611 0.787760 0.014683 0.140946 0.056611 0.141186 0.127130 0.675073 0.084723 0.141186 0.703424 0.070667 0.098779 0.183354 0.042795 0.675073 MOTIF 16-CGGGGTCT STREME-16 letter-probability matrix: alength= 4 w= 8 nsites= 1233 E= 1.5e-001 0.048134 0.800411 0.004329 0.147125 0.036005 0.080560 0.839092 0.044343 0.005474 0.001879 0.986948 0.005699 0.003722 0.059483 0.919186 0.017608 0.029271 0.000472 0.924217 0.046040 0.087765 0.000472 0.000472 0.911291 0.016307 0.958390 0.002377 0.022926 0.072693 0.111019 0.086985 0.729304 MOTIF 17-AAAAAAAAAVAAARAAAAA STREME-17 letter-probability matrix: alength= 4 w= 19 nsites= 117 E= 2.0e-001 0.959761 0.000436 0.000436 0.039367 0.938233 0.031739 0.010211 0.019818 0.924972 0.045001 0.019984 0.010043 0.920665 0.029759 0.029759 0.019818 0.842465 0.088410 0.029759 0.039366 0.588334 0.059082 0.244797 0.107787 0.989085 0.010210 0.000436 0.000269 0.989085 0.010210 0.000436 0.000269 0.969536 0.000436 0.019985 0.010043 0.367825 0.211170 0.274121 0.146884 0.959762 0.000436 0.019984 0.019818 0.975254 0.000436 0.024041 0.000269 0.920664 0.039533 0.039534 0.000269 0.529935 0.084098 0.287954 0.098013 0.784649 0.088410 0.097349 0.029592 0.853904 0.082688 0.000436 0.062971 0.969012 0.000436 0.010734 0.019818 0.679348 0.059084 0.153781 0.107787 0.928818 0.010210 0.041154 0.019818 MOTIF 18-CGTGAGCCACC STREME-18 letter-probability matrix: alength= 4 w= 11 nsites= 113 E= 2.2e-001 0.000256 0.846392 0.000415 0.152937 0.255252 0.000415 0.744077 0.000256 0.000256 0.000415 0.000415 0.998914 0.018856 0.037617 0.943271 0.000256 0.998914 0.000415 0.000415 0.000256 0.009556 0.050776 0.689815 0.249853 0.000256 0.980474 0.009714 0.009556 0.009556 0.878173 0.028314 0.083957 0.967154 0.000415 0.000415 0.032016 0.000256 0.999073 0.000415 0.000256 0.065357 0.793359 0.010819 0.130465 MOTIF 19-AATAAATGA STREME-19 letter-probability matrix: alength= 4 w= 9 nsites= 115 E= 2.2e-001 0.880294 0.016328 0.063230 0.040148 0.927199 0.016328 0.019038 0.037435 0.000430 0.009211 0.000697 0.989661 0.647566 0.044322 0.147960 0.160153 0.983477 0.005379 0.006490 0.004655 0.948049 0.016328 0.025695 0.009928 0.000430 0.009146 0.000697 0.989726 0.108307 0.004216 0.871415 0.016061 0.963776 0.035097 0.000697 0.000430 MOTIF 20-CCTGTAATCC STREME-20 letter-probability matrix: alength= 4 w= 10 nsites= 99 E= 2.7e-001 0.028607 0.970375 0.000629 0.000389 0.006244 0.978630 0.000629 0.014497 0.000389 0.028847 0.014738 0.956026 0.040320 0.000629 0.958663 0.000389 0.000389 0.000629 0.000629 0.998353 0.998353 0.000629 0.000629 0.000389 0.786426 0.000629 0.212556 0.000389 0.000389 0.092931 0.000629 0.906051 0.070937 0.899827 0.000629 0.028607 0.014497 0.871602 0.000629 0.113271 MOTIF 21-CTAAAAATACA STREME-21 letter-probability matrix: alength= 4 w= 11 nsites= 51 E= 2.7e-001 0.027035 0.971067 0.001173 0.000725 0.000725 0.001173 0.001173 0.996929 0.996929 0.001173 0.001173 0.000725 0.917997 0.001173 0.080105 0.000725 0.996929 0.001173 0.001173 0.000725 0.880764 0.001173 0.012093 0.105970 0.839066 0.053795 0.106414 0.000725 0.000725 0.001173 0.001173 0.996929 0.996929 0.001173 0.001173 0.000725 0.000725 0.865824 0.053795 0.079657 0.917994 0.001173 0.080108 0.000725 MOTIF 22-GAGAC STREME-22 letter-probability matrix: alength= 4 w= 5 nsites= 2617 E= 4.3e-001 0.017355 0.028100 0.937191 0.017355 0.926445 0.028100 0.028100 0.017355 0.017355 0.028100 0.937191 0.017355 0.926445 0.028100 0.028100 0.017355 0.017355 0.937191 0.028100 0.017355 MOTIF 23-CCCGGCCC STREME-23 letter-probability matrix: alength= 4 w= 8 nsites= 431 E= 4.6e-001 0.017355 0.937191 0.028100 0.017355 0.017355 0.937191 0.028100 0.017355 0.017355 0.937191 0.028100 0.017355 0.017355 0.028100 0.937191 0.017355 0.017355 0.028100 0.937191 0.017355 0.017355 0.937191 0.028100 0.017355 0.017355 0.937191 0.028100 0.017355 0.017355 0.937191 0.028100 0.017355 MOTIF 24-CCTCCTCCTCCTCCTC STREME-24 letter-probability matrix: alength= 4 w= 16 nsites= 309 E= 4.9e-001 0.000077 0.927393 0.008470 0.064060 0.000077 0.771607 0.114182 0.114134 0.083533 0.112554 0.087518 0.716394 0.000077 0.950121 0.026316 0.023486 0.000077 0.752134 0.189292 0.058496 0.097443 0.019597 0.199477 0.683483 0.000077 0.837219 0.041852 0.120852 0.000077 0.722006 0.115336 0.162581 0.077497 0.130401 0.101427 0.690676 0.019550 0.807772 0.036289 0.136389 0.000077 0.738225 0.175383 0.086315 0.025114 0.052980 0.240050 0.681857 0.008422 0.752607 0.075235 0.163735 0.016768 0.820527 0.151500 0.011204 0.019550 0.164937 0.002906 0.812607 0.000077 0.954058 0.000124 0.045741 MOTIF 25-GTAGCTGGGAY STREME-25 letter-probability matrix: alength= 4 w= 11 nsites= 36 E= 5.4e-001 0.001014 0.001643 0.996329 0.001014 0.001014 0.001643 0.001643 0.995701 0.995701 0.001643 0.001643 0.001014 0.001014 0.001643 0.996329 0.001014 0.037847 0.959496 0.001643 0.001014 0.001014 0.001643 0.001643 0.995701 0.001014 0.001643 0.959496 0.037847 0.001014 0.038475 0.922663 0.037847 0.037847 0.038475 0.922663 0.001014 0.995701 0.001643 0.001643 0.001014 0.001014 0.591057 0.001643 0.406286 MOTIF 26-CAGGAAGC STREME-26 letter-probability matrix: alength= 4 w= 8 nsites= 251 E= 6.0e-001 0.017355 0.937191 0.028100 0.017355 0.926445 0.028100 0.028100 0.017355 0.017355 0.028100 0.937191 0.017355 0.017355 0.028100 0.937191 0.017355 0.926445 0.028100 0.028100 0.017355 0.926445 0.028100 0.028100 0.017355 0.017355 0.028100 0.937191 0.017355 0.017355 0.937191 0.028100 0.017355 MOTIF 27-CTCGTGATCYGCCC STREME-27 letter-probability matrix: alength= 4 w= 14 nsites= 78 E= 1.1e+000 0.000366 0.998674 0.000593 0.000366 0.319742 0.027207 0.000593 0.652457 0.133441 0.546228 0.200201 0.120130 0.120130 0.000593 0.865603 0.013673 0.000366 0.027207 0.027207 0.945219 0.000366 0.027207 0.958753 0.013673 0.998447 0.000593 0.000593 0.000366 0.000366 0.107050 0.000593 0.891990 0.000366 0.945446 0.040514 0.013673 0.000366 0.506304 0.040514 0.452815 0.133437 0.000593 0.785761 0.080208 0.040288 0.945445 0.000593 0.013673 0.000366 0.998674 0.000593 0.000366 0.013673 0.652687 0.067128 0.266511 MOTIF 28-AGGCTGAGGCAGGAGGA STREME-28 letter-probability matrix: alength= 4 w= 17 nsites= 69 E= 1.1e+000 0.843207 0.017965 0.069561 0.069267 0.034870 0.017965 0.929492 0.017672 0.034870 0.017965 0.912294 0.034870 0.000474 0.963889 0.035164 0.000474 0.034870 0.069561 0.035164 0.860405 0.000474 0.017965 0.981087 0.000474 0.826008 0.035164 0.103957 0.034870 0.086466 0.000767 0.895095 0.017672 0.069267 0.035164 0.877897 0.017672 0.017672 0.791905 0.086759 0.103664 0.705619 0.069561 0.172751 0.052069 0.103665 0.069561 0.791904 0.034870 0.069267 0.017965 0.895095 0.017672 0.740016 0.103957 0.017965 0.138061 0.034870 0.035164 0.895095 0.034870 0.310055 0.017965 0.654308 0.017672 0.912000 0.000767 0.069561 0.017672 MOTIF 29-GTGAAACYCCRTCTCTACWA STREME-29 letter-probability matrix: alength= 4 w= 20 nsites= 45 E= 1.1e+000 0.000584 0.022157 0.913040 0.064218 0.085430 0.064580 0.022157 0.827833 0.021796 0.022157 0.934252 0.021796 0.870256 0.085791 0.043369 0.000584 0.849045 0.000946 0.128214 0.021796 0.997524 0.000946 0.000946 0.000584 0.043007 0.828195 0.000946 0.127852 0.043007 0.573659 0.043369 0.339966 0.085430 0.828195 0.022157 0.064218 0.043007 0.616080 0.043369 0.297544 0.488449 0.043369 0.425175 0.043007 0.043007 0.085791 0.043369 0.827833 0.127852 0.849406 0.000946 0.021796 0.043007 0.107003 0.022157 0.827833 0.085430 0.849406 0.000946 0.064218 0.212698 0.128214 0.064580 0.594508 0.742988 0.043369 0.107003 0.106641 0.170275 0.658504 0.085791 0.085430 0.318755 0.064580 0.128214 0.488451 0.891467 0.043369 0.043369 0.021796 MOTIF 30-GCAGCAGCVGCDGCGSSGSC STREME-30 letter-probability matrix: alength= 4 w= 20 nsites= 373 E= 1.3e+000 0.000081 0.053298 0.946539 0.000081 0.003035 0.958354 0.038530 0.000081 0.641033 0.038530 0.205162 0.115275 0.038479 0.000132 0.961308 0.000081 0.014850 0.919956 0.062159 0.003035 0.596727 0.085789 0.281958 0.035526 0.082785 0.062159 0.840206 0.014850 0.005989 0.865564 0.128366 0.000081 0.401784 0.290819 0.221659 0.085738 0.026665 0.091696 0.869743 0.011896 0.003035 0.875651 0.088742 0.032572 0.345664 0.165538 0.308541 0.180257 0.068016 0.127140 0.775225 0.029618 0.069242 0.623361 0.265964 0.041433 0.209794 0.165538 0.568466 0.056201 0.100507 0.304362 0.562559 0.032572 0.044387 0.562559 0.348667 0.044387 0.192072 0.186214 0.479856 0.141859 0.056201 0.327991 0.577328 0.038479 0.000081 0.730920 0.260057 0.008942 MOTIF 31-CYCGGGGC STREME-31 letter-probability matrix: alength= 4 w= 8 nsites= 889 E= 1.4e+000 0.001434 0.996985 0.000977 0.000603 0.004165 0.623041 0.000977 0.371816 0.000603 0.997816 0.000977 0.000603 0.000603 0.000977 0.997816 0.000603 0.000603 0.000977 0.997199 0.001220 0.000603 0.000977 0.984111 0.014308 0.207266 0.000977 0.716963 0.074794 0.000603 0.997816 0.000977 0.000603 MOTIF 32-ACGTSACS STREME-32 letter-probability matrix: alength= 4 w= 8 nsites= 133 E= 1.6e+000 0.997895 0.000804 0.000804 0.000497 0.000497 0.998202 0.000804 0.000497 0.000497 0.000804 0.998202 0.000497 0.000497 0.000804 0.000804 0.997895 0.000497 0.365469 0.549953 0.084082 0.997895 0.000804 0.000804 0.000497 0.023871 0.744942 0.000804 0.230382 0.000497 0.488064 0.281454 0.229985 MOTIF 33-CTTGCTCTGTCRCCC STREME-33 letter-probability matrix: alength= 4 w= 15 nsites= 76 E= 2.2e+000 0.000377 0.943951 0.014281 0.041391 0.014048 0.041625 0.000610 0.943717 0.014048 0.301385 0.027953 0.656614 0.137093 0.192012 0.670519 0.000377 0.014048 0.943951 0.000610 0.041391 0.000377 0.014281 0.000610 0.984733 0.055063 0.725207 0.150996 0.068734 0.000377 0.014281 0.000610 0.984733 0.014048 0.000610 0.957623 0.027719 0.000377 0.082639 0.000610 0.916375 0.000377 0.711534 0.137324 0.150765 0.506226 0.150997 0.328729 0.014048 0.000377 0.848251 0.000610 0.150763 0.000377 0.875594 0.000610 0.123420 0.287479 0.629506 0.000610 0.082405 MOTIF 34-YGCGCATGCGCR STREME-34 letter-probability matrix: alength= 4 w= 12 nsites= 98 E= 1.2e+001 0.058845 0.321391 0.128228 0.491536 0.066593 0.000591 0.932452 0.000365 0.036227 0.923081 0.040327 0.000365 0.040101 0.000591 0.958943 0.000365 0.000365 0.998680 0.000591 0.000365 0.671757 0.199607 0.099841 0.028795 0.028795 0.099841 0.199607 0.671757 0.000365 0.000591 0.998680 0.000365 0.000365 0.958943 0.000591 0.040101 0.000365 0.040327 0.923081 0.036227 0.000365 0.932452 0.000591 0.066593 0.491536 0.128228 0.321391 0.058845 MOTIF 35-AAAATTAGCYRGGC STREME-35 letter-probability matrix: alength= 4 w= 14 nsites= 43 E= 3.1e+001 0.972861 0.001084 0.001084 0.024972 0.997163 0.001084 0.001084 0.000669 0.899953 0.001084 0.049689 0.049275 0.948558 0.001084 0.001084 0.049275 0.000669 0.025386 0.001084 0.972861 0.000669 0.001084 0.049689 0.948558 0.997163 0.001084 0.001084 0.000669 0.073577 0.001084 0.900367 0.024972 0.000669 0.948972 0.001084 0.049275 0.000669 0.560055 0.001084 0.438192 0.486731 0.001084 0.462911 0.049275 0.073577 0.001084 0.924670 0.000669 0.073577 0.049689 0.876065 0.000669 0.000669 0.778851 0.049689 0.170790 ******************************************************************************** Stopped because 3 consecutive motifs exceeded the p-value threshold (0.05). ******************************************************************************** COMMAND: streme --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d0_TRIM1_1_peaks/streme_out -dna --p /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d0_TRIM1_1_peaks/seqs-centered --minw 5 --maxw 20 --order 2 ******************************************************************************** CPU: cn45 ******************************************************************************** FINALTIME: 1041.67 seconds ********************************************************************************