******************************************************************************** STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation ******************************************************************************** MEME version 5.4.1 (Release date: Sat Aug 21 19:23:23 2021 -0700) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey, "STREME: accurate and versatile sequence motif discovery", Bioinformatics, Mar. 24, 2021. ******************************************************************************** ALPHABET= ACGT strands: + - Background letter frequencies A 0.198 C 0.302 G 0.302 T 0.198 MOTIF 1-AGGCYGAGGCRGGAGRAT STREME-1 letter-probability matrix: alength= 4 w= 18 nsites= 712 E= 1.2e-019 0.956370 0.006275 0.026448 0.010907 0.041943 0.007827 0.940875 0.009355 0.043495 0.012482 0.934668 0.009355 0.010907 0.950186 0.007827 0.031080 0.009355 0.353906 0.004723 0.632016 0.176960 0.006275 0.813617 0.003148 0.985854 0.003171 0.009378 0.001596 0.052807 0.006275 0.937771 0.003148 0.041943 0.000068 0.947082 0.010907 0.023321 0.711194 0.014034 0.251451 0.566838 0.015586 0.392704 0.024873 0.055910 0.023346 0.908286 0.012459 0.062118 0.009378 0.923803 0.004700 0.565283 0.221993 0.014034 0.198690 0.144370 0.009379 0.833793 0.012459 0.341809 0.007827 0.648768 0.001596 0.962577 0.003171 0.020241 0.014010 0.009355 0.045070 0.017138 0.928437 MOTIF 2-CTGTAATCCCAGCWMYT STREME-2 letter-probability matrix: alength= 4 w= 17 nsites= 749 E= 8.9e-018 0.002975 0.932392 0.010329 0.054304 0.008840 0.007396 0.007396 0.976368 0.076298 0.008862 0.910398 0.004441 0.002975 0.026460 0.008863 0.961703 0.936772 0.016195 0.044059 0.002975 0.743074 0.002997 0.246556 0.007374 0.005907 0.010329 0.005930 0.977834 0.008840 0.935330 0.007396 0.048434 0.005907 0.922129 0.004463 0.067500 0.008840 0.933863 0.000064 0.057233 0.967569 0.000064 0.013262 0.019105 0.057233 0.010329 0.929464 0.002975 0.017638 0.907468 0.020594 0.054300 0.489164 0.017661 0.013262 0.479914 0.482847 0.471589 0.017661 0.027904 0.005907 0.474070 0.008862 0.511160 0.011773 0.022060 0.011795 0.954371 MOTIF 3-ACCAGCCTGGSCAACATR STREME-3 letter-probability matrix: alength= 4 w= 18 nsites= 636 E= 8.9e-018 0.663148 0.006944 0.015530 0.314378 0.010353 0.946592 0.010378 0.032677 0.000049 0.944874 0.005227 0.049851 0.989498 0.001792 0.006944 0.001766 0.029243 0.000075 0.895068 0.075614 0.006918 0.950025 0.008661 0.034395 0.012070 0.958612 0.005227 0.024091 0.008635 0.015530 0.000075 0.975760 0.048133 0.008661 0.938005 0.005201 0.104816 0.001792 0.883040 0.010353 0.051567 0.458803 0.465539 0.024091 0.018939 0.788560 0.017248 0.175253 0.776504 0.008661 0.204483 0.010353 0.963738 0.001792 0.029269 0.005201 0.024091 0.886483 0.015530 0.073896 0.936262 0.020682 0.037855 0.005201 0.096222 0.099682 0.247424 0.556672 0.393375 0.010379 0.577307 0.018939 MOTIF 4-CTCRAACTCCTGRSCTCAAG STREME-4 letter-probability matrix: alength= 4 w= 20 nsites= 618 E= 8.9e-018 0.012798 0.910592 0.016468 0.060142 0.001873 0.005542 0.016467 0.976118 0.007336 0.763091 0.027393 0.202181 0.236778 0.191279 0.468093 0.103850 0.808586 0.009184 0.173074 0.009156 0.613743 0.282331 0.020109 0.083817 0.003694 0.959757 0.003721 0.032828 0.016440 0.021930 0.001900 0.959729 0.003694 0.947011 0.011005 0.038291 0.009156 0.921518 0.005542 0.063783 0.007336 0.178538 0.012826 0.801301 0.111131 0.009184 0.872349 0.007336 0.500843 0.005542 0.482637 0.010977 0.054679 0.475379 0.435293 0.034649 0.014619 0.710282 0.009184 0.265915 0.005515 0.012826 0.005542 0.976118 0.003694 0.947011 0.005542 0.043754 0.875963 0.014647 0.105697 0.003694 0.639220 0.025572 0.213150 0.122058 0.065605 0.007363 0.916055 0.010977 MOTIF 5-WTTTTTWGTAGAGAYRGGG STREME-5 letter-probability matrix: alength= 4 w= 19 nsites= 544 E= 7.6e-013 0.625953 0.000087 0.032070 0.341890 0.044034 0.026073 0.026073 0.903820 0.018047 0.016079 0.014080 0.951795 0.014050 0.006084 0.010082 0.969785 0.008053 0.004085 0.020076 0.967786 0.018047 0.016079 0.012081 0.953794 0.583977 0.008083 0.040066 0.367874 0.042034 0.008083 0.683954 0.265929 0.008053 0.036068 0.016079 0.939801 0.717904 0.000087 0.036069 0.245940 0.036038 0.022076 0.939831 0.002056 0.991773 0.004085 0.004085 0.000057 0.022045 0.010082 0.957821 0.010052 0.961789 0.004085 0.018078 0.016048 0.008053 0.645907 0.014080 0.331961 0.335934 0.008083 0.645931 0.010052 0.106002 0.004085 0.881860 0.008053 0.243943 0.008083 0.727928 0.020046 0.054029 0.010082 0.903850 0.032040 MOTIF 6-AAATTAGCYRGGCRTGGTGG STREME-6 letter-probability matrix: alength= 4 w= 20 nsites= 435 E= 3.0e-008 0.952352 0.010079 0.012572 0.024997 0.942382 0.027527 0.007586 0.022504 0.907486 0.010079 0.037498 0.044938 0.024997 0.035005 0.020049 0.919948 0.044938 0.037498 0.020049 0.897514 0.904993 0.007586 0.077379 0.010041 0.029982 0.022542 0.919986 0.027490 0.007549 0.944912 0.005094 0.042445 0.020012 0.551034 0.000109 0.428846 0.349068 0.007586 0.623333 0.020012 0.064879 0.007586 0.919986 0.007549 0.057402 0.025035 0.907522 0.010042 0.017519 0.658248 0.012572 0.311661 0.339100 0.027527 0.620838 0.012534 0.012534 0.057438 0.000109 0.929919 0.077342 0.012572 0.892567 0.017519 0.042446 0.017557 0.932449 0.007549 0.012534 0.025035 0.000109 0.962323 0.044938 0.000109 0.944912 0.010041 0.054908 0.000109 0.922478 0.022504 MOTIF 7-GTTGCAGTGAGCYRAGATC STREME-7 letter-probability matrix: alength= 4 w= 19 nsites= 264 E= 3.6e-006 0.059152 0.080300 0.835129 0.025420 0.008553 0.232095 0.004400 0.754952 0.012770 0.017050 0.004400 0.965780 0.076018 0.008617 0.898379 0.016986 0.029636 0.919462 0.000184 0.050718 0.906748 0.004400 0.067649 0.021203 0.050718 0.017050 0.927895 0.004337 0.016986 0.017050 0.025483 0.940481 0.054935 0.008617 0.927895 0.008553 0.953130 0.004400 0.029699 0.012770 0.038069 0.004400 0.948977 0.008553 0.008553 0.936328 0.008617 0.046502 0.029637 0.603201 0.033916 0.333247 0.379626 0.029699 0.577904 0.012770 0.776036 0.004400 0.017050 0.202514 0.025420 0.021266 0.940544 0.012770 0.948914 0.000184 0.033916 0.016986 0.008553 0.029699 0.017050 0.944697 0.016986 0.636944 0.109814 0.236256 MOTIF 8-GCGCCACTGCAC STREME-8 letter-probability matrix: alength= 4 w= 12 nsites= 190 E= 8.2e-006 0.269748 0.010593 0.698777 0.020882 0.018502 0.637354 0.036512 0.307632 0.260376 0.005410 0.720185 0.014030 0.005331 0.968377 0.010593 0.015699 0.015698 0.963194 0.010593 0.010515 0.999400 0.000226 0.000226 0.000148 0.000148 0.853323 0.006408 0.140121 0.000148 0.010593 0.031329 0.957930 0.041617 0.000226 0.958009 0.000148 0.000148 0.952826 0.000226 0.046800 0.999400 0.000226 0.000226 0.000148 0.000148 0.983927 0.000226 0.015699 MOTIF 9-CCCCGMCCCCR STREME-9 letter-probability matrix: alength= 4 w= 11 nsites= 1509 E= 7.9e-005 0.008349 0.984930 0.000064 0.006658 0.006367 0.743633 0.247061 0.002939 0.020835 0.890297 0.036186 0.052682 0.037581 0.954337 0.008041 0.000042 0.283850 0.000064 0.654727 0.061360 0.329013 0.569764 0.025874 0.075349 0.024705 0.921838 0.050003 0.003453 0.001504 0.776887 0.209989 0.011620 0.000649 0.940728 0.027351 0.031273 0.014315 0.795812 0.114611 0.075263 0.481301 0.016103 0.400626 0.101969 MOTIF 10-GCGTGAGCCACYGYG STREME-10 letter-probability matrix: alength= 4 w= 15 nsites= 273 E= 2.6e-003 0.033746 0.022866 0.929658 0.013730 0.031864 0.745645 0.022866 0.199625 0.246842 0.004731 0.721096 0.027331 0.013730 0.018332 0.018332 0.949606 0.018264 0.009265 0.967809 0.004663 0.972274 0.009265 0.013798 0.004663 0.018264 0.009265 0.972342 0.000129 0.018264 0.949674 0.004731 0.027331 0.013730 0.958741 0.000198 0.027331 0.967740 0.009265 0.022866 0.000129 0.004663 0.976876 0.009265 0.009196 0.045466 0.423744 0.041000 0.489789 0.118012 0.022866 0.849926 0.009196 0.036398 0.390126 0.050067 0.523409 0.136149 0.009265 0.827254 0.027332 MOTIF 11-CSGSGWCSCSG STREME-11 letter-probability matrix: alength= 4 w= 11 nsites= 1667 E= 4.1e-003 0.045009 0.821051 0.056232 0.077708 0.090494 0.407416 0.485465 0.016625 0.095944 0.061928 0.737831 0.104297 0.141732 0.249756 0.425667 0.182845 0.000031 0.000048 0.991686 0.008235 0.498183 0.001817 0.001817 0.498183 0.008235 0.991686 0.000048 0.000031 0.182845 0.425667 0.249756 0.141732 0.104297 0.737831 0.061928 0.095944 0.016625 0.485465 0.407416 0.090494 0.077708 0.056232 0.821051 0.045009 MOTIF 12-CTCRGCYTC STREME-12 letter-probability matrix: alength= 4 w= 9 nsites= 902 E= 5.0e-003 0.000136 0.999520 0.000208 0.000136 0.000136 0.000208 0.000208 0.999448 0.016394 0.855101 0.000208 0.128297 0.360810 0.000208 0.548574 0.090408 0.224503 0.000208 0.701802 0.073487 0.085251 0.600974 0.041890 0.271885 0.000136 0.540431 0.118372 0.341061 0.041025 0.000208 0.000208 0.958559 0.000136 0.999520 0.000208 0.000136 MOTIF 13-AGGAAG STREME-13 letter-probability matrix: alength= 4 w= 6 nsites= 1792 E= 5.3e-002 0.927064 0.027482 0.027482 0.017973 0.017973 0.027482 0.936573 0.017973 0.017973 0.027482 0.936573 0.017973 0.927064 0.027482 0.027482 0.017973 0.927064 0.027482 0.027482 0.017973 0.017973 0.027482 0.936573 0.017973 MOTIF 14-CCCAGCAC STREME-14 letter-probability matrix: alength= 4 w= 8 nsites= 184 E= 1.5e-001 0.017973 0.936573 0.027482 0.017973 0.017973 0.936573 0.027482 0.017973 0.017973 0.936573 0.027482 0.017973 0.927064 0.027482 0.027482 0.017973 0.017973 0.027482 0.936573 0.017973 0.017973 0.936573 0.027482 0.017973 0.927064 0.027482 0.027482 0.017973 0.017973 0.936573 0.027482 0.017973 MOTIF 15-GGAAGTGACK STREME-15 letter-probability matrix: alength= 4 w= 10 nsites= 347 E= 2.1e-001 0.027302 0.100434 0.863745 0.008518 0.017003 0.135002 0.689558 0.158436 0.852214 0.032716 0.000243 0.114827 0.857203 0.104631 0.036338 0.001828 0.005732 0.044765 0.927548 0.021955 0.024200 0.060350 0.047766 0.867683 0.021503 0.078720 0.831394 0.068383 0.946942 0.016213 0.028545 0.008300 0.053279 0.846279 0.078240 0.022203 0.011181 0.047139 0.380714 0.560966 MOTIF 16-AGACCCTGTCTCTA STREME-16 letter-probability matrix: alength= 4 w= 14 nsites= 103 E= 2.4e-001 0.998143 0.000700 0.000700 0.000458 0.228154 0.000700 0.754648 0.016499 0.966061 0.000700 0.016741 0.016499 0.016499 0.918178 0.016741 0.048582 0.016499 0.854012 0.000700 0.128790 0.000458 0.982344 0.016741 0.000458 0.016499 0.161135 0.016741 0.805625 0.112746 0.016741 0.854014 0.016499 0.016499 0.032782 0.032782 0.917937 0.000458 0.950262 0.032782 0.016499 0.000458 0.032782 0.016741 0.950019 0.016499 0.870054 0.064865 0.048582 0.273163 0.064865 0.032782 0.629189 0.853769 0.032782 0.048823 0.064625 MOTIF 17-ACTTCCGG STREME-17 letter-probability matrix: alength= 4 w= 8 nsites= 105 E= 2.4e-001 0.927064 0.027482 0.027482 0.017973 0.017973 0.936573 0.027482 0.017973 0.017973 0.027482 0.027482 0.927064 0.017973 0.027482 0.027482 0.927064 0.017973 0.936573 0.027482 0.017973 0.017973 0.936573 0.027482 0.017973 0.017973 0.027482 0.936573 0.017973 0.017973 0.027482 0.936573 0.017973 MOTIF 18-GTATTTTTA STREME-18 letter-probability matrix: alength= 4 w= 9 nsites= 76 E= 2.9e-001 0.001014 0.001551 0.996421 0.001014 0.001014 0.001551 0.001551 0.995884 0.995884 0.001551 0.001551 0.001014 0.001014 0.001551 0.001551 0.995884 0.001014 0.001551 0.001551 0.995884 0.077188 0.001551 0.016308 0.904953 0.001014 0.001551 0.143805 0.853630 0.001014 0.001551 0.001551 0.995884 0.995884 0.001551 0.001551 0.001014 MOTIF 19-CAACATGGYG STREME-19 letter-probability matrix: alength= 4 w= 10 nsites= 147 E= 3.1e-001 0.000277 0.969905 0.000423 0.029395 0.960051 0.000423 0.039249 0.000277 0.998877 0.000423 0.000423 0.000277 0.000277 0.720066 0.250262 0.029395 0.979465 0.000423 0.019835 0.000277 0.000277 0.048957 0.000423 0.950343 0.173621 0.068364 0.757737 0.000277 0.009983 0.000423 0.989317 0.000277 0.153763 0.340173 0.031413 0.474651 0.245364 0.005276 0.747213 0.002146 MOTIF 20-CCGCGGCC STREME-20 letter-probability matrix: alength= 4 w= 8 nsites= 1171 E= 3.5e-001 0.017892 0.927957 0.000966 0.053185 0.000631 0.997772 0.000966 0.000631 0.066828 0.000966 0.782970 0.149236 0.110640 0.823099 0.000966 0.065296 0.000631 0.000966 0.997772 0.000631 0.009661 0.000966 0.955424 0.033950 0.020666 0.957594 0.000966 0.020774 0.001250 0.943997 0.054122 0.000631 MOTIF 21-CAAGGTCAC STREME-21 letter-probability matrix: alength= 4 w= 9 nsites= 66 E= 3.9e-001 0.000800 0.749975 0.001223 0.248002 0.996754 0.001223 0.001223 0.000800 0.996754 0.001223 0.001223 0.000800 0.000800 0.049829 0.948571 0.000800 0.000800 0.001223 0.815504 0.182473 0.000800 0.001223 0.001223 0.996754 0.000800 0.937103 0.001223 0.060874 0.996754 0.001223 0.001223 0.000800 0.000800 0.997177 0.001223 0.000800 MOTIF 22-AAAAAAAAAAAAAAAAAAAA STREME-22 letter-probability matrix: alength= 4 w= 20 nsites= 189 E= 6.3e-001 0.925085 0.022840 0.006733 0.045343 0.954094 0.026087 0.013184 0.006635 0.883130 0.038990 0.064794 0.013087 0.883130 0.064794 0.038989 0.013087 0.844421 0.032538 0.071246 0.051794 0.786357 0.109957 0.045440 0.058246 0.870227 0.045441 0.051892 0.032440 0.857324 0.077697 0.026086 0.038892 0.870227 0.051891 0.045441 0.032440 0.786359 0.077698 0.084148 0.051794 0.825067 0.097052 0.045440 0.032441 0.831519 0.051892 0.064795 0.051794 0.837970 0.038990 0.064795 0.058245 0.789585 0.097052 0.068020 0.045343 0.857325 0.051892 0.064794 0.025989 0.798495 0.064796 0.065560 0.071148 0.786360 0.045440 0.084149 0.084051 0.705336 0.097052 0.087757 0.109856 0.890505 0.058343 0.025163 0.025989 0.890278 0.045440 0.023647 0.040635 MOTIF 23-AGAAAGAAAGAAAGAAA STREME-23 letter-probability matrix: alength= 4 w= 17 nsites= 86 E= 7.1e-001 0.856012 0.000518 0.036171 0.107298 0.071645 0.107477 0.796770 0.024108 0.891665 0.083709 0.024287 0.000339 0.832244 0.095593 0.036171 0.035992 0.772822 0.012403 0.131246 0.083529 0.035992 0.000518 0.927498 0.035992 0.737169 0.071824 0.143130 0.047876 0.832244 0.048056 0.059940 0.059761 0.737169 0.036171 0.095593 0.131067 0.202373 0.048056 0.666043 0.083529 0.725285 0.083709 0.131246 0.059761 0.796591 0.036171 0.059940 0.107298 0.856012 0.000518 0.119362 0.024108 0.035992 0.143130 0.606621 0.214257 0.951087 0.000518 0.048056 0.000339 0.772822 0.012403 0.131246 0.083529 0.939203 0.000518 0.036171 0.024108 MOTIF 24-GCRTGWGCCACCAYRCCY STREME-24 letter-probability matrix: alength= 4 w= 18 nsites= 84 E= 7.2e-001 0.112848 0.000613 0.872082 0.014457 0.000401 0.745578 0.070893 0.183128 0.576695 0.084949 0.337956 0.000401 0.000401 0.183340 0.056837 0.759422 0.140960 0.028725 0.829914 0.000401 0.337744 0.127117 0.014669 0.520471 0.155016 0.028725 0.815858 0.000401 0.000401 0.998585 0.000613 0.000401 0.000401 0.858026 0.000613 0.140960 0.829702 0.042781 0.084949 0.042569 0.000401 0.886138 0.113061 0.000401 0.070681 0.886138 0.000613 0.042569 0.646974 0.014669 0.225508 0.112848 0.042569 0.436347 0.127117 0.393967 0.295576 0.127117 0.576907 0.000401 0.000401 0.886138 0.000613 0.112848 0.028513 0.731522 0.000613 0.239352 0.028513 0.436347 0.099005 0.436135 MOTIF 25-ATGGCGGCG STREME-25 letter-probability matrix: alength= 4 w= 9 nsites= 140 E= 7.5e-001 0.998218 0.000672 0.000672 0.000439 0.000439 0.028342 0.000672 0.970547 0.001872 0.033592 0.962663 0.001872 0.043412 0.011843 0.937916 0.006829 0.000439 0.840285 0.076522 0.082753 0.015837 0.170085 0.697220 0.116858 0.053976 0.004228 0.925959 0.015837 0.000439 0.994262 0.000672 0.004627 0.021517 0.133461 0.748578 0.096445 MOTIF 26-GGAGGAGGAGGMGGV STREME-26 letter-probability matrix: alength= 4 w= 15 nsites= 337 E= 7.9e-001 0.000095 0.112987 0.883503 0.003416 0.089208 0.000145 0.900589 0.010059 0.999616 0.000145 0.000145 0.000095 0.000095 0.096465 0.903345 0.000095 0.016702 0.020073 0.963130 0.000095 0.766176 0.203692 0.010109 0.020023 0.046595 0.109186 0.840803 0.003416 0.010059 0.000145 0.986380 0.003416 0.612013 0.288106 0.026716 0.073165 0.124365 0.159007 0.716533 0.000095 0.087829 0.040002 0.872074 0.000095 0.477778 0.264043 0.151801 0.106379 0.057372 0.063251 0.879282 0.000095 0.023344 0.147665 0.822253 0.006737 0.402600 0.363182 0.227480 0.006737 MOTIF 27-ATGTCAC STREME-27 letter-probability matrix: alength= 4 w= 7 nsites= 198 E= 9.6e-001 0.927064 0.027482 0.027482 0.017973 0.017973 0.027482 0.027482 0.927064 0.017973 0.027482 0.936573 0.017973 0.017973 0.027482 0.027482 0.927064 0.017973 0.936573 0.027482 0.017973 0.927064 0.027482 0.027482 0.017973 0.017973 0.936573 0.027482 0.017973 MOTIF 28-ACAAAAATTA STREME-28 letter-probability matrix: alength= 4 w= 10 nsites= 52 E= 1.2e+000 0.996644 0.001265 0.001265 0.000827 0.000827 0.997081 0.001265 0.000827 0.967649 0.001265 0.030259 0.000827 0.996644 0.001265 0.001265 0.000827 0.694634 0.013298 0.146253 0.145815 0.935954 0.013298 0.049922 0.000827 0.996644 0.001265 0.001265 0.000827 0.000827 0.001265 0.001265 0.996644 0.000827 0.001265 0.001265 0.996644 0.996644 0.001265 0.001265 0.000827 MOTIF 29-CTGTAATCC STREME-29 letter-probability matrix: alength= 4 w= 9 nsites= 51 E= 1.2e+000 0.017973 0.936573 0.027482 0.017973 0.017973 0.027482 0.027482 0.927064 0.017973 0.027482 0.936573 0.017973 0.017973 0.027482 0.027482 0.927064 0.927064 0.027482 0.027482 0.017973 0.927064 0.027482 0.027482 0.017973 0.017973 0.027482 0.027482 0.927064 0.017973 0.936573 0.027482 0.017973 0.017973 0.936573 0.027482 0.017973 MOTIF 30-CGTCCCCTCCCC STREME-30 letter-probability matrix: alength= 4 w= 12 nsites= 90 E= 1.2e+000 0.050022 0.857266 0.026166 0.066545 0.000471 0.106060 0.744321 0.149148 0.016987 0.138796 0.034933 0.809284 0.000471 0.965304 0.033754 0.000471 0.000471 0.948788 0.033754 0.016987 0.000471 0.989410 0.000720 0.009399 0.000471 0.974967 0.024091 0.000471 0.000471 0.002258 0.000720 0.996551 0.000471 0.965304 0.000720 0.033505 0.016987 0.932272 0.033753 0.016987 0.000471 0.948788 0.017237 0.033505 0.000471 0.866197 0.066791 0.066541 MOTIF 31-CCCGAG STREME-31 letter-probability matrix: alength= 4 w= 6 nsites= 1201 E= 1.3e+000 0.017973 0.936573 0.027482 0.017973 0.017973 0.936573 0.027482 0.017973 0.017973 0.936573 0.027482 0.017973 0.017973 0.027482 0.936573 0.017973 0.927064 0.027482 0.027482 0.017973 0.017973 0.027482 0.936573 0.017973 MOTIF 32-AGCAGCRGCAGCAGCVGC STREME-32 letter-probability matrix: alength= 4 w= 18 nsites= 232 E= 1.4e+000 0.621148 0.094773 0.201706 0.082373 0.016568 0.090660 0.892654 0.000117 0.028907 0.921443 0.004292 0.045358 0.625261 0.012518 0.279848 0.082373 0.041245 0.074209 0.884428 0.000117 0.004230 0.958458 0.020743 0.016568 0.464863 0.086548 0.329202 0.119388 0.111162 0.024856 0.843301 0.020681 0.049471 0.904992 0.028969 0.016568 0.543005 0.193480 0.234608 0.028907 0.045358 0.033082 0.896767 0.024794 0.090598 0.826849 0.065984 0.016568 0.637599 0.148240 0.152352 0.061809 0.115275 0.028969 0.830962 0.024794 0.004230 0.826849 0.070097 0.098824 0.415510 0.251059 0.226382 0.107049 0.082373 0.070097 0.793947 0.053583 0.024794 0.781609 0.185254 0.008343 MOTIF 33-CCCGGCTC STREME-33 letter-probability matrix: alength= 4 w= 8 nsites= 382 E= 1.4e+000 0.017973 0.936573 0.027482 0.017973 0.017973 0.936573 0.027482 0.017973 0.017973 0.936573 0.027482 0.017973 0.017973 0.027482 0.936573 0.017973 0.017973 0.027482 0.936573 0.017973 0.017973 0.936573 0.027482 0.017973 0.017973 0.027482 0.027482 0.927064 0.017973 0.936573 0.027482 0.017973 MOTIF 34-CCCAGCCCCA STREME-34 letter-probability matrix: alength= 4 w= 10 nsites= 2995 E= 1.7e+000 0.026167 0.903241 0.016145 0.054446 0.017830 0.820733 0.125789 0.035648 0.054973 0.844864 0.076327 0.023836 0.836683 0.088343 0.048284 0.026690 0.050447 0.066226 0.810596 0.072731 0.056422 0.869115 0.033381 0.041081 0.074170 0.879828 0.025278 0.020724 0.053245 0.790518 0.059651 0.096586 0.048225 0.798716 0.082657 0.070402 0.616335 0.003875 0.269294 0.110495 MOTIF 35-GCAGGGCCGGGCR STREME-35 letter-probability matrix: alength= 4 w= 13 nsites= 154 E= 4.9e+000 0.000202 0.070250 0.929346 0.000202 0.052741 0.886072 0.060985 0.000202 0.851811 0.133507 0.007394 0.007288 0.028544 0.024506 0.904235 0.042715 0.000202 0.099507 0.857577 0.042715 0.014373 0.035737 0.885918 0.063971 0.079879 0.890608 0.029311 0.000202 0.086966 0.835785 0.077047 0.000202 0.058622 0.038838 0.878141 0.024399 0.018678 0.037101 0.922762 0.021458 0.014373 0.056995 0.907174 0.021458 0.122393 0.848754 0.014480 0.014373 0.484211 0.204386 0.246772 0.064632 MOTIF 36-CTTGAACCYRGG STREME-36 letter-probability matrix: alength= 4 w= 12 nsites= 84 E= 6.9e+000 0.000379 0.972082 0.000580 0.026959 0.053541 0.000580 0.040450 0.905430 0.000379 0.045967 0.000580 0.953074 0.000379 0.013870 0.985372 0.000379 0.985172 0.000580 0.000580 0.013669 0.803370 0.000580 0.195672 0.000379 0.000379 0.945501 0.013870 0.040251 0.053540 0.865758 0.013870 0.066833 0.000379 0.585390 0.013870 0.400362 0.394830 0.000580 0.604211 0.000379 0.000379 0.000580 0.998662 0.000379 0.053541 0.000580 0.932211 0.013669 MOTIF 37-GGYGACAGAGYGAGA STREME-37 letter-probability matrix: alength= 4 w= 15 nsites= 44 E= 1.9e+001 0.000646 0.000988 0.997720 0.000646 0.023299 0.000988 0.975067 0.000646 0.091258 0.544656 0.023641 0.340446 0.227174 0.046293 0.680582 0.045951 0.997378 0.000988 0.000988 0.000646 0.000646 0.929762 0.000988 0.068604 0.997378 0.000988 0.000988 0.000646 0.091257 0.091598 0.771194 0.045951 0.952073 0.000988 0.023641 0.023299 0.045951 0.000988 0.952415 0.000646 0.023299 0.635277 0.000988 0.340437 0.317788 0.023641 0.657926 0.000646 0.974725 0.000988 0.023641 0.000646 0.091257 0.000988 0.907109 0.000646 0.974725 0.000988 0.023641 0.000646 ******************************************************************************** Stopped because 3 consecutive motifs exceeded the p-value threshold (0.05). ******************************************************************************** COMMAND: streme --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d0_TRIM1_0_peaks/streme_out -dna --p /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_d0_TRIM1_0_peaks/seqs-centered --minw 5 --maxw 20 --order 2 ******************************************************************************** CPU: cn45 ******************************************************************************** FINALTIME: 1464.28 seconds ********************************************************************************