[stdout]
2022-04-19 16:30:47 [cr_ana::stages::graph_clustering] computing k-nearest neighbors with k = 250
2022-04-19 16:30:47 [scan_rs::nn] constructing ball tree of 10000 points
2022-04-19 16:30:48 [scan_rs::nn] querying points for 250 neighbors
2022-04-19 16:30:48 [cr_ana::stages::graph_clustering] running louvain
2022-04-19 16:30:49 [cr_ana::louvain] louvain starting cpm score: -0.000107
2022-04-19 16:30:51 [cr_ana::louvain] louvain optimized in 34 iterations
2022-04-19 16:30:51 [cr_ana::louvain] louvain final cpm score: 0.578664
2022-04-19 16:30:51 [cr_ana::stages::graph_clustering] merging clusters
2022-04-19 16:30:51 [scan_rs::merge_clusters] computing DE params on 21900 x 3082 matrix
2022-04-19 16:30:51 [scan_rs::merge_clusters] computing DE on 1788 vs 1294 cells
2022-04-19 16:30:52 [scan_rs::merge_clusters] computing DE params on 21900 x 2099 matrix
2022-04-19 16:30:52 [scan_rs::merge_clusters] computing DE on 1261 vs 838 cells
