cellranger  (cellranger-6.1.2)
Copyright (c) 2021 10x Genomics, Inc.  All rights reserved.
-------------------------------------------------------------------------------
Tue May 10 16:59:18 CEST 2022

=====================================================================
System Info
uname -a
---------------------------------------------------------------------
Linux cn106 5.13.0-35-generic #40~20.04.1-Ubuntu SMP Mon Mar 7 09:18:32 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux
=====================================================================

=====================================================================
Linux Distro
cat /etc/*-release | sort -u
---------------------------------------------------------------------
BUG_REPORT_URL="https://bugs.launchpad.net/ubuntu/"
DISTRIB_CODENAME=focal
DISTRIB_DESCRIPTION="Ubuntu 20.04.4 LTS"
DISTRIB_ID=Ubuntu
DISTRIB_RELEASE=20.04
HOME_URL="https://www.ubuntu.com/"
ID=ubuntu
ID_LIKE=debian
NAME="Ubuntu"
PRETTY_NAME="Ubuntu 20.04.4 LTS"
PRIVACY_POLICY_URL="https://www.ubuntu.com/legal/terms-and-policies/privacy-policy"
SUPPORT_URL="https://help.ubuntu.com/"
UBUNTU_CODENAME=focal
VERSION="20.04.4 LTS (Focal Fossa)"
VERSION_CODENAME=focal
VERSION_ID="20.04"
=====================================================================

=====================================================================
Kernel Build
cat /proc/version
---------------------------------------------------------------------
Linux version 5.13.0-35-generic (buildd@ubuntu) (gcc (Ubuntu 9.3.0-17ubuntu1~20.04) 9.3.0, GNU ld (GNU Binutils for Ubuntu) 2.34) #40~20.04.1-Ubuntu SMP Mon Mar 7 09:18:32 UTC 2022
=====================================================================

=====================================================================
glibc version
ldd --version | head -n 1
---------------------------------------------------------------------
ldd (Ubuntu GLIBC 2.31-0ubuntu9.7) 2.31
=====================================================================

=====================================================================
CPU Model
grep -m 1 'model name' /proc/cpuinfo | cut -d ':' -f 2 | sed 's/^[ \t]*//'
---------------------------------------------------------------------
AMD EPYC 7452 32-Core Processor
=====================================================================

=====================================================================
CPU Sockets
grep 'physical id' /proc/cpuinfo | sort -u | wc -l
---------------------------------------------------------------------
1
=====================================================================

=====================================================================
CPU Cores
grep -c processor /proc/cpuinfo
---------------------------------------------------------------------
64
=====================================================================

=====================================================================
CPU Support
grep -m 1 'flags' /proc/cpuinfo | cut -d ':' -f 2 | sed 's/^\s*//'
---------------------------------------------------------------------
fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx mmxext fxsr_opt pdpe1gb rdtscp lm constant_tsc rep_good nopl nonstop_tsc cpuid extd_apicid aperfmperf pni pclmulqdq monitor ssse3 fma cx16 sse4_1 sse4_2 x2apic movbe popcnt aes xsave avx f16c rdrand lahf_lm cmp_legacy svm extapic cr8_legacy abm sse4a misalignsse 3dnowprefetch osvw ibs skinit wdt tce topoext perfctr_core perfctr_nb bpext perfctr_llc mwaitx cpb cat_l3 cdp_l3 hw_pstate ssbd mba ibrs ibpb stibp vmmcall fsgsbase bmi1 avx2 smep bmi2 cqm rdt_a rdseed adx smap clflushopt clwb sha_ni xsaveopt xsavec xgetbv1 xsaves cqm_llc cqm_occup_llc cqm_mbm_total cqm_mbm_local clzero irperf xsaveerptr rdpru wbnoinvd amd_ppin arat npt lbrv svm_lock nrip_save tsc_scale vmcb_clean flushbyasid decodeassists pausefilter pfthreshold avic v_vmsave_vmload vgif v_spec_ctrl umip rdpid overflow_recov succor smca sme sev sev_es
=====================================================================

=====================================================================
Memory Total
grep MemTotal /proc/meminfo | cut -d ':' -f 2 | sed 's/^[ \t]*//'
---------------------------------------------------------------------
1056433092 kB
=====================================================================

=====================================================================
Disk Space
df -Ph | awk '{print $2, $3, $4}'
---------------------------------------------------------------------
Size Used Avail
504G 0 504G
101G 5.1M 101G
60G 41G 17G
504G 29M 504G
5.0M 0 5.0M
504G 0 504G
21G 3.0G 17G
15G 1.1G 14G
15G 41M 15G
975M 5.3M 969M
118G 45G 68G
36T 9.4T 25T
101G 4.0K 101G
546T 535T 12T
101G 0 101G
101G 4.0K 101G
101G 0 101G
101G 0 101G
101G 0 101G
101G 0 101G
101G 0 101G
101G 0 101G
101G 0 101G
101G 0 101G
101G 0 101G
101G 0 101G
101G 0 101G
101G 0 101G
197G 69G 125G
197G 72G 121G
197G 69G 125G
197G 93G 101G
197G 112G 81G
197G 87G 106G
197G 83G 111G
197G 98G 95G
197G 74G 120G
2.0T 1002G 1.1T
197G 112G 81G
197G 81G 113G
197G 73G 121G
197G 48G 146G
197G 98G 96G
197G 101G 92G
197G 83G 111G
197G 98G 96G
197G 88G 106G
197G 85G 109G
197G 102G 91G
590G 379G 182G
196G 137G 50G
101G 0 101G
197G 96G 97G
932G 548G 384G
101G 0 101G
=====================================================================

=====================================================================
Filesystem Options
mount | cut -d ' ' -f 5,6
---------------------------------------------------------------------
sysfs (rw,nosuid,nodev,noexec,relatime)
proc (rw,nosuid,nodev,noexec,relatime)
devtmpfs (rw,nosuid,noexec,relatime,size=528161696k,nr_inodes=132040424,mode=755,inode64)
devpts (rw,nosuid,noexec,relatime,gid=5,mode=620,ptmxmode=000)
tmpfs (rw,nosuid,nodev,noexec,relatime,size=105643312k,mode=755,inode64)
ext4 (rw,relatime,errors=remount-ro)
securityfs (rw,nosuid,nodev,noexec,relatime)
tmpfs (rw,nosuid,nodev,inode64)
tmpfs (rw,nosuid,nodev,noexec,relatime,size=5120k,inode64)
tmpfs (ro,nosuid,nodev,noexec,mode=755,inode64)
cgroup2 (rw,nosuid,nodev,noexec,relatime,nsdelegate)
cgroup (rw,nosuid,nodev,noexec,relatime,xattr,name=systemd)
pstore (rw,nosuid,nodev,noexec,relatime)
efivarfs (rw,nosuid,nodev,noexec,relatime)
bpf (rw,nosuid,nodev,noexec,relatime,mode=700)
cgroup (rw,nosuid,nodev,noexec,relatime,hugetlb)
cgroup (rw,nosuid,nodev,noexec,relatime,rdma)
cgroup (rw,nosuid,nodev,noexec,relatime,net_cls,net_prio)
cgroup (rw,nosuid,nodev,noexec,relatime,memory)
cgroup (rw,nosuid,nodev,noexec,relatime,pids)
cgroup (rw,nosuid,nodev,noexec,relatime,cpuset)
cgroup (rw,nosuid,nodev,noexec,relatime,cpu,cpuacct)
cgroup (rw,nosuid,nodev,noexec,relatime,misc)
cgroup (rw,nosuid,nodev,noexec,relatime,devices)
cgroup (rw,nosuid,nodev,noexec,relatime,freezer)
cgroup (rw,nosuid,nodev,noexec,relatime,blkio)
cgroup (rw,nosuid,nodev,noexec,relatime,perf_event)
autofs (rw,relatime,fd=28,pgrp=1,timeout=0,minproto=5,maxproto=5,direct,pipe_ino=84998)
hugetlbfs (rw,relatime,pagesize=2M)
mqueue (rw,nosuid,nodev,noexec,relatime)
debugfs (rw,nosuid,nodev,noexec,relatime)
tracefs (rw,nosuid,nodev,noexec,relatime)
rpc_pipefs (rw,relatime)
fusectl (rw,nosuid,nodev,noexec,relatime)
configfs (rw,nosuid,nodev,noexec,relatime)
ext4 (rw,relatime)
ext4 (rw,relatime)
ext4 (rw,relatime)
vfat (rw,relatime,fmask=0077,dmask=0077,codepage=437,iocharset=iso8859-1,shortname=mixed,errors=remount-ro)
ext4 (rw,relatime)
ext4 (rw,relatime)
autofs (rw,relatime,fd=19,pgrp=2778720,timeout=0,minproto=5,maxproto=5,indirect,pipe_ino=223524121)
tmpfs (rw,nosuid,nodev,relatime,size=105643308k,mode=700,uid=29280,gid=29280,inode64)
ceph (rw,noatime,name=cn106,secret=<hidden>,acl)
binfmt_misc (rw,nosuid,nodev,noexec,relatime)
tmpfs (rw,nosuid,nodev,relatime,size=105643308k,mode=700,uid=13317,gid=13317,inode64)
tmpfs (rw,nosuid,nodev,relatime,size=105643308k,mode=700,uid=40205,gid=40205,inode64)
tmpfs (rw,nosuid,nodev,relatime,size=105643308k,mode=700,uid=30891,gid=30891,inode64)
tmpfs (rw,nosuid,nodev,relatime,size=105643308k,mode=700,uid=30449,gid=30449,inode64)
tmpfs (rw,nosuid,nodev,relatime,size=105643308k,mode=700,uid=14752,gid=14752,inode64)
tmpfs (rw,nosuid,nodev,relatime,size=105643308k,mode=700,uid=26052,gid=26052,inode64)
tmpfs (rw,nosuid,nodev,relatime,size=105643308k,mode=700,uid=30841,gid=30841,inode64)
tmpfs (rw,nosuid,nodev,relatime,size=105643308k,mode=700,uid=27598,gid=27598,inode64)
tmpfs (rw,nosuid,nodev,relatime,size=105643308k,mode=700,uid=37966,gid=37966,inode64)
tmpfs (rw,nosuid,nodev,relatime,size=105643308k,mode=700,uid=25850,gid=25850,inode64)
tmpfs (rw,nosuid,nodev,relatime,size=105643308k,mode=700,uid=28163,gid=28163,inode64)
tmpfs (rw,nosuid,nodev,relatime,size=105643308k,mode=700,uid=14868,gid=14868,inode64)
tmpfs (rw,nosuid,nodev,relatime,size=105643308k,mode=700,uid=38666,gid=38666,inode64)
tmpfs (rw,nosuid,nodev,relatime,size=105643308k,mode=700,uid=30800,gid=30800,inode64)
autofs (rw,relatime,fd=7,pgrp=2778720,timeout=0,minproto=5,maxproto=5,indirect,pipe_ino=223524117)
autofs (rw,relatime,fd=13,pgrp=2778720,timeout=0,minproto=5,maxproto=5,indirect,pipe_ino=223535541)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.16.142,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.16.142)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.16.142,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.16.142)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.16.142,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.16.142)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.16.142,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.16.142)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.16.142,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.16.142)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.16.142,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.16.142)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.16.142,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.16.142)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.16.142,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.16.142)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.16.142,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.16.142)
nfs4 (rw,nosuid,relatime,vers=4.2,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,clientaddr=131.174.136.191,local_lock=none,addr=131.174.136.116)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.16.142,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.16.142)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.30.206,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.30.206)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.30.206,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.30.206)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.30.206,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.30.206)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.30.206,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.30.206)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.30.206,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.30.206)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.30.206,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.30.206)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.30.206,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.30.206)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.30.206,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.30.206)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.16.142,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.16.142)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.30.206,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.30.206)
nfs4 (rw,nosuid,relatime,vers=4.2,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,clientaddr=131.174.136.191,local_lock=none,addr=131.174.30.46)
nfs4 (ro,nosuid,relatime,vers=4.2,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,clientaddr=131.174.136.191,local_lock=none,addr=131.174.30.46)
tmpfs (rw,nosuid,nodev,relatime,size=105643308k,mode=700,uid=37980,gid=37980,inode64)
nfs (rw,nosuid,relatime,vers=3,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=sys,mountaddr=131.174.30.206,mountvers=3,mountport=656,mountproto=tcp,local_lock=none,addr=131.174.30.206)
nfs4 (rw,nosuid,relatime,vers=4.2,rsize=1048576,wsize=1048576,namlen=255,hard,proto=tcp,timeo=600,retrans=6,sec=krb5,clientaddr=131.174.136.191,local_lock=none,addr=131.174.88.4)
tmpfs (rw,nosuid,nodev,relatime,size=105643308k,mode=700,uid=38551,gid=38551,inode64)
=====================================================================

=====================================================================
User Limits
bash -c 'ulimit -a'
---------------------------------------------------------------------
core file size          (blocks, -c) 0
data seg size           (kbytes, -d) unlimited
scheduling priority             (-e) 0
file size               (blocks, -f) unlimited
pending signals                 (-i) 4126263
max locked memory       (kbytes, -l) unlimited
max memory size         (kbytes, -m) unlimited
open files                      (-n) 4096
pipe size            (512 bytes, -p) 8
POSIX message queues     (bytes, -q) 819200
real-time priority              (-r) 0
stack size              (kbytes, -s) unlimited
cpu time               (seconds, -t) unlimited
max user processes              (-u) 4126263
virtual memory          (kbytes, -v) unlimited
file locks                      (-x) unlimited
=====================================================================

=====================================================================
User Limits (hard)
bash -c 'ulimit -aH'
---------------------------------------------------------------------
core file size          (blocks, -c) unlimited
data seg size           (kbytes, -d) unlimited
scheduling priority             (-e) 0
file size               (blocks, -f) unlimited
pending signals                 (-i) 4126263
max locked memory       (kbytes, -l) unlimited
max memory size         (kbytes, -m) unlimited
open files                      (-n) 4096
pipe size            (512 bytes, -p) 8
POSIX message queues     (bytes, -q) 819200
real-time priority              (-r) 0
stack size              (kbytes, -s) unlimited
cpu time               (seconds, -t) unlimited
max user processes              (-u) 4126263
virtual memory          (kbytes, -v) unlimited
file locks                      (-x) unlimited
=====================================================================

=====================================================================
Global File Limit
cat /proc/sys/fs/file-{max,nr}
---------------------------------------------------------------------
9223372036854775807
32416	0	9223372036854775807
=====================================================================

=====================================================================
Memory config
sysctl vm
---------------------------------------------------------------------
vm.admin_reserve_kbytes = 8192
vm.block_dump = 0
vm.compact_unevictable_allowed = 1
vm.compaction_proactiveness = 20
vm.dirty_background_bytes = 0
vm.dirty_background_ratio = 10
vm.dirty_bytes = 0
vm.dirty_expire_centisecs = 3000
vm.dirty_ratio = 20
vm.dirty_writeback_centisecs = 500
vm.dirtytime_expire_seconds = 43200
vm.extfrag_threshold = 500
vm.hugetlb_shm_group = 0
vm.laptop_mode = 0
vm.legacy_va_layout = 0
vm.lowmem_reserve_ratio = 256	256	32	0	0
vm.max_map_count = 65530
vm.memory_failure_early_kill = 0
vm.memory_failure_recovery = 1
vm.min_free_kbytes = 135168
vm.min_slab_ratio = 5
vm.min_unmapped_ratio = 1
vm.mmap_min_addr = 65536
vm.nr_hugepages = 0
vm.nr_hugepages_mempolicy = 0
vm.nr_overcommit_hugepages = 0
vm.numa_stat = 1
vm.numa_zonelist_order = Node
vm.oom_dump_tasks = 1
vm.oom_kill_allocating_task = 0
vm.overcommit_kbytes = 0
vm.overcommit_memory = 2
vm.overcommit_ratio = 90
vm.page-cluster = 3
vm.page_lock_unfairness = 5
vm.panic_on_oom = 0
vm.percpu_pagelist_fraction = 0
vm.stat_interval = 1
vm.swappiness = 1
vm.unprivileged_userfaultfd = 0
vm.user_reserve_kbytes = 131072
vm.vfs_cache_pressure = 100
vm.watermark_boost_factor = 0
vm.watermark_scale_factor = 10
vm.zone_reclaim_mode = 0
=====================================================================

=====================================================================
THP memory config
cat /sys/kernel/mm/*transparent_hugepage/enabled
---------------------------------------------------------------------
always [madvise] never
=====================================================================

=====================================================================
cgroups
cat /proc/self/cgroup
---------------------------------------------------------------------
13:perf_event:/
12:blkio:/user.slice
11:freezer:/
10:devices:/user.slice
9:misc:/
8:cpu,cpuacct:/user.slice
7:cpuset:/
6:pids:/user.slice/user-29280.slice/session-33.scope
5:memory:/user.slice/user-29280.slice/session-33.scope
4:net_cls,net_prio:/
3:rdma:/
2:hugetlb:/
1:name=systemd:/user.slice/user-29280.slice/session-33.scope
0::/user.slice/user-29280.slice/session-33.scope
=====================================================================

=====================================================================
cgroup mem stats
cat /sys/fs/cgroup/memory/user.slice/user-29280.slice/session-33.scope/memory.stat
---------------------------------------------------------------------
cache 86979891200
rss 8675328
rss_huge 0
shmem 0
mapped_file 1732608
dirty 1503232
writeback 0
swap 14086144
pgpgin 3163035115
pgpgout 3142121094
pgfault 7382116443
pgmajfault 45639
inactive_anon 14008320
active_anon 9326592
inactive_file 37612195840
active_file 49367695360
unevictable 0
hierarchical_memory_limit 9223372036854771712
hierarchical_memsw_limit 9223372036854771712
total_cache 86979891200
total_rss 8675328
total_rss_huge 0
total_shmem 0
total_mapped_file 1732608
total_dirty 1503232
total_writeback 0
total_swap 14086144
total_pgpgin 3163035115
total_pgpgout 3142121094
total_pgfault 7382116443
total_pgmajfault 45639
total_inactive_anon 14008320
total_active_anon 9326592
total_inactive_file 37612195840
total_active_file 49367695360
total_unevictable 0
=====================================================================

=====================================================================
memory soft limit
cat /sys/fs/cgroup/memory/user.slice/user-29280.slice/session-33.scope/memory.*soft_limit_in_bytes
---------------------------------------------------------------------
9223372036854771712
=====================================================================

=====================================================================
memory hard limit
cat /sys/fs/cgroup/memory/user.slice/user-29280.slice/session-33.scope/memory.limit_in_bytes
---------------------------------------------------------------------
9223372036854771712
=====================================================================

=====================================================================
memory swap limit
cat /sys/fs/cgroup/memory/user.slice/user-29280.slice/session-33.scope/memory.memsw.limit_in_bytes
---------------------------------------------------------------------
9223372036854771712
=====================================================================

=====================================================================
Container
[ -e /.dockerenv ] || [ -e /.dockerinit ] || [ ! -z "$container" ] || grep -m 1 -E 'docker|lxc' /proc/1/cgroup > /dev/null && echo 'Detected'
---------------------------------------------------------------------
=====================================================================

=====================================================================
init process
head -n 1 /proc/1/sched | cut -d ' ' -f 1
---------------------------------------------------------------------
systemd
=====================================================================

=====================================================================
SGE Submit
which qsub
---------------------------------------------------------------------
=====================================================================

=====================================================================
LSF Submit
which bsub
---------------------------------------------------------------------
=====================================================================

=====================================================================
BCL2FASTQ 1
which configureBclToFastq.pl
---------------------------------------------------------------------
=====================================================================

=====================================================================
BCL2FASTQ 2
which bcl2fastq
---------------------------------------------------------------------
=====================================================================

=====================================================================
Java
which java
---------------------------------------------------------------------
/usr/bin/java
=====================================================================

=====================================================================
Java Version
java -version 2>&1 | cat
---------------------------------------------------------------------
openjdk version "11.0.15" 2022-04-19
OpenJDK Runtime Environment (build 11.0.15+10-Ubuntu-0ubuntu0.20.04.1)
OpenJDK 64-Bit Server VM (build 11.0.15+10-Ubuntu-0ubuntu0.20.04.1, mixed mode, sharing)
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=====================================================================
10X Refdata
echo $TENX_REFDATA
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10X Refdata Version
cat $TENX_REFDATA/version
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qconf
which qconf
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slurm info
sinfo -O nodes,maxcpuspernode,memory,time
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NODES               MAX_CPUS_PER_NODE   MEMORY              TIMELIMIT           
12                  UNLIMITED           128000+             infinite            
2                   UNLIMITED           256000              7-00:00:00          
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MRP
mrp --version
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v4.0.6
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mrp templates
ls $(dirname $(dirname $(which mrp)))/jobmanagers/*.template
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