Invoking:
  getsize /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta 1> $metrics
Finished invoke:
  name: count_seqs  status: 0  time: 0.102307
Invoking:
  fasta-most -min 50 < /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta 1> $metrics
Finished invoke:
  name: most_seqs  status: 0  time: 0.096541
Invoking:
  fasta-center -dna -len 100 < /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta 1> /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/seqs-centered
Finished invoke:
  name: center_seqs  status: 0  time: 0.144513
Invoking:
  fasta-get-markov -nostatus -nosummary -dna -m 2 /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background
Finished invoke:
  name: bg  status: 0  time: 0.091636
Invoking:
  meme /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/seqs-centered -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out -mod zoops -nmotifs 10 -minw 5 -maxw 20 -bfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background -dna -revcomp -nostatus
Finished invoke:
  name: meme  status: 0  time: 3473.392027
Invoking:
  streme --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out -dna --p /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/seqs-centered --minw 5 --maxw 20 --order 2
Finished invoke:
  name: streme  status: 0  time: 1628.891072
Invoking:
  centrimo -seqlen 296 -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/centrimo_out -bfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out/streme.xml
Finished invoke:
  name: centrimo  status: 256  time: 0.117225
Invoking:
  tomtom -verbosity 1 -text -thresh 0.1 /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/combined.meme /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/combined.meme 1> /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/motif_alignment.txt
Finished invoke:
  name: align  status: 0  time: 2.315746
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background -keepprimary -primary TCTCWAMWAAAAAWAMAAAA /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 14.24534
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background -keepprimary -primary CTCCCAARKWGCTGGGATTA /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 4.720787
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background -keepprimary -primary TSSASWCCAGCCTGGSCAAC /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 5.368668
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background -keepprimary -primary GCYGAGGCRGGAGRATCRCT /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 4.512364
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background -keepprimary -primary GGCRYGGTGGCKCAYGCCTG /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 4.559983
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background -keepprimary -primary GGCGGSGGCSGSGGCGGSGG /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 21.139837
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background -keepprimary -primary GAGGTTGCAGTGAGCYGAGA /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 3.388766
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background -keepprimary -primary TGARSYCAGGAG /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 9.340679
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background -keepprimary -primary ATGGTGAAACCC /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 2.738451
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background -keepprimary -primary 8-CCCCRCCCC /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out/streme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 20.698888
Invoking:
  spamo -verbosity 1 -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/spamo_out_1 -bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background -keepprimary -primary 11-GYRAGACYCYGTCTCAAAA /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out/streme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out/streme.xml
Finished invoke:
  name: spamo1  status: 256  time: 4.890114
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/fimo_out_1 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background --motif TCTCWAMWAAAAAWAMAAAA /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta
Finished invoke:
  name: fimo1  status: 0  time: 3.429948
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/fimo_out_2 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background --motif CTCCCAARKWGCTGGGATTA /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta
Finished invoke:
  name: fimo2  status: 0  time: 3.135699
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/fimo_out_3 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background --motif TSSASWCCAGCCTGGSCAAC /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta
Finished invoke:
  name: fimo3  status: 0  time: 3.114159
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/fimo_out_4 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background --motif GCYGAGGCRGGAGRATCRCT /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta
Finished invoke:
  name: fimo4  status: 0  time: 3.14367
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/fimo_out_5 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background --motif GGCRYGGTGGCKCAYGCCTG /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta
Finished invoke:
  name: fimo5  status: 0  time: 3.12049
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/fimo_out_6 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background --motif GGCGGSGGCSGSGGCGGSGG /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta
Finished invoke:
  name: fimo6  status: 0  time: 3.383882
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/fimo_out_7 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background --motif GAGGTTGCAGTGAGCYGAGA /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta
Finished invoke:
  name: fimo7  status: 0  time: 3.062766
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/fimo_out_8 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background --motif TGARSYCAGGAG /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta
Finished invoke:
  name: fimo8  status: 0  time: 2.791833
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/fimo_out_9 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background --motif ATGGTGAAACCC /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme_out/meme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta
Finished invoke:
  name: fimo9  status: 0  time: 2.761661
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/fimo_out_10 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background --motif 8-CCCCRCCCC /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out/streme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta
Finished invoke:
  name: fimo10  status: 0  time: 2.659836
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/fimo_out_11 --bgfile /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/background --motif 11-GYRAGACYCYGTCTCAAAA /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/streme_out/streme.xml /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta
Finished invoke:
  name: fimo11  status: 0  time: 3.040256
Writing output
Invoking:
  meme-chip_html_to_tsv /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/meme-chip.html /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks/summary.tsv "meme-chip /scratch/jngalang/MotifAnalysis/PeakFiles/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks.fasta -oc /scratch/jngalang/MotifAnalysis/MemeChipOutput/GRCh38-107_AZ_exp1_D1_BCG_TRIM1_3_peaks -meme-nmotifs 10 -minw 5 -maxw 20" 5.4.1 "Sat Aug 21 19\:23\:23 2021 -0700"
Finished invoke:
  name: summary  status: 0  time: 0.099078
Done