Martian Runtime - v4.0.6
2022-04-19 16:47:27 [build  ] Built with Go version go1.16.5
2022-04-19 16:47:27 [cmdline] mrp __dimitri_RNA_only.mro dimitri_RNA_only --jobmode local
2022-04-19 16:47:27 [pid    ] 1375303
2022-04-19 16:47:27 [environ] SHELL=/bin/bash
2022-04-19 16:47:27 [environ] CONDA_EXE=/vol/mbconda/etanis/bin/conda
2022-04-19 16:47:27 [environ] CONDA_TOOLCHAIN_BUILD=x86_64-conda-linux-gnu
2022-04-19 16:47:27 [environ] PWD=/scratch/etanis/software/cellranger-6.1.2
2022-04-19 16:47:27 [environ] LOGNAME=etanis
2022-04-19 16:47:27 [environ] XDG_SESSION_TYPE=tty
2022-04-19 16:47:27 [environ] CONDA_PREFIX=/vol/mbconda/etanis
2022-04-19 16:47:27 [environ] CONDA_TOOLCHAIN_HOST=x86_64-conda-linux-gnu
2022-04-19 16:47:27 [environ] HOME=/home/etanis
2022-04-19 16:47:27 [environ] LANG=C
2022-04-19 16:47:27 [environ] CONDA_PROMPT_MODIFIER=(base) 
2022-04-19 16:47:27 [environ] LD=/vol/mbconda/etanis/bin/x86_64-conda-linux-gnu-ld
2022-04-19 16:47:27 [environ] SSH_CONNECTION=131.174.27.42 53824 131.174.136.191 22
2022-04-19 16:47:27 [environ] XDG_CACHE_HOME=/scratch/etanis/.cache
2022-04-19 16:47:27 [environ] XDG_SESSION_CLASS=user
2022-04-19 16:47:27 [environ] TERM=screen
2022-04-19 16:47:27 [environ] HOST=x86_64-conda-linux-gnu
2022-04-19 16:47:27 [environ] USER=etanis
2022-04-19 16:47:27 [environ] CONDA_SHLVL=1
2022-04-19 16:47:27 [environ] SHLVL=2
2022-04-19 16:47:27 [environ] BASH_ENV=/usr/share/modules/init/bash
2022-04-19 16:47:27 [environ] XDG_SESSION_ID=33
2022-04-19 16:47:27 [environ] LD_GOLD=/vol/mbconda/etanis/bin/x86_64-conda-linux-gnu-ld.gold
2022-04-19 16:47:27 [environ] CONDA_PYTHON_EXE=/vol/mbconda/etanis/bin/python
2022-04-19 16:47:27 [environ] XDG_RUNTIME_DIR=/run/user/29280
2022-04-19 16:47:27 [environ] SSH_CLIENT=131.174.27.42 53824 22
2022-04-19 16:47:27 [environ] CONDA_DEFAULT_ENV=base
2022-04-19 16:47:27 [environ] PATH=/scratch/etanis/software/cellranger-6.1.2/lib/bin:/scratch/etanis/software/cellranger-6.1.2/external/martian/bin:/scratch/etanis/software/cellranger-6.1.2/external/anaconda/bin:/scratch/etanis/software/cellranger-6.1.2/bin/tenkit:/scratch/etanis/software/cellranger-6.1.2/bin:/scratch/etanis/software/cellranger-6.1.2:/scratch/etanis/.rstudio/usr/lib/rstudio/bin:/scratch/etanis/software/rstudio/usr/lib/rstudio/bin:/scratch/etanis/.rstudio/usr/lib/rstudio/bin:/scratch/etanis/software/rstudio/usr/lib/rstudio/bin:/vol/mbconda/etanis/bin:/vol/mbconda/etanis/condabin:/usr/local/slurm/bin:/usr/local/openmpi/bin:/usr/local/hwloc/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/cuda/bin:/opt/dell/srvadmin/bin
2022-04-19 16:47:27 [environ] SSH_TTY=/dev/pts/2
2022-04-19 16:47:27 [environ] CONDA_BUILD_SYSROOT=/vol/mbconda/etanis/x86_64-conda-linux-gnu/sysroot
2022-04-19 16:47:27 [environ] BASH_FUNC_ml%%=() {  module ml "$@"
}
2022-04-19 16:47:27 [environ] BASH_FUNC_module%%=() {  _module_raw "$@" 2>&1
}
2022-04-19 16:47:27 [environ] BASH_FUNC__module_raw%%=() {  unset _mlshdbg;
 if [ "${MODULES_SILENT_SHELL_DEBUG:-0}" = '1' ]; then
 case "$-" in 
 *v*x*)
 set +vx;
 _mlshdbg='vx'
 ;;
 *v*)
 set +v;
 _mlshdbg='v'
 ;;
 *x*)
 set +x;
 _mlshdbg='x'
 ;;
 *)
 _mlshdbg=''
 ;;
 esac;
 fi;
 unset _mlre _mlIFS;
 if [ -n "${IFS+x}" ]; then
 _mlIFS=$IFS;
 fi;
 IFS=' ';
 for _mlv in ${MODULES_RUN_QUARANTINE:-};
 do
 if [ "${_mlv}" = "${_mlv##*[!A-Za-z0-9_]}" -a "${_mlv}" = "${_mlv#[0-9]}" ]; then
 if [ -n "`eval 'echo ${'$_mlv'+x}'`" ]; then
 _mlre="${_mlre:-}${_mlv}_modquar='`eval 'echo ${'$_mlv'}'`' ";
 fi;
 _mlrv="MODULES_RUNENV_${_mlv}";
 _mlre="${_mlre:-}${_mlv}='`eval 'echo ${'$_mlrv':-}'`' ";
 fi;
 done;
 if [ -n "${_mlre:-}" ]; then
 eval `eval ${_mlre} /usr/bin/tclsh8.6 /usr/lib/x86_64-linux-gnu/modulecmd.tcl bash '"$@"'`;
 else
 eval `/usr/bin/tclsh8.6 /usr/lib/x86_64-linux-gnu/modulecmd.tcl bash "$@"`;
 fi;
 _mlstatus=$?;
 if [ -n "${_mlIFS+x}" ]; then
 IFS=$_mlIFS;
 else
 unset IFS;
 fi;
 unset _mlre _mlv _mlrv _mlIFS;
 if [ -n "${_mlshdbg:-}" ]; then
 set -$_mlshdbg;
 fi;
 unset _mlshdbg;
 return $_mlstatus
}
2022-04-19 16:47:27 [environ] _=/usr/bin/nice
2022-04-19 16:47:27 [environ] LC_CTYPE=en_US.UTF-8
2022-04-19 16:47:27 [environ] PYTHONNOUSERSITE=1
2022-04-19 16:47:27 [environ] RUST_BACKTRACE=1
2022-04-19 16:47:27 [environ] PYTHONPATH=/scratch/etanis/software/cellranger-6.1.2/external/martian/adapters/python:/scratch/etanis/software/cellranger-6.1.2/lib/python
2022-04-19 16:47:27 [environ] TENX_PRODUCT=cellranger
2022-04-19 16:47:27 [environ] TENX_VERSION=cellranger-6.1.2
2022-04-19 16:47:27 [environ] TENX_COPYRIGHT=Copyright (c) 2021 10x Genomics, Inc.  All rights reserved.
2022-04-19 16:47:27 [environ] MROPATH=/scratch/etanis/software/cellranger-6.1.2/mro
2022-04-19 16:47:27 [version] MRO Version=cellranger-6.1.2
2022-04-19 16:47:27 [options] --jobmode=local
2022-04-19 16:47:27 [options] --vdrmode=rolling
2022-04-19 16:47:27 [options] --profile=disable
2022-04-19 16:47:27 [options] --stackvars=false
2022-04-19 16:47:27 [options] --zip=false
2022-04-19 16:47:27 [options] --limit-loadavg=false
2022-04-19 16:47:27 [options] --noexit=false
2022-04-19 16:47:27 [options] --nopreflight=false
2022-04-19 16:47:27 [jobmngr] Job config = /scratch/etanis/software/cellranger-6.1.2/external/martian/jobmanagers/config.json
2022-04-19 16:47:27 [jobmngr] Using 64 logical cores available on system.
2022-04-19 16:47:27 [jobmngr] Using 906 GB, 90% of system memory.
2022-04-19 16:47:27 [jobmngr] WARNING: configured to use 906GB of local memory, but only 849.7GB is currently available.
2022-04-19 16:47:27 [sysinfo] linux amd64
2022-04-19 16:47:27 [sysinfo] Linux kernel release version: 5.13.0-35-generic
2022-04-19 16:47:27 [sysinfo] glibc version: 2.31
2022-04-19 16:47:27 [filesys] Pipestance path /scratch/etanis/software/cellranger-6.1.2/dimitri_RNA_only
2022-04-19 16:47:27 [filesys] Pipestance filesystem type ext
2022-04-19 16:47:27 [filesys] 28 TB and 601,584,952 inodes available.
2022-04-19 16:47:27 [filesys] Pipestance filesystem ext4 mount options: rw,relatime,rw
2022-04-19 16:47:27 [filesys] Bin path /scratch/etanis/software/cellranger-6.1.2/external/martian/bin
2022-04-19 16:47:27 [filesys] Bin filesystem type ext
2022-04-19 16:47:27 [filesys] Bin filesystem ext4 mount options: rw,relatime,rw
Serving UI at http://cn106:43751?auth=1CZFAisSecYLW9a7BiSNkIGPp5zTCsq6f4QeCCKBdr0

Running preflight checks (please wait)...
2022-04-19 16:47:27 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.CELLRANGER_PREFLIGHT_LOCAL
2022-04-19 16:47:27 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.CELLRANGER_PREFLIGHT_LOCAL.fork0.chnk0.main
2022-04-19 16:47:27 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.CELLRANGER_PREFLIGHT
2022-04-19 16:47:27 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.CELLRANGER_PREFLIGHT.fork0.chnk0.main
2022-04-19 16:47:28 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.CELLRANGER_PREFLIGHT
2022-04-19 16:47:28 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.CELLRANGER_PREFLIGHT_LOCAL
2022-04-19 16:47:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.SANITIZE_MAP_CALLS
2022-04-19 16:47:28 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.SANITIZE_MAP_CALLS
2022-04-19 16:47:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.WRITE_GENE_INDEX
2022-04-19 16:47:28 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.WRITE_GENE_INDEX.fork0.chnk0.main
2022-04-19 16:47:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.DISABLE_BAMS
2022-04-19 16:47:28 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.DISABLE_BAMS.fork0.chnk0.main
2022-04-19 16:47:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.FULL_COUNT_INPUTS.WRITE_GENE_INDEX
2022-04-19 16:47:28 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.FULL_COUNT_INPUTS.WRITE_GENE_INDEX.fork0.chnk0.main
2022-04-19 16:47:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MAKE_FULL_CONFIG._MAKE_VDJ_CONFIG
2022-04-19 16:47:28 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MAKE_FULL_CONFIG._MAKE_VDJ_CONFIG.fork0.chnk0.main
2022-04-19 16:47:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_CHEMISTRY_DETECTOR._GEM_WELL_CHEMISTRY_DETECTOR.DETECT_COUNT_CHEMISTRY
2022-04-19 16:47:28 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_CHEMISTRY_DETECTOR._GEM_WELL_CHEMISTRY_DETECTOR.DETECT_COUNT_CHEMISTRY.fork0.chnk0.main
2022-04-19 16:47:28 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.DISABLE_BAMS
2022-04-19 16:47:28 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MAKE_FULL_CONFIG._MAKE_VDJ_CONFIG
2022-04-19 16:47:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_B_GEM_WELL_PROCESSOR.MULTI_SETUP_CHUNKS
2022-04-19 16:47:28 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_B_GEM_WELL_PROCESSOR.MULTI_SETUP_CHUNKS
2022-04-19 16:47:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_T_GEM_WELL_PROCESSOR.MULTI_SETUP_CHUNKS
2022-04-19 16:47:28 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_T_GEM_WELL_PROCESSOR.MULTI_SETUP_CHUNKS
2022-04-19 16:47:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_T_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.MAKE_SHARD
2022-04-19 16:47:28 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_T_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.MAKE_SHARD
2022-04-19 16:47:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_B_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.MAKE_SHARD
2022-04-19 16:47:28 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_B_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.MAKE_SHARD
2022-04-19 16:47:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_T_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.BARCODE_CORRECTION
2022-04-19 16:47:28 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_T_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.BARCODE_CORRECTION
2022-04-19 16:47:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_B_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.BARCODE_CORRECTION
2022-04-19 16:47:28 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_B_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.BARCODE_CORRECTION
2022-04-19 16:47:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_T_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.RUST_BRIDGE
2022-04-19 16:47:28 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_T_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.RUST_BRIDGE
2022-04-19 16:47:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_B_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.RUST_BRIDGE
2022-04-19 16:47:28 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_B_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.RUST_BRIDGE
2022-04-19 16:47:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_T_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.ASSEMBLE_VDJ
2022-04-19 16:47:28 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_T_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.ASSEMBLE_VDJ
2022-04-19 16:47:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_B_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.ASSEMBLE_VDJ
2022-04-19 16:47:28 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_B_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.ASSEMBLE_VDJ
2022-04-19 16:47:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_T_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.MERGE_METRICS
2022-04-19 16:47:28 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_T_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.MERGE_METRICS
2022-04-19 16:47:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_B_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.MERGE_METRICS
2022-04-19 16:47:28 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_B_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.MERGE_METRICS
2022-04-19 16:47:40 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.FULL_COUNT_INPUTS.WRITE_GENE_INDEX
2022-04-19 16:47:40 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR.PARSE_TARGET_FEATURES
2022-04-19 16:47:40 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR.PARSE_TARGET_FEATURES.fork0.chnk0.main
2022-04-19 16:47:40 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.WRITE_GENE_INDEX
2022-04-19 16:47:41 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR.PARSE_TARGET_FEATURES
2022-04-19 16:47:55 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_CHEMISTRY_DETECTOR._GEM_WELL_CHEMISTRY_DETECTOR.DETECT_COUNT_CHEMISTRY
2022-04-19 16:47:55 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_CHEMISTRY_DETECTOR._GEM_WELL_CHEMISTRY_DETECTOR.VDJ_CHEMISTRY_DETECTOR
2022-04-19 16:47:55 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_CHEMISTRY_DETECTOR._GEM_WELL_CHEMISTRY_DETECTOR.CHECK_BARCODES_COMPATIBILITY
2022-04-19 16:47:55 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_CHEMISTRY_DETECTOR._GEM_WELL_CHEMISTRY_DETECTOR.CHECK_BARCODES_COMPATIBILITY.fork0.chnk0.main
2022-04-19 16:47:55 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_CHEMISTRY_DETECTOR._GEM_WELL_CHEMISTRY_DETECTOR.CHECK_BARCODES_COMPATIBILITY
2022-04-19 16:47:55 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_CHEMISTRY_DETECTOR.COMBINE_GEM_WELL_CHEMISTRIES
2022-04-19 16:47:55 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_CHEMISTRY_DETECTOR.COMBINE_GEM_WELL_CHEMISTRIES.fork0.chnk0.main
2022-04-19 16:47:55 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_CHEMISTRY_DETECTOR.COMBINE_GEM_WELL_CHEMISTRIES
2022-04-19 16:47:55 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.SPLIT_VDJ_INPUTS
2022-04-19 16:47:55 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.SPLIT_VDJ_INPUTS
2022-04-19 16:47:55 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR.MULTI_SETUP_CHUNKS
2022-04-19 16:47:55 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR.MULTI_SETUP_CHUNKS.fork0.chnk0.main
2022-04-19 16:47:55 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR.MULTI_SETUP_CHUNKS
2022-04-19 16:47:55 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.MAKE_SHARD
2022-04-19 16:47:55 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.MAKE_SHARD.fork0.split
2022-04-19 16:48:01 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.MAKE_SHARD
2022-04-19 16:48:01 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.MAKE_SHARD.fork0.chnk0.main
2022-04-19 16:54:03 [runtime] (update)          ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.MAKE_SHARD.fork0 chunks_running
2022-04-19 17:00:05 [runtime] (update)          ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.MAKE_SHARD.fork0 chunks_running
2022-04-19 17:06:05 [runtime] (update)          ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.MAKE_SHARD.fork0 chunks_running
2022-04-19 17:11:59 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.MAKE_SHARD
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.MAKE_SHARD.fork0.join
2022-04-19 17:11:59 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.MAKE_SHARD
2022-04-19 17:11:59 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.split
2022-04-19 17:11:59 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk00.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk01.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk02.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk03.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk04.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk05.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk06.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk07.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk08.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk09.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk10.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk11.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk12.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk13.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk14.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk15.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk16.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk17.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk18.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk19.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk20.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk21.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk22.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk23.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk24.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk25.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk26.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk27.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk28.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk29.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk30.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk31.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk32.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk33.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk34.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk35.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk36.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk37.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk38.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk39.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk40.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk41.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk42.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk43.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk44.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk45.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk46.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk47.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk48.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk49.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk50.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk51.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk52.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk53.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk54.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk55.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk56.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk57.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk58.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk59.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk60.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk61.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk62.main
2022-04-19 17:11:59 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.chnk63.main
2022-04-19 17:12:20 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION
2022-04-19 17:12:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION.fork0.join
2022-04-19 17:12:20 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.BARCODE_CORRECTION
2022-04-19 17:12:20 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER._SLFE_PARTIAL_FIRST_PASS.SUBSAMPLE_BARCODES
2022-04-19 17:12:20 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER._SLFE_PARTIAL_FIRST_PASS.SUBSAMPLE_BARCODES
2022-04-19 17:12:20 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.WRITE_BARCODE_INDEX
2022-04-19 17:12:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.WRITE_BARCODE_INDEX.fork0.chnk0.main
2022-04-19 17:12:20 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.SET_ALIGNER_SUBSAMPLE_RATE
2022-04-19 17:12:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.SET_ALIGNER_SUBSAMPLE_RATE.fork0.chnk0.main
2022-04-19 17:12:20 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER._SLFE_PARTIAL_FIRST_PASS.INITIAL_ALIGN_AND_COUNT
2022-04-19 17:12:20 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER._SLFE_PARTIAL_FIRST_PASS.INITIAL_ALIGN_AND_COUNT
2022-04-19 17:12:20 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER._SLFE_PARTIAL_FIRST_PASS.SET_TARGETED_UMI_FILTER
2022-04-19 17:12:20 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER._SLFE_PARTIAL_FIRST_PASS.SET_TARGETED_UMI_FILTER
2022-04-19 17:12:20 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.SET_ALIGNER_SUBSAMPLE_RATE
2022-04-19 17:12:20 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER._SLFE_PARTIAL_FIRST_PASS
2022-04-19 17:12:20 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT
2022-04-19 17:12:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.split
2022-04-19 17:12:20 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT
2022-04-19 17:12:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk00.main
2022-04-19 17:12:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk01.main
2022-04-19 17:12:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk02.main
2022-04-19 17:12:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk03.main
2022-04-19 17:12:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk04.main
2022-04-19 17:12:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk05.main
2022-04-19 17:12:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk06.main
2022-04-19 17:12:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk07.main
2022-04-19 17:12:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk08.main
2022-04-19 17:12:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk09.main
2022-04-19 17:12:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk10.main
2022-04-19 17:12:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk11.main
2022-04-19 17:12:21 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk12.main
2022-04-19 17:12:21 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk13.main
2022-04-19 17:12:21 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk14.main
2022-04-19 17:12:21 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk15.main
2022-04-19 17:12:21 [jobmngr] Need 4 threads to start the next job (3 threads available).  Waiting for jobs to complete.
2022-04-19 17:12:21 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk16.main
2022-04-19 17:12:21 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk17.main
2022-04-19 17:12:21 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk18.main
2022-04-19 17:12:21 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk19.main
2022-04-19 17:12:21 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.chnk20.main
2022-04-19 17:12:21 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.WRITE_BARCODE_INDEX
2022-04-19 17:18:23 [runtime] (update)          ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0 chunks running (6/21 completed)
2022-04-19 17:24:23 [runtime] (update)          ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0 chunks running (9/21 completed)
2022-04-19 17:31:15 [runtime] (update)          ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0 chunks running (20/21 completed)
2022-04-19 17:32:34 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT
2022-04-19 17:32:34 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT.fork0.join
2022-04-19 17:32:34 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.ALIGN_AND_COUNT
2022-04-19 17:32:38 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.WRITE_BARCODE_SUMMARY
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.WRITE_BARCODE_SUMMARY.fork0.chnk0.main
2022-04-19 17:32:38 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.split
2022-04-19 17:32:38 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.WRITE_MATRIX_MARKET
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.WRITE_MATRIX_MARKET.fork0.chnk0.main
2022-04-19 17:32:38 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.COLLATE_METRICS
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.COLLATE_METRICS.fork0.split
2022-04-19 17:32:38 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.WRITE_H5_MATRIX
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.WRITE_H5_MATRIX.fork0.chnk0.main
2022-04-19 17:32:38 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.COLLATE_METRICS
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.COLLATE_METRICS.fork0.chnk0.main
2022-04-19 17:32:38 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk00.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk01.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk02.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk03.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk04.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk05.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk06.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk07.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk08.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk09.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk10.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk11.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk12.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk13.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk14.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk15.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk16.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk17.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk18.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk19.main
2022-04-19 17:32:38 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.chnk20.main
2022-04-19 17:32:40 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.COLLATE_METRICS
2022-04-19 17:32:40 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.COLLATE_METRICS.fork0.join
2022-04-19 17:32:40 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.COLLATE_METRICS
2022-04-19 17:32:40 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.MERGE_METRICS
2022-04-19 17:32:40 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.MERGE_METRICS.fork0.chnk0.main
2022-04-19 17:32:40 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.MERGE_METRICS
2022-04-19 17:32:41 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.WRITE_H5_MATRIX
2022-04-19 17:32:41 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.FILTER_BARCODES
2022-04-19 17:32:41 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.FILTER_BARCODES.fork0.split
2022-04-19 17:32:42 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.WRITE_MATRIX_MARKET
2022-04-19 17:32:43 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._MATRIX_COMPUTER.WRITE_BARCODE_SUMMARY
2022-04-19 17:32:43 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.FILTER_BARCODES
2022-04-19 17:32:43 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.FILTER_BARCODES.fork0.join
2022-04-19 17:33:57 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM
2022-04-19 17:33:57 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM.fork0.join
2022-04-19 17:34:54 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.FILTER_BARCODES
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_B_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.HANDLE_GEX_CELLS
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_B_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.HANDLE_GEX_CELLS
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.INFER_GEM_WELL_THROUGHPUT
2022-04-19 17:34:54 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.INFER_GEM_WELL_THROUGHPUT.fork0.split
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_T_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.HANDLE_GEX_CELLS
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_T_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER.HANDLE_GEX_CELLS
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._CELLS_REPORTER.WRITE_MOLECULE_INFO
2022-04-19 17:34:54 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._CELLS_REPORTER.WRITE_MOLECULE_INFO.fork0.chnk0.main
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_B_GEM_WELL_PROCESSOR
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_B_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.RUN_ENCLONE
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.RUN_ENCLONE
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.RUN_ENCLONE
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.RUN_ENCLONE
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_T_GEM_WELL_PROCESSOR
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.VDJ_T_GEM_WELL_PROCESSOR.SC_VDJ_CONTIG_ASSEMBLER
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.FILL_CLONOTYPE_INFO
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.FILL_CLONOTYPE_INFO
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_B_REPORTER.VLOUPE_PREPROCESS
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_B_REPORTER.VLOUPE_PREPROCESS
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.FILL_CLONOTYPE_INFO
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.FILL_CLONOTYPE_INFO
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COPY_VDJ_REFERENCE
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COPY_VDJ_REFERENCE
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_CLONOTYPE_OUTS
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_CLONOTYPE_OUTS
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.HANDLE_NO_VDJ_REF
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.HANDLE_NO_VDJ_REF
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_CONCAT_REF_OUTS
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_CONCAT_REF_OUTS
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_CONSENSUS_TXT
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_CONSENSUS_TXT
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_T_REPORTER.VLOUPE_PREPROCESS
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_T_REPORTER.VLOUPE_PREPROCESS
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_CONSENSUS_TXT
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_CONSENSUS_TXT
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_CLONOTYPE_OUTS
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_CLONOTYPE_OUTS
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.HANDLE_NO_VDJ_REF
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.HANDLE_NO_VDJ_REF
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_ANN_CSV
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_ANN_CSV
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_T_REPORTER.WRITE_CONTIG_OUTS
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_T_REPORTER.WRITE_CONTIG_OUTS
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_ANN_CSV
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_ANN_CSV
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_CONSENSUS_BAM
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_CONSENSUS_BAM
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_CONSENSUS_BAM
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_CONSENSUS_BAM
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_CONCAT_REF_OUTS
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.WRITE_CONCAT_REF_OUTS
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_B_REPORTER.WRITE_CONTIG_OUTS
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_B_REPORTER.WRITE_CONTIG_OUTS
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.CREATE_AIRR_TSV
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.CREATE_AIRR_TSV
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.CREATE_AIRR_TSV
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER.CREATE_AIRR_TSV
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_B_REPORTER.REPORT_CONTIGS
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_B_REPORTER.REPORT_CONTIGS
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_T_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_T_REPORTER.REPORT_CONTIGS
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_T_REPORTER.REPORT_CONTIGS
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.VDJ_B_CLONOTYPE_ASSIGNER.CLONOTYPE_ASSIGNER
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_B_REPORTER.SUMMARIZE_VDJ_REPORTS
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_B_REPORTER.SUMMARIZE_VDJ_REPORTS
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_B_REPORTER.WRITE_CONTIG_PROTO
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_B_REPORTER.WRITE_CONTIG_PROTO
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_T_REPORTER.SUMMARIZE_VDJ_REPORTS
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_T_REPORTER.SUMMARIZE_VDJ_REPORTS
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_B_REPORTER
2022-04-19 17:34:54 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_T_REPORTER.WRITE_CONTIG_PROTO
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_T_REPORTER.WRITE_CONTIG_PROTO
2022-04-19 17:34:54 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.VDJ_T_REPORTER
2022-04-19 17:34:55 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.INFER_GEM_WELL_THROUGHPUT
2022-04-19 17:34:55 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.INFER_GEM_WELL_THROUGHPUT.fork0.join
2022-04-19 17:34:56 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.INFER_GEM_WELL_THROUGHPUT
2022-04-19 17:34:56 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.CALL_TAGS_MARGINAL
2022-04-19 17:34:56 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.CALL_TAGS_MARGINAL.fork0.split
2022-04-19 17:34:57 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.CALL_TAGS_MARGINAL
2022-04-19 17:34:57 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.CALL_TAGS_MARGINAL.fork0.join
2022-04-19 17:34:59 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.CALL_TAGS_MARGINAL
2022-04-19 17:35:01 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._CELLS_REPORTER.WRITE_MOLECULE_INFO
2022-04-19 17:35:01 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._CELLS_REPORTER.SUBSAMPLE_READS
2022-04-19 17:35:01 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._CELLS_REPORTER.SUBSAMPLE_READS.fork0.split
2022-04-19 17:35:01 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.CALL_TAGS_JIBES
2022-04-19 17:35:01 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.CALL_TAGS_JIBES.fork0.split
2022-04-19 17:35:02 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._CELLS_REPORTER.SUBSAMPLE_READS
2022-04-19 17:35:02 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._CELLS_REPORTER.SUBSAMPLE_READS.fork0.chnk0.main
2022-04-19 17:35:02 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._CELLS_REPORTER.SUBSAMPLE_READS.fork0.chnk1.main
2022-04-19 17:35:02 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.CALL_TAGS_JIBES
2022-04-19 17:35:02 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.CALL_TAGS_JIBES.fork0.join
2022-04-19 17:35:04 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.CALL_TAGS_JIBES
2022-04-19 17:35:04 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.DETERMINE_SAMPLE_ASSIGNMENTS
2022-04-19 17:35:04 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.DETERMINE_SAMPLE_ASSIGNMENTS.fork0.chnk0.main
2022-04-19 17:35:04 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.DETERMINE_SAMPLE_ASSIGNMENTS
2022-04-19 17:35:04 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.COMPUTE_EXTRA_MULTIPLEXING_METRICS
2022-04-19 17:35:04 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.COMPUTE_EXTRA_MULTIPLEXING_METRICS.fork0.split
2022-04-19 17:35:04 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.MULTI_COLLATE_PER_SAMPLE_METRICS
2022-04-19 17:35:04 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.MULTI_COLLATE_PER_SAMPLE_METRICS
2022-04-19 17:35:04 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.MULTI_WRITE_PER_SAMPLE_MATRICES
2022-04-19 17:35:04 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.MULTI_WRITE_PER_SAMPLE_MATRICES
2022-04-19 17:35:04 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.MULTI_WRITE_PER_SAMPLE_BAM
2022-04-19 17:35:04 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.MULTI_WRITE_PER_SAMPLE_BAM
2022-04-19 17:35:04 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.MULTI_WRITE_PER_SAMPLE_MOLECULE_INFO
2022-04-19 17:35:04 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.MULTI_WRITE_PER_SAMPLE_MOLECULE_INFO
2022-04-19 17:35:04 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.STRUCTIFY_PER_SAMPLE_OUTS
2022-04-19 17:35:04 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.STRUCTIFY_PER_SAMPLE_OUTS.fork0.chnk0.main
2022-04-19 17:35:04 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.STRUCTIFY_PER_SAMPLE_OUTS
2022-04-19 17:35:04 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.SAMPLE_REPORTER
2022-04-19 17:35:04 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.DISABLE_FEATURE_STAGES
2022-04-19 17:35:04 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.DISABLE_FEATURE_STAGES.fork0.chnk0.main
2022-04-19 17:35:04 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.DISABLE_FEATURE_STAGES
2022-04-19 17:35:04 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._TARGETED_ANALYZER.SUBSAMPLE_ON_TARGET_READS
2022-04-19 17:35:04 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._TARGETED_ANALYZER.SUBSAMPLE_ON_TARGET_READS
2022-04-19 17:35:04 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.ANALYZER_PREFLIGHT
2022-04-19 17:35:04 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.ANALYZER_PREFLIGHT.fork0.chnk0.main
2022-04-19 17:35:04 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._ANTIBODY_ANALYZER.SUMMARIZE_ANTIBODY_ANALYSIS
2022-04-19 17:35:04 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._ANTIBODY_ANALYZER.SUMMARIZE_ANTIBODY_ANALYSIS
2022-04-19 17:35:04 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._ANTIBODY_ANALYZER.CALL_ANTIBODIES
2022-04-19 17:35:04 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._ANTIBODY_ANALYZER.CALL_ANTIBODIES
2022-04-19 17:35:04 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._TARGETED_ANALYZER.SUBSAMPLE_OFF_TARGET_READS
2022-04-19 17:35:04 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._TARGETED_ANALYZER.SUBSAMPLE_OFF_TARGET_READS
2022-04-19 17:35:04 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.SAMPLE_ANALYZER
2022-04-19 17:35:04 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._ANTIBODY_ANALYZER
2022-04-19 17:35:05 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.COMPUTE_EXTRA_MULTIPLEXING_METRICS
2022-04-19 17:35:05 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.COMPUTE_EXTRA_MULTIPLEXING_METRICS.fork0.join
2022-04-19 17:35:05 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.COMPUTE_EXTRA_MULTIPLEXING_METRICS
2022-04-19 17:35:05 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.MERGE_METRICS
2022-04-19 17:35:05 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.MERGE_METRICS.fork0.chnk0.main
2022-04-19 17:35:05 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._ASSIGN_TAGS.MERGE_METRICS
2022-04-19 17:35:05 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.ANALYZER_PREFLIGHT
2022-04-19 17:35:05 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.PREPROCESS_MATRIX
2022-04-19 17:35:05 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.PREPROCESS_MATRIX.fork0.split
2022-04-19 17:35:06 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.PREPROCESS_MATRIX
2022-04-19 17:35:06 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.PREPROCESS_MATRIX.fork0.join
2022-04-19 17:35:09 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.PREPROCESS_MATRIX
2022-04-19 17:35:09 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_FBPCA
2022-04-19 17:35:09 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_FBPCA
2022-04-19 17:35:09 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_MULTIGENOME_ANALYSIS
2022-04-19 17:35:09 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_MULTIGENOME_ANALYSIS.fork0.split
2022-04-19 17:35:09 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_PCA
2022-04-19 17:35:09 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_PCA.fork0.split
2022-04-19 17:35:09 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.CORRECT_CHEMISTRY_BATCH
2022-04-19 17:35:09 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.CORRECT_CHEMISTRY_BATCH
2022-04-19 17:35:09 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_PCA
2022-04-19 17:35:09 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_PCA.fork0.join
2022-04-19 17:35:10 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_MULTIGENOME_ANALYSIS
2022-04-19 17:35:10 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_MULTIGENOME_ANALYSIS.fork0.join
2022-04-19 17:35:10 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_MULTIGENOME_ANALYSIS
2022-04-19 17:35:12 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_PCA
2022-04-19 17:35:12 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.CHOOSE_DIMENSION_REDUCTION_OUTPUT
2022-04-19 17:35:12 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.CHOOSE_DIMENSION_REDUCTION_OUTPUT.fork0.chnk0.main
2022-04-19 17:35:12 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.CHOOSE_DIMENSION_REDUCTION_OUTPUT
2022-04-19 17:35:12 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_GRAPH_CLUSTERING
2022-04-19 17:35:12 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_GRAPH_CLUSTERING.fork0.split
2022-04-19 17:35:12 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_TSNE
2022-04-19 17:35:12 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_TSNE.fork0.split
2022-04-19 17:35:12 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_UMAP
2022-04-19 17:35:12 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_UMAP.fork0.split
2022-04-19 17:35:12 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_KMEANS
2022-04-19 17:35:12 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_KMEANS.fork0.split
2022-04-19 17:35:12 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_GRAPH_CLUSTERING
2022-04-19 17:35:12 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_GRAPH_CLUSTERING.fork0.join
2022-04-19 17:35:12 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_TSNE
2022-04-19 17:35:12 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_TSNE.fork0.chnk0.main
2022-04-19 17:35:12 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_UMAP
2022-04-19 17:35:12 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_UMAP.fork0.chnk0.main
2022-04-19 17:35:13 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_KMEANS
2022-04-19 17:35:13 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_KMEANS.fork0.chnk0.main
2022-04-19 17:35:13 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_KMEANS.fork0.chnk1.main
2022-04-19 17:35:13 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_KMEANS.fork0.chnk2.main
2022-04-19 17:35:13 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_KMEANS.fork0.chnk3.main
2022-04-19 17:35:13 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_KMEANS.fork0.chnk4.main
2022-04-19 17:35:13 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_KMEANS.fork0.chnk5.main
2022-04-19 17:35:13 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_KMEANS.fork0.chnk6.main
2022-04-19 17:35:13 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_KMEANS.fork0.chnk7.main
2022-04-19 17:35:13 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_KMEANS.fork0.chnk8.main
2022-04-19 17:35:14 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_GRAPH_CLUSTERING
2022-04-19 17:35:15 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_KMEANS
2022-04-19 17:35:15 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_KMEANS.fork0.join
2022-04-19 17:35:15 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.WRITE_POS_BAM
2022-04-19 17:35:19 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_KMEANS
2022-04-19 17:35:19 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_TSNE
2022-04-19 17:35:19 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_TSNE.fork0.join
2022-04-19 17:35:19 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.COMBINE_CLUSTERING
2022-04-19 17:35:19 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.COMBINE_CLUSTERING.fork0.chnk0.main
2022-04-19 17:35:19 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_TSNE
2022-04-19 17:35:20 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.COMBINE_CLUSTERING
2022-04-19 17:35:20 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION
2022-04-19 17:35:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.split
2022-04-19 17:35:20 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION
2022-04-19 17:35:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk0.main
2022-04-19 17:35:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk1.main
2022-04-19 17:35:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk2.main
2022-04-19 17:35:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk3.main
2022-04-19 17:35:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk4.main
2022-04-19 17:35:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk5.main
2022-04-19 17:35:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk6.main
2022-04-19 17:35:20 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.chnk7.main
2022-04-19 17:35:24 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_UMAP
2022-04-19 17:35:24 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_UMAP.fork0.join
2022-04-19 17:35:24 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_UMAP
2022-04-19 17:35:27 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION
2022-04-19 17:35:27 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION.fork0.join
2022-04-19 17:35:28 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.RUN_DIFFERENTIAL_EXPRESSION
2022-04-19 17:35:28 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.SUMMARIZE_ANALYSIS
2022-04-19 17:35:28 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.SUMMARIZE_ANALYSIS.fork0.split
2022-04-19 17:35:28 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.SUMMARIZE_ANALYSIS
2022-04-19 17:35:28 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.SUMMARIZE_ANALYSIS.fork0.chnk0.main
2022-04-19 17:35:29 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.SUMMARIZE_ANALYSIS
2022-04-19 17:35:29 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.SUMMARIZE_ANALYSIS.fork0.join
2022-04-19 17:35:29 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER.SC_RNA_ANALYZER.SUMMARIZE_ANALYSIS
2022-04-19 17:35:29 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.GENERATE_LIBRARY_PLOTS
2022-04-19 17:35:29 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.GENERATE_LIBRARY_PLOTS
2022-04-19 17:37:00 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._CELLS_REPORTER.SUBSAMPLE_READS
2022-04-19 17:37:00 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._CELLS_REPORTER.SUBSAMPLE_READS.fork0.join
2022-04-19 17:37:01 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._CELLS_REPORTER.SUBSAMPLE_READS
2022-04-19 17:37:01 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._CELLS_REPORTER.SUMMARIZE_BASIC_REPORTS
2022-04-19 17:37:01 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._CELLS_REPORTER.SUMMARIZE_BASIC_REPORTS.fork0.split
2022-04-19 17:37:01 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._CELLS_REPORTER.SUMMARIZE_BASIC_REPORTS
2022-04-19 17:37:01 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._CELLS_REPORTER.SUMMARIZE_BASIC_REPORTS.fork0.join
2022-04-19 17:37:06 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER._CELLS_REPORTER.SUMMARIZE_BASIC_REPORTS
2022-04-19 17:37:06 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.MERGE_METRICS
2022-04-19 17:37:06 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.MERGE_METRICS.fork0.chnk0.main
2022-04-19 17:37:06 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_GEM_WELL_PROCESSOR.COUNT_GEM_WELL_PROCESSOR._BASIC_SC_RNA_COUNTER.MERGE_METRICS
2022-04-19 17:37:06 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._TARGETED_ANALYZER.CALCULATE_TARGETED_METRICS
2022-04-19 17:37:06 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._TARGETED_ANALYZER.CALCULATE_TARGETED_METRICS
2022-04-19 17:37:06 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._TARGETED_ANALYZER.SUMMARIZE_TARGETED_ANALYSIS
2022-04-19 17:37:06 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._TARGETED_ANALYZER.SUMMARIZE_TARGETED_ANALYSIS
2022-04-19 17:37:06 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._CRISPR_ANALYZER.CALL_PROTOSPACERS
2022-04-19 17:37:06 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._CRISPR_ANALYZER.CALL_PROTOSPACERS
2022-04-19 17:37:06 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._CRISPR_ANALYZER._PERTURBATIONS_BY_TARGET
2022-04-19 17:37:06 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._CRISPR_ANALYZER._PERTURBATIONS_BY_TARGET
2022-04-19 17:37:06 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.SUMMARIZE_REPORTS
2022-04-19 17:37:06 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.SUMMARIZE_REPORTS.fork0.chnk0.main
2022-04-19 17:37:06 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._CRISPR_ANALYZER._PERTURBATIONS_BY_FEATURE
2022-04-19 17:37:06 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._CRISPR_ANALYZER._PERTURBATIONS_BY_FEATURE
2022-04-19 17:37:06 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._TARGETED_ANALYZER
2022-04-19 17:37:06 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._CRISPR_ANALYZER.SUMMARIZE_CRISPR_ANALYSIS
2022-04-19 17:37:06 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._CRISPR_ANALYZER.SUMMARIZE_CRISPR_ANALYSIS
2022-04-19 17:37:06 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.COUNT_ANALYZER._CRISPR_ANALYZER
2022-04-19 17:37:10 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.SUMMARIZE_REPORTS
2022-04-19 17:37:10 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.CLOUPE_PREPROCESS
2022-04-19 17:37:10 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.CLOUPE_PREPROCESS.fork0.split
2022-04-19 17:37:10 [runtime] (disabled)        ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_WEBSUMMARY_BUILDER
2022-04-19 17:37:10 [runtime] (split_complete)  ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.CLOUPE_PREPROCESS
2022-04-19 17:37:10 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.CLOUPE_PREPROCESS.fork0.chnk0.main
2022-04-19 17:37:19 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.CLOUPE_PREPROCESS
2022-04-19 17:37:19 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.CLOUPE_PREPROCESS.fork0.join
2022-04-19 17:37:19 [runtime] (join_complete)   ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.CLOUPE_PREPROCESS
2022-04-19 17:37:19 [runtime] (ready)           ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.CHOOSE_CLOUPE
2022-04-19 17:37:19 [runtime] (run:local)       ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.CHOOSE_CLOUPE.fork0.chnk0.main
2022-04-19 17:37:19 [runtime] (chunks_complete) ID.dimitri_RNA_only.SC_RNA_COUNTER_CS.SC_MULTI_CORE.MULTI_REPORTER.CHOOSE_CLOUPE
2022-04-19 17:37:19 [runtime] VDR killed 735 files, 79 GB.

Outputs:
- Run summary HTML:                         /scratch/etanis/software/cellranger-6.1.2/dimitri_RNA_only/outs/web_summary.html
- Run summary CSV:                          /scratch/etanis/software/cellranger-6.1.2/dimitri_RNA_only/outs/metrics_summary.csv
- BAM:                                      /scratch/etanis/software/cellranger-6.1.2/dimitri_RNA_only/outs/possorted_genome_bam.bam
- BAM index:                                /scratch/etanis/software/cellranger-6.1.2/dimitri_RNA_only/outs/possorted_genome_bam.bam.bai
- Filtered feature-barcode matrices MEX:    /scratch/etanis/software/cellranger-6.1.2/dimitri_RNA_only/outs/filtered_feature_bc_matrix
- Filtered feature-barcode matrices HDF5:   /scratch/etanis/software/cellranger-6.1.2/dimitri_RNA_only/outs/filtered_feature_bc_matrix.h5
- Unfiltered feature-barcode matrices MEX:  /scratch/etanis/software/cellranger-6.1.2/dimitri_RNA_only/outs/raw_feature_bc_matrix
- Unfiltered feature-barcode matrices HDF5: /scratch/etanis/software/cellranger-6.1.2/dimitri_RNA_only/outs/raw_feature_bc_matrix.h5
- Secondary analysis output CSV:            /scratch/etanis/software/cellranger-6.1.2/dimitri_RNA_only/outs/analysis
- Per-molecule read information:            /scratch/etanis/software/cellranger-6.1.2/dimitri_RNA_only/outs/molecule_info.h5
- CRISPR-specific analysis:                 null
- CSP-specific analysis:                    null
- Loupe Browser file:                       /scratch/etanis/software/cellranger-6.1.2/dimitri_RNA_only/outs/cloupe.cloupe
- Feature Reference:                        null
- Target Panel File:                        null
- Probe Set File:                           null

2022-04-19 17:37:19 [perform] Serializing pipestance performance data.
Waiting 6 seconds for UI to do final refresh.
Pipestance completed successfully!

2022-04-19 17:37:26 Shutting down.
2022-04-19 17:37:26 [jobmngr] Highest memory usage observed: {
  "rss": 249024618496,
  "shared": 665825280,
  "vmem": 278851489792,
  "text": 322633728,
  "stack": 256918278144,
  "proc_count": 547
}
