Index of /hwu

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]ENCFF366KUG_HNF4Arep1_q30_rmdu.bw2019-08-20 16:58 89M 
[ ]ENCFF435TOG_HNF4Arep2_q30_rmdu.bw2019-08-20 16:58 121M 
[ ]H3K27ac_liver.bam.sorted_q30_rmdu.bw2019-08-28 12:19 100M 
[ ]H3K4me3_liver.bam.sorted_q30_rmdu.bw2019-08-28 12:19 91M 
[ ]SRR1143971_1.fastq.sam.bam.sorted_q30_rmdu.bw2019-08-28 12:19 121M 
[ ]SRR1143975_1.fastq.sam.bam.sorted_q30_rmdu.bw2019-08-28 12:19 157M 
[ ]SRR643642_1.fastq.sam.bam.sorted_q30_rmdu.bw2019-08-28 12:19 84M 
[ ]SRR643651_1.fastq.sam.bam.sorted_q30_rmdu.bw2019-08-28 12:19 99M 
[ ]JUND_Liver_q30_rmdu.sorted.bw2019-09-03 09:12 180M 
[ ]ENCLB025_HLAATAC_ATAC_q30_rmdu.bw2019-09-04 11:13 210M 
[ ]B-931_demulti.fastq.gzAligned.sortedByCoord.out.bam.featureCounts.bam_sorted.bw2019-10-16 15:01 12M 
[ ]WT-929_demulti.fastq.gzAligned.sortedByCoord.out.bam.featureCounts.bam_sorted.bw2019-10-16 15:01 11M 
[ ]WT-ATAC_BWA.sam.bam.sorted_q30_rmdu.bw2019-11-07 13:39 160M 
[ ]file_long.bam.bw2019-11-12 09:27 126M 
[ ]file_short.bam.bw2019-11-12 09:27 77M 
[DIR]Zi/2019-12-05 15:13 -  
[ ]DM-ATAC_BWA.sam.bam.sorted_q30_rmdu.bw2020-02-19 13:51 23M 
[ ]WT-ATAC_BWA.sam.bam.sorted_q30_rmdu_sup.bw2020-02-19 13:54 20M 
[ ]HEPG2_ATAC_merged.sam.bam.sorted_q30_rmdu.bw2020-02-25 16:15 68M 
[ ]OrgATAC_merged.sam.bam.sorted_q30_rmdu.bw2020-02-25 16:15 67M 
[ ]SRR8784569_HEPG2_ATAC.sam.bam.sorted_q30_rmdu.bw2020-02-26 10:34 188M 
[ ]external-FR-1-ERCP-90-P6-18298_S5_R1_001.fastq.gzAligned.sortedByCoord.out.bam_rpkm.bw2020-06-17 18:05 45M 
[ ]external-FR-10-LTx-1166-Donor-bile-P5-18290_S1_R1_001.fastq.gzAligned.sortedByCoord.out.bam_rpkm.bw2020-06-17 18:05 39M 
[ ]external-FR-11-LTx-1166-Donor-Liver-p5-18289_S2_R1_001.fastq.gzAligned.sortedByCoord.out.bam_rpkm.bw2020-06-17 18:05 27M 
[ ]external-FR-12-LTx-1166-Donor-duct-P5-18288_S3_R1_001.fastq.gzAligned.sortedByCoord.out.bam_rpkm.bw2020-06-17 18:05 31M 
[ ]external-FR-13-LTx-1179-Explant-Bile-P5-18287_S4_R1_001.fastq.gzAligned.sortedByCoord.out.bam_rpkm.bw2020-06-17 18:05 34M 
[ ]external-FR-2-ERCP-91-P5-18297_S6_R1_001.fastq.gzAligned.sortedByCoord.out.bam_rpkm.bw2020-06-17 18:05 34M 
[ ]external-FR-3-ERCP-89-P5-18296_S7_R1_001.fastq.gzAligned.sortedByCoord.out.bam_rpkm.bw2020-06-17 18:06 34M 
[ ]external-FR-4-LTx-1179-Explant-duct-P5-18295_S8_R1_001.fastq.gzAligned.sortedByCoord.out.bam_rpkm.bw2020-06-17 18:06 25M 
[ ]external-FR-6-Ltx-1179-Explant-Liver-p5-18294_S9_R1_001.fastq.gzAligned.sortedByCoord.out.bam_rpkm.bw2020-06-17 18:06 42M 
[ ]external-FR-7-LTx-1172-Explant-bile-P5-18293_S10_R1_001.fastq.gzAligned.sortedByCoord.out.bam_rpkm.bw2020-06-17 18:06 34M 
[ ]external-FR-8-LTx-1172-Explant-Duct-P5-18292_S11_R1_001.fastq.gzAligned.sortedByCoord.out.bam_rpkm.bw2020-06-17 18:06 33M 
[ ]external-FR-9-Ltx-1172-explant-liver-p5-18291_S12_R1_001.fastq.gzAligned.sortedByCoord.out.bam_rpkm.bw2020-06-17 18:06 12M 
[ ]external-TvdH-RNA1-IPS1700076-EBV-18487_R1.fastq.gzAligned.sortedByCoord.out.bam_rpkm.bw2020-08-05 09:42 35M 
[ ]external-TvdH-RNA2-IPS1700076-iPSC-18486_R1.fastq.gzAligned.sortedByCoord.out.bam_rpkm.bw2020-08-05 09:42 57M 
[ ]external-TvdH-RNA3-IPS1700021-iPSC-18485_R1.fastq.gzAligned.sortedByCoord.out.bam_rpkm.bw2020-08-05 09:42 55M 
[ ]external-TvdH-RNA4-IPS1800002-EBV-18484_R1.fastq.gzAligned.sortedByCoord.out.bam_rpkm.bw2020-08-05 09:42 33M 
[ ]external-TvdH-RNA5-IPS1800002-iPSC-18483_R1.fastq.gzAligned.sortedByCoord.out.bam_rpkm.bw2020-08-05 09:43 66M 
[ ]external-TvdH-RNA6-IPS1700026-iPSC-18482_R1.fastq.gzAligned.sortedByCoord.out.bam_rpkm.bw2020-08-05 09:43 59M 
[ ]Bile_duct_DEgenes.zip2020-08-11 11:51 22M 
[ ]ASGR-N716_merged.sorted.bw2020-09-25 14:38 4.4M 
[ ]EPCAM-N703_merged.sorted.bw2020-09-25 14:38 1.8M 
[ ]Hep-18840-ATAC_BWA.sam.bam.sorted_q30_rmdu.bw2020-11-17 21:35 119M 
[ ]Hep-N714-merge_BWA.sam.bam.sorted_q30_rmdu.bw2020-11-18 17:01 19M 
[ ]Hep-N715-merge_BWA.sam.bam.sorted_q30_rmdu.bw2020-11-18 17:01 13M 
[ ]Hep-N719-merge_BWA.sam.bam.sorted_q30_rmdu.bw2020-11-18 17:02 9.0M 
[ ]Hep-N711-Merged_BWA.sam.bam.sorted_q30_rmdu.bw2020-12-02 23:11 23M 
[ ]Hep-N719-Merged_BWA.sam.bam.sorted_q30_rmdu.bw2020-12-02 23:11 12M 
[ ]Hep-N720-Merged_BWA.sam.bam.sorted_q30_rmdu.bw2020-12-02 23:15 16M 
[ ]MacaM_Rhesus_Genome_v7.fasta2020-12-11 11:57 2.7G 
[ ]MacaM_Rhesus_Genome_v7.fasta.fai2020-12-11 12:07 674  
[ ]3-ATAC_BWA.sam.bam.sorted_q30_rmdu.bam2020-12-11 12:10 194M 
[ ]3-ATAC_BWA.sam.bam.sorted_q30_rmdu.bai2020-12-11 12:10 4.2M 
[ ]4-ATAC_BWA.sam.bam.sorted_q30_rmdu.bam2020-12-11 12:10 184M 
[ ]4-ATAC_BWA.sam.bam.sorted_q30_rmdu.bai2020-12-11 12:10 4.2M 
[ ]5-ATAC_BWA.sam.bam.sorted_q30_rmdu.bam2020-12-11 12:10 79M 
[ ]5-ATAC_BWA.sam.bam.sorted_q30_rmdu.bai2020-12-11 12:10 4.5M 
[ ]6-ATAC_BWA.sam.bam.sorted_q30_rmdu.bam2020-12-11 12:10 295M 
[ ]6-ATAC_BWA.sam.bam.sorted_q30_rmdu.bai2020-12-11 12:10 3.8M 
[ ]Trial_filter_featureCounts_sorted.bam.bw2020-12-11 17:07 16M 
[ ]GSM3566929_WT_H3K27ac_H3K14ac_H3K27ac.bw2020-12-12 21:21 226M 
[ ]GSM3566934_WT_H3K4me1_H3K4me1.bw2020-12-12 21:49 197M 
[ ]GSM3566932_OE_H3K27ac_H3K14ac_H3K27ac.bw2020-12-12 21:50 221M 
[ ]GSM3566936_OE_H3K4me1_H3K4me1.bw2020-12-12 21:50 235M 
[ ]6-ATAC_BWA-MM10.sam.bam.sorted_q30_rmdu.bw2020-12-14 12:32 40M 
[ ]5-ATAC_BWA-MM10.sam.bam.sorted_q30_rmdu.bw2020-12-14 12:32 12M 
[ ]4-ATAC_BWA-MM10.sam.bam.sorted_q30_rmdu.bw2020-12-14 12:32 27M 
[ ]3-ATAC_BWA-MM10.sam.bam.sorted_q30_rmdu.bw2020-12-14 12:32 30M 
[ ]SRR8450757_BT.sam.bam.sorted.MrkDup.bam.q.bam.bw2020-12-14 20:37 77M 
[ ]SRR8450757_BT_mm10.sam.bam.sorted.MrkDup.bam.q.bam.bw2020-12-14 20:37 77M 
[ ]SRR8450755_BT.sam.bam.sorted.MrkDup.bam.q.bam.bw2020-12-14 20:37 72M 
[ ]SRR8450755_BT_mm10.sam.bam.sorted.MrkDup.bam.q.bam.bw2020-12-14 20:37 71M 
[ ]SRR8450753_BT.sam.bam.sorted.MrkDup.bam.q.bam.bw2020-12-14 20:38 76M 
[ ]SRR8450753_BT_mm10.sam.bam.sorted.MrkDup.bam.q.bam.bw2020-12-14 20:38 75M 
[ ]SRR8450750_BT.sam.bam.sorted.MrkDup.bam.q.bam.bw2020-12-14 20:38 81M 
[ ]SRR8450750_BT_mm10.sam.bam.sorted.MrkDup.bam.q.bam.bw2020-12-14 20:38 80M 
[ ]DRR045504_BT.sam.bam.sorted.MrkDup.bam.q.bam.bw2020-12-14 20:38 110M 
[ ]DRR045498_BT.sam.bam.sorted.MrkDup.bam.q.bam.bw2020-12-14 20:38 132M 
[ ]1_treat.bdg.bw2021-01-20 21:16 8.8M 
[ ]2_treat.bdg.bw2021-01-20 21:16 38M 
[ ]3_treat.bdg.bw2021-01-20 21:16 15M 
[ ]4_treat.bdg.bw2021-01-20 21:16 10M 
[ ]5_treat.bdg.bw2021-01-20 21:16 5.7M 
[ ]4C-1_treat.bdg.bw2021-01-26 12:15 13M 
[ ]4C-2_treat.bdg.bw2021-01-26 12:16 42M 
[ ]4C-3_treat.bdg.bw2021-01-26 12:16 11M 
[ ]4C-4_treat.bdg.bw2021-01-26 12:16 11M 
[ ]3C-1_treat.bdg.bw2021-01-26 12:16 9.4M 
[ ]3C-2_treat.bdg.bw2021-01-26 12:16 47M 
[ ]3C-3_treat.bdg.bw2021-01-26 12:16 19M 
[ ]25-sub.bam_rpkm.bw2021-02-04 10:48 23M 
[ ]26-sub.bam_rpkm.bw2021-02-04 10:48 60M 
[ ]27-sub.bam_rpkm.bw2021-02-04 10:48 35M 
[ ]28-sub.bam_rpkm.bw2021-02-04 10:48 59M 
[ ]31-unsub.bam_rpkm.bw2021-02-04 10:48 47M 
[ ]32-sub.bam_rpkm.bw2021-02-04 10:48 58M 
[ ]run1-N721.bam.bw2021-03-06 10:15 35M 
[ ]run1-N722.bam.bw2021-03-06 10:15 17M 
[ ]run1-N723.bam.bw2021-03-06 10:15 10M 
[ ]run2-N718.bam.bw2021-03-06 10:15 13M 
[ ]run2-N721.bam.bw2021-03-06 10:15 55M 
[ ]run2-N722.bam.bw2021-03-06 10:15 21M 
[ ]hg38-plate1_N706.bw2021-03-21 21:45 164M 
[ ]hg38-plate1_N707.bw2021-03-21 21:45 107M 
[ ]hg38-plate1_N716.bw2021-03-21 21:45 154M 
[ ]hg38-plate1_N721.bw2021-03-21 21:46 58M 
[ ]hg38-plate1_N722.bw2021-03-21 21:46 24M 
[ ]M716-EM_treated_pileup.bdg.bw2021-03-23 11:32 142M 
[ ]N716-DM_treated_pileup.bdg.bw2021-03-23 11:32 68M 
[ ]N705-DM_treated_pileup.bdg.bw2021-03-23 12:09 104M 
[ ]N705-EM_treated_pileup.bdg.bw2021-03-23 12:09 23M 
[ ]ATF3_Liver_q30_rmdu_CPM.bw2021-04-14 14:36 172M 
[ ]EGR1_Liver_q30_rmdu_CPM.bw2021-04-14 14:36 152M 
[ ]HNF4A_Liver_q30_rmdu_CPM.bw2021-04-14 14:36 180M 
[ ]JUND_Liver_q30_rmdu_CPM.bw2021-04-14 14:36 178M 
[ ]ATF3_K562_BWA.sam.bam.sorted_q30_rmdu_CPM.bw2021-04-15 21:53 143M 
[ ]EGR1_K562_BWA.sam.bam.sorted_q30_rmdu_CPM.bw2021-04-15 21:53 143M 
[ ]JUND_K562_BWA.sam.bam.sorted_q30_rmdu_CPM.bw2021-04-15 21:53 139M 
[ ]ATF3_Liver_q30_rmdu.sorted_cpm.bw2021-04-17 19:44 172M 
[ ]CTCF_Liver_q30_rmdu.sorted_cpm.bw2021-04-17 19:44 149M 
[ ]EGR1_Liver_q30_rmdu.sorted_cpm.bw2021-04-17 19:44 152M 
[ ]FOXA1_Liver_q30_rmdu.sorted_cpm.bw2021-04-17 19:44 184M 
[ ]FOXA2_Liver_q30_rmdu.sorted_cpm.bw2021-04-17 19:44 185M 
[ ]GABPA_Liver_q30_rmdu.sorted_cpm.bw2021-04-17 19:44 170M 
[ ]HNF4A_Liver_q30_rmdu.sorted_cpm.bw2021-04-17 19:44 180M 
[ ]HNF4G_Liver_q30_rmdu.sorted_cpm.bw2021-04-17 19:44 193M 
[ ]JUND_Liver_q30_rmdu.sorted_cpm.bw2021-04-17 19:44 178M 
[ ]MAX_Liver_q30_rmdu.sorted_cpm.bw2021-04-17 19:44 207M 
[ ]NR2F2_Liver_q30_rmdu.sorted_cpm.bw2021-04-17 19:44 173M 
[ ]RAD21_Liver_q30_rmdu.sorted_cpm.bw2021-04-17 19:44 159M 
[ ]REST_Liver_q30_rmdu.sorted_cpm.bw2021-04-17 19:44 193M 
[ ]RXRA_Liver_q30_rmdu.sorted_cpm.bw2021-04-17 19:44 167M 
[ ]SP1_Liver_q30_rmdu.sorted_cpm.bw2021-04-17 19:44 166M 
[ ]TAF1_Liver_q30_rmdu.sorted_cpm.bw2021-04-17 19:44 184M 
[ ]YY1_Liver_q30_rmdu.sorted_cpm.bw2021-04-17 19:44 173M 
[ ]ZBTB33_Liver_q30_rmdu.sorted_cpm.bw2021-04-17 19:44 180M 
[ ]Hep-nonPC-873-ATAC_BWA.sam.bam.sorted_q30_rmdu.bw2021-04-19 19:00 100M 
[ ]Hep-PC-872-ATAC_BWA.sam.bam.sorted_q30_rmdu.bw2021-04-19 19:00 127M 
[ ]Hep-18840-ATAC_BWA.sam.bam.sorted_q30_rmdu_cpm.bw2021-04-21 21:44 119M 
[ ]1259DM-ATAC_BWA.sam.bam.sorted_q30_rmdu.bw2021-04-28 17:46 127M 
[ ]1259EM-ATAC_BWA.sam.bam.sorted_q30_rmdu.bw2021-04-28 17:46 121M 
[ ]20196DM-ATAC_BWA.sam.bam.sorted_q30_rmdu.bw2021-04-28 17:46 127M 
[ ]20196EM-ATAC_BWA.sam.bam.sorted_q30_rmdu.bw2021-04-28 17:46 152M 
[ ]Hep-422-ATAC_BWA.sam.bam.sorted_q30_rmdu.bw2021-04-28 17:47 71M 
[ ]Hep-871-ATAC_BWA.sam.bam.sorted_q30_rmdu.bw2021-04-28 18:10 112M 
[DIR]Rotterdam/2021-04-30 11:38 -  
[ ]JUNDmotif_HEP-ATACpeaks.bed2021-05-11 17:10 329K 
[ ]HNF4Amotif_HEP-ATACpeaks.bed2021-05-11 17:10 564K 
[ ]Hep415-PC-ATAC_BWA.sam.bam.sorted_q30_rmdu.bw2021-05-19 16:41 54M 
[ ]Hep415-nPC-ATAC_BWA.sam.bam.sorted_q30_rmdu.bw2021-05-19 16:41 59M 
[ ]Hep415-PC-ATAC_merge.sorted_q30_rmdu_cpm.bw2021-06-03 21:58 97M 
[DIR]PCvsnPC/2021-07-09 20:11 -  
[DIR]Richard/2021-07-15 12:55 -  
[ ]Hep_noC4.combined.Rds2021-08-27 04:55 418M 
[TXT]BRCO_scRNA_Raw_Count.txt2021-12-15 06:19 201M 
[ ]ENCFF095ZDT_totalRNAseq_minusReads_Liver.bigWig2022-04-22 09:39 157M 
[ ]ENCFF798FMB_totalRNAseq_plusReads_Liver.bigWig2022-04-22 09:41 163M 
[ ]SRR8307998.1_1.fastqAligned.sortedByCoord.out.bam.bw2022-04-22 09:54 6.1M 
[ ]SRR8307999_1.fastqAligned.sortedByCoord.out.bam.bw2022-04-22 09:54 5.8M 
[ ]ENCFF864CLA_ATAC_E16-5_mLiver.bigWig2022-04-22 09:59 778M 
[ ]ENCFF389JBE_ATAC_postnatal_mLiver.bigWig2022-04-22 10:07 528M 
[ ]Liver_ATAC_FC20peaks.bed2022-04-24 06:47 19K 
[ ]mLiver1_ATAC.sam.bam.sorted_q30_rmdu.bw2022-04-24 07:02 151M 
[ ]mLiver2_ATAC.sam.bam.sorted_q30_rmdu.bw2022-04-24 07:02 144M 
[ ]mLung1_ATAC.sam.bam.sorted_q30_rmdu.bw2022-04-24 07:02 182M 
[ ]mLung2_ATAC.sam.bam.sorted_q30_rmdu.bw2022-04-24 07:02 165M 
[DIR]K9me3/2022-08-10 17:50 -  
[ ]HumLIv-2021.RData2022-08-29 18:03 949M 
[DIR]transfer/2022-10-09 14:10 -  
[ ]ENCFF805HDJ.bigWig2022-10-24 16:57 452M 
[ ]ENCFF270EUJ.bigWig2022-10-24 17:22 111M 
[ ]ENCFF774QSB.bigWig2022-10-24 17:23 105M 
[ ]ENCFF594VUV.bigWig2022-10-24 17:24 124M 
[ ]ENCFF877GEL.bigWig2022-10-24 17:25 124M 
[ ]ENCFF550OPA.bigWig2022-10-24 17:56 442M