@include "rna/_cr_ana_stages.mro"

call RUN_DIFFERENTIAL_EXPRESSION_NG as RUN_DIFFERENTIAL_EXPRESSION(
    matrix_h5        = "/scratch/etanis/software/cellranger-6.1.2/dimitri/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/PREPROCESS_MATRIX/fork0/join-u4c9f5ebce4/files/preprocessed_matrix_h5.h5",
    clustering_h5    = "/scratch/etanis/software/cellranger-6.1.2/dimitri/SC_RNA_COUNTER_CS/SC_MULTI_CORE/COUNT_ANALYZER/SC_RNA_ANALYZER/COMBINE_CLUSTERING/fork0/chnk0-u4c9f5ebcee/files/clustering_h5.h5",
    random_seed      = null,
    max_clusters     = null,
    is_antibody_only = false,
)
