[stdout]
2022-04-19 16:29:37 [cr_ana::stages::graph_clustering] computing k-nearest neighbors with k = 214
2022-04-19 16:29:37 [scan_rs::nn] constructing ball tree of 5000 points
2022-04-19 16:29:37 [scan_rs::nn] querying points for 214 neighbors
2022-04-19 16:29:38 [cr_ana::stages::graph_clustering] running louvain
2022-04-19 16:29:38 [cr_ana::louvain] louvain starting cpm score: -0.000213
2022-04-19 16:29:38 [cr_ana::louvain] louvain optimized in 22 iterations
2022-04-19 16:29:38 [cr_ana::louvain] louvain final cpm score: 0.620427
2022-04-19 16:29:38 [cr_ana::stages::graph_clustering] merging clusters
2022-04-19 16:29:38 [scan_rs::merge_clusters] computing DE params on 21795 x 1856 matrix
2022-04-19 16:29:38 [scan_rs::merge_clusters] computing DE on 1063 vs 793 cells
2022-04-19 16:29:39 [scan_rs::merge_clusters] computing DE params on 21795 x 1202 matrix
2022-04-19 16:29:39 [scan_rs::merge_clusters] computing DE on 752 vs 450 cells
