******************************************************************************** STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation ******************************************************************************** MEME version 5.4.1 (Release date: Sat Aug 21 19:23:23 2021 -0700) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey, "STREME: accurate and versatile sequence motif discovery", Bioinformatics, Mar. 24, 2021. ******************************************************************************** ALPHABET= ACGT strands: + - Background letter frequencies A 0.203 C 0.297 G 0.297 T 0.203 MOTIF 1-WCCAGCCTGGSCAACAKR STREME-1 letter-probability matrix: alength= 4 w= 18 nsites= 950 E= 9.5e-026 0.586225 0.009369 0.012864 0.391543 0.003529 0.939310 0.012863 0.044298 0.010518 0.945133 0.004709 0.039640 0.995207 0.000050 0.004709 0.000034 0.026826 0.010534 0.863578 0.099062 0.005858 0.969596 0.000050 0.024496 0.008188 0.957947 0.005874 0.027991 0.007023 0.011698 0.000050 0.981228 0.038474 0.002380 0.952123 0.007023 0.096730 0.009369 0.889208 0.004693 0.039640 0.406834 0.524370 0.029156 0.012847 0.728411 0.014028 0.244714 0.731867 0.003544 0.254071 0.010518 0.970745 0.001215 0.026841 0.001199 0.009353 0.909019 0.015193 0.066435 0.955601 0.008204 0.026842 0.009353 0.093227 0.093248 0.318168 0.495357 0.461442 0.011699 0.511682 0.015177 MOTIF 2-CTGTAATCCCAGCWMYT STREME-2 letter-probability matrix: alength= 4 w= 17 nsites= 1098 E= 1.3e-025 0.004068 0.935284 0.005091 0.055558 0.009115 0.008119 0.004081 0.978684 0.078780 0.014176 0.898938 0.008106 0.005077 0.031338 0.009129 0.954456 0.953444 0.011148 0.030331 0.005077 0.742189 0.005091 0.247643 0.005077 0.007096 0.020233 0.001053 0.971618 0.005077 0.944375 0.009129 0.041420 0.012144 0.913072 0.006100 0.068684 0.003058 0.938312 0.000043 0.058587 0.984741 0.002062 0.010138 0.003058 0.050514 0.012157 0.935280 0.002049 0.019210 0.932260 0.011148 0.037382 0.465250 0.009129 0.015186 0.510436 0.495293 0.457187 0.026291 0.021229 0.007096 0.495306 0.009129 0.488469 0.011134 0.035378 0.009129 0.944359 MOTIF 3-AGGCYGAGGCRGGAGRATC STREME-3 letter-probability matrix: alength= 4 w= 19 nsites= 987 E= 3.4e-024 0.985187 0.001178 0.005696 0.007939 0.033917 0.001178 0.963742 0.001163 0.031658 0.004566 0.952448 0.011328 0.007939 0.951318 0.015861 0.024882 0.014716 0.336653 0.005696 0.642935 0.170591 0.007955 0.807868 0.013587 0.986317 0.000048 0.011343 0.002292 0.042954 0.001178 0.953576 0.002292 0.050859 0.004566 0.938894 0.005680 0.018105 0.754779 0.009084 0.218032 0.601143 0.011343 0.377316 0.010198 0.047472 0.018120 0.902748 0.031660 0.057637 0.011343 0.925340 0.005680 0.587588 0.213530 0.015861 0.183021 0.152516 0.003437 0.836108 0.007939 0.430582 0.001178 0.567078 0.001163 0.967116 0.011343 0.019249 0.002292 0.003421 0.027156 0.005696 0.963727 0.019234 0.710690 0.080266 0.189810 MOTIF 4-CTCSAMCTCCTGRSYTCA STREME-4 letter-probability matrix: alength= 4 w= 18 nsites= 971 E= 1.8e-023 0.005555 0.934718 0.012198 0.047529 0.006660 0.012198 0.008884 0.972259 0.005555 0.753537 0.008884 0.232023 0.197788 0.248614 0.437562 0.116037 0.768965 0.003361 0.226537 0.001137 0.527047 0.350260 0.012198 0.110496 0.001137 0.943555 0.003361 0.051947 0.007764 0.025452 0.007779 0.959004 0.011078 0.940242 0.006675 0.042006 0.005555 0.929195 0.009988 0.055261 0.015496 0.237568 0.002256 0.744679 0.138119 0.011093 0.846337 0.004451 0.455248 0.001152 0.540254 0.003346 0.033169 0.457474 0.487233 0.022124 0.003346 0.646363 0.004466 0.345825 0.004451 0.017720 0.003361 0.974468 0.006660 0.933614 0.006675 0.053052 0.859586 0.006675 0.117138 0.016601 MOTIF 5-WTTTTTWGTAGAGAYRGG STREME-5 letter-probability matrix: alength= 4 w= 18 nsites= 861 E= 2.5e-022 0.579091 0.007704 0.028102 0.385102 0.066332 0.020453 0.006429 0.906787 0.015336 0.017903 0.021728 0.945033 0.016611 0.019178 0.021728 0.942483 0.010236 0.002604 0.016628 0.970531 0.015336 0.021728 0.000055 0.962882 0.534471 0.008979 0.028102 0.428448 0.047208 0.014078 0.641580 0.297134 0.002587 0.019178 0.008979 0.969256 0.678534 0.002604 0.034477 0.284385 0.049758 0.012804 0.931027 0.006412 0.982005 0.005154 0.012803 0.000037 0.024260 0.006429 0.965449 0.003862 0.955233 0.006429 0.028102 0.010236 0.015336 0.601988 0.011529 0.371148 0.355799 0.014078 0.604588 0.025535 0.108407 0.008979 0.869828 0.012786 0.278013 0.015353 0.695122 0.011511 MOTIF 6-AAATTAGCYRGGCRTGGTGG STREME-6 letter-probability matrix: alength= 4 w= 20 nsites= 914 E= 1.3e-020 0.773443 0.067396 0.075524 0.083636 0.757187 0.054624 0.053462 0.134727 0.720031 0.094102 0.054624 0.131243 0.090603 0.098747 0.069718 0.740931 0.142855 0.070880 0.073202 0.713064 0.670101 0.010500 0.304270 0.015129 0.033707 0.009339 0.940664 0.016290 0.010484 0.936019 0.009339 0.044158 0.012807 0.614348 0.009339 0.363507 0.353052 0.013984 0.592290 0.040675 0.041835 0.004694 0.949953 0.003517 0.041835 0.017467 0.931375 0.009323 0.029063 0.702614 0.004694 0.263629 0.377446 0.018628 0.581830 0.022096 0.011645 0.262469 0.004694 0.721191 0.155628 0.017467 0.811776 0.015129 0.041835 0.009339 0.938341 0.010484 0.001195 0.022112 0.004694 0.971999 0.040674 0.004694 0.948792 0.005840 0.036030 0.011661 0.939502 0.012807 MOTIF 7-AGTGAGCCGAGATCGYRCCA STREME-7 letter-probability matrix: alength= 4 w= 20 nsites= 460 E= 6.3e-011 0.916168 0.013587 0.054001 0.016244 0.018939 0.000116 0.972784 0.008162 0.002773 0.013587 0.005504 0.978136 0.018939 0.005504 0.970090 0.005467 0.983525 0.000116 0.013587 0.002773 0.021633 0.008198 0.962007 0.008162 0.005467 0.940453 0.008198 0.045881 0.037798 0.673715 0.027058 0.261429 0.274899 0.013587 0.695270 0.016244 0.873060 0.002810 0.002810 0.121321 0.016245 0.008198 0.972784 0.002773 0.948500 0.005504 0.037835 0.008162 0.008162 0.035141 0.005504 0.951194 0.027021 0.657550 0.075555 0.239874 0.307237 0.013587 0.652155 0.027021 0.040492 0.627912 0.010892 0.320703 0.328787 0.021669 0.638688 0.010856 0.008162 0.935065 0.013587 0.043187 0.002773 0.953925 0.000116 0.043187 0.956582 0.010892 0.024364 0.008162 MOTIF 8-CCCCRCCCC STREME-8 letter-probability matrix: alength= 4 w= 9 nsites= 1907 E= 5.5e-009 0.000107 0.999628 0.000157 0.000107 0.000107 0.999628 0.000157 0.000107 0.000107 0.999628 0.000157 0.000107 0.000107 0.902218 0.051652 0.046022 0.588312 0.000157 0.411423 0.000107 0.116380 0.556826 0.185991 0.140803 0.000107 0.999628 0.000157 0.000107 0.000107 0.999628 0.000157 0.000107 0.000107 0.931077 0.000157 0.068658 MOTIF 9-GTGAAAC STREME-9 letter-probability matrix: alength= 4 w= 7 nsites= 441 E= 4.6e-004 0.018436 0.027018 0.936109 0.018436 0.018436 0.027018 0.027018 0.927527 0.018436 0.027018 0.936109 0.018436 0.927527 0.027018 0.027018 0.018436 0.927527 0.027018 0.027018 0.018436 0.927527 0.027018 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 MOTIF 10-GCRTGAGCCACYGYGCCY STREME-10 letter-probability matrix: alength= 4 w= 18 nsites= 217 E= 1.0e-002 0.030275 0.005237 0.954298 0.010190 0.000147 0.748419 0.010258 0.241176 0.341605 0.040387 0.612840 0.005168 0.015211 0.025323 0.015280 0.944187 0.040318 0.020301 0.934212 0.005168 0.909037 0.030344 0.015280 0.045340 0.070447 0.000215 0.929191 0.000147 0.025254 0.929191 0.000215 0.045340 0.005168 0.944255 0.005237 0.045340 0.919080 0.025322 0.035365 0.020233 0.000147 0.959319 0.000215 0.040318 0.035297 0.542537 0.045408 0.376757 0.261263 0.015280 0.703225 0.020233 0.050361 0.562624 0.020301 0.366713 0.261262 0.020301 0.668075 0.050361 0.005168 0.919148 0.025322 0.050361 0.010190 0.919148 0.030344 0.040318 0.055383 0.577691 0.050430 0.316497 MOTIF 11-GYRAGACYCYGTCTCAAAA STREME-11 letter-probability matrix: alength= 4 w= 19 nsites= 108 E= 1.0e-002 0.010933 0.000455 0.967057 0.021555 0.000311 0.595288 0.000455 0.403946 0.361461 0.021699 0.616529 0.000311 0.977534 0.000455 0.021699 0.000311 0.202129 0.021699 0.775861 0.000311 0.935047 0.011077 0.053565 0.000311 0.042799 0.882082 0.000455 0.074664 0.010933 0.361603 0.042943 0.584522 0.021555 0.903326 0.032321 0.042799 0.021555 0.382846 0.011077 0.584522 0.244616 0.032321 0.722752 0.000311 0.032177 0.042943 0.021699 0.903181 0.032177 0.935191 0.000455 0.032177 0.064042 0.021699 0.000455 0.913803 0.106530 0.743996 0.074809 0.074664 0.690741 0.032321 0.021699 0.255238 0.881937 0.011077 0.074809 0.032177 0.828827 0.149163 0.000455 0.021555 0.828827 0.064187 0.000455 0.106531 MOTIF 12-GCCGCCGCCGCCGCC STREME-12 letter-probability matrix: alength= 4 w= 15 nsites= 397 E= 3.4e-002 0.027151 0.063213 0.909542 0.000094 0.008340 0.943817 0.000138 0.047705 0.000094 0.999673 0.000138 0.000094 0.052985 0.000138 0.946782 0.000094 0.000094 0.944903 0.000138 0.054865 0.000094 0.866071 0.000138 0.133697 0.000094 0.000138 0.999673 0.000094 0.000094 0.911350 0.000138 0.088418 0.000094 0.907968 0.032084 0.059853 0.092502 0.006582 0.798567 0.102349 0.004653 0.963169 0.000138 0.032040 0.000094 0.910543 0.005583 0.083780 0.058392 0.000138 0.811634 0.129835 0.025868 0.941682 0.000138 0.032312 0.052032 0.774060 0.078586 0.095322 MOTIF 13-GCTTGAACCYRGGA STREME-13 letter-probability matrix: alength= 4 w= 14 nsites= 117 E= 3.9e-002 0.308262 0.009733 0.672399 0.009606 0.000273 0.999054 0.000400 0.000273 0.018939 0.028399 0.056397 0.896265 0.009606 0.000400 0.019066 0.970928 0.000273 0.037732 0.943056 0.018939 0.970928 0.009733 0.019066 0.000273 0.821600 0.000400 0.177727 0.000273 0.000273 0.896392 0.028399 0.074937 0.000273 0.933723 0.000400 0.065604 0.102939 0.513719 0.028399 0.354943 0.392261 0.047065 0.541735 0.018939 0.065603 0.000400 0.933724 0.000273 0.102935 0.009733 0.887059 0.000273 0.858933 0.047065 0.056398 0.037605 MOTIF 14-CCCCTTCCC STREME-14 letter-probability matrix: alength= 4 w= 9 nsites= 1556 E= 4.2e-002 0.000204 0.972084 0.000299 0.027413 0.021753 0.780632 0.077860 0.119756 0.021649 0.920637 0.000299 0.057416 0.000204 0.988743 0.010849 0.000204 0.000204 0.000299 0.000299 0.999199 0.014836 0.281848 0.056274 0.647041 0.000204 0.999294 0.000299 0.000204 0.000204 0.977145 0.022447 0.000204 0.000204 0.780691 0.000299 0.218807 MOTIF 15-CCTGTAATCCCA STREME-15 letter-probability matrix: alength= 4 w= 12 nsites= 83 E= 8.3e-002 0.000398 0.998622 0.000583 0.000398 0.027578 0.917079 0.000583 0.054761 0.000398 0.000583 0.000583 0.998437 0.041169 0.014173 0.930670 0.013988 0.000398 0.000583 0.000583 0.998437 0.965616 0.000583 0.027763 0.006038 0.699422 0.014173 0.190869 0.095536 0.027578 0.000583 0.000583 0.971256 0.000398 0.930670 0.000583 0.068350 0.000398 0.998622 0.000583 0.000398 0.000398 0.876297 0.000583 0.122723 0.984847 0.000583 0.000583 0.013988 MOTIF 16-CGGGGAC STREME-16 letter-probability matrix: alength= 4 w= 7 nsites= 3591 E= 1.2e-001 0.000287 0.880596 0.000421 0.118696 0.000287 0.207139 0.792287 0.000287 0.041573 0.003111 0.954430 0.000886 0.018465 0.035222 0.872813 0.073501 0.042894 0.016594 0.936861 0.003651 0.801809 0.000421 0.000421 0.197349 0.000287 0.982727 0.000421 0.016565 MOTIF 17-CCTCAGCCTCCCR STREME-17 letter-probability matrix: alength= 4 w= 13 nsites= 174 E= 1.3e-001 0.012862 0.910615 0.012949 0.063573 0.000185 0.996727 0.000272 0.002816 0.000185 0.000272 0.063658 0.935885 0.000185 0.904265 0.012949 0.082601 0.721419 0.000272 0.278124 0.000185 0.019201 0.019287 0.923295 0.038217 0.012862 0.961326 0.000272 0.025540 0.000185 0.957027 0.000272 0.042515 0.025540 0.000272 0.000272 0.973917 0.000185 0.999357 0.000272 0.000185 0.012862 0.948649 0.038303 0.000185 0.019201 0.810225 0.009241 0.161333 0.581880 0.000272 0.417663 0.000185 MOTIF 18-AAGATGGCGGC STREME-18 letter-probability matrix: alength= 4 w= 11 nsites= 144 E= 1.3e-001 0.990665 0.000359 0.000359 0.008617 0.898571 0.050591 0.033849 0.016989 0.046098 0.082658 0.862626 0.008617 0.967464 0.014408 0.017883 0.000245 0.000245 0.042220 0.000359 0.957176 0.000245 0.008731 0.990779 0.000245 0.033733 0.000359 0.945444 0.020464 0.020465 0.890682 0.000359 0.088494 0.037208 0.043833 0.775134 0.143824 0.213033 0.060579 0.668961 0.057427 0.078523 0.857742 0.000359 0.063376 MOTIF 19-GCCACTGCAC STREME-19 letter-probability matrix: alength= 4 w= 10 nsites= 76 E= 1.3e-001 0.166953 0.001272 0.830907 0.000868 0.000868 0.996991 0.001272 0.000868 0.030543 0.894288 0.030948 0.044221 0.996587 0.001272 0.001272 0.000868 0.006584 0.771184 0.001272 0.220959 0.000868 0.001272 0.001272 0.996587 0.018900 0.001272 0.978959 0.000868 0.000868 0.996991 0.001272 0.000868 0.996587 0.001272 0.001272 0.000868 0.000868 0.996991 0.001272 0.000868 MOTIF 20-CAGCCCCG STREME-20 letter-probability matrix: alength= 4 w= 8 nsites= 2238 E= 1.4e-001 0.039679 0.764698 0.126913 0.068710 0.827917 0.000674 0.139381 0.032028 0.015500 0.000674 0.983366 0.000460 0.000460 0.972579 0.000674 0.026287 0.000460 0.947633 0.000674 0.051233 0.027847 0.876440 0.000674 0.095039 0.000460 0.939775 0.059305 0.000460 0.121085 0.000674 0.877781 0.000460 MOTIF 21-AAAMAAAAMAAAAAAAAAAA STREME-21 letter-probability matrix: alength= 4 w= 20 nsites= 151 E= 1.6e-001 0.999043 0.000357 0.000357 0.000243 0.999043 0.000357 0.000357 0.000243 0.999043 0.000357 0.000357 0.000243 0.326394 0.415027 0.075251 0.183328 0.899179 0.091899 0.000357 0.008565 0.999043 0.000357 0.000357 0.000243 0.899185 0.100214 0.000357 0.000243 0.782672 0.041965 0.000357 0.175007 0.582952 0.308266 0.108539 0.000243 0.766040 0.200074 0.008678 0.025208 0.957435 0.041965 0.000357 0.000243 0.832601 0.017001 0.000357 0.150042 0.820833 0.178566 0.000357 0.000243 0.596148 0.261784 0.091895 0.050172 0.999043 0.000357 0.000357 0.000243 0.678653 0.141824 0.021160 0.158363 0.857572 0.125185 0.000357 0.016887 0.875790 0.033643 0.065359 0.025208 0.857573 0.125184 0.000357 0.016886 0.874217 0.033643 0.000357 0.091784 MOTIF 22-CTGCACTCCAGCC STREME-22 letter-probability matrix: alength= 4 w= 13 nsites= 100 E= 1.7e-001 0.000289 0.919952 0.010303 0.069456 0.000289 0.000424 0.020183 0.979104 0.059571 0.000424 0.939716 0.000289 0.000289 0.998998 0.000424 0.000289 0.998864 0.000424 0.000424 0.000289 0.010169 0.989119 0.000424 0.000289 0.000289 0.000424 0.020183 0.979104 0.020048 0.959480 0.010303 0.010169 0.000289 0.959478 0.010303 0.029929 0.998864 0.000424 0.000424 0.000289 0.020049 0.020183 0.949599 0.010169 0.029929 0.840916 0.109106 0.020049 0.010169 0.989119 0.000424 0.000289 MOTIF 23-GCAACCTCCRCCTC STREME-23 letter-probability matrix: alength= 4 w= 14 nsites= 75 E= 1.7e-001 0.047970 0.048186 0.871710 0.032134 0.016299 0.935052 0.032350 0.016299 0.934837 0.032350 0.000679 0.032134 0.887329 0.000679 0.079857 0.032134 0.032134 0.887546 0.048186 0.032134 0.032134 0.919217 0.016515 0.032134 0.016299 0.016515 0.016515 0.950672 0.000463 0.966723 0.000679 0.032134 0.016299 0.792504 0.032350 0.158847 0.649753 0.000679 0.333269 0.016299 0.000463 0.982559 0.000679 0.016299 0.016299 0.935052 0.016515 0.032134 0.000463 0.032350 0.016515 0.950672 0.047970 0.855875 0.064021 0.032134 MOTIF 24-CCCGGGCC STREME-24 letter-probability matrix: alength= 4 w= 8 nsites= 416 E= 2.7e-001 0.018436 0.936109 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 0.018436 0.027018 0.936109 0.018436 0.018436 0.027018 0.936109 0.018436 0.018436 0.027018 0.936109 0.018436 0.018436 0.936109 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 MOTIF 25-GTYTCRCYMTGTTGSCCA STREME-25 letter-probability matrix: alength= 4 w= 18 nsites= 124 E= 3.3e-001 0.056168 0.040295 0.903303 0.000234 0.000234 0.000343 0.000343 0.999081 0.000234 0.407866 0.000343 0.591558 0.000234 0.000343 0.000343 0.999081 0.008224 0.759469 0.000343 0.231964 0.623520 0.000343 0.351932 0.024206 0.000234 0.991199 0.008333 0.000234 0.000234 0.535732 0.016324 0.447710 0.551601 0.319970 0.104224 0.024206 0.000234 0.096230 0.016324 0.887213 0.104112 0.000343 0.871340 0.024206 0.024206 0.024314 0.000343 0.951138 0.000234 0.216090 0.040295 0.743381 0.184021 0.000343 0.791431 0.024206 0.032197 0.511745 0.383909 0.072149 0.000234 0.895311 0.008333 0.096122 0.168038 0.743489 0.040295 0.048177 0.775343 0.016324 0.208100 0.000234 MOTIF 26-CTAAAAATACA STREME-26 letter-probability matrix: alength= 4 w= 11 nsites= 61 E= 3.3e-001 0.000550 0.998093 0.000806 0.000550 0.000550 0.000806 0.000806 0.997837 0.997837 0.000806 0.000806 0.000550 0.903817 0.057218 0.038414 0.000550 0.941426 0.019610 0.019610 0.019354 0.922622 0.019610 0.000806 0.056962 0.979034 0.019610 0.000806 0.000550 0.000550 0.000806 0.000806 0.997837 0.997837 0.000806 0.000806 0.000550 0.000550 0.998093 0.000806 0.000550 0.997837 0.000806 0.000806 0.000550 MOTIF 27-CAAGGTCA STREME-27 letter-probability matrix: alength= 4 w= 8 nsites= 220 E= 4.0e-001 0.000700 0.997575 0.001025 0.000700 0.774714 0.001025 0.223561 0.000700 0.882679 0.115596 0.001025 0.000700 0.000700 0.050224 0.948377 0.000700 0.116951 0.001025 0.881324 0.000700 0.000700 0.001025 0.001025 0.997249 0.000700 0.988992 0.001025 0.009283 0.991157 0.001025 0.007118 0.000700 MOTIF 28-GCCTCAGTTTCCT STREME-28 letter-probability matrix: alength= 4 w= 13 nsites= 138 E= 4.8e-001 0.080535 0.000344 0.886766 0.032355 0.048415 0.846616 0.048524 0.056445 0.008265 0.830556 0.056554 0.104624 0.000235 0.008374 0.008374 0.983017 0.008265 0.910856 0.024434 0.056445 0.918777 0.032464 0.048524 0.000235 0.048415 0.064584 0.886766 0.000235 0.008265 0.082192 0.024435 0.885108 0.000235 0.016405 0.032464 0.950896 0.056446 0.000344 0.016404 0.926806 0.027657 0.907523 0.008374 0.056445 0.000235 0.894047 0.000344 0.105374 0.029770 0.310979 0.016404 0.642847 MOTIF 29-AAATAAAT STREME-29 letter-probability matrix: alength= 4 w= 8 nsites= 184 E= 6.0e-001 0.996164 0.001430 0.001430 0.000976 0.996164 0.001430 0.001430 0.000976 0.977552 0.020042 0.001430 0.000976 0.000976 0.001430 0.001430 0.996164 0.996164 0.001430 0.001430 0.000976 0.645642 0.108372 0.245010 0.000976 0.996164 0.001430 0.001430 0.000976 0.000976 0.001430 0.001430 0.996164 MOTIF 30-CCAAAGTGCTGGG STREME-30 letter-probability matrix: alength= 4 w= 13 nsites= 48 E= 6.7e-001 0.018436 0.936109 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 0.927527 0.027018 0.027018 0.018436 0.927527 0.027018 0.027018 0.018436 0.927527 0.027018 0.027018 0.018436 0.018436 0.027018 0.936109 0.018436 0.018436 0.027018 0.027018 0.927527 0.018436 0.027018 0.936109 0.018436 0.018436 0.936109 0.027018 0.018436 0.018436 0.027018 0.027018 0.927527 0.018436 0.027018 0.936109 0.018436 0.018436 0.027018 0.936109 0.018436 0.018436 0.027018 0.936109 0.018436 MOTIF 31-AAAGAAAAGAAAAGAAAAGA STREME-31 letter-probability matrix: alength= 4 w= 20 nsites= 96 E= 8.2e-001 0.946252 0.021466 0.031974 0.000307 0.883205 0.021466 0.042482 0.052847 0.841174 0.000451 0.084513 0.073862 0.168671 0.105529 0.693969 0.031831 0.925237 0.031974 0.010958 0.031831 0.862189 0.021466 0.095021 0.021323 0.851682 0.052990 0.031974 0.063355 0.799142 0.031974 0.105529 0.063355 0.189687 0.042482 0.714984 0.052847 0.809650 0.074005 0.074005 0.042339 0.868336 0.052990 0.067859 0.010815 0.778127 0.010958 0.158068 0.052847 0.788635 0.052990 0.116037 0.042339 0.263242 0.137053 0.536351 0.063355 0.778127 0.021466 0.147560 0.052847 0.746603 0.063498 0.126545 0.063355 0.746603 0.031974 0.147560 0.073862 0.710719 0.031974 0.130906 0.126402 0.189449 0.095021 0.599636 0.115894 0.692040 0.086538 0.137053 0.084370 MOTIF 32-CACTTCCGG STREME-32 letter-probability matrix: alength= 4 w= 9 nsites= 293 E= 1.2e+000 0.013663 0.922240 0.039443 0.024655 0.979332 0.000479 0.019862 0.000327 0.000644 0.994526 0.004502 0.000327 0.060042 0.000479 0.033172 0.906307 0.011497 0.000479 0.000479 0.987545 0.045012 0.946331 0.001055 0.007601 0.000327 0.968382 0.030964 0.000327 0.000327 0.099952 0.780288 0.119433 0.043590 0.073954 0.833963 0.048493 MOTIF 33-CCCAGCTACTCGGG STREME-33 letter-probability matrix: alength= 4 w= 14 nsites= 58 E= 1.3e+000 0.017752 0.922101 0.000740 0.059407 0.000505 0.894763 0.052483 0.052249 0.017752 0.963756 0.000740 0.017752 0.980768 0.000740 0.017987 0.000505 0.069496 0.007898 0.922102 0.000505 0.000505 0.981003 0.000740 0.017752 0.000505 0.017987 0.035235 0.946273 0.904619 0.017987 0.059641 0.017752 0.000505 0.946508 0.017987 0.035000 0.017752 0.017987 0.017987 0.946273 0.035000 0.670526 0.069731 0.224743 0.276514 0.000740 0.653250 0.069496 0.017752 0.000740 0.981003 0.000505 0.069496 0.035235 0.894764 0.000505 MOTIF 34-ACTACAWTTCCCAGAATSC STREME-34 letter-probability matrix: alength= 4 w= 19 nsites= 38 E= 1.3e+000 0.994291 0.002128 0.002128 0.001452 0.100736 0.895683 0.002128 0.001452 0.001452 0.051770 0.002128 0.944649 0.895007 0.051770 0.002128 0.051094 0.001452 0.994967 0.002128 0.001452 0.994291 0.002128 0.002128 0.001452 0.398588 0.051770 0.051770 0.497872 0.001452 0.051770 0.151054 0.795723 0.051094 0.002128 0.002128 0.944649 0.051094 0.945325 0.002128 0.001452 0.001452 0.945325 0.002128 0.051094 0.001452 0.994967 0.002128 0.001452 0.944649 0.051770 0.002128 0.001452 0.051094 0.151054 0.746757 0.051094 0.746081 0.250338 0.002128 0.001452 0.746081 0.051770 0.200696 0.001452 0.150378 0.200696 0.200696 0.448230 0.051094 0.250338 0.498548 0.200020 0.150378 0.697115 0.051770 0.100736 MOTIF 35-CTTGAACTCC STREME-35 letter-probability matrix: alength= 4 w= 10 nsites= 32 E= 1.3e+000 0.018436 0.936109 0.027018 0.018436 0.018436 0.027018 0.027018 0.927527 0.018436 0.027018 0.027018 0.927527 0.018436 0.027018 0.936109 0.018436 0.927527 0.027018 0.027018 0.018436 0.927527 0.027018 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 0.018436 0.027018 0.027018 0.927527 0.018436 0.936109 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 MOTIF 36-ACAAAAATTA STREME-36 letter-probability matrix: alength= 4 w= 10 nsites= 45 E= 1.3e+000 0.927527 0.027018 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 0.927527 0.027018 0.027018 0.018436 0.927527 0.027018 0.027018 0.018436 0.927527 0.027018 0.027018 0.018436 0.927527 0.027018 0.027018 0.018436 0.927527 0.027018 0.027018 0.018436 0.018436 0.027018 0.027018 0.927527 0.018436 0.027018 0.027018 0.927527 0.927527 0.027018 0.027018 0.018436 MOTIF 37-GGGATTACA STREME-37 letter-probability matrix: alength= 4 w= 9 nsites= 31 E= 1.3e+000 0.018436 0.027018 0.936109 0.018436 0.018436 0.027018 0.936109 0.018436 0.018436 0.027018 0.936109 0.018436 0.927527 0.027018 0.027018 0.018436 0.018436 0.027018 0.027018 0.927527 0.018436 0.027018 0.027018 0.927527 0.927527 0.027018 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 0.927527 0.027018 0.027018 0.018436 MOTIF 38-CACACACACACACACACACW STREME-38 letter-probability matrix: alength= 4 w= 20 nsites= 172 E= 1.6e+000 0.102474 0.730200 0.037926 0.129399 0.891679 0.011001 0.086392 0.010928 0.140169 0.735586 0.054082 0.070163 0.864754 0.016386 0.118702 0.000158 0.000158 0.789436 0.027156 0.183250 0.778593 0.021771 0.183323 0.016313 0.129399 0.654810 0.048697 0.167095 0.789363 0.021771 0.070237 0.118629 0.048623 0.719430 0.086392 0.145554 0.735512 0.070237 0.129473 0.064778 0.253256 0.568648 0.037926 0.140169 0.660121 0.091777 0.151013 0.097089 0.107859 0.660195 0.027156 0.204790 0.703202 0.070237 0.134858 0.091704 0.242486 0.644039 0.048697 0.064778 0.730127 0.064852 0.091777 0.113244 0.118629 0.611729 0.129473 0.140169 0.719357 0.124087 0.113317 0.043238 0.167095 0.514798 0.107932 0.210175 0.407023 0.064852 0.167168 0.360957 MOTIF 39-GAAGGAAAG STREME-39 letter-probability matrix: alength= 4 w= 9 nsites= 694 E= 1.6e+000 0.048340 0.046495 0.835717 0.069448 0.867228 0.018102 0.023391 0.091279 0.911955 0.042232 0.019794 0.026019 0.040488 0.078239 0.844249 0.037024 0.094356 0.102817 0.678844 0.123983 0.913441 0.011718 0.011120 0.063721 0.892954 0.027152 0.006610 0.073283 0.855199 0.112735 0.006351 0.025715 0.033908 0.118356 0.804935 0.042801 MOTIF 40-TCACTGCA STREME-40 letter-probability matrix: alength= 4 w= 8 nsites= 126 E= 1.7e+000 0.018436 0.027018 0.027018 0.927527 0.018436 0.936109 0.027018 0.018436 0.927527 0.027018 0.027018 0.018436 0.018436 0.936109 0.027018 0.018436 0.018436 0.027018 0.027018 0.927527 0.018436 0.027018 0.936109 0.018436 0.018436 0.936109 0.027018 0.018436 0.927527 0.027018 0.027018 0.018436 MOTIF 41-AGGAGGAGGAGGAGGAG STREME-41 letter-probability matrix: alength= 4 w= 17 nsites= 154 E= 3.8e+000 0.850948 0.000301 0.148546 0.000205 0.189735 0.056458 0.753603 0.000205 0.000205 0.035400 0.964189 0.000205 0.865821 0.091555 0.000301 0.042323 0.168675 0.091556 0.704466 0.035303 0.014245 0.126653 0.858897 0.000205 0.914958 0.049438 0.035399 0.000205 0.070401 0.105595 0.823799 0.000205 0.217813 0.007321 0.774662 0.000205 0.767546 0.077517 0.042419 0.112519 0.196754 0.000301 0.788700 0.014245 0.042323 0.042418 0.915053 0.000205 0.718409 0.175791 0.105595 0.000205 0.252910 0.014340 0.725525 0.007225 0.014245 0.000301 0.985249 0.000205 0.893899 0.000301 0.014340 0.091460 0.189734 0.035399 0.746583 0.028284 MOTIF 42-AGCAGCAGCAGCAGCAGCA STREME-42 letter-probability matrix: alength= 4 w= 19 nsites= 177 E= 4.5e+000 0.842487 0.046722 0.075767 0.035024 0.000170 0.023485 0.958748 0.017597 0.029215 0.906466 0.029294 0.035024 0.801824 0.081576 0.081576 0.035024 0.093115 0.069958 0.836757 0.000170 0.005979 0.912275 0.075767 0.005979 0.627552 0.087385 0.220993 0.064070 0.058261 0.017676 0.900657 0.023406 0.005979 0.906466 0.064149 0.023406 0.610125 0.139667 0.168712 0.081497 0.058261 0.099003 0.830948 0.011788 0.040833 0.761240 0.151284 0.046642 0.737924 0.093194 0.151284 0.017597 0.098924 0.017676 0.871612 0.011788 0.110542 0.732194 0.093194 0.064070 0.534608 0.215184 0.116430 0.133778 0.098924 0.081576 0.813521 0.005979 0.029215 0.784476 0.168712 0.017597 0.552034 0.191948 0.168712 0.087306 MOTIF 43-GCGCATGCGCA STREME-43 letter-probability matrix: alength= 4 w= 11 nsites= 112 E= 9.7e+000 0.124746 0.037848 0.837042 0.000364 0.087439 0.876697 0.023063 0.012801 0.000364 0.000533 0.998739 0.000364 0.000364 0.998739 0.000533 0.000364 0.653803 0.253237 0.076711 0.016249 0.041827 0.076682 0.069605 0.811885 0.000364 0.000533 0.998739 0.000364 0.012801 0.986301 0.000533 0.000364 0.000364 0.000533 0.986301 0.012802 0.000364 0.924112 0.000533 0.074991 0.960873 0.000533 0.038230 0.000364 ******************************************************************************** Stopped because 3 consecutive motifs exceeded the p-value threshold (0.05). ******************************************************************************** COMMAND: streme --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out -dna --p /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/seqs-centered --minw 5 --maxw 20 --order 2 ******************************************************************************** CPU: cn45 ******************************************************************************** FINALTIME: 1628.84 seconds ********************************************************************************