Sequence N-term cleavage window C-term cleavage window Amino acid before First amino acid Second amino acid Second last amino acid Last amino acid Amino acid after A Count R Count N Count D Count C Count Q Count E Count G Count H Count I Count L Count K Count M Count F Count P Count S Count T Count W Count Y Count V Count U Count Length Missed cleavages Mass Proteins Leading razor protein Start position End position Gene names Protein names Unique (Groups) Unique (Proteins) Charges PEP Score Identification type g10_con Identification type g10_MTA2 Identification type g13_con Identification type g13_MTA2 Identification type g15_con Identification type g15_MTA2 Experiment g10_con Experiment g10_MTA2 Experiment g13_con Experiment g13_MTA2 Experiment g15_con Experiment g15_MTA2 Intensity Intensity g10_con Intensity g10_MTA2 Intensity g13_con Intensity g13_MTA2 Intensity g15_con Intensity g15_MTA2 Reverse Potential contaminant id Protein group IDs Mod. peptide IDs Evidence IDs MS/MS IDs Best MS/MS Oxidation (M) site IDs MS/MS Count AAAAAAAAAPAAAATAPTTAATTAATAAQ KNKTKKTKAAAAAAAA TTAATAAQ________ K A A A Q - 20 0 0 0 0 1 0 0 0 0 0 0 0 0 2 0 6 0 0 0 0 29 0 2367.203 P37108;H0YLW0 P37108 108 136 SRP14 Signal recognition particle 14 kDa protein yes no 2;3 7.2355E-77 110.89 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 4 2 2 2 2503400000 484120000 446850000 600310000 341240000 103390000 527450000 0 903 0 0;1;2;3;4;5;6;7;8;9;10;11;12;13 0;1;2;3;4;5;6;7;8;9;10;11;12;13;14;15;16 13 17 AAAAAAAAAVSR RGGRDRGRAAAAAAAA AAAAAVSRRRKAEYPR R A A S R R 9 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 12 0 999.54614 Q96JP5-2;H9KV86;Q96JP5 Q96JP5-2 59 70 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes no 2 0.0018566 84.169 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 13653000 1122400 909770 1038800 559980 3730900 6290900 1 677 1 14;15;16;17;18;19;20 17;18;19;20;21 19 5 AAAAAAALQAK NHKLRVDKAAAAAAAL AAAALQAKSDEKAAVA K A A A K S 8 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 11 0 955.54508 E7EWF1;P36578;H3BU31;H3BM89 E7EWF1 354 364 RPL4 60S ribosomal protein L4 yes no 2 6.7664E-09 112.71 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 20922000 2471500 4119500 6347200 1728300 1300200 4955600 2 392 2 21;22;23;24;25;26 22;23;24;25;26;27 24 4 AAAAAAAPSGGGGGGEEER ________________ GGGGEEERLEEKSEDQ M A A E R L 7 1 0 0 0 0 3 6 0 0 0 0 0 0 1 1 0 0 0 0 0 19 0 1584.7128 P51608-2 P51608-2 2 20 MECP2 Methyl-CpG-binding protein 2 yes yes 2 0.037372 41.422 By matching By matching By matching By matching By MS/MS By matching 1 0 0 0 0 0 0 0 3 953 3 27 28 28 1 AAAAAETPEVLRECGCK ________________ VLRECGCKGIRTCLIC M A A C K G 5 1 0 0 2 0 3 1 0 0 1 1 0 0 1 0 1 0 0 1 0 17 1 1831.8557 Q9NXW9-2;Q9NXW9 Q9NXW9-2 2 18 ALKBH4 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 yes no 2 8.4116E-133 148.7 By matching By MS/MS By matching By matching By matching By matching 1 1 5990300 0 4388300 0 1602100 0 0 4 1561 4 28;29 29 29 1 AAAAAWEEPSSGNGTAR ________________ SSGNGTARAGPRKRGG K A A A R A 6 1 1 0 0 0 2 2 0 0 0 0 0 0 1 2 1 1 0 0 0 17 0 1644.7492 Q9P258 Q9P258 6 22 RCC2 Protein RCC2 yes yes 2;3 4.5456E-14 100.43 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 2 187610000 13176000 0 19691000 11523000 46568000 96651000 5 1575 5 30;31;32;33;34;35;36 30;31;32;33;34;35;36 32 7 AAAAAWEEPSSGNGTARAGPR ________________ GTARAGPRKRGGPAGR K A A P R K 7 2 1 0 0 0 2 3 0 0 0 0 0 0 2 2 1 1 0 0 0 21 1 2025.9617 Q9P258 Q9P258 6 26 RCC2 Protein RCC2 yes yes 3 0.00066295 54.768 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 12480000 2812700 2857500 1848900 1017100 1831800 2111900 6 1575 6 37;38;39;40;41;42 37;38;39;40 40 4 AAAAAWEEPSSGNGTARAGPRK ________________ TARAGPRKRGGPAGRK K A A R K R 7 2 1 0 0 0 2 3 0 0 0 1 0 0 2 2 1 1 0 0 0 22 2 2154.0566 Q9P258 Q9P258 6 27 RCC2 Protein RCC2 yes yes 3;4 0.0003161 58.712 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 2 2 117730000 21267000 12789000 30412000 21608000 18403000 13256000 7 1575 7 43;44;45;46;47;48;49;50;51;52;53 41;42;43;44;45;46;47;48;49 47 9 AAAADSFSGGPAGVRLPRSPPLK ________________ LPRSPPLKVLAEQLRR M A A L K V 5 2 0 1 0 0 0 3 0 0 2 1 0 1 4 3 0 0 0 1 0 23 2 2221.1967 Q96E14;I3L2E0 Q96E14 2 24 RMI2 RecQ-mediated genome instability protein 2 yes no 3 0.00097221 52.814 By matching By MS/MS By matching By matching By matching By matching 1 14925000 0 14925000 0 0 0 0 8 1378 8 54 50 50 1 AAAAPAGGNPEQRLDYER TMRSAVFKAAAAPAGG EQRLDYERAAALGGPE K A A E R A 5 2 1 1 0 1 2 2 0 0 1 0 0 0 2 0 0 0 1 0 0 18 1 1884.9078 Q68DK7 Q68DK7 10 27 MSL1 Male-specific lethal 1 homolog yes yes 3 0.0095129 42.52 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 22815000 3230200 3914400 3137800 1042500 3807800 7682700 9 1218 9 55;56;57;58;59;60 51;52 52 2 AAAAPDSRVSEEENLK ________________ VSEEENLKKTPKKKMK M A A L K K 4 1 1 1 0 0 3 0 0 0 1 1 0 0 1 2 0 0 0 1 0 16 1 1685.822 Q9Y3B9 Q9Y3B9 2 17 RRP15 RRP15-like protein yes yes 2 7.4772E-164 158.65 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 38370000 0 6954200 5823400 4229100 9094400 12269000 10 1644 10 61;62;63;64;65 53;54;55;56;57;58 55 6 AAAATGGTGPGAGIGAATGTGGSSEPSACSDHPIPGCSLKEEEK CNSFLQEKAAAATGGT CSLKEEEKQHSQPQQQ K A A E K Q 8 0 0 1 2 0 4 10 1 2 1 2 0 0 4 5 4 0 0 0 0 44 1 4067.8437 P28356 P28356 217 260 HOXD9 Homeobox protein Hox-D9 yes yes 4 0.00053927 19.941 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 3793200 3025900 0 0 0 767370 0 11 884 11 66;67 59;60 60 2 AAADAEAVPARGEPQQDCCVK ________________ PQQDCCVKTELLGEET M A A V K T 6 1 0 2 2 2 2 1 0 0 0 1 0 0 2 0 0 0 0 2 0 21 1 2242.0107 Q9H9B1-3;Q9H9B1;Q9H9B1-4 Q9H9B1-3 2 22 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes no 3 0.0010034 69.081 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 14860000 0 4139800 2906800 1420000 2142700 4250800 12 1507 12 68;69;70;71;72 61;62;63 63 1 AAAEALSFTK SQSSGELKAAAEALSF AEALSFTKCSSAISKA K A A T K C 4 0 0 0 0 0 1 0 0 0 1 1 0 1 0 1 1 0 0 0 0 10 0 1007.5288 Q96QE3 Q96QE3 1710 1719 ATAD5 ATPase family AAA domain-containing protein 5 yes yes 2 0.0087186 79.659 By matching By MS/MS By matching By matching By matching By matching 1 1 11027000 0 8525700 2501200 0 0 0 13 1415 13 73;74 64 64 1 AAAEQAISVR EQAKEACKAAAEQAIS AEQAISVRQQVVLENA K A A V R Q 4 1 0 0 0 1 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 10 0 1014.5458 Q01780;Q01780-2 Q01780 759 768 EXOSC10 Exosome component 10 yes no 2 1.3004E-23 125.74 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 13745000 0 1927700 2718000 820100 3199800 5079000 14 1030 14 75;76;77;78;79 65;66;67;68;69 68 5 AAAEQAISVRQQVVLENAAKK EQAKEACKAAAEQAIS VLENAAKKRERATSDP K A A K K R 6 1 1 0 0 3 2 0 0 1 1 2 0 0 0 1 0 0 0 3 0 21 2 2223.2335 Q01780;Q01780-2 Q01780 759 779 EXOSC10 Exosome component 10 yes no 3;4 2.3543E-05 61.015 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 1 1 2 19840000 0 3836300 7725700 1512200 1216500 5548800 15 1030 15 80;81;82;83;84;85;86;87 70;71;72;73;74;75 70 5 AAAGGGGGGAAAAGR ________________ GGAAAAGRAYSFKVVL M A A G R A 7 1 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 1070.5217 Q9UL25 Q9UL25 2 16 RAB21 Ras-related protein Rab-21 yes yes 2 0.00028599 72.891 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 952730 0 310910 0 0 0 641820 16 1605 16 88;89 76;77 76 2 AAAGGGGGGAAAAGRAYSFK ________________ AGRAYSFKVVLLGEGC M A A F K V 8 1 0 0 0 0 0 7 0 0 0 1 0 1 0 1 0 0 1 0 0 20 1 1666.8176 Q9UL25 Q9UL25 2 21 RAB21 Ras-related protein Rab-21 yes yes 2 0.00020092 65.105 By matching By MS/MS By matching By matching By matching By matching 1 1 1 4376800 0 1113800 1008000 0 0 2255100 17 1605 17 90;91;92 78 78 1 AAAGPSTRASSAAAAAALSR ________________ AAAAALSRRGRRGRCD M A A S R R 10 2 0 0 0 0 0 1 0 0 1 0 0 0 1 4 1 0 0 0 0 20 1 1756.918 Q8NCN4 Q8NCN4 2 21 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 3 0.0020937 71.148 By MS/MS By matching By matching By matching By matching By matching 1 4217800 4217800 0 0 0 0 0 18 1318 18 93 79 79 1 AAAGQESEGPAVGPPQPLGK AAERGEMKAAAGQESE GPPQPLGKELQDGAES K A A G K E 4 0 0 0 0 2 2 4 0 0 1 1 0 0 4 1 0 0 0 1 0 20 0 1859.9377 O14497-2;O14497 O14497-2 52 71 ARID1A AT-rich interactive domain-containing protein 1A yes no 2 0.0015047 52.185 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 2 1 1 1 6810800 916270 1134200 1401600 607410 0 2751300 19 694 19 94;95;96;97;98;99 80;81;82 82 3 AAAGWRDGSGQEK ________________ RDGSGQEKYRLVVVGG M A A E K Y 3 1 0 1 0 1 1 3 0 0 0 1 0 0 0 1 0 1 0 0 0 13 1 1331.6218 E9PQK5;E9PQC5;P62070;B7Z5Z2 E9PQK5 2 14 RRAS2 Ras-related protein R-Ras2 yes no 2 0.0020704 87.083 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 5281900 0 722820 1009500 463030 563310 2523200 20 192 20 100;101;102;103;104 83;84 84 2 AAAMDVDTPSGTNSGAGK ________________ GTNSGAGKKRFEVKKW M A A G K K 4 0 1 2 0 0 0 3 0 0 0 1 1 0 1 2 2 0 0 1 0 18 0 1648.7363 P62877 P62877 2 19 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes yes 2 0.00091761 55.782 By matching By matching By matching By matching By matching By MS/MS 1 1 1812000 0 0 391260 0 0 1420700 21 996 21 105;106 85 85 1 AAAMDVDTPSGTNSGAGKK ________________ TNSGAGKKRFEVKKWN M A A K K R 4 0 1 2 0 0 0 3 0 0 0 2 1 0 1 2 2 0 0 1 0 19 1 1776.8312 P62877 P62877 2 20 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes yes 2 0.00032212 71.402 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 17914000 0 4631200 6818000 2855700 3608700 0 22 996 22 107;108;109;110 86;87 87 2 AAAPAPVSEAVCR TEKTEESKAAAPAPVS PVSEAVCRTSMCSIQS K A A C R T 5 1 0 0 1 0 1 0 0 0 0 0 0 0 2 1 0 0 0 2 0 13 0 1297.6449 G5E9D3;P20810-5;E7ESM9;P20810-7;P20810-6;B7Z468;H0Y7F0;P20810-3;E9PDE4;E7ES10;P20810-4;E9PCH5;G5E946;B7Z574;P20810-2;P20810;H0Y9H6;E7EVY3;E7EQ12;E7EQA0;H0YD33 G5E9D3 439 451 CAST Calpastatin yes no 2 0.00073145 92.19 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 10267000 147680 1468400 834650 1103900 3103500 3609300 23 375 23 111;112;113;114;115;116 88;89;90;91 90 4 AAAPQAPGR ________________ AAPQAPGRGSLRKTRP M A A G R G 4 1 0 0 0 1 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 9 0 837.4457 Q5VUC9;Q5VUC3;P78345 Q5VUC9 2 10 RPP38 Ribonuclease P protein subunit p38 yes no 2 0.018344 57.59 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 24 1009 24 117 92 92 1 AAAPQAPGRGSLRK ________________ PGRGSLRKTRPLVVKT M A A R K T 4 2 0 0 0 1 0 2 0 0 1 1 0 0 2 1 0 0 0 0 0 14 2 1378.7793 Q5VUC9;Q5VUC3;P78345 Q5VUC9 2 15 RPP38 Ribonuclease P protein subunit p38 yes no 3 0.027403 42.629 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 35396000 4699100 6698200 8261500 238550 8286100 7212400 25 1009 25 118;119;120;121;122;123 93 93 1 AAAPSEDPWQAVK DPLQTSGKAAAPSEDP EDPWQAVKSLTQARLL K A A V K S 4 0 0 1 0 1 1 0 0 0 0 1 0 0 2 1 0 1 0 1 0 13 0 1368.6674 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 2250 2262 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 2 0.012023 53.448 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 4076800 0 1863300 0 0 0 2213600 26 1404 26 124;125 94;95 95 2 AAAQQLGEVVK GTTPVTRKAAAQQLGE QQLGEVVKLHPHELNN K A A V K L 3 0 0 0 0 2 1 1 0 0 1 1 0 0 0 0 0 0 0 2 0 11 0 1112.619 O14981 O14981 24 34 BTAF1 TATA-binding protein-associated factor 172 yes yes 2 0.0030617 84.479 By matching By matching By matching By matching By matching By MS/MS 1 837980 0 0 0 0 0 837980 27 700 27 126 96 96 1 AAASGYTDLREK ________________ GYTDLREKLKSMTSRD M A A E K L 3 1 0 1 0 0 1 1 0 0 1 1 0 0 0 1 1 0 1 0 0 12 1 1280.6361 Q6P6C2-2;Q6P6C2 Q6P6C2-2 2 13 ALKBH5 RNA demethylase ALKBH5 yes no 2 7.4548E-13 112.64 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 20463000 1816900 3626100 3682400 0 3474500 7863300 28 1227 28 127;128;129;130;131;132 97;98;99;100;101;102 99 6 AAASGYTDLREKLK ________________ TDLREKLKSMTSRDNY M A A L K S 3 1 0 1 0 0 1 1 0 0 2 2 0 0 0 1 1 0 1 0 0 14 2 1521.8151 Q6P6C2-2;Q6P6C2 Q6P6C2-2 2 15 ALKBH5 RNA demethylase ALKBH5 yes no 3 0.0031658 61.03 By MS/MS By matching By matching By matching By matching By matching 1 6975800 6975800 0 0 0 0 0 29 1227 29 133 103 103 1 AAATGAVAASAASGQAEGK ________________ ASGQAEGKKITDLRVI M A A G K K 9 0 0 0 0 1 1 3 0 0 0 1 0 0 0 2 1 0 0 1 0 19 0 1587.7853 Q9NWH9;H7BXE3;H0YL55;H0YLW7;H0YMW8;H0YNF3;H0YMR6;H0YLE6 Q9NWH9 2 20 SLTM SAFB-like transcription modulator yes no 2 2.7877E-06 85.087 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 2 2 2 26808000 6915200 5611400 6590600 3765000 3925600 0 30 1554 30 134;135;136;137;138;139;140;141 104;105;106;107;108 106 4 AAATGAVAASAASGQAEGKK ________________ SGQAEGKKITDLRVID M A A K K I 9 0 0 0 0 1 1 3 0 0 0 2 0 0 0 2 1 0 0 1 0 20 1 1715.8802 Q9NWH9;H7BXE3;H0YL55;H0YLW7;H0YMW8;H0YNF3;H0YMR6;H0YLE6 Q9NWH9 2 21 SLTM SAFB-like transcription modulator yes no 2 0.0008547 56.719 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 8244200 0 1790100 1146700 0 886210 4421200 31 1554 31 142;143;144;145 109;110 110 2 AAATGDPGLSK ________________ TGDPGLSKLQFAPFSS M A A S K L 3 0 0 1 0 0 0 2 0 0 1 1 0 0 1 1 1 0 0 0 0 11 0 986.50327 E9PB95;O95352-2;O95352;C9JGL2;F8WDY9;C9JNU2;C9JKA3;C9JE55;C9J415;C9JFF4 E9PB95 2 12 ATG7 Ubiquitin-like modifier-activating enzyme ATG7 yes no 2 0.030197 43.68 By matching By matching By matching By matching By matching By MS/MS 1 1 682250 174360 0 0 0 0 507880 32 404 32 146;147 111 111 1 AAAVAVAAASRR ________________ AVAAASRRQSCYLCDL M A A R R Q 7 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 0 12 1 1112.6414 Q7Z5L9-2;Q7Z5L9 Q7Z5L9-2 2 13 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes no 2 0.00024281 96.229 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 6526700 0 2855400 0 779540 0 2891800 33 1254 33 148;149;150 112;113 113 2 AAAYSAQVQPVDGATR REALRALRAAAYSAQV QPVDGATRKKSQRVCR R A A T R K 5 1 0 1 0 2 0 1 0 0 0 0 0 0 1 1 1 0 1 2 0 16 0 1603.7954 Q9H7E9;Q9H7E9-2 Q9H7E9 183 198 C8orf33 UPF0488 protein C8orf33 yes no 2 0.0084668 53.255 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 6286900 998120 424600 0 446650 2414000 2003500 34 1499 34 151;152;153;154;155 114;115;116 115 2 AAAYSAQVQPVDGATRK REALRALRAAAYSAQV PVDGATRKKSQRVCRP R A A R K K 5 1 0 1 0 2 0 1 0 0 0 1 0 0 1 1 1 0 1 2 0 17 1 1731.8904 Q9H7E9;Q9H7E9-2 Q9H7E9 183 199 C8orf33 UPF0488 protein C8orf33 yes no 3 0.00063287 73.833 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 8655900 1069200 386880 725090 919210 3416000 2139500 35 1499 35 156;157;158;159;160;161 117;118 117 2 AAAYSAQVQPVDGATRKK REALRALRAAAYSAQV VDGATRKKSQRVCRPR R A A K K S 5 1 0 1 0 2 0 1 0 0 0 2 0 0 1 1 1 0 1 2 0 18 2 1859.9854 Q9H7E9;Q9H7E9-2 Q9H7E9 183 200 C8orf33 UPF0488 protein C8orf33 yes no 3 0.028547 42.708 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 4688400 861510 0 632340 728840 1473900 991780 36 1499 36 162;163;164;165;166 119 119 1 AADEVAGGARK ________________ EVAGGARKATKSKLFE M A A R K A 4 1 0 1 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 1 0 11 1 1043.536 Q6STE5 Q6STE5 2 12 SMARCD3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 yes yes 2 0.010202 67.385 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 5830200 621790 678980 1540800 785840 1045900 1156800 37 1234 37 167;168;169;170;171;172 120;121 121 2 AADISESSGADCKGDPR ________________ ADCKGDPRNSAKLDAD M A A P R N 3 1 0 3 1 0 1 2 0 1 0 1 0 0 1 3 0 0 0 0 0 17 1 1734.7479 F8VVL1;O43583 F8VVL1 2 18 DENR Density-regulated protein yes no 2 0.0024745 56.121 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 9606400 0 1124800 1749200 2374100 2200300 2158000 38 544 38 173;174;175;176;177 122 122 1 AADISESSGADCKGDPRNSAK ________________ GDPRNSAKLDADYPLR M A A A K L 4 1 1 3 1 0 1 2 0 1 0 2 0 0 1 4 0 0 0 0 0 21 2 2134.9549 F8VVL1;O43583 F8VVL1 2 22 DENR Density-regulated protein yes no 3 3.2778E-05 60.093 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 32670000 0 0 8107200 8303000 6854800 9404800 39 544 39 178;179;180;181 123;124;125 123 3 AADISLDNLVEGKRK EAVTPLTKAADISLDN NLVEGKRKRRSNVSSP K A A R K R 2 1 1 2 0 0 1 1 0 1 2 2 0 0 0 1 0 0 0 1 0 15 2 1627.8893 Q12888;Q12888-2;A6NNK5;F8VY86;H7BZY0 Q12888 1614 1628 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 4 0.0035826 55.335 By matching By matching By matching By matching By matching By MS/MS 1 7343300 0 0 0 0 0 7343300 40 1063 40 182 126 126 1 AADLLAVHAVK AVAESEDRAADLLAVH LLAVHAVKIEANVNSV R A A V K I 4 0 0 1 0 0 0 0 1 0 2 1 0 0 0 0 0 0 0 2 0 11 0 1106.6448 Q8NFC6 Q8NFC6 1627 1637 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 3.0955E-05 102.95 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2173300 195950 935570 0 0 0 1041800 41 1325 41 183;184;185 127;128 127 2 AADQFDIYSSQQSK CLNEDAMRAADQFDIY IYSSQQSKYSHTVNHK R A A S K Y 2 0 0 2 0 3 0 0 0 1 0 1 0 1 0 3 0 0 1 0 0 14 0 1586.7213 Q7Z6I8;H0YAE0;Q7Z6I8-2 Q7Z6I8 28 41 C5orf24 UPF0461 protein C5orf24 yes no 2 0.0041826 58.079 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2555600 190520 0 0 0 326730 2038400 42 1256 42 186;187;188 129 129 1 AADRLEQELLRDTVK VRRKKEEKAADRLEQE ELLRDTVKFGEVVLQP K A A V K F 2 2 0 2 0 1 2 0 0 0 3 1 0 0 0 0 1 0 0 1 0 15 2 1755.9479 Q6PK04;I3L0U5 Q6PK04 183 197 CCDC137 Coiled-coil domain-containing protein 137 yes no 4 0.0015012 68.171 By matching By matching By matching By MS/MS By matching By matching 1 2621500 0 0 0 2621500 0 0 43 679 43 189 130;131 131 2 AADSDDGAVSAPAASDGGVSK ________________ ASDGGVSKSTTSGEEL M A A S K S 6 0 0 4 0 0 0 3 0 0 0 1 0 0 1 4 0 0 0 2 0 21 0 1846.8181 Q96GM8 Q96GM8 2 22 TOE1 Target of EGR1 protein 1 yes yes 2;3 5.5918E-92 130.05 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 3 1 3 2 3 4 80757000 14078000 663160 22878000 5686500 10012000 27440000 44 1389 44;45 190;191;192;193;194;195;196;197;198;199;200;201;202;203;204;205 132;133;134;135;136;137;138;139;140 138 9 AADSICDGDLVDSQIR KHLMLLSRAADSICDG DLVDSQIRSKQNWSLL R A A I R S 2 1 0 4 1 1 0 1 0 2 1 0 0 0 0 2 0 0 0 1 0 16 0 1733.789 P35251-2;P35251 P35251-2 910 925 RFC1 Replication factor C subunit 1 yes no 2 7.9421E-05 75.376 By matching By MS/MS By matching By matching By matching By matching 1 1 5628900 0 3542600 0 2086300 0 0 45 896 46 206;207 141 141 0 AAEAFLRQQQAAPNLRK WKEDLSRKAAEAFLRQ QAAPNLRKLIYGTVTE K A A R K L 5 2 1 0 0 3 1 0 0 0 2 1 0 1 1 0 0 0 0 0 0 17 2 1911.0439 Q14692 Q14692 675 691 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 3 0.011138 67.136 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2 5369300 927400 1102700 0 0 1175400 2163800 46 1113 47 208;209;210;211;212 142;143 143 2 AAEESASQIQSSAQR QRTRQMIRAAEESASQ QIQSSAQRLETQVSAS R A A Q R L 4 1 0 0 0 3 2 0 0 1 0 0 0 0 0 4 0 0 0 0 0 15 0 1561.7332 Q13751 Q13751 855 869 LAMB3 Laminin subunit beta-3 yes yes 2 0.00267 58.723 By matching By matching By matching By matching By matching By MS/MS 1 1144200 0 0 0 0 0 1144200 47 1091 48 213 144 144 1 AAEGVSAADMAK GLIRAGTKAAEGVSAA VSAADMAKRERFELLK K A A A K R 5 0 0 1 0 0 1 1 0 0 0 1 1 0 0 1 0 0 0 1 0 12 0 1119.523 E9PDD9;Q9NW13 E9PDD9 313 324 RBM28 RNA-binding protein 28 yes no 2 0.0019375 89.44 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 1 1 13132000 2761500 1556600 1523500 1373000 3225500 2691800 48 422 49 214;215;216;217;218;219;220;221 145;146;147;148;149;150 147 6 AAEIASSDSANVSSRGGK PFDKIIEKAAEIASSD NVSSRGGKKFLPVLKE K A A G K K 4 1 1 1 0 0 1 2 0 1 0 1 0 0 0 5 0 0 0 1 0 18 1 1705.8231 P42338 P42338 515 532 PIK3CB Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform yes yes 3 0.005056 46.892 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 2936000 292350 767010 710980 385360 0 780340 49 915 50 222;223;224;225;226 151 151 1 AAEISAMLK ASTFAQARAAEISAML AEISAMLKAVTQKSSN R A A L K A 3 0 0 0 0 0 1 0 0 1 1 1 1 0 0 1 0 0 0 0 0 9 0 932.5001 Q99575;E5RK39 Q99575 112 120 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 2 0.011969 82.287 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 11734000 572480 3725500 0 1830900 2260300 3344600 50 1428 51 227;228;229;230;231 152;153;154 153 3 AAELVEAK ________________ AAELVEAKNMVMSFRV M A A A K N 3 0 0 0 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 1 0 8 0 829.45453 Q8N2W9 Q8N2W9 2 9 PIAS4 E3 SUMO-protein ligase PIAS4 yes yes 1;2 0.0016314 113.41 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 2 2 12066000 0 2126500 1301700 484370 0 8153100 51 1295 52 232;233;234;235;236;237;238;239 155;156;157;158;159 158 5 AAESHWGLPVQK GQAKDSIKAAESHWGL HWGLPVQKLEKVNQTQ K A A Q K L 2 0 0 0 0 1 1 1 1 0 1 1 0 0 1 1 0 1 0 1 0 12 0 1321.6779 Q5VYV7 Q5VYV7 228 239 SLX4IP Protein SLX4IP yes yes 3 0.032229 60.691 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 52 1211 53 240 160 160 1 AAESVSKPDVSEEAPGPSK EKKTKKPKAAESVSKP EEAPGPSKVKTGKPEE K A A S K V 3 0 0 1 0 0 3 1 0 0 0 2 0 0 3 4 0 0 0 2 0 19 1 1883.9113 Q9BY42;A8MSH5;A2A2L5 Q9BY42 204 222 RTFDC1 Protein RTF2 homolog yes no 3 0.00046343 65.924 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 7670000 0 1787700 997030 752940 1663700 2468600 53 38 54 241;242;243;244;245 161;162;163;164 164 4 AAESVSKPDVSEEAPGPSKVK EKKTKKPKAAESVSKP APGPSKVKTGKPEEAS K A A V K T 3 0 0 1 0 0 3 1 0 0 0 3 0 0 3 4 0 0 0 3 0 21 2 2111.0746 Q9BY42;A8MSH5;A2A2L5 Q9BY42 204 224 RTFDC1 Protein RTF2 homolog yes no 3;4 4.4651E-91 128.66 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 3 1 2 2 2 157480000 12594000 63582000 15385000 19374000 30423000 16123000 54 38 55 246;247;248;249;250;251;252;253;254;255;256 165;166;167;168;169;170;171;172 172 7 AAEVLPSAR ________________ AEVLPSARWQYCGAPD M A A A R W 3 1 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 9 0 912.50288 Q9GZS1-2;B4DW33 Q9GZS1-2 2 10 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes no 2 0.00366 96.665 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 2 14376000 4813200 0 0 1955100 0 7607900 55 1475 56 257;258;259;260 173;174;175 174 3 AAFGGSGGRGSSSGGGYSSGSSSYGSGGR ISSNVASKAAFGGSGG SSYGSGGRQSGSRGGS K A A G R Q 2 2 0 0 0 0 0 12 0 0 0 0 0 1 0 10 0 0 2 0 0 29 1 2500.0599 P35908;CON__P35908 P35908 516 544 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 5.6874E-30 85.925 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 44530000 710790 4773700 15168000 5176700 2319200 16381000 + 56 302 57 261;262;263;264;265;266 176;177;178;179;180;181 177 6 AAFGGSGGRGSSSGGGYSSGSSSYGSGGRQSGSR ISSNVASKAAFGGSGG GGRQSGSRGGSGGGGS K A A S R G 2 3 0 0 0 1 0 13 0 0 0 0 0 1 0 12 0 0 2 0 0 34 2 3015.3051 P35908;CON__P35908 P35908 516 549 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 4 0.00025464 29.822 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 37090000 983180 3067600 16826000 7822800 2287900 6101800 + 57 302 58 267;268;269;270;271;272 182;183 182 2 AAFGISDSYVDGSSFDPQRR EKKNERLRAAFGISDS SSFDPQRRAREAKQPA R A A R R A 2 2 0 3 0 1 0 2 0 1 0 0 0 2 1 4 0 0 1 1 0 20 1 2174.0029 Q9UQ35;Q9UQ35-2;I3L2L6;I3L182;Q9UQ39;I3L4D8;I3L1C0;I3L1I8;Q9UQ35-3 Q9UQ35 137 156 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 2.599E-40 112.96 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 73689000 0 48915000 0 0 24774000 0 58 1623 59 273;274 184;185 185 2 AAFTECCQAADK LFFAKRYKAAFTECCQ ECCQAADKAACLLPKL K A A D K A 4 0 0 1 2 1 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0 12 0 1370.5595 P02768;CON__P02768-1;E7ESU5;H0YA55;D6RHD5;B7WNR0 P02768 187 198 ALB Serum albumin yes no 2 0.011764 57.52 By matching By matching By MS/MS By matching By matching By matching 1 580790 0 0 580790 0 0 0 + 59 293 60 275 186 186 1 AAGEPIKEGDNDYFTCITK KHHPDKRKAAGEPIKE DYFTCITKAYEMLSDP K A A T K A 2 0 1 2 1 0 2 2 0 2 0 2 0 1 1 0 2 0 1 0 0 19 1 2127.9783 Q99543;Q99543-2;H7C3L7;C9IZ83;F5H621;F2Z3N9 Q99543 125 143 DNAJC2 DnaJ homolog subfamily C member 2 yes no 3 8.5079E-07 88.565 By matching By matching By matching By MS/MS By matching By matching 1 1 16023000 0 10462000 0 5560800 0 0 60 1426 61 276;277 187 187 1 AAGEVKALDDFYK ASRLSDTKAAGEVKAL KALDDFYKMLQHEPDR K A A Y K M 3 0 0 2 0 0 1 1 0 0 1 2 0 1 0 0 0 0 1 1 0 13 1 1425.714 Q9BRX2 Q9BRX2 271 283 PELO Protein pelota homolog yes yes 2;3 1.6483E-34 121.21 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 2 27845000 0 1899100 6975700 0 0 18971000 61 1443 62 278;279;280;281 188;189;190;191 188 3 AAGNPGSLAAPIDHKPCSAPLEPK PSCIKRQRAAGNPGSL CSAPLEPKSQASRNQR R A A P K S 5 0 1 1 1 0 1 2 1 1 2 2 0 0 5 2 0 0 0 0 0 24 1 2397.2111 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7 Q14676 1726 1749 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3;4 1.4859E-07 63.706 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 1 1 3 1 81227000 11783000 10785000 6981800 4765900 32184000 14727000 62 1109 63 282;283;284;285;286;287;288;289;290 192;193;194;195;196;197;198;199 197 7 AAGPASPPEEDPERTK SGGMEALKAAGPASPP EEDPERTKHRRKQKTP K A A T K H 3 1 0 1 0 0 3 1 0 0 0 1 0 0 4 1 1 0 0 0 0 16 1 1650.7849 Q96KM6 Q96KM6 404 419 ZNF512B Zinc finger protein 512B yes yes 3 0.0051539 49.988 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4840400 0 0 413060 0 1634400 2792900 63 1402 64 291;292;293 200;201 201 2 AAGPLLTDECR GVDGCIHRAAGPLLTD PLLTDECRTLQSCKTG R A A C R T 2 1 0 1 1 0 1 1 0 0 2 0 0 0 1 0 1 0 0 0 0 11 0 1201.5761 Q9BQ69 Q9BQ69 190 200 MACROD1 O-acetyl-ADP-ribose deacetylase MACROD1 yes yes 2 0.0093835 65.695 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 5310200 431320 1330200 566990 0 897570 2084100 64 1439 65 294;295;296;297;298 202 202 1 AAIVARHTYLANGQTK CSRIVVPKAAIVARHT YLANGQTKVLTQKLSS K A A T K V 4 1 1 0 0 1 0 1 1 1 1 1 0 0 0 0 2 0 1 1 0 16 1 1712.9322 F6RIS4;Q9H3M7 F6RIS4 158 173 TXNIP Thioredoxin-interacting protein yes no 3 6.1405E-05 88.108 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 5901300 0 493570 950650 1479600 2152000 825500 65 532 66 299;300;301;302;303 203;204 203 2 AALAHPFFQDVTKPVPHLRL PNKRISAKAALAHPFF KPVPHLRL________ K A A R L - 3 1 0 1 0 1 0 0 2 0 3 1 0 2 3 0 1 0 0 2 0 20 2 2256.2531 P24941-2;P24941;G3V5T9;E7ESI2 P24941-2 245 264 CDK2 Cyclin-dependent kinase 2 yes no 5 0.0011387 70.802 By matching By matching By matching By MS/MS By matching By matching 1 52861000 0 0 0 52861000 0 0 66 589 67 304 205 205 1 AALEAQNALHNMK FVTFYTRKAALEAQNA QNALHNMKVLPGMHHP K A A M K V 4 0 2 0 0 1 1 0 1 0 2 1 1 0 0 0 0 0 0 0 0 13 0 1409.7085 Q92879-2;Q92879-3;F8W940;Q92879;Q92879-4;G5EA30;E9PQK4;E9PSH0;E9PKU1 Q92879-2 71 83 CELF1 CUGBP Elav-like family member 1 yes no 2;3 7.6162E-15 104.17 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 1 1 1 7906600 2433700 3230300 583920 1658700 0 0 67 560 68 305;306;307;308;309;310 206;207;208 206 3 AALEEANGEIEK TTAMNRFKAALEEANG EANGEIEKFSNRSNIC K A A E K F 3 0 1 0 0 0 4 1 0 1 1 1 0 0 0 0 0 0 0 0 0 12 0 1272.6198 Q8NB16;Q8NB16-2;I3L4Z5;I3L2T9 Q8NB16 67 78 MLKL Mixed lineage kinase domain-like protein yes no 2 4.3881E-64 140.91 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 16262000 243740 4381500 1154600 387310 1506100 8588200 68 1314 69 311;312;313;314;315;316 209;210;211 209 3 AALEEFSR RVASAAAKAALEEFSR AALEEFSRVREEVPLE K A A S R V 2 1 0 0 0 0 2 0 0 0 1 0 0 1 0 1 0 0 0 0 0 8 0 921.4556 Q92922 Q92922 717 724 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 2 0.040645 68.016 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 15781000 1419200 2543300 1558300 1040900 3123300 6096000 69 1365 70 317;318;319;320;321;322 212 212 1 AALEEVYPDLTPEETRR FVDERRLRAALEEVYP LTPEETRRNSLGGDVL R A A R R N 2 2 0 1 0 0 4 0 0 0 2 0 0 0 2 0 2 0 1 1 0 17 1 1987.9851 Q9H0D6-2;B4DZC3;Q9H0D6 Q9H0D6-2 584 600 XRN2 5-3 exoribonuclease 2 yes no 3 0.0022598 48.214 By matching By MS/MS By matching By matching By matching By matching 1 9279800 0 9279800 0 0 0 0 70 146 71 323 213 213 1 AALGEPVRLER ________________ GEPVRLERDICRAIEL M A A E R D 2 2 0 0 0 0 2 1 0 0 2 0 0 0 1 0 0 0 0 1 0 11 1 1209.683 G3V1D4;Q9NUP9 G3V1D4 2 12 LIN7C Protein lin-7 homolog C yes no 2 0.0033269 72.2 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 71 575 72 324 214 214 1 AALGHLAGEAAAAPGPGTPCASR ________________ PGTPCASRGARLPGPV M A A S R G 8 1 0 0 1 0 1 4 1 0 2 0 0 0 3 1 1 0 0 0 0 23 0 2102.0327 Q9H7E9;Q9H7E9-2 Q9H7E9 2 24 C8orf33 UPF0488 protein C8orf33 yes no 3 0.0011971 63.706 By matching By matching By matching By MS/MS By matching By matching 1 36881000 0 0 0 36881000 0 0 72 1499 73 325 215 215 0 AALGHLAGEAAAAPGPGTPCASRGAR ________________ PCASRGARLPGPVSSA M A A A R L 9 2 0 0 1 0 1 5 1 0 2 0 0 0 3 1 1 0 0 0 0 26 1 2386.1924 Q9H7E9;Q9H7E9-2 Q9H7E9 2 27 C8orf33 UPF0488 protein C8orf33 yes no 3 1.1445E-11 72.568 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 54876000 32614000 0 22262000 0 0 0 73 1499 74 326;327 216;217 216 2 AALLSGPPGVGK KDDGSSFKAALLSGPP SGPPGVGKTTTASLVC K A A G K T 2 0 0 0 0 0 0 3 0 0 2 1 0 0 2 1 0 0 0 1 0 12 0 1065.6182 P35251-2;P35251 P35251-2 645 656 RFC1 Replication factor C subunit 1 yes no 2 0.03954 44.614 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 7017700 411150 2321300 2483600 1801700 0 0 74 896 75 328;329;330;331 218 218 1 AALMESQGQQQEER GNELERLRAALMESQG QGQQQEERGQQEREVA R A A E R G 2 1 0 0 0 4 3 1 0 0 1 0 1 0 0 1 0 0 0 0 0 14 0 1603.726 Q14980-2;Q14980 Q14980-2 986 999 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 0.010211 50.874 By matching By matching By matching By matching By matching By MS/MS 1 1 728830 0 0 0 0 260520 468310 75 1121 76 332;333 219 219 1 AALMESQGQQQEERGQQER GNELERLRAALMESQG EERGQQEREVARLTQE R A A E R E 2 2 0 0 0 6 4 2 0 0 1 0 1 0 0 1 0 0 0 0 0 19 1 2202.0084 Q14980-2;Q14980 Q14980-2 986 1004 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.024063 36.029 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 2571400 0 746310 203640 0 830380 791090 76 1121 77 334;335;336;337 220;221 220 2 AALNGADIYAGCCTLK VLCAQKAKAALNGADI YAGCCTLKIEYARPTR K A A L K I 4 0 1 1 2 0 0 2 0 1 2 1 0 0 0 0 1 0 1 0 0 16 0 1696.7913 Q8WVV9-4;C9J9G0;Q8WVV9;Q8WVV9-3;Q8WVV9-2;C9IYN3;H7BXH8 Q8WVV9-4 218 233 HNRNPLL;HNRPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 2 5.2222E-164 158.91 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 114990000 0 48412000 35032000 10317000 1907900 19325000 77 236 78 338;339;340;341;342 222;223;224;225 223 4 AALQMQFNAAER NPELGLSRAALQMQFN MQFNAAERETNGVHPS R A A E R E 4 1 1 0 0 2 1 0 0 0 1 0 1 1 0 0 0 0 0 0 0 12 0 1348.6558 Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-5;Q8WX93-2;Q8WX93-9 Q8WX93-3 215 226 PALLD Palladin yes no 2 0.0037769 67.879 By matching By MS/MS By matching By matching By matching By matching 1 726230 0 726230 0 0 0 0 78 1343 79 343 226 226 1 AAMYDIISSPSKDSTK DEKEQSEKAAMYDIIS SPSKDSTKLTLRLSRV K A A T K L 2 0 0 2 0 0 0 0 0 2 0 2 1 0 1 4 1 0 1 0 0 16 1 1712.8291 Q6KC79-2;Q6KC79;Q6KC79-3 Q6KC79-2 342 357 NIPBL Nipped-B-like protein yes no 3 0.0039447 52.372 By MS/MS By matching By matching By matching By matching By matching 1 1 4132400 3262800 0 0 869620 0 0 79 1222 80 344;345 227 227 1 AANAAENDFSVSQAEMSSR ERQVASLKAANAAEND SQAEMSSRQAMLENAS K A A S R Q 5 1 2 1 0 1 2 0 0 0 0 0 1 1 0 4 0 0 0 1 0 19 0 1983.8592 E9PC67;F8VQZ0;Q5STZ8;Q8NE71;Q8NE71-2;H0YGW7 Q8NE71 276 294 ABCF1 ATP-binding cassette sub-family F member 1 no no 2;3 1.7478E-145 147.64 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2 2 38125000 11127000 3151100 7799500 2114900 5587200 8345500 80 1321;411 81 346;347;348;349;350;351;352;353 228;229;230;231;232;233 228 6 AANENEPEGKVPSK TARKPVTRAANENEPE PEGKVPSKGRPAKNVE R A A S K G 2 0 2 0 0 0 3 1 0 0 0 2 0 0 2 1 0 0 0 1 0 14 1 1468.7158 A8MTM6;Q15398;Q15398-1 A8MTM6 232 245 DLGAP5 Disks large-associated protein 5 yes no 3 0.0065572 54.276 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1896900 0 0 453040 0 106380 1337400 81 42 82 354;355;356 234 234 1 AANLEMFKGK SRMEERLKAANLEMFK NLEMFKGKGIEERQQL K A A G K G 2 0 1 0 0 0 1 1 0 0 1 2 1 1 0 0 0 0 0 0 0 10 1 1107.5747 Q8WXI9 Q8WXI9 148 157 GATAD2B Transcriptional repressor p66-beta yes yes 2 0.016738 85.533 By matching By matching By matching By matching By matching By MS/MS 1 22783000 0 0 0 0 0 22783000 82 1344 83 357 235 235 1 AANLEMFKGKGIEER SRMEERLKAANLEMFK KGKGIEERQQLIKQLR K A A E R Q 2 1 1 0 0 0 3 2 0 1 1 2 1 1 0 0 0 0 0 0 0 15 2 1691.8665 Q8WXI9 Q8WXI9 148 162 GATAD2B Transcriptional repressor p66-beta yes yes 3;4 0.0070413 51.073 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 2 16148000 0 2062800 2665400 0 0 11420000 83 1344 84 358;359;360;361;362;363 236;237;238 238 3 AANSSGQGFQNKNR ________________ QGFQNKNRVAILAELD M A A N R V 2 1 3 0 0 2 0 2 0 0 0 1 0 1 0 2 0 0 0 0 0 14 1 1477.7022 Q9NRY2;Q9NRY2-2 Q9NRY2 2 15 INIP SOSS complex subunit C yes no 2 0.038311 41.227 By matching By matching By matching By matching By matching By MS/MS 1 1 1 773460 181780 0 0 0 178730 412950 84 1539 85 364;365;366 239 239 1 AAPAERQIDLQR KLQDLAKKAAPAERQI ERQIDLQR________ K A A Q R - 3 2 0 1 0 2 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 12 1 1366.7317 Q29RF7 Q29RF7 1326 1337 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 3 0.039529 44.847 By matching By MS/MS By matching By matching By matching By matching 1 1 6798900 0 2879400 3919400 0 0 0 85 1159 86 367;368 240 240 1 AAPAPATAASTTSSSSTSLSSSSK YGIKPETRAAPAPATA TSLSSSSKRTECSVAR R A A S K R 6 0 0 0 0 0 0 0 0 0 1 1 0 0 2 10 4 0 0 0 0 24 0 2154.0288 P28356 P28356 166 189 HOXD9 Homeobox protein Hox-D9 yes yes 2 0.0040675 42.384 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 6294400 0 1075800 1531100 759020 643610 2285000 86 884 87 369;370;371;372;373 241 241 1 AAPAPGKVGDVTPQVK TKESPARKAAPAPGKV GDVTPQVKGGALPPAK K A A V K G 3 0 0 1 0 1 0 2 0 0 0 2 0 0 3 0 1 0 0 3 0 16 1 1533.8515 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9 Q13428-3 238 253 TCOF1 Treacle protein no no 3 0.0019745 59.68 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 1 12103000 3423000 1120600 1121500 1800600 3337400 1300200 87 1082;383 88 374;375;376;377;378;379 242;243;244 244 3 AAPAPGKVGDVTPQVKGGALPPAK TKESPARKAAPAPGKV GGALPPAKRAKKPEEE K A A A K R 5 0 0 1 0 1 0 4 0 0 1 3 0 0 5 0 1 0 0 3 0 24 2 2225.2532 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9 Q13428-3 238 261 TCOF1 Treacle protein no no 4 0.003432 46.35 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 7135400 3831800 483120 1584000 1236400 0 0 88 1082;383 89 380;381;382;383 245 245 1 AAPAPTASSTININTSTSK DAAAAVAKAAPAPTAS NINTSTSKFLMNVITI K A A S K F 4 0 2 0 0 0 0 0 0 2 0 1 0 0 2 4 4 0 0 0 0 19 0 1830.9323 Q86Y37-2;Q86Y37 Q86Y37-2 103 121 CACUL1 CDK2-associated and cullin domain-containing protein 1 yes no 2 0.0017181 52.866 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2555800 0 723810 700460 0 0 1131500 89 1272 90 384;385;386 246;247 246 2 AAPEEHDSPTEASQPIVEEEETK ________________ IVEEEETKTFKDLGVT M A A T K T 3 0 0 1 0 1 7 0 1 1 0 1 0 0 3 2 2 0 0 1 0 23 0 2522.1296 Q9H0S4;G5E955;F5H1N9 Q9H0S4 2 24 DDX47 Probable ATP-dependent RNA helicase DDX47 yes no 2;3 9.3306E-22 93.196 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 2 1 2 2 2 141800000 42608000 12979000 53319000 0 19451000 13447000 90 1481 91 387;388;389;390;391;392;393;394;395 248;249;250;251;252;253 249 6 AAPEEHDSPTEASQPIVEEEETKTFK ________________ EEETKTFKDLGVTDVL M A A F K D 3 0 0 1 0 1 7 0 1 1 0 2 0 1 3 2 3 0 0 1 0 26 1 2898.3407 Q9H0S4;G5E955;F5H1N9 Q9H0S4 2 27 DDX47 Probable ATP-dependent RNA helicase DDX47 yes no 3 0 170.92 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 141170000 23237000 60043000 38599000 15415000 3876800 0 91 1481 92 396;397;398;399;400 254;255;256;257;258 255 5 AAPEEPQQRPPEAVAAAPAGTTSSR QEGGEAAKAAPEEPQQ PAGTTSSRVLRGGRDR K A A S R V 7 2 0 0 0 2 3 1 0 0 0 0 0 0 5 2 2 0 0 1 0 25 1 2488.2306 Q96JP5-2;H9KV86;Q96JP5 Q96JP5-2 24 48 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes no 3 0.0097527 35.812 By MS/MS By matching By matching By matching By MS/MS By MS/MS 2 1 1 1 1 1 38420000 8499300 529960 6641200 3562800 6456000 12731000 92 677 93 401;402;403;404;405;406;407 259;260;261 259 3 AAPGAEFAPNK GTPPAFNRAAPGAEFA GAEFAPNKRRRY____ R A A N K R 4 0 1 0 0 0 1 1 0 0 0 1 0 1 2 0 0 0 0 0 0 11 0 1071.5349 Q15233;F5GYZ3 Q15233 457 467 NONO Non-POU domain-containing octamer-binding protein yes no 2 0.0093835 65.695 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 16478000 0 2918500 1951000 1852300 3994200 5762200 93 1133 94 408;409;410;411;412 262;263 262 2 AAPGAEFAPNKR GTPPAFNRAAPGAEFA AEFAPNKRRRY_____ R A A K R R 4 1 1 0 0 0 1 1 0 0 0 1 0 1 2 0 0 0 0 0 0 12 1 1227.636 Q15233;F5GYZ3 Q15233 457 468 NONO Non-POU domain-containing octamer-binding protein yes no 2;3 0.00094017 81.625 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 1 2 2 23185000 7624800 3053100 2718100 5464200 4324600 0 94 1133 95 413;414;415;416;417;418;419;420 264;265;266;267;268;269;270 268 7 AAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHHFEQMLK QELVNQSKAAPQSPSV HHFEQMLKLSQRSKDE K A A L K L 3 0 2 1 0 2 3 2 2 0 3 3 2 1 7 5 0 0 0 2 0 38 2 4050.9932 E9PF10;O75694-2;B4DLT2;O75694 E9PF10 924 961 NUP155 Nuclear pore complex protein Nup155 yes no 5;6 2.9248E-07 35.368 By matching By matching By matching By MS/MS By matching By MS/MS 2 1 126930000 0 0 0 18996000 0 107930000 95 100 96 421;422;423 271;272;273 271 3 AAPSAGSWSTFQHK ________________ SWSTFQHKELMAADRG M A A H K E 3 0 0 0 0 1 0 1 1 0 0 1 0 1 1 3 1 1 0 0 0 14 0 1473.7001 E9PDN0;C9JRR9;P42575 E9PDN0 2 15 CASP2 Caspase-2;Caspase-2 subunit p18;Caspase-2 subunit p13;Caspase-2 subunit p12 yes no 2 0.00057747 71.879 By matching By matching By matching By matching By matching By MS/MS 1 1851900 0 0 0 0 0 1851900 96 267 97 424 274 274 1 AAQCGHPVLCVQPHHIGVAVK TDGERLVKAAQCGHPV HHIGVAVKELDLYLAY K A A V K E 3 0 0 0 2 2 0 2 3 1 1 1 0 0 2 0 0 0 0 4 0 21 0 2277.1623 P08651-4;P08651-5;P08651-3;P08651-2;P08651;F8W9H9 P08651-4 145 165 NFIC Nuclear factor 1 C-type yes no 3;4;5 9.5917E-06 69.289 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3 18031000 0 839810 909480 1268200 842860 14171000 97 563 98 425;426;427;428;429;430;431 275;276;277;278 277 3 AAQGEPQVQFK ________________ GEPQVQFKLVLVGDGG M A A F K L 2 0 0 0 0 3 1 1 0 0 0 1 0 1 1 0 0 0 0 1 0 11 0 1201.6091 P62826;B5MDF5 P62826 2 12 RAN GTP-binding nuclear protein Ran yes no 2 9.1825E-06 105.2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 2 1 26720000 0 4461200 3903000 5037500 0 13319000 98 173 99 432;433;434;435;436;437 279;280;281;282;283 283 4 AAQHGVCSVLK YFAALIRKAAQHGVCS HGVCSVLKGSEFMFEK K A A L K G 2 0 0 0 1 1 0 1 1 0 1 1 0 0 0 1 0 0 0 2 0 11 0 1168.6023 Q5JTH9-2;E9PCK7;Q5JTH9 Q5JTH9-2 155 165 RRP12 RRP12-like protein yes no 2 1.2937E-41 131.42 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2534900 0 549150 0 317260 0 1668500 99 414 100 438;439;440 284 284 1 AAQLAIRVTNPNAR NRKAIVERAAQLAIRV RVTNPNARLRSEE___ R A A A R L 4 2 2 0 0 1 0 0 0 1 1 0 0 0 1 0 1 0 0 1 0 14 1 1493.8427 D3YTB1;P62910;F8W727 D3YTB1 115 128 RPL32 60S ribosomal protein L32 yes no 3 0.0059448 55.291 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 8370900 1348500 0 0 1009700 1690400 4322300 100 312 101 441;442;443;444 285;286 285 2 AAQRLQDTSSYAK RKGFIDGRAAQRLQDT QDTSSYAKILTCPKTK R A A A K I 3 1 0 1 0 2 0 0 0 0 1 1 0 0 0 2 1 0 1 0 0 13 1 1437.7212 P15924;P15924-2 P15924 2760 2772 DSP Desmoplakin yes no 3 0.0010613 90.861 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 4892100 0 828140 983140 328660 760100 1992000 101 840 102 445;446;447;448;449 287 287 1 AAQSAPKVVLK ________________ SAPKVVLKSTTKMSLN M A A L K S 3 0 0 0 0 1 0 0 0 0 1 2 0 0 1 1 0 0 0 2 0 11 1 1110.6761 Q9Y3Y2-4;Q9Y3Y2;Q9Y3Y2-3 Q9Y3Y2-4 2 12 CHTOP Chromatin target of PRMT1 protein yes no 2 4.3866E-20 122.18 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 58553000 12881000 4907500 12543000 10845000 10413000 6964300 102 1649 103 450;451;452;453;454;455 288;289;290;291;292;293 288 6 AAQSAPKVVLKSTTK ________________ VVLKSTTKMSLNERFT M A A T K M 3 0 0 0 0 1 0 0 0 0 1 3 0 0 1 2 2 0 0 2 0 15 2 1527.8984 Q9Y3Y2-4;Q9Y3Y2;Q9Y3Y2-3 Q9Y3Y2-4 2 16 CHTOP Chromatin target of PRMT1 protein yes no 3 0.0041287 55.415 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 8666400 5163000 0 2102900 1400600 0 0 103 1649 104 456;457;458 294;295 294 2 AAQVAQDEEIAR LATQVDMRAAQVAQDE AQDEEIARLLMAEEKK R A A A R L 4 1 0 1 0 2 2 0 0 1 0 0 0 0 0 0 0 0 0 1 0 12 0 1299.6419 Q8IVM0;Q8IVM0-2 Q8IVM0 196 207 CCDC50 Coiled-coil domain-containing protein 50 yes no 2 0.0040099 66.393 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2979300 0 486920 0 0 792670 1699700 104 1277 105 459;460;461 296;297 296 2 AAQVERYVPEHER EAARKAIRAAQVERYV RYVPEHERCCWCLCCG R A A E R C 2 2 0 0 0 1 3 0 1 0 0 0 0 0 1 0 0 0 1 2 0 13 1 1582.7852 Q86UT8;E9PJ16;E9PPT8 Q86UT8 50 62 CCDC84 Coiled-coil domain-containing protein 84 yes no 3 0.0082324 57.567 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5732500 0 1348500 1111000 0 1501500 1771600 105 1263 106 462;463;464;465 298 298 1 AARPEIADRATSEVPGSQASPNPVPGDGLHR NDLEMGIKAARPEIAD VPGDGLHRAGFDAFMT K A A H R A 5 3 1 2 0 1 2 3 1 1 1 0 0 0 5 3 1 0 0 2 0 31 2 3151.5759 Q96GM8;B4DEM6 Q96GM8 409 439 TOE1 Target of EGR1 protein 1 yes no 5 0.026994 33.451 By matching By matching By MS/MS By matching By matching By matching 1 2484900 0 0 2484900 0 0 0 106 1389 107 466 299 299 1 AARRPYAPINANAIK RDLLQPRRAARRPYAP PINANAIKAECSIRLP R A A I K A 5 2 2 0 0 0 0 0 0 2 0 1 0 0 2 0 0 0 1 0 0 15 2 1624.9162 O94776;Q68DB1 O94776 478 492 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 3;4 0.0062139 53.947 By matching By matching By matching By matching By matching By MS/MS 2 2 2 27768000 0 3832600 4284600 0 0 19651000 107 754 108 467;468;469;470;471;472 300;301 300 2 AASAAAASAAAASAASGSPGPGEGSAGGEK ________________ EGSAGGEKRSTAPSAA M A A E K R 13 0 0 0 0 0 2 6 0 0 0 1 0 0 2 6 0 0 0 0 0 30 0 2386.0997 Q13263-2;Q13263 Q13263-2 2 31 TRIM28 Transcription intermediary factor 1-beta yes no 3 3.9061E-157 136.74 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 36139000 14102000 13703000 0 8333500 0 0 108 1076 109 473;474;475 302;303 303 2 AASAPAKGTPGKGATPAPPGK SEKILQVRAASAPAKG ATPAPPGKAGAVASQT R A A G K A 6 0 0 0 0 0 0 4 0 0 0 3 0 0 5 1 2 0 0 0 0 21 2 1830.9952 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 302 322 TCOF1 Treacle protein no no 3;4 3.1837E-45 110.64 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 3 2 109230000 24399000 13937000 12326000 13168000 33626000 11774000 109 1082;383 110 476;477;478;479;480;481;482;483;484;485;486;487;488;489;490 304;305;306;307;308;309;310;311;312;313 308 10 AASITSEVFNK GELNLMKKAASITSEV ITSEVFNKFFKERVME K A A N K F 2 0 1 0 0 0 1 0 0 1 0 1 0 1 0 2 1 0 0 1 0 11 0 1165.5979 Q9Y5B9;F5H063 Q9Y5B9 186 196 SUPT16H FACT complex subunit SPT16 yes no 2 0.0051197 73.632 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5352400 0 0 1737800 0 1877200 1737300 110 1653 111 491;492;493 314 314 1 AASLGSSQSSRTYAGGTASATK KKGSDEKKAASLGSSQ GGTASATKVSASSGAT K A A T K V 5 1 0 0 0 1 0 3 0 0 1 1 0 0 0 6 3 0 1 0 0 22 1 2057.9978 G5E9D3;P20810-5;E7ESM9;P20810-7;P20810-6;B7Z468;F8W7E0;H0YA91;E9PSG1;D6RGF7;D6RBR1;E7EN75;H0Y944 G5E9D3 49 70 CAST Calpastatin yes no 3 0.025198 34.148 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 3850000 571940 475920 618840 764660 610820 807780 111 375 112 494;495;496;497;498;499 315;316 315 2 AASQAVEEMR ________________ SQAVEEMRSRVVLGEF M A A M R S 3 1 0 0 0 1 2 0 0 0 0 0 1 0 0 1 0 0 0 1 0 10 0 1090.5077 O15160-2;O15160;E7EQB9 O15160-2 2 11 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes no 2 0.0032423 85.813 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2 1 14767000 1780200 1282200 1941400 835880 3492000 5434900 112 704 113 500;501;502;503;504;505;506 317;318;319;320;321 318 5 AASQDHVRGFLEK EEQKELQRAASQDHVR HVRGFLEKESAIVSRP R A A E K E 2 1 0 1 0 1 1 1 1 0 1 1 0 1 0 1 0 0 0 1 0 13 1 1456.7423 Q9Y314 Q9Y314 105 117 NOSIP Nitric oxide synthase-interacting protein yes yes 3 0.0022759 67.749 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 2 29305000 4335100 4532100 5040500 1516700 3292400 10588000 113 1642 114 507;508;509;510;511;512;513;514 322;323;324;325;326;327 322 6 AASTAAGKQRIPK ________________ AGKQRIPKVAKVKNKA M A A P K V 4 1 0 0 0 1 0 1 0 1 0 2 0 0 1 1 1 0 0 0 0 13 2 1297.7466 Q9BZJ0-2 Q9BZJ0-2 2 14 yes yes 3 0.0017483 74.237 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 11100000 1160600 3001300 1922000 0 1407800 3607900 114 1472 115 515;516;517;518;519 328;329 328 2 AASVPVKGSLGQGTAPVLPGK VGKGLQVKAASVPVKG TAPVLPGKTGPTVTQV K A A G K T 3 0 0 0 0 1 0 4 0 0 2 2 0 0 3 2 1 0 0 3 0 21 1 1933.0997 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 726 746 TCOF1 Treacle protein no no 3 2.0698E-45 108.25 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 2 1 2 2 236460000 136380000 25800000 31314000 20981000 21992000 0 115 1082;383 116 520;521;522;523;524;525;526;527 330;331;332;333;334;335;336 336 7 AATAATQGPKAQDKPYICTDCGK VPRRQPSRAATAATQG YICTDCGKRFVLSCSL R A A G K R 5 0 0 2 2 2 0 2 0 1 0 3 0 0 2 0 3 0 1 0 0 23 2 2451.1522 Q96MX3 Q96MX3 260 282 ZNF48 Zinc finger protein 48 yes yes 4 0.037182 30.311 By matching By matching By matching By matching By MS/MS By matching 1 1 1 3202900 809920 493580 0 0 1899400 0 116 1408 117 528;529;530 337 337 1 AATNHVTPEEKEQVYRER RERLKNIKAATNHVTP KEQVYRERQKYCKEWR K A A E R Q 2 2 1 0 0 1 4 0 1 0 0 1 0 0 1 0 2 0 1 2 0 18 2 2156.061 Q9P2W1;Q9P2W1-2 Q9P2W1 149 166 PSMC3IP Homologous-pairing protein 2 homolog yes no 4 0.024171 36.597 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 2773400 0 0 792680 578160 1155700 246860 117 1580 118 531;532;533;534 338 338 1 AATQGVVENQCQHIK CYVPSCLKAATQGVVE ENQCQHIKLAVNCQAE K A A I K L 2 0 1 0 1 3 1 1 1 1 0 1 0 0 0 0 1 0 0 2 0 15 0 1681.8206 Q9NWW7;C9JZF3;C9JJF4 Q9NWW7 123 137 C2orf42 Uncharacterized protein C2orf42 yes no 3 2.0517E-13 102.33 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 6605700 970990 949450 960110 676150 1613900 1435000 118 1557 119 535;536;537;538;539;540 339;340;341;342 342 4 AAVAASVGLSEGPAGSR ARRCRGMRAAVAASVG SEGPAGSRSGRLFRPP R A A S R S 5 1 0 0 0 0 1 3 0 0 1 0 0 0 1 3 0 0 0 2 0 17 0 1498.774 Q86U90 Q86U90 12 28 YRDC YrdC domain-containing protein, mitochondrial yes yes 2 0.0030265 62.813 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 4286100 725310 618640 0 0 1187200 1755000 119 1261 120 541;542;543;544 343 343 1 AAVAVVPLVSEDK LQEPPAKKAAVAVVPL VPLVSEDKSVTVPEAE K A A D K S 3 0 0 1 0 0 1 0 0 0 1 1 0 0 1 1 0 0 0 4 0 13 0 1296.7289 B4DLG2;O75152 B4DLG2 646 658 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 0.030658 44.426 By matching By matching By matching By matching By MS/MS By matching 1 5267800 0 0 0 0 5267800 0 120 97 121 545 344 344 1 AAVELEEPEDAR PNSVRLWKAAVELEEP LEEPEDARIMLSRAVE K A A A R I 3 1 0 1 0 0 4 0 0 0 1 0 0 0 1 0 0 0 0 1 0 12 0 1327.6256 O94906-2;O94906 O94906-2 409 420 PRPF6 Pre-mRNA-processing factor 6 yes no 2 0.028955 47.991 By matching By matching By matching By matching By MS/MS By matching 1 1 1 3038300 0 724630 0 0 990380 1323300 121 757 122 546;547;548 345 345 1 AAVGEEKDINTFVGTPVEK GKAMHTPKAAVGEEKD FVGTPVEKLDLLGNLP K A A E K L 2 0 1 1 0 0 3 2 0 1 0 2 0 1 1 0 2 0 0 3 0 19 1 2003.0211 P46013;F5H4V4;P46013-2 P46013 1909 1927 MKI67 Antigen KI-67 no no 3 0.00048413 77.031 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 23096000 16265000 0 6830400 0 0 0 122 919;920 123 549;550 346;347 346 2 AAVKEPLEFHAK ________________ EPLEFHAKRPWRPEEA M A A A K R 3 0 0 0 0 0 2 0 1 0 1 2 0 1 1 0 0 0 0 1 0 12 1 1338.7296 Q03701;F5H3Y6 Q03701 2 13 CEBPZ CCAAT/enhancer-binding protein zeta yes no 2;3 8.6706E-18 118.61 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 2 1 1 1 46090000 8119400 12333000 5615700 2719400 0 17302000 123 1037 124 551;552;553;554;555;556 348;349;350;351 349 4 AAVKGSDGFWVGK KTVNNLLKAAVKGSDG SDGFWVGKSSLRSWRQ K A A G K S 2 0 0 1 0 0 0 3 0 0 0 2 0 1 0 1 0 1 0 2 0 13 1 1320.6826 Q86UV5;Q86UV5-2;B7ZKS7;Q86UV5-3 Q86UV5 584 596 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes no 3 0.0059096 60.161 By matching By matching By matching By matching By MS/MS By matching 1 1 1 4879900 0 521720 0 0 1680000 2678200 124 1264 125 557;558;559 352 352 1 AAWGALEK VTSANLSKAAWGALEK AAWGALEKNGTQLMIR K A A E K N 3 0 0 0 0 0 1 1 0 0 1 1 0 0 0 0 0 1 0 0 0 8 0 844.4443 G3V2F4;E7EPD8;Q9NUW8;H0YJ44;Q86TV8 G3V2F4 520 527 TDP1 Tyrosyl-DNA phosphodiesterase 1 yes no 2 0.0063921 95.815 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 8659300 631440 499950 1201200 543910 1613600 4169100 125 357 126 560;561;562;563;564;565 353 353 1 AAYEAELGDARK SREVSGIKAAYEAELG AELGDARKTLDSVAKE K A A R K T 4 1 0 1 0 0 2 1 0 0 1 1 0 0 0 0 0 0 1 0 0 12 1 1292.6361 P02545;P02545-3;Q6UYC3;P02545-2;Q3BDU5;Q5TCJ4 P02545 79 90 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.00071527 91.313 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 11859000 1042900 2846900 1413300 926650 0 5629200 126 783 127 566;567;568;569;570 354;355;356;357;358 357 5 AAYLSDPRAPPCEYK NTMSQEEKAAYLSDPR RAPPCEYKDWLTKMSG K A A Y K D 3 1 0 1 1 0 1 0 0 0 1 1 0 0 3 1 0 0 2 0 0 15 1 1736.8192 P78527 P78527 3826 3840 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2;3 5.6788E-05 89.26 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 2 3 189000000 4269200 41047000 24743000 25183000 42181000 51580000 127 1012 128 571;572;573;574;575;576;577;578;579;580;581;582;583;584 359;360;361;362;363;364;365;366;367;368;369 363 11 ACARPLISVYSEK ________________ LISVYSEKGESSGKNV M A C E K G 2 1 0 0 1 0 1 0 0 1 1 1 0 0 1 2 0 0 1 1 0 13 1 1492.7708 E7EWF1;P36578;H3BU31;B4DP82;H3BTP7 E7EWF1 2 14 RPL4 60S ribosomal protein L4 yes no 2 2.2749E-09 105.19 By matching By MS/MS By matching By matching By matching By matching 1 12039000 0 12039000 0 0 0 0 128 392 129 585 370;371 370 2 ACARPLISVYSEKGESSGK ________________ EKGESSGKNVTLPAVF M A C G K N 2 1 0 0 1 0 2 2 0 1 1 2 0 0 1 4 0 0 1 1 0 19 2 2038.0153 E7EWF1;P36578;H3BU31;B4DP82;H3BTP7 E7EWF1 2 20 RPL4 60S ribosomal protein L4 yes no 3 6.4164E-172 154.39 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 2 1 1 16344000 6395800 1241300 0 658540 0 8048400 129 392 130 586;587;588;589;590 372;373;374;375 373 3 ACCPLEGVRPSPQQTEYRNK EQRHKHNKACCPLEGV QQTEYRNKCEFLVGVG K A C N K C 1 2 1 0 2 2 2 1 0 0 1 1 0 0 3 1 1 0 1 1 0 20 2 2389.1267 Q8IZ69-2;Q8IZ69;F2Z2W7 Q8IZ69-2 223 242 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A yes no 4 0.031595 33.666 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 15694000 1424200 3990100 3932500 0 2623100 3723600 130 478 131 591;592;593;594;595 376 376 1 ACEIRDQITSK YLKQYKEKACEIRDQI IRDQITSKEAQLTSSK K A C S K E 1 1 0 1 1 1 1 0 0 2 0 1 0 0 0 1 1 0 0 0 0 11 1 1319.6503 Q92878-2;Q92878;Q92878-3;E7EN38;E7ESD9 Q92878-2 226 236 RAD50 DNA repair protein RAD50 yes no 2;3 2.9051E-07 107.34 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 2 2 36523000 4023200 3121200 2735900 1694600 8278100 16670000 131 1362 132 596;597;598;599;600;601;602;603;604 377;378;379;380;381;382;383 377 7 ACGPKLTNSPTVIVMVGLPARGK ________________ VGLPARGKTYISKKLT K A C G K T 2 1 1 0 1 0 0 3 0 1 2 2 1 0 3 1 2 0 0 3 0 23 2 2365.2974 F5H5L1;Q5VX15 F5H5L1 6 28 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes no 4 0.0016467 50.916 By matching By matching By MS/MS By matching By matching By matching 1 17938000 0 0 17938000 0 0 0 132 519 133 605 384 384 1 ACGVSRPVIACSVTIK RSKQALGRACGVSRPV IACSVTIKEGSQLKQQ R A C I K E 2 1 0 0 2 0 0 1 0 2 0 1 0 0 1 2 1 0 0 3 0 16 1 1716.9015 P55769;B1AHD1 P55769 92 107 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 3 0.00024781 71.316 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 28971000 8512800 4348700 4898100 2553700 1749500 6908600 133 969 134 606;607;608;609;610;611 385;386;387;388;389 389 5 ACGVSRPVIACSVTIKEGSQLK RSKQALGRACGVSRPV IKEGSQLKQQIQSIQQ R A C L K Q 2 1 0 0 2 1 1 2 0 2 1 2 0 0 1 3 1 0 0 3 0 22 2 2359.2352 P55769;B1AHD1 P55769 92 113 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 3;4 3.9053E-06 78.057 By MS/MS By matching By matching By matching By matching By matching 2 11266000 11266000 0 0 0 0 0 134 969 135 612;613 390;391 390 1 ACLDRNPEAFKPK NERQKAIKACLDRNPE NPEAFKPKIGKGKEGE K A C P K I 2 1 1 1 1 0 1 0 0 0 1 2 0 1 2 0 0 0 0 0 0 13 2 1544.7769 Q6MZP7-3;Q6MZP7;Q6MZP7-4;Q6MZP7-2 Q6MZP7-3 349 361 LIN54 Protein lin-54 homolog yes no 3 9.4646E-09 103.91 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 11467000 0 1343500 1432500 2120100 3376000 3194800 135 1223 136 614;615;616;617;618 392;393 393 2 ACLNFLK LYTEERPRACLNFLKL RACLNFLKLCKIKYYN R A C L K L 1 0 1 0 1 0 0 0 0 0 2 1 0 1 0 0 0 0 0 0 0 7 0 864.45276 Q8WUA2 Q8WUA2 24 30 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 2 0.0013153 113.08 By matching By matching By matching By matching By matching By MS/MS 1 1 1799900 0 386590 0 0 0 1413300 136 1339 137 619;620 394 394 1 ACPLQPDHTNDEKE GLGKAKRKACPLQPDH DHTNDEKE________ K A C K E - 1 0 1 2 1 1 2 0 1 0 1 1 0 0 2 0 1 0 0 0 0 14 1 1652.71 Q15004;H0YKX3 Q15004 98 111 KIAA0101 PCNA-associated factor yes no 2;3 0.016684 58.32 By matching By matching By MS/MS By matching By matching By MS/MS 2 2 2 1 2 25059000 0 4880500 6310700 1481700 1944300 10442000 137 1124 138 621;622;623;624;625;626;627;628;629 395;396;397 396 2 ACQLSVVVDDK PLHVFAPRACQLSVVV LSVVVDDKKFVSNITR R A C D K K 1 0 0 2 1 1 0 0 0 0 1 1 0 0 0 1 0 0 0 3 0 11 0 1232.6071 F5GX68 F5GX68 1338 1348 DNMT1 Cytosine-specific methyltransferase no no 2 0.0081578 67.519 By matching By MS/MS By matching By matching By matching By matching 1 1 3024400 0 2029300 0 0 995160 0 138 487 139 630;631 398 398 1 ACQSIYPLHDVFVRK SIGKDIEKACQSIYPL LHDVFVRKVKMLKKPK K A C R K V 1 1 0 1 1 1 0 0 1 1 1 1 0 1 1 1 0 0 1 2 0 15 1 1831.9403 D6RAT0;P61247;D6RG13;D6R9B6;D6RB09;H0Y9Y4 D6RAT0 163 177 RPS3A 40S ribosomal protein S3a yes no 3;4 0.0004366 77.204 By matching By matching By matching By MS/MS By MS/MS By matching 2 1 26184000 0 0 0 22764000 3420500 0 139 321 140 632;633;634 399;400;401 399 2 ACQSIYPLHDVFVRKVK SIGKDIEKACQSIYPL DVFVRKVKMLKKPKFE K A C V K M 1 1 0 1 1 1 0 0 1 1 1 2 0 1 1 1 0 0 1 3 0 17 2 2059.1037 D6RAT0;P61247;D6RG13;D6R9B6;D6RB09;H0Y9Y4 D6RAT0 163 179 RPS3A 40S ribosomal protein S3a yes no 4;5 0.00069403 80.507 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 2 1 53592000 16993000 0 0 32160000 4438200 0 140 321 141 635;636;637;638 402;403;404;405 402 4 ACSVGAVPGITK INSLKRSRACSVGAVP GAVPGITKFMQEVYLD R A C T K F 2 0 0 0 1 0 0 2 0 1 0 1 0 0 1 1 1 0 0 2 0 12 0 1158.6067 Q9NVN8 Q9NVN8 277 288 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 2 0.0033562 70.563 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 6260800 0 1331600 1098500 0 0 3830700 141 1549 142 639;640;641 406;407 406 2 ACVQGECGVCHYCR RVRCRKCKACVQGECG CGVCHYCRDMKKFGGP K A C C R D 1 1 0 0 4 1 1 2 1 0 0 0 0 0 0 0 0 0 1 2 0 14 0 1754.6745 E7EMR1;D4QA03;E9PIL6;Q9Y2K7-3;Q9Y2K7-2;Q9Y2K7 E7EMR1 137 150 KDM2A Lysine-specific demethylase 2A yes no 3 0.00092181 77.644 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 10158000 1359000 1085600 827510 1353200 1842200 3690600 142 314 143 642;643;644;645;646;647 408;409;410;411 411 4 ADAAATAGAGGSGTR ________________ GAGGSGTRSGSKQSTN M A D T R S 6 1 0 1 0 0 0 4 0 0 0 0 0 0 0 1 2 0 0 0 0 15 0 1232.5745 C9J7M8;Q7Z7C8;Q7Z7C8-2;Q7Z7C8-4 C9J7M8 2 16 TAF8 Transcription initiation factor TFIID subunit 8 yes no 2 9.5122E-05 87.363 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 3787600 861220 887020 516040 632810 890530 0 143 233 144 648;649;650;651;652 412;413;414;415;416 415 5 ADAAATAGAGGSGTRSGSK ________________ SGTRSGSKQSTNPADN M A D S K Q 6 1 0 1 0 0 0 5 0 0 0 1 0 0 0 3 2 0 0 0 0 19 1 1591.755 C9J7M8;Q7Z7C8;Q7Z7C8-2;Q7Z7C8-4 C9J7M8 2 20 TAF8 Transcription initiation factor TFIID subunit 8 yes no 2 4.5691E-65 121.01 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 13606000 0 2591000 2535700 1816600 3510800 3152300 144 233 145 653;654;655;656;657 417;418;419;420;421 419 5 ADAEAECNILRK RGLYTTAKADAEAECN AECNILRKALDKIAEI K A D R K A 3 1 1 1 1 0 2 0 0 1 1 1 0 0 0 0 0 0 0 0 0 12 1 1388.6718 Q96ES7 Q96ES7 68 79 CCDC101 SAGA-associated factor 29 homolog yes yes 3 0.022183 43.604 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 2744800 0 399490 0 287220 927550 1130600 145 1383 146 658;659;660;661 422 422 1 ADCPENATMSLKHLTK HIPPLNRKADCPENAT MSLKHLTKKLLNRDIQ K A D T K K 2 0 1 1 1 0 1 0 1 0 2 2 1 0 1 1 2 0 0 0 0 16 1 1814.8655 Q9H9L3 Q9H9L3 293 308 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 yes yes 3 0.014796 42.818 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 7365500 1876200 1157200 1955600 507760 1868800 0 146 1509 147 662;663;664;665;666 423 423 1 ADDPYAHLSK EEEGGESKADDPYAHL DPYAHLSKKEKKKLKK K A D S K K 2 0 0 2 0 0 0 0 1 0 1 1 0 0 1 1 0 0 1 0 0 10 0 1115.5247 E9PC67;F8VQZ0;Q5STZ8;Q8NE71 Q8NE71 246 255 ABCF1 ATP-binding cassette sub-family F member 1 no no 2 0.0030558 92.611 By matching By matching By MS/MS By matching By matching By matching 1 1268200 0 0 1268200 0 0 0 147 1321;411 148 667 424 424 1 ADEGISFR AQDYGVLKADEGISFR ADEGISFRGLFIIDDK K A D F R G 1 1 0 1 0 0 1 1 0 1 0 0 0 1 0 1 0 0 0 0 0 8 0 893.4243 Q06830 Q06830 121 128 PRDX1 Peroxiredoxin-1 yes yes 2 0.013633 89.698 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 30425000 0 0 3534400 1457600 5969300 19463000 148 1044 149 668;669;670;671 425 425 1 ADEVVAPGQEK RMYHTKEKADEVVAPG VVAPGQEKISSLSGAH K A D E K I 2 0 0 1 0 1 2 1 0 0 0 1 0 0 1 0 0 0 0 2 0 11 0 1141.5615 Q8IY37 Q8IY37 132 142 DHX37 Probable ATP-dependent RNA helicase DHX37 yes yes 2 0.0060017 70.728 By matching By MS/MS By MS/MS By matching By matching By matching 2 1 1 1 4993000 0 2041500 1635200 0 383700 932510 149 1288 150 672;673;674;675;676 426;427 426 2 ADFDDRVSDEEK ________________ DRVSDEEKVRIAAKFI M A D E K V 1 1 0 4 0 0 2 0 0 0 0 1 0 1 0 1 0 0 0 1 0 12 1 1424.6056 P52907 P52907 2 13 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 2 0.00053199 94.547 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 3624600 1461500 2163200 0 0 0 0 150 961 151 677;678;679 428;429;430 429 3 ADFDDRVSDEEKVR ________________ VSDEEKVRIAAKFITH M A D V R I 1 2 0 4 0 0 2 0 0 0 0 1 0 1 0 1 0 0 0 2 0 14 2 1679.7751 P52907 P52907 2 15 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 3 0.0020634 66.023 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2988100 0 1382800 0 685900 0 919380 151 961 152 680;681;682 431;432 431 2 ADFSGMSQTDLSLSK TDAFELGKADFSGMSQ QTDLSLSKVVHKSFVE K A D S K V 1 0 0 2 0 1 0 1 0 0 2 1 1 1 0 4 1 0 0 0 0 15 0 1585.7294 H0Y3G3;E9PD07;P35237 H0Y3G3 105 119 SERPINB6 Serpin B6 yes no 2 4.4413E-05 88.951 By matching By MS/MS By matching By matching By matching By matching 1 10063000 0 10063000 0 0 0 0 152 418 153 683 433 433 1 ADIQTER ________________ MADIQTERAYQKQPTI M A D E R A 1 1 0 1 0 1 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 7 0 831.40865 P62280 P62280 2 8 RPS11 40S ribosomal protein S11 yes yes 2 0.021192 79.116 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2253600 595310 509670 729440 0 0 419200 153 989 154 684;685;686;687 434;435 435 2 ADIQTERAYQKQPTIFQNK ________________ QPTIFQNKKRVLLGET M A D N K K 2 1 1 1 0 4 1 0 0 2 0 2 0 1 1 0 2 0 1 0 0 19 2 2278.1706 P62280 P62280 2 20 RPS11 40S ribosomal protein S11 yes yes 3 1.1537E-100 135.69 By matching By matching By matching By MS/MS By matching By matching 1 1 7456300 0 3315000 0 4141200 0 0 154 989 155 688;689 436;437 437 2 ADKEAAFDDAVEER ________________ FDDAVEERVINEEYKI M A D E R V 4 1 0 3 0 0 3 0 0 0 0 1 0 1 0 0 0 0 0 1 0 14 1 1564.7005 Q09028-3;Q09028;E9PNS2;E9PIC4;E9PNS6 Q09028-3 2 15 RBBP4 Histone-binding protein RBBP4 yes no 2 9.3292E-124 149.6 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 37075000 4118800 0 32956000 0 0 0 155 1051 156 690;691 438;439 438 2 ADLDVSGPK DVDVNLPKADLDVSGP DLDVSGPKVDIDVPDV K A D P K V 1 0 0 2 0 0 0 1 0 0 1 1 0 0 1 1 0 0 0 1 0 9 0 900.45526 Q09666 Q09666 3049 3057 AHNAK Neuroblast differentiation-associated protein AHNAK yes no 2 0.00050793 110.76 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 7981600 0 2608500 1737500 0 0 3635600 156 1054 157 692;693;694 440;441;442;443 442 4 ADLHGAIISVTK MIQAKLLKADLHGAII GAIISVTKSKCPSYVG K A D T K S 2 0 0 1 0 0 0 1 1 2 1 1 0 0 0 1 1 0 0 1 0 12 0 1223.6874 O95707;A8MYC1 O95707 133 144 POP4 Ribonuclease P protein subunit p29 yes no 3 0.0089914 58.32 By matching By matching By matching By matching By matching By MS/MS 1 1217300 0 0 0 0 0 1217300 157 773 158 695 444 444 1 ADLIPYQDSPEGPDHSSASSGVPNPPKAR ERRFPIYKADLIPYQD VPNPPKARTYTETVNH K A D A R T 3 1 1 3 0 1 1 2 1 1 1 1 0 0 6 5 0 0 1 1 0 29 1 2988.4213 Q8WUA4;H7C318;H7C3X9;H0Y4Q6 Q8WUA4 757 785 GTF3C2 General transcription factor 3C polypeptide 2 yes no 4 0.00012162 45.042 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 47734000 0 3193200 13518000 0 11789000 19235000 158 1340 159 696;697;698;699 445;446;447;448 445 4 ADPAFGLESSGIAGTTSDEPERIEESGNDEAR EAAKVTGKADPAFGLE ESGNDEARVEGQATDE K A D A R V 4 2 1 3 0 0 6 4 0 2 1 0 0 1 2 4 2 0 0 0 0 32 1 3306.476 Q8TAQ2-2;F8VTJ5;Q8TAQ2;F8VXC8 Q8TAQ2-2 760 791 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 3 8.4479E-33 80.664 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 28540000 0 18553000 0 9987100 0 0 159 539 160 700;701 449;450 449 2 ADPATPGRVHYHPDSPAK SSWLVAGKADPATPGR YHPDSPAKGAQWMKQI K A D A K G 3 1 0 2 0 0 0 1 2 0 0 1 0 0 4 1 1 0 1 1 0 18 1 1914.9337 O43435-2;O43435;O43435-3 O43435-2 185 202 TBX1 T-box transcription factor TBX1 yes no 4 0.0018893 65.511 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 10787000 911550 1342200 2271800 0 2291800 3969900 160 716 161 702;703;704;705;706 451 451 1 ADPDGPEAQAEACSGER ________________ AEACSGERTYQELLVN K A D E R T 4 1 0 2 1 1 3 2 0 0 0 0 0 0 2 1 0 0 0 0 0 17 0 1758.7115 D6RC52;D6RCB9;Q9NX24 D6RC52 6 22 NHP2 H/ACA ribonucleoprotein complex subunit 2 yes no 2 0.0037868 49.708 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 5186600 1236000 861630 0 0 1657000 1432000 161 323 162 707;708;709;710 452;453;454;455 455 4 ADPENIKSEGDGTQDIVDK ETEQNKKKADPENIKS GTQDIVDKSSEKLVRG K A D D K S 1 0 1 4 0 1 2 2 0 2 0 2 0 0 1 1 1 0 0 1 0 19 1 2029.944 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1506 1524 RIF1 Telomere-associated protein RIF1 yes no 3 0.039807 33.666 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 6220200 0 1414700 1125100 576740 1593600 1510100 162 1201 163 711;712;713;714;715 456 456 1 ADPQGPELGEACEKGNMLK IISERIQKADPQGPEL CEKGNMLKRQRIKREK K A D L K R 2 0 1 1 1 1 3 3 0 0 2 2 1 0 2 0 0 0 0 0 0 19 1 2042.9401 P13682 P13682 145 163 ZNF35 Zinc finger protein 35 yes yes 3 0.0030588 49.708 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 2 1 16298000 3221800 2971700 2702100 1691200 2703600 3007300 163 835 164 716;717;718;719;720;721;722 457;458 457 2 ADQDRLDLEER EKFNRDQKADQDRLDL DRLDLEERKKVETEAK K A D E R K 1 2 0 3 0 1 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 11 1 1358.6426 Q14683;G8JLG1 Q14683 402 412 SMC1A Structural maintenance of chromosomes protein 1A yes no 3 0.012843 61.815 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2574900 419940 1048300 0 0 0 1106700 164 1110 165 723;724;725 459 459 1 ADQGDGPEGSGRACSTVEGK DSCLQLAKADQGDGPE ACSTVEGKWQQRLKNP K A D G K W 2 1 0 2 1 1 2 5 0 0 0 1 0 0 1 2 1 0 0 1 0 20 1 1976.8494 Q96RL1;F8VQY2;Q96RL1-3;F2Z2T8;Q96RL1-2;Q96RL1-4;H7BXP9 Q96RL1 588 607 UIMC1 BRCA1-A complex subunit RAP80 yes no 3 0.00081998 55.688 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 18535000 0 2639800 1990100 1150400 3173000 9581800 165 535 166 726;727;728;729;730 460;461;462 461 3 ADSEPESPLNASYVYK SKLSNPQKADSEPESP LNASYVYKEHPFILNL K A D Y K E 2 0 1 1 0 0 2 0 0 0 1 1 0 0 2 3 0 0 2 1 0 16 0 1768.8156 B7Z5N6;Q5T1V6-2;Q5T1V6 B7Z5N6 154 169 DDX59 Probable ATP-dependent RNA helicase DDX59 yes no 2 0.033164 38.14 By matching By MS/MS By matching By matching By matching By matching 1 1066900 0 1066900 0 0 0 0 166 190 167 731 463 463 1 ADSLLAVVK TAHAQSSKADSLLAVV DSLLAVVKREPAEQPG K A D V K R 2 0 0 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 0 2 0 9 0 914.54368 Q14151;A8MXT5;C9JPX0;Q15424;F5H1L1;F5H0H3;F5GZU3;B7Z2F6 Q14151 285 293 SAFB2;SAFB Scaffold attachment factor B2;Scaffold attachment factor B1 no no 2 3.4616E-69 149.82 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 554000000 51046000 59583000 64009000 37188000 41338000 300830000 167 1097;1137 168 732;733;734;735;736;737;738 464;465;466;467;468;469;470 469 7 ADSRDPASDQMQHWK ________________ SDQMQHWKEQRAAQKA M A D W K E 2 1 0 3 0 2 0 0 1 0 0 1 1 0 1 2 0 1 0 0 0 15 1 1770.7744 P04040 P04040 2 16 CAT Catalase yes yes 3 0.00027259 91.789 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 4144900 0 810440 1752800 1345200 236540 0 168 785 169 739;740;741;742 471 471 1 ADTEEEFLAFRK QPKRSLRKADTEEEFL EEFLAFRKQTPSAGKA K A D R K Q 2 1 0 1 0 0 3 0 0 0 1 1 0 2 0 0 1 0 0 0 0 12 1 1454.7042 P46013;F5H4V4;P46013-2 P46013 1762 1773 MKI67 Antigen KI-67 no no 2;3 0 267.02 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 3 1 555600000 119040000 111880000 70961000 49808000 53175000 150730000 169 919;920 170 743;744;745;746;747;748;749;750;751;752;753;754 472;473;474;475;476;477;478;479;480;481;482 480 10 ADTEEEFLAFRKQTPSAGK QPKRSLRKADTEEEFL KQTPSAGKAMHTPKPA K A D G K A 3 1 0 1 0 1 3 1 0 0 1 2 0 2 1 1 2 0 0 0 0 19 2 2124.0487 P46013;F5H4V4;P46013-2 P46013 1762 1780 MKI67 Antigen KI-67 no no 3;4 0.00085837 80.508 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 2 1 328780000 72113000 31626000 131520000 9708100 31773000 52043000 170 919;920 171 755;756;757;758;759;760;761;762;763 483;484;485;486;487;488;489;490 489 8 ADTTSTVTPVPGQEK AKEVTIAKADTTSTVT TPVPGQEKGSALEGRA K A D E K G 1 0 0 1 0 1 1 1 0 0 0 1 0 0 2 1 4 0 0 2 0 15 0 1529.7573 Q9H9B1-3;Q9H9B1;Q9H9B1-4;C9JD67;Q9H9B1-2 Q9H9B1-3 645 659 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes no 2 0.0016325 68.283 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 19696000 804620 2838800 2594000 2292200 5440800 5725500 171 1507 172 764;765;766;767;768;769 491;492;493 491 3 ADTTTGSKPTGVFSR DRLGAETKADTTTGSK KPTGVFSRLGATPETD K A D S R L 1 1 0 1 0 0 0 2 0 0 0 1 0 1 1 2 4 0 0 1 0 15 1 1523.758 Q8N9M1-3;Q8N9M1-2;Q8N9M1 Q8N9M1-3 110 124 C19orf47 Uncharacterized protein C19orf47 yes no 3 0.01736 43.914 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 5607800 1034200 0 1694800 543570 0 2335200 172 1310 173 770;771;772;773 494 494 1 ADVEEEFLAFRK RPKRSLKKADVEEEFL EEFLAFRKLTPSAGKA K A D R K L 2 1 0 1 0 0 3 0 0 0 1 1 0 2 0 0 0 0 0 1 0 12 1 1452.7249 P46013;F5H4V4;P46013-2 P46013 1884 1895 MKI67 Antigen KI-67 no no 3 1.4841E-07 103.21 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 298560000 5984200 0 257580000 28128000 6471900 387760 173 919;920 174 774;775;776;777;778 495;496;497;498;499 498 5 ADVEEEFLALRK WPKRSLRKADVEEEFL EEFLALRKLTPSAGKA K A D R K L 2 1 0 1 0 0 3 0 0 0 2 1 0 1 0 0 0 0 0 1 0 12 1 1418.7405 P46013;F5H4V4;P46013-2 P46013 1154 1165 MKI67 Antigen KI-67 no no 2;3 6.3422E-166 169.21 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 2 1 3 808280000 28909000 700860000 0 67316000 0 11192000 174 919;920 175 779;780;781;782;783;784;785;786;787 500;501;502;503;504;505;506 504 5 ADVEEESLALR QSKRSLRKADVEEESL EEESLALRKRTPSVGK K A D L R K 2 1 0 1 0 0 3 0 0 0 2 0 0 0 0 1 0 0 0 1 0 11 0 1230.6092 P46013;F5H4V4;P46013-2 P46013 2246 2256 MKI67 Antigen KI-67 no no 2 0.011767 62.799 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 4477100 713920 710640 1219800 0 295630 1537100 175 919;920 176 788;789;790;791;792 507;508;509 508 3 ADVEEESLALRK QSKRSLRKADVEEESL EESLALRKRTPSVGKA K A D R K R 2 1 0 1 0 0 3 0 0 0 2 1 0 0 0 1 0 0 0 1 0 12 1 1358.7042 P46013;F5H4V4;P46013-2 P46013 2246 2257 MKI67 Antigen KI-67 no no 2;3 0 242.97 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 3 2 545820000 80088000 77918000 106070000 42851000 99833000 139060000 176 919;920 177 793;794;795;796;797;798;799;800;801;802;803;804;805;806 510;511;512;513;514;515;516;517;518;519;520;521;522 513 12 ADVEGELLACR RPKRSIRKADVEGELL EGELLACRNLMPSAGK K A D C R N 2 1 0 1 1 0 2 1 0 0 2 0 0 0 0 0 0 0 0 1 0 11 0 1231.5867 P46013;F5H4V4;P46013-2 P46013 1276 1286 MKI67 Antigen KI-67 no no 2 1.088E-49 136.96 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 62291000 0 9149100 0 2764900 0 50377000 177 919;920 178 807;808;809;810;811 523;524;525;526;527;528 524 6 ADVEGELLACRNLMPSAGK RPKRSIRKADVEGELL NLMPSAGKAMHTPKPS K A D G K A 3 1 1 1 1 0 2 2 0 0 3 1 1 0 1 1 0 0 0 1 0 19 1 2029.9925 P46013;F5H4V4;P46013-2 P46013 1276 1294 MKI67 Antigen KI-67 no no 3 8.6255E-38 108.25 By matching By MS/MS By matching By matching By matching By matching 1 144550000 0 144550000 0 0 0 0 178 919;920 179 812 529 529 1 ADVERYIASVQGSTPSPR ________________ QGSTPSPRQKSMKGFY K A D P R Q 2 2 0 1 0 1 1 1 0 1 0 0 0 0 2 3 1 0 1 2 0 18 1 1931.9701 P49792;E9PGT0;F8WBP7 P49792 6 23 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 3 7.6075E-182 155.92 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 43085000 0 8982400 14265000 14963000 4874200 0 179 945 180 813;814;815;816 530;531;532 532 3 ADVERYIASVQGSTPSPRQK ________________ STPSPRQKSMKGFYFA K A D Q K S 2 2 0 1 0 2 1 1 0 1 0 1 0 0 2 3 1 0 1 2 0 20 2 2188.1236 P49792;E9PGT0;F8WBP7 P49792 6 25 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 3;4 7.1544E-230 166.21 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 1 1 66077000 34541000 2073500 18316000 4687100 1833500 4626100 180 945 181 817;818;819;820;821;822;823;824;825 533;534;535;536;537;538;539;540;541 539 8 ADVLSGENAYMCAK RALELFVKADVLSGEN ENAYMCAKCKKKVPAS K A D A K C 3 0 1 1 1 0 1 1 0 0 1 1 1 0 0 1 0 0 1 1 0 14 0 1527.6698 Q9P275;Q9P275-2;F5H3B9 Q9P275 291 304 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 5.8517E-05 91.845 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 21787000 6122800 0 4872000 1194500 2259400 7338200 181 1576 182 826;827;828;829;830 542;543;544;545 545 4 ADVTRLPATIAR EELLSDMKADVTRLPA RLPATIARIPPVAVRL K A D A R I 3 2 0 1 0 0 0 0 0 1 1 0 0 0 1 0 2 0 0 1 0 12 1 1282.7357 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1840 1851 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.00011302 98.368 By matching By matching By matching By matching By matching By MS/MS 1 1 1 9410700 0 1116500 998000 0 0 7296200 182 486 183 831;832;833 546 546 1 ADVTRLPATLSR EELLSDMKADVTRLPA RLPATLSRIPPIAARL K A D S R I 2 2 0 1 0 0 0 0 0 0 2 0 0 0 1 1 2 0 0 1 0 12 1 1298.7306 Q12873;E9PG89;Q12873-2 Q12873 1877 1888 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 3 0.011936 57.567 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3506800 0 664790 229180 0 0 2612800 183 430 184 834;835;836 547 547 1 ADVVDSETVVR YETGPCSKADVVDSET VDSETVVRARGLPWQS K A D V R A 1 1 0 2 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 4 0 11 0 1188.5986 Q9H6T0-2;Q9H6T0 Q9H6T0-2 240 250 ESRP2 Epithelial splicing regulatory protein 2 yes no 2 0.010802 63.944 By matching By matching By matching By matching By MS/MS By matching 1 1 1 8309500 1012200 3388000 0 0 3909300 0 184 1498 185 837;838;839 548 548 1 ADVVDSETVVRAR YETGPCSKADVVDSET SETVVRARGLPWQSSD K A D A R G 2 2 0 2 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 4 0 13 1 1415.7369 Q9H6T0-2;Q9H6T0 Q9H6T0-2 240 252 ESRP2 Epithelial splicing regulatory protein 2 yes no 3 5.7185E-35 123.67 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 31827000 2591400 6089900 8360600 3541800 5020400 6222800 185 1498 186 840;841;842;843;844;845 549;550;551 550 3 AEAAALSTQCR TLHKSLVRAEAAALST AALSTQCREASGLSAD R A E C R E 4 1 0 0 1 1 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 11 0 1176.5557 Q9H6T0-2;Q9H6T0 Q9H6T0-2 77 87 ESRP2 Epithelial splicing regulatory protein 2 yes no 2 0.0038421 80.245 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3196400 0 725610 393860 0 718030 1358900 186 1498 187 846;847;848;849 552 552 1 AEAALEEESR AYINAKSRAEAALEEE AALEEESRQRQSRMEK R A E S R Q 3 1 0 0 0 0 4 0 0 0 1 0 0 0 0 1 0 0 0 0 0 10 0 1103.5095 C0IMW5;B4DFR4;Q969G3-2;B4DGM3;Q969G3 C0IMW5 114 123 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes no 2 0.034866 55.353 By matching By matching By MS/MS By matching By matching By matching 1 264950 0 0 264950 0 0 0 187 85 188 850 553 553 1 AEAAVVAVAEK APRGRKRKAEAAVVAV AVVAVAEKREKLANGG K A E E K R 5 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 3 0 11 0 1056.5815 Q8IZQ5 Q8IZQ5 10 20 SELH Selenoprotein H yes yes 2 0.0054001 72.29 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 6189800 1856700 0 0 1356400 2112400 864340 188 1293 189 851;852;853;854 554;555;556 556 3 AEAEALYQTK EEIAQRSKAEAEALYQ AEALYQTKVQQLQISV K A E T K V 3 0 0 0 0 1 2 0 0 0 1 1 0 0 0 0 1 0 1 0 0 10 0 1122.5557 Q86Y46;CON__Q32MB2;H0YIC5;B4DQ49;Q86Y46-2;Q8N1N4-2;Q8N1N4;CON__Q8N1N4-2;CON__Q7RTT2;Q3SY84;CON__Q3SY84;Q7RTS7;CON__Q7RTS7;F8W1S1;F8VS64;P19013;CON__P19013;F5H8K9 F8VS64 324 333 KRT73;KRT78;KRT71;KRT74;KRT4 Keratin, type II cytoskeletal 73;Keratin, type II cytoskeletal 78;Keratin, type II cytoskeletal 71;Keratin, type II cytoskeletal 74;Keratin, type II cytoskeletal 4 no no 2 1.9966E-05 111.27 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 13766000 0 0 6739600 326990 640030 6058900 + 189 300;305 190 855;856;857;858 557;558 557 2 AEAESLYQSK EDIAQKSKAEAESLYQ AESLYQSKYEELQITA K A E S K Y 2 0 0 0 0 1 2 0 0 0 1 1 0 0 0 2 0 0 1 0 0 10 0 1124.535 P04264;CON__P04264 P04264 367 376 KRT1 Keratin, type II cytoskeletal 1 yes no 2 4.8592E-15 120.06 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 540030000 13687000 90670000 284070000 46490000 44356000 60750000 + 190 789 191 859;860;861;862;863;864 559;560;561;562;563;564;565 559 7 AEASSANLGSGCEEK ________________ LGSGCEEKRHEGSSSE M A E E K R 3 0 1 0 1 0 3 2 0 0 1 1 0 0 0 3 0 0 0 0 0 15 0 1508.6413 Q6P1K2-3;Q5TCK1;Q6P1K2;Q6P1K2-2;Q6P1K2-5 Q6P1K2-3 2 16 PMF1 Polyamine-modulated factor 1 yes no 2 5.4008E-06 92.38 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 12686000 3394500 0 1663300 0 5457100 2171100 191 1197 192 865;866;867;868;869 566;567;568;569;570 570 5 AEAVVNTVDISER RLEQTRKKAEAVVNTV NTVDISEREKVAQLRS K A E E R E 2 1 1 1 0 0 2 0 0 1 0 0 0 0 0 1 1 0 0 3 0 13 0 1401.71 Q8IY81 Q8IY81 764 776 FTSJ3 pre-rRNA processing protein FTSJ3 yes yes 2 0.0022324 67.234 By MS/MS By matching By matching By matching By matching By matching 1 450310 450310 0 0 0 0 0 192 1289 193 870 571 571 1 AECRYCGCAISR LAPMDSLKAECRYCGC YCGCAISRGKKGDVGT K A E S R G 2 2 0 0 3 0 1 1 0 1 0 0 0 0 0 1 0 0 1 0 0 12 1 1501.6224 O75132 O75132 475 486 ZBED4 Zinc finger BED domain-containing protein 4 yes yes 3 0.022874 50.897 By matching By matching By matching By matching By matching By MS/MS 1 1 986080 0 251340 0 0 0 734740 193 737 194 871;872 572 572 1 AECSIRLPK PINANAIKAECSIRLP ECSIRLPKAAKTPLKI K A E P K A 1 1 0 0 1 0 1 0 0 1 1 1 0 0 1 1 0 0 0 0 0 9 1 1072.5699 O94776;Q68DB1 O94776 493 501 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 2 2.8924E-29 135.43 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 75565000 0 14164000 22107000 0 841110 38453000 194 754 195 873;874;875;876 573;574;575 573 3 AECTARLPEASQSPLVLK PINSAAIKAECTARLP SQSPLVLKQAVRKPLE K A E L K Q 3 1 0 0 1 1 2 0 0 0 3 1 0 0 2 2 1 0 0 1 0 18 1 1969.0303 Q13330;Q13330-3;E7ESY4;E7EN71;H0Y4T7;F8W9Y9 Q13330 510 527 MTA1 Metastasis-associated protein MTA1 yes no 3 7.5604E-210 161.75 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 46165000 0 12989000 0 0 0 33176000 195 1078 196 877;878 576;577 576 2 AEDAVEAIRGLDNTEFQGK YAFVHMERAEDAVEAI DNTEFQGKRMHVQLST R A E G K R 3 1 1 2 0 1 3 2 0 1 1 1 0 1 0 0 1 0 0 1 0 19 1 2061.9967 Q9BWF3;E9PB51;Q9BQ04;E7EQS3 Q9BWF3 121 139 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 3 1.4034E-33 94.639 By matching By MS/MS By matching By matching By matching By matching 1 123200000 0 123200000 0 0 0 0 196 1457 197 879 578 578 0 AEDEPDAKSPK ________________ EPDAKSPKTGGRAPPG M A E P K T 2 0 0 2 0 0 2 0 0 0 0 2 0 0 2 1 0 0 0 0 0 11 1 1185.5513 F8W689;P48382;B7Z848;F6TYI9;F6X9D6;F6R6G4;F6UE82;F6U6P3;F8WDU3;F8WFE4;F2Z2G0;F6S3S0;F6X8N2 F8W689 2 12 RFX5 DNA-binding protein RFX5 yes no 2 0.0075759 81.709 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1931900 0 0 872440 0 394900 664510 197 553 198 880;881;882 579;580 579 1 AEDEWKAQVAR TKVQDHSKAEDEWKAQ EWKAQVARGRQEAERK K A E A R G 3 1 0 1 0 1 2 0 0 0 0 1 0 0 0 0 0 1 0 1 0 11 1 1301.6364 Q14980-2;Q14980;F5H2L0;H0YFY6 Q14980-2 1205 1215 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2;3 7.3152E-20 119.22 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 22711000 2067900 2823200 4556100 3898300 4691500 4674500 198 1121 199 883;884;885;886;887;888;889;890;891;892;893 581;582;583;584;585;586;587;588;589 584 9 AEEDAALQAK SELGRKRKAEEDAALQ EDAALQAKKTRVSDPI K A E A K K 4 0 0 1 0 1 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 10 0 1044.5088 Q13428-7;E7ETY2;Q13428-6;Q13428-5;H0YA99;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 65 74 TCOF1 Treacle protein no no 2 0.0022251 102.06 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 6437500 1242200 1392500 2075100 458210 724810 544590 199 1082;383 200 894;895;896;897;898;899 590;591;592;593 592 4 AEEDTQFNYHRK KRKKEMVKAEEDTQFN TQFNYHRKKNIAAERK K A E R K K 1 1 1 1 0 1 2 0 1 0 0 1 0 1 0 0 1 0 1 0 0 12 1 1536.6957 Q14683;H0Y7K8;E7EPI6 Q14683 178 189 SMC1A Structural maintenance of chromosomes protein 1A yes no 3 0.0016989 80.706 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 14049000 0 2001200 2208200 1769700 2381000 5689300 200 1110 201 900;901;902;903;904;905 594;595;596;597;598 594 4 AEEGIAAGGVMDVNTALQEVLK ________________ TALQEVLKTALIHDGL M A E L K T 4 0 1 1 0 1 3 3 0 1 2 1 1 0 0 0 1 0 0 3 0 22 0 2214.1202 P25398 P25398 2 23 RPS12 40S ribosomal protein S12 yes yes 2 4.0087E-06 62.082 By MS/MS By matching By matching By matching By matching By matching 1 32718000 32718000 0 0 0 0 0 201 875 202 906 599 599 1 AEEHQRQNINKFER ASPPGTVKAEEHQRQN QNINKFERRQARPPDA K A E E R R 1 2 2 0 0 2 3 0 1 1 0 1 0 1 0 0 0 0 0 0 0 14 2 1797.887 B7ZM82;B3KVH1;O95785;O95785-2 B7ZM82 838 851 WIZ Protein Wiz yes no 4 0.021129 43.761 By matching By matching By matching By matching By MS/MS By matching 1 1 1107400 0 0 0 0 500270 607150 202 212 203 907;908 600 600 1 AEEIVAAQEK TPLKDEERAEEIVAAQ EIVAAQEKSFHHVTHD R A E E K S 3 0 0 0 0 1 3 0 0 1 0 1 0 0 0 0 0 0 0 1 0 10 0 1086.5557 H0Y4W2;Q9Y4A5-2;F2Z2U4;Q9Y4A5 H0Y4W2 942 951 TRRAP Transformation/transcription domain-associated protein yes no 2 0.01037 73.499 By matching By matching By MS/MS By matching By matching By matching 1 547460 0 0 547460 0 0 0 203 476 204 909 601 601 1 AEELGQELK ELTSQAERAEELGQEL EELGQELKAWQEKFFQ R A E L K A 1 0 0 0 0 1 3 1 0 0 2 1 0 0 0 0 0 0 0 0 0 9 0 1015.5186 Q14980-2;Q14980;F5H2L0;H0YFY6 Q14980-2 1322 1330 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 0.011126 83.647 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 12720000 1081300 2275000 1539300 0 2169000 5655500 204 1121 205 910;911;912;913;914 602;603;604 603 3 AEEPSDLIGPEAPK NPWKDRTKAEEPSDLI LIGPEAPKTLTSQDDK K A E P K T 2 0 0 1 0 0 3 1 0 1 1 1 0 0 3 1 0 0 0 0 0 14 0 1451.7144 Q8N5F7 Q8N5F7 284 297 NKAP NF-kappa-B-activating protein yes yes 2 0.0014162 69.456 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2793200 0 1161400 0 0 0 1631800 205 1303 206 915;916 605;606 605 2 AEEVATFFAK KVMKLSPKAEEVATFF EVATFFAKMLDHEYTT K A E A K M 3 0 0 0 0 0 2 0 0 0 0 1 0 2 0 0 1 0 0 1 0 10 0 1111.555 P11387 P11387 253 262 TOP1 DNA topoisomerase 1 yes yes 2 1.1378E-23 126.39 By matching By MS/MS By matching By matching By matching By matching 1 9081200 0 9081200 0 0 0 0 206 825 207 917 607;608 607 2 AEEYTEETEER SQSSHSYKAEEYTEET YTEETEEREESTTGFD K A E E R E 1 1 0 0 0 0 6 0 0 0 0 0 0 0 0 0 2 0 1 0 0 11 0 1384.563 Q9Y2W1 Q9Y2W1 792 802 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 4.4886E-13 117.09 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 10043000 493420 1501800 2097500 1082100 2037000 2830900 207 1639 208 918;919;920;921;922;923;924 609;610;611;612;613;614;615 612 7 AEFCNKSKQPGLAR KDRMNVEKAEFCNKSK SKQPGLARSQHNRWAG K A E A R S 2 1 1 0 1 1 1 1 0 0 1 2 0 1 1 1 0 0 0 0 0 14 2 1604.8093 E9PFZ0;P38398-4;P38398-2;P38398;E9PFC7;E7EP70;F8W8H7;E7EMP0;E9PH68;E7EWN5;Q3B891;C9IZW4;H0Y8D8 E9PFZ0 255 268 BRCA1 Breast cancer type 1 susceptibility protein yes no 4 0.025344 41.825 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 9064300 1671700 1428700 0 1419400 2519100 2025300 208 426 209 925;926;927;928;929 616 616 1 AEFEEQNVRK SKTHTKRKAEFEEQNV FEEQNVRKKQRPLTAS K A E R K K 1 1 1 0 0 1 3 0 0 0 0 1 0 1 0 0 0 0 0 1 0 10 1 1248.6099 Q9UFW8;C9JUJ0 Q9UFW8 72 81 CGGBP1 CGG triplet repeat-binding protein 1 yes no 3 0.0043835 82.645 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 3201900 0 643680 921880 349170 413760 873440 209 1588 210 930;931;932;933;934 617;618 618 2 AEFVEVTK RLSQKFPKAEFVEVTK AEFVEVTKLVTDLTKV K A E T K L 1 0 0 0 0 0 2 0 0 0 0 1 0 1 0 0 1 0 0 2 0 8 0 921.48075 CON__P02769 CON__P02769 249 256 yes yes 1;2 3.0224E-167 180.87 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 1045400000 133370000 136090000 86222000 59505000 211570000 418640000 + 210 294 211 935;936;937;938;939;940;941 619;620;621;622;623;624;625 623 7 AEGDSAGTAGTPGGTPAGDK SNTFSPSKAEGDSAGT GGTPAGDKVASWELRV K A E D K V 4 0 0 2 0 0 1 6 0 0 0 1 0 0 2 1 3 0 0 0 0 20 0 1715.7598 Q92925-3;B9EGA3;Q92925-2;Q92925 Q92925-3 159 178 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 yes no 2 0.0073794 43.164 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 3581800 0 503030 0 0 839790 2238900 211 217 212 942;943;944 626;627;628 626 3 AEGFVDALHR QSAPVGMKAEGFVDAL GFVDALHRVRQIAAKI K A E H R V 2 1 0 1 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 1 0 10 0 1113.5567 Q96I24;A6NJ37 Q96I24 16 25 FUBP3 Far upstream element-binding protein 3 yes no 2 0.018011 65.278 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 3946800 0 630270 513030 0 1136800 1666700 212 1394 213 945;946;947;948 629;630 629 2 AEGFVDALHRVR QSAPVGMKAEGFVDAL VDALHRVRQIAAKIDS K A E V R Q 2 2 0 1 0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 2 0 12 1 1368.7262 Q96I24;A6NJ37 Q96I24 16 27 FUBP3 Far upstream element-binding protein 3 yes no 2;3 0.0018183 84.31 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 3 2 105700000 0 9645100 20510000 5057800 22059000 48426000 213 1394 214 949;950;951;952;953;954;955;956 631;632;633;634;635;636;637;638;639;640 637 10 AEGGGGGGRPGAPAAGDGK QQAGGKKKAEGGGGGG APAAGDGKTEQKGGDK K A E G K T 4 1 0 1 0 0 1 9 0 0 0 1 0 0 2 0 0 0 0 0 0 19 1 1537.7233 Q00839;B3KX72 Q00839 216 234 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 3 0.011796 40.602 By matching By MS/MS By matching By matching By matching By matching 1 1 1 793090 0 419700 0 142660 0 230730 214 1022 215 957;958;959 641 641 1 AEGPGRGDEPSPS QQKMCWLKAEGPGRGD RGDEPSPS________ K A E P S - 1 1 0 1 0 0 2 3 0 0 0 0 0 0 3 2 0 0 0 0 0 13 1 1254.5477 G3V1I6;H0Y2W2;Q9NVI7-2;E9PDY1;Q9NVI7 G3V1I6 495 507 ATAD3A ATPase family AAA domain-containing protein 3A yes no 2 0.0057854 69.03 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 4659800 438060 659670 861910 488910 957700 1253500 215 576 216 960;961;962;963;964;965 642;643 643 2 AEGTVFTEEDFQK VAKTKKKKAEGTVFTE FTEEDFQKFQQEYFGS K A E Q K F 1 0 0 1 0 1 3 1 0 0 0 1 0 2 0 0 2 0 0 1 0 13 0 1499.678 Q86WX3 Q86WX3 116 128 RPS19BP1 Active regulator of SIRT1 yes yes 2 0.028651 45.115 By matching By matching By matching By MS/MS By matching By matching 1 355230 0 0 0 355230 0 0 216 1269 217 966 644 644 1 AEHLESPQLGGK QRASLNPRAEHLESPQ ESPQLGGKVSFPETPK R A E G K V 1 0 0 0 0 1 2 2 1 0 2 1 0 0 1 1 0 0 0 0 0 12 0 1264.6412 Q9NYD6;D6RAG4 Q9NYD6 184 195 HOXC10 Homeobox protein Hox-C10 yes no 2;3 0.00018861 95.477 By matching By matching By matching By matching By MS/MS By MS/MS 1 2 1 2 2 9118100 649530 2214900 267620 0 2175600 3810400 217 1562 218 967;968;969;970;971;972;973;974 645;646;647 645 3 AEKPDATADAEPDANQK SEEANEPKAEKPDATA AEPDANQKAEAAPESQ K A E Q K A 5 0 1 3 0 1 2 0 0 0 0 2 0 0 2 0 1 0 0 0 0 17 1 1769.8068 Q96T58 Q96T58 1774 1790 SPEN Msx2-interacting protein yes yes 3 0.0074263 45.438 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1684000 0 0 0 485740 428900 769360 218 1422 219 975;976;977 648;649 648 2 AEKQVETEEAGVVTTATASVNLK ARRGRKRKAEKQVETE ATASVNLKVSPKRGRP K A E L K V 4 0 1 0 0 1 4 1 0 0 1 2 0 0 0 1 4 0 0 4 0 23 1 2374.2227 O75475;O75475-2 O75475 153 175 PSIP1 PC4 and SFRS1-interacting protein yes no 3 0 191.73 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 112940000 0 16482000 0 24757000 0 71696000 219 741 220 978;979;980 650;651;652 650 3 AELDDTPMR RALAEIAKAELDDTPM ELDDTPMRGRQLRVRF K A E M R G 1 1 0 2 0 0 1 0 0 0 1 0 1 0 1 0 1 0 0 0 0 9 0 1046.4703 P23246;P23246-2 P23246 350 358 SFPQ Splicing factor, proline- and glutamine-rich yes no 2 0.036082 61.78 By matching By matching By matching By matching By matching By MS/MS 1 683080 0 0 0 0 0 683080 220 865 221 981 653 653 1 AELEIANPPELQK LPTKASSKAELEIANP ANPPELQKHLEHAPSP K A E Q K H 2 0 1 0 0 1 3 0 0 1 2 1 0 0 2 0 0 0 0 0 0 13 0 1450.7668 Q9Y4C1;F5H4E6;F5H070;F8WE62 Q9Y4C1 426 438 KDM3A Lysine-specific demethylase 3A yes no 2 0.015732 68.044 By matching By matching By MS/MS By matching By matching By matching 1 7768300 0 0 7768300 0 0 0 221 516 222 982 654 654 0 AELIKTHHNDTELIRK ASLVASGKAELIKTHH NDTELIRKLREEGKVI K A E R K L 1 1 1 1 0 0 2 0 2 2 2 2 0 0 0 0 2 0 0 0 0 16 2 1917.0432 F8W720;B4DUT7;P49915 F8W720 286 301 GMPS GMP synthase [glutamine-hydrolyzing] yes no 4 0.011618 43.69 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 3692900 1043000 0 1192600 983850 473450 0 222 129 223 983;984;985;986 655;656 655 2 AELLLLK KKRGRKSKAELLLLKL KAELLLLKLSKDLDRP K A E L K L 1 0 0 0 0 0 1 0 0 0 4 1 0 0 0 0 0 0 0 0 0 7 0 798.52149 Q8WUA4;Q8WUA4-2 Q8WUA4 149 155 GTF3C2 General transcription factor 3C polypeptide 2 yes no 2 4.7708E-07 119.56 By matching By matching By matching By matching By MS/MS By matching 1 59855000 0 0 0 0 59855000 0 223 1340 224 987 657 657 1 AELNSTTEELHK KAKLQQCKAELNSTTE STTEELHKYQKMLEPP K A E H K Y 1 0 1 0 0 0 3 0 1 0 2 1 0 0 0 1 2 0 0 0 0 12 0 1370.6678 O95235;B4DL79 O95235 701 712 KIF20A Kinesin-like protein KIF20A yes no 3 0.013812 53.567 By matching By MS/MS By matching By matching By matching By matching 2 2168000 0 2168000 0 0 0 0 224 767 225 988;989 658;659 659 2 AELNSTTEELHKYQK KAKLQQCKAELNSTTE EELHKYQKMLEPPPSA K A E Q K M 1 0 1 0 0 1 3 0 1 0 2 2 0 0 0 1 2 0 1 0 0 15 1 1789.8846 O95235;B4DL79 O95235 701 715 KIF20A Kinesin-like protein KIF20A yes no 3 1.6944E-05 90.689 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 22980000 2355800 2990100 4889200 2597800 3625700 6521400 225 767 226 990;991;992;993;994;995 660;661;662;663;664 662 5 AELQTALAHTQHAAR IGILVSEKAELQTALA AHTQHAARQKEGESED K A E A R Q 5 1 0 0 0 2 1 0 2 0 2 0 0 0 0 0 2 0 0 0 0 15 0 1616.8383 H0Y7B8;B7ZC06;Q08379 H0Y7B8 164 178 GOLGA2 Golgin subfamily A member 2 yes no 4 0.0067578 48.351 By matching By matching By matching By matching By matching By MS/MS 1 1 3176400 227830 0 0 0 0 2948500 226 204 227 996;997 665 665 1 AELVQGQSAPVGMK ________________ QSAPVGMKAEGFVDAL M A E M K A 2 0 0 0 0 2 1 2 0 0 1 1 1 0 1 1 0 0 0 2 0 14 0 1413.7286 Q96I24 Q96I24 2 15 FUBP3 Far upstream element-binding protein 3 yes yes 2 3.9297E-20 107.46 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 3 1 1 1 158620000 0 56227000 54371000 29224000 18800000 0 227 1394 228;229 998;999;1000;1001;1002;1003;1004 666;667;668;669;670;671 668 162 6 AELYKEPTNEELNRLR LQPVKLSRAELYKEPT NEELNRLRETEILFHS R A E L R E 1 2 2 0 0 0 4 0 0 0 3 1 0 0 1 0 1 0 1 0 0 16 2 1974.0171 Q9H6R4-4;Q9H6R4;Q9H6R4-2;G8JLK7;Q9H6R4-3 Q9H6R4-4 58 73 NOL6 Nucleolar protein 6 yes no 3 0.033481 44.968 By matching By MS/MS By matching By matching By matching By matching 1 1 4327400 0 2172000 0 0 2155400 0 228 1497 230 1005;1006 672 672 1 AENAGLSSTAGLLR EDKVKTLKAENAGLSS SSTAGLLREQVAQLKQ K A E L R E 3 1 1 0 0 0 1 2 0 0 3 0 0 0 0 2 1 0 0 0 0 14 0 1358.7154 P17275 P17275 305 318 JUNB Transcription factor jun-B yes yes 2 0.016499 57.788 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 16695000 0 6773800 0 1081100 0 8840400 229 848 231 1007;1008;1009 673;674 674 1 AENKYAGGNPVCVRPTPK STSVSSRKAENKYAGG VCVRPTPKWQKGIGEF K A E P K W 2 1 2 0 1 0 1 2 0 0 0 2 0 0 3 0 1 0 1 2 0 18 2 1956.984 Q15004;H0YMA4;H0YKX3 Q15004 43 60 KIAA0101 PCNA-associated factor yes no 3;4 0.00078461 69.081 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 1 2 21295000 446920 4966500 4793200 2472800 1919000 6696800 230 1124 232 1010;1011;1012;1013;1014;1015;1016;1017;1018;1019 675;676;677;678;679;680 680 5 AENTTGNWLTAK NEAKEEIKAENTTGNW TGNWLTAKSGRKKRCP K A E A K S 2 0 2 0 0 0 1 1 0 0 1 1 0 0 0 0 3 1 0 0 0 12 0 1304.6361 Q9NYD6 Q9NYD6 255 266 HOXC10 Homeobox protein Hox-C10 yes yes 2 1.406E-07 105.19 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 1 1 2 1 21228000 1378400 3771100 2593600 1968700 3188500 8327900 231 1562 233 1020;1021;1022;1023;1024;1025;1026;1027 681;682;683;684 682 4 AENVVEPGPPSAKRPK ________________ PPSAKRPKLSSPALSA M A E P K L 2 1 1 0 0 0 2 1 0 0 0 2 0 0 4 1 0 0 0 2 0 16 2 1674.9053 Q09472 Q09472 2 17 EP300 Histone acetyltransferase p300 yes yes 3 0.012684 44.132 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 4386400 0 1089000 727900 578660 965500 1025300 232 1053 234 1028;1029;1030;1031;1032 685 685 1 AEPASVAAESLAGSRAR ________________ SLAGSRARAARTVLGQ M A E A R A 6 2 0 0 0 0 2 1 0 0 1 0 0 0 1 3 0 0 0 1 0 17 1 1641.8434 Q9NQT5-2;Q9NQT5 Q9NQT5-2 2 18 EXOSC3 Exosome complex component RRP40 yes no 2 0 197.73 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 105740000 16718000 20514000 43210000 21523000 3770000 0 233 1532 235 1033;1034;1035;1036;1037 686;687;688;689 687 4 AEPEALQSLRR PATPKRRKAEPEALQS EALQSLRRSTRHSANC K A E R R S 2 2 0 0 0 1 2 0 0 0 2 0 0 0 1 1 0 0 0 0 0 11 1 1268.6837 A6NCU2;B7Z227;A6NHW8;Q8N5Y2-2;Q8N5Y2-3;Q8N5Y2;A6NLU8 A6NCU2 174 184 MSL3 Male-specific lethal 3 homolog yes no 3 0.0013212 86.898 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 12763000 1385000 1799900 1479900 828820 2040900 5228300 234 15 236 1038;1039;1040;1041;1042;1043 690;691;692;693 692 4 AEPPQAMNALMR KIQKKEEKAEPPQAMN QAMNALMRLNQLKPGL K A E M R L 3 1 1 0 0 1 1 0 0 0 1 0 2 0 2 0 0 0 0 0 0 12 0 1327.6377 Q12906-5;Q12906-4;Q12906-2;Q12906-6;Q12906-3;C9JFV5;Q12906;G5E9M5;B4DFG4 Q12906-5 397 408 ILF3 Interleukin enhancer-binding factor 3 yes no 2 1.5899E-05 89.9 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 14431000 7162000 7269300 0 0 0 0 235 243 237 1044;1045;1046 694;695;696 694 3 AEPSEVDMNSPKSK KAKQVKKKAEPSEVDM DMNSPKSKKAKKKEEP K A E S K K 1 0 1 1 0 0 2 0 0 0 0 2 1 0 2 3 0 0 0 1 0 14 1 1517.7032 Q9NR30;Q3SWU7 Q9NR30 62 75 DDX21 Nucleolar RNA helicase 2 yes no 3 0.0018185 67.234 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 2 2 1 1 1 6301300 2035600 1123100 0 680910 1767200 694650 236 1534 238 1047;1048;1049;1050;1051;1052;1053 697;698;699;700;701 700 5 AEPTAAPHPVLK GTAPAQAKAEPTAAPH AAPHPVLKQVIKPRRK K A E L K Q 3 0 0 0 0 0 1 0 1 0 1 1 0 0 3 0 1 0 0 1 0 12 0 1229.6768 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7;F5H7D9;H7C3H1 Q86YP4 488 499 GATAD2A Transcriptional repressor p66-alpha yes no 2;3 0.0017864 77.674 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 1 2 2 33626000 0 6654900 7905000 490600 736180 17839000 237 170 239 1054;1055;1056;1057;1058;1059;1060;1061;1062 702;703;704;705;706;707;708;709 707 8 AEPTAAPHPVLKQVIKPR GTAPAQAKAEPTAAPH LKQVIKPRRKLAFRSG K A E P R R 3 1 0 0 0 1 1 0 1 1 1 2 0 0 4 0 1 0 0 2 0 18 2 1951.1367 Q86YP4;B5MC40;F5H7D9 Q86YP4 488 505 GATAD2A Transcriptional repressor p66-alpha yes no 3;4 6.7601E-08 93.106 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 3 2 99778000 0 19140000 18435000 0 0 62203000 238 170 240 1063;1064;1065;1066;1067;1068;1069 710;711;712;713;714;715;716 714 7 AEPVEVVAPR SPWGAEVKAEPVEVVA PVEVVAPRGKSGAALS K A E P R G 2 1 0 0 0 0 2 0 0 0 0 0 0 0 2 0 0 0 0 3 0 10 0 1065.5819 P09874 P09874 487 496 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.015692 67.334 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2 1 82574000 3696800 12368000 7020000 4782000 32710000 21997000 239 815 241 1070;1071;1072;1073;1074;1075;1076 717;718;719 719 3 AEPVEVVAPRGK SPWGAEVKAEPVEVVA EVVAPRGKSGAALSKK K A E G K S 2 1 0 0 0 0 2 1 0 0 0 1 0 0 2 0 0 0 0 3 0 12 1 1250.6983 P09874 P09874 487 498 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2;3 0.001855 77.124 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 77211000 10888000 13918000 13015000 8423500 19783000 11184000 240 815 242 1077;1078;1079;1080;1081;1082;1083;1084;1085;1086;1087;1088 720;721;722;723;724;725;726;727;728;729;730 726 11 AEQLMSDENCFK LESTYQRKAEQLMSDE MSDENCFKLMFIQSQG K A E F K L 1 0 1 1 1 1 2 0 0 0 1 1 1 1 0 1 0 0 0 0 0 12 0 1470.6119 Q96ST3 Q96ST3 1054 1065 SIN3A Paired amphipathic helix protein Sin3a yes yes 2 0.021901 51.135 By matching By matching By matching By matching By matching By MS/MS 1 1 1898600 0 603730 0 0 0 1294900 241 1420 243 1089;1090 731 731 1 AEQMHQSFVAETSQR EIEENLMKAEQMHQSF FVAETSQRISKLQEDT K A E Q R I 2 1 0 0 0 3 2 0 1 0 0 0 1 1 0 2 1 0 0 1 0 15 0 1747.7948 P49454 P49454 870 884 CENPF Centromere protein F yes yes 3 0.0051498 51.495 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4442000 0 777720 814470 256930 0 2592900 242 936 244 1091;1092;1093;1094 732 732 1 AERDSALETLQGQLEEK LEAERASRAERDSALE LQGQLEEKAQELGHSQ R A E E K A 2 1 0 1 0 2 4 1 0 0 3 1 0 0 0 1 1 0 0 0 0 17 1 1915.9487 Q14980-2;Q14980;F5H2L0;H0YFY6 Q14980-2 1158 1174 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2;3 3.5672E-73 126.25 By matching By MS/MS By matching By MS/MS By matching By MS/MS 2 1 1 110370000 0 77335000 0 16391000 0 16647000 243 1121 245 1095;1096;1097;1098 733;734;735;736;737 734 5 AEREVESGPRK ________________ EVESGPRKRFEQKSGA M A E R K R 1 2 0 0 0 0 3 1 0 0 0 1 0 0 1 1 0 0 0 1 0 11 2 1256.6473 Q5VZL5-2;Q5VZL5 Q5VZL5-2 2 12 ZMYM4 Zinc finger MYM-type protein 4 yes no 3 0.0077882 68.515 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 7551100 1544400 1681300 0 2039600 0 2285800 244 1213 246 1099;1100;1101;1102 738;739;740 738 3 AERMGFTEVTPVTGASLRR VLIGENEKAERMGFTE VTGASLRRTMLLLSRS K A E R R T 2 3 0 0 0 0 2 2 0 0 1 0 1 1 1 1 3 0 0 2 0 19 2 2077.0739 P55265;P55265-4;E7ENU4;P55265-5 P55265 799 817 ADAR Double-stranded RNA-specific adenosine deaminase yes no 3;4 2.4568E-100 133.9 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 3 178430000 37577000 23378000 3335000 36308000 4075000 73758000 245 352 247;248 1103;1104;1105;1106;1107;1108;1109;1110;1111;1112 741;742;743;744;745;746;747 742 34 7 AERVHELNEEIGK ISAEVAAKAERVHELN ELNEEIGKLLAKVEQL K A E G K L 1 1 1 0 0 0 4 1 1 1 1 1 0 0 0 0 0 0 0 1 0 13 1 1522.774 B7Z500;Q9Y383-2;Q9Y383;B7Z4Q3 B7Z500 120 132 LUC7L2;C7orf55 Putative RNA-binding protein Luc7-like 2;UPF0562 protein C7orf55 yes no 3 8.0069E-24 113.52 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 1 1 1 35267000 4025100 6616600 5858800 1700300 5654600 11412000 246 186 249 1113;1114;1115;1116;1117;1118;1119 748;749;750;751;752 750 5 AESCGSGNSTGYQIR AERVAAERAESCGSGN NSTGYQIRLQSRLPRK R A E I R L 1 1 1 0 1 1 1 3 0 1 0 0 0 0 0 3 1 0 1 0 0 15 0 1585.6791 Q9H2U1-3;Q9H2U1-2;F5GZS0;Q9H2U1;E7EWK3 Q9H2U1-3 281 295 DHX36 Probable ATP-dependent RNA helicase DHX36 yes no 2 0.00044315 71.354 By matching By matching By matching By matching By matching By MS/MS 1 1293300 0 0 0 0 0 1293300 247 502 250 1120 753 753 1 AESEASLLNVSTPK DIKLTQSKAESEASLL LLNVSTPKSTRRSGRI K A E P K S 2 0 1 0 0 0 2 0 0 0 2 1 0 0 1 3 1 0 0 1 0 14 0 1444.7409 Q96QE3;Q96QE3-2 Q96QE3 579 592 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 9.4243E-125 154.13 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 39964000 9897100 0 18191000 1596800 0 10278000 248 1415 251 1121;1122;1123;1124 754;755;756;757 757 2 AESTLQNSSSAVHTESNK KMKNTSSKAESTLQNS AVHTESNKLQPKRTAD K A E N K L 2 0 2 0 0 1 2 0 1 0 1 1 0 0 0 5 2 0 0 1 0 18 0 1888.8763 Q9H967;C9JE56 Q9H967 105 122 WDR76 WD repeat-containing protein 76 yes no 2;3 0.00072362 69.111 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 8613300 0 0 1145900 1892200 783290 4791900 249 1504 252 1125;1126;1127;1128;1129;1130 758;759;760;761;762 760 5 AESTLQNSSSAVHTESNKLQPK KMKNTSSKAESTLQNS ESNKLQPKRTADAMNL K A E P K R 2 0 2 0 0 2 2 0 1 0 2 2 0 0 1 5 2 0 0 1 0 22 1 2355.1666 Q9H967;C9JE56 Q9H967 105 126 WDR76 WD repeat-containing protein 76 yes no 3;4 7.1681E-10 86.179 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 1 54621000 13698000 7878300 9870700 7576300 9934300 5663500 250 1504 253 1131;1132;1133;1134;1135;1136;1137;1138;1139;1140;1141 763;764;765;766;767;768;769;770;771;772 763 10 AETAAGVGR ________________ ETAAGVGRFKTNYAVE M A E G R F 3 1 0 0 0 0 1 2 0 0 0 0 0 0 0 0 1 0 0 1 0 9 0 830.42463 Q12788;H3BN88 Q12788 2 10 TBL3 Transducin beta-like protein 3 yes no 2 0.015486 64.654 By matching By matching By matching By matching By matching By MS/MS 1 1 1541400 0 460940 0 0 0 1080400 251 1058 254 1142;1143 773 773 1 AETAAGVGRFK ________________ AAGVGRFKTNYAVERK M A E F K T 3 1 0 0 0 0 1 2 0 0 0 1 0 1 0 0 1 0 0 1 0 11 1 1105.588 Q12788;H3BN88 Q12788 2 12 TBL3 Transducin beta-like protein 3 yes no 2 1.2282E-42 136.49 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 38312000 5414000 6229200 4182000 0 7312700 15174000 252 1058 255 1144;1145;1146;1147;1148;1149;1150 774;775;776;777;778;779;780 780 7 AETLAGAMPNEAGGHPDAR QVALAQGRAETLAGAM AGGHPDARQLWDSPET R A E A R Q 5 1 1 1 0 0 2 3 1 0 1 0 1 0 2 0 1 0 0 0 0 19 0 1863.8534 Q9Y613 Q9Y613 463 481 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 3 0.0010889 56.817 By matching By matching By matching By matching By matching By MS/MS 1 1 1982100 0 0 0 0 572530 1409500 253 1659 256 1151;1152 781 781 1 AETNDSYHIILK CFILDTMKAETNDSYH DSYHIILK________ K A E L K - 1 0 1 1 0 0 1 0 1 2 1 1 0 0 0 1 1 0 1 0 0 12 0 1402.7092 Q12800-3;Q12800;F8VX55 Q12800-3 440 451 TFCP2 Alpha-globin transcription factor CP2 yes no 2 0.020234 73.632 By matching By MS/MS By matching By matching By matching By matching 1 1 2200900 0 564650 0 0 0 1636200 254 1060 257 1153;1154 782 782 0 AETPTAAEDDNEGDKKK VIPASEEKAETPTAAE DNEGDKKKKDKKKKKG K A E K K K 3 0 1 3 0 0 3 1 0 0 0 3 0 0 1 0 2 0 0 0 0 17 2 1817.8279 O60841 O60841 299 315 EIF5B Eukaryotic translation initiation factor 5B yes yes 4 0.0027363 51.591 By matching By matching By MS/MS By matching By matching By matching 1 291270 0 0 291270 0 0 0 255 734 258 1155 783 783 1 AEVEQVELPDGK SWTGFQTKAEVEQVEL QVELPDGKKRRKVLAL K A E G K K 1 0 0 1 0 1 3 1 0 0 1 1 0 0 1 0 0 0 0 2 0 12 0 1312.6511 E9PDD9;Q9NW13 E9PDD9 513 524 RBM28 RNA-binding protein 28 yes no 2 0.0026021 73.927 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 4807500 1005500 1274300 940020 0 0 1587700 256 422 259 1156;1157;1158;1159 784;785 784 2 AEVEQVELPDGKK SWTGFQTKAEVEQVEL VELPDGKKRRKVLALP K A E K K R 1 0 0 1 0 1 3 1 0 0 1 2 0 0 1 0 0 0 0 2 0 13 1 1440.746 E9PDD9;Q9NW13 E9PDD9 513 525 RBM28 RNA-binding protein 28 yes no 3 0.036238 36.292 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 3632700 935840 893210 371000 0 1432600 0 257 422 260 1160;1161;1162;1163 786 786 1 AEVGEDSGAR ________________ VGEDSGARALLALRSA M A E A R A 2 1 0 1 0 0 2 2 0 0 0 0 0 0 0 1 0 0 0 1 0 10 0 989.4414 P85037 P85037 2 11 FOXK1 Forkhead box protein K1 yes yes 2 0.039752 45.829 By matching By MS/MS By matching By matching By matching By matching 1 1 1490400 0 588990 0 0 0 901380 258 1017 261 1164;1165 787 787 1 AEVKERTEEPMETEPK EGEEKVEKAEVKERTE EPMETEPKGAADVEKV K A E P K G 1 1 0 0 0 0 6 0 0 0 0 2 1 0 2 0 2 0 0 1 0 16 2 1901.9041 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1595 1610 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.0096712 54.402 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 16533000 0 3344700 4330600 0 642600 8215100 259 486 262 1166;1167;1168;1169 788;789 789 2 AEVQLSCCCACHSK ADEGVSEKAEVQLSCC CCCACHSKDFTNNDMN K A E S K D 2 0 0 0 4 1 1 0 1 0 1 1 0 0 0 2 0 0 0 1 0 14 0 1708.679 Q9BX63-2;Q9BX63 Q9BX63-2 80 93 BRIP1 Fanconi anemia group J protein yes no 3 0.010191 49.298 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1878500 0 471960 579640 0 0 826860 260 1461 263 1170;1171;1172 790;791 790 2 AEVVQVIRNPAK RRLENERKAEVVQVIR QVIRNPAKLKRAKKKQ K A E A K L 2 1 1 0 0 1 1 0 0 1 0 1 0 0 1 0 0 0 0 3 0 12 1 1322.767 B4DY99;Q9H6F5 B4DY99 60 71 CCDC86 Coiled-coil domain-containing protein 86 yes no 2;3 0.0023958 74.962 By MS/MS By matching By matching By matching By MS/MS By MS/MS 3 2 1 2 1 7720700 2194600 774900 0 671880 3037700 1041600 261 143 264 1173;1174;1175;1176;1177;1178;1179;1180;1181 792;793;794;795 795 4 AEVVQVIRNPAKLK RRLENERKAEVVQVIR IRNPAKLKRAKKKQLR K A E L K R 2 1 1 0 0 1 1 0 0 1 1 2 0 0 1 0 0 0 0 3 0 14 2 1563.9461 B4DY99;Q9H6F5 B4DY99 60 73 CCDC86 Coiled-coil domain-containing protein 86 yes no 3 0.03351 50.467 By MS/MS By matching By matching By matching By matching By matching 1 1582600 1582600 0 0 0 0 0 262 143 265 1182 796 796 1 AEYGRLGLGEGAEEK GKAYSLGRAEYGRLGL LGEGAEEKSIPTLISR R A E E K S 2 1 0 0 0 0 4 4 0 0 2 1 0 0 0 0 0 0 1 0 0 15 1 1577.7686 C9JW69;P18754;P18754-2 C9JW69 338 352 RCC1 Regulator of chromosome condensation yes no 2;3 1.0252E-09 95.662 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 3 1 1 1 1 2 71204000 15202000 6336700 8137100 9251200 13165000 19111000 263 271 266 1183;1184;1185;1186;1187;1188;1189;1190;1191 797;798;799;800;801;802 797 4 AEYISLAEHEAK ENTQNQIKAEYISLAE SLAEHEAKMSSLSQSM K A E A K M 3 0 0 0 0 0 3 0 1 1 1 1 0 0 0 1 0 0 1 0 0 12 0 1359.667 F5H2B9;H0YNH8;G3XAG2;Q9BZF9 F5H2B9 811 822 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes no 3 0.0098026 57.52 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 5926000 660150 1219000 1078900 505750 956070 1506100 264 512 267 1192;1193;1194;1195;1196;1197 803;804;805 804 3 AEYLASIFGTEK ________________ ASIFGTEKDKVNCSFY M A E E K D 2 0 0 0 0 0 2 1 0 1 1 1 0 1 0 1 1 0 1 0 0 12 0 1327.666 Q01081-3;Q8WU68-3;Q8WU68-2;Q8WU68;Q01081-2;Q01081 Q01081-3 2 13 U2AF1;U2AF1L4 Splicing factor U2AF 35 kDa subunit;Splicing factor U2AF 26 kDa subunit yes no 2 1.2259E-97 150.51 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 118610000 27947000 23210000 0 0 0 67453000 265 1024 268 1198;1199;1200 806;807;808 808 3 AEYSYVK ________________ MAEYSYVKSTKLVLKG M A E V K S 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 2 1 0 7 0 858.41233 Q14331;E9PI42 Q14331 2 8 FRG1 Protein FRG1 yes no 1 0.0016778 114.78 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 24767000 2258700 0 7392900 2661100 5100200 7354200 266 1106 269 1201;1202;1203;1204;1205 809;810;811;812 811 4 AFAFQASQDK TFEHEMEKAFAFQASQ AFQASQDKVCSICMEV K A F D K V 3 0 0 1 0 2 0 0 0 0 0 1 0 2 0 1 0 0 0 0 0 10 0 1111.5298 B4DPR4;C9J494;Q9H000 B4DPR4 184 193 MKRN2 Probable E3 ubiquitin-protein ligase makorin-2 yes no 2 0.0093219 76.228 By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 1 1 1 5785500 1357200 1432800 1236700 653760 1105100 0 267 114 270 1206;1207;1208;1209;1210;1211 813;814;815;816 816 4 AFAMIIDK GPTNAIFKAFAMIIDK AFAMIIDKLEEDINSS K A F D K L 2 0 0 1 0 0 0 0 0 2 0 1 1 1 0 0 0 0 0 0 0 8 0 907.48372 F8VZX2;Q15366-4;Q15366-5;Q15366-3;Q15366;Q15366-2;H3BRU6;G3V0E8;B4DXP5;B4DRD7;F8W0G4;B4DLC0;F8VXH9;F8W1G6;H3BND9;Q15365 Q15365 71 78 PCBP2;PCBP1 Poly(rC)-binding protein 2;Poly(rC)-binding protein 1 no no 2 0.0063921 95.815 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 112190000 0 46394000 0 0 0 65795000 268 1135;548 271 1212;1213 817;818;819 817 3 AFANLRK ________________ MAFANLRKVLISDSLD M A F R K V 2 1 1 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 7 1 818.47627 O43175 O43175 2 8 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 0.0081283 95.957 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 13009000 881460 0 2674200 2618600 6834300 0 269 711 272 1214;1215;1216;1217 820;821 820 2 AFASTGLESGASGR GFQGTEARAFASTGLE LESGASGRGSYYSTGA R A F G R G 3 1 0 0 0 0 1 3 0 0 1 0 0 1 0 3 1 0 0 0 0 14 0 1309.6262 Q5TGY3 Q5TGY3 800 813 AHDC1 AT-hook DNA-binding motif-containing protein 1 yes yes 2 0.014379 47.621 By matching By matching By matching By matching By matching By MS/MS 1 1 1563300 0 386730 0 0 0 1176500 270 1199 273 1218;1219 822 822 1 AFAVQSAVR DARKRNPKAFAVQSAV FAVQSAVRMARSFHRT K A F V R M 3 1 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 2 0 9 0 947.51886 Q14692 Q14692 44 52 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 2 0.0065883 91.265 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 7526800 967850 803600 658980 686410 2271200 2138900 271 1113 274 1220;1221;1222;1223;1224;1225 823;824 824 2 AFAVSSSLITHSR YVCDTCGKAFAVSSSL SSLITHSRKHTGEKPY K A F S R K 2 1 0 0 0 0 0 0 1 1 1 0 0 1 0 4 1 0 0 1 0 13 0 1374.7256 Q9NPC7-3;Q9NPC7-2;Q9NPC7 Q9NPC7-3 451 463 MYNN Myoneurin yes no 3 0.0012646 79.886 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 11720000 6584100 1681500 0 804670 0 2650200 272 1524 275 1226;1227;1228;1229 825;826;827;828;829 829 5 AFAVSSSLITHSRK YVCDTCGKAFAVSSSL SLITHSRKHTGEKPYI K A F R K H 2 1 0 0 0 0 0 0 1 1 1 1 0 1 0 4 1 0 0 1 0 14 1 1502.8205 Q9NPC7-3;Q9NPC7-2;Q9NPC7 Q9NPC7-3 451 464 MYNN Myoneurin yes no 3 0.0003355 86.944 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 12288000 3017400 1647200 2172100 2478800 0 2973000 273 1524 276 1230;1231;1232;1233;1234 830;831;832;833 833 4 AFAYSSCLIRHQK YECTHCGKAFAYSSCL SCLIRHQKRHPRKKP_ K A F Q K R 2 1 0 0 1 1 0 0 1 1 1 1 0 1 0 2 0 0 1 0 0 13 1 1579.7929 Q8N8Y5 Q8N8Y5 179 191 ZFP41 Zinc finger protein 41 homolog yes yes 3 0.0012892 89.9 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 19093000 0 2591500 5149200 3946900 2720200 4685300 274 1309 277 1235;1236;1237;1238;1239 834;835;836;837 837 4 AFDHVLHLRPLSR MTPKPMIRAFDHVLHL LHLRPLSRLQAACHRL R A F S R L 1 2 0 1 0 0 0 0 2 0 3 0 0 1 1 1 0 0 0 1 0 13 1 1559.8685 Q9H6R4-4;Q9H6R4;Q9H6R4-2;G8JLK7;Q9H6R4-3;F5H6M7 Q9H6R4-4 466 478 NOL6 Nucleolar protein 6 yes no 3 0.018911 49.448 By matching By matching By matching By matching By matching By MS/MS 1 12477000 0 0 0 0 0 12477000 275 1497 278 1240 838 838 1 AFDTAGNGYCR LSPEGTCKAFDTAGNG TAGNGYCRSEGVVAVL K A F C R S 2 1 1 1 1 0 0 2 0 0 0 0 0 1 0 0 1 0 1 0 0 11 0 1230.5088 P49327 P49327 214 224 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 6.7948E-20 119.53 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3060300 0 513340 348010 0 401350 1797600 276 934 279 1241;1242;1243;1244 839 839 1 AFEDDAIQLVARK RSRLKHLKAFEDDAIQ AIQLVARKVAALSGDA K A F R K V 3 1 0 2 0 1 1 0 0 1 1 1 0 1 0 0 0 0 0 1 0 13 1 1474.778 Q13415 Q13415 699 711 ORC1 Origin recognition complex subunit 1 yes yes 3 4.1705E-24 113.38 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 41517000 0 5688300 0 0 0 35828000 277 1080 280 1245;1246 840;841 840 2 AFGGEEVILKGSPEEK LPPDIISKAFGGEEVI LKGSPEEKVVLAEKSE K A F E K V 1 0 0 0 0 0 4 3 0 1 1 2 0 1 1 1 0 0 0 1 0 16 1 1688.8621 Q5VUA4 Q5VUA4 1409 1424 ZNF318 Zinc finger protein 318 yes yes 3 0.0046251 51.03 By matching By MS/MS By matching By matching By matching By matching 1 1 1301200 0 940440 0 360720 0 0 278 1205 281 1247;1248 842 842 1 AFGYYGPLR GNKTELERAFGYYGPL FGYYGPLRSVWVARNP R A F L R S 1 1 0 0 0 0 0 2 0 0 1 0 0 1 1 0 0 0 2 0 0 9 0 1042.5236 B4E241;P84103 B4E241 29 37 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 yes no 2 0.020359 69.628 By matching By matching By matching By matching By MS/MS By matching 1 6215800 0 0 0 0 6215800 0 279 160 282 1249 843 843 1 AFHDPESAQQHFHRK IKCGTCTKAFHDPESA AQQHFHRKHCFLQKPS K A F R K H 2 1 0 1 0 2 1 0 3 0 0 1 0 2 1 1 0 0 0 0 0 15 1 1833.8659 Q9Y4E5-2;E9PH99;Q9Y4E5 Q9Y4E5-2 797 811 ZNF451 Zinc finger protein 451 yes no 4 0.016324 39.947 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 3417400 0 0 2432700 0 984710 0 280 436 283 1250;1251 844;845 844 1 AFIQSANLVVHQR FECHECGKAFIQSANL ANLVVHQRIHTGQKPY K A F Q R I 2 1 1 0 0 2 0 0 1 1 1 0 0 1 0 1 0 0 0 2 0 13 0 1481.8103 P13682;B4DUB8 P13682 258 270 ZNF35 Zinc finger protein 35 yes no 3 0.0012915 88.021 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 7303900 0 2408600 0 1713300 0 3181900 281 835 284 1252;1253;1254 846;847 846 2 AFIVTDEDIRK NTSQPLCKAFIVTDED VTDEDIRKQEERVQQV K A F R K Q 1 1 0 2 0 0 1 0 0 2 0 1 0 1 0 0 1 0 0 1 0 11 1 1305.6929 Q9UBB5 Q9UBB5 361 371 MBD2 Methyl-CpG-binding domain protein 2 yes yes 2;3 0.0022783 92.611 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 2 2 30527000 0 6787200 5176900 0 1277000 17286000 282 1581 285 1255;1256;1257;1258;1259;1260;1261;1262 848;849;850;851 849 4 AFIVTDEDIRKQEER NTSQPLCKAFIVTDED DIRKQEERVQQVRKKL K A F E R V 1 2 0 2 0 1 3 0 0 2 0 1 0 1 0 0 1 0 0 1 0 15 2 1847.9377 Q9UBB5 Q9UBB5 361 375 MBD2 Methyl-CpG-binding domain protein 2 yes yes 4 0.0024239 64.224 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 42430000 0 10808000 10058000 0 1109200 20456000 283 1581 286 1263;1264;1265;1266 852;853 853 2 AFKDTGKTPVEPEVAIHR ________________ EPEVAIHRIRITLTSR M A F H R I 2 1 0 1 0 0 2 1 1 1 0 2 0 1 2 0 2 0 0 2 0 18 2 1994.0585 P60866;P60866-2;E5RJX2;E5RIP1 P60866 2 19 RPS20 40S ribosomal protein S20 yes no 3;4 9.226E-09 94.325 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 1 284230000 162610000 10475000 48444000 27168000 23829000 11708000 284 979 287 1267;1268;1269;1270;1271;1272;1273;1274;1275;1276;1277 854;855;856;857;858;859;860;861 861 8 AFLDRPSQPTQETKK GCVDYWVKAFLDRPSQ QPTQETKKNFEVVDLV K A F K K N 1 1 0 1 0 2 1 0 0 0 1 2 0 1 2 1 2 0 0 0 0 15 2 1744.9108 F6RIS4;Q9H3M7 F6RIS4 72 86 TXNIP Thioredoxin-interacting protein yes no 4 0.036736 37.654 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 3979600 602160 668310 412650 1018600 1277900 0 285 532 288 1278;1279;1280;1281;1282 862 862 1 AFLLSSCLVQHQRIHTGEK YECKVCGKAFLLSSCL QRIHTGEKRYQCRECG K A F E K R 1 1 0 0 1 2 1 1 2 1 3 1 0 1 0 2 1 0 0 1 0 19 1 2223.1583 Q96LW9;C9J423;Q6P178 Q96LW9 331 349 ZSCAN31 Zinc finger and SCAN domain-containing protein 31 yes no 4 0.0011788 59.728 By matching By matching By matching By MS/MS By matching By matching 1 3025400 0 0 0 3025400 0 0 286 1406 289 1283 863;864 864 2 AFMGTPVQK GGDEKDIKAFMGTPVQ FMGTPVQKLDLAGTLP K A F Q K L 1 0 0 0 0 1 0 1 0 0 0 1 1 1 1 0 1 0 0 1 0 9 0 977.50044 P46013;F5H4V4;P46013-2 P46013 1189 1197 MKI67 Antigen KI-67 no no 2 5.848E-106 164.96 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 1 2 2 2 418370000 50249000 60952000 61621000 26937000 47513000 171100000 287 919;920 290;291 1284;1285;1286;1287;1288;1289;1290;1291;1292;1293;1294;1295 865;866;867;868;869;870;871;872;873;874;875 867 102 11 AFMVTDEDIRK NTTQPLCKAFMVTDED VTDEDIRKQEELVQQV K A F R K Q 1 1 0 2 0 0 1 0 0 1 0 1 1 1 0 0 1 0 0 1 0 11 1 1323.6493 O95983;O95983-2 O95983 217 227 MBD3 Methyl-CpG-binding domain protein 3 yes no 3 1.8058E-13 117.52 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 26704000 180290 6855700 4729900 0 321560 14616000 288 776 292 1296;1297;1298;1299;1300 876;877 877 2 AFNCGSNLLK FKCGECGKAFNCGSNL NCGSNLLKHQKTHTGE K A F L K H 1 0 2 0 1 0 0 1 0 0 2 1 0 1 0 1 0 0 0 0 0 10 0 1122.5492 Q8N8Y5 Q8N8Y5 151 160 ZFP41 Zinc finger protein 41 homolog yes yes 2 0.0020268 102.52 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 1 1 2 1 39795000 9522100 5472700 5512500 4349800 5992400 8945500 289 1309 293 1301;1302;1303;1304;1305;1306;1307;1308;1309 878;879;880;881;882;883 882 6 AFNCGSNLLKHQK FKCGECGKAFNCGSNL SNLLKHQKTHTGEKPY K A F Q K T 1 0 2 0 1 1 0 1 1 0 2 2 0 1 0 1 0 0 0 0 0 13 1 1515.7616 Q8N8Y5 Q8N8Y5 151 163 ZFP41 Zinc finger protein 41 homolog yes yes 3 0.026905 45.891 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 3539900 0 0 2424500 1115500 0 0 290 1309 294 1310;1311 884;885 884 2 AFNGNTGLIQHLR YKCKECGKAFNGNTGL TGLIQHLRIHTGEKPY K A F L R I 1 1 2 0 0 1 0 2 1 1 2 0 0 1 0 0 1 0 0 0 0 13 0 1439.7633 Q15776 Q15776 526 538 ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 yes yes 3 0.036296 40.767 By matching By matching By matching By matching By matching By MS/MS 1 1 1930900 0 0 0 467640 0 1463200 291 1147 295 1312;1313 886 886 1 AFNSVDPTFDNSVPSK LSDPVKRRAFNSVDPT FDNSVPSKSEAKDNFF R A F S K S 1 0 2 2 0 0 0 0 0 0 0 1 0 2 2 3 1 0 0 2 0 16 0 1723.8053 Q99543;Q99543-2;H7C3L7;C9IZ83;F5H621 Q99543 156 171 DNAJC2 DnaJ homolog subfamily C member 2 yes no 2 0.036446 37.477 By matching By MS/MS By matching By matching By matching By matching 1 4667200 0 4667200 0 0 0 0 292 1426 296 1314 887 887 0 AFPNKQGYVLSSIEGR KYQTRCIRAFPNKQGY VLSSIEGRVAVEYLDP R A F G R V 1 1 1 0 0 1 1 2 0 1 1 1 0 1 1 2 0 0 1 1 0 16 1 1764.9159 O43684-2;O43684;B4DDM6 O43684-2 187 202 BUB3 Mitotic checkpoint protein BUB3 yes no 3 0.00025169 71.354 By matching By MS/MS By matching By matching By matching By matching 1 3017500 0 3017500 0 0 0 0 293 719 297 1315 888 888 1 AFPNPYADYNK ________________ NPYADYNKSLAEGYFD R A F N K S 2 0 2 1 0 0 0 0 0 0 0 1 0 1 2 0 0 0 2 0 0 11 0 1298.5932 E9PHS0;O43813;F8WDS9 E9PHS0 5 15 LANCL1 LanC-like protein 1 yes no 2 0.010064 64.82 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 12886000 0 1958600 3985800 0 1208900 5732500 294 441 298 1316;1317;1318;1319 889;890 890 2 AFQEFIR EATKQVVKAFQEFIRS KAFQEFIRSTPYSAYD K A F I R S 1 1 0 0 0 1 1 0 0 1 0 0 0 2 0 0 0 0 0 0 0 7 0 909.47085 Q8IZ69-2;Q8IZ69;F2Z2W7 Q8IZ69-2 291 297 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A yes no 2 0.03659 84.244 By matching By matching By matching By matching By matching By MS/MS 1 3359900 0 0 0 0 0 3359900 295 478 299 1320 891 891 1 AFQLEEGEETEPDCK SLRKAKKRAFQLEEGE EETEPDCKYSKKHWKS R A F C K Y 1 0 0 1 1 1 5 1 0 0 1 1 0 1 1 0 1 0 0 0 0 15 0 1780.7462 P38432 P38432 113 127 COIL Coilin yes yes 2 0.00075906 75.968 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4013600 919060 1120300 554110 0 0 1420200 296 904 300 1321;1322;1323;1324 892;893;894;895 893 4 AFRAVVSQHAR DMNRFQSKAFRAVVSQ AVVSQHARQVAASPAV K A F A R Q 3 2 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 2 0 11 1 1240.6789 Q92547 Q92547 790 800 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 3 4.119E-07 107.06 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 14393000 975500 2651100 3989700 1399300 1280700 4096200 297 1351 301 1325;1326;1327;1328;1329;1330 896;897;898;899 897 4 AFRDVYHLNR HACEMCGKAFRDVYHL RDVYHLNRHKLSHSDE K A F N R H 1 2 1 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 1 0 10 1 1289.6629 Q14119;C6G496;P56270;G5E927;I3L2Z5;F5H7A6 Q14119 182 191 VEZF1;MAZ Vascular endothelial zinc finger 1;Myc-associated zinc finger protein no no 3 0.0030798 93.096 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 123470000 11002000 3922000 8072900 10589000 32521000 57366000 298 1094;219 302 1331;1332;1333;1334;1335;1336 900;901;902;903;904 901 5 AFRDVYHLNRHK HACEMCGKAFRDVYHL VYHLNRHKLSHSDEKP K A F H K L 1 2 1 1 0 0 0 0 2 0 1 1 0 1 0 0 0 0 1 1 0 12 2 1554.8168 Q14119;C6G496;P56270;G5E927;I3L2Z5;F5H7A6 Q14119 182 193 VEZF1;MAZ Vascular endothelial zinc finger 1;Myc-associated zinc finger protein no no 3 0.0090353 72.731 By matching By matching By MS/MS By matching By matching By matching 1 1 1 44597000 0 0 23248000 9291500 12057000 0 299 1094;219 303 1337;1338;1339 905 905 1 AFRQPASDALK EERQQFMKAFRQPASD QPASDALKNGVKKSSD K A F L K N 3 1 0 1 0 1 0 0 0 0 1 1 0 1 1 1 0 0 0 0 0 11 1 1202.6408 Q96QE3;Q96QE3-2 Q96QE3 406 416 ATAD5 ATPase family AAA domain-containing protein 5 yes no 3 0.0021463 87.713 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 8083400 0 2111600 1627900 451600 974210 2918100 300 1415 304 1340;1341;1342;1343;1344;1345 906;907 906 2 AFRTYHQLVLHSR THCSECGKAFRTYHQL HQLVLHSRVHKKDRRA K A F S R V 1 2 0 0 0 1 0 0 2 0 2 0 0 1 0 1 1 0 1 1 0 13 1 1626.8743 O75362 O75362 383 395 ZNF217 Zinc finger protein 217 yes yes 4 0.026304 46.282 By matching By matching By matching By matching By matching By MS/MS 1 1038900 0 0 0 0 0 1038900 301 740 305 1346 908 908 1 AFSASNGLTR YQCKECGKAFSASNGL SASNGLTRHRRIHTGE K A F T R H 2 1 1 0 0 0 0 1 0 0 1 0 0 1 0 2 1 0 0 0 0 10 0 1022.5145 Q96LW9;C9J423;Q6P178 Q96LW9 303 312 ZSCAN31 Zinc finger and SCAN domain-containing protein 31 yes no 2 0.00089383 105.17 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 33592000 3439500 2904200 4746900 4174900 7162900 11164000 302 1406 306 1347;1348;1349;1350;1351;1352 909;910;911;912;913 909 5 AFSCFSHLIVHQR YECKECGKAFSCFSHL SHLIVHQRIHTAEKPY K A F Q R I 1 1 0 0 1 1 0 0 2 1 1 0 0 2 0 2 0 0 0 1 0 13 0 1600.7933 P13682;B4DUB8 P13682 398 410 ZNF35 Zinc finger protein 35 yes no 3 0.0013707 80.69 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 13880000 0 0 0 5033600 0 8846700 303 835 307 1353;1354 914;915 915 2 AFSCLSSLQGHIK YVCMECGKAFSCLSSL SSLQGHIKAHAGEEPY K A F I K A 1 0 0 0 1 1 0 1 1 1 2 1 0 1 0 3 0 0 0 0 0 13 0 1446.7289 Q15973-4;F5GXU3;Q15973-1;Q5T2V5;Q15973 Q15973-4 180 192 ZNF124 Zinc finger protein 124 yes no 3 0.0018604 66.023 By matching By MS/MS By matching By matching By matching By matching 1 1300200 0 1300200 0 0 0 0 304 491 308 1355 916 916 1 AFSHSSNLILHQR HECNECGKAFSHSSNL SNLILHQRIHSGEKPY K A F Q R I 1 1 1 0 0 1 0 0 2 1 2 0 0 1 0 3 0 0 0 0 0 13 0 1508.7848 B3KRF7;E9PC66;P17029 B3KRF7 228 240 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 yes no 3 0.0037296 62.088 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 5440600 0 1138000 885570 370270 0 3046800 305 74 309 1356;1357;1358;1359 917 917 1 AFSQNSGLINHQR YKCLECGKAFSQNSGL SGLINHQRIHTGEKPY K A F Q R I 1 1 2 0 0 2 0 1 1 1 1 0 0 1 0 2 0 0 0 0 0 13 0 1470.7328 P17028 P17028 315 327 ZNF24 Zinc finger protein 24 yes yes 2;3 0.00028949 93.839 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 24098000 0 4265900 4716700 1960300 3724400 9430400 306 844 310 1360;1361;1362;1363;1364;1365;1366;1367 918;919;920;921;922;923;924 924 7 AFSQNSSLVQHER YMCKECGKAFSQNSSL SSLVQHERIHTGDKPY K A F E R I 1 1 1 0 0 2 1 0 1 0 1 0 0 1 0 3 0 0 0 1 0 13 0 1501.7274 P17098;B4DSF4 P17098 293 305 ZNF8 Zinc finger protein 8 yes no 3 0.00048016 92.856 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 7554400 1060900 1425600 1020600 611960 1340800 2094500 307 847 311 1368;1369;1370;1371;1372;1373 925;926;927;928 928 4 AFSQNTGLILHQR YHCKECGKAFSQNTGL TGLILHQRIHTGEKPY K A F Q R I 1 1 1 0 0 2 0 1 1 1 2 0 0 1 0 1 1 0 0 0 0 13 0 1483.7896 Q15776 Q15776 386 398 ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 yes yes 3 0.0089607 54.772 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 5350400 1065900 1015500 1277600 982730 1008600 0 308 1147 312 1374;1375;1376;1377;1378 929 929 1 AFSQRAHLAHHNR YKCKECGKAFSQRAHL AHLAHHNRIHTGYKPF K A F N R I 3 2 1 0 0 1 0 0 3 0 1 0 0 1 0 1 0 0 0 0 0 13 1 1543.7869 Q96SK3-2;F5H141;Q96SK3 Q96SK3-2 104 116 ZNF607 Zinc finger protein 607 yes no 3 0.024412 46.73 By MS/MS By matching By matching By matching By matching By matching 1 1752400 1752400 0 0 0 0 0 309 508 313 1379 930 930 1 AFSQSSDLIK YKCEVCSKAFSQSSDL SQSSDLIKHQRTHTGE K A F I K H 1 0 0 1 0 1 0 0 0 1 1 1 0 1 0 3 0 0 0 0 0 10 0 1094.5608 H3BS42;Q9H5H4 H3BS42 266 275 ZNF768 Zinc finger protein 768 yes no 2 1.2161E-15 123.75 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 24374000 3066400 3212000 3339700 4035800 5685400 5034900 310 646 314 1380;1381;1382;1383;1384;1385 931;932;933;934;935 932 5 AFSQSSDLIR YKCDDCGKAFSQSSDL SQSSDLIRHQRTHAAG K A F I R H 1 1 0 1 0 1 0 0 0 1 1 0 0 1 0 3 0 0 0 0 0 10 0 1122.5669 H3BS42;Q9H5H4;B7Z2Y7 H3BS42 490 499 ZNF768 Zinc finger protein 768 yes no 2 0.030524 57.149 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 7530600 1448700 0 454400 1108600 2048400 2470500 311 646 315 1386;1387;1388;1389;1390 936 936 1 AFSQSSDLIRHQR YKCDDCGKAFSQSSDL SDLIRHQRTHAAGRR_ K A F Q R T 1 2 0 1 0 2 0 0 1 1 1 0 0 1 0 3 0 0 0 0 0 13 1 1543.7855 H3BS42;Q9H5H4;B7Z2Y7 H3BS42 490 502 ZNF768 Zinc finger protein 768 yes no 3 0.024214 46.796 By matching By MS/MS By matching By matching By matching By matching 1 1 3570300 0 1536100 0 0 2034200 0 312 646 316 1391;1392 937 937 1 AFSQSSDLTK YECNECGKAFSQSSDL SQSSDLTKHQRIHTGE K A F T K H 1 0 0 1 0 1 0 0 0 0 1 1 0 1 0 3 1 0 0 0 0 10 0 1082.5244 B3KRF7;E9PC66;P17029 B3KRF7 256 265 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 yes no 2 0.0090532 76.927 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 6982800 0 0 3282900 511120 904640 2284200 313 74 317 1393;1394;1395;1396 938;939 938 2 AFSQSSHLYQHQR YECNECGKAFSQSSHL SHLYQHQRIHTGEKPY K A F Q R I 1 1 0 0 0 3 0 0 2 0 1 0 0 1 0 3 0 0 1 0 0 13 0 1587.7542 P17036 P17036 348 360 ZNF3 Zinc finger protein 3 yes yes 3 0.017818 47.712 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1842800 0 303360 0 380930 387660 770870 314 845 318 1397;1398;1399;1400 940 940 1 AFSQSSSLCIHQR YKCYECGKAFSQSSSL SSLCIHQRVHTGEKPY K A F Q R V 1 1 0 0 1 2 0 0 1 1 1 0 0 1 0 4 0 0 0 0 0 13 0 1519.7202 Q8N3J9;F5H507 Q8N3J9 179 191 ZNF664 Zinc finger protein 664 yes no 2;3 3.0396E-11 113.22 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 43513000 7779900 6155900 6574600 3576900 6324900 13101000 315 1296 319 1401;1402;1403;1404;1405;1406;1407;1408;1409;1410;1411;1412;1413 941;942;943;944;945;946;947;948 944 6 AFSQSSTLAQHQR YPCKECGKAFSQSSTL STLAQHQRMHTGEKAQ K A F Q R M 2 1 0 0 0 3 0 0 1 0 1 0 0 1 0 3 1 0 0 0 0 13 0 1459.7168 F5H290;P17097;B4DT08 F5H290 274 286 ZNF7 Zinc finger protein 7 yes no 3 0.0018595 70.089 By matching By matching By matching By matching By MS/MS By matching 1 975520 0 0 0 0 975520 0 316 125 320 1414 949 949 1 AFSQSTSLCIHQR FKCDECGKAFSQSTSL TSLCIHQRVHTKERNH K A F Q R V 1 1 0 0 1 2 0 0 1 1 1 0 0 1 0 3 1 0 0 0 0 13 0 1533.7358 Q8N3J9;F5H507 Q8N3J9 235 247 ZNF664 Zinc finger protein 664 yes no 3 2.5183E-05 96.334 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 13672000 1959100 2552000 2556900 0 2581500 4022000 317 1296 321 1415;1416;1417;1418;1419 950;951;952;953;954 950 5 AFSYSSQLAR FKCNECEKAFSYSSQL SYSSQLARHQKVHITE K A F A R H 2 1 0 0 0 1 0 0 0 0 1 0 0 1 0 3 0 0 1 0 0 10 0 1128.5564 P13682;B4DUB8 P13682 314 323 ZNF35 Zinc finger protein 35 yes no 2 3.5969E-05 109.83 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 10229000 0 0 3749900 1795400 0 4684200 318 835 322 1420;1421;1422 955;956 956 2 AFTCSSYLLIHQR YVCNECGKAFTCSSYL SYLLIHQRIHNGEKPY K A F Q R I 1 1 0 0 1 1 0 0 1 1 2 0 0 1 0 2 1 0 1 0 0 13 0 1594.7926 P13682;B4DUB8 P13682 454 466 ZNF35 Zinc finger protein 35 yes no 3 0.010575 53.034 By matching By MS/MS By matching By matching By matching By matching 1 4146600 0 4146600 0 0 0 0 319 835 323 1423 957 957 1 AFTQCNQLK YVCHLCGKAFTQCNQL FTQCNQLKTHVRTHTG K A F L K T 1 0 1 0 1 2 0 0 0 0 1 1 0 1 0 0 1 0 0 0 0 9 0 1108.5335 Q9NPC7-3;Q9NPC7-2;Q9NPC7 Q9NPC7-3 338 346 MYNN Myoneurin yes no 2 0.0066315 98.582 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 5494000 1099200 809770 0 973740 0 2611300 320 1524 324 1424;1425;1426;1427 958;959;960;961;962 960 5 AFTQSANLIVHQR FACNDCGKAFTQSANL ANLIVHQRSHTGEKPY K A F Q R S 2 1 1 0 0 2 0 0 1 1 1 0 0 1 0 1 1 0 0 1 0 13 0 1483.7896 P13682;B4DUB8 P13682 370 382 ZNF35 Zinc finger protein 35 yes no 2;3 0.0013419 74.611 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 1 1 2 2 26288000 4627700 4657800 866810 449320 3107800 12579000 321 835 325 1428;1429;1430;1431;1432;1433;1434;1435;1436 963;964;965;966;967 964 4 AFTQSSNLTVHQK YVCSKCGKAFTQSSNL SNLTVHQKIHSLEKTF K A F Q K I 1 0 1 0 0 2 0 0 1 0 1 1 0 1 0 2 2 0 0 1 0 13 0 1459.7419 P13682;B4DUB8 P13682 286 298 ZNF35 Zinc finger protein 35 yes no 2;3 2.7248E-15 107.17 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 2 2 2 2 2 49152000 12311000 10502000 7730500 7352300 2040600 9215100 322 835 326 1437;1438;1439;1440;1441;1442;1443;1444;1445;1446;1447;1448;1449 968;969;970;971;972;973;974;975;976;977 973 10 AFTQSTNLIK YKCTECEKAFTQSTNL TQSTNLIKHQRSHTGE K A F I K H 1 0 1 0 0 1 0 0 0 1 1 1 0 1 0 1 2 0 0 0 0 10 0 1121.6081 Q9UEG4 Q9UEG4 242 251 ZNF629 Zinc finger protein 629 yes yes 2 0.016158 66.92 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 20982000 2443500 3138200 2731000 3098400 807060 8764000 323 1586 327 1450;1451;1452;1453;1454;1455 978;979;980 980 3 AFTVSSSLHNHVK YKCKECGKAFTVSSSL SSLHNHVKIHTGEKPY K A F V K I 1 0 1 0 0 0 0 0 2 0 1 1 0 1 0 3 1 0 0 2 0 13 0 1425.7365 P58317;B4DNH5 P58317 292 304 ZNF121 Zinc finger protein 121 yes no 2;3 0.0011643 75.739 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 2 1 1 16764000 0 2125200 1365300 4427300 5670400 3175800 324 977 328 1456;1457;1458;1459;1460;1461 981;982;983;984 983 4 AFTYSTSHAVSVK YEQKQCGRAFTYSTSH TSHAVSVKMHTVEKPY R A F V K M 2 0 0 0 0 0 0 0 1 0 0 1 0 1 0 3 2 0 1 2 0 13 0 1396.6987 P58317;B4DNH5 P58317 124 136 ZNF121 Zinc finger protein 121 yes no 3 0.0033616 62.732 By matching By matching By matching By matching By MS/MS By matching 1 1 1 3425300 568560 0 0 0 1921700 935020 325 977 329 1462;1463;1464 985 985 1 AFVAIGDYNGHVGLGVK AGQRTRFKAFVAIGDY GHVGLGVKCSKEVATA K A F V K C 2 0 1 1 0 0 0 4 1 1 1 1 0 1 0 0 0 0 1 3 0 17 0 1715.8995 P15880;H0YEN5;E9PMM9;I3L404;E9PM36;E9PPT0 P15880 126 142 RPS2 40S ribosomal protein S2 yes no 3 8.9863E-59 124.16 By matching By matching By matching By MS/MS By matching By matching 1 1 71429000 0 24981000 0 46448000 0 0 326 839 330 1465;1466 986 986 1 AFVNSQIQGHKEMSK PLTSHILRAFVNSQIQ QGHKEMSKVWNDLRPK R A F S K V 1 0 1 0 0 2 1 1 1 1 0 2 1 1 0 2 0 0 0 1 0 15 1 1702.8461 Q9Y5X2 Q9Y5X2 417 431 SNX8 Sorting nexin-8 yes yes 3 0.016867 44.132 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1448100 0 0 171710 0 469620 806740 327 1657 331 1467;1468;1469 987 987 1 AFVQSGQLK CDYPDCGKAFVQSGQL FVQSGQLKTHQRLHTG K A F L K T 1 0 0 0 0 2 0 1 0 0 1 1 0 1 0 1 0 0 0 1 0 9 0 976.53418 Q7RTV3-2;Q7RTV3 Q7RTV3-2 205 213 ZNF367 Zinc finger protein 367 yes no 2 0.0059201 94.309 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1888800 663820 364140 0 0 860820 0 328 1247 332 1470;1471;1472 988 988 1 AGAANSQLSTSQPSLR PHVAGKPRAGAANSQL STSQPSLRHKVNEHEQ R A G L R H 3 1 1 0 0 2 0 1 0 0 2 0 0 0 1 4 1 0 0 0 0 16 0 1586.8012 E7ENF1;G5EA44;Q96C57;F5H7W8;H0YF83 E7ENF1 18 33 C12orf43 Uncharacterized protein C12orf43 yes no 2 0.0027343 62.203 By matching By matching By matching By matching By matching By MS/MS 1 1 1195700 0 478930 0 0 0 716780 329 350 333 1473;1474 989 989 1 AGAEDDEEKGEGTPREEGK VQEDEAEKAGAEDDEE GTPREEGKAGVQSVGE K A G G K A 2 1 0 2 0 0 6 4 0 0 0 2 0 0 1 0 1 0 0 0 0 19 2 2002.8716 Q86VM9;E7ERS3;Q86VM9-2;H7BXJ7 Q86VM9 150 168 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 4 0.00031032 68.845 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 13097000 1047000 1220100 1912000 2220700 2515900 4181800 330 372 334 1475;1476;1477;1478;1479;1480 990;991;992;993;994;995 994 6 AGAEGFVRVDRDYVLK CLGTTRGKAGAEGFVR VDRDYVLKSAELAKAG K A G L K S 2 2 0 2 0 0 1 2 0 0 1 1 0 1 0 0 0 0 1 3 0 16 2 1793.9424 Q9BUP3;Q9BUP3-3 Q9BUP3 99 114 HTATIP2 Oxidoreductase HTATIP2 yes no 3 0.0037818 75.102 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 13355000 0 3453600 0 2231200 0 7669800 331 1451 335 1481;1482;1483 996;997 997 2 AGAEREFRGLGDCLVK RLAADVGKAGAEREFR GLGDCLVKIYKSDGIK K A G V K I 2 2 0 1 1 0 2 3 0 0 2 1 0 1 0 0 0 0 0 1 0 16 2 1776.8941 P05141 P05141 148 163 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 3;4 0.0045896 78.529 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 2 1 2 1 79276000 21676000 3634500 32165000 6412500 8056900 7331300 332 795 336 1484;1485;1486;1487;1488;1489;1490;1491 998;999;1000;1001 1001 4 AGALVDPKDAEGSTCLHLAAK EAVKYLIKAGALVDPK TCLHLAAKKGHYEVVQ K A G A K K 5 0 0 2 1 0 1 2 1 0 3 2 0 0 1 1 1 0 0 1 0 21 1 2123.0681 Q9H9B1-3;Q9H9B1;C9JD67 Q9H9B1-3 828 848 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes no 4 0.015602 38.402 By matching By matching By matching By matching By matching By MS/MS 1 3783900 0 0 0 0 0 3783900 333 1507 337 1492 1002 1002 1 AGCTATCPVCFASASER KKYRKCEKAGCTATCP CFASASERCAKNGYTS K A G E R C 4 1 0 0 3 0 1 1 0 0 0 0 0 1 1 2 2 0 0 1 0 17 0 1843.7651 Q8NB78-2;F2Z2A7;Q8NB78 Q8NB78-2 56 72 KDM1B Lysine-specific histone demethylase 1B yes no 2 0.0032362 51.127 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 8790400 2357200 0 2237200 1169400 0 3026600 334 473 338 1493;1494;1495;1496 1003;1004;1005 1004 3 AGDEIDEPSERER HNSLPILKAGDEIDEP DEPSERERLRTVLKRL K A G E R L 1 2 0 2 0 0 4 1 0 1 0 0 0 0 1 1 0 0 0 0 0 13 1 1501.6645 B4DSM5;G3XAG1;Q96ME7;Q86XK6;B4E0X7 B4DSM5 199 211 ZNF512 Zinc finger protein 512 yes no 3 0.012601 53.237 By matching By matching By matching By matching By matching By MS/MS 1 1 1155400 0 225960 0 0 0 929400 335 123 339 1497;1498 1006 1006 1 AGEAAELQDAEVESSAK PTRDEPAKAGEAAELQ AEVESSAKSGKP____ K A G A K S 5 0 0 1 0 1 4 1 0 0 1 1 0 0 0 2 0 0 0 1 0 17 0 1703.785 E7ESW4;Q9NZT2-2;Q9NZT2 E7ESW4 492 508 OGFR Opioid growth factor receptor yes no 2 0.0022491 78.228 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 4406400 0 1282200 1570100 0 0 1554100 336 376 340 1499;1500;1501 1007;1008 1008 2 AGEGLGTSSGDAISGTDHNSLDSSLTR KIKLSVPKAGEGLGTS SLDSSLTREKIEAKIK K A G T R E 2 1 1 3 0 0 1 5 1 1 3 0 0 0 0 6 3 0 0 0 0 27 0 2604.1899 Q9ULL5-3;Q9ULL5-2;A6NFN6;Q9ULL5 Q9ULL5-3 1234 1260 PRR12 Proline-rich protein 12 yes no 3 3.6141E-09 59.561 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 22010000 3765300 1006800 0 0 0 17238000 337 1608 341 1502;1503;1504 1009;1010 1009 2 AGEGLGTSSGDAISGTDHNSLDSSLTREK KIKLSVPKAGEGLGTS DSSLTREKIEAKIKEV K A G E K I 2 1 1 3 0 0 2 5 1 1 3 1 0 0 0 6 3 0 0 0 0 29 1 2861.3275 Q9ULL5-3;Q9ULL5-2;A6NFN6;Q9ULL5 Q9ULL5-3 1234 1262 PRR12 Proline-rich protein 12 yes no 3;4 3.0994E-30 87.457 By MS/MS By matching By MS/MS By matching By matching By MS/MS 2 1 1 1 27841000 7701700 2633000 14905000 0 0 2602100 338 1608 342 1505;1506;1507;1508;1509 1011;1012;1013;1014;1015 1011 5 AGELIGTCKGHQCSLK TAKFWDVKAGELIGTC KGHQCSLKSVAFSKFE K A G L K S 1 0 0 0 2 1 1 3 1 1 2 2 0 0 0 1 1 0 0 0 0 16 1 1757.8553 F5GZ90;Q9NZJ0;Q9NZJ0-2 F5GZ90 87 102 DTL Denticleless protein homolog yes no 3 0.019967 40.941 By matching By MS/MS By matching By matching By matching By matching 1 1 1521200 0 982690 538550 0 0 0 339 499 343 1510;1511 1016 1016 1 AGELKVVNGAAASQPPSK QQLAEKAKAGELKVVN AASQPPSKRKRRWDQT K A G S K R 4 0 1 0 0 1 1 2 0 0 1 2 0 0 2 2 0 0 0 2 0 18 1 1722.9264 O75533 O75533 178 195 SF3B1 Splicing factor 3B subunit 1 yes yes 3 8.4067E-22 102.57 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 20250000 3517700 4126600 2793200 1727900 3205700 4879100 340 746 344 1512;1513;1514;1515;1516;1517 1017;1018;1019;1020;1021;1022 1022 6 AGELTPEEEAQYKK ________________ EEEAQYKKAFSAVDTD M A G K K A 2 0 0 0 0 1 4 1 0 0 1 2 0 0 1 0 1 0 1 0 0 14 1 1591.773 Q9NZT1 Q9NZT1 2 15 CALML5 Calmodulin-like protein 5 yes yes 2 0.00044009 88.163 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 37312000 0 10176000 13790000 0 3015500 10331000 341 1568 345 1518;1519;1520;1521 1023;1024 1023 2 AGEQQETASRELVKEPAR RLETLVRKAGEQQETA ELVKEPARAGDRQPEW K A G A R A 3 2 0 0 0 2 4 1 0 0 1 1 0 0 1 1 1 0 0 1 0 18 2 1998.013 Q14980-2;Q14980 Q14980-2 926 943 NUMA1 Nuclear mitotic apparatus protein 1 yes no 4 0.0031343 49.595 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 8546800 952340 2211400 1923200 524230 1707000 1228600 342 1121 346 1522;1523;1524;1525;1526;1527 1025;1026 1025 2 AGEQRAGSEVISR STQKGPLKAGEQRAGS AGSEVISRGGPRKADG K A G S R G 2 2 0 0 0 1 2 2 0 1 0 0 0 0 0 2 0 0 0 1 0 13 1 1358.6902 H0Y5J9;F2Z2W0;Q9H2D6-5;F8W6V6;Q9H2D6-3;Q9H2D6-2;Q9H2D6;F6WYE2;F6TR96 H0Y5J9 159 171 TRIOBP TRIO and F-actin-binding protein yes no 3 0.020436 48.532 By matching By matching By matching By matching By matching By MS/MS 1 1 899280 0 0 0 0 329820 569460 343 477 347 1528;1529 1027 1027 1 AGEVDVEQHTLAK HFLRRASKAGEVDVEQ VEQHTLAKYLMELTLI K A G A K Y 2 0 0 1 0 1 2 1 1 0 1 1 0 0 0 0 1 0 0 2 0 13 0 1395.6994 O95067 O95067 276 288 CCNB2 G2/mitotic-specific cyclin-B2 yes yes 2;3 2.4738E-09 103.97 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 3 2 3 31716000 7507400 2890000 3193600 6082100 7845200 4197500 344 761 348 1530;1531;1532;1533;1534;1535;1536;1537;1538;1539;1540;1541;1542;1543;1544;1545 1028;1029;1030;1031;1032;1033;1034;1035 1031 8 AGEVFIHK KLFEKYGKAGEVFIHK AGEVFIHKDKGFGFIR K A G H K D 1 0 0 0 0 0 1 1 1 1 0 1 0 1 0 0 0 0 0 1 0 8 0 899.4865 Q15233;F5GYZ3;C9JYS8;H7C367;C9IZL7 Q15233 100 107 NONO Non-POU domain-containing octamer-binding protein yes no 2 0.018279 81.296 By matching By matching By matching By MS/MS By matching By matching 1 1 2459600 0 0 0 1083100 0 1376500 345 1133 349 1546;1547 1036 1036 1 AGEVFIHKDK KLFEKYGKAGEVFIHK EVFIHKDKGFGFIRLE K A G D K G 1 0 0 1 0 0 1 1 1 1 0 2 0 1 0 0 0 0 0 1 0 10 1 1142.6084 Q15233;F5GYZ3;C9JYS8;H7C367;C9IZL7 Q15233 100 109 NONO Non-POU domain-containing octamer-binding protein yes no 2 0.03016 70.942 By MS/MS By matching By matching By matching By matching By matching 1 429210 429210 0 0 0 0 0 346 1133 350 1548 1037 1037 1 AGEVFIHKDKGFGFIR KLFEKYGKAGEVFIHK DKGFGFIRLETRTLAE K A G I R L 1 1 0 1 0 0 1 3 1 2 0 2 0 3 0 0 0 0 0 1 0 16 2 1819.9733 Q15233;F5GYZ3;C9JYS8;H7C367;C9IZL7 Q15233 100 115 NONO Non-POU domain-containing octamer-binding protein yes no 4 0.0019341 68.044 By matching By matching By matching By MS/MS By matching By matching 1 5360900 0 0 0 5360900 0 0 347 1133 351 1549 1038 1038 1 AGEVICIDD GLDRKEPRAGEVICID GEVICIDD________ R A G D D - 1 0 0 2 1 0 1 1 0 2 0 0 0 0 0 0 0 0 0 1 0 9 0 990.43281 Q12873;E9PG89;Q12873-2 Q12873 1992 2000 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 1 0.0014094 91.9 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 6359100 0 2337200 0 0 0 4021900 348 430 352 1550;1551 1039;1040 1040 2 AGFAGDDAPR DNGSGMCKAGFAGDDA FAGDDAPRAVFPSIVG K A G P R A 3 1 0 2 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 0 0 10 0 975.44101 F5H0N0;B4E335;P63261;P60709;I3L3I4;G5E9R0;I3L3R2;E7EVS6;I3L3I0;I3L1U9;E7EQV5;Q5T8M8;A6NL76;B4DW52;P68133;P68032;Q5T8M7;F5H1C1;P63267;P62736;C9JUM1;C9JZR7;C9JTX5;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;I3L4N8;E9PG30;Q6S8J3;P0CG38;A5A3E0;F8WCH0;P0CG39 F5H0N0 19 28 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2;POTEE;POTEI;POTEF;POTEJ Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member I;POTE ankyrin domain family member F;POTE ankyrin domain family member J yes no 2 0.0078923 83.862 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 141050000 30273000 16243000 22402000 13818000 28157000 30157000 349 164 353 1552;1553;1554;1555;1556;1557 1041;1042;1043;1044;1045 1045 5 AGFAGDDAPRAVFPSIVGRPR DNGSGMCKAGFAGDDA PSIVGRPRHQGVMVGM K A G P R H 4 3 0 2 0 0 0 3 0 1 0 0 0 2 3 1 0 0 0 2 0 21 2 2155.1287 F5H0N0;B4E335;P63261;P60709;I3L3I4;G5E9R0;I3L3R2;E7EVS6;I3L3I0;I3L1U9;E7EQV5;Q5T8M8;A6NL76;B4DW52;P68133;P68032;Q5T8M7;F5H1C1;P63267;P62736;C9JUM1;C9JZR7;C9JTX5;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;I3L4N8;E9PG30;Q6S8J3;P0CG38;A5A3E0;F8WCH0 F5H0N0 19 39 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2;POTEE;POTEI;POTEF Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member I;POTE ankyrin domain family member F yes no 3;4 3.579E-05 73.76 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 2 1 259810000 0 47635000 83233000 89808000 39138000 0 350 164 354 1558;1559;1560;1561;1562 1046;1047;1048;1049;1050;1051 1047 6 AGGAAVVITEPEHTK ARPATAGKAGGAAVVI ITEPEHTKERVKLEGS K A G T K E 3 0 0 0 0 0 2 2 1 1 0 1 0 0 1 0 2 0 0 2 0 15 0 1478.7729 Q9P258 Q9P258 78 92 RCC2 Protein RCC2 yes yes 2;3 2.1526E-56 129.76 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 182490000 22275000 50756000 16387000 15337000 21719000 56020000 351 1575 355 1563;1564;1565;1566;1567;1568;1569;1570;1571;1572;1573;1574;1575 1052;1053;1054;1055;1056;1057;1058;1059;1060;1061;1062;1063;1064;1065 1058 14 AGGAAVVITEPEHTKER ARPATAGKAGGAAVVI EPEHTKERVKLEGSKC K A G E R V 3 1 0 0 0 0 3 2 1 1 0 1 0 0 1 0 2 0 0 2 0 17 1 1763.9166 Q9P258 Q9P258 78 94 RCC2 Protein RCC2 yes yes 3;4 0 195.87 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3 2 2 2 3 697090000 184230000 157850000 101180000 86624000 70767000 96444000 352 1575 356 1576;1577;1578;1579;1580;1581;1582;1583;1584;1585;1586;1587;1588;1589;1590;1591 1066;1067;1068;1069;1070;1071;1072;1073;1074;1075;1076;1077;1078;1079 1078 14 AGGAAVVITEPEHTKERVK ARPATAGKAGGAAVVI EHTKERVKLEGSKCKG K A G V K L 3 1 0 0 0 0 3 2 1 1 0 2 0 0 1 0 2 0 0 3 0 19 2 1991.08 Q9P258 Q9P258 78 96 RCC2 Protein RCC2 yes yes 3;4 1.9688E-37 109.48 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 3 3 2 2 141190000 23292000 39838000 25624000 22117000 9202800 21116000 353 1575 357 1592;1593;1594;1595;1596;1597;1598;1599;1600;1601;1602;1603;1604;1605;1606 1080;1081;1082;1083;1084;1085;1086;1087;1088;1089;1090;1091;1092 1084 13 AGGKPSQSPSQEAAGEAVLGAK PPAASAGKAGGKPSQS GEAVLGAKTKATSLVD K A G A K T 5 0 0 0 0 2 2 4 0 0 1 2 0 0 2 3 0 0 0 1 0 22 1 2039.0283 H7C1H8;P00519;P00519-2 H7C1H8 725 746 ABL1 Tyrosine-protein kinase ABL1 yes no 3 3.4152E-15 90.397 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 15176000 2088500 2342500 2676700 1258800 2118300 4690700 354 666 358 1607;1608;1609;1610;1611;1612;1613 1093;1094;1095;1096;1097;1098;1099 1099 7 AGGRDCGTSVPQGLLK QDLRAGFKAGGRDCGT SVPQGLLKAARKSGQL K A G L K A 1 1 0 1 1 1 0 4 0 0 2 1 0 0 1 1 1 0 0 1 0 16 1 1614.8148 Q9H9A6 Q9H9A6 18 33 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 3 0.017089 41.542 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 3710300 450610 802660 335620 0 333370 1788000 355 1505 359 1614;1615;1616;1617;1618 1100 1100 1 AGGVGLNLSAASR TIMLLSLKAGGVGLNL LNLSAASRVFLMDPAW K A G S R V 3 1 1 0 0 0 0 3 0 0 2 0 0 0 0 2 0 0 0 1 0 13 0 1171.6309 Q14527;Q14527-2;H7C5K0 Q14527 914 926 HLTF Helicase-like transcription factor yes no 2 2.7567E-05 96.756 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 24699000 1069500 4178600 2321700 0 0 17130000 356 1107 360 1619;1620;1621;1622 1101;1102;1103;1104 1103 3 AGHLILQDR LHEHPLYRAGHLILQD GHLILQDRASCLPAML R A G D R A 1 1 0 1 0 1 0 1 1 1 2 0 0 0 0 0 0 0 0 0 0 9 0 1021.5669 C9JJU9;Q96P11-2;G3V0G9;Q96P11;Q96P11-4;Q96P11-3;Q63ZY6;Q63ZY6-5;Q63ZY6-6;Q63ZY6-2 C9JJU9 167 175 NSUN5;NSUN5P2 Putative methyltransferase NSUN5;Putative methyltransferase NSUN5C yes no 2 0.014355 78.113 By matching By matching By matching By matching By matching By MS/MS 1 1 837890 0 0 0 144370 0 693520 357 255 361 1623;1624 1105 1105 1 AGHSENGVEEDTEGRTGPK PAPSGHPKAGHSENGV TEGRTGPKEGTPGSPS K A G P K E 1 1 1 1 0 0 4 4 1 0 0 1 0 0 1 1 2 0 0 1 0 19 1 1968.8773 E7ESW4;Q9NZT2-2;Q9NZT2 E7ESW4 348 366 OGFR Opioid growth factor receptor yes no 3;4 0.00042619 67.153 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 2 2 2 2 8757900 375230 2016000 1766900 903150 1017900 2678700 358 376 362 1625;1626;1627;1628;1629;1630;1631;1632;1633;1634;1635 1106;1107;1108 1107 3 AGIRAYPTVK AYAQTCQKAGIRAYPT IRAYPTVKFYFYERAK K A G V K F 2 1 0 0 0 0 0 1 0 1 0 1 0 0 1 0 1 0 1 1 0 10 1 1074.6186 Q8IXB1;Q8IXB1-2;F8W884 Q8IXB1 738 747 DNAJC10 DnaJ homolog subfamily C member 10 yes no 2 0.0069689 99.568 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 51417000 3925800 14658000 5320700 3823800 14199000 9489400 359 1287 363 1636;1637;1638;1639;1640;1641 1109 1109 1 AGITTTLNSR QQTISIAKAGITTTLN ITTTLNSRCSVLAAAN K A G S R C 1 1 1 0 0 0 0 1 0 1 1 0 0 0 0 1 3 0 0 0 0 10 0 1032.5564 P33992;B1AHB1 P33992 472 481 MCM5 DNA replication licensing factor MCM5 yes no 2 0.0026343 100.88 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 17182000 1394000 3232200 0 0 3315200 9240300 360 892 364 1642;1643;1644;1645 1110;1111 1110 2 AGKFPSLLTHNENMVAK ILGPGLNKAGKFPSLL HNENMVAKVDEVKSTI K A G A K V 2 0 2 0 0 0 1 1 1 0 2 2 1 1 1 1 1 0 0 1 0 17 1 1855.9615 P62906 P62906 131 147 RPL10A 60S ribosomal protein L10a yes yes 3;4 9.9348E-110 137.93 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 24963000 8313400 544990 2492300 1350900 7209700 5051400 361 997 365 1646;1647;1648;1649;1650;1651 1112;1113;1114;1115 1114 4 AGLESGAEPGDGDSDTTK SKKDKKAKAGLESGAE DGDSDTTKKKKKKKKA K A G T K K 2 0 0 3 0 0 2 4 0 0 1 1 0 0 1 2 2 0 0 0 0 18 0 1705.7279 O60832 O60832 481 498 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2 0.0016684 57.173 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 6312000 0 615410 473560 579350 2413700 2230000 362 733 366 1652;1653;1654;1655;1656 1116 1116 1 AGLESGAEPGDGDSDTTKK SKKDKKAKAGLESGAE GDSDTTKKKKKKKKAK K A G K K K 2 0 0 3 0 0 2 4 0 0 1 2 0 0 1 2 2 0 0 0 0 19 1 1833.8228 O60832 O60832 481 499 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 3 0.0067385 47.855 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 11182000 1792000 1056400 649190 1228300 4017000 2439300 363 733 367 1657;1658;1659;1660;1661;1662 1117;1118 1117 1 AGLESGAEPGDGDSDTTKKK SKKDKKAKAGLESGAE DSDTTKKKKKKKKAKE K A G K K K 2 0 0 3 0 0 2 4 0 0 1 3 0 0 1 2 2 0 0 0 0 20 2 1961.9178 O60832 O60832 481 500 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 4 0.00085755 54.292 By matching By matching By matching By matching By MS/MS By matching 1 1176600 0 0 0 0 1176600 0 364 733 368 1663 1119 1119 1 AGLEVLGSSDPTTSASR VGSCYVARAGLEVLGS DPTTSASRVAGTTARS R A G S R V 2 1 0 1 0 0 1 2 0 0 2 0 0 0 1 4 2 0 0 1 0 17 0 1646.8111 A8MTM6 A8MTM6 815 831 DLGAP5 Disks large-associated protein 5 yes yes 2 0.022505 39.338 By matching By matching By matching By matching By matching By MS/MS 1 1814000 0 0 0 0 0 1814000 365 42 369 1664 1120 1120 1 AGLNCSTENMPIK DAVKEALRAGLNCSTE STENMPIKINLIAPPR R A G I K I 1 0 2 0 1 0 1 1 0 1 1 1 1 0 1 1 1 0 0 0 0 13 0 1433.6643 H0YJS4;G3V4T5;P05198 H0YJS4 171 183 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 yes no 3 0.022701 48.948 By MS/MS By matching By matching By matching By matching By matching 1 0 0 0 0 0 0 0 366 587 370 1665 1121 1121 63 1 AGLNYHTMAEHSAKPSDAEASEGGEQEER CRKQFKSKAGLNYHTM EGGEQEERERLRKVLK K A G E R E 5 1 1 1 0 1 6 3 2 0 1 1 1 0 1 3 1 0 1 0 0 29 1 3100.3428 Q96KM6 Q96KM6 553 581 ZNF512B Zinc finger protein 512B yes yes 4;5 6.1496E-12 63.291 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 36881000 5642600 4940700 8346400 3891900 5829100 8230600 367 1402 371 1666;1667;1668;1669;1670;1671;1672;1673;1674;1675;1676;1677 1122;1123;1124;1125;1126;1127;1128;1129;1130;1131;1132 1125 8 AGLNYHTMAEHSAKPSDAEASEGGEQEERER CRKQFKSKAGLNYHTM GEQEERERLRKVLKQM K A G E R L 5 2 1 1 0 1 7 3 2 0 1 1 1 0 1 3 1 0 1 0 0 31 2 3385.4865 Q96KM6 Q96KM6 553 583 ZNF512B Zinc finger protein 512B yes yes 5;6 2.5823E-05 42.93 By MS/MS By matching By matching By MS/MS By matching By matching 2 2 1 2 1 19833000 4838700 0 6170800 2702500 3718100 2402700 368 1402 372 1678;1679;1680;1681;1682;1683;1684;1685 1133;1134 1133 2 AGLQFPVGR KAKTRSSRAGLQFPVG GLQFPVGRVHRLLRKG R A G G R V 1 1 0 0 0 1 0 2 0 0 1 0 0 1 1 0 0 0 0 1 0 9 0 943.52395 Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;Q96QV6;P16104;Q9BTM1-2;C9JE22;A8MQC5;Q8IUE6;Q71UI9;P0C0S5;Q71UI9-2;C9J0D1 Q99878 22 30 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AA;H2AFX;H2AFV;HIST2H2AB;H2AFZ Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 1-A;Histone H2A.x;Histone H2A.V;Histone H2A type 2-B;Histone H2A.Z;Histone H2A no no 2 2.1975E-12 124.08 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 2 1 1 41057000 10784000 15507000 0 969030 0 13798000 369 792;816 373 1686;1687;1688;1689;1690 1135;1136;1137;1138 1135 4 AGLSPANCQSDRVNLEK KAAGEGSKAGLSPANC SDRVNLEKSLLMKKAA K A G E K S 2 1 2 1 1 1 1 1 0 0 2 1 0 0 1 2 0 0 0 1 0 17 1 1857.9003 Q14692 Q14692 549 565 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 3 0.00058287 82.578 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 13137000 2428300 2469500 1817100 2081500 2223900 2116700 370 1113 374 1691;1692;1693;1694;1695;1696 1139;1140 1140 2 AGLVIGKGGETIK EIMIPAGKAGLVIGKG GKGGETIKQLQERAGV K A G I K Q 1 0 0 0 0 0 1 4 0 2 1 2 0 0 0 0 1 0 0 1 0 13 1 1241.7343 Q92945-2;Q92945;E7EP96 Q92945-2 245 257 KHSRP Far upstream element-binding protein 2 no no 2;3 1.072E-109 152.4 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 3 2 1156700000 81652000 152470000 119990000 55650000 341050000 405840000 371 1366 375 1697;1698;1699;1700;1701;1702;1703;1704;1705;1706;1707;1708;1709;1710 1141;1142;1143;1144;1145;1146;1147;1148;1149;1150;1151;1152;1153 1142 13 AGLVIGKGGETIKQLQER EIMIPAGKAGLVIGKG TIKQLQERAGVKMILI K A G E R A 1 1 0 0 0 2 2 4 0 2 2 2 0 0 0 0 1 0 0 1 0 18 2 1896.0793 Q92945-2;Q92945;E7EP96 Q92945-2 245 262 KHSRP Far upstream element-binding protein 2 no no 3;4 2.9023E-155 151.31 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 6 3 1580500000 636770000 104490000 530840000 19836000 117470000 171080000 372 1366 376 1711;1712;1713;1714;1715;1716;1717;1718;1719;1720;1721;1722;1723;1724;1725;1726;1727 1154;1155;1156;1157;1158;1159;1160;1161;1162;1163;1164;1165;1166;1167;1168;1169 1156 15 AGLYGLPR TDDDRRWKAGLYGLPR AGLYGLPRRSGKLKDL K A G P R R 1 1 0 0 0 0 0 2 0 0 2 0 0 0 1 0 0 0 1 0 0 8 0 845.47594 P49327 P49327 42 49 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.029454 71.342 By matching By matching By matching By matching By matching By MS/MS 1 1030900 0 0 0 0 0 1030900 373 934 377 1728 1170 1170 1 AGNLGGGVVTIER ERIKVNGKAGNLGGGV GGVVTIERSKSKITVT K A G E R S 1 1 1 0 0 0 1 4 0 1 1 0 0 0 0 0 1 0 0 2 0 13 0 1241.6728 P35268 P35268 53 65 RPL22 60S ribosomal protein L22 yes yes 2 0.0022314 70.889 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 9017800 1745400 1082100 841560 543020 2353000 2452800 374 897 378 1729;1730;1731;1732;1733;1734 1171;1172;1173 1172 3 AGPEGIEPR HWENRFAKAGPEGIEP GPEGIEPRGEIAQNLL K A G P R G 1 1 0 0 0 0 2 2 0 1 0 0 0 0 2 0 0 0 0 0 0 9 0 924.46649 Q14146 Q14146 859 867 URB2 Unhealthy ribosome biogenesis protein 2 homolog yes yes 2 0.032961 63.184 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 6119700 443580 792910 967310 465380 1302700 2147800 375 1095 379 1735;1736;1737;1738;1739;1740 1174 1174 1 AGPEGTSQEIPK FRKKGGWKAGPEGTSQ GTSQEIPKYITASTFA K A G P K Y 1 0 0 0 0 1 2 2 0 1 0 1 0 0 2 1 1 0 0 0 0 12 0 1212.5986 Q99575;E5RK39 Q99575 89 100 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 2 6.5082E-27 123.26 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 27378000 4075300 4141700 2312000 2190500 6996500 7662000 376 1428 380 1741;1742;1743;1744;1745;1746;1747 1175;1176;1177;1178;1179;1180 1176 6 AGPGSEELTVTNAR GGECEIRRAGPGSEEL ELTVTNARYVPVSCEK R A G A R Y 2 1 1 0 0 0 2 2 0 0 1 0 0 0 1 1 2 0 0 1 0 14 0 1400.6896 Q9BW19 Q9BW19 490 503 KIFC1 Kinesin-like protein KIFC1 yes yes 2 2.0283E-05 94.023 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 11942000 299230 3405500 1086900 296700 1019500 5834400 377 1456 381 1748;1749;1750;1751;1752;1753 1181;1182;1183 1183 3 AGPGSEELTVTNARYVPVSCEK GGECEIRRAGPGSEEL YVPVSCEKEVDALLHL R A G E K E 2 1 1 0 1 0 3 2 0 0 1 1 0 0 2 2 2 0 1 3 0 22 1 2363.1427 Q9BW19 Q9BW19 490 511 KIFC1 Kinesin-like protein KIFC1 yes yes 3 0.0044447 45.844 By matching By MS/MS By matching By matching By matching By matching 1 2651000 0 2651000 0 0 0 0 378 1456 382 1754 1184 1184 1 AGPGSLELCGLPSQK RRRLQKKKAGPGSLEL LCGLPSQKTASLKKRK K A G Q K T 1 0 0 0 1 1 1 3 0 0 3 1 0 0 2 2 0 0 0 0 0 15 0 1512.7606 Q14684-2;Q14684 Q14684-2 557 571 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 2 0 298.78 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 3 1 504140000 160200000 91646000 48108000 73561000 22241000 108380000 379 1111 383 1755;1756;1757;1758;1759;1760;1761;1762;1763 1185;1186;1187;1188;1189;1190;1191;1192;1193;1194 1185 10 AGPNASIISLK EWNEVLNKAGPNASII NASIISLKSDKKRKLE K A G L K S 2 0 1 0 0 0 0 1 0 2 1 1 0 0 1 2 0 0 0 0 0 11 0 1069.6132 Q9H0A0;E7ESU4;E9PMN9 Q9H0A0 979 989 NAT10 N-acetyltransferase 10 yes no 2 0.034398 60.301 By matching By matching By matching By matching By matching By MS/MS 1 1 4405900 0 174560 0 0 0 4231400 380 1477 384 1764;1765 1195 1195 0 AGPNASIISLKSDK EWNEVLNKAGPNASII IISLKSDKKRKLEAKQ K A G D K K 2 0 1 1 0 0 0 1 0 2 1 2 0 0 1 3 0 0 0 0 0 14 1 1399.7671 Q9H0A0;E7ESU4;E9PMN9 Q9H0A0 979 992 NAT10 N-acetyltransferase 10 yes no 2;3 0.0011283 83.243 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 2 2 2 2 16391000 2798400 3953100 962360 0 5035000 3642700 381 1477 385 1766;1767;1768;1769;1770;1771;1772;1773;1774;1775 1196;1197;1198;1199;1200 1200 5 AGPSRTVGLFLQGGK AVKTHNLKAGPSRTVG GLFLQGGKDWSPTLYI K A G G K D 1 1 0 0 0 1 0 4 0 0 2 1 0 1 1 1 1 0 0 1 0 15 1 1486.8256 P43304;P43304-2;F8W6E4 P43304 459 473 GPD2 Glycerol-3-phosphate dehydrogenase, mitochondrial yes no 3 0.00065951 81.185 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 3851300 1121200 1532600 0 1197500 0 0 382 918 386 1776;1777;1778 1201;1202 1201 2 AGPVAVQVK PAKGPPQKAGPVAVQV GPVAVQVKAEKPMDNS K A G V K A 2 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 3 0 9 0 867.5178 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 592 600 TCOF1 Treacle protein no no 2 0.0085293 87.181 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 28240000 6793300 6770200 0 2233500 0 12443000 383 1082;383 387 1779;1780;1781;1782 1203;1204;1205 1205 3 AGQCVIGLQMGTNK NFDDATMKAGQCVIGL GLQMGTNKCASQSGMT K A G N K C 1 0 1 0 1 2 0 3 0 1 1 1 1 0 0 0 1 0 0 1 0 14 0 1475.7225 E7ENR3;B4DDF4;Q99439;B4DUT8;H3BTZ5;H3BVI6 E7ENR3 140 153 CNN2 Calponin-2 yes no 2 2.7898E-229 177.93 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 86329000 15771000 8552800 34524000 3181000 4543500 19757000 384 80 388 1783;1784;1785;1786;1787;1788 1206;1207;1208;1209;1210 1207 5 AGQPHSSSDAAQAPAEQPHSSSDAAQAPCPR QKKQRPARAGQPHSSS AAQAPCPRERCLGPPT R A G P R E 8 1 0 2 1 4 1 1 2 0 0 0 0 0 5 6 0 0 0 0 0 31 0 3112.3653 G5E9E2;Q5J9I4;P29372-2;P29372;A2IDA3 G5E9E2 11 41 MPG DNA-3-methyladenine glycosylase yes no 4 1.238E-27 75.156 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 54512000 4439100 8243900 8344500 4337300 8431700 20716000 385 594 389 1789;1790;1791;1792;1793;1794 1211;1212;1213;1214;1215 1214 5 AGQVMCVAQGSGHTHSVGTVCCSR VRIWRMNKAGQVMCVA VGTVCCSRLKESFLVT K A G S R L 2 1 0 0 3 2 0 4 2 0 0 0 1 0 0 3 2 0 0 4 0 24 0 2545.1043 Q12788 Q12788 408 431 TBL3 Transducin beta-like protein 3 yes yes 3;4 0.00015196 56.488 By matching By matching By MS/MS By matching By matching By MS/MS 1 2 1 1 2 12970000 2522600 1575500 1807600 0 1396500 5668300 386 1058 390 1795;1796;1797;1798;1799;1800;1801 1216;1217;1218 1218 3 AGSGAPGGTSKGPAEESR EPVTPTSKAGSGAPGG KGPAEESRVRRHKHSS K A G S R V 3 1 0 0 0 0 2 5 0 0 0 1 0 0 2 3 1 0 0 0 0 18 1 1614.7598 H7C1H8;P00519;P00519-2 H7C1H8 672 689 ABL1 Tyrosine-protein kinase ABL1 yes no 3 0.013373 40.693 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 3012900 420870 623840 967600 0 185970 814610 387 666 391 1802;1803;1804;1805;1806 1219 1219 1 AGSISSEEVDGSQGNMMR TSAGTEIRAGSISSEE GSQGNMMRMGPKKETE R A G M R M 1 1 1 1 0 1 2 3 0 1 0 0 2 0 0 4 0 0 0 1 0 18 0 1853.7884 Q8NFC6 Q8NFC6 1699 1716 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 0.026855 36.637 By matching By MS/MS By matching By matching By matching By matching 1 1 2017400 0 1054300 0 0 0 963140 388 1325 392 1807;1808 1220 1220 1 AGSPDVLRCSSQGHRK KQAENGERAGSPDVLR CSSQGHRKDSDKSRSR R A G R K D 1 2 0 1 1 1 0 2 1 0 1 1 0 0 1 3 0 0 0 1 0 16 2 1753.8642 Q8NDX6 Q8NDX6 42 57 ZNF740 Zinc finger protein 740 yes yes 4 0.0051774 48.527 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 9999700 0 2538500 2932500 1313300 1356600 1858800 389 1320 393 1809;1810;1811;1812;1813 1221;1222 1221 2 AGSQLGPGYQHHAQPK CSVAVEMRAGSQLGPG YQHHAQPKRKKP____ R A G P K R 2 0 0 0 0 3 0 3 2 0 1 1 0 0 2 1 0 0 1 0 0 16 0 1674.8227 Q02241-2;H7BYN4;Q02241;B4E1K0 Q02241-2 837 852 KIF23 Kinesin-like protein KIF23 yes no 3;4 4.2259E-18 102.52 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 2 2 28227000 2420900 3329300 4848500 2213500 4851400 10563000 390 660 394 1814;1815;1816;1817;1818;1819;1820;1821;1822;1823;1824 1223;1224;1225;1226;1227;1228;1229;1230;1231 1223 9 AGSSWQCDTCLLQNK IGFGESLKAGSSWQCD DTCLLQNKVTDNKCIA K A G N K V 1 0 1 1 2 2 0 1 0 0 2 1 0 0 0 2 1 1 0 0 0 15 0 1766.7716 P49790;F6QR24;Q4LE47 P49790 658 672 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 2 1.5504E-124 149.3 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 34404000 0 25565000 0 2077200 0 6761500 391 531 395 1825;1826;1827 1232;1233;1234;1235 1235 4 AGSSWQCDTCLLQNKVTDNK IGFGESLKAGSSWQCD QNKVTDNKCIACQAAK K A G N K C 1 0 2 2 2 2 0 1 0 0 2 2 0 0 0 2 2 1 0 1 0 20 1 2324.0525 P49790;F6QR24;Q4LE47 P49790 658 677 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 3 0.016257 38.696 By matching By matching By matching By matching By MS/MS By matching 1 1309400 0 0 0 0 1309400 0 392 531 396 1828 1236 1236 1 AGSTSWTGFQTK VPPEQKRKAGSTSWTG SWTGFQTKAEVEQVEL K A G T K A 1 0 0 0 0 1 0 2 0 0 0 1 0 1 0 2 3 1 0 0 0 12 0 1269.599 E9PDD9;Q9NW13 E9PDD9 501 512 RBM28 RNA-binding protein 28 yes no 2 0.0039606 66.708 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 8180500 733480 0 1587700 1845800 1320700 2692800 393 422 397 1829;1830;1831;1832;1833 1237;1238;1239;1240 1239 4 AGTCCANCQTTTTTLWR RRLSAARRAGTCCANC TTTTTLWRRNANGDPV R A G W R R 2 1 1 0 3 1 0 1 0 0 1 0 0 0 0 0 6 1 0 0 0 17 0 2000.8503 P23769 P23769 345 361 GATA2 Endothelial transcription factor GATA-2 yes yes 2 0.0039082 49.395 By matching By matching By matching By matching By matching By MS/MS 1 1 895950 0 356700 0 0 0 539250 394 869 398 1834;1835 1241 1241 1 AGTCCANCQTTTTTLWRR RRLSAARRAGTCCANC TTTTLWRRNANGDPVC R A G R R N 2 2 1 0 3 1 0 1 0 0 1 0 0 0 0 0 6 1 0 0 0 18 1 2156.9514 P23769 P23769 345 362 GATA2 Endothelial transcription factor GATA-2 yes yes 3 0.018702 34.851 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 4565900 886050 1158600 1546700 0 0 974570 395 869 399 1836;1837;1838;1839 1242 1242 1 AGTGVDNVDLEAATRK EKLQVVGRAGTGVDNV DLEAATRKGILVMNTP R A G R K G 3 1 1 2 0 0 1 2 0 0 1 1 0 0 0 0 2 0 0 2 0 16 1 1615.8166 O43175;Q5SZU1 O43175 76 91 PHGDH D-3-phosphoglycerate dehydrogenase yes no 3 0.00012775 71.354 By matching By matching By matching By matching By matching By MS/MS 1 4031800 0 0 0 0 0 4031800 396 711 400 1840 1243 1243 1 AGVIGLTQTAAR QTNYAASKAGVIGLTQ GLTQTAARELGRHGIR K A G A R E 3 1 0 0 0 1 0 2 0 1 1 0 0 0 0 0 2 0 0 1 0 12 0 1156.6564 Q92506 Q92506 174 185 HSD17B8 Estradiol 17-beta-dehydrogenase 8 yes yes 2 0.0040963 65.842 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1731300 282240 192540 0 323560 0 932950 397 1349 401 1841;1842;1843;1844 1244 1244 1 AGVNTVTTLVENKK TKRPPVLRAGVNTVTT TTLVENKKAQLVVIAH R A G K K A 1 0 2 0 0 0 1 1 0 0 1 2 0 0 0 0 3 0 0 3 0 14 1 1472.8199 P62424;Q5T8U2;Q5T8U3 P62424 138 151 RPL7A 60S ribosomal protein L7a yes no 3 0.023188 38.376 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 3724800 1105100 675290 383270 0 0 1561100 398 991 402 1845;1846;1847;1848 1245;1246 1246 2 AGVPGVAAPGAPAAAPPAK RAPADPGKAGVPGVAA PAAAPPAKEIPEVLVD K A G A K E 8 0 0 0 0 0 0 3 0 0 0 1 0 0 5 0 0 0 0 2 0 19 0 1568.8675 P53350;I3L387;Q58A51 P53350 20 38 PLK1;Plk-1 delta Serine/threonine-protein kinase PLK1 yes no 2;3 0.00061653 76.574 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 2 67966000 0 12928000 9246400 4708200 13667000 27416000 399 962 403 1849;1850;1851;1852;1853;1854;1855;1856;1857;1858 1247;1248;1249;1250;1251;1252 1249 6 AGVPLPPNLKPAPPPTIEEK NAAAMCAKAGVPLPPN PPPTIEEKVAKKSGGA K A G E K V 2 0 1 0 0 0 2 1 0 1 2 2 0 0 7 0 1 0 0 1 0 20 1 2064.1619 P18583-2;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-6;H7C2G8;H7C1M2 P18583-2 1754 1773 SON Protein SON yes no 3 0.0001346 67.252 By matching By MS/MS By matching By matching By matching By matching 1 7037900 0 7037900 0 0 0 0 400 854 404 1859 1253 1253 1 AGVQADEDEDGDEKDEK EEPDREARAGVQADED DGDEKDEKKHRSQPKD R A G E K K 2 0 0 5 0 1 4 2 0 0 0 2 0 0 0 0 0 0 0 1 0 17 1 1848.7497 F5GX68 F5GX68 268 284 DNMT1 Cytosine-specific methyltransferase no no 3 0.0017864 57.703 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 7177100 623260 0 2607000 927400 789850 2229600 401 487 405 1860;1861;1862;1863;1864 1254;1255;1256;1257 1255 4 AGVQSGTNALLVVK RLSKRRAKAGVQSGTN TNALLVVKHRDMNEKE K A G V K H 2 0 1 0 0 1 0 2 0 0 2 1 0 0 0 1 1 0 0 3 0 14 0 1355.7773 F8W9Q2;Q8N7H5-2;Q8N7H5 F8W9Q2 306 319 PAF1 RNA polymerase II-associated factor 1 homolog yes no 2 0.027511 51.726 By matching By matching By matching By matching By matching By MS/MS 1 1965900 0 0 0 0 0 1965900 402 564 406 1865 1258 1258 0 AGVRPSSSGSAWEACSEAPSK TIKQESGRAGVRPSSS ACSEAPSKGSQDGVTW R A G S K G 4 1 0 0 1 0 2 2 0 0 0 1 0 0 2 6 0 1 0 1 0 21 1 2119.9593 Q12789-3;Q12789;H7BYG6 Q12789-3 839 859 GTF3C1 General transcription factor 3C polypeptide 1 yes no 3 9.3217E-33 101.62 By matching By matching By matching By matching By matching By MS/MS 1 1 1707900 0 0 0 0 342670 1365200 403 1059 407 1866;1867 1259;1260 1260 2 AGVSVKPFQVK EVVKKKNKAGVSVKPF SVKPFQVKNHIWVFIN K A G V K N 1 0 0 0 0 1 0 1 0 0 0 2 0 1 1 1 0 0 0 3 0 11 1 1158.6761 Q02880-2;Q02880;E9PCY5 Q02880-2 363 373 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 2 3.3076E-05 105.4 By matching By matching By matching By matching By matching By MS/MS 1 1 5926000 0 0 1899600 0 0 4026400 404 1035 408 1868;1869 1261 1261 1 AGVVNGTGAPGQSPGAGR QISVNNVKAGVVNGTG GQSPGAGRACESCYTT K A G G R A 3 1 1 0 0 1 0 6 0 0 0 0 0 0 2 1 1 0 0 2 0 18 0 1551.7754 Q13330;Q13330-3;E7ESY4;E7EN71;H0Y4T7;Q13330-2 Q13330 374 391 MTA1 Metastasis-associated protein MTA1 yes no 2 0.0080565 43.794 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 8160700 0 2115700 1629600 0 0 4415400 405 1078 409 1870;1871;1872 1262;1263;1264 1262 3 AGYSQGATQYTQAQQTR TYYQTAPKAGYSQGAT YTQAQQTRQVTAIKPA K A G T R Q 3 1 0 0 0 5 0 2 0 0 0 0 0 0 0 1 3 0 2 0 0 17 0 1857.8606 Q96KR1;B5MEH6 Q96KR1 192 208 ZFR Zinc finger RNA-binding protein yes no 2;3 0.0013492 77.795 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 3 3 160590000 24008000 24036000 19303000 12720000 28533000 51986000 406 1403 410 1873;1874;1875;1876;1877;1878;1879;1880;1881;1882;1883;1884;1885;1886;1887 1265;1266;1267;1268;1269;1270;1271;1272;1273;1274;1275;1276 1273 12 AGYSTDESSSSSLHATR RGSGGSDKAGYSTDES SSSLHATRTYGGSYGG K A G T R T 2 1 0 1 0 0 1 1 1 0 1 0 0 0 0 6 2 0 1 0 0 17 0 1754.7707 P51116 P51116 407 423 FXR2 Fragile X mental retardation syndrome-related protein 2 yes yes 3 0.00047268 82.59 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2237800 0 0 501830 0 473790 1262200 407 950 411 1888;1889;1890 1277 1277 1 AHAYGDPNAGLNSQLHYK SAYHANTRAHAYGDPN LNSQLHYKRQMYQQQP R A H Y K R 3 0 2 1 0 1 0 2 2 0 2 1 0 0 1 1 0 0 2 0 0 18 0 1954.9286 Q9UGU0-2;Q9UGU0 Q9UGU0-2 1069 1086 TCF20 Transcription factor 20 yes no 3 0.00084057 68.576 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4436100 0 1352700 615400 395620 0 2072400 408 1591 412 1891;1892;1893;1894 1278 1278 1 AHLHAQAKPYENISLCQAK HGDKREAKAHLHAQAK NISLCQAKLDIAFGTH K A H A K L 4 0 1 0 1 2 1 0 2 1 2 2 0 0 1 1 0 0 1 0 0 19 1 2178.1004 G3V2F4;E7EPD8;Q9NUW8;G3V2J6;G3V2U6;Q9BRS7 G3V2F4 236 254 TDP1 Tyrosyl-DNA phosphodiesterase 1 yes no 3;4 0.00045864 79.326 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2 1 2 34013000 0 3736800 6877100 3944300 6216600 13239000 409 357 413 1895;1896;1897;1898;1899;1900;1901 1279;1280;1281 1279 2 AHLRGLGGLAS EEEEVDSKAHLRGLGG RGLGGLAS________ K A H A S - 2 1 0 0 0 0 0 3 1 0 3 0 0 0 0 1 0 0 0 0 0 11 1 1050.5934 Q8NAF0 Q8NAF0 552 562 ZNF579 Zinc finger protein 579 yes yes 2 0.010299 79.489 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 7941800 0 1264800 1043200 896080 1152900 3584800 410 1313 414 1902;1903;1904;1905;1906 1282;1283 1282 2 AHLRHLGVSDPDAK KGLSSHARAHLRHLGV GVSDPDAKGSPIDVLH R A H A K G 2 1 0 2 0 0 0 1 2 0 2 1 0 0 1 1 0 0 0 1 0 14 1 1514.7954 B7ZM82 B7ZM82 245 258 WIZ yes yes 3 0.0011287 72.705 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 5934300 802010 0 0 0 2443500 2688800 411 212 415 1907;1908;1909 1284;1285;1286 1284 3 AHNAGAAAAAGTHSAK ________________ AAGTHSAKSGGSEAAL M A H A K S 8 0 1 0 0 0 0 2 2 0 0 1 0 0 0 1 1 0 0 0 0 16 0 1404.6858 Q8NFD5;Q8NFD5-2;Q8NFD5-3 Q8NFD5 2 17 ARID1B AT-rich interactive domain-containing protein 1B yes no 2;3 0.0006276 67.415 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 2 2 1 5088400 1046400 351860 0 1352000 1498600 839570 412 1326 416 1910;1911;1912;1913;1914;1915;1916 1287;1288;1289;1290;1291;1292 1289 6 AHNLNVHMSMVHPLTQTQDK QCGRRFEKAHNLNVHM PLTQTQDKALPLEAEP K A H D K A 1 0 2 1 0 2 0 0 3 0 2 1 2 0 1 1 2 0 0 2 0 20 0 2300.1154 Q8N554-2;Q8N554;A8K186 Q8N554-2 491 510 ZNF276 Zinc finger protein 276 yes no 4 0.00020999 62.589 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 4935000 0 554100 1579200 363850 792810 1645000 413 1300 417 1917;1918;1919;1920;1921 1293;1294;1295 1295 3 AHPSRRVTLNTLQAWSK QPSSQNTKAHPSRRVT NTLQAWSKTTPRRINL K A H S K T 2 2 1 0 0 1 0 0 1 0 2 1 0 0 1 2 2 1 0 1 0 17 2 1964.0704 Q13112 Q13112 478 494 CHAF1B Chromatin assembly factor 1 subunit B yes yes 4 0.010217 42.242 By MS/MS By matching By matching By matching By matching By matching 1 1214900 1214900 0 0 0 0 0 414 1069 418 1922 1296 1296 1 AHQETFPSLCQLGK ELITKVSKAHQETFPS PSLCQLGKYTTNSSAD K A H G K Y 1 0 0 0 1 2 1 1 1 0 2 1 0 1 1 1 1 0 0 0 0 14 0 1614.7824 D6RBI3;B4DSI3;P10826-2;P10826;P10826-3;B7Z4F1;P13631-2;P13631 P13631-2 185 198 RARB;RARG Retinoic acid receptor beta;Retinoic acid receptor gamma no no 3 0.0028863 59.294 By matching By MS/MS By matching By matching By matching By matching 1 4892800 0 4892800 0 0 0 0 415 832;122 419 1923 1297 1297 1 AHQNLSHIPLAQQQLMK PAFLHLNKAHQNLSHI LAQQQLMKFENIHTNN K A H M K F 2 0 1 0 0 4 0 0 2 1 3 1 1 0 1 1 0 0 0 0 0 17 0 1956.0363 Q9HCJ3-2;E9PE10 Q9HCJ3-2 395 411 RAVER2 Ribonucleoprotein PTB-binding 2 yes no 4 0.0028257 50.305 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4146000 0 584980 0 299810 1811200 1449900 416 1522 420 1924;1925;1926;1927 1298 1298 1 AHQTGETVTGSGTQTQAGATQTVEQDSSHQTGR PQTREQDRAHQTGETV DSSHQTGRTSKQTQEA R A H G R T 3 1 0 1 0 6 2 5 2 0 0 0 0 0 0 3 8 0 0 2 0 33 0 3355.5261 Q9UBG3 Q9UBG3 220 252 CRNN Cornulin yes yes 3 3.6833E-14 52.814 By matching By matching By matching By matching By MS/MS By matching 1 0 0 0 0 0 0 0 417 1582 421 1928 1299 1299 1 AHYIEAEKLR KLQQLWLKAHYIEAEK YIEAEKLRGRPLGAVG K A H L R G 2 1 0 0 0 0 2 0 1 1 1 1 0 0 0 0 0 0 1 0 0 10 1 1228.6564 Q9NPC8 Q9NPC8 90 99 SIX2 Homeobox protein SIX2 yes yes 2;3 7.1736E-09 114.4 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 2 18090000 539950 1698200 2767400 790890 2852200 9441300 418 1525 422 1929;1930;1931;1932;1933;1934;1935 1300;1301;1302;1303;1304;1305 1300 6 AHYVEAEKLR KLQQLWLKAHYVEAEK YVEAEKLRGRPLGAVG K A H L R G 2 1 0 0 0 0 2 0 1 0 1 1 0 0 0 0 0 0 1 1 0 10 1 1214.6408 Q15475 Q15475 90 99 SIX1 Homeobox protein SIX1 yes yes 3 0.0029118 95.523 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 10525000 841230 653540 934510 990720 2165300 4940200 419 1139 423 1936;1937;1938;1939;1940;1941 1306;1307;1308;1309 1307 4 AIAALISEK QINTRDAKAIAALISE IAALISEKLETLRNQG K A I E K L 3 0 0 0 0 0 1 0 0 2 1 1 0 0 0 1 0 0 0 0 0 9 0 914.54368 Q8IXB1;Q8IXB1-2;F8W884 Q8IXB1 770 778 DNAJC10 DnaJ homolog subfamily C member 10 yes no 1;2 0.0059535 104.2 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 3 1 271070000 0 58693000 24625000 18495000 26982000 142280000 420 1287 424 1942;1943;1944;1945;1946;1947;1948;1949;1950 1310;1311;1312;1313;1314;1315;1316 1313 7 AIACLLFGGSRK FGGTDMKKAIACLLFG LLFGGSRKRLPDGLTR K A I R K R 2 1 0 0 1 0 0 2 0 1 2 1 0 1 0 1 0 0 0 0 0 12 1 1291.7071 P33992;B1AHB1;E7EQY5 P33992 352 363 MCM5 DNA replication licensing factor MCM5 yes no 3 0.0026825 64.224 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 50952000 0 13330000 0 2203100 0 35419000 421 892 425 1951;1952;1953 1317;1318;1319 1318 3 AIAESLNSCRPSDASATR EEEELLRKAIAESLNS PSDASATRSRPLATGP K A I T R S 4 2 1 1 1 0 1 0 0 1 1 0 0 0 1 4 1 0 0 0 0 18 1 1904.901 Q96RL1;F8VQY2;Q96RL1-3;F2Z2T8;Q96RL1-2;D6RC40;D6RCQ3 Q96RL1 113 130 UIMC1 BRCA1-A complex subunit RAP80 yes no 3 0.0032695 50.305 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 21626000 3730800 5398800 5302500 3132300 4061200 0 422 535 426 1954;1955;1956;1957;1958 1320;1321;1322 1322 3 AIEAAPQEPEQK QTHPEAQRAIEAAPQE APQEPEQKRSRQDPGT R A I Q K R 3 0 0 0 0 2 3 0 0 1 0 1 0 0 2 0 0 0 0 0 0 12 0 1309.6514 Q96CP2;I3L1Y9 Q96CP2 90 101 FLYWCH2 FLYWCH family member 2 yes no 2 1.672E-26 120.55 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 142220000 21781000 18735000 16553000 10132000 30302000 44720000 423 683 427 1959;1960;1961;1962;1963;1964;1965 1323;1324;1325;1326;1327;1328;1329 1324 7 AIEAAPQEPEQKR QTHPEAQRAIEAAPQE PQEPEQKRSRQDPGTD R A I K R S 3 1 0 0 0 2 3 0 0 1 0 1 0 0 2 0 0 0 0 0 0 13 1 1465.7525 Q96CP2;I3L1Y9 Q96CP2 90 102 FLYWCH2 FLYWCH family member 2 yes no 3 0.00093755 85.522 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 5174500 0 740990 693730 433600 1111700 2194500 424 683 428 1966;1967;1968;1969;1970 1330;1331 1330 2 AIEDEGGNPDEIEITSEGNK VLMERLKKAIEDEGGN EITSEGNKKTSKRSSK K A I N K K 1 0 2 2 0 0 5 3 0 3 0 1 0 0 1 1 1 0 0 0 0 20 0 2115.9444 Q15424;F5H1L1;F5H0H3;B7Z959 Q15424 64 83 SAFB Scaffold attachment factor B1 yes no 2 0.00016186 74.776 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 12506000 5468800 1919000 2888100 0 656010 1573700 425 1137 429 1971;1972;1973;1974;1975 1332;1333;1334;1335;1336 1332 5 AIEDEGGNPDEIEITSEGNKK VLMERLKKAIEDEGGN ITSEGNKKTSKRSSKG K A I K K T 1 0 2 2 0 0 5 3 0 3 0 2 0 0 1 1 1 0 0 0 0 21 1 2244.0394 Q15424;F5H1L1;F5H0H3;B7Z959 Q15424 64 84 SAFB Scaffold attachment factor B1 yes no 3 6.4402E-06 63.46 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 25526000 4923000 5244500 2594500 2717900 4797500 5248300 426 1137 430 1976;1977;1978;1979;1980;1981 1337;1338;1339;1340;1341 1338 5 AIEELLKEAK EDQELERKAIEELLKE EELLKEAKRGKTRAET K A I A K R 2 0 0 0 0 0 3 0 0 1 2 2 0 0 0 0 0 0 0 0 0 10 1 1142.6547 Q9Y2S0-2 Q9Y2S0-2 11 20 POLR1D DNA-directed RNA polymerases I and III subunit RPAC2 yes yes 2 0 203.02 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 97490000 8024200 11704000 19882000 2333600 1547400 53999000 427 1637 431 1982;1983;1984;1985;1986;1987 1342;1343;1344;1345 1342 4 AIEEQMVAAK LFNEVQEKAIEEQMVA EEQMVAAKDVVMEPTM K A I A K D 3 0 0 0 0 1 2 0 0 1 0 1 1 0 0 0 0 0 0 1 0 10 0 1088.5536 Q9H0A0;E7ESU4;E9PMN9 Q9H0A0 913 922 NAT10 N-acetyltransferase 10 yes no 2 0.0049765 87.258 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 4851000 1169000 0 0 0 1651600 2030400 428 1477 432 1988;1989;1990 1346;1347;1348;1349 1348 4 AIEIVESDVK KALDVCRRAIEIVESD EIVESDVKSQTILKPL R A I V K S 1 0 0 1 0 0 2 0 0 2 0 1 0 0 0 1 0 0 0 2 0 10 0 1101.5918 Q99741 Q99741 397 406 CDC6 Cell division control protein 6 homolog yes yes 2 0.0026885 99.568 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 8999900 0 1686500 1849200 0 0 5464300 429 1431 433 1991;1992;1993 1350;1351;1352 1352 3 AIENCEYAFNLKK LHSHHELKAIENCEYA EYAFNLKKDEVCVNPY K A I K K D 2 0 2 0 1 0 2 0 0 1 1 2 0 1 0 0 0 0 1 0 0 13 1 1598.7763 Q15796-2;Q15796 Q15796-2 115 127 SMAD2 Mothers against decapentaplegic homolog 2 yes no 3 0.00059769 77.597 By matching By matching By matching By matching By matching By MS/MS 1 1 4524000 1284000 0 0 0 0 3240000 430 1148 434 1994;1995 1353 1353 1 AIENSARDAAVQK ALPNKRHKAIENSARD ARDAAVQKIETIIKEQ K A I Q K I 4 1 1 1 0 1 1 0 0 1 0 1 0 0 0 1 0 0 0 1 0 13 1 1371.7106 Q9ULM3 Q9ULM3 29 41 YEATS2 YEATS domain-containing protein 2 yes yes 3 0.023652 46.985 By matching By matching By matching By matching By matching By MS/MS 1 1 1677600 0 0 0 417250 0 1260300 431 1609 435 1996;1997 1354 1354 1 AIETTDIISR IVHSSMTRAIETTDII ETTDIISRHLPGVCKV R A I S R H 1 1 0 1 0 0 1 0 0 3 0 0 0 0 0 1 2 0 0 0 0 10 0 1117.5979 Q96HS1-2;Q96HS1;F5GXG4 Q96HS1-2 153 162 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes no 2 0.025061 59.418 By matching By matching By matching By matching By matching By MS/MS 1 1108000 0 0 0 0 0 1108000 432 1392 436 1998 1355 1355 1 AIGGGLSSVGGGSSTIK GFSSSSGRAIGGGLSS GGGSSTIKYTTTSSSS R A I I K Y 1 0 0 0 0 0 0 6 0 2 1 1 0 0 0 4 1 0 0 1 0 17 0 1446.7678 P02538;CON__P02538;E7EUE8 P02538 534 550 KRT6A Keratin, type II cytoskeletal 6A no no 2 0.0017201 78.228 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 2 34028000 0 6381600 5365400 22281000 0 0 + 433 287 437 1999;2000;2001;2002 1356;1357;1358;1359;1360 1360 5 AIGGGLSSVGGGSSTIKYTTTSSSSRK GFSSSSGRAIGGGLSS TTSSSSRKSYKH____ R A I R K S 1 1 0 0 0 0 0 6 0 2 1 2 0 0 0 8 4 0 1 1 0 27 2 2545.2984 P02538;CON__P02538;E7EUE8 P02538 534 560 KRT6A Keratin, type II cytoskeletal 6A no no 4 0.0032889 36.627 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 7654200 0 0 0 4380900 1110500 2162800 + 434 287 438 2003;2004;2005 1361;1362 1361 2 AIGGSKPRVATPEVVSK ETGSIRPRAIGGSKPR ATPEVVSKIAQYKREC R A I S K I 2 1 0 0 0 0 1 2 0 1 0 2 0 0 2 2 1 0 0 3 0 17 2 1694.9679 P26367;G3V3Q9;P26367-2 P26367 70 86 PAX6 Paired box protein Pax-6 no no 4 0.0036723 48.899 By matching By matching By matching By matching By matching By MS/MS 1 1 2450100 0 671050 0 0 0 1779100 435 877;878 439 2006;2007 1363;1364 1364 2 AIGISEPVKVPYSK LFNTRYAKAIGISEPV PVKVPYSKFLMHPEEL K A I S K F 1 0 0 0 0 0 1 1 0 2 0 2 0 0 2 2 0 0 1 2 0 14 1 1486.8395 Q9UHL9-2;Q9UHL9;E9PFE2;Q9UHL9-3 Q9UHL9-2 580 593 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 yes no 3 1.4186E-20 112.02 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 43301000 8404100 6153500 0 4913200 0 23830000 436 427 440 2008;2009;2010;2011 1365;1366;1367;1368 1365 4 AIGVLTSGGDAQGMNAAVR EHLSGAGKAIGVLTSG QGMNAAVRAVVRMGIY K A I V R A 4 1 1 1 0 1 0 4 0 1 1 0 1 0 0 1 1 0 0 2 0 19 0 1786.8996 Q01813;P17858 Q01813 26 44 PFKP;PFKL 6-phosphofructokinase type C;6-phosphofructokinase, liver type yes no 2 0.00013191 82.121 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 14188000 0 4261100 0 0 0 9926800 437 1031 441 2012;2013 1369;1370 1369 2 AIHERGEAVCPTCNVVTRK GPEEQWQRAIHERGEA TCNVVTRKTLVGLKKH R A I R K T 2 2 1 0 2 0 2 1 1 1 0 1 0 0 1 0 2 0 0 3 0 19 2 2196.0892 Q96KM6 Q96KM6 503 521 ZNF512B Zinc finger protein 512B yes yes 4;5 0.00053305 64.331 By MS/MS By MS/MS By matching By MS/MS By matching By matching 3 3 1 2 2 2 60415000 9817100 11144000 5722300 6653900 10405000 16673000 438 1402 442 2014;2015;2016;2017;2018;2019;2020;2021;2022;2023;2024;2025;2026 1371;1372;1373;1374;1375 1375 5 AIIRENEFSFEDNAIRGGK YVGDKDSRAIIRENEF DNAIRGGKKASRMKKE R A I G K K 2 2 2 1 0 0 3 2 0 3 0 1 0 2 0 1 0 0 0 0 0 19 2 2165.0865 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 788 806 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 6.0973E-08 86.179 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 439 486 443 2027 1376 1376 1 AIKEMGFTNMTEIQHK LVNENTLKAIKEMGFT NMTEIQHKSIRPLLEG K A I H K S 1 0 1 0 0 1 2 1 1 2 0 2 2 1 0 0 2 0 0 0 0 16 1 1876.9175 Q9NVP1 Q9NVP1 193 208 DDX18 ATP-dependent RNA helicase DDX18 yes yes 4 0.0090551 46.121 By matching By matching By matching By matching By MS/MS By matching 1 1 9773900 0 0 2795700 0 6978200 0 440 1550 444 2028;2029 1377 1377 1 AIMEMPSFYSHGLPR RAAPGEFRAIMEMPSF FYSHGLPRCSPYKKLT R A I P R C 1 1 0 0 0 0 1 1 1 1 1 0 2 1 2 2 0 0 1 0 0 15 0 1734.8222 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 475 489 ADAR Double-stranded RNA-specific adenosine deaminase no no 3 0.017723 54.094 By matching By matching By matching By matching By matching By MS/MS 1 7836700 0 0 0 0 0 7836700 441 352;968 445 2030 1378 1378 35 1 AIMYEETTYSK SQNHPDSRAIMYEETT YEETTYSKKKIIDFLS R A I S K K 1 0 0 0 0 0 2 0 0 1 0 1 1 0 0 1 2 0 2 0 0 11 0 1334.6064 P52701;B4DF41;F5H2F9;F5H769;P52701-2 P52701 842 852 MSH6 DNA mismatch repair protein Msh6 yes no 2 0.0023817 87.713 By matching By matching By matching By matching By matching By MS/MS 1 1 7640300 0 0 1142000 0 0 6498300 442 959 446 2031;2032 1379 1379 1 AINGPTSASGDDISK EEHGPSEKAINGPTSA ASGDDISKLQRTPGEE K A I S K L 2 0 1 2 0 0 0 2 0 2 0 1 0 0 1 3 1 0 0 0 0 15 0 1431.6842 P51114-3;B4DXZ6;P51114;H7C4S4 P51114-3 494 508 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 2 0.00049384 70.26 By matching By matching By matching By matching By matching By MS/MS 1 1 1299500 0 174060 0 0 0 1125500 443 140 447 2033;2034 1380 1380 0 AINQQTGAFVEISR GRGGENVKAINQQTGA GAFVEISRQLPPNGDP K A I S R Q 2 1 1 0 0 2 1 1 0 2 0 0 0 1 0 1 1 0 0 1 0 14 0 1532.7947 Q92945-2;Q92945 Q92945-2 449 462 KHSRP Far upstream element-binding protein 2 yes no 2;3 1.241E-260 180.3 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 7 2 5 3 3 1755100000 572690000 138160000 250030000 38824000 69495000 685880000 444 1366 448 2035;2036;2037;2038;2039;2040;2041;2042;2043;2044;2045;2046;2047;2048;2049;2050;2051;2052;2053;2054;2055;2056 1381;1382;1383;1384;1385;1386;1387;1388;1389;1390;1391;1392;1393;1394;1395;1396;1397;1398;1399 1386 17 AINQQTGAFVEISRQLPPNGDPNFK GRGGENVKAINQQTGA PNGDPNFKLFIIRGSP K A I F K L 2 1 3 1 0 3 1 2 0 2 1 1 0 2 3 1 1 0 0 1 0 25 1 2740.3933 Q92945-2;Q92945 Q92945-2 449 473 KHSRP Far upstream element-binding protein 2 yes no 3 2.4459E-162 137.87 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 2 1518500000 373980000 276310000 483130000 208970000 41852000 134310000 445 1366 449 2057;2058;2059;2060;2061;2062;2063;2064 1400;1401;1402;1403;1404;1405;1406 1405 7 AINTLNGLR VTAKDAERAINTLNGL INTLNGLRLQSKTIKV R A I L R L 1 1 2 0 0 0 0 1 0 1 2 0 0 0 0 0 1 0 0 0 0 9 0 970.55598 Q15717;B1AM48;Q12926-2;Q12926;P26378-4;P26378-2;P26378-5;B1APY9;P26378;P26378-3;B1APY8 Q15717 77 85 ELAVL1;ELAVL2;ELAVL4 ELAV-like protein 1;ELAV-like protein 2;ELAV-like protein 4 yes no 2 0.0089047 86.67 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 5726400 197750 2106900 1076300 762260 1583200 0 446 1146 450 2065;2066;2067;2068;2069 1407 1407 1 AINTLNGLRLQSK VTAKDAERAINTLNGL NGLRLQSKTIKVSYAR R A I S K T 1 1 2 0 0 1 0 1 0 1 3 1 0 0 0 1 1 0 0 0 0 13 1 1426.8256 Q15717 Q15717 77 89 ELAVL1 ELAV-like protein 1 yes yes 2;3 0 211.83 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 3 2 134260000 33456000 18876000 28770000 9886100 7079000 36189000 447 1146 451 2070;2071;2072;2073;2074;2075;2076;2077;2078;2079;2080;2081;2082 1408;1409;1410;1411;1412;1413;1414;1415;1416;1417;1418;1419;1420;1421 1412 14 AIPRPDGIEWR MISVREAKAIPRPDGI RPDGIEWRNKYICVEE K A I W R N 1 2 0 1 0 0 1 1 0 2 0 0 0 0 2 0 0 1 0 0 0 11 1 1308.6939 D6RAF2;Q6PIY7-2;Q6PIY7 D6RAF2 373 383 PAPD4 Poly(A) RNA polymerase GLD2 yes no 3 0.0059731 70.942 By matching By matching By matching By matching By matching By MS/MS 1 3328400 0 0 0 0 0 3328400 448 320 452 2083 1422;1423 1423 2 AIPTTGRGSSGVGLTAAVTTDQETGER YVLCTAPRAIPTTGRG TDQETGERRLEAGAMV R A I E R R 3 2 0 1 0 1 2 5 0 1 1 0 0 0 1 2 6 0 0 2 0 27 1 2631.31 P25205 P25205 365 391 MCM3 DNA replication licensing factor MCM3 yes yes 3 0.00077198 43.732 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 8603800 3561700 979860 4062200 0 0 0 449 873 453 2084;2085;2086 1424;1425;1426 1426 3 AIQAVATNPK VNKELKEKAIQAVATN QAVATNPKTTHELKWP K A I P K T 3 0 1 0 0 1 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 10 0 1011.5713 Q68CQ4 Q68CQ4 202 211 DIEXF Digestive organ expansion factor homolog yes yes 2 0.0093219 76.228 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 3897200 859730 745850 0 791270 0 1500300 450 1216 454 2087;2088;2089;2090 1427;1428;1429 1429 3 AIQERLFK PIITPNTKAIQERLFK AIQERLFKQDTSSSTT K A I F K Q 1 1 0 0 0 1 1 0 0 1 1 1 0 1 0 0 0 0 0 0 0 8 1 1003.5815 Q9NQW6;Q9NQW6-2;H7C3S1 Q9NQW6 406 413 ANLN Actin-binding protein anillin yes no 2 0.0099875 109.48 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 7396600 0 0 3055300 1379600 1243200 1718500 451 1533 455 2091;2092;2093;2094 1430;1431;1432 1431 3 AIQINPAFADAHSNLASIHK GALQCYTRAIQINPAF SNLASIHKDSGNIPEA R A I H K D 5 0 2 1 0 1 0 0 2 3 1 1 0 1 1 2 0 0 0 0 0 20 0 2117.1018 O15294;O15294-2;O15294-3;O15294-4 O15294 421 440 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 3;4 8.2504E-05 70.334 By matching By MS/MS By matching By matching By matching By matching 2 21579000 0 21579000 0 0 0 0 452 705 456 2095;2096 1433;1434 1434 2 AIQPQAAQGPAAVQQK QQAVQQQKAIQPQAAQ GPAAVQQKITAQQITT K A I Q K I 5 0 0 0 0 5 0 1 0 1 0 1 0 0 2 0 0 0 0 1 0 16 0 1604.8635 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91 Q96L91-4 2862 2877 EP400 E1A-binding protein p400 yes no 2 0.0037916 52.527 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 12210000 1115200 1699300 1611500 1639500 3432200 2712700 453 1405 457 2097;2098;2099;2100;2101;2102 1435;1436;1437;1438 1436 4 AIQRKPNPLANSNTSGYSESK NEDTGTARAIQRKPNP TSGYSESKKDDARAQL R A I S K K 2 1 3 0 0 1 1 1 0 1 1 2 0 0 2 4 1 0 1 0 0 21 2 2261.14 Q14CA3;Q14669;Q14CF1 Q14CA3 843 863 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 4 6.619E-06 67.644 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 8644500 0 2456200 931070 830010 2200300 2226900 454 1122 458 2103;2104;2105;2106;2107 1439;1440 1440 2 AIRAAQVERYVPEHER PQVEAARKAIRAAQVE RYVPEHERCCWCLCCG K A I E R C 3 3 0 0 0 1 3 0 1 1 0 0 0 0 1 0 0 0 1 2 0 16 2 1923.0075 Q86UT8;E9PJ16;E9PPT8 Q86UT8 47 62 CCDC84 Coiled-coil domain-containing protein 84 yes no 4 0.0040621 51.03 By matching By MS/MS By matching By matching By matching By matching 1 1 2127100 1217900 909200 0 0 0 0 455 1263 459 2108;2109 1441;1442 1441 2 AIRLELQGPRGSPNAR NKREIEGRAIRLELQG PRGSPNARSQPSKTLF R A I A R S 2 3 1 0 0 1 1 2 0 1 2 0 0 0 2 1 0 0 0 0 0 16 2 1733.9649 E7EX81;P19338;H7BY16;Q9BQ02 E7EX81 444 459 NCL Nucleolin yes no 4 0.034675 36.993 By matching By matching By matching By matching By MS/MS By matching 1 1 1 5885200 0 0 0 1008700 2323400 2553200 456 397 460 2110;2111;2112 1443 1443 1 AIRPQIDLK EIFNFVLKAIRPQIDL IRPQIDLKRYAVPSAG K A I L K R 1 1 0 1 0 1 0 0 0 2 1 1 0 0 1 0 0 0 0 0 0 9 1 1052.6342 P78527;E7EUY0;P78527-2 P78527 255 263 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.0268 101.46 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 13572000 0 1209400 710450 886050 3827600 6938700 457 1012 461 2113;2114;2115;2116;2117 1444 1444 1 AITFFTEDDKPLLR GRAGNKGKAITFFTED EDDKPLLRSVANVIQQ K A I L R S 1 1 0 2 0 0 1 0 0 1 2 1 0 2 1 0 2 0 0 0 0 14 1 1664.8774 Q9Y2R4;A8MTP9 Q9Y2R4 512 525 DDX52 Probable ATP-dependent RNA helicase DDX52 yes no 3 0.0012599 79.089 By matching By matching By matching By matching By MS/MS By matching 1 186090000 0 0 0 0 186090000 0 458 1635 462 2118 1445 1445 1 AITGRIPESLRNCVNK AAATEIRRAITGRIPE SLRNCVNKEFFVTSAP R A I N K E 1 2 2 0 1 0 1 1 0 2 1 1 0 0 1 1 1 0 0 1 0 16 2 1826.9785 P56545;Q5SQP8;P56545-2 P56545 344 359 CTBP2 C-terminal-binding protein 2 yes no 3 0.014197 51.009 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 11114000 1316300 2770600 3048700 0 0 3977900 459 973 463 2119;2120;2121;2122 1446 1446 1 AITHLNNNFMFGQK ADGYAVDRAITHLNNN NNFMFGQKLNVCVSKQ R A I Q K L 1 0 3 0 0 1 0 1 1 1 1 1 1 2 0 0 1 0 0 0 0 14 0 1633.8035 P14866;A6NIT8 P14866 435 448 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 2;3 2.4502E-200 172.58 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 1 3 1 515630000 105120000 121250000 67145000 31615000 68834000 121660000 460 838 464;465 2123;2124;2125;2126;2127;2128;2129;2130;2131;2132;2133;2134 1447;1448;1449;1450;1451;1452;1453;1454;1455;1456;1457 1454 84 11 AITIAGVPQSVTECVK MLPNSTERAITIAGVP QSVTECVKQICLVMLE R A I V K Q 2 0 0 0 1 1 1 1 0 2 0 1 0 0 1 1 2 0 0 3 0 16 0 1671.8866 Q15365 Q15365 145 160 PCBP1 Poly(rC)-binding protein 1 yes yes 2 1.1813E-26 108.66 By matching By MS/MS By matching By matching By matching By matching 1 49446000 0 49446000 0 0 0 0 461 1135 466 2135 1458 1458 1 AITIAGVPQSVTECVKQICLVMLETLSQSPQGR MLPNSTERAITIAGVP LSQSPQGRVMTIPYQP R A I G R V 2 1 0 0 2 4 2 2 0 3 3 1 1 0 2 3 3 0 0 4 0 33 1 3612.8678 Q15365 Q15365 145 177 PCBP1 Poly(rC)-binding protein 1 yes yes 3 8.856E-12 53.665 By matching By MS/MS By matching By matching By matching By matching 1 181170000 0 181170000 0 0 0 0 462 1135 467 2136 1459 1459 1 AIVAESLNNTSIK TRSKSSLKAIVAESLN SLNNTSIKGFYSNGAA K A I I K G 2 0 2 0 0 0 1 0 0 2 1 1 0 0 0 2 1 0 0 1 0 13 0 1358.7405 P35251-2;P35251;H0Y8U4 P35251-2 687 699 RFC1 Replication factor C subunit 1 yes no 2 0.0022322 67.952 By matching By matching By matching By matching By matching By MS/MS 1 1 3350700 0 706720 0 0 0 2643900 463 896 468 2137;2138 1460 1460 1 AIVFSGCGR SMAQPATRAIVFSGCG IVFSGCGRATTKTVTC R A I G R A 1 1 0 0 1 0 0 2 0 1 0 0 0 1 0 1 0 0 0 1 0 9 0 965.47529 Q9BUL9 Q9BUL9 64 72 RPP25 Ribonuclease P protein subunit p25 yes yes 2 0.022914 68.224 By matching By MS/MS By matching By matching By matching By matching 1 1 2579600 0 936430 0 0 0 1643200 464 1450 469 2139;2140 1461 1461 1 AIVIDPKNPLCK KALDTLNKAIVIDPKN DPKNPLCKFHRASVLF K A I C K F 1 0 1 1 1 0 0 0 0 2 1 2 0 0 2 0 0 0 0 1 0 12 1 1366.7643 B4DL80;G5EA36;P30260;G3V1C4;I3L394 B4DL80 634 645 CDC27 Cell division cycle protein 27 homolog yes no 3 3.0936E-13 112.85 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 13326000 0 5749000 0 766320 0 6811000 465 95 470 2141;2142;2143 1462;1463;1464 1463 3 AIVSGGGGTIVAQPVQTLTK VVTQGVAKAIVSGGGG QPVQTLTKAQVTAAGP K A I T K A 2 0 0 0 0 2 0 4 0 2 1 1 0 0 1 1 3 0 0 3 0 20 0 1896.068 Q9ULM3 Q9ULM3 700 719 YEATS2 YEATS domain-containing protein 2 yes yes 2 1.2433E-26 101.17 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 20390000 0 15244000 0 5145600 0 0 466 1609 471 2144;2145 1465;1466 1465 2 AKEEEGVPDEEGWVK KIAEEEAKAKEEEGVP PDEEGWVKVTRRGRRP K A K V K V 1 0 0 1 0 0 5 2 0 0 0 2 0 0 1 0 0 1 0 2 0 15 1 1700.7893 Q9Y3A4;Q9NSQ0 Q9Y3A4 191 205 RRP7A;RRP7B Ribosomal RNA-processing protein 7 homolog A;Putative ribosomal RNA-processing protein 7 homolog B yes no 2;3 0.00059568 73.415 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 2 2 2 3 79424000 8726700 13766000 12138000 9167000 4739500 30887000 467 1643 472 2146;2147;2148;2149;2150;2151;2152;2153;2154;2155;2156;2157;2158 1467;1468;1469;1470;1471;1472;1473;1474 1470 8 AKEEEGVPDEEGWVKVTR KIAEEEAKAKEEEGVP EGWVKVTRRGRRPVLP K A K T R R 1 1 0 1 0 0 5 2 0 0 0 2 0 0 1 0 1 1 0 3 0 18 2 2057.0065 Q9Y3A4;Q9NSQ0 Q9Y3A4 191 208 RRP7A;RRP7B Ribosomal RNA-processing protein 7 homolog A;Putative ribosomal RNA-processing protein 7 homolog B yes no 3;4 0.00018202 86.213 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 1 2 27147000 6283700 5684200 5419700 2715400 1005400 6038600 468 1643 473 2159;2160;2161;2162;2163;2164;2165;2166;2167 1475;1476;1477;1478;1479;1480;1481 1481 6 AKEELAELKQLAAR A K A R 4 1 0 0 0 1 3 0 0 0 3 2 0 0 0 0 0 0 0 0 0 14 2 1568.8886 REV__Q14980-2 yes no 3 0.0038352 78.985 By MS/MS By matching By matching By matching By matching By matching 1 52021000 52021000 0 0 0 0 0 + 469 1678 474 2168 1482 1482 1 AKGVWSTLPVNEK HENVSLAKAKGVWSTL STLPVNEKKLNLAFRS K A K E K K 1 0 1 0 0 0 1 1 0 0 1 2 0 0 1 1 1 1 0 2 0 13 1 1427.7773 Q96MU7-2;Q96MU7 Q96MU7-2 355 367 YTHDC1 YTH domain-containing protein 1 yes no 3 4.2342E-09 102.73 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 9406000 5175500 0 4230600 0 0 0 470 1407 475 2169;2170 1483;1484 1483 2 AKLVILANNCPALR LKMIRQGKAKLVILAN ANNCPALRKSEIEYYA K A K L R K 3 1 2 0 1 0 0 0 0 1 3 1 0 0 1 0 0 0 0 1 0 14 1 1551.8919 E5RI99;P62888;E5RJH3 E5RI99 43 56 RPL30 60S ribosomal protein L30 yes no 2;3 3.491E-124 152.4 By MS/MS By matching By matching By MS/MS By matching By matching 2 1 136440000 112210000 0 0 24233000 0 0 471 342 476 2171;2172;2173 1485;1486;1487 1486 3 AKLVILANNCPALRK LKMIRQGKAKLVILAN NNCPALRKSEIEYYAM K A K R K S 3 1 2 0 1 0 0 0 0 1 3 2 0 0 1 0 0 0 0 1 0 15 2 1679.9869 E5RI99;P62888 E5RI99 43 57 RPL30 60S ribosomal protein L30 yes no 2;3;4 0 199.8 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 7 3 2 2 7 2 2275600000 1030400000 124150000 253020000 644950000 62161000 160940000 472 342 477 2174;2175;2176;2177;2178;2179;2180;2181;2182;2183;2184;2185;2186;2187;2188;2189;2190;2191;2192;2193;2194;2195;2196 1488;1489;1490;1491;1492;1493;1494;1495;1496;1497;1498;1499;1500;1501;1502;1503;1504;1505;1506;1507;1508;1509;1510;1511 1509 24 AKPVGSPLFKFSDK NEALMECKAKPVGSPL PLFKFSDKEEHEQNDS K A K D K E 1 0 0 1 0 0 0 1 0 0 1 3 0 2 2 2 0 0 0 1 0 14 2 1519.8399 Q92576-2;Q92576;E7EVH3;E9PE34;B3KP41;D6R9X2 Q92576-2 190 203 PHF3 PHD finger protein 3 yes no 3 0.017238 64.798 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 5677900 3069200 1550200 0 0 0 1058500 473 1353 478 2197;2198;2199 1512;1513 1513 1 AKQDPSYYLK IIDPDEEKAKQDPSYY QDPSYYLKNTNAETRE K A K L K N 1 0 0 1 0 1 0 0 0 0 1 2 0 0 1 1 0 0 2 0 0 10 1 1211.6186 Q13356;Q13356-2;E7EW80 Q13356 189 198 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes no 2;3 0.0081352 91.469 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 2 2 2 15891000 834490 1942200 1264800 1061000 4019500 6769200 474 1079 479 2200;2201;2202;2203;2204;2205;2206;2207;2208 1514;1515;1516 1514 3 ALAAADRLQK CLGGGKPKALAAADRL AAADRLQKIFPGVNAR K A L Q K I 4 1 0 1 0 1 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 10 1 1055.6087 E9PB95;O95352-2;O95352 E9PB95 375 384 ATG7 Ubiquitin-like modifier-activating enzyme ATG7 yes no 2 0.0080997 91.658 By matching By matching By matching By matching By matching By MS/MS 1 1 933220 0 0 509760 0 0 423460 475 404 480 2209;2210 1517 1517 1 ALAAAGYDVEK VSLAALKKALAAAGYD AAGYDVEKNNSRIKLG K A L E K N 4 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 0 0 1 1 0 11 0 1106.5608 P16403;Q02539;P22492;P10412;P16402 P10412 65 75 HIST1H1C;HIST1H1A;HIST1H1T;HIST1H1E;HIST1H1D Histone H1.2;Histone H1.1;Histone H1t;Histone H1.4;Histone H1.3 no no 2 0.0035513 81.92 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 64528000 5421400 6114100 2519400 3864300 27803000 18806000 476 818;843 481 2211;2212;2213;2214;2215;2216 1518;1519;1520 1519 3 ALAAAGYDVEKNNSR VSLAALKKALAAAGYD DVEKNNSRIKLGLKSL K A L S R I 4 1 2 1 0 0 1 1 0 0 1 1 0 0 0 1 0 0 1 1 0 15 1 1577.7798 P16403;Q02539;P22492;P10412;P16402 P10412 65 79 HIST1H1C;HIST1H1A;HIST1H1T;HIST1H1E;HIST1H1D Histone H1.2;Histone H1.1;Histone H1t;Histone H1.4;Histone H1.3 no no 2;3 4.3482E-147 155.39 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 3 2 171700000 72321000 11459000 8876000 9568400 46216000 23265000 477 818;843 482 2217;2218;2219;2220;2221;2222;2223;2224;2225;2226;2227;2228;2229;2230;2231 1521;1522;1523;1524;1525;1526;1527;1528;1529;1530;1531;1532;1533 1533 13 ALAAAGYDVEKNNSRIK VSLAALKKALAAAGYD EKNNSRIKLGLKSLVS K A L I K L 4 1 2 1 0 0 1 1 0 1 1 2 0 0 0 1 0 0 1 1 0 17 2 1818.9588 P16403;Q02539;P22492;P10412;P16402 P10412 65 81 HIST1H1C;HIST1H1A;HIST1H1T;HIST1H1E;HIST1H1D Histone H1.2;Histone H1.1;Histone H1t;Histone H1.4;Histone H1.3 no no 3;4 3.8356E-73 129.29 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 114060000 42981000 9712800 11310000 12226000 30836000 6989800 478 818;843 483 2232;2233;2234;2235;2236;2237;2238;2239;2240;2241;2242;2243 1534;1535;1536;1537;1538;1539;1540;1541;1542;1543;1544 1534 11 ALAAGGYDVEK LSLAALKKALAAGGYD AGGYDVEKNNSRIKLG K A L E K N 3 0 0 1 0 0 1 2 0 0 1 1 0 0 0 0 0 0 1 1 0 11 0 1092.5451 P16401 P16401 68 78 HIST1H1B Histone H1.5 yes yes 2 0.0073069 72.289 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 2 2 1 1 1 1 21684000 4083800 4183100 1373100 1242300 4121600 6679800 479 842 484 2244;2245;2246;2247;2248;2249;2250;2251 1545;1546;1547;1548 1548 3 ALAAGGYDVEKNNSR LSLAALKKALAAGGYD DVEKNNSRIKLGLKSL K A L S R I 3 1 2 1 0 0 1 2 0 0 1 1 0 0 0 1 0 0 1 1 0 15 1 1563.7641 P16401 P16401 68 82 HIST1H1B Histone H1.5 yes yes 2;3 0.00046296 72.898 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 1 1 2 2 32527000 8895200 5950800 2693400 1770600 6240200 6976800 480 842 485 2252;2253;2254;2255;2256;2257;2258;2259;2260;2261;2262 1549;1550;1551;1552;1553;1554;1555;1556 1555 8 ALAAGGYDVEKNNSRIK LSLAALKKALAAGGYD EKNNSRIKLGLKSLVS K A L I K L 3 1 2 1 0 0 1 2 0 1 1 2 0 0 0 1 0 0 1 1 0 17 2 1804.9432 P16401 P16401 68 84 HIST1H1B Histone H1.5 yes yes 3 0.0053094 58.079 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 12274000 5297900 2959800 0 2401100 0 1614800 481 842 486 2263;2264;2265;2266 1557;1558 1557 2 ALAAPAAEEK AGAGPKRRALAAPAAE AAPAAEEKEEAREKML R A L E K E 5 0 0 0 0 0 2 0 0 0 1 1 0 0 1 0 0 0 0 0 0 10 0 969.51311 Q01650 Q01650 10 19 SLC7A5 Large neutral amino acids transporter small subunit 1 yes yes 2 0.010473 73.233 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1687600 397170 348350 578690 0 0 363410 482 1028 487 2267;2268;2269;2270 1559 1559 1 ALAAVPSAGSVQRVPSGAAGGK QPLKLDYRALAAVPSA PSGAAGGKMAESPCSP R A L G K M 6 1 0 0 0 1 0 4 0 0 1 1 0 0 2 3 0 0 0 3 0 22 1 1950.0647 Q14160-2;Q14160;Q14160-3;H0YCG0;E7EMI2 Q14160-2 1189 1210 SCRIB Protein scribble homolog yes no 3 0.014378 37.4 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4863000 0 1393500 1083900 0 0 2385600 483 1098 488 2271;2272;2273 1560 1560 1 ALAEAQAQLQESSQK SRRTQDRKALAEAQAQ QLQESSQKLDLLRLAL K A L Q K L 4 0 0 0 0 4 2 0 0 0 2 1 0 0 0 2 0 0 0 0 0 15 0 1600.8057 Q6P5Z2 Q6P5Z2 214 228 PKN3 Serine/threonine-protein kinase N3 yes yes 2 0.00060771 81.327 By matching By matching By matching By matching By matching By MS/MS 1 1 1389000 0 0 0 0 209340 1179700 484 1226 489 2274;2275 1561;1562 1562 2 ALALNCDAPLDDK QTLTNMNRALALNCDA CDAPLDDKIGAESRNW R A L D K I 3 0 1 3 1 0 0 0 0 0 3 1 0 0 1 0 0 0 0 0 0 13 0 1414.6762 Q96PU4 Q96PU4 536 548 UHRF2 E3 ubiquitin-protein ligase UHRF2 yes yes 2 4.153E-09 102.73 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 5394000 0 1701600 0 682370 0 3010000 485 1411 490 2276;2277;2278 1563;1564;1565;1566 1566 4 ALALQLQNQR LRQIEEQKALALQLQN ALQLQNQRLQEREHSV K A L Q R L 2 1 1 0 0 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 10 0 1153.6568 Q9P0U3;Q9P0U3-2 Q9P0U3 365 374 SENP1 Sentrin-specific protease 1 yes no 2 0.0093243 76.221 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2 1 8116800 684900 958970 0 471650 2594700 3406600 486 1573 491 2279;2280;2281;2282;2283;2284 1567;1568 1568 2 ALAQALKEGR RGGLVDEKALAQALKE AQALKEGRIRGAALDV K A L G R I 3 1 0 0 0 1 1 1 0 0 2 1 0 0 0 0 0 0 0 0 0 10 1 1055.6087 P56545;Q5SQP8;P56545-2;H0Y9M9;H0Y8U5;H0Y8W7;Q13363-2;Q13363 P56545 280 289 CTBP2;CTBP1 C-terminal-binding protein 2;C-terminal-binding protein 1 yes no 2 0.028175 72.2 By matching By matching By MS/MS By matching By matching By matching 1 1 1 2669300 0 767630 638960 0 0 1262700 487 973 492 2285;2286;2287 1569 1569 1 ALAQEDQGAGEVER EAIQAQAKALAQEDQG QGAGEVERTSRAVEEK K A L E R T 3 1 0 1 0 2 3 2 0 0 1 0 0 0 0 0 0 0 0 1 0 14 0 1471.6903 O15020-2;O15020 O15020-2 1448 1461 SPTBN2 Spectrin beta chain, non-erythrocytic 2 yes no 2 0.0011065 74.475 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 827500 0 357170 0 0 0 470330 488 702 493 2288;2289 1570;1571;1572 1570 3 ALATHPGISFYEEPR CTQEFLWRALATHPGI ISFYEEPRERPDLQLQ R A L P R E 2 1 0 0 0 0 2 1 1 1 1 0 0 1 2 1 1 0 1 0 0 15 0 1686.8366 Q12789-3;Q12789;H7BYG6 Q12789-3 50 64 GTF3C1 General transcription factor 3C polypeptide 1 yes no 3 1.5631E-08 97.45 By matching By matching By matching By matching By matching By MS/MS 1 11217000 0 0 0 0 0 11217000 489 1059 494 2290 1573 1573 1 ALAVVYGPHEIR YIEQGNTKALAVVYGP VYGPHEIRGSRARALP K A L I R G 2 1 0 0 0 0 1 1 1 1 1 0 0 0 1 0 0 0 1 2 0 12 0 1323.7299 Q9NPD3;E9PPI9 Q9NPD3 48 59 EXOSC4 Exosome complex component RRP41 yes no 3 0.023896 48.115 By matching By matching By MS/MS By matching By matching By matching 1 1 1992900 0 615390 1377500 0 0 0 490 1526 495 2291;2292 1574 1574 1 ALAVVYGPHEIRGSR YIEQGNTKALAVVYGP PHEIRGSRARALPDRA K A L S R A 2 2 0 0 0 0 1 2 1 1 1 0 0 0 1 1 0 0 1 2 0 15 1 1623.8845 Q9NPD3;E9PPI9 Q9NPD3 48 62 EXOSC4 Exosome complex component RRP41 yes no 3;4 0.0024201 66.393 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 3 1 1 1 3 2 59865000 5297700 2763000 5321200 3184100 11129000 32170000 491 1526 496 2293;2294;2295;2296;2297;2298;2299;2300;2301;2302;2303 1575;1576;1577;1578;1579;1580;1581 1577 7 ALCATRQEPLLIGSTK QELNGITRALCATRQE PLLIGSTKSNMGHPEP R A L T K S 2 1 0 0 1 1 1 1 0 1 3 1 0 0 1 1 2 0 0 0 0 16 1 1756.9506 P49327 P49327 311 326 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.01723 41.495 By matching By matching By matching By matching By matching By MS/MS 1 1 2051600 0 351510 0 0 0 1700100 492 934 497 2304;2305 1582 1582 1 ALCHALTFPSLQR ALAGFQQRALCHALTF LTFPSLQRLVYSTCSL R A L Q R L 2 1 0 0 1 1 0 0 1 0 3 0 0 1 1 1 1 0 0 0 0 13 0 1512.7871 C9JJU9;Q96P11-2;G3V0G9;Q96P11;Q96P11-4;Q63ZY6;Q63ZY6-5;Q63ZY6-4;Q3KNT7-3;Q3KNT7-2;Q3KNT7 C9JJU9 303 315 NSUN5;NSUN5P2;NSUN5P1 Putative methyltransferase NSUN5;Putative methyltransferase NSUN5C;Putative NOL1/NOP2/Sun domain family member 5B yes no 3 3.075E-05 95.273 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 16189000 0 12828000 0 0 3361100 0 493 255 498 2306;2307 1583;1584 1584 2 ALDCSSSIRQPSLHMSAAAASR RAVGTFARALDCSSSI MSAAAASRDITLFHAM R A L S R D 5 2 0 1 1 1 0 0 1 1 2 0 1 0 1 6 0 0 0 0 0 22 1 2315.111 O94776;Q68DB1 O94776 206 227 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 3 3.1177E-74 119.5 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 45090000 0 5717700 9778700 0 0 29594000 494 754 499 2308;2309;2310 1585;1586 1586 2 ALDCSSSVRQPSLHMSAAAASR RSVGTFARALDCSSSV MSAAAASRDITLFHAM R A L S R D 5 2 0 1 1 1 0 0 1 0 2 0 1 0 1 6 0 0 0 1 0 22 1 2301.0954 Q13330;Q13330-3;E7ESY4;E7EN71;H0Y4T7;Q13330-2;F8VSM3;E7EQY4;Q9BTC8-2;D6W5A2;F8W8M8;E7EV10;Q9BTC8;E9PCS8 Q13330 226 247 MTA1;MTA3 Metastasis-associated protein MTA1;Metastasis-associated protein MTA3 no no 3;4 2.0137E-06 76.573 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 2 16152000 0 3201500 1397000 0 0 11553000 495 1078;331 500 2311;2312;2313;2314;2315 1587;1588;1589;1590;1591;1592 1588 6 ALDILQQHASHYK CKSSSESKALDILQQH QQHASHYKSKSPTISD K A L Y K S 2 0 0 1 0 2 0 0 2 1 2 1 0 0 0 1 0 0 1 0 0 13 0 1522.7892 O15014 O15014 1298 1310 ZNF609 Zinc finger protein 609 yes yes 3 0.0018594 70.54 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6606700 0 1648000 395870 1166200 0 3396600 496 701 501 2316;2317;2318;2319 1593 1593 1 ALDMLDAEK KMAEPFTKALDMLDAE LDMLDAEKSAILGLPQ K A L E K S 2 0 0 2 0 0 1 0 0 0 2 1 1 0 0 0 0 0 0 0 0 9 0 1004.4848 C9J4N8;Q9HAV4;E7EQN7;E7EQK9 C9J4N8 430 438 XPO5 Exportin-5 yes no 2 0.020412 70.056 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 12605000 946020 1750500 1857900 1312300 1517400 5221200 497 227 502 2320;2321;2322;2323;2324;2325 1594;1595 1595 2 ALDQSDNDMSAVYR NEVYKRAKALDQSDND NDMSAVYRAYIH____ K A L Y R A 2 1 1 3 0 1 0 0 0 0 1 0 1 0 0 2 0 0 1 1 0 14 0 1583.6886 Q49A26-2;Q49A26;Q49A26-3;Q49A26-4;Q49A26-5 Q49A26-2 519 532 GLYR1 Putative oxidoreductase GLYR1 no no 2 0.0011063 78.529 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 33899000 0 4965800 5814200 4140200 7344800 11633000 498 1168;1169 503 2326;2327;2328;2329;2330 1596;1597;1598;1599;1600 1596 5 ALDVMVSTFHK ________________ VMVSTFHKYSGKEGDK K A L H K Y 1 0 0 1 0 0 0 0 1 0 1 1 1 1 0 1 1 0 0 2 0 11 0 1246.638 P26447 P26447 8 18 S100A4 Protein S100-A4 yes yes 3 0.00080577 93.561 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 14686000 0 6265000 0 1907400 1846000 4667800 499 881 504 2331;2332;2333;2334 1601;1602;1603;1604 1604 4 ALEAVFGK LNTETNEKALEAVFGK ALEAVFGKYGRIVEVL K A L G K Y 2 0 0 0 0 0 1 1 0 0 1 1 0 1 0 0 0 0 0 1 0 8 0 833.4647 H3BT71;P38159-2;P38159;H0Y6E7;H3BNC1;H3BR27;P38159-3 H3BT71 23 30 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 2 0.0085181 93.374 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 14342000 1045400 1564900 992790 0 7012600 3726300 500 649 505 2335;2336;2337;2338;2339 1605;1606;1607;1608 1607 4 ALEDLAGFK QTPKEKAQALEDLAGF LEDLAGFKELFQTPGH Q A L F K E 2 0 0 1 0 0 1 1 0 0 2 1 0 1 0 0 0 0 0 0 0 9 0 962.5073 P46013;F5H4V4;P46013-2 P46013 1220 1228 MKI67 Antigen KI-67 no no 2 0.0070209 96.668 By matching By matching By MS/MS By matching By matching By matching 1 1 11095000 0 0 9700400 0 1394300 0 501 919;920 506 2340;2341 1609 1609 1 ALEDVVQR VRSSDRKKALEDVVQR ALEDVVQRSGHGTEFN K A L Q R S 1 1 0 1 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 2 0 8 0 928.49779 Q14966-3;Q14966;Q14966-4;Q14966-2;C9JBI6;F5H330 Q14966-3 577 584 ZNF638 Zinc finger protein 638 yes no 2 0.014854 87.181 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 4689100 0 805750 988380 0 1217800 1677200 502 1118 507 2342;2343;2344;2345 1610 1610 1 ALEELNQQLEK ERDRLQLKALEELNQQ ELNQQLEKRKEMEERE K A L E K R 1 0 1 0 0 2 3 0 0 0 3 1 0 0 0 0 0 0 0 0 0 11 0 1313.6827 Q96HJ3-2;Q96HJ3 Q96HJ3-2 164 174 CCDC34 Coiled-coil domain-containing protein 34 yes no 2 0.00030636 98.105 By matching By matching By matching By matching By matching By MS/MS 1 1 1351500 0 629310 0 0 0 722240 503 1391 508 2346;2347 1611;1612 1612 2 ALEESNYELEGK ASYLDKVRALEESNYE SNYELEGKIKEWYEKH R A L G K I 1 0 1 0 0 0 4 1 0 0 2 1 0 0 0 1 0 0 1 0 0 12 0 1380.6409 P13645;CON__P13645;CON__P02535-1 P13645 166 177 KRT10 Keratin, type I cytoskeletal 10 yes no 2 3.0473E-07 102.97 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 9698000 0 0 4643600 2567300 2487100 0 + 504 298 509 2348;2349;2350;2351 1613;1614;1615;1616;1617 1613 4 ALEESNYELEGKIK ASYLDKVRALEESNYE YELEGKIKEWYEKHGN R A L I K E 1 0 1 0 0 0 4 1 0 1 2 2 0 0 0 1 0 0 1 0 0 14 1 1621.8199 P13645;CON__P13645;CON__P02535-1 P13645 166 179 KRT10 Keratin, type I cytoskeletal 10 yes no 3 3.2761E-05 93.348 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 10487000 0 6749000 1485600 287960 0 1964200 + 505 298 510 2352;2353;2354;2355 1618;1619;1620;1621 1620 4 ALEFVTNPDIAAKK RALRKKRKALEFVTNP NPDIAAKKKMKKHKNK K A L K K K 3 0 1 1 0 0 1 0 0 1 1 2 0 1 1 0 1 0 0 1 0 14 1 1515.8297 O75691 O75691 2732 2745 UTP20 Small subunit processome component 20 homolog yes yes 3 2.9786E-08 98.902 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 21570000 7559700 7914300 0 1807600 0 4288400 506 750 511 2356;2357;2358;2359 1622;1623;1624;1625 1623 4 ALEGYADRGNFPAHPVNEEK QSLPGEARALEGYADR AHPVNEEKETKEGSVA R A L E K E 3 1 2 1 0 0 3 2 1 0 1 1 0 1 2 0 0 0 1 1 0 20 1 2213.0501 E7EVA0;P27816-4;E9PGM5;B5MEG9 E7EVA0 1609 1628 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.023431 35.852 By MS/MS By matching By matching By matching By matching By matching 1 1282100 1282100 0 0 0 0 0 507 388 512 2360 1626 1626 1 ALEHSALAINHK DSYASVIKALEHSALA SALAINHKLEIKYIDS K A L H K L 3 0 1 0 0 0 1 0 2 1 2 1 0 0 0 1 0 0 0 0 0 12 0 1302.7044 P17812;B4DR64;Q9NRF8 P17812 320 331 CTPS1;CTPS2 CTP synthase 1;CTP synthase 2 yes no 3 0.00012288 97.452 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 11600000 0 1631000 907270 569280 2121900 6370200 508 852 513 2361;2362;2363;2364;2365 1627;1628;1629;1630 1629 4 ALELFVK RQAANIVRALELFVKA RALELFVKADVLSGEN R A L V K A 1 0 0 0 0 0 1 0 0 0 2 1 0 1 0 0 0 0 0 1 0 7 0 818.49019 Q9P275;Q9P275-2;F5H3B9 Q9P275 284 290 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.011502 91.906 By matching By MS/MS By matching By matching By matching By matching 1 12995000 0 12995000 0 0 0 0 509 1576 514 2366 1631 1631 1 ALENLEKNK A L N K 1 0 2 0 0 0 2 0 0 0 2 2 0 0 0 0 0 0 0 0 0 9 1 1057.5768 REV__Q9Y4I1-2 yes no 2 0.039734 76.064 By matching By matching By matching By matching By matching By MS/MS 1 2435500 0 0 0 0 0 2435500 + 510 1673 515 2367 1632 1632 1 ALERDPTEDDVESK CRTRSQKRALERDPTE TEDDVESKKIKMERGL R A L S K K 1 1 0 3 0 0 3 0 0 0 1 1 0 0 1 1 1 0 0 1 0 14 1 1602.7373 Q86YP4;B5MC40;Q86YP4-2;C9JHD7;C9JJK9;C9JVY3;C9JMI3;C9JGN4 Q86YP4 14 27 GATAD2A Transcriptional repressor p66-alpha yes no 3 0.0041187 58.32 By matching By matching By matching By matching By matching By MS/MS 1 1 6895100 0 0 2589400 0 0 4305700 511 170 516 2368;2369 1633 1633 1 ALETDSVSGVSK SEINSKEKALETDSVS DSVSGVSKQSKKQKL_ K A L S K Q 1 0 0 1 0 0 1 1 0 0 1 1 0 0 0 3 1 0 0 2 0 12 0 1191.5983 Q15022 Q15022 721 732 SUZ12 Polycomb protein SUZ12 yes yes 2 0.0035654 69.229 By MS/MS By MS/MS By matching By matching By matching By MS/MS 2 1 1 1 1 1 19745000 4920500 3170400 2802900 3449900 265880 5135300 512 1126 517 2370;2371;2372;2373;2374;2375;2376 1634;1635;1636;1637;1638 1638 5 ALETDSVSGVSKQSK SEINSKEKALETDSVS SGVSKQSKKQKL____ K A L S K K 1 0 0 1 0 1 1 1 0 0 1 2 0 0 0 4 1 0 0 2 0 15 1 1534.7839 Q15022 Q15022 721 735 SUZ12 Polycomb protein SUZ12 yes yes 2;3 7.1126E-06 69.045 By MS/MS By matching By MS/MS By matching By matching By matching 2 1 1 1 7240700 2191000 916080 2172100 1961500 0 0 513 1126 518 2377;2378;2379;2380;2381 1639;1640;1641 1641 2 ALETIGANLQK PLSMGPQKALETIGAN TIGANLQKQYENWQPR K A L Q K Q 2 0 1 0 0 1 1 1 0 1 2 1 0 0 0 0 1 0 0 0 0 11 0 1156.6452 Q8N122-2;F5H7J5;Q8N122 Q8N122-2 98 108 RPTOR Regulatory-associated protein of mTOR yes no 2 0.0073069 68.786 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3209500 0 0 1127700 421840 0 1660000 514 528 519 2382;2383;2384 1642 1642 1 ALETVFGK LNTETNEKALETVFGK ALETVFGKYGRIVEVL K A L G K Y 1 0 0 0 0 0 1 1 0 0 1 1 0 1 0 0 1 0 0 1 0 8 0 863.47527 Q96E39 Q96E39 23 30 RBMXL1 RNA binding motif protein, X-linked-like-1 yes yes 2 0.0055147 107.9 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 2 1 42254000 2026700 4586500 5817600 6257800 11911000 11655000 515 1379 520 2385;2386;2387;2388;2389;2390;2391;2392 1643;1644;1645;1646;1647;1648 1643 6 ALEVSEDVK PETPKASKALEVSEDV LEVSEDVKVSKASGVS K A L V K V 1 0 0 1 0 0 2 0 0 0 1 1 0 0 0 1 0 0 0 2 0 9 0 988.50769 Q9UNF1 Q9UNF1 48 56 MAGED2 Melanoma-associated antigen D2 yes yes 2 0.016022 74.376 By matching By MS/MS By matching By matching By matching By matching 1 1047900 0 1047900 0 0 0 0 516 1614 521 2393 1649 1649 1 ALEYTIYNQELNETR QKWDKMRRALEYTIYN NQELNETRAKLDELSA R A L T R A 1 1 2 0 0 1 3 0 0 1 2 0 0 0 0 0 2 0 2 0 0 15 0 1855.8952 Q9UQE7 Q9UQE7 222 236 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.009028 47.639 By matching By matching By matching By matching By MS/MS By matching 1 2916100 0 0 0 0 2916100 0 517 1625 522 2394 1650 1650 1 ALEYTIYNQELNETRAK QKWDKMRRALEYTIYN ELNETRAKLDELSAKR R A L A K L 2 1 2 0 0 1 3 0 0 1 2 1 0 0 0 0 2 0 2 0 0 17 1 2055.0273 Q9UQE7 Q9UQE7 222 238 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 3.5568E-08 94.007 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 18318000 0 6295500 0 5580200 0 6442100 518 1625 523 2395;2396;2397 1651;1652 1651 1 ALFRALK VQILGAEKALFRALKS KALFRALKSRRDTPKY K A L L K S 2 1 0 0 0 0 0 0 0 0 2 1 0 1 0 0 0 0 0 0 0 7 1 817.51741 Q9Y2X3;O00567;H0YDU4;H0Y653;E9PDI8 Q9Y2X3 324 330 NOP58;NOP56 Nucleolar protein 58;Nucleolar protein 56 no no 2 0.024653 99.384 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 7415200 780390 0 1131100 1352900 2567900 1582800 519 1640;692 524 2398;2399;2400;2401;2402 1653;1654 1654 2 ALGAQIEK GGFGSMLRALGAQIEK ALGAQIEKTTNREACR R A L E K T 2 0 0 0 0 1 1 1 0 1 1 1 0 0 0 0 0 0 0 0 0 8 0 828.47052 Q6IQ49-2;C9JIQ2;Q6IQ49 Q6IQ49-2 75 82 SDE2 Protein SDE2 homolog yes no 2 0.020209 79.713 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2750300 283950 769420 1697000 0 0 0 520 249 525 2403;2404;2405 1655 1655 1 ALGLDTGQQQDAQEFSK IDPSGFVKALGLDTGQ QDAQEFSKLFMSLLED K A L S K L 2 0 0 2 0 4 1 2 0 0 2 1 0 1 0 1 1 0 0 0 0 17 0 1834.8697 Q86UV5;Q86UV5-2;B7ZKS7;Q86UV5-3;Q86UV5-7;Q86UV5-4 Q86UV5 171 187 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes no 2 0.001872 75.445 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 5358500 0 770670 1743000 0 0 2844800 521 1264 526 2406;2407;2408 1656;1657;1658 1658 3 ALGQEADKGLSGCGIVYCR NLKDFCLKALGQEADK GCGIVYCRTREACEQL K A L C R T 2 1 0 1 2 1 1 4 0 1 2 1 0 0 0 1 0 0 1 1 0 19 1 2052.9721 O94762;B7Z8Y7;O94762-2;O94762-3 O94762 249 267 RECQL5 ATP-dependent DNA helicase Q5 yes no 3 0.026903 35.348 By matching By MS/MS By matching By matching By matching By matching 1 1 1922900 0 1359700 0 563200 0 0 522 197 527 2409;2410 1659 1659 1 ALGQNKAHTPFRESK LALKECIRALGQNKAH HTPFRESKLTQVLRDS R A L S K L 2 1 1 0 0 1 1 1 1 0 1 2 0 1 1 1 1 0 0 0 0 15 2 1682.8853 B7Z6Q6;Q99661;Q99661-2;B7Z7M6;H0Y5Z9 B7Z6Q6 488 502 KIF2C Kinesin-like protein KIF2C yes no 3;4 6.6087E-05 89.46 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 2 1 2 50235000 0 4099600 14412000 4281100 8728700 18713000 523 193 528 2411;2412;2413;2414;2415;2416;2417;2418 1660;1661;1662;1663 1661 4 ALGQNPTNAEVLK SQCGDVMRALGQNPTN PTNAEVLKVLGNPKSD R A L L K V 2 0 2 0 0 1 1 1 0 0 2 1 0 0 1 0 1 0 0 1 0 13 0 1353.7252 F8W1R7;P60660-2;P60660;G3V1V0;F8VZV5;G8JLA2;B7Z6Z4;F8VPF3;F8W1I5;P14649 F8W1R7 38 50 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B yes no 2 0.0019654 72.731 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 6729900 1503200 0 1851500 0 0 3375200 524 552 529 2419;2420;2421 1664;1665;1666 1665 2 ALGSAQYEDPRNLHSAGR PGFASQDKALGSAQYE RNLHSAGRSSSPAGET K A L G R S 3 2 1 1 0 1 1 2 1 0 2 0 0 0 1 2 0 0 1 0 0 18 1 1940.9453 Q9BTC0 Q9BTC0 1694 1711 DIDO1 Death-inducer obliterator 1 yes yes 3;4 0.0092646 43.557 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 2 1 2 2 21756000 470950 5111800 2625900 1152300 3613100 8782400 525 1447 530 2422;2423;2424;2425;2426;2427;2428;2429;2430;2431 1667;1668;1669 1669 2 ALGTAADLGTLAPR ELEAAQERALGTAADL DLGTLAPRGRLAGVTE R A L P R G 4 1 0 1 0 0 0 2 0 0 3 0 0 0 1 0 2 0 0 0 0 14 0 1325.7303 Q96B70 Q96B70 240 253 LENG9 Leukocyte receptor cluster member 9 yes yes 2 0.0025478 63.29 By matching By matching By matching By matching By matching By MS/MS 1 2666600 0 0 0 0 0 2666600 526 1370 531 2432 1670 1670 1 ALHGEATNSMASDNQVRK MAAEEAMKALHGEATN ASDNQVRKIGELVRYL K A L R K I 3 1 2 1 0 1 1 1 1 0 1 1 1 0 0 2 1 0 0 1 0 18 1 1927.917 P55265-3 P55265-3 679 696 ADAR Double-stranded RNA-specific adenosine deaminase yes yes 4 0.00078174 77.051 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1704900 0 0 343390 0 898380 463090 527 968 532 2433;2434;2435 1671;1672;1673 1673 3 ALHLGDTVDSDQFK VGIKRHVKALHLGDTV TVDSDQFKREEDFYYT K A L F K R 1 0 0 3 0 1 0 1 1 0 2 1 0 1 0 1 1 0 0 1 0 14 0 1544.7471 Q9H8N7 Q9H8N7 303 316 ZNF395 Zinc finger protein 395 yes yes 3 0.0089511 50.46 By matching By MS/MS By matching By matching By matching By matching 1 1 2334000 0 811170 0 0 0 1522800 528 1502 533 2436;2437 1674 1674 1 ALIAAQYSGAQVR PENWRAFKALIAAQYS QYSGAQVRVLSAPPHF K A L V R V 4 1 0 0 0 2 0 1 0 1 1 0 0 0 0 1 0 0 1 1 0 13 0 1346.7306 P26641;B4DTG2 P26641 18 30 EEF1G Elongation factor 1-gamma yes no 2 5.7312E-16 112.02 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 34921000 2812800 6712600 3258000 771910 4910300 16456000 529 127 534 2438;2439;2440;2441;2442;2443 1675;1676;1677;1678;1679 1677 5 ALIEMEK YEYAMRWKALIEMEKQ KALIEMEKQQQDQVDR K A L E K Q 1 0 0 0 0 0 2 0 0 1 1 1 1 0 0 0 0 0 0 0 0 7 0 832.43644 Q15233;F5GYZ3;C9JYS8;H7C367 Q15233 273 279 NONO Non-POU domain-containing octamer-binding protein yes no 2 0.022651 107.32 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 7068400 676060 824350 0 0 2450500 3117500 530 1133 535 2444;2445;2446;2447 1680;1681;1682;1683 1681 4 ALIEMEKQQQDQVDRNIK YEYAMRWKALIEMEKQ DQVDRNIKEAREKLEM K A L I K E 1 1 1 2 0 4 2 0 0 2 1 2 1 0 0 0 0 0 0 1 0 18 2 2185.1161 Q15233;F5GYZ3;C9JYS8;H7C367 Q15233 273 290 NONO Non-POU domain-containing octamer-binding protein yes no 3 0.01161 49.066 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 10626000 1932000 0 2281300 787350 0 5625700 531 1133 536 2448;2449;2450;2451 1684;1685;1686;1687 1686 4 ALILSPTR HSAQTGARALILSPTR ALILSPTRELALQTLK R A L T R E 1 1 0 0 0 0 0 0 0 1 2 0 0 0 1 1 1 0 0 0 0 8 0 869.53345 Q8TDD1;Q8TDD1-2;F8VRX4 Q8TDD1 169 176 DDX54 ATP-dependent RNA helicase DDX54 yes no 2 0.029415 71.379 By matching By matching By matching By matching By matching By MS/MS 1 1 16239000 0 0 0 0 12549000 3689900 532 1336 537 2452;2453 1688 1688 1 ALIYTMMELKK A L K K 1 0 0 0 0 0 1 0 0 1 2 2 2 0 0 0 1 0 1 0 0 11 1 1339.7244 REV__B4DXM2 yes yes 3 0.040677 43.635 By matching By MS/MS By matching By matching By matching By matching 1 521950 0 521950 0 0 0 0 + 533 1666 538 2454 1689 1689 185 0 ALKAQNDLIWNIK DKDSKLEKALKAQNDL NDLIWNIKDELKKVCS K A L I K D 2 0 2 1 0 1 0 0 0 2 2 2 0 0 0 0 0 1 0 0 0 13 1 1525.8617 P09874 P09874 237 249 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.0004583 91.307 By matching By matching By matching By MS/MS By matching By matching 1 4143800 0 0 0 4143800 0 0 534 815 539 2455 1690 1690 0 ALKNPSEEYGK YNIATRRKALKNPSEE NPSEEYGKILEVVGRY K A L G K I 1 0 1 0 0 0 2 1 0 0 1 2 0 0 1 1 0 0 1 0 0 11 1 1234.6194 H0Y818;P40692;F5H745;E9PEB4;H0Y3I0;E9PCU2;C9JZ54 H0Y818 157 167 MLH1 DNA mismatch repair protein Mlh1 yes no 3 0.0074498 68.786 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 2553300 0 394480 668800 283580 484880 721530 535 614 540 2456;2457;2458;2459;2460 1691;1692;1693 1692 3 ALLAMYTNQAEQCRK LQAIEFNKALLAMYTN NQAEQCRKISASLQSQ K A L R K I 3 1 1 0 1 2 1 0 0 0 2 1 1 0 0 0 1 0 1 0 0 15 1 1795.8709 G5E9Z8;H0YH39;O76094 G5E9Z8 250 264 SRP72 Signal recognition particle subunit SRP72 yes no 3 0.0023687 53.869 By matching By matching By matching By matching By matching By MS/MS 1 1 1812900 0 0 0 826030 0 986900 536 600 541 2461;2462 1694 1694 1 ALLCKPITQTK PPRLLKNKALLCKPIT CKPITQTKATSCKPHT K A L T K A 1 0 0 0 1 1 0 0 0 1 2 2 0 0 1 0 2 0 0 0 0 11 1 1271.7271 Q5VZL5-2;Q5VZL5;H7C1I7;Q5VZL5-3;Q5VZL5-4 Q5VZL5-2 856 866 ZMYM4 Zinc finger MYM-type protein 4 yes no 2;3 0.011762 75.416 By matching By MS/MS By MS/MS By MS/MS By matching By matching 2 2 2 2 2 10642000 0 1909800 1909300 1420500 2338600 3063800 537 1213 542 2463;2464;2465;2466;2467;2468;2469;2470;2471;2472 1695;1696;1697;1698;1699;1700 1700 6 ALLDASETTSTR QQEYTEMKALLDASET ASETTSTRKIKEEEKR K A L T R K 2 1 0 1 0 0 1 0 0 0 2 0 0 0 0 2 3 0 0 0 0 12 0 1263.6307 Q14258 Q14258 250 261 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 0.0027469 80.69 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 6126900 602120 0 925410 534910 2320200 1744200 538 1105 543 2473;2474;2475;2476;2477;2478;2479 1701;1702;1703;1704;1705;1706 1705 5 ALLDASETTSTRK QQEYTEMKALLDASET SETTSTRKIKEEEKRV K A L R K I 2 1 0 1 0 0 1 0 0 0 2 1 0 0 0 2 3 0 0 0 0 13 1 1391.7256 Q14258 Q14258 250 262 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2;3 1.8365E-59 134.99 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 45269000 6568300 4407300 5497500 3362900 13450000 11983000 539 1105 544 2480;2481;2482;2483;2484;2485;2486;2487;2488;2489;2490;2491;2492 1707;1708;1709;1710;1711;1712;1713;1714;1715;1716;1717 1711 11 ALLELQQTTVKEK QSATSTIKALLELQQT QQTTVKEKLESKPRQP K A L E K L 1 0 0 0 0 2 2 0 0 0 3 2 0 0 0 0 2 0 0 1 0 13 1 1499.8559 Q7Z589-2;E9PMC9;Q7Z589;Q17RM7;B7ZKU2;B7ZKU0 Q7Z589-2 778 790 EMSY;C11orf30 Protein EMSY yes no 3 0.0012891 78.287 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 3257700 0 617170 343120 160040 0 2137300 540 208 545 2493;2494;2495;2496 1718;1719 1718 2 ALLEMAEEK SRWESSNKALLEMAEE LLEMAEEKTVRDKELE K A L E K T 2 0 0 0 0 0 3 0 0 0 2 1 1 0 0 0 0 0 0 0 0 9 0 1032.5161 P40222 P40222 442 450 TXLNA Alpha-taxilin yes yes 2 0.0065883 103.55 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 12767000 0 1330600 1161100 1671700 3650900 4953200 541 907 546 2497;2498;2499;2500;2501 1720;1721 1720 2 ALLERTGYTLDVTTGQRK GPDEAKIKALLERTGY DVTTGQRKYGGPPPDS K A L R K Y 1 2 0 1 0 1 1 2 0 0 3 1 0 0 0 0 4 0 1 1 0 18 2 2021.0906 O43390;O43390-2;E7ETM7;F6UXX1;O60506-2;O60506;O60506-4;O60506-3 O60506-2 126 143 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 3 0.026984 43.208 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3306600 0 1006000 0 1032100 0 1268500 542 731;715 547 2502;2503;2504 1722 1722 1 ALLLKGKAPVDPECTAK DKQDESVKALLLKGKA VDPECTAKVGKAHVYC K A L A K V 3 0 0 1 1 0 1 1 0 0 3 3 0 0 2 0 1 0 0 1 0 17 2 1810.0023 E9PJ27;B4DV82;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 72 88 PARP2 Poly [ADP-ribose] polymerase 2 yes no 3 0.00072486 58.824 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 8212900 1634400 1090200 0 1425400 2520500 1542400 543 133 548 2505;2506;2507;2508;2509 1723;1724;1725;1726;1727 1726 3 ALLMCEACR KSCRNLRKALLMCEAC LLMCEACRVQQYPFTA K A L C R V 2 1 0 0 2 0 1 0 0 0 2 0 1 0 0 0 0 0 0 0 0 9 0 1122.4984 C9JU95;P40938 C9JU95 226 234 RFC3 Replication factor C subunit 3 yes no 2 0.026416 66.299 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 15361000 0 2926600 1403800 0 1828600 9201800 544 270 549 2510;2511;2512;2513 1728 1728 1 ALLPELR APWCPPCRALLPELRR RALLPELRRASNLLYG R A L L R R 1 1 0 0 0 0 1 0 0 0 3 0 0 0 1 0 0 0 0 0 0 7 0 810.49634 Q8IXB1;Q8IXB1-2;F8W884 Q8IXB1 485 491 DNAJC10 DnaJ homolog subfamily C member 10 yes no 2 3.2439E-07 121.29 By matching By matching By matching By matching By matching By MS/MS 1 11148000 0 0 0 0 0 11148000 545 1287 550 2514 1729;1730 1729 2 ALLQELQR PSEQLQRKALLQELQR ALLQELQRWAGPLPAT K A L Q R W 1 1 0 0 0 2 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 8 0 969.56073 H0YCY5;E9PNY0;G8JLP0;Q9UIF7-6;Q9UIF7-5;Q9UIF7-4;Q9UIF7-3;Q9UIF7-2;Q9UIF7;E5KP25 H0YCY5 83 90 MUTYH A/G-specific adenine DNA glycosylase yes no 2 0.026373 74.255 By matching By matching By matching By matching By matching By MS/MS 1 1 1017300 0 220470 0 0 0 796780 546 337 551 2515;2516 1731 1731 1 ALLQMAEEK TKWENNNKALLQMAEE LLQMAEEKTVRDKEYK K A L E K T 2 0 0 0 0 1 2 0 0 0 2 1 1 0 0 0 0 0 0 0 0 9 0 1031.5321 Q9NUQ3;Q9NUQ3-2 Q9NUQ3 409 417 TXLNG Gamma-taxilin yes no 2 0.036278 61.691 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 10602000 0 1751700 1289400 1544800 2568300 3448100 547 1546 552 2517;2518;2519;2520;2521 1732 1732 1 ALLQQQPEDDSK NMAKGLQRALLQQQPE QQPEDDSKRSPRPQDL R A L S K R 1 0 0 2 0 3 1 0 0 0 2 1 0 0 1 1 0 0 0 0 0 12 0 1370.6678 Q96K98;F5H5Y3;G3V1U4;Q9UHB9;B3KUU5;Q9UHB9-2;E7ETK6 Q96K98 145 156 SRP68 Signal recognition particle subunit SRP68 yes no 2 0.0018295 89.805 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 3700100 0 742660 771750 635860 0 1549800 548 521 553 2522;2523;2524;2525 1733;1734;1735;1736 1735 4 ALLQTHPEAQR PGPATLAKALLQTHPE QTHPEAQRAIEAAPQE K A L Q R A 2 1 0 0 0 2 1 0 1 0 2 0 0 0 1 0 1 0 0 0 0 11 0 1262.6731 Q96CP2;I3L1Y9;I3L4I0 Q96CP2 79 89 FLYWCH2 FLYWCH family member 2 yes no 2;3 9.5353E-56 141.91 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 4 2 179060000 23113000 37087000 27479000 10716000 37325000 43341000 549 683 554 2526;2527;2528;2529;2530;2531;2532;2533;2534;2535;2536;2537;2538;2539;2540;2541 1737;1738;1739;1740;1741;1742;1743;1744;1745;1746;1747;1748;1749 1748 13 ALLQTHPEAQRAIEAAPQEPEQK PGPATLAKALLQTHPE APQEPEQKRSRQDPGT K A L Q K R 5 1 0 0 0 4 4 0 1 1 2 1 0 0 3 0 1 0 0 0 0 23 1 2554.314 Q96CP2;I3L1Y9 Q96CP2 79 101 FLYWCH2 FLYWCH family member 2 yes no 3;4 1.0466E-21 94.707 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 3 4 2 558010000 112520000 72083000 141640000 95114000 64377000 72282000 550 683 555 2542;2543;2544;2545;2546;2547;2548;2549;2550;2551;2552;2553;2554;2555;2556;2557 1750;1751;1752;1753;1754;1755;1756;1757;1758;1759 1757 10 ALLQTHPEAQRAIEAAPQEPEQKR PGPATLAKALLQTHPE PQEPEQKRSRQDPGTD K A L K R S 5 2 0 0 0 4 4 0 1 1 2 1 0 0 3 0 1 0 0 0 0 24 2 2710.4151 Q96CP2;I3L1Y9 Q96CP2 79 102 FLYWCH2 FLYWCH family member 2 yes no 4 0.0034566 45.885 By matching By matching By matching By matching By MS/MS By matching 1 1 1 5119200 1895000 0 0 0 1079900 2144300 551 683 556 2558;2559;2560 1760 1760 1 ALLSDMVR EEAIQNFKALLSDMVR ALLSDMVRSSDVSWSD K A L V R S 1 1 0 1 0 0 0 0 0 0 2 0 1 0 0 1 0 0 0 1 0 8 0 903.48479 O14776-2;O14776;G3V220 O14776-2 884 891 TCERG1 Transcription elongation regulator 1 yes no 2 1.3314E-24 131.03 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 20263000 3307400 0 0 722300 0 16233000 552 696 557 2561;2562;2563 1761;1762;1763 1762 3 ALLTPVAIAAGRK AVGDVCGKALLTPVAI VAIAAGRKLAHRLFEY K A L R K L 4 1 0 0 0 0 0 1 0 1 2 1 0 0 1 0 1 0 0 1 0 13 1 1279.7976 P00390-5;P00390-4;P00390-2;P00390-3;P00390 P00390-5 298 310 GSR Glutathione reductase, mitochondrial yes no 3 0.00094828 73.435 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 25606000 8710500 9605800 0 7289600 0 0 553 780 558 2564;2565;2566 1764;1765;1766 1765 3 ALLVQVVNK CNKPEEEKALLVQVVN LLVQVVNKLGDPQNRI K A L N K L 1 0 1 0 0 1 0 0 0 0 2 1 0 0 0 0 0 0 0 3 0 9 0 982.61752 Q03701;F5H3Y6 Q03701 382 390 CEBPZ CCAAT/enhancer-binding protein zeta yes no 2 0.022914 68.224 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 3538900 2029200 1509700 0 0 0 0 554 1037 559 2567;2568 1767;1768 1768 2 ALMTSHGSVEGR TPKRALRRALMTSHGS SHGSVEGRSPSSNDKH R A L G R S 1 1 0 0 0 0 1 2 1 0 1 0 1 0 0 2 1 0 0 1 0 12 0 1243.5979 Q9H8V3-2;Q9H8V3;G5E9L8;Q9H8V3-3;H7C103 Q9H8V3-2 822 833 ECT2 Protein ECT2 yes no 3 0.0087972 58.511 By matching By matching By matching By matching By matching By MS/MS 1 552400 0 0 0 0 0 552400 555 598 560 2569 1769;1770 1770 2 ALNSIIDVYHK ________________ SIIDVYHKYSLIKGNF K A L H K Y 1 0 1 1 0 0 0 0 1 2 1 1 0 0 0 1 0 0 1 1 0 11 0 1271.6874 P05109 P05109 8 18 S100A8 Protein S100-A8;Protein S100-A8, N-terminally processed yes yes 3 1.1429E-41 131.09 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 27591000 0 9995300 8827100 2984500 0 5783800 556 794 561 2570;2571;2572;2573 1771;1772;1773;1774 1774 4 ALNVAPVRDTK ________________ VAPVRDTKWLTLEVCR M A L T K W 2 1 1 1 0 0 0 0 0 0 1 1 0 0 1 0 1 0 0 2 0 11 1 1182.6721 O95205;Q5VZF2-3;Q5VZF2-2;Q5VZF2;B4E3F7 O95205 2 12 MBLL;MBNL2 Muscleblind-like protein 2 yes no 2 0.0045253 81.625 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4426800 278360 1185600 722060 0 0 2240700 557 764 562 2574;2575;2576;2577 1775 1775 1 ALPASETPK TPRGKKRKALPASETP LPASETPKAAESETPG K A L P K A 2 0 0 0 0 0 1 0 0 0 1 1 0 0 2 1 1 0 0 0 0 9 0 912.49165 O76021;B4DJ58 O76021 409 417 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2 0.026416 66.299 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 3340100 0 852020 1866800 63815 436280 121150 558 753 563 2578;2579;2580;2581;2582 1776 1776 1 ALPCIVDVRDEQQISAAVEK EIEAVGGKALPCIVDV QISAAVEKAIKKFGAY K A L E K A 3 1 0 2 1 2 2 0 0 2 1 1 0 0 1 1 0 0 0 3 0 20 1 2240.1471 Q6YN16-2;Q6YN16 Q6YN16-2 68 87 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes no 3 0.014812 71.143 By matching By matching By MS/MS By matching By matching By matching 1 0 0 0 0 0 0 0 559 1239 564 2583 1777 1777 1 ALPDRALVNCQYSSATFSTGERK EIRGSRARALPDRALV TFSTGERKRRPHGDRK R A L R K R 3 2 1 1 1 1 1 1 0 0 2 1 0 1 1 3 2 0 1 1 0 23 2 2570.2547 Q9NPD3;E9PI41 Q9NPD3 65 87 EXOSC4 Exosome complex component RRP41 yes no 4 2.6178E-10 80.109 By matching By matching By matching By matching By matching By MS/MS 1 14464000 0 0 0 0 0 14464000 560 1526 565 2584 1778 1778 1 ALPLEAEVAPVK NVILTKDKALPLEAEV EAEVAPVKDMAQLPET K A L V K D 3 0 0 0 0 0 2 0 0 0 2 1 0 0 2 0 0 0 0 2 0 12 0 1235.7125 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0 482 493 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.015258 54.65 By matching By MS/MS By matching By matching By matching By matching 1 34327000 0 34327000 0 0 0 0 561 388 566 2585 1779 1779 1 ALPPLPRPPTPK DGPRVLERALPPLPRP LPRPPTPKLEPKEESP R A L P K L 1 1 0 0 0 0 0 0 0 0 2 1 0 0 6 0 1 0 0 0 0 12 1 1282.7761 Q8N6T7-4;Q8N6T7-2;Q8N6T7;B4DDV3 Q8N6T7-4 216 227 SIRT6 NAD-dependent protein deacetylase sirtuin-6 yes no 3 0.036823 45.653 By matching By matching By matching By matching By matching By MS/MS 1 2647600 0 0 0 0 0 2647600 562 1306 567 2586 1780 1780 1 ALQAQVQYQQQHEQQK ELTNEKEKALQAQVQY QQQHEQQKKDLEILHQ K A L Q K K 2 0 0 0 0 8 1 0 1 0 1 1 0 0 0 0 0 0 1 1 0 16 0 1953.9657 F5GXY5;B4DYM7;Q6UVJ0 F5GXY5 54 69 SASS6 Spindle assembly abnormal protein 6 homolog yes no 3 0.0015714 59.248 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 4125100 497280 658090 880380 227720 814130 1047600 563 145 568 2587;2588;2589;2590;2591;2592 1781 1781 1 ALQEEIDR HIDQVRRKALQEEIDR ALQEEIDRESGKTEAS K A L D R E 1 1 0 1 0 1 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 0 972.48762 Q1ED39;H3BPL4;H3BNU8 Q1ED39 334 341 KNOP1 Lysine-rich nucleolar protein 1 yes no 2 0.0205 79.474 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4095600 632990 1240200 0 469320 0 1753100 564 1157 569 2593;2594;2595;2596 1782 1782 1 ALQEEIDRESGK HIDQVRRKALQEEIDR EIDRESGKTEASETRK K A L G K T 1 1 0 1 0 1 3 1 0 1 1 1 0 0 0 1 0 0 0 0 0 12 1 1373.6787 Q1ED39;H3BPL4;H3BNU8 Q1ED39 334 345 KNOP1 Lysine-rich nucleolar protein 1 yes no 2;3 9.4484E-50 131.79 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 2 2 2 2 2 79660000 17225000 8222400 10319000 8963800 15259000 19671000 565 1157 570 2597;2598;2599;2600;2601;2602;2603;2604;2605;2606;2607;2608;2609 1783;1784;1785;1786;1787;1788;1789;1790;1791 1786 9 ALQEESLGMEAQVER PELPAGPRALQEESLG GMEAQVERAMEGNSSD R A L E R A 2 1 0 0 0 2 4 1 0 0 2 0 1 0 0 1 0 0 0 1 0 15 0 1688.8039 H9KV46;Q86Y91;Q86Y91-2;Q86Y91-3;Q86Y91-4 H9KV46 438 452 KIF18B Kinesin-like protein KIF18B yes no 2 0.0013603 68.978 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 3255600 0 1345200 0 0 0 1910500 566 675 571 2610;2611 1792;1793 1792 2 ALQEGEGDLSISADRLSEK PEAVGDQKALQEGEGD SADRLSEKRSPNDFAL K A L E K R 2 1 0 2 0 1 3 2 0 1 3 1 0 0 0 3 0 0 0 0 0 19 1 2016.9964 P49589;P49589-3;P49589-2;B4DKY1;A8MVQ3 P49589 296 314 CARS Cysteine--tRNA ligase, cytoplasmic yes no 3 3.3197E-17 97.502 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 129820000 48334000 0 24382000 10566000 6781000 39756000 567 938 572 2612;2613;2614;2615;2616 1794;1795;1796;1797;1798 1798 5 ALQGSLGGVEK QKLEEKERALQGSLGG GSLGGVEKELTLRSQA R A L E K E 1 0 0 0 0 1 1 3 0 0 2 1 0 0 0 1 0 0 0 1 0 11 0 1057.5768 O75150-4;H3BP71;O75150;F8W8Z4;F6SYU7;Q6ZN99 O75150-4 737 747 RNF40 E3 ubiquitin-protein ligase BRE1B yes no 2 0.020499 78.342 By matching By matching By matching By matching By matching By MS/MS 1 2435500 0 0 0 0 0 2435500 568 634 573 2617 1799 1799 0 ALQHMAAMSSAQIVSATAIHNK MDQTAKDKALQHMAAM SATAIHNKLGLPGIPR K A L N K L 6 0 1 0 0 2 0 0 2 2 1 1 2 0 0 3 1 0 0 1 0 22 0 2279.1515 A4FUP2;H0YEJ9;P28347;H0YE88;E9PKB7 A4FUP2 107 128 TEAD1 Transcriptional enhancer factor TEF-1 yes no 3;4 0 205.55 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 4 3 3 4 217410000 38990000 30998000 32100000 36788000 5462500 73074000 569 12 574;575 2618;2619;2620;2621;2622;2623;2624;2625;2626;2627;2628;2629;2630;2631;2632;2633;2634;2635;2636 1800;1801;1802;1803;1804;1805;1806;1807;1808;1809;1810;1811;1812;1813;1814;1815 1803 1;2 15 ALQHTESPSETNKPHSK PSSAKKPKALQHTESP ETNKPHSKSKKRHLDQ K A L S K S 1 0 1 0 0 1 2 0 2 0 1 2 0 0 2 3 2 0 0 0 0 17 1 1889.9232 Q14CA3;Q14669;B4DYJ6;G5E9G6;C9JLD7;C9JLJ5;C9JSX9 Q14CA3 136 152 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 4 0.001905 57.148 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 2640200 0 771380 1868900 0 0 0 570 1122 576 2637;2638 1816;1817 1817 2 ALQQEQEIEQR RLKNAFVKALQQEQEI QEQEIEQRLQQQAALS K A L Q R L 1 1 0 0 0 4 3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 11 0 1370.679 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7;F5H7D9;H7C3H1;Q8WXI9 Q8WXI9 468 478 GATAD2A;GATAD2B Transcriptional repressor p66-alpha;Transcriptional repressor p66-beta no no 2 6.5271E-20 119.74 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 124120000 3213800 35325000 25973000 1126500 2696800 55788000 571 1344;170 577 2639;2640;2641;2642;2643;2644;2645 1818;1819;1820;1821;1822;1823;1824 1819 7 ALQQEQEIEQRLLQQGTAPAQAK RLKAAFVKALQQEQEI GTAPAQAKAEPTAAPH K A L A K A 4 1 0 0 0 7 3 1 0 1 3 1 0 0 1 0 1 0 0 0 0 23 1 2577.3511 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7;F5H7D9;H7C3H1 Q86YP4 465 487 GATAD2A Transcriptional repressor p66-alpha yes no 3 3.4432E-84 119.18 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 153930000 0 66098000 75185000 12651000 0 0 572 170 578 2646;2647;2648 1825;1826;1827 1827 3 ALQQEQEIEQRLQQQAALSPTTAPAVSSVSK RLKNAFVKALQQEQEI PAVSSVSKQETIMRHH K A L S K Q 5 1 0 0 0 7 3 0 0 1 3 1 0 0 2 4 2 0 0 2 0 31 1 3335.7321 Q8WXI9 Q8WXI9 468 498 GATAD2B Transcriptional repressor p66-beta yes yes 3 3.0344E-05 40.067 By matching By MS/MS By matching By matching By matching By matching 1 105710000 0 105710000 0 0 0 0 573 1344 579 2649 1828;1829 1829 2 ALQQVQEKEVR ELHANLARALQQVQEK QVQEKEVRAQKLADDL R A L V R A 1 1 0 0 0 3 2 0 0 0 1 1 0 0 0 0 0 0 0 2 0 11 1 1326.7256 Q14980-2;Q14980 Q14980-2 884 894 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 0.015557 70.728 By matching By MS/MS By matching By matching By matching By matching 1 1 655410 0 309210 0 0 0 346210 574 1121 580 2650;2651 1830 1830 1 ALQRPSAAAPQAENGPAAAPAVAAPAATEAPK TQLSLLPRALQRPSAA PAATEAPKMSNADFAK R A L P K M 14 1 1 0 0 2 2 1 0 0 1 1 0 0 6 1 1 0 0 1 0 32 1 2964.5417 B7ZKM0;Q15020;F5H0B8 B7ZKM0 883 914 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 3 0.0016332 33.153 By MS/MS By matching By matching By matching By matching By matching 1 2330500 2330500 0 0 0 0 0 575 206 581 2652 1831 1831 1 ALQTERNDLNK QRLEKLCRALQTERND TERNDLNKRVQDLSAG R A L N K R 1 1 2 1 0 1 1 0 0 0 2 1 0 0 0 0 1 0 0 0 0 11 1 1300.6735 P40222 P40222 473 483 TXLNA Alpha-taxilin yes yes 2;3 0.01176 68.536 By matching By MS/MS By MS/MS By matching By matching By matching 1 2 2 2 2 2 7765100 497830 1320600 2187100 665920 1081400 2012300 576 907 582 2653;2654;2655;2656;2657;2658;2659;2660;2661;2662;2663 1832;1833 1833 2 ALQTERNELNEK ERLEKLCRALQTERNE ERNELNEKVEVLKEQV R A L E K V 1 1 2 0 0 1 3 0 0 0 2 1 0 0 0 0 1 0 0 0 0 12 1 1443.7318 Q9NUQ3;Q9NUQ3-2 Q9NUQ3 440 451 TXLNG Gamma-taxilin yes no 3 0.019785 52.247 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 10186000 1382100 1400000 0 910270 3201200 3292700 577 1546 583 2664;2665;2666;2667;2668 1834;1835 1834 2 ALQYFHPK HAIHNDFKALQYFHPK ALQYFHPKSLTRDTSH K A L P K S 1 0 0 0 0 1 0 0 1 0 1 1 0 1 1 0 0 0 1 0 0 8 0 1002.5287 Q9H9L3 Q9H9L3 270 277 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 yes yes 2 0.0058315 107.59 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 30447000 3089000 2844800 3929800 0 9550700 11033000 578 1509 584 2669;2670;2671;2672;2673 1836;1837;1838;1839 1839 4 ALRAAAYSAQVQPVDGATR AEWREALRALRAAAYS QPVDGATRKKSQRVCR R A L T R K 6 2 0 1 0 2 0 1 0 0 1 0 0 0 1 1 1 0 1 2 0 19 1 1944.0177 Q9H7E9;Q9H7E9-2 Q9H7E9 180 198 C8orf33 UPF0488 protein C8orf33 yes no 3 0.015117 39.364 By matching By matching By matching By matching By matching By MS/MS 1 1201200 0 0 0 0 0 1201200 579 1499 585 2674 1840 1840 1 ALRGVTGPNIEK SILEEPSKALRGVTGP VTGPNIEKSVKDLQRC K A L E K S 1 1 1 0 0 0 1 2 0 1 1 1 0 0 1 0 1 0 0 1 0 12 1 1253.7092 F8VZ02;C9JGM8;C9JW67;F8W6C2;Q9NUQ6-2 F8VZ02 143 154 SPATS2L SPATS2-like protein yes no 3 0.0019784 89.43 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 10820000 0 2988400 1804300 1034500 1501500 3491200 580 246 586 2675;2676;2677;2678;2679 1841;1842;1843 1841 3 ALRIYHEQQVKTR PKVSNVKKALRIYHEQ HEQQVKTRGLEEIPVF K A L T R G 1 2 0 0 0 2 1 0 1 1 1 1 0 0 0 0 1 0 1 1 0 13 2 1640.9111 Q5UIP0-2;Q5UIP0;H7C2B5 Q5UIP0-2 2331 2343 RIF1 Telomere-associated protein RIF1 yes no 4 0.001084 86.699 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 6080100 0 812050 1646600 922960 697780 2000800 581 1201 587 2680;2681;2682;2683;2684 1844;1845;1846;1847 1845 4 ALRLNLVGEK KEKLKNEKALRLNLVG RLNLVGEKLQWFQNHL K A L E K L 1 1 1 0 0 0 1 1 0 0 3 1 0 0 0 0 0 0 0 1 0 10 1 1111.6713 Q96EY4;H0Y9X1;D6RA57;D6RE67;D6RC31 Q96EY4 45 54 TMA16 Translation machinery-associated protein 16 yes no 2 0.025545 74.841 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 32603000 0 4750500 0 174560 294030 27384000 582 615 588 2685;2686;2687;2688 1848 1848 1 ALRSDSYVELSQYR ________________ YVELSQYRDQHFRGDN K A L Y R D 1 2 0 1 0 1 1 0 0 0 2 0 0 0 0 3 0 0 2 1 0 14 1 1685.8373 E9PAR5;P52298;F8WE41 E9PAR5 8 21 NCBP2 Nuclear cap-binding protein subunit 2 yes no 3 0.010411 50.874 By matching By MS/MS By matching By matching By matching By matching 1 1 4236900 0 1226000 0 0 0 3011000 583 399 589 2689;2690 1849 1849 1 ALRTDYNASVSVPDSSGPER GKGGKNIKALRTDYNA PDSSGPERILSISADI K A L E R I 2 2 1 2 0 0 1 1 0 0 1 0 0 0 2 4 1 0 1 2 0 20 1 2120.0134 P61978-3;P61978-2;P61978;Q5T6W5;Q5T6W2 P61978-3 67 86 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 3 0.00015174 65.416 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 103230000 0 49664000 9851200 7575500 10788000 25350000 584 984 590 2691;2692;2693;2694;2695 1850;1851;1852;1853 1851 4 ALRVQQSSESSTSSPSQHEATPGAR LEEIKLEKALRVQQSS HEATPGARRLLRITKR K A L A R R 3 2 0 0 0 3 2 1 1 0 1 0 0 0 2 7 2 0 0 1 0 25 1 2597.243 B4DLG2;O75152;E9PQ61;E9PBY7 B4DLG2 428 452 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 3;4 7.4408E-10 65.189 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 1 56891000 11747000 5918300 5923000 9187800 16256000 7859500 585 97 591 2696;2697;2698;2699;2700;2701;2702;2703;2704;2705;2706;2707 1854;1855;1856;1857;1858;1859;1860;1861;1862 1859 9 ALRVQQSSESSTSSPSQHEATPGARR LEEIKLEKALRVQQSS EATPGARRLLRITKRT K A L R R L 3 3 0 0 0 3 2 1 1 0 1 0 0 0 2 7 2 0 0 1 0 26 2 2753.3441 B4DLG2;O75152;E9PQ61;E9PBY7 B4DLG2 428 453 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 4;5 0.0015802 47.564 By MS/MS By matching By matching By MS/MS By matching By MS/MS 3 2 2 2 11434000 4915800 1131700 0 2486500 0 2899600 586 97 592 2708;2709;2710;2711;2712;2713;2714;2715;2716 1863;1864;1865;1866;1867;1868 1867 6 ALSAVSAQAAAAQK PAVLPGTKALSAVSAQ AQAAAAQKNKLKEPGG K A L Q K N 7 0 0 0 0 2 0 0 0 0 1 1 0 0 0 2 0 0 0 1 0 14 0 1285.699 Q5TBP5;O00268 Q5TBP5 668 681 TAF4 Transcription initiation factor TFIID subunit 4 yes no 2 0.0011063 83.243 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 5478300 573440 1676200 0 0 1757200 1471500 587 688 593 2717;2718;2719;2720 1869;1870;1871;1872;1873 1869 5 ALSGTSPDDVQPGPSVGPPSKDK PLNPFTAKALSGTSPD VGPPSKDKDKVLPSFW K A L D K D 1 0 0 3 0 1 0 3 0 0 1 2 0 0 5 4 1 0 0 2 0 23 1 2235.1019 Q9Y314 Q9Y314 133 155 NOSIP Nitric oxide synthase-interacting protein yes yes 3 0.013718 35.992 By matching By matching By matching By matching By matching By MS/MS 1 770440 0 0 0 0 0 770440 588 1642 594 2721 1874 1874 1 ALSGTSPDDVQPGPSVGPPSKDKDK PLNPFTAKALSGTSPD PPSKDKDKVLPSFWIP K A L D K V 1 0 0 4 0 1 0 3 0 0 1 3 0 0 5 4 1 0 0 2 0 25 2 2478.2238 Q9Y314 Q9Y314 133 157 NOSIP Nitric oxide synthase-interacting protein yes yes 3;4 4.9611E-21 86.136 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 4 48344000 4388900 11471000 8319100 2681000 6834000 14650000 589 1642 595 2722;2723;2724;2725;2726;2727;2728;2729;2730;2731;2732;2733;2734;2735 1875;1876;1877;1878;1879;1880;1881;1882;1883 1878 9 ALSRQEMQEVQSSR GHNAEVRKALSRQEMQ MQEVQSSRSGRGGNFG K A L S R S 1 2 0 0 0 3 2 0 0 0 1 0 1 0 0 3 0 0 0 1 0 14 1 1647.7999 P22626;P22626-2 P22626 187 200 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 3 7.997E-86 137.62 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 1 2 2 68864000 13740000 11088000 9209700 5851300 15043000 13933000 590 863 596;597 2736;2737;2738;2739;2740;2741;2742;2743;2744;2745;2746;2747 1884;1885;1886;1887;1888;1889;1890;1891 1890 95 7 ALSSDSILSPAPDAR GPQPGLRRALSSDSIL LSPAPDARAADPAPEV R A L A R A 3 1 0 2 0 0 0 0 0 1 2 0 0 0 2 4 0 0 0 0 0 15 0 1498.7627 Q8IVT2 Q8IVT2 392 406 MISP Mitotic interactor and substrate of PLK1 yes yes 2 0.0072937 49.988 By matching By matching By matching By matching By matching By MS/MS 1 1214700 0 0 0 0 0 1214700 591 1278 598 2748 1892 1892 1 ALSSSADDASLVNASISSSVK DGDASLNKALSSSADD ASISSSVKATSPVKST K A L V K A 4 0 1 2 0 0 0 0 0 1 2 1 0 0 0 8 0 0 0 2 0 21 0 2007.996 Q9NQW6;Q9NQW6-2 Q9NQW6 272 292 ANLN Actin-binding protein anillin yes no 2 9.0443E-60 118.46 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 35395000 0 24782000 10613000 0 0 0 592 1533 599 2749;2750 1893;1894 1893 2 ALSTMDLQK QVTKALDKALSTMDLQ LSTMDLQKVSSVMDRF K A L Q K V 1 0 0 1 0 1 0 0 0 0 2 1 1 0 0 1 1 0 0 0 0 9 0 1005.5165 F8VUA2;Q9HD42;F8VVT7;F5H875 F8VUA2 99 107 CHMP1A Charged multivesicular body protein 1a yes no 2 1.9159E-06 113.62 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 1 1 101510000 17814000 13889000 12058000 0 21327000 36422000 593 541 600 2751;2752;2753;2754;2755;2756 1895;1896;1897;1898;1899 1899 5 ALTHLEMR KDTRALRKALTHLEMR ALTHLEMRRAARRPNL K A L M R R 1 1 0 0 0 0 1 0 1 0 2 0 1 0 0 0 1 0 0 0 0 8 0 969.50659 O94776;Q68DB1 O94776 619 626 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 2 0.034579 69.812 By matching By matching By matching By matching By matching By MS/MS 1 1 1 35859000 0 0 12831000 0 729150 22299000 594 754 601 2757;2758;2759 1900 1900 1 ALTPVSIAHGTPVMR VGTPLAVRALTPVSIA AHGTPVMRLSMPTQQA R A L M R L 2 1 0 0 0 0 0 1 1 1 1 0 1 0 2 1 2 0 0 2 0 15 0 1548.8446 B7Z8R4;Q15723-4;E9PCX3;Q15723-2;Q15723-3;Q15723-1;Q15723 B7Z8R4 298 312 ELF2 ETS-related transcription factor Elf-2 yes no 3 0.0020359 66.215 By matching By matching By matching By matching By matching By MS/MS 1 11204000 0 0 0 0 0 11204000 595 196 602 2760 1901 1901 1 ALTQRPDYIK KAKTLLDKALTQRPDY TQRPDYIKAVVKKAEL K A L I K A 1 1 0 1 0 1 0 0 0 1 1 1 0 0 1 0 1 0 1 0 0 10 1 1203.6612 Q9UJX3-2;Q9UJX3;F8VVT8;F8VVU6;F8VZ62 Q9UJX3-2 468 477 ANAPC7 Anaphase-promoting complex subunit 7 yes no 3 0.03392 56.013 By matching By matching By matching By matching By matching By MS/MS 1 1 3285200 0 0 0 0 1078000 2207300 596 1599 603 2761;2762 1902 1902 1 ALTSPSLLPR ________________ TSPSLLPRLTRPCICP R A L P R L 1 1 0 0 0 0 0 0 0 0 3 0 0 0 2 2 1 0 0 0 0 10 0 1053.6182 H0Y413 H0Y413 6 15 PRICKLE3 yes yes 2 0.0049765 87.258 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 2 617580000 77822000 318780000 0 0 220980000 0 597 608 604 2763;2764;2765;2766 1903;1904;1905 1905 3 ALTVAHELLCNKPEEEK TLVTTKTRALTVAHEL CNKPEEEKALLVQVVN R A L E K A 2 0 1 0 1 0 4 0 1 0 3 2 0 0 1 0 1 0 0 1 0 17 1 1979.9986 Q03701;F5H3Y6 Q03701 365 381 CEBPZ CCAAT/enhancer-binding protein zeta yes no 3 3.1514E-09 95.067 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 12363000 2846100 1787400 0 0 0 7729500 598 1037 605 2767;2768;2769 1906;1907;1908 1906 2 ALVADSHPESER HQLSKTSRALVADSHP DSHPESERISMRQSKV R A L E R I 2 1 0 1 0 0 2 0 1 0 1 0 0 0 1 2 0 0 0 1 0 12 0 1309.6262 Q01082-3;Q01082-2;Q01082 Q01082-3 1644 1655 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 3 0.010786 56.551 By matching By matching By matching By matching By matching By MS/MS 1 548460 0 0 0 0 0 548460 599 1025 606 2770 1909 1909 1 ALVAYYQK AIRQSISKALVAYYQK ALVAYYQKYVDEASKK K A L Q K Y 2 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 2 1 0 8 0 954.51747 P62249 P62249 91 98 RPS16 40S ribosomal protein S16 yes yes 2 0.020507 79.469 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 9203400 1007500 751970 0 1041100 3997000 2405900 600 986 607 2771;2772;2773;2774;2775 1910;1911;1912 1910 3 ALVDHENVISCPHLGASTK TEEPPRDRALVDHENV PHLGASTKEAQSRCGE R A L T K E 2 0 1 1 1 0 1 1 2 1 2 1 0 0 1 2 1 0 0 2 0 19 0 2047.0157 O43175;Q5SZU1;F5H634 O43175 271 289 PHGDH D-3-phosphoglycerate dehydrogenase yes no 3;4 0.00032227 67.252 By MS/MS By matching By MS/MS By matching By matching By MS/MS 2 1 2 26375000 4443100 0 5369800 0 0 16562000 601 711 608 2776;2777;2778;2779;2780 1913;1914;1915;1916 1915 3 ALVNCQYSSATFSTGERK RARALPDRALVNCQYS TFSTGERKRRPHGDRK R A L R K R 2 1 1 0 1 1 1 1 0 0 1 1 0 1 0 3 2 0 1 1 0 18 1 2017.9527 Q9NPD3;E9PI41 Q9NPD3 70 87 EXOSC4 Exosome complex component RRP41 yes no 3 0.00079382 59.606 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3827900 378370 0 397940 0 1053500 1998000 602 1526 609 2781;2782;2783;2784 1917 1917 1 ALVNHSGLSAPVPR PTADGQTRALVNHSGL GLSAPVPRGRKGKKVK R A L P R G 2 1 1 0 0 0 0 1 1 0 2 0 0 0 2 2 0 0 0 2 0 14 0 1416.7837 Q9P2D1 Q9P2D1 1678 1691 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 3 0.0054505 54.09 By matching By matching By matching By matching By matching By MS/MS 1 1 2462000 0 605610 0 0 0 1856400 603 1578 610 2785;2786 1918 1918 1 ALVNTTGYQNDSPLHDAAK VELLLQHKALVNTTGY SPLHDAAKNGHVDIVK K A L A K N 3 0 2 2 0 1 0 1 1 0 2 1 0 0 1 1 2 0 1 1 0 19 0 2013.9756 E7EUI3;Q99728 E7EUI3 341 359 BARD1 BRCA1-associated RING domain protein 1 yes no 3 1.8893E-38 111.77 By MS/MS By matching By matching By matching By matching By matching 1 8103200 8103200 0 0 0 0 0 604 386 611 2787 1919 1919 1 ALVRECLAETER KRGIIHARALVRECLA ECLAETERNART____ R A L E R N 2 2 0 0 1 0 3 0 0 0 2 0 0 0 0 0 1 0 0 1 0 12 1 1445.7297 O75956 O75956 111 122 CDK2AP2 Cyclin-dependent kinase 2-associated protein 2 yes yes 3 0.0018409 80.17 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 6581500 0 0 1766400 0 0 4815100 605 752 612 2788;2789 1920;1921;1922 1922 3 ALVSGKPAESSAVAATEK SIIMSSQKALVSGKPA SAVAATEKKAVTPAPP K A L E K K 5 0 0 0 0 0 2 1 0 0 1 2 0 0 1 3 1 0 0 2 0 18 1 1714.9101 O95182 O95182 75 92 NDUFA7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 yes yes 3 0.0047183 47.223 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 2907200 645610 554360 0 417540 0 1289700 606 763 613 2790;2791;2792;2793 1923;1924 1924 2 ALVTLSSGDMRR DISEDGMKALVTLSSG LSSGDMRRALNILQST K A L R R A 1 2 0 1 0 0 0 1 0 0 2 0 1 0 0 2 1 0 0 1 0 12 1 1304.6871 P40937;F8W9B4;P40937-2 P40937 204 215 RFC5 Replication factor C subunit 5 yes no 3 0.0024908 64.64 By matching By matching By matching By matching By matching By MS/MS 1 2176200 0 0 0 0 0 2176200 607 909 614 2794 1925 1925 1 ALWFQGR MVDHCLKKALWFQGRC KALWFQGRCVKVDLSE K A L G R C 1 1 0 0 0 1 0 1 0 0 1 0 0 1 0 0 0 1 0 0 0 7 0 876.46062 P43243;A8MXP9;D6REM6;H0Y8T4;B3KM87;P43243-2 P43243 556 562 MATR3 Matrin-3 yes no 2 0.040642 79.454 By matching By matching By matching By matching By matching By MS/MS 1 5766600 0 0 0 0 0 5766600 608 52 615 2795 1926 1926 1 ALYSTAMESIQGEAR TRRPAPQKALYSTAME ESIQGEARRGGTMETD K A L A R R 3 1 0 0 0 1 2 1 0 1 1 0 1 0 0 2 1 0 1 0 0 15 0 1625.7719 Q99755-2;Q99755-3;A6PW57;Q99755;Q99755-4;B4DY52;A2A3N6 Q99755-2 345 359 PIP5K1A;PIPSL Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha;Putative PIP5K1A and PSMD4-like protein yes no 2 0.0084726 48.391 By matching By matching By matching By matching By matching By MS/MS 1 4276400 0 0 0 0 0 4276400 609 32 616 2796 1927 1927 1 ALYYQDEPQK ADRHSFLKALYYQDEP YYQDEPQKKNKGDPMN K A L Q K K 1 0 0 1 0 2 1 0 0 0 1 1 0 0 1 0 0 0 2 0 0 10 0 1253.5928 Q96IZ5-2;Q96IZ5 Q96IZ5-2 170 179 RBM41 RNA-binding protein 41 yes no 2 0.0070719 84.817 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 3120600 298450 467640 524770 0 734450 1095300 610 1398 617 2797;2798;2799;2800;2801 1928;1929;1930 1929 3 AMAEWVKQQAER LRDVNHEKAMAEWVKQ WVKQQAEREAEKEQKR K A M E R E 3 1 0 0 0 2 2 0 0 0 0 1 1 0 0 0 0 1 0 1 0 12 1 1445.7085 Q6IQ49-2;C9JIQ2;Q6IQ49 Q6IQ49-2 105 116 SDE2 Protein SDE2 homolog yes no 3 0.014798 55.261 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 3418600 824540 417210 0 0 795370 1381500 611 249 618 2802;2803;2804;2805 1931 1931 1 AMDLAQAGSTVESK LANTLKSKAMDLAQAG AGSTVESKIYDTLQWQ K A M S K I 3 0 0 1 0 1 1 1 0 0 1 1 1 0 0 2 1 0 0 1 0 14 0 1406.6711 Q5JTH9-2;E9PCK7;Q5JTH9;F5H456 Q5JTH9-2 500 513 RRP12 RRP12-like protein yes no 2 1.2556E-69 133.47 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 12427000 1282100 1714100 807510 729580 3258700 4634500 612 414 619 2806;2807;2808;2809;2810;2811 1932;1933;1934;1935;1936;1937 1934 6 AMDSSLQAR ________________ MDSSLQARLFPGLAIK M A M A R L 2 1 0 1 0 1 0 0 0 0 1 0 1 0 0 2 0 0 0 0 0 9 0 977.46003 B7Z6Q6;Q99661;Q5JR91 B7Z6Q6 2 10 KIF2C Kinesin-like protein KIF2C yes no 2 0.0019994 105.52 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 37830000 6145800 4364800 6202300 2503500 6591500 12022000 613 193 620 2812;2813;2814;2815;2816;2817;2818 1938;1939;1940;1941;1942;1943 1942 6 AMDTPKPAGGDEK KRTPSVGKAMDTPKPA KPAGGDEKDMKAFMGT K A M E K D 2 0 0 2 0 0 1 2 0 0 0 2 1 0 2 0 1 0 0 0 0 13 1 1315.6078 P46013;F5H4V4;P46013-2 P46013 2265 2277 MKI67 Antigen KI-67 no no 2;3 0.0013983 78.964 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 2 2 2 2 37608000 903000 7948800 18598000 2033000 2188500 5937200 614 919;920 621 2819;2820;2821;2822;2823;2824;2825;2826;2827;2828;2829 1944;1945;1946;1947 1945 4 AMDTPKPAVSDEK KRTPSAGKAMDTPKPA KPAVSDEKNINTFVET K A M E K N 2 0 0 2 0 0 1 0 0 0 0 2 1 0 2 1 1 0 0 1 0 13 1 1387.6653 P46013;F5H4V4;P46013-2 P46013 2386 2398 MKI67 Antigen KI-67 no no 2;3 9.8645E-16 111.31 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 3 3 2 2 3 94847000 8644000 17948000 13082000 5137000 17320000 32716000 615 919;920 622;623 2830;2831;2832;2833;2834;2835;2836;2837;2838;2839;2840;2841;2842;2843;2844;2845;2846;2847 1948;1949;1950;1951;1952;1953;1954;1955;1956;1957;1958;1959 1954 103 12 AMDTPKPAVSDEKNINTFVETPVQK KRTPSAGKAMDTPKPA FVETPVQKLDLLGNLP K A M Q K L 2 0 2 2 0 1 2 0 0 1 0 3 1 1 3 1 3 0 0 3 0 25 2 2758.3847 P46013;F5H4V4;P46013-2 P46013 2386 2410 MKI67 Antigen KI-67 no no 3;4 3.7944E-250 157.59 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 2 2 388110000 118100000 27570000 161310000 22813000 10974000 47340000 616 919;920 624;625 2848;2849;2850;2851;2852;2853;2854;2855;2856;2857;2858;2859;2860 1960;1961;1962;1963;1964;1965;1966;1967;1968;1969;1970;1971;1972;1973 1968 103 14 AMESTESRHYPVFENPK FDKSCSDRAMESTESR YPVFENPKQGKLRTKV R A M P K Q 1 1 1 0 0 0 3 0 1 0 0 1 1 1 2 2 1 0 1 1 0 17 1 2020.9313 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 980 996 ADAR Double-stranded RNA-specific adenosine deaminase no no 3;4 0.0024904 77.726 By MS/MS By MS/MS By matching By matching By matching By MS/MS 2 2 1 1 1 2 71496000 6568000 12221000 5714600 6672400 10186000 30133000 617 352;968 626 2861;2862;2863;2864;2865;2866;2867;2868;2869 1974;1975;1976 1975 3 AMEVDIEERPK PLRKRKVKAMEVDIEE VDIEERPKELVRKPYV K A M P K E 1 1 0 1 0 0 3 0 0 1 0 1 1 0 1 0 0 0 0 1 0 11 1 1315.6442 Q9Y3C1;D6RIC3;E7ERV7;E7ESQ0;D6RGD3 Q9Y3C1 75 85 NOP16 Nucleolar protein 16 yes no 2;3 9.4885E-08 108.31 By MS/MS By matching By matching By matching By MS/MS By MS/MS 3 1 2 2 2 10432000 2595200 0 1187000 1233400 2263200 3153200 618 1645 627 2870;2871;2872;2873;2874;2875;2876;2877;2878;2879 1977;1978;1979;1980;1981 1978 5 AMHQAQTMEGCSSPMVVK AMAQTAIKAMHQAQTM CSSPMVVKFADTQKDK K A M V K F 2 0 0 0 1 2 1 1 1 0 0 1 3 0 1 2 1 0 0 2 0 18 0 1990.8733 Q92879-2;Q92879-3;F8W940;Q92879;Q92879-4;G5EA30 Q92879-2 167 184 CELF1 CUGBP Elav-like family member 1 yes no 3 0.034441 34.202 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2306100 327460 0 0 0 668760 1309800 619 560 628 2880;2881;2882 1982 1982 1 AMHTPKPAVGEEK KQTPSAGKAMHTPKPA KPAVGEEKDINTFLGT K A M E K D 2 0 0 0 0 0 2 1 1 0 0 2 1 0 2 0 1 0 0 1 0 13 1 1393.7024 P46013;F5H4V4;P46013-2 P46013 1781 1793 MKI67 Antigen KI-67 no no 2;3 2.6043E-06 100.73 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 1 2 2 65185000 249670 8869400 18519000 4790300 6674200 26082000 620 919;920 629 2883;2884;2885;2886;2887;2888;2889;2890;2891;2892 1983;1984;1985;1986;1987 1985 5 AMHTPKPAVGEEKDINTFLGTPVQK KQTPSAGKAMHTPKPA FLGTPVQKLDQPGNLP K A M Q K L 2 0 1 1 0 1 2 2 1 1 1 3 1 1 3 0 3 0 0 2 0 25 2 2707.4003 P46013;F5H4V4;P46013-2 P46013 1781 1805 MKI67 Antigen KI-67 no no 4 0.035777 29.281 By MS/MS By matching By matching By matching By matching By matching 1 9780200 9780200 0 0 0 0 0 621 919;920 630 2893 1988 1988 1 AMHTPKPAVSGEK KRTPSAGKAMHTPKPA KPAVSGEKNIYAFMGT K A M E K N 2 0 0 0 0 0 1 1 1 0 0 2 1 0 2 1 1 0 0 1 0 13 1 1351.6918 P46013;F5H4V4;P46013-2 P46013 1537 1549 MKI67 Antigen KI-67 no no 3 0.0020138 82.774 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 21904000 0 8511900 9453800 1842300 2096000 0 622 919;920 631 2894;2895;2896;2897 1989;1990;1991 1991 3 AMHTPKPSVGEEK NLMPSAGKAMHTPKPS KPSVGEEKDIIIFVGT K A M E K D 1 0 0 0 0 0 2 1 1 0 0 2 1 0 2 1 1 0 0 1 0 13 1 1409.6973 P46013;F5H4V4;P46013-2 P46013 1295 1307 MKI67 Antigen KI-67 no no 3 1.527E-10 98.368 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 2 1 1 1 2 42118000 4819400 9888900 20391000 6168600 849410 0 623 919;920 632 2898;2899;2900;2901;2902;2903;2904 1992;1993;1994;1995;1996;1997 1997 6 AMKPWIQPK KTVYQHQKAMKPWIQP MKPWIQPKTKVIPYVR K A M P K T 1 0 0 0 0 1 0 0 0 1 0 2 1 0 2 0 0 1 0 0 0 9 1 1097.6056 CON__P02663 CON__P02663 189 197 yes yes 2 5.7244E-19 127.46 By MS/MS By MS/MS By matching By MS/MS By matching By matching 2 1 1 14525000 6780700 2241900 0 5502500 0 0 + 624 289 633 2905;2906;2907;2908 1998;1999;2000 1998 3 AMLRVQPEAQAK ________________ VQPEAQAKVDVFREDL M A M A K V 3 1 0 0 0 2 1 0 0 0 1 1 1 0 1 0 0 0 0 1 0 12 1 1340.7235 H0YNE3;Q06323;A6NJG9 H0YNE3 2 13 PSME1 Proteasome activator complex subunit 1 yes no 2 0.0022731 89.301 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 2 4347500 0 0 2031000 740360 0 1576100 625 26 634 2909;2910;2911;2912 2001;2002;2003 2001 3 AMLTPKPAGGDEK KLTPSAGKAMLTPKPA KPAGGDEKDIKAFMGT K A M E K D 2 0 0 1 0 0 1 2 0 0 1 2 1 0 2 0 1 0 0 0 0 13 1 1313.6649 P46013;F5H4V4;P46013-2 P46013 1173 1185 MKI67 Antigen KI-67 no no 2;3 0.001197 93.348 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 3 3 2 235150000 18106000 29839000 67259000 18624000 50487000 50831000 626 919;920 635 2913;2914;2915;2916;2917;2918;2919;2920;2921;2922;2923;2924;2925;2926;2927 2004;2005;2006;2007;2008;2009;2010;2011;2012;2013 2006 10 AMNLDQVSKDK REYQVGIKAMNLDQVS LDQVSKDKALQSMASM K A M D K A 1 0 1 2 0 1 0 0 0 0 1 2 1 0 0 1 0 0 0 1 0 11 1 1247.618 Q99594;H7C4A7 Q99594 111 121 TEAD3 Transcriptional enhancer factor TEF-5 yes no 3 0.0063361 70.412 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 6833700 708140 656280 1113000 931610 1427400 1997300 627 1429 636 2928;2929;2930;2931;2932;2933 2014;2015;2016;2017 2015 4 AMNVLTEAEER LGRNVNMRAMNVLTEA VLTEAEERYNDLMKKK R A M E R Y 2 1 1 0 0 0 3 0 0 0 1 0 1 0 0 0 1 0 0 1 0 11 0 1261.5973 O95347-2;O95347 O95347-2 987 997 SMC2 Structural maintenance of chromosomes protein 2 yes no 2 0.021161 55.04 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 5648700 628250 766620 0 762560 0 3491300 628 770 637 2934;2935;2936;2937 2018;2019 2019 2 AMPVTKPITVTK SRPMPVTKAMPVTKPI TKPITVTKSVPVTKPV K A M T K S 1 0 0 0 0 0 0 0 0 1 0 2 1 0 2 0 3 0 0 2 0 12 1 1284.7475 Q96KM6 Q96KM6 251 262 ZNF512B Zinc finger protein 512B yes yes 3 7.0887E-64 139.76 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 67043000 6198800 9336200 9527600 8893300 14631000 18456000 629 1402 638 2938;2939;2940;2941;2942;2943 2020;2021;2022;2023;2024 2022 5 AMSTLVPQGGPVLCR RNGYDLAKAMSTLVPQ QGGPVLCRDEMEEWSA K A M C R D 1 1 0 0 1 1 0 2 0 0 2 0 1 0 2 1 1 0 0 2 0 15 0 1584.8116 O94776;Q68DB1 O94776 248 262 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 2 1.1157E-08 98.942 By matching By MS/MS By matching By matching By matching By matching 1 70417000 0 70417000 0 0 0 0 630 754 639 2944 2025;2026 2025 2 AMTILLEEAK AKQDAAMKAMTILLEE TILLEEAKAKDSGKSE K A M A K A 2 0 0 0 0 0 2 0 0 1 2 1 1 0 0 0 1 0 0 0 0 10 0 1117.6053 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 565 574 ADAR Double-stranded RNA-specific adenosine deaminase no no 2 1.1689E-29 130.98 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 51865000 0 0 0 51152000 0 712610 631 352;968 640 2945;2946;2947 2027;2028 2028 2 AMTILLEEAKAK AKQDAAMKAMTILLEE LLEEAKAKDSGKSEES K A M A K D 3 0 0 0 0 0 2 0 0 1 2 2 1 0 0 0 1 0 0 0 0 12 1 1316.7374 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 565 576 ADAR Double-stranded RNA-specific adenosine deaminase no no 2;3 1.7141E-290 194.48 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 2 2 274370000 33210000 14392000 99966000 7900700 29249000 89650000 632 352;968 641 2948;2949;2950;2951;2952;2953;2954;2955;2956 2029;2030;2031;2032;2033;2034;2035;2036;2037 2030 9 AMTILLEEAKAKDSGK AKQDAAMKAMTILLEE AKAKDSGKSEESSHYS K A M G K S 3 0 0 1 0 0 2 1 0 1 2 3 1 0 0 1 1 0 0 0 0 16 2 1703.9128 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 565 580 ADAR Double-stranded RNA-specific adenosine deaminase no no 3;4 9.3559E-64 128.71 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 5 2 2 3 1 2 149690000 30719000 3932800 66434000 31993000 1788200 14821000 633 352;968 642;643 2957;2958;2959;2960;2961;2962;2963;2964;2965;2966;2967;2968;2969;2970;2971 2038;2039;2040;2041;2042;2043;2044;2045;2046;2047 2046 10 AMVASGSELGK LATGDMLRAMVASGSE ASGSELGKKLKATMDA R A M G K K 2 0 0 0 0 0 1 2 0 0 1 1 1 0 0 2 0 0 0 1 0 11 0 1048.5223 G3V213;F8VZG5;P54819-3;E7EWH4;P54819-5;P54819-2;F8W1A4;P54819;P54819-4;P54819-6 G3V213 52 62 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes no 2 0.014835 59.265 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2655500 0 428010 228810 0 932550 1066200 634 393 644 2972;2973;2974;2975 2048 2048 1 AMVEYEIDLQKMPLGK FDVESMKKAMVEYEID LQKMPLGKLSKRQIQA K A M G K L 1 0 0 1 0 1 2 1 0 1 2 2 2 0 1 0 0 0 1 1 0 16 1 1863.9474 P09874 P09874 685 700 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 0.0046382 51.004 By matching By MS/MS By matching By matching By matching By matching 1 45869000 0 45869000 0 0 0 0 635 815 645 2976 2049 2049 1 ANAEEMTKYHSDDYIK MEIYRPHKANAEEMTK YHSDDYIKFLRSIRPD K A N I K F 2 0 1 2 0 0 2 0 1 1 0 2 1 0 0 1 1 0 2 0 0 16 1 1913.8465 Q13547;Q5TEE2 Q13547 59 74 HDAC1 Histone deacetylase 1 yes no 3;4 2.0796E-11 97.203 By matching By matching By matching By matching By matching By MS/MS 2 1 1 1 2 18981000 0 1544000 2440400 325350 256600 14414000 636 1086 646 2977;2978;2979;2980;2981;2982;2983 2050;2051 2050 2 ANASNSPSSLRLLNEPQK NVYELFEKANASNSPS RLLNEPQKRDCGSTGA K A N Q K R 2 1 3 0 0 1 1 0 0 0 3 1 0 0 2 4 0 0 0 0 0 18 1 1924.9967 Q5T5X7 Q5T5X7 159 176 BEND3 BEN domain-containing protein 3 yes yes 3 0.0016599 57.788 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 10854000 0 1986100 2133400 930410 2184800 3619800 637 1192 647 2984;2985;2986;2987;2988 2052;2053;2054;2055;2056;2057 2056 6 ANELLQR IIVAELQKANELLQRS KANELLQRSRQVQNKT K A N Q R S 1 1 1 0 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 7 0 842.46102 E9PF10;O75694-2;B4DLT2;O75694 E9PF10 813 819 NUP155 Nuclear pore complex protein Nup155 yes no 2 0.0011368 113.89 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 7821900 421930 2745700 3283700 0 505500 865090 638 100 648 2989;2990;2991;2992;2993 2058;2059;2060 2060 3 ANELPQPPVPEPANAGK SPPSKRPKANELPQPP PEPANAGKRKVREFNF K A N G K R 3 0 2 0 0 1 2 1 0 0 1 1 0 0 5 0 0 0 0 1 0 17 0 1727.8842 P78347-2;P78347-4;P78347-3;B4DH52;P78347 P78347-2 286 302 GTF2I General transcription factor II-I yes no 2 0.00019204 85.563 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 14933000 0 0 3724100 0 1779000 9429500 639 90 649 2994;2995;2996 2061;2062 2061 2 ANGTSALTAQNGK SPRPQAPKANGTSALT ALTAQNGKAAKNSEEE K A N G K A 3 0 2 0 0 1 0 2 0 0 1 1 0 0 0 1 2 0 0 0 0 13 0 1231.6157 Q14978;Q14978-3;Q14978-2 Q14978 546 558 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.036361 42.469 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1487000 0 930850 437790 0 118360 0 640 1120 650 2997;2998;2999 2063 2063 1 ANGTTVHVGIHPSK IERVQREKANGTTVHV HVGIHPSKVVITRLKL K A N S K V 1 0 1 0 0 0 0 2 2 1 0 1 0 0 1 1 2 0 0 2 0 14 0 1416.7474 E5RIT6;Q9UNX3;P61254 E5RIT6 90 103 RPL26L1;RPL26 60S ribosomal protein L26-like 1;60S ribosomal protein L26 yes no 3 0.0019486 64.244 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 4959900 571680 1069800 0 0 1606100 1712300 641 343 651 3000;3001;3002;3003 2064;2065 2064 2 ANILGLAAGQR KQMESFLKANILGLAA LGLAAGQRCGAS____ K A N Q R C 3 1 1 0 0 1 0 2 0 1 2 0 0 0 0 0 0 0 0 0 0 11 0 1082.6196 Q14807;B7Z265;H3BRB3 Q14807 651 661 KIF22 Kinesin-like protein KIF22 yes no 2 3.0955E-05 102.95 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 100750000 0 69407000 0 0 0 31342000 642 1115 652 3004;3005 2066;2067 2066 2 ANILGLAAGQRCGAS KQMESFLKANILGLAA AGQRCGAS________ K A N A S - 4 1 1 0 1 1 0 3 0 1 2 0 0 0 0 1 0 0 0 0 0 15 1 1457.7409 Q14807;B7Z265;H3BRB3 Q14807 651 665 KIF22 Kinesin-like protein KIF22 yes no 2 0.0013808 72.662 By matching By MS/MS By matching By matching By matching By matching 1 5618500 0 5618500 0 0 0 0 643 1115 653 3006 2068 2068 1 ANLEESFPRGGTRK ________________ FPRGGTRKIHKPEKAF M A N R K I 1 2 1 0 0 0 2 2 0 0 1 1 0 1 1 1 1 0 0 0 0 14 2 1560.8009 Q14690;F5H7X0 Q14690 2 15 PDCD11 Protein RRP5 homolog yes no 3 0.014391 48.044 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 35140000 8002900 4763100 4029700 3107900 7786600 7449800 644 1112 654 3007;3008;3009;3010;3011;3012 2069;2070;2071 2069 3 ANLENKLLGK IDSWFEEKANLENKLL LENKLLGKNGTGGLFQ K A N G K N 1 0 2 0 0 0 1 1 0 0 3 2 0 0 0 0 0 0 0 0 0 10 1 1098.6397 Q9ULW0;Q96RR5 Q9ULW0 39 48 TPX2;HCA90 Targeting protein for Xklp2 yes no 2 3.1638E-138 166.86 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 22788000 1700700 6334700 4876500 1254300 2136300 6485100 645 1611 655 3013;3014;3015;3016;3017;3018 2072;2073;2074;2075 2074 4 ANLQQAIVTPLKPVDNTYYK QGKTPLRKANLQQAIV PVDNTYYKEAEKENLV K A N Y K E 2 0 2 1 0 2 0 0 0 1 2 2 0 0 2 0 2 0 2 2 0 20 1 2275.2212 Q9ULW0;Q96RR5 Q9ULW0 64 83 TPX2;HCA90 Targeting protein for Xklp2 yes no 2;3 1.3259E-172 154.52 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 325960000 0 145930000 0 0 0 180030000 646 1611 656 3019;3020;3021 2076;2077;2078 2077 3 ANLQQAIVTPLKPVDNTYYKEAEK QGKTPLRKANLQQAIV TYYKEAEKENLVEQSI K A N E K E 3 0 2 1 0 2 2 0 0 1 2 3 0 0 2 0 2 0 2 2 0 24 2 2732.4385 Q9ULW0;Q96RR5 Q9ULW0 64 87 TPX2;HCA90 Targeting protein for Xklp2 yes no 4 0.003419 46.595 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 51774000 15225000 8146200 0 28403000 0 0 647 1611 657 3022;3023;3024 2079;2080 2079 2 ANMLQEYSK SQASSSDKANMLQEYS NMLQEYSKFLQQALDR K A N S K F 1 0 1 0 0 1 1 0 0 0 1 1 1 0 0 1 0 0 1 0 0 9 0 1082.5066 Q9UQR1 Q9UQR1 599 607 ZNF148 Zinc finger protein 148 yes yes 2 0.014686 77.533 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 3883700 0 1262100 0 0 792440 1829200 648 1626 658 3025;3026;3027 2081;2082 2082 2 ANNSPALTGNSQPQHQAAAAAAQQQQQCGGGGATKPAVSGK ________________ TKPAVSGKQGNVLPLW M A N G K Q 10 0 3 0 1 8 0 6 1 0 1 2 0 0 3 3 2 0 0 1 0 41 1 3956.8896 Q5VTL8;Q5VTL8-2 Q5VTL8 2 42 PRPF38B Pre-mRNA-splicing factor 38B yes no 4 1.3776E-22 43.602 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 1 2 1 1 72927000 0 46853000 5365300 14596000 1097300 5014900 649 1203 659;660 3028;3029;3030;3031;3032;3033;3034 2083;2084;2085 2085 3 ANQVNGNAVQLK ________________ NGNAVQLKEEEEPMDT M A N L K E 2 0 3 0 0 2 0 1 0 0 1 1 0 0 0 0 0 0 0 2 0 12 0 1254.668 O43390;O43390-2;Q2L7G6 O43390 2 13 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes no 2 0.00097347 84.507 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 6426900 591330 2145100 734470 0 977300 1978600 650 715 661 3035;3036;3037;3038;3039 2086;2087;2088 2088 3 ANRWFGVAPPK DNRDVAGKANRWFGVA WFGVAPPKSGKMNMNI K A N P K S 2 1 1 0 0 0 0 1 0 0 0 1 0 1 2 0 0 1 0 1 0 11 1 1241.6669 Q8IWZ8;B4DVK3;Q8IWZ8-2 Q8IWZ8 14 24 SUGP1 SURP and G-patch domain-containing protein 1 yes no 3 4.3516E-05 101.38 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 8578200 2408600 1796400 0 1414100 0 2959200 651 1283 662 3040;3041;3042;3043 2089;2090;2091;2092 2092 4 ANSEASSSEGQSSLSSLEK VGGGGFRRANSEASSS SSLSSLEKLMMDWNEA R A N E K L 2 0 1 0 0 1 3 1 0 0 2 1 0 0 0 8 0 0 0 0 0 19 0 1896.8549 Q5TGY3 Q5TGY3 1185 1203 AHDC1 AT-hook DNA-binding motif-containing protein 1 yes yes 2 0.012144 40.384 By matching By matching By matching By matching By matching By MS/MS 1 666000 0 0 0 0 0 666000 652 1199 663 3044 2093 2093 1 APAMQPAEIQFAQR ________________ AEIQFAQRLASSEKGI M A P Q R L 4 1 0 0 0 3 1 0 0 1 0 0 1 1 2 0 0 0 0 0 0 14 0 1556.7769 Q14684-2;Q14684 Q14684-2 2 15 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 2 0 228.62 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 2 2 298410000 36322000 52215000 36483000 26992000 66375000 80021000 653 1111 664;665 3045;3046;3047;3048;3049;3050;3051;3052;3053;3054 2094;2095;2096;2097;2098;2099;2100 2096 134 7 APAMQPAEIQFAQRLASSEK ________________ QRLASSEKGIRDRAVK M A P E K G 5 1 0 0 0 3 2 0 0 1 1 1 1 1 2 2 0 0 0 0 0 20 1 2172.0997 Q14684-2;Q14684 Q14684-2 2 21 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 3 4.4856E-37 108.14 By matching By matching By matching By MS/MS By matching By matching 1 11874000 0 0 0 11874000 0 0 654 1111 666 3055 2101 2101 134 1 APILIATDVASR LNEFRSGKAPILIATD IATDVASRGLDVEDVK K A P S R G 3 1 0 1 0 0 0 0 0 2 1 0 0 0 1 1 1 0 0 1 0 12 0 1225.703 P17844;E7ETL9;Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 390 401 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 2 0.038832 44.829 By matching By MS/MS By matching By matching By matching By matching 1 1 9307100 0 7429900 0 1877200 0 0 655 1361;629;853 667 3056;3057 2102 2102 1 APLKSVGPDFGK KRSERLQRAPLKSVGP SVGPDFGKKRLGLPGD R A P G K K 1 0 0 1 0 0 0 2 0 0 1 2 0 1 2 1 0 0 0 1 0 12 1 1214.6659 P78527;E7EUY0;P78527-2 P78527 2691 2702 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 0.0027753 73.435 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 3887600 403650 554520 0 586650 1013700 1329000 656 1012 668 3058;3059;3060;3061;3062 2103 2103 1 APSTYGGGLSVSSSR VLAGGSCRAPSTYGGG GLSVSSSRFSSGGACG R A P S R F 1 1 0 0 0 0 0 3 0 0 1 0 0 0 1 5 1 0 1 1 0 15 0 1424.6896 P02533;CON__P02533 P02533 42 56 KRT14 Keratin, type I cytoskeletal 14 yes no 2 0.00057463 82.578 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 5260600 0 695450 1000200 1286700 1017200 1261100 + 657 286 669 3063;3064;3065;3066;3067 2104;2105 2105 2 APSVPAAEPEYPKGIR ________________ PEYPKGIRAVLLGPPG M A P I R A 3 1 0 0 0 0 2 1 0 1 0 1 0 0 4 1 0 0 1 1 0 16 1 1680.8835 G3V213;F8VZG5;P54819-3;E7EWH4;P54819-5;P54819-2;F8W1A4;P54819;F8VPP1;F8VY04 G3V213 2 17 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes no 3 0.033934 38.116 By matching By matching By matching By matching By MS/MS By matching 1 1632200 0 0 0 0 1632200 0 658 393 670 3068 2106 2106 1 AQAAAPASVPAQAPK AKAKDQTKAQAAAPAS SVPAQAPKRTQAPTKA K A Q P K R 7 0 0 0 0 2 0 0 0 0 0 1 0 0 3 1 0 0 0 1 0 15 0 1376.7412 P47914 P47914 135 149 RPL29 60S ribosomal protein L29 yes yes 2 1.1151E-08 98.943 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 83438000 16179000 13008000 10828000 8927900 18064000 16430000 659 930 671 3069;3070;3071;3072;3073;3074 2107;2108;2109;2110;2111;2112 2109 6 AQALEDLAGFK QLQTPKEKAQALEDLA LEDLAGFKELFQTPGH K A Q F K E 3 0 0 1 0 1 1 1 0 0 2 1 0 1 0 0 0 0 0 0 0 11 0 1161.603 P46013;F5H4V4;P46013-2 P46013 1218 1228 MKI67 Antigen KI-67 no no 2 9.2367E-08 108.35 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 177630000 0 109640000 0 67985000 0 0 660 919;920 672 3075;3076 2113;2114;2115 2115 3 AQAVSEEEEEEEGK SKEAPKRKAQAVSEEE EEEEEEGKSSSPKKKI K A Q G K S 2 0 0 0 0 1 7 1 0 0 0 1 0 0 0 1 0 0 0 1 0 14 0 1562.6584 G3V529;Q9GZR7;F5H4J5;Q4V9L5 G3V529 35 48 DDX24 ATP-dependent RNA helicase DDX24 yes no 2 1.1354E-05 94.532 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 23502000 0 3104500 4095500 2998200 6332600 6971000 661 588 673 3077;3078;3079;3080;3081 2116;2117;2118;2119;2120 2116 5 AQAVSEEEEEEEGKSSSPKK SKEAPKRKAQAVSEEE GKSSSPKKKIKLKKSK K A Q K K K 2 0 0 0 0 1 7 1 0 0 0 3 0 0 1 4 0 0 0 1 0 20 2 2176.9972 G3V529;Q9GZR7;F5H4J5;Q4V9L5 G3V529 35 54 DDX24 ATP-dependent RNA helicase DDX24 yes no 3;4 8.8966E-11 89.374 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 1 1 1 1 1 12097000 1829700 991750 2710000 2784200 2684600 1096900 662 588 674 3082;3083;3084;3085;3086;3087;3088 2121;2122;2123;2124;2125 2122 5 AQDQGEKENPMR ________________ GEKENPMRELRIRKLC M A Q M R E 1 1 1 1 0 2 2 1 0 0 0 1 1 0 1 0 0 0 0 0 0 12 1 1401.6307 P62913 P62913 2 13 RPL11 60S ribosomal protein L11 yes yes 2 0.01541 57.106 By matching By matching By matching By matching By MS/MS By matching 1 1 1 2538400 0 0 0 483610 1279900 774890 663 998 675 3089;3090;3091 2126 2126 1 AQEEYEQIQAK KKKTSNQKAQEEYEQI EYEQIQAKRAAKKQEF K A Q A K R 2 0 0 0 0 3 3 0 0 1 0 1 0 0 0 0 0 0 1 0 0 11 0 1335.6307 Q9P031 Q9P031 172 182 CCDC59 Thyroid transcription factor 1-associated protein 26 yes yes 2 1.5856E-29 125.23 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 23658000 5383000 3115400 3622600 2690600 4645700 4200800 664 1571 676 3092;3093;3094;3095;3096;3097;3098 2127;2128;2129;2130;2131;2132;2133;2134;2135;2136 2133 10 AQELGHSQSALASAQR LQGQLEEKAQELGHSQ SALASAQRELAAFRTK K A Q Q R E 4 1 0 0 0 3 1 1 1 0 2 0 0 0 0 3 0 0 0 0 0 16 0 1652.823 Q14980-2;Q14980;F5H2L0;H0YFY6 Q14980-2 1175 1190 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 4.3466E-18 102.39 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 31659000 4777100 5582200 2805000 2076900 5066900 11351000 665 1121 677 3099;3100;3101;3102;3103;3104;3105 2137;2138;2139;2140;2141;2142;2143 2140 7 AQEPESGLSEETQVK GSKDHNIRAQEPESGL LSEETQVKCLMDQATD R A Q V K C 1 0 0 0 0 2 4 1 0 0 1 1 0 0 1 2 1 0 0 1 0 15 0 1630.7686 P78527;E7EUY0;P78527-2 P78527 4091 4105 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 9.8992E-85 148.18 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 2 34660000 5072400 5945200 2840400 3003800 6560500 11237000 666 1012 678 3106;3107;3108;3109;3110;3111;3112;3113;3114 2144;2145;2146;2147;2148;2149;2150;2151 2147 6 AQETEAAPSQAPADEPEPESAAAQSQENQDTRPKVK ADTKVNTKAQETEAAP QDTRPKVKAKKARKVK K A Q V K A 8 1 1 2 0 5 6 0 0 0 0 2 0 0 5 3 2 0 0 1 0 36 2 3804.7674 Q9UNF1;Q9UNF1-2;H7BXW3;Q5H907;Q5H909 Q9UNF1 138 173 MAGED2 Melanoma-associated antigen D2 yes no 4 7.1687E-05 30.007 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4841400 0 0 1592900 0 1081300 2167200 667 1614 679 3115;3116;3117 2152 2152 1 AQGQESDSSETSVRGPR LKQTDQPKAQGQESDS ETSVRGPRIKHVCRRA K A Q P R I 1 2 0 1 0 2 2 2 0 0 0 0 0 0 1 4 1 0 0 1 0 17 1 1789.8191 Q03164-2;Q03164;E9PQG7;E9PR05;H3BLZ0;H7C5W4 Q03164-2 1051 1067 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 3 0.021561 39.629 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 3142400 474380 0 274190 0 1176700 1217200 668 464 680 3118;3119;3120;3121 2153;2154 2153 2 AQHEDQVEQYK ADALQELRAQHEDQVE EDQVEQYKKELEKTYS R A Q Y K K 1 0 0 1 0 3 2 0 1 0 0 1 0 0 0 0 0 0 1 1 0 11 0 1373.6212 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCJ4;Q5TCI8;H0YAB0 P02545 250 260 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.0062398 68.515 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 5861900 490340 981930 1456800 0 528910 2403900 669 783 681 3122;3123;3124;3125;3126 2155;2156;2157;2158 2156 4 AQHEDQVEQYKK ADALQELRAQHEDQVE DQVEQYKKELEKTYSA R A Q K K E 1 0 0 1 0 3 2 0 1 0 0 2 0 0 0 0 0 0 1 1 0 12 1 1501.7161 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCJ4;Q5TCI8;H0YAB0 P02545 250 261 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.0041535 61.03 By matching By MS/MS By matching By matching By matching By matching 1 1 2000900 0 1114100 0 886850 0 0 670 783 682 3127;3128 2159 2159 1 AQIHDLVLVGGSTRIPK LRDAKLDKAQIHDLVL GGSTRIPKVQKLLQDF K A Q P K V 1 1 0 1 0 1 0 2 1 2 2 1 0 0 1 1 1 0 0 2 0 17 1 1803.0367 P08107;H0YG33;F8VZJ4;F5H1D3;F5GZ62;Q5SP16;E7EP94 P08107 329 345 HSPA1A Heat shock 70 kDa protein 1A/1B yes no 3;4 0.0022332 68.329 By matching By MS/MS By matching By matching By matching By matching 2 14475000 0 14475000 0 0 0 0 671 619 683 3129;3130 2160;2161 2160 2 AQKTPYIVLSGSGK ALLQEKQKAQKTPYIV IVLSGSGKSMNANTIT K A Q G K S 1 0 0 0 0 1 0 2 0 1 1 2 0 0 1 2 1 0 1 1 0 14 1 1447.8035 O43290;G3V1T2 O43290 778 791 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 2;3 0.0011288 72.523 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 2 1 22971000 4406800 5287000 666520 1367700 6935000 4307700 672 713 684 3131;3132;3133;3134;3135;3136;3137 2162;2163;2164 2164 3 AQLGGPEAAKSDETAAK IPVTFESRAQLGGPEA KSDETAAK________ R A Q A K - 5 0 0 1 0 1 2 2 0 0 1 2 0 0 1 1 1 0 0 0 0 17 1 1642.8162 B4DL87;P04792;C9J3N8 B4DL87 154 170 HSPB1 Heat shock protein beta-1 yes no 3 0.025468 38.808 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1317300 0 0 393060 259890 664320 0 673 96 685 3138;3139;3140 2165 2165 1 AQLMNCHVSAGTRHK GTNVYITRAQLMNCHV VSAGTRHKVLLRRLLA R A Q H K V 2 1 1 0 1 1 0 1 2 0 1 1 1 0 0 1 1 0 0 1 0 15 1 1708.825 Q96RE7 Q96RE7 382 396 NACC1 Nucleus accumbens-associated protein 1 yes yes 3 0.0085361 48.527 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1603900 0 320580 398950 0 0 884330 674 1417 686 3141;3142;3143 2166 2166 1 AQLSSSLQEGVMQK ECSVFLSKAQLSSSLQ LQEGVMQKFNGHDALP K A Q Q K F 1 0 0 0 0 3 1 1 0 0 2 1 1 0 0 3 0 0 0 1 0 14 0 1504.7555 O96028-5;O96028-3;O96028;O96028-6;D6R9V2;D6RIS1;O96028-7 O96028-5 51 64 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 2 0.0011147 82.925 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 17638000 2024300 3737500 2341800 716310 1111500 7706300 675 779 687 3144;3145;3146;3147;3148;3149 2167;2168;2169;2170;2171 2169 5 AQLYTTNTVKTDLPPPSSESEQIDLTEEQK KGKRNFFKAQLYTTNT IDLTEEQKDDSEWLSS K A Q Q K D 1 0 1 2 0 3 4 0 0 1 3 2 0 0 3 3 5 0 1 1 0 30 1 3361.6413 P54132;H0YNU5;H0YLV8 P54132 196 225 BLM Bloom syndrome protein yes no 3 0.030784 24.866 By matching By MS/MS By matching By matching By matching By matching 1 19284000 0 19284000 0 0 0 0 676 965 688 3150 2172 2172 1 AQMEFLFRK ________________ QMEFLFRKNTLTAAWK M A Q R K N 1 1 0 0 0 1 1 0 0 0 1 1 1 2 0 0 0 0 0 0 0 9 1 1168.6063 H3BRQ1 H3BRQ1 2 10 KIFC3 yes yes 2 0.033887 41.427 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 677 645 689 3151 2173 2173 66 1 AQNEATSTPHRIR KRDAKEAKAQNEATST TSTPHRIRRKSSVLTM K A Q I R R 2 2 1 0 0 1 1 0 1 1 0 0 0 0 1 1 2 0 0 0 0 13 1 1479.7542 Q13415 Q13415 368 380 ORC1 Origin recognition complex subunit 1 yes yes 3 0.0011699 77.062 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 9219000 0 1934000 5190700 658870 449630 985760 678 1080 690 3152;3153;3154;3155;3156 2174 2174 1 AQNTWGCGNSLR PPTDLVWKAQNTWGCG WGCGNSLRTALINSTG K A Q L R T 1 1 2 0 1 1 0 2 0 0 1 0 0 0 0 1 1 1 0 0 0 12 0 1362.6099 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q5TCI8 P02545 516 527 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.0017963 83.226 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 5747200 0 2640900 784730 718110 0 1603500 679 783 691 3157;3158;3159;3160 2175;2176 2176 2 AQPAQPADEPAEK LEERPQRKAQPAQPAD PADEPAEKADEPMEH_ K A Q E K A 4 0 0 1 0 2 2 0 0 0 0 1 0 0 3 0 0 0 0 0 0 13 0 1350.6416 P25786;P25786-2;F5GX11 P25786 244 256 PSMA1 Proteasome subunit alpha type-1 yes no 2 0.021532 47.621 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 3672300 0 0 1142300 333590 898970 1297400 680 876 692 3161;3162;3163;3164 2177;2178 2178 2 AQPAQPADEPAEKADEPMEH LEERPQRKAQPAQPAD KADEPMEH________ K A Q E H - 5 0 0 2 0 2 4 0 1 0 0 1 1 0 4 0 0 0 0 0 0 20 1 2159.943 P25786;P25786-2;F5GX11 P25786 244 263 PSMA1 Proteasome subunit alpha type-1 yes no 3 2.4521E-06 83.252 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 22939000 2134100 3453200 5484600 2788800 4128300 4949900 681 876 693 3165;3166;3167;3168;3169;3170 2179;2180;2181;2182;2183;2184;2185 2183 7 AQPLEDLAGFTELSETSGHTQESLTAGK RPRAPKEKAQPLEDLA QESLTAGKATKIPCES K A Q G K A 3 0 0 1 0 2 4 3 1 0 4 1 0 1 1 3 4 0 0 0 0 28 0 2916.3989 P46013;F5H4V4;P46013-2 P46013 2673 2700 MKI67 Antigen KI-67 no no 3 1.1348E-26 81.94 By matching By matching By MS/MS By matching By matching By matching 1 0 0 0 0 0 0 0 682 919;920 694 3171 2186 2186 1 AQPLEDLAGLK RHPKTKEKAQPLEDLA LEDLAGLKELFQTPVC K A Q L K E 2 0 0 1 0 1 1 1 0 0 3 1 0 0 1 0 0 0 0 0 0 11 0 1153.6343 P46013;F5H4V4;P46013-2 P46013 1461 1471 MKI67 Antigen KI-67 no no 2 0.010566 64.224 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 305560000 0 281890000 0 0 23665000 0 683 919;920 695 3172;3173 2187;2188 2188 2 AQPSGPSQPHVCGFCGK MAPRPRVRAQPSGPSQ HVCGFCGKEFPRSSDL R A Q G K E 1 0 0 0 2 2 0 3 1 0 0 1 0 1 3 2 0 0 0 1 0 17 0 1812.8036 Q96MX3 Q96MX3 534 550 ZNF48 Zinc finger protein 48 yes yes 3 0.0034172 48.899 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 17310000 3791100 1775800 1497400 2613100 3446700 4185800 684 1408 696 3174;3175;3176;3177;3178;3179 2189;2190;2191;2192 2190 4 AQPTPSSSATQSKPTPVKPNYALK KPETEAARAQPTPSSS VKPNYALKFTLAGHTK R A Q L K F 3 0 1 0 0 2 0 0 0 0 1 3 0 0 5 4 3 0 1 1 0 24 2 2497.3177 P61964 P61964 15 38 WDR5 WD repeat-containing protein 5 yes yes 4 0.00031666 54.008 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 35977000 4679400 5154800 6939400 2685300 8054000 8464400 685 983 697 3180;3181;3182;3183;3184;3185 2193;2194 2194 2 AQPVPHYGVPFKPQIPEAR EDEPVVIKAQPVPHYG KPQIPEARTVEICPFS K A Q A R T 2 1 0 0 0 2 1 1 1 1 0 1 0 1 5 0 0 0 1 2 0 19 1 2130.1374 Q9ULW0;Q96RR5 Q9ULW0 513 531 TPX2;HCA90 Targeting protein for Xklp2 yes no 3;4 1.3432E-81 127.32 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 1108100000 151130000 78199000 420790000 119120000 41465000 297350000 686 1611 698 3186;3187;3188;3189;3190;3191;3192;3193;3194;3195;3196;3197 2195;2196;2197;2198;2199;2200;2201;2202;2203;2204;2205 2199 11 AQQAPEGQPRLDQGSGASAEDAAVQEER DCFRLIEKAQQAPEGQ DAAVQEERDAGVLSRV K A Q E R D 6 2 0 2 0 5 4 3 0 0 1 0 0 0 2 2 0 0 0 1 0 28 1 2894.3391 Q96Q06-2;Q96Q06 Q96Q06-2 1290 1317 PLIN4 Perilipin-4 yes no 3 1.1251E-23 81.974 By matching By MS/MS By matching By matching By matching By matching 1 1022400 0 1022400 0 0 0 0 687 1413 699 3198 2206 2206 1 AQQLEEARLQEEEQK MAEVEAQKAQQLEEAR RLQEEEQKKEELARLR K A Q Q K K 2 1 0 0 0 4 5 0 0 0 2 1 0 0 0 0 0 0 0 0 0 15 1 1827.8963 Q9ULW0;Q96RR5 Q9ULW0 686 700 TPX2;HCA90 Targeting protein for Xklp2 yes no 2;3 0.0025646 62.035 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 2 2 120080000 10789000 27386000 0 11682000 17793000 52435000 688 1611 700 3199;3200;3201;3202;3203;3204;3205;3206 2207;2208;2209;2210;2211 2210 5 AQQQEEQGSVNDVKEEEK SSFGSEAKAQQQEEQG NDVKEEEKEEKEVLPD K A Q E K E 1 0 1 1 0 4 5 1 0 0 0 2 0 0 0 1 0 0 0 2 0 18 1 2073.9451 Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2 Q9Y4W2-3 493 510 LAS1L Ribosomal biogenesis protein LAS1L yes no 3 0.0016293 58.246 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 19299000 4493000 0 4095100 4766800 137530 5806200 689 1651 701 3207;3208;3209;3210;3211 2212;2213;2214 2213 3 AQRAFPNPYADYNK ________________ NPYADYNKSLAEGYFD M A Q N K S 3 1 2 1 0 1 0 0 0 0 0 1 0 1 2 0 0 0 2 0 0 14 1 1653.79 E9PHS0;O43813;F8WDS9 E9PHS0 2 15 LANCL1 LanC-like protein 1 yes no 2 5.6179E-235 168.67 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 14095000 0 0 0 3243900 0 10851000 690 441 702 3212;3213;3214 2215;2216;2217 2217 3 AQRELGELIPLRQK GLRAELLRAQRELGEL ELIPLRQKVAEQERTA R A Q Q K V 1 2 0 0 0 2 2 1 0 1 3 1 0 0 1 0 0 0 0 0 0 14 2 1649.9577 Q14980-2;Q14980;F5H2L0;H0YFY6;H0YH75 Q14980-2 1402 1415 NUMA1 Nuclear mitotic apparatus protein 1 yes no 4 0.022122 43.305 By matching By matching By matching By matching By matching By MS/MS 1 20902000 0 0 0 0 0 20902000 691 1121 703 3215 2218 2218 1 AQRIEYDCELVPR SDGKFIARAQRIEYDC YDCELVPRRVAIFIEK R A Q P R R 1 2 0 1 1 1 2 0 0 1 1 0 0 0 1 0 0 0 1 1 0 13 1 1647.8039 Q9P258 Q9P258 298 310 RCC2 Protein RCC2 yes yes 3 5.4751E-09 101.45 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 69622000 29289000 15435000 0 9574500 2663500 12660000 692 1575 704 3216;3217;3218;3219;3220 2219;2220;2221;2222;2223;2224;2225 2225 7 AQRIEYDCELVPRR SDGKFIARAQRIEYDC DCELVPRRVAIFIEKT R A Q R R V 1 3 0 1 1 1 2 0 0 1 1 0 0 0 1 0 0 0 1 1 0 14 2 1803.905 Q9P258 Q9P258 298 311 RCC2 Protein RCC2 yes yes 4 0.013144 47.429 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 8073300 0 3543100 0 565760 1458400 2506100 693 1575 705 3221;3222;3223;3224 2226;2227 2227 2 AQSAGTVRSAAPPQEK EESTEVLKAQSAGTVR SAAPPQEKKRKVEKDT K A Q E K K 4 1 0 0 0 2 1 1 0 0 0 1 0 0 2 2 1 0 0 1 0 16 1 1596.822 G5E9D3;P20810-5;E7ESM9;P20810-7;P20810-6;B7Z468;F8W7E0;H0Y7F0;P20810-3;E9PDE4;E7ES10;P20810-4;E9PCH5;G5E946;B7Z574;P20810-2;P20810;H0Y9H6;E7EVY3;H0YA91 G5E9D3 304 319 CAST Calpastatin yes no 3 0.0039447 52.372 By matching By matching By matching By matching By matching By MS/MS 1 1 2496300 1218600 0 0 0 0 1277700 694 375 706 3225;3226 2228 2228 1 AQSGSDSSPEPKAPAPR DKPRAAPRAQSGSDSS EPKAPAPRALPRRSRS R A Q P R A 3 1 0 1 0 1 1 1 0 0 0 1 0 0 4 4 0 0 0 0 0 17 1 1680.8067 Q9UQ35;F5GWZ7;Q9UQ35-2;I3L2L6 Q9UQ35 1614 1630 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.0021983 54.768 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1887300 654060 570300 0 0 662950 0 695 1623 707 3227;3228;3229 2229;2230 2230 2 AQSLTTCEVCGACFETRK KQELQDLKAQSLTTCE GACFETRKGLSSHARS K A Q R K G 2 1 0 0 3 1 2 1 0 0 1 1 0 1 0 1 3 0 0 1 0 18 1 2116.934 B7ZM82;B3KVH1;O95785 B7ZM82 47 64 WIZ Protein Wiz yes no 3 0.00091101 63.691 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 9326600 1441600 1734100 1111500 0 2216800 2822600 696 212 708 3230;3231;3232;3233;3234 2231;2232;2233;2234;2235 2233 5 AQSLVISPPAPSPR SEIHVEVKAQSLVISP SPPAPSPRKTPVASDQ K A Q P R K 2 1 0 0 0 1 0 0 0 1 1 0 0 0 4 3 0 0 0 1 0 14 0 1418.7882 P46013;F5H4V4;P46013-2;E7EN66 P46013 573 586 MKI67 Antigen KI-67 no no 2 4.8344E-86 139.64 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 1 153450000 38926000 11185000 23457000 3243800 10479000 66161000 697 919;920 709 3235;3236;3237;3238;3239;3240;3241;3242 2236;2237;2238;2239;2240;2241;2242 2237 7 AQSLVISPPAPSPRKTPVASDQR SEIHVEVKAQSLVISP TPVASDQRRRSCKTAP K A Q Q R R 3 2 0 1 0 2 0 0 0 1 1 1 0 0 5 4 1 0 0 2 0 23 2 2401.3078 P46013;F5H4V4;P46013-2;E7EN66 P46013 573 595 MKI67 Antigen KI-67 no no 4 0.026551 32.576 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4204700 1613200 533610 0 0 442280 1615600 698 919;920 710 3243;3244;3245;3246 2243 2243 1 AQSSGPEHPGPESSLPSGALSK ALPPPLHKAQSSGPEH LPSGALSKSAPGSFWH K A Q S K S 2 0 0 0 0 1 2 3 1 0 2 1 0 0 4 6 0 0 0 0 0 22 0 2119.0182 Q9H8N7 Q9H8N7 374 395 ZNF395 Zinc finger protein 395 yes yes 3 0.0054924 42.618 By matching By matching By matching By matching By matching By MS/MS 1 3612300 0 0 0 0 0 3612300 699 1502 711 3247 2244 2244 1 AQVFSCPACR DCLDRSFRAQVFSCPA VFSCPACRYDLGRSYA R A Q C R Y 2 1 0 0 2 1 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 10 0 1194.5274 B5ME40;F5GXG0;Q96T88;Q96PU4 B5ME40 368 377 UHRF1;UHRF2 E3 ubiquitin-protein ligase UHRF1;E3 ubiquitin-protein ligase UHRF2 no no 2 0.012906 57.347 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4525600 138390 0 892350 0 330090 3164800 700 175;1411 712 3248;3249;3250;3251 2245 2245 1 AQYEDIAQK DSIIAEVKAQYEDIAQ QYEDIAQKSKAEAESL K A Q Q K S 2 0 0 1 0 2 1 0 0 1 0 1 0 0 0 0 0 0 1 0 0 9 0 1064.5138 P04264 P04264 356 364 KRT1 Keratin, type II cytoskeletal 1 yes yes 2 0.0021058 106.6 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 37022000 0 6352000 18468000 3290700 2067100 6844700 + 701 789 713 3252;3253;3254;3255;3256 2246;2247;2248;2249 2247 4 AQYEDIAQKSK DSIIAEVKAQYEDIAQ EDIAQKSKAEAESLYQ K A Q S K A 2 0 0 1 0 2 1 0 0 1 0 2 0 0 0 1 0 0 1 0 0 11 1 1279.6408 P04264 P04264 356 366 KRT1 Keratin, type II cytoskeletal 1 yes yes 2;3 1.0233E-12 114.71 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 47598000 1932100 12198000 17725000 5063800 4050200 6628700 + 702 789 714 3257;3258;3259;3260;3261;3262;3263;3264;3265;3266;3267;3268 2250;2251;2252;2253;2254;2255;2256 2250 7 AQYEEIAQR DSIIAEVKAQYEEIAQ QYEEIAQRSKEEAEAL K A Q Q R S 2 1 0 0 0 2 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 9 0 1106.5356 P35908;CON__P35908;Q01546;P02538;CON__P02538;E7EUE8;P04259;CON__P04259;F5H6G5;F8VS64;P19013;CON__P19013;F5H8K9 P35908 354 362 KRT2;KRT76;KRT6A;KRT6B;KRT4 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 4 no no 2 0.021779 68.847 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 15099000 0 3531800 5494800 1846000 1244300 2981700 + 703 302;287;788;300 715 3269;3270;3271;3272;3273 2257;2258;2259 2258 3 AQYEEIAQRSK DSIIAEVKAQYEEIAQ EEIAQRSKEEAEALYH K A Q S K E 2 1 0 0 0 2 2 0 0 1 0 1 0 0 0 1 0 0 1 0 0 11 1 1321.6626 P35908;CON__P35908;Q01546;F8VS64;P19013;CON__P19013;F5H8K9 P35908 354 364 KRT2;KRT76;KRT4 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 4 no no 3 0.0052125 73.666 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 3235300 0 2072000 1163300 0 0 0 + 704 302;300 716 3274;3275 2260;2261 2261 2 ARAETEELIRER AAVGQLGRARAETEEL TEELIRERVRQVVAHV R A R E R V 2 3 0 0 0 0 4 0 0 1 1 0 0 0 0 0 1 0 0 0 0 12 2 1471.7743 H3BT29;H3BUJ5;P29590-14;P29590-10;E9PBR7;P29590-4;H3BT57;P29590-12;P29590-2;P29590-5;P29590-9;P29590-13;P29590-3;P29590-8;P29590-11;H2N333;P29590 H3BT29 43 54 PML Protein PML yes no 3 0.038952 56.936 By matching By matching By matching By matching By matching By MS/MS 1 1230000 0 0 0 0 0 1230000 705 408 717 3276 2262 2262 1 ARALEDLVDFK QLRTRKEKARALEDLV LEDLVDFKELFSAPGH K A R F K E 2 1 0 2 0 0 1 0 0 0 2 1 0 1 0 0 0 0 0 1 0 11 1 1275.6823 P46013;F5H4V4;P46013-2 P46013 2553 2563 MKI67 Antigen KI-67 no no 2 7.9937E-05 102.97 By matching By MS/MS By matching By matching By matching By matching 1 24264000 0 24264000 0 0 0 0 706 919;920 718 3277 2263 2263 1 ARDDGQADSEVLGECAR GPGWARRRARDDGQAD EVLGECARRSQPERCR R A R A R R 3 2 0 3 1 1 2 2 0 0 1 0 0 0 0 1 0 0 0 1 0 17 1 1847.8068 Q8NCN4 Q8NCN4 118 134 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 3 0.0088044 44.391 By matching By matching By MS/MS By matching By matching By matching 1 1 1071900 277130 0 794780 0 0 0 707 1318 719 3278;3279 2264 2264 1 ARDDGQADSEVLGECARR GPGWARRRARDDGQAD VLGECARRSQPERCRP R A R R R S 3 3 0 3 1 1 2 2 0 0 1 0 0 0 0 1 0 0 0 1 0 18 2 2003.9079 Q8NCN4 Q8NCN4 118 135 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 4 0.00049306 81.346 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 8914400 763980 1231000 1710800 1129500 1727300 2351900 708 1318 720 3280;3281;3282;3283;3284;3285 2265;2266;2267;2268;2269 2266 5 ARDINAVLIDMER AKNIGLTKARDINAVL AVLIDMERQGDVYRQG K A R E R Q 2 2 1 2 0 0 1 0 0 2 1 0 1 0 0 0 0 0 0 1 0 13 1 1514.7875 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 327 339 ADAR Double-stranded RNA-specific adenosine deaminase no no 2 0.0086424 71.529 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 105870000 0 18751000 0 0 0 87122000 709 352;968 721 3286;3287 2270;2271 2270 1 ARDYDAMGSQTKFVQCPDGELQK KLGRSFTRARDYDAMG CPDGELQKRKEVVHTV R A R Q K R 2 1 0 3 1 3 1 2 0 0 1 2 1 1 1 1 1 0 1 1 0 23 2 2643.2057 Q9Y230;B3KQ59 Q9Y230 212 234 RUVBL2 RuvB-like 2 yes no 4 1.649E-08 68.291 By MS/MS By matching By matching By matching By matching By matching 1 1 4004900 3170800 0 0 0 0 834040 710 1627 722 3288;3289 2272 2272 1 ARHVFLTGPPGVGK ________________ TGPPGVGKTTLIHKAS M A R G K T 1 1 0 0 0 0 0 3 1 0 1 1 0 1 2 0 1 0 0 2 0 14 1 1434.8096 Q9BSD7;Q5TDF0 Q9BSD7 2 15 NTPCR Cancer-related nucleoside-triphosphatase yes no 3 3.2762E-28 113.43 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2 36901000 0 2997400 21233000 3845500 4552200 4272200 711 1444 723 3290;3291;3292;3293;3294;3295 2273;2274 2273 2 ARKAMEVEIEDLHLQIDDIAK FTCAAAVKARKAMEVE LQIDDIAKAKTALEEQ K A R A K A 3 1 0 3 0 1 3 0 1 3 2 2 1 0 0 0 0 0 0 1 0 21 2 2436.2683 E9PQN8;Q92614-5;F8W6Y3;Q92614-2;Q92614-3;F8W6U1;Q92614-4;Q92614 E9PQN8 601 621 MYO18A Unconventional myosin-XVIIIa yes no 3 0.0063837 50.117 By matching By matching By matching By matching By matching By MS/MS 1 18858000 0 0 0 0 0 18858000 712 465 724 3296 2275 2275 1 ARMGMRMK LSPAARTRARMGMRMK ARMGMRMKRMTRTKTT R A R M K R 1 2 0 0 0 0 0 1 0 0 0 1 3 0 0 0 0 0 0 0 0 8 2 979.48778 E9PKP7 E9PKP7 680 687 UBTF yes yes 2 0.032355 42.396 By matching By matching By MS/MS By matching By matching By matching 1 0 0 0 0 0 0 0 713 455 725 3297 2276 2276 51;52;53 1 ARPAADPTGAPAAEAAQPQAQVAAHPEQTAPWTEK ANAHSSARARPAADPT QTAPWTEKELQPSEKQ R A R E K E 12 1 0 1 0 4 3 1 1 0 0 1 0 0 6 0 3 1 0 1 0 35 1 3533.7288 Q96Q06-2;Q96Q06 Q96Q06-2 30 64 PLIN4 Perilipin-4 yes no 4 2.4084E-12 48.405 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 12993000 4962000 2099200 0 0 0 5931600 714 1413 726 3298;3299;3300 2277;2278;2279;2280;2281;2282 2278 6 ARPAADPTGAPAAEAAQPQAQVAAHPEQTAPWTEKELQPSEK ANAHSSARARPAADPT KELQPSEKQMVSGAKD R A R E K Q 12 1 0 1 0 5 5 1 1 0 1 2 0 0 7 1 3 1 0 1 0 42 2 4345.1363 Q96Q06-2;Q96Q06 Q96Q06-2 30 71 PLIN4 Perilipin-4 yes no 4;5 1.1117E-42 60.649 By matching By matching By matching By MS/MS By matching By MS/MS 1 2 25701000 0 0 0 8330700 0 17370000 715 1413 727 3301;3302;3303 2283;2284;2285 2285 3 ARPNTVISQEPFVPK QKEAACFKARPNTVIS SQEPFVPKKEKKSVAE K A R P K K 1 1 1 0 0 1 1 0 0 1 0 1 0 1 3 1 1 0 0 2 0 15 1 1681.9152 Q9ULW0;Q96RR5 Q9ULW0 627 641 TPX2;HCA90 Targeting protein for Xklp2 yes no 2;3 1.2944E-42 122.12 By MS/MS By matching By matching By matching By MS/MS By matching 1 2 2 68090000 2175200 0 19457000 0 46458000 0 716 1611 728 3304;3305;3306;3307;3308 2286;2287;2288 2286 3 ARPSQFPEQSSSAQQNAR NRVVGSARARPSQFPE SSAQQNARRKSNCVKE R A R A R R 3 2 1 0 0 4 1 0 0 0 0 0 0 1 2 4 0 0 0 0 0 18 1 1987.946 O00139-2;D6R9M0 O00139-2 91 108 KIF2A Kinesin-like protein KIF2A yes no 3 1.87E-58 120.99 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 1 1 20063000 2617800 5100600 1935600 1352700 1990500 7065900 717 686 729 3309;3310;3311;3312;3313;3314;3315;3316 2289;2290;2291;2292;2293;2294;2295;2296;2297;2298 2293 10 ARPSQFPEQSSSAQQNGSVSDISPVQAAK NRVVGSARARPSQFPE ISPVQAAKKEFGPPSR R A R A K K 4 1 1 1 0 5 1 1 0 1 0 1 0 1 3 7 0 0 0 2 0 29 1 3000.4537 O00139-1;E9PB70;O00139;O00139-4 O00139-1 91 119 KIF2A Kinesin-like protein KIF2A yes no 3 2.0113E-92 113.15 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 22151000 5900400 2531700 9941100 0 0 3777700 718 403 730 3317;3318;3319;3320 2299;2300;2301;2302;2303;2304 2300 6 ARQAVGGAGPPNPAINGSAPR VNVQNLDKARQAVGGA AINGSAPRDLFDMKPF K A R P R D 5 2 2 0 0 1 0 4 0 1 0 0 0 0 4 1 0 0 0 1 0 21 1 1957.0242 H0Y539;E9PFM5;P29353-5;P29353-3;P29353-2;P29353-7;B4DL02;P29353;P29353-6 H0Y539 100 120 SHC1 SHC-transforming protein 1 yes no 3 0.031283 33.79 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3348700 0 1074900 588860 0 617600 1067400 719 94 731 3321;3322;3323;3324 2305 2305 1 ARQCEKENLGWQK NDYDQLQKARQCEKEN KENLGWQKLESEKAIK K A R Q K L 1 1 1 0 1 2 2 1 0 0 1 2 0 0 0 0 0 1 0 0 0 13 2 1645.7995 P15924;P15924-2 P15924 1145 1157 DSP Desmoplakin yes no 4 0.0022549 64.945 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 4030800 0 667320 1598400 639690 0 1125400 720 840 732 3325;3326;3327;3328 2306;2307;2308;2309 2308 4 ARRILELSGSSSEDSEK LAEIEEDKARRILELS SSSEDSEKVIAGLYQR K A R E K V 1 2 0 1 0 0 3 1 0 1 2 1 0 0 0 5 0 0 0 0 0 17 2 1862.9334 P78527;E7EUY0;P78527-2 P78527 3356 3372 PRKDC DNA-dependent protein kinase catalytic subunit yes no 4 0.022367 38.808 By matching By matching By matching By matching By matching By MS/MS 1 986230 0 0 0 0 0 986230 721 1012 733 3329 2310 2310 1 ARSILLATDVASR SLNKFKAKARSILLAT LATDVASRGLDIPHVD K A R S R G 3 2 0 1 0 0 0 0 0 1 2 0 0 0 0 2 1 0 0 1 0 13 1 1371.7834 Q9H0S4;G5E955 Q9H0S4 313 325 DDX47 Probable ATP-dependent RNA helicase DDX47 yes no 3 0.025906 77.42 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 722 1481 734 3330 2311 2311 1 ARVAEPGAEATSSTGEESGSEHPPAVPMHNK ASGLKALKARVAEPGA PAVPMHNKRKRPRKKS K A R N K R 5 1 1 0 0 0 5 3 2 0 0 1 1 0 4 4 2 0 0 2 0 31 1 3129.4422 Q14684-2;Q14684 Q14684-2 423 453 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 4;5 5.6251E-07 46.781 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 3 3 2 40277000 5805500 0 3100300 6716400 13428000 11227000 723 1111 735 3331;3332;3333;3334;3335;3336;3337;3338;3339;3340;3341 2312;2313;2314;2315;2316;2317;2318 2317 3 ASAELQTLLMNQLTVK MHLLLWGKASAELQTL LMNQLTVKGLKKLGQS K A S V K G 2 0 1 0 0 2 1 0 0 0 4 1 1 0 0 1 2 0 0 1 0 16 0 1758.955 Q9UJX5-2;Q9UJX5;E9PCR4 Q9UJX5-2 313 328 ANAPC4 Anaphase-promoting complex subunit 4 yes no 3 0.0098983 44.312 By matching By matching By matching By MS/MS By matching By matching 1 2817500 0 0 0 2817500 0 0 724 416 736 3342 2319 2319 1 ASAGHVAVSSPTPETGPLQR VSQPCTPRASAGHVAV PETGPLQRLLPKARPM R A S Q R L 3 1 0 0 0 1 1 2 1 0 1 0 0 0 3 3 2 0 0 2 0 20 0 1960.9967 P42695 P42695 1320 1339 NCAPD3 Condensin-2 complex subunit D3 yes yes 3 0.00032388 59.585 By matching By MS/MS By matching By matching By matching By matching 1 1 2405200 0 1445300 0 0 959920 0 725 917 737 3343;3344 2320 2320 1 ASAILRSQKPVMVK LRMAAIRRASAILRSQ SQKPVMVKRKRTRPTK R A S V K R 2 1 0 0 0 1 0 0 0 1 1 2 1 0 1 2 0 0 0 2 0 14 2 1526.8967 P46779 P46779 114 127 RPL28 60S ribosomal protein L28 yes yes 3 0.0042115 69.864 By matching By matching By matching By matching By MS/MS By MS/MS 2 1 4025900 0 0 0 0 2345100 1680800 726 926 738 3345;3346;3347 2321;2322 2322 2 ASAPERTPSPAPK PSSASQAKASAPERTP RTPSPAPKRKKRQQRA K A S P K R 3 1 0 0 0 0 1 0 0 0 0 1 0 0 4 2 1 0 0 0 0 13 1 1307.6834 C9JJU9;Q96P11-2;Q63ZY6;Q63ZY6-6;Q3KNT7-3 C9JJU9 398 410 NSUN5;NSUN5P2;NSUN5P1 Putative methyltransferase NSUN5;Putative methyltransferase NSUN5C;Putative NOL1/NOP2/Sun domain family member 5B yes no 2;3 0.0022763 66.326 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 2 2 2 2 2 35756000 2891400 5172700 8203000 3112700 5960800 10415000 727 255 739 3348;3349;3350;3351;3352;3353;3354;3355;3356;3357;3358 2323;2324;2325;2326;2327 2326 5 ASAPLSQSGLATANGKPEPTSIS QGSRNSEKASAPLSQS KPEPTSIS________ K A S I S - 4 0 1 0 0 1 1 2 0 1 2 1 0 0 3 5 2 0 0 0 0 23 1 2183.107 F8VXI8;Q9H9L4;F8VX10;H0YHR2 F8VXI8 432 454 KANSL2 KAT8 regulatory NSL complex subunit 2 yes no 2 6.8484E-08 72.316 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 11298000 0 770350 7064800 0 0 3463200 728 546 740 3359;3360;3361 2328;2329 2329 2 ASAPSPNAQVACDHCLK DVWTPPARASAPSPNA VACDHCLKEAAVKTCL R A S L K E 4 0 1 1 2 1 0 0 1 0 1 1 0 0 2 2 0 0 0 1 0 17 0 1824.8247 Q14258 Q14258 96 112 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 3 0.00088672 71.316 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 10994000 1091900 0 1984900 593740 3539900 3783800 729 1105 741 3362;3363;3364;3365;3366 2330 2330 0 ASAQQENSSTCIGSAIK KTSAKTERASAQQENS TCIGSAIKSESGNSAR R A S I K S 3 0 1 0 1 2 1 1 0 2 0 1 0 0 0 4 1 0 0 0 0 17 0 1750.8156 Q9NXV6 Q9NXV6 168 184 CDKN2AIP CDKN2A-interacting protein yes yes 2 0.0030837 66.977 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 8743100 922330 0 1221100 939400 2204100 3456200 730 1560 742 3367;3368;3369;3370;3371 2331;2332;2333;2334;2335 2333 5 ASASGSGAQVGGPISSGSSASSVTVTR TCGQPADKASASGSGA ASSVTVTRSYRSVGGS K A S T R S 4 1 0 0 0 1 0 5 0 1 0 0 0 0 1 9 2 0 0 3 0 27 0 2364.1517 P02545;P02545-3;D6RAQ3;E7EUI9 P02545 598 624 LMNA Prelamin-A/C;Lamin-A/C yes no 2;3 1.4431E-17 82.942 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 2 2 173070000 18276000 39774000 32861000 7113200 6298200 68749000 731 783 743 3372;3373;3374;3375;3376;3377;3378;3379;3380;3381;3382 2336;2337;2338;2339;2340;2341;2342;2343;2344;2345 2345 10 ASASGSGAQVGGPISSGSSASSVTVTRSYR TCGQPADKASASGSGA VTVTRSYRSVGGSGGG K A S Y R S 4 2 0 0 0 1 0 5 0 1 0 0 0 0 1 10 2 0 1 3 0 30 1 2770.3482 P02545;P02545-3;D6RAQ3;E7EUI9 P02545 598 627 LMNA Prelamin-A/C;Lamin-A/C yes no 3 9.4451E-05 40.625 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 33722000 5175100 7802800 8315800 4089400 3671300 4667400 732 783 744 3383;3384;3385;3386;3387;3388 2346;2347;2348 2347 3 ASASPGENDSGTGGEEPQRDK LKRKLEEKASASPGEN GEEPQRDKRLRTTITP K A S D K R 2 1 1 2 0 1 3 4 0 0 0 1 0 0 2 3 1 0 0 0 0 21 1 2087.8992 Q15911-2;Q15911 Q15911-2 1708 1728 ZFHX3 Zinc finger homeobox protein 3 yes no 3 1.5826E-05 62.916 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 3253900 0 470230 880870 387310 389330 1126200 733 1150 745 3389;3390;3391;3392;3393 2349;2350;2351 2350 3 ASASYHISNLLEK ________________ HISNLLEKMTSSDKDF M A S E K M 2 0 1 0 0 0 1 0 1 1 2 1 0 0 0 3 0 0 1 0 0 13 0 1431.7358 Q86VP6-2;Q86VP6 Q86VP6-2 2 14 CAND1 Cullin-associated NEDD8-dissociated protein 1 yes no 2 6.4455E-35 122.1 By matching By matching By MS/MS By matching By matching By matching 1 18123000 0 0 18123000 0 0 0 734 1266 746 3394 2352 2352 1 ASAVSELSPR YGTGSASRASAVSELS AVSELSPRERSPALKS R A S P R E 2 1 0 0 0 0 1 0 0 0 1 0 0 0 1 3 0 0 0 1 0 10 0 1015.5298 Q9Y2W1 Q9Y2W1 236 245 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 2.9755E-05 110.39 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 28501000 4276600 2660400 0 3999000 5264400 12301000 735 1639 747 3395;3396;3397;3398;3399 2353;2354;2355;2356 2354 4 ASDGISKGDTHEASACLGFQEEDPPGEK KGLEQGGKASDGISKG EEDPPGEKVASLPGDF K A S E K V 3 0 0 3 1 1 4 4 1 1 1 2 0 1 2 3 1 0 0 0 0 28 1 2931.2829 Q7Z5J4-3;E7EVZ3;Q7Z5J4;A8MTC3;Q7Z5J4-2;C9JWB0;A8MXE8;Q7Z5J4-4;E7ETW1 Q7Z5J4-3 775 802 RAI1 Retinoic acid-induced protein 1 yes no 4 0.028338 28.011 By matching By matching By matching By matching By MS/MS By matching 1 1 2373700 0 0 0 0 1125200 1248600 736 39 748 3400;3401 2357 2357 1 ASDGSFSLPLKPVISQPIHDSKSPGASNLK LRFSAFLRASDGSFSL SPGASNLKISRMDKTA R A S L K I 2 0 1 2 0 1 0 2 1 2 3 3 0 1 4 7 0 0 0 1 0 30 2 3076.6193 Q00653-3;Q00653-4;Q00653 Q00653-3 200 229 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes no 4 0.034813 23.467 By matching By matching By matching By matching By MS/MS By matching 1 2926200 0 0 0 0 2926200 0 737 1021 749 3402 2358 2358 1 ASDTSSETVFGK DPLGRADKASDTSSET SSETVFGKRGHVLGNG K A S G K R 1 0 0 1 0 0 1 1 0 0 0 1 0 1 0 3 2 0 0 1 0 12 0 1227.5619 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 530 541 LUZP1 Leucine zipper protein 1 yes no 2 0.0075788 61.532 By matching By matching By MS/MS By matching By matching By MS/MS 1 2 2 1 4776300 0 731770 1165300 0 1094500 1784700 738 1265 750 3403;3404;3405;3406;3407;3408 2359;2360 2359 2 ASEAEAPDKHGSASFVSLLK VTTAGSGKASEAEAPD ASFVSLLKSSVNSHMT K A S L K S 4 0 0 1 0 0 2 1 1 0 2 2 0 1 1 4 0 0 0 1 0 20 1 2043.0273 Q9NXV6 Q9NXV6 230 249 CDKN2AIP CDKN2A-interacting protein yes yes 4 0.011589 40.645 By matching By matching By matching By MS/MS By matching By matching 1 2265900 0 0 0 2265900 0 0 739 1560 751 3409 2361 2361 1 ASEAQPPVARTQPSSGVDSAVGTLPATSPQSTSVQAK ALKVLAQKASEAQPPV QSTSVQAKGTNKLRKP K A S A K G 6 1 0 1 0 4 1 2 0 0 1 1 0 0 5 7 4 0 0 4 0 37 1 3606.8125 Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 1084 1120 TCOF1 Treacle protein yes no 3 3.332E-24 54.036 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 21966000 13629000 2231500 0 6105400 0 0 740 1082 752 3410;3411;3412 2362;2363 2363 2 ASEDIAK ________________ MASEDIAKLAETLAKT M A S A K L 2 0 0 1 0 0 1 0 0 1 0 1 0 0 0 1 0 0 0 0 0 7 0 732.36538 P46060;B0QYT6;B0QYT5;B0QYT4 P46060 2 8 RANGAP1 Ran GTPase-activating protein 1 yes no 1 0.024106 50.632 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1218600 0 409670 808890 0 0 0 741 921 753 3413;3414 2364;2365 2365 2 ASEETLLGISK LINEQSPRASEETLLG ETLLGISKKAKQMKIN R A S S K K 1 0 0 0 0 0 2 1 0 1 2 1 0 0 0 2 1 0 0 0 0 11 0 1146.6132 A8MVI8;Q6NW34-2;Q6NW34;E9PFF8 A8MVI8 132 142 C3orf17 Uncharacterized protein C3orf17 yes no 2 5.3143E-13 116.74 By matching By matching By matching By matching By matching By MS/MS 1 1 2704600 0 366830 0 0 0 2337800 742 49 754 3415;3416 2366 2366 1 ASEGPAFFPGR DKGGYVIKASEGPAFF GPAFFPGRCAEIFARG K A S G R C 2 1 0 0 0 0 1 2 0 0 0 0 0 2 2 1 0 0 0 0 0 11 0 1134.5458 Q9NSD9;F5H6Y1 Q9NSD9 537 547 FARSB Phenylalanine--tRNA ligase beta subunit yes no 2 0.0066788 69.721 By matching By MS/MS By matching By matching By matching By matching 1 1574100 0 1574100 0 0 0 0 743 1543 755 3417 2367 2367 1 ASESSKPWPDATYGTGSASR GGTSQDTKASESSKPW YGTGSASRASAVSELS K A S S R A 3 1 0 1 0 0 1 2 0 0 0 1 0 0 2 5 2 1 1 0 0 20 1 2053.9341 Q9Y2W1 Q9Y2W1 216 235 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 1.0268E-100 133.35 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 124820000 40440000 12751000 16251000 12077000 16220000 27079000 744 1639 756 3418;3419;3420;3421;3422;3423 2368;2369;2370;2371;2372;2373;2374;2375 2371 8 ASESSKPWPDATYGTGSASRASAVSELSPR GGTSQDTKASESSKPW AVSELSPRERSPALKS K A S P R E 5 2 0 1 0 0 2 2 0 0 1 1 0 0 3 8 2 1 1 1 0 30 2 3051.4534 Q9Y2W1 Q9Y2W1 216 245 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 4 4.1197E-132 127.41 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 63336000 25311000 0 0 34502000 3522900 0 745 1639 757 3424;3425;3426 2376;2377;2378 2378 3 ASEVEEILDGNDEK ATSVTLLKASEVEEIL ILDGNDEKYKAVSIST K A S E K Y 1 0 1 2 0 0 4 1 0 1 1 1 0 0 0 1 0 0 0 1 0 14 0 1546.6999 Q12824-2;Q12824;G5E975;C9JTA6;B5MCL5 Q12824-2 84 97 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes no 2 0.028272 41.838 By matching By matching By matching By matching By MS/MS By matching 1 1865200 0 0 0 0 1865200 0 746 592 758 3427 2379 2379 1 ASFASASAEVGK RKKKCPKKASFASASA SASAEVGKKGKKKCQK K A S G K K 4 0 0 0 0 0 1 1 0 0 0 1 0 1 0 3 0 0 0 1 0 12 0 1123.551 E9PPY3;O43159 E9PPY3 79 90 RRP8 Ribosomal RNA-processing protein 8 yes no 2 8.04E-13 112.5 By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 1 1 1 26908000 3743400 4807100 5886200 2364500 0 10107000 747 462 759 3428;3429;3430;3431;3432;3433 2380;2381;2382 2380 3 ASGAGGVGGGGGGKIR ________________ GGGGGKIRTRRCHQGP M A S I R T 2 1 0 0 0 0 0 9 0 1 0 1 0 0 0 1 0 0 0 1 0 16 1 1256.6585 P49790;F6QR24;Q4LE47 P49790 2 17 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 2 3.6486E-140 152 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 32014000 2701300 2348200 4381300 7267900 7088400 8227200 748 531 760 3434;3435;3436;3437;3438;3439;3440 2383;2384;2385;2386;2387 2387 5 ASGLAAGKGVIVAK DFPALVVKASGLAAGK GKGVIVAKSKEEACKA K A S A K S 4 0 0 0 0 0 0 3 0 1 1 2 0 0 0 1 0 0 0 2 0 14 1 1240.7503 C9JBJ1;C9JTV6;F8WD69;P22102-2;P22102;H7C366 C9JBJ1 149 162 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 2;3 0.0031465 70.68 By matching By MS/MS By matching By matching By MS/MS By MS/MS 2 2 2 1 2 2 15402000 1405900 2390200 1812600 702060 2472700 6618100 749 239 761 3441;3442;3443;3444;3445;3446;3447;3448;3449;3450;3451 2388;2389;2390;2391 2388 4 ASGNYATVISHNPETK GDRGKLARASGNYATV ISHNPETKKTRVKLPS R A S T K K 2 0 2 0 0 0 1 1 1 1 0 1 0 0 1 2 2 0 1 1 0 16 0 1687.8166 E9PKZ0;P62917;G3V1A1;E9PIZ3 E9PKZ0 129 144 RPL8 60S ribosomal protein L8 yes no 2;3 1.244E-26 107.5 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 42831000 6381700 5472600 3864700 4885300 11814000 10412000 750 456 762 3452;3453;3454;3455;3456;3457;3458;3459;3460;3461;3462;3463 2392;2393;2394;2395;2396;2397;2398;2399;2400;2401;2402;2403 2403 12 ASGPPVSELITK SAGAAKRKASGPPVSE PVSELITKAVAASKER K A S T K A 1 0 0 0 0 0 1 1 0 1 1 1 0 0 2 2 1 0 0 1 0 12 0 1197.6605 P16403;P10412;P16402 P10412 35 46 HIST1H1C;HIST1H1E;HIST1H1D Histone H1.2;Histone H1.4;Histone H1.3 no no 2 3.7356E-166 171.62 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 2 1 360120000 211680000 11292000 40839000 7446200 62823000 26042000 751 818;843 763 3464;3465;3466;3467;3468;3469;3470;3471;3472 2404;2405;2406;2407;2408;2409;2410;2411 2411 7 ASGVAVSDGVIK ________________ AVSDGVIKVFNDMKVR M A S I K V 2 0 0 1 0 0 0 2 0 1 0 1 0 0 0 2 0 0 0 3 0 12 0 1101.603 E9PP50;P23528;E9PK25;E9PS23 E9PP50 2 13 CFL1 Cofilin-1 yes no 1;2 1.1868E-65 142.76 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 2 278080000 3203500 32088000 94997000 11963000 13957000 121870000 752 461 764 3473;3474;3475;3476;3477;3478;3479;3480 2412;2413;2414;2415;2416;2417 2416 5 ASGVQVADEVCR ________________ QVADEVCRIFYDMKVR M A S C R I 2 1 0 1 1 1 1 1 0 0 0 0 0 0 0 1 0 0 0 3 0 12 0 1289.6034 P60981;F6RFD5 P60981 2 13 DSTN Destrin yes no 2 0.011799 60.345 By matching By matching By MS/MS By matching By matching By matching 1 1795000 0 0 1795000 0 0 0 753 980 765 3481 2418 2418 0 ASHNNTQIQVVSASNEPLAFASCGTEGFRNAK EIPIAHIKASHNNTQI TEGFRNAKKGTGIAAQ K A S A K K 5 1 4 0 1 2 2 2 1 1 1 1 0 2 1 4 2 0 0 2 0 32 1 3404.6168 P82912-2;P82912 P82912-2 89 120 MRPS11 28S ribosomal protein S11, mitochondrial yes no 4 3.6521E-20 72.11 By matching By MS/MS By matching By matching By matching By matching 1 1 39923000 0 23487000 0 16436000 0 0 754 1015 766 3482;3483 2419 2419 0 ASKENDWYLAYK YKNRAGNKASKENDWY NDWYLAYKASPGNLSQ K A S Y K A 2 0 1 1 0 0 1 0 0 0 1 2 0 0 0 1 0 1 2 0 0 12 1 1486.7092 B4E2Z2;P43246;E9PHA6;E7EU21;E7EQQ1;C9J809 B4E2Z2 45 56 MSH2 DNA mismatch repair protein Msh2 yes no 2;3 0.0025013 74.537 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 2 6660100 0 2407900 0 421440 0 3830800 755 162 767 3484;3485;3486;3487;3488 2420;2421;2422 2422 3 ASLCCPFCR CFQSTVEKASLCCPFC SLCCPFCRRRVSSWTR K A S C R R 1 1 0 0 3 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 9 0 1169.478 Q8IYW5;F8WD60 Q8IYW5 47 55 RNF168 E3 ubiquitin-protein ligase RNF168 yes no 2 0.025927 66.568 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 7797200 638920 1075300 1428000 0 0 4655000 756 1292 768 3489;3490;3491;3492 2423;2424 2423 2 ASLCISTK KLTGTANKASLCISTK ASLCISTKKEVEKMNK K A S T K K 1 0 0 0 1 0 0 0 0 1 1 1 0 0 0 2 1 0 0 0 0 8 0 878.45315 P09874 P09874 426 433 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.02381 76.679 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 22014000 5343500 8149700 0 3032200 0 5488600 757 815 769 3493;3494;3495;3496 2425;2426;2427 2426 3 ASLDSVFSDKLHSK NMICAVSKASLDSVFS FSDKLHSKYELQQIKH K A S S K Y 1 0 0 2 0 0 0 0 1 0 2 2 0 1 0 4 0 0 0 1 0 14 1 1532.7835 Q6PCB5-2;Q6PCB5 Q6PCB5-2 463 476 RSBN1L Round spermatid basic protein 1-like protein yes no 3 3.246E-14 100.73 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 13701000 0 1022200 7083700 0 0 5595600 758 1228 770 3497;3498;3499;3500 2428;2429;2430;2431;2432;2433 2433 6 ASLGLADHRELGK QAYTSVSKASLGLADH ADHRELGKMMNTIIFH K A S G K M 2 1 0 1 0 0 1 2 1 0 3 1 0 0 0 1 0 0 0 0 0 13 1 1365.7365 Q9Y2A7;Q9Y2A7-2 Q9Y2A7 502 514 NCKAP1 Nck-associated protein 1 yes no 3 0.0031428 64.121 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 7453600 530070 707690 1296700 838940 1574300 2506000 759 1630 771 3501;3502;3503;3504;3505;3506 2434;2435;2436 2436 3 ASLGSLEGEAEAEASSPKGK KGDLKSSKASLGSLEG EASSPKGKFSLFKSKK K A S G K F 4 0 0 0 0 0 4 3 0 0 2 2 0 0 1 4 0 0 0 0 0 20 1 1916.9327 Q09666 Q09666 5748 5767 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 3 0.019692 37.334 By matching By MS/MS By matching By matching By matching By matching 1 1661300 0 1661300 0 0 0 0 760 1054 772 3507 2437 2437 1 ASLNGADIYSGCCTLK VQSAQRAKASLNGADI YSGCCTLKIEYAKPTR K A S L K I 2 0 1 1 2 0 0 2 0 1 2 1 0 0 0 2 1 0 1 0 0 16 0 1728.7811 P14866;A6NIT8;B4DPK8;B4DVF8 P14866 249 264 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 2 0 185.86 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 238700000 82230000 18695000 61577000 276830 9966000 65952000 761 838 773 3508;3509;3510;3511;3512;3513 2438;2439;2440;2441 2441 4 ASLSAPGSEYGSPSVISVSK LMGKFVLKASLSAPGS PSVISVSKGSPDGSHP K A S S K G 2 0 0 0 0 0 1 2 0 1 1 1 0 0 2 7 0 0 1 2 0 20 0 1921.9633 O43474-4;O43474-1;O43474 O43474-4 183 202 KLF4 Krueppel-like factor 4 yes no 2 2.0146E-18 100.41 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 173170000 59065000 0 24586000 43877000 45642000 0 762 717 774 3514;3515;3516;3517;3518 2442;2443;2444;2445;2446;2447 2447 6 ASLSLIEK HENESVYKASLSLIEK ASLSLIEKYFSVEEEE K A S E K Y 1 0 0 0 0 0 1 0 0 1 2 1 0 0 0 2 0 0 0 0 0 8 0 859.50148 P52292 P52292 487 494 KPNA2 Importin subunit alpha-1 yes yes 2 0.037841 68.846 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2787000 0 1155500 482170 0 0 1149300 763 957 775 3519;3520;3521 2448 2448 1 ASLSRPLNYEPHKGK KKPVFDLKASLSRPLN NYEPHKGKLKPWGQSK K A S G K L 1 1 1 0 0 0 1 1 1 0 2 2 0 0 2 2 0 0 1 0 0 15 2 1695.9057 Q9BXS6-2;Q9BXS6-3;Q9BXS6;Q9BXS6-5;Q9BXS6-4 Q9BXS6-2 361 375 NUSAP1 Nucleolar and spindle-associated protein 1 no no 3 0.0075765 59.75 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4470900 0 788790 967170 0 860150 1854800 764 1463;1464 776 3522;3523;3524;3525 2449 2449 1 ASMAGASSSKESSRISDGK AHPRIAPKASMAGASS SSRISDGKKQEGPATQ K A S G K K 3 1 0 1 0 0 1 2 0 1 0 2 1 0 0 7 0 0 0 0 0 19 2 1854.8742 Q13428-7;E7ETY2;Q13428-6;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 1035 1053 TCOF1 Treacle protein no no 3 0.0095847 49.537 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 5302000 1314100 0 1038900 2143000 806080 0 765 1082;383 777 3526;3527;3528;3529 2450 2450 1 ASMLQEYSK TQTPSNDKASMLQEYS SMLQEYSKYLQQAFEK K A S S K Y 1 0 0 0 0 1 1 0 0 0 1 1 1 0 0 2 0 0 1 0 0 9 0 1055.4957 A6NF48;Q9Y2X9;F5H1Z5 A6NF48 626 634 ZNF281 Zinc finger protein 281 yes no 2 0.0043552 105.2 By matching By matching By matching By matching By matching By MS/MS 1 1 1397100 0 0 0 0 248590 1148500 766 19 778 3530;3531 2451 2451 1 ASMQPIQIAEGTGITTR DPQETLRRASMQPIQI EGTGITTRQQRKRVSL R A S T R Q 2 1 0 0 0 2 1 2 0 3 0 0 1 0 1 1 3 0 0 0 0 17 0 1772.9091 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9 Q14980-2 1954 1970 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 0.0037036 78.917 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 15910000 0 15910000 0 0 0 0 767 1121 779 3532;3533 2452;2453 2453 2 ASMQPIQIAEGTGITTRQQRK DPQETLRRASMQPIQI ITTRQQRKRVSLEPHQ R A S R K R 2 2 0 0 0 4 1 2 0 3 0 1 1 0 1 1 3 0 0 0 0 21 2 2313.2223 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9 Q14980-2 1954 1974 NUMA1 Nuclear mitotic apparatus protein 1 yes no 4 0.006538 42.679 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 15157000 6907600 1401400 0 1517200 0 5331000 768 1121 780 3534;3535;3536;3537 2454;2455 2454 2 ASMQQQQQLASAR QPTPVNIRASMQQQQQ QQQLASARNRRLAQQM R A S A R N 3 1 0 0 0 5 0 0 0 0 1 0 1 0 0 2 0 0 0 0 0 13 0 1445.7045 Q9Y3Y2-4;Q9Y3Y2;Q9Y3Y2-3 Q9Y3Y2-4 39 51 CHTOP Chromatin target of PRMT1 protein yes no 2 5.2218E-09 101.61 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 29121000 0 1815100 4298900 3110500 9279200 10617000 769 1649 781 3538;3539;3540;3541;3542 2456;2457;2458;2459 2459 4 ASNEDVTKAVDITTPK EDTDHEEKASNEDVTK AVDITTPKAARRGRKR K A S P K A 2 0 1 2 0 0 1 0 0 1 0 2 0 0 1 1 3 0 0 2 0 16 1 1687.8628 O75475;O75475-2 O75475 128 143 PSIP1 PC4 and SFRS1-interacting protein yes no 2;3 8.2833E-98 140.49 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 2 3 2 1 138200000 29736000 24316000 34302000 5571200 15924000 28351000 770 741 782 3543;3544;3545;3546;3547;3548;3549;3550;3551;3552;3553 2460;2461;2462;2463;2464;2465 2461 6 ASNLEGESNSSETPSTSTVWGGTCK KVEEETSKASNLEGES TVWGGTCKKEENDDDF K A S C K K 1 0 2 0 1 0 3 3 0 0 1 1 0 0 1 6 4 1 0 1 0 25 0 2585.1188 Q8N5C6 Q8N5C6 142 166 SRBD1 S1 RNA-binding domain-containing protein 1 yes yes 2;3 1.4725E-65 112.74 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 2 2 1 2 72915000 29027000 0 35894000 3471900 4521800 0 771 1302 783 3554;3555;3556;3557;3558;3559;3560 2466;2467;2468;2469;2470;2471 2467 6 ASNLLYGQLK ALLPELRRASNLLYGQ NLLYGQLKFGTLDCTV R A S L K F 1 0 1 0 0 1 0 1 0 0 3 1 0 0 0 1 0 0 1 0 0 10 0 1105.6132 Q8IXB1;Q8IXB1-2;F8W884 Q8IXB1 493 502 DNAJC10 DnaJ homolog subfamily C member 10 yes no 2 2.3531E-06 112.85 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 2 1 1 1 90926000 22379000 15786000 27793000 9965000 0 15003000 772 1287 784 3561;3562;3563;3564;3565;3566;3567 2472;2473;2474;2475 2475 4 ASNVTNKTDPR ________________ VTNKTDPRSMNSRVFI M A S P R S 1 1 2 1 0 0 0 0 0 0 0 1 0 0 1 1 2 0 0 1 0 11 1 1201.6051 G3V576;G3V4W0;B4DY08;G3V4C1;P07910-2;B2R603;G3V2Q1;P07910;P07910-3;G3V555;G3V575;P07910-4;G3V2H6;G3V4M8;Q569J8;G3V5X6;G3V3K6;G3V251;B4DSU6 G3V576 2 12 HNRNPC;HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 2 0.0011263 93.839 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 78104000 5581200 18318000 11237000 8031100 17386000 17551000 773 68 785 3568;3569;3570;3571;3572;3573 2476;2477;2478;2479;2480 2479 4 ASPGLLPVANGNSLNK GNGYVSARASPGLLPV ANGNSLNKVIPAKSPP R A S N K V 2 0 3 0 0 0 0 2 0 0 3 1 0 0 2 2 0 0 0 1 0 16 0 1550.8417 Q14814-6;Q14814-3;Q5T9U4;Q14814-5;Q14814-4;Q14814-2;Q14814 Q14814-6 184 199 MEF2D Myocyte-specific enhancer factor 2D yes no 2 0.019007 55.322 By matching By matching By matching By matching By matching By MS/MS 1 7573600 0 0 0 0 0 7573600 774 1116 786 3574 2481 2481 0 ASPQPALTVKAK KLGRGPAKASPQPALT PALTVKAKATSSATTA K A S A K A 3 0 0 0 0 1 0 0 0 0 1 2 0 0 2 1 1 0 0 1 0 12 1 1209.7081 Q8N9M1-3;Q8N9M1-2;Q8N9M1 Q8N9M1-3 164 175 C19orf47 Uncharacterized protein C19orf47 yes no 3 0.0018634 83.045 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 5889100 912610 1057700 787960 856840 947150 1326800 775 1310 787 3575;3576;3577;3578;3579;3580 2482 2482 1 ASPSGQNISYIHSSSESVTPR KLEAKTAKASPSGQNI SSESVTPRTEGRLQQK K A S P R T 1 1 1 0 0 1 1 1 1 2 0 0 0 0 2 7 1 0 1 1 0 21 0 2203.0505 Q9NZC9;H7C051;H7BYI2 Q9NZC9 197 217 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 yes no 3 0.0061132 42.639 By matching By MS/MS By matching By matching By matching By matching 1 1 2613300 0 2288700 324550 0 0 0 776 1567 788 3581;3582 2483 2483 1 ASPVTTSPTAATTQNPVLSK TKNQSLPKASPVTTSP TQNPVLSKLLMADQDS K A S S K L 3 0 1 0 0 1 0 0 0 0 1 1 0 0 3 3 5 0 0 2 0 20 0 1970.032 Q96JN0-2;Q96JN0 Q96JN0-2 36 55 LCOR Ligand-dependent corepressor yes no 2 0.0026863 48.919 By MS/MS By matching By matching By matching By matching By matching 1 1406800 1406800 0 0 0 0 0 777 1400 789 3583 2484 2484 1 ASQGLLSSIENSESDSSEAK RTRYQTRRASQGLLSS ESDSSEAKEEGSRKKR R A S A K E 2 0 1 1 0 1 3 1 0 1 2 1 0 0 0 7 0 0 0 0 0 20 0 2037.9338 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1541 1560 RIF1 Telomere-associated protein RIF1 yes no 2 4.9301E-53 118.84 By matching By MS/MS By matching By matching By matching By matching 1 14957000 0 14957000 0 0 0 0 778 1201 790 3584 2485;2486 2485 2 ASQNTSSSNSSTRGTQNQLR KKKEAALKASQNTSSS RGTQNQLRCELCDVSC K A S L R C 1 2 3 0 0 3 0 1 0 0 1 0 0 0 0 6 3 0 0 0 0 20 1 2122.9951 Q96KR1;B5MEH6 Q96KR1 364 383 ZFR Zinc finger RNA-binding protein yes no 3 0.00092307 54.768 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 70981000 10113000 12340000 17676000 5175600 9879900 15797000 779 1403 791 3585;3586;3587;3588;3589;3590 2487;2488 2488 2 ASQPDLVDTPTSSKPQPK KTTKVSYRASQPDLVD TSSKPQPKRSLRKADT R A S P K R 1 0 0 2 0 2 0 0 0 0 1 2 0 0 4 3 2 0 0 1 0 18 1 1894.9636 P46013;F5H4V4;P46013-2 P46013 1739 1756 MKI67 Antigen KI-67 no no 3 7.3695E-22 103.13 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 59986000 7532000 10268000 17291000 5652300 200710 19042000 780 919;920 792 3591;3592;3593;3594;3595;3596 2489;2490;2491;2492;2493;2494;2495 2490 6 ASQQQQTNSIRNYFQPSTKK SINKSKDRASQQQQTN YFQPSTKKRERDEENQ R A S K K R 1 1 2 0 0 5 0 0 0 1 0 2 0 1 1 3 2 0 1 0 0 20 2 2353.1775 O60934;F5H3R2 O60934 446 465 NBN Nibrin yes no 4 0.007578 42.044 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 11376000 2389300 1491700 1301000 1673900 1888600 2631800 781 736 793 3597;3598;3599;3600;3601;3602 2496 2496 1 ASQREGRLQQGNMR PEALLVGKASQREGRL RLQQGNMRKNVRVLSR K A S M R K 1 3 1 0 0 3 1 2 0 0 1 0 1 0 0 1 0 0 0 0 0 14 2 1629.8118 A6NL46 A6NL46 292 305 Putative UPF0607 protein ENSP00000332738 yes yes 2 0.017367 45.347 By matching By matching By matching By matching By matching By MS/MS 1 1 2749900 0 0 2060500 0 0 689380 782 28 794 3603;3604 2497 2497 5 1 ASSAAAAAALSR AAAGPSTRASSAAAAA AAAAALSRRGRRGRCD R A S S R R 7 1 0 0 0 0 0 0 0 0 1 0 0 0 0 3 0 0 0 0 0 12 0 1045.5516 Q8NCN4 Q8NCN4 10 21 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 2 4.0721E-08 106.54 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 12160000 1321000 1489500 0 868120 3278600 5202400 783 1318 795 3605;3606;3607;3608;3609 2498;2499;2500 2499 3 ASSASAPSSTPTGTTVVK HAADSPAKASSASAPS PTGTTVVKVTPDLKPT K A S V K V 3 0 0 0 0 0 0 1 0 0 0 1 0 0 2 5 4 0 0 2 0 18 0 1647.8315 Q6P4R8-3;Q6P4R8;Q6P4R8-2 Q6P4R8-3 1025 1042 NFRKB Nuclear factor related to kappa-B-binding protein yes no 2 1.4278E-22 106.31 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 2755400 0 0 986270 439600 0 1329600 784 1225 796 3610;3611;3612 2501;2502 2502 2 ASSDLEQLCSHVNEK ________________ LCSHVNEKIGNIKKTL M A S E K I 1 0 1 1 1 1 2 0 1 0 2 1 0 0 0 3 0 0 0 1 0 15 0 1715.7785 Q96BD8-2;Q96BD8 Q96BD8-2 2 16 SKA1 Spindle and kinetochore-associated protein 1 yes no 2 0.00038369 79.471 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 12306000 12306000 0 0 0 0 0 785 1372 797 3613;3614 2503;2504 2504 2 ASSLDDLRALKGK QGFSYQGRASSLDDLR DLRALKGKHFLLDPLM R A S G K H 2 1 0 2 0 0 0 1 0 0 3 2 0 0 0 2 0 0 0 0 0 13 2 1372.7674 C9JJU9;Q96P11-2;G3V0G9;Q96P11;Q96P11-4;Q96P11-3 C9JJU9 127 139 NSUN5 Putative methyltransferase NSUN5 yes no 3 7.8072E-05 97.163 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 67902000 9810500 18931000 6564200 6481000 7279700 18835000 786 255 798 3615;3616;3617;3618;3619;3620 2505;2506;2507;2508;2509;2510 2505 6 ASSLHRTSSGTSLSAMHSSGSSGK DISSFSSKASSLHRTS HSSGSSGKGAGPLRGK K A S G K G 2 1 0 0 0 0 0 3 2 0 2 1 1 0 0 10 2 0 0 0 0 24 1 2319.0873 Q12888;Q12888-2;A6NNK5;F8VY86 Q12888 1309 1332 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3;4 1.1478E-08 69.525 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 2 1 1 20477000 0 3189100 6142700 2683000 3559600 4902200 787 1063 799 3621;3622;3623;3624;3625;3626;3627;3628 2511;2512;2513;2514 2512 4 ASSLPSSAPAVK ESEVMRQKASSLPSSA PSSAPAVKLESLEETN K A S V K L 3 0 0 0 0 0 0 0 0 0 1 1 0 0 2 4 0 0 0 1 0 12 0 1113.603 Q5VUA4;Q5VUA4-2 Q5VUA4 567 578 ZNF318 Zinc finger protein 318 yes no 2 0.016043 54.005 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 6100700 0 993290 997040 590460 1193000 2326900 788 1205 800 3629;3630;3631;3632;3633 2515;2516 2516 2 ASSSSASSAGALESSLDRK GGGGGSSKASSSSASS LESSLDRKFQSVTNTM K A S R K F 4 1 0 1 0 0 1 1 0 0 2 1 0 0 0 8 0 0 0 0 0 19 1 1809.8704 Q5VT52-3;Q5VT52;B4E2Q6;Q5VT52-4 Q5VT52-3 12 30 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes no 3 5.2163E-11 93.342 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 6132600 0 1174500 1393600 781120 969930 1813400 789 1202 801 3634;3635;3636;3637;3638 2517;2518;2519;2520;2521;2522 2520 6 ASSVGNVADSTEPTK ________________ ADSTEPTKRMLSFQGL M A S T K R 2 0 1 1 0 0 1 1 0 0 0 1 0 0 1 3 2 0 0 2 0 15 0 1461.6947 O15294 O15294 2 16 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 5.2169E-05 88.311 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 12799000 0 2995400 3346000 1227200 0 5230800 790 705 802 3639;3640;3641;3642;3643 2523;2524;2525;2526;2527;2528 2523 6 ASSVGNVADSTEPTKR ________________ DSTEPTKRMLSFQGLA M A S K R M 2 1 1 1 0 0 1 1 0 0 0 1 0 0 1 3 2 0 0 2 0 16 1 1617.7958 O15294 O15294 2 17 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 2 7.4497E-05 88.108 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2369000 0 974420 1033200 361410 0 0 791 705 803 3644;3645;3646 2529 2529 1 ASTAASSALGFSK KPLKKRNRASTAASSA SSALGFSKSSSPSASL R A S S K S 4 0 0 0 0 0 0 1 0 0 1 1 0 1 0 4 1 0 0 0 0 13 0 1196.6037 O96028-5;O96028-3;O96028;H0Y9U6 O96028-5 603 615 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 2 6.544E-16 111.88 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 14941000 799560 2742000 2172400 1016300 2045500 6165500 792 779 804 3647;3648;3649;3650;3651;3652 2530;2531;2532;2533;2534 2532 5 ASTAPGAEASPSPCITER ASTSQGRKASTAPGAE PSPCITERSKQKARRR K A S E R S 4 1 0 0 1 0 2 1 0 1 0 0 0 0 3 3 2 0 0 0 0 18 0 1800.8312 Q66PJ3 Q66PJ3 169 186 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 yes yes 2 0.028288 36.214 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1153900 0 0 191780 0 484640 477480 793 1214 805 3653;3654;3655 2535 2535 1 ASTEEQYDLK ________________ TEEQYDLKIVKVEEDP M A S L K I 1 0 0 1 0 1 2 0 0 0 1 1 0 0 0 1 1 0 1 0 0 10 0 1182.5404 Q96LW9;C9J1X2;C9JH14;C9JHB1;C9JAI0;C9J6S7;C9JIC2;C9IYT1;C9JPM5 Q96LW9 2 11 ZSCAN31 Zinc finger and SCAN domain-containing protein 31 yes no 2 0.012271 60.691 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2 1 8713900 0 0 1746300 482780 1966200 4518600 794 1406 806 3656;3657;3658;3659;3660 2536;2537 2536 2 ASTEEQYDLKIVK ________________ QYDLKIVKVEEDPIWD M A S V K V 1 0 0 1 0 1 2 0 0 1 1 2 0 0 0 1 1 0 1 1 0 13 1 1522.7879 Q96LW9;C9J1X2;C9JH14;C9JHB1;C9JAI0;C9J6S7;C9JIC2;C9IYT1;C9JPM5 Q96LW9 2 14 ZSCAN31 Zinc finger and SCAN domain-containing protein 31 yes no 2 2.2083E-274 186.16 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 31414000 8193100 14251000 0 8969700 0 0 795 1406 807 3661;3662;3663 2538;2539 2538 2 ASTSDYQVISDRQTPK RPLATAYKASTSDYQV ISDRQTPKKDESLVSK K A S P K K 1 1 0 2 0 2 0 0 0 1 0 1 0 0 1 3 2 0 1 1 0 16 1 1794.8748 B4DYB4;Q8NFH5;B4DP57 B4DYB4 278 293 NUP35 Nucleoporin NUP53 yes no 3 0.00024538 84.753 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 9877400 787710 1572800 1563500 947670 1602900 3402800 796 144 808 3664;3665;3666;3667;3668;3669 2540;2541;2542;2543 2541 4 ASTSDYQVISDRQTPKK RPLATAYKASTSDYQV SDRQTPKKDESLVSKA K A S K K D 1 1 0 2 0 2 0 0 0 1 0 2 0 0 1 3 2 0 1 1 0 17 2 1922.9698 B4DYB4;Q8NFH5;B4DP57 B4DYB4 278 294 NUP35 Nucleoporin NUP53 yes no 3 0.022329 45.54 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 5005600 472940 689860 1383900 428850 1230300 799760 797 144 809 3670;3671;3672;3673;3674;3675 2544 2544 1 ASVEERITQVAKK MIYRFVTRASVEERIT RITQVAKKKMMLTHLV R A S K K K 2 1 0 0 0 1 2 0 0 1 0 2 0 0 0 1 1 0 0 2 0 13 2 1457.8202 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1152 1164 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.005549 81.525 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6969800 0 1014300 1593900 0 342070 4019500 798 486 810 3676;3677;3678;3679 2545 2545 1 ASVPSVQIQGQR PPLLLAPRASVPSVQI SVQIQGQRIIQQGLIR R A S Q R I 1 1 0 0 0 3 0 1 0 1 0 0 0 0 1 2 0 0 0 2 0 12 0 1268.6837 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7 Q86YP4 274 285 GATAD2A Transcriptional repressor p66-alpha yes no 2 0.0035674 69.216 By matching By MS/MS By matching By matching By matching By matching 1 1 1 12096000 0 2077000 2667900 0 0 7351200 799 170 811 3680;3681;3682 2546 2546 1 ASVSELACIYSALILHDDEVTVTEDKINALIK ________________ DKINALIKAAGVNVEP M A S I K A 4 0 1 3 1 0 3 0 1 4 4 2 0 0 0 3 2 0 1 3 0 32 1 3529.8226 P05386 P05386 2 33 RPLP1 60S acidic ribosomal protein P1 yes yes 3 4.0088E-106 117.96 By matching By MS/MS By matching By matching By matching By matching 1 94287000 0 94287000 0 0 0 0 800 796 812 3683 2547 2547 1 ASVTLSEAEK ________________ VTLSEAEKVYIVHGVQ M A S E K V 2 0 0 0 0 0 2 0 0 0 1 1 0 0 0 2 1 0 0 1 0 10 0 1033.5292 Q15024 Q15024 2 11 EXOSC7 Exosome complex component RRP42 yes yes 2 0.0046495 77.288 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 26063000 2094300 4573300 4492400 1786700 3503800 9612200 801 1127 813 3684;3685;3686;3687;3688;3689 2548;2549;2550 2549 3 ASYAEQLSMLK AQQLRAEKASYAEQLS AEQLSMLKKAHGLLAE K A S L K K 2 0 0 0 0 1 1 0 0 0 2 1 1 0 0 2 0 0 1 0 0 11 0 1239.6169 Q14980-2;Q14980;F5H2L0;H0YFY6;H0YH75 Q14980-2 1431 1441 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 5.8559E-14 118.77 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 2 68448000 0 31880000 7785500 0 8468100 20315000 802 1121 814;815 3690;3691;3692;3693;3694 2551;2552;2553;2554 2553 139 3 ASYAEQLSMLKK AQQLRAEKASYAEQLS EQLSMLKKAHGLLAEE K A S K K A 2 0 0 0 0 1 1 0 0 0 2 2 1 0 0 2 0 0 1 0 0 12 1 1367.7119 Q14980-2;Q14980;F5H2L0;H0YFY6;H0YH75 Q14980-2 1431 1442 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.0040589 61.235 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1636000 0 840520 0 795480 0 0 803 1121 816 3695;3696 2555;2556 2555 2 ATAAETSASEPEAESK ________________ SEPEAESKAGPKADGE M A T S K A 5 0 0 0 0 0 4 0 0 0 0 1 0 0 1 3 2 0 0 0 0 16 0 1577.7057 B7ZKM0;Q15020;F8VV04;Q15020-3;F8W667;Q15020-2 B7ZKM0 2 17 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 2 0.0098421 41.088 By matching By matching By matching By matching By matching By MS/MS 1 566530 0 0 0 0 0 566530 804 206 817 3697 2557 2557 1 ATAEEMTKYHSDEYIK MEIYRPHKATAEEMTK YHSDEYIKFLRSIRPD K A T I K F 2 0 0 1 0 0 3 0 1 1 0 2 1 0 0 1 2 0 2 0 0 16 1 1914.8669 Q92769;H3BM24;B3KRS5;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;E5RK19 Q92769 60 75 HDAC2 Histone deacetylase 2;Histone deacetylase yes no 3;4 4.7075E-164 159.12 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 3 106020000 4171200 9897200 21840000 3219200 8741300 58150000 805 1358 818;819 3698;3699;3700;3701;3702;3703;3704;3705;3706;3707;3708;3709;3710 2558;2559;2560;2561;2562;2563;2564;2565;2566;2567;2568 2565 151 9 ATANHAAELLAK LQKLTGQKATANHAAE HAAELLAKQFCTRGSP K A T A K Q 5 0 1 0 0 0 1 0 1 0 2 1 0 0 0 0 1 0 0 0 0 12 0 1208.6513 Q13415 Q13415 592 603 ORC1 Origin recognition complex subunit 1 yes yes 2;3 2.9445E-79 143.76 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 2 2 71324000 5135000 8570400 12027000 5014300 10963000 29615000 806 1080 820 3711;3712;3713;3714;3715;3716;3717;3718;3719;3720;3721;3722;3723;3724 2569;2570;2571;2572;2573;2574;2575;2576;2577;2578;2579;2580 2571 12 ATAPAYKPGRGTGVNSNSEK RTCTADSKATAPAYKP GVNSNSEKHADHRSTL K A T E K H 3 1 2 0 0 0 1 3 0 0 0 2 0 0 2 2 2 0 1 1 0 20 2 2004.0025 Q8NFC6 Q8NFC6 1176 1195 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 4 0.001241 47.082 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 12312000 1254400 1671200 1623600 1634600 1993100 4135000 807 1325 821 3725;3726;3727;3728;3729;3730 2581;2582;2583 2581 2 ATAPVPTVGEGYGYGHESELSQASAAAR RDRSPLRRATAPVPTV SQASAAARNSLYDMAR R A T A R N 6 1 0 0 0 1 3 4 1 0 1 0 0 0 2 3 2 0 2 2 0 28 0 2775.31 Q9BWF3;E9PB51;B0LM41 Q9BWF3 314 341 RBM4;RBM14 RNA-binding protein 4;RNA-binding protein 14 yes no 3 3.1919E-12 62.108 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 44915000 0 22472000 0 0 0 22443000 808 1457 822 3731;3732 2584;2585 2585 2 ATASGIMGSPKPAIK NLKQHLAKATASGIMG GSPKPAIKSISASALL K A T I K S 3 0 0 0 0 0 0 2 0 2 0 2 1 0 2 2 1 0 0 0 0 15 1 1427.7806 Q5T670;Q7L590-2;Q7L590 Q5T670 539 553 MCM10 Protein MCM10 homolog yes no 3 0.00062793 73.877 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 2480300 0 884480 0 1595800 0 0 809 1193 823 3733;3734;3735;3736 2586;2587;2588;2589 2586 4 ATAVMPDGQFK GHPAPNFKATAVMPDG VMPDGQFKDISLSDYK K A T F K D 2 0 0 1 0 1 0 1 0 0 0 1 1 1 1 0 1 0 0 1 0 11 0 1163.5645 Q06830 Q06830 17 27 PRDX1 Peroxiredoxin-1 yes yes 2 0.0047468 75.416 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 202030000 5377900 26820000 13068000 12908000 36408000 107450000 810 1044 824 3737;3738;3739;3740;3741;3742 2590;2591;2592;2593;2594 2594 5 ATAVMPDGQFKDISLSDYKGK GHPAPNFKATAVMPDG SLSDYKGKYVVFFFYP K A T G K Y 2 0 0 3 0 1 0 2 0 1 1 3 1 1 1 2 1 0 1 1 0 21 2 2270.1253 Q06830 Q06830 17 37 PRDX1 Peroxiredoxin-1 yes yes 3;4 4.9049E-91 128.44 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 1 2 2 321260000 49966000 84719000 97780000 4541700 16301000 67956000 811 1044 825;826 3743;3744;3745;3746;3747;3748;3749;3750;3751;3752;3753 2595;2596;2597;2598;2599;2600;2601;2602;2603;2604 2599 123 10 ATCAPQHGAPGPGPADASK VFVDSLTKATCAPQHG PGPADASKVVAKGLGL K A T S K V 5 0 0 1 1 1 0 3 1 0 0 1 0 0 4 1 1 0 0 0 0 19 0 1788.8213 Q5HY54;P21333-2;P21333;A6NDY9;E9PHF0 Q5HY54 2501 2519 FLNA Filamin-A yes no 3 0.00035432 79.462 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 19581000 2228200 3879300 4624600 1603400 2914700 4331100 812 860 827 3754;3755;3756;3757;3758;3759 2605;2606;2607;2608;2609;2610 2608 6 ATCFAYGQTGSGK QTIFEGGKATCFAYGQ YGQTGSGKTHTMGGDL K A T G K T 2 0 0 0 1 1 0 3 0 0 0 1 0 1 0 1 2 0 1 0 0 13 0 1346.5925 B7Z6Q6;Q99661;Q99661-2;Q5JR91;B7Z7M6 B7Z6Q6 301 313 KIF2C Kinesin-like protein KIF2C yes no 2 2.0906E-05 86.803 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 183000000 24112000 24858000 29025000 12282000 33568000 59153000 813 193 828 3760;3761;3762;3763;3764;3765;3766 2611;2612;2613;2614;2615;2616;2617 2613 7 ATCFAYGQTGSGKTHTMGGDLSGK QTIFEGGKATCFAYGQ MGGDLSGKAQNASKGI K A T G K A 2 0 0 1 1 1 0 6 1 0 1 2 1 1 0 2 4 0 1 0 0 24 1 2431.0896 B7Z6Q6;Q99661;Q99661-2;Q5JR91;B7Z7M6 B7Z6Q6 301 324 KIF2C Kinesin-like protein KIF2C yes no 3;4 0.0011734 52.095 By MS/MS By matching By MS/MS By matching By matching By matching 1 2 2 2 1 16711000 4415000 0 6035900 2818700 1864400 1577000 814 193 829 3767;3768;3769;3770;3771;3772;3773;3774 2618;2619 2619 2 ATDENPCGIDSECINR EIPRCNCKATDENPCG IDSECINRMLLYECHP K A T N R M 1 1 2 2 2 0 2 1 0 2 0 0 0 0 1 1 1 0 0 0 0 16 0 1849.7571 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 1630 1645 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 2 0.00023404 69.379 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 5713600 0 1182700 922340 0 1204000 2404600 815 1404 830 3775;3776;3777;3778 2620;2621;2622 2621 2 ATDLGGTSQAGTSQR RPPSGSSKATDLGGTS SQAGTSQRFLENGSQE K A T Q R F 2 1 0 1 0 2 0 3 0 0 1 0 0 0 0 2 3 0 0 0 0 15 0 1448.6855 F5H1W0;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4;C9J6P4 F5H1W0 75 89 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.0025192 66.022 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1115700 0 0 269520 0 278460 567780 816 231 831 3779;3780;3781 2623;2624 2623 2 ATDLILDHIRER LLPLLLDRATDLILDH ILDHIRERSQGPSLGP R A T E R S 1 2 0 2 0 0 1 0 1 2 2 0 0 0 0 0 1 0 0 0 0 12 1 1450.7892 Q86Y79 Q86Y79 195 206 PTRH1 Probable peptidyl-tRNA hydrolase yes yes 3 0.029744 47.894 By matching By matching By matching By matching By matching By MS/MS 1 1 3501400 0 648470 0 0 0 2852900 817 1273 832 3782;3783 2625 2625 1 ATDTSQGELVHPK ________________ QGELVHPKALPLIVGA M A T P K A 1 0 0 1 0 1 1 1 1 0 1 1 0 0 1 1 2 0 0 1 0 13 0 1381.6838 Q5SSJ5;B0QZK9;B0QZK8;Q5SSJ5-5 Q5SSJ5 2 14 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 2 2.1801E-91 146.77 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 13045000 1919800 1853900 2283400 612380 4443000 1932800 818 1186 833 3784;3785;3786;3787;3788;3789 2626;2627;2628;2629;2630 2629 5 ATEATAMAMGR GPTQGLLRATEATAMA ATAMAMGRGEGLVGDG R A T G R G 4 1 0 0 0 0 1 1 0 0 0 0 2 0 0 0 2 0 0 0 0 11 0 1108.5005 Q86YP4;B5MC40;Q86YP4-2;C9JHD7;C9JJK9;C9JVY3;C9JMI3;C9JGN4 Q86YP4 63 73 GATAD2A Transcriptional repressor p66-alpha yes no 2 0.0018545 90.05 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 4047900 0 705280 827460 0 0 2515100 819 170 834 3790;3791;3792 2631;2632 2632 1 ATEEKKPETEAAR ________________ KPETEAARAQPTPSSS M A T A R A 3 1 0 0 0 0 4 0 0 0 0 2 0 0 1 0 2 0 0 0 0 13 2 1458.7314 P61964 P61964 2 14 WDR5 WD repeat-containing protein 5 yes yes 3 0.0041957 62.732 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 32096000 4234800 6058500 5458700 2826300 5115200 8402700 820 983 835 3793;3794;3795;3796;3797;3798 2633;2634;2635;2636;2637;2638 2637 6 ATEHPEPPK ________________ TEHPEPPKAELQLPPP M A T P K A 1 0 0 0 0 0 2 0 1 0 0 1 0 0 3 0 1 0 0 0 0 9 0 1004.4927 Q13435;E9PPJ0;E9PJ04;E9PJT3 Q13435 2 10 SF3B2 Splicing factor 3B subunit 2 yes no 2 4.703E-30 135.71 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 4513800 781320 1040800 208820 0 860400 1622500 821 1083 836 3799;3800;3801;3802;3803 2639;2640;2641 2639 3 ATEISTAVVQR STKGIKRKATEISTAV ISTAVVQRSATIGSSP K A T Q R S 2 1 0 0 0 1 1 0 0 1 0 0 0 0 0 1 2 0 0 2 0 11 0 1173.6354 Q8N3X1;Q8N3X1-2 Q8N3X1 793 803 FNBP4 Formin-binding protein 4 yes no 2 5.7579E-13 116.55 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2 1 15878000 2857700 2153000 1533700 1165100 3488900 4680100 822 1298 837 3804;3805;3806;3807;3808;3809;3810;3811 2642;2643;2644;2645;2646 2645 5 ATEYIQYMR SRAQILDKATEYIQYM TEYIQYMRRKNHTHQQ K A T M R R 1 1 0 0 0 1 1 0 0 1 0 0 1 0 0 0 1 0 2 0 0 9 0 1173.5488 P61244-2;P61244;G3V5L1;Q6V3B1;P61244-3;G3V563;G3V2R5;P61244-4;E7ESS7 P61244-2 58 66 MAX Protein max yes no 2 0.0091454 99.136 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4188500 0 336970 1022100 459300 0 2370100 823 981 838 3812;3813;3814;3815 2647;2648 2648 2 ATFDAISK ATLGNFAKATFDAISK ATFDAISKTYSYLTPD K A T S K T 2 0 0 1 0 0 0 0 0 1 0 1 0 1 0 1 1 0 0 0 0 8 0 851.43888 P15880;H0YEN5;E9PQD7 P15880 239 246 RPS2 40S ribosomal protein S2 yes no 2 4.0119E-16 129.42 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 59216000 0 6352600 0 16657000 23625000 12582000 824 839 839 3816;3817;3818;3819 2649;2650;2651 2651 3 ATFIKVPQNQNGK TLQEVFEKATFIKVPQ VPQNQNGKSKGYAFIE K A T G K S 1 0 2 0 0 2 0 1 0 1 0 2 0 1 1 0 1 0 0 1 0 13 1 1443.7834 E7EX81;P19338;H7BY16;Q9BQ02 E7EX81 401 413 NCL Nucleolin yes no 2;3 0.0011436 77.387 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 18909000 4023900 3346400 1145300 876750 5045800 4471300 825 397 840 3820;3821;3822;3823;3824;3825;3826 2652;2653;2654;2655;2656 2656 5 ATFSEFAAK EEAKFNPRATFSEFAA TFSEFAAKHAKDSRFK R A T A K H 3 0 0 0 0 0 1 0 0 0 0 1 0 2 0 1 1 0 0 0 0 9 0 970.476 O14776-2;O14776;G3V220 O14776-2 724 732 TCERG1 Transcription elongation regulator 1 yes no 2 0.0099044 100.02 By matching By matching By matching By matching By matching By MS/MS 1 3705200 0 0 0 0 0 3705200 826 696 841 3827 2657 2657 1 ATFYGEQVDYYK TYAALNSKATFYGEQV GEQVDYYKSYIKTCLD K A T Y K S 1 0 0 1 0 1 1 1 0 0 0 1 0 1 0 0 1 0 3 1 0 12 0 1482.6667 P46940;H0YLE8 P46940 1517 1528 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 2 2.4956E-81 148.78 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 83657000 0 15171000 14868000 9883900 5812700 37921000 827 929 842 3828;3829;3830;3831;3832 2658;2659;2660;2661 2661 3 ATGANATPLDFPSKK ________________ PLDFPSKKRKRSRWNQ M A T K K R 3 0 1 1 0 0 0 1 0 0 1 2 0 1 2 1 2 0 0 0 0 15 1 1516.7886 Q15637-6;Q15637-4;Q15637-3;Q15637-2;Q15637;Q14820;F8WEV5 Q15637-6 2 16 SF1 Splicing factor 1 yes no 2 2.1144E-229 176.43 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 7 1 313930000 122580000 16603000 67507000 15319000 33470000 58456000 828 1141 843 3833;3834;3835;3836;3837;3838;3839;3840;3841;3842;3843;3844;3845 2662;2663;2664;2665;2666;2667;2668;2669;2670;2671;2672;2673;2674;2675 2675 14 ATGANATPLDFPSKKR ________________ LDFPSKKRKRSRWNQD M A T K R K 3 1 1 1 0 0 0 1 0 0 1 2 0 1 2 1 2 0 0 0 0 16 2 1672.8897 Q15637-6;Q15637-4;Q15637-3;Q15637-2;Q15637;Q14820;F8WEV5 Q15637-6 2 17 SF1 Splicing factor 1 yes no 3 0.0023003 60.55 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 15405000 4159900 1749700 4236100 2430800 2828700 0 829 1141 844 3846;3847;3848;3849;3850 2676;2677;2678 2678 3 ATGAQDFSDCCGQKPTGPGGPLIQNVHASK SRPMPEPKATGAQDFS IQNVHASKRILFSIVH K A T S K R 3 0 1 2 2 3 0 5 1 1 1 2 0 1 3 2 2 0 0 1 0 30 1 3097.4346 Q9UHL9-2;Q9UHL9;E9PFE2;Q9UHL9-3 Q9UHL9-2 295 324 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 yes no 4 1.3612E-77 111.27 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 20670000 8125800 1614000 6918200 0 0 4012100 830 427 845 3851;3852;3853;3854 2679;2680;2681;2682 2680 4 ATGGGLSSVGGGSSTIK GFSSSSGRATGGGLSS GGGSSTIKYTTTSSSS R A T I K Y 1 0 0 0 0 0 0 6 0 1 1 1 0 0 0 4 2 0 0 1 0 17 0 1434.7314 P04259;CON__P04259;F5H6G5 P04259 534 550 KRT6B Keratin, type II cytoskeletal 6B yes no 2 0.030213 37.687 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 11646000 485820 972110 933390 2432000 6822300 0 + 831 788 846 3855;3856;3857;3858;3859 2683 2683 1 ATGNDLRPPPPSPSSDLTHPMK KKASTLWRATGNDLRP SDLTHPMKTSHPVVAS R A T M K T 1 1 1 2 0 0 0 1 1 0 2 1 1 0 6 3 2 0 0 0 0 22 1 2314.1376 Q9P275;Q9P275-2;E9PEW0 Q9P275 702 723 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 4 0.00071309 51.876 By matching By matching By MS/MS By matching By matching By MS/MS 1 2 1 2 14232000 0 1745200 2458000 0 1173600 8855100 832 1576 847 3860;3861;3862;3863;3864;3865 2684;2685;2686 2685 1 ATHRLLLLGAGESGK QKDKQVYRATHRLLLL LGAGESGKSTIVKQMR R A T G K S 2 1 0 0 0 0 1 3 1 0 4 1 0 0 0 1 1 0 0 0 0 15 1 1521.8627 P63092-2;A2A2R6;P38405;P63092;Q5JWD1;A6NI00;P63092-3 P63092 39 53 GNAS;GNAL Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(olf) subunit alpha no no 3 0.00052677 72.428 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 6458700 0 411150 1402500 588820 542940 3513300 833 1000;1001;1002 848 3866;3867;3868;3869;3870 2687 2687 1 ATIAGGGVIPHIHK EELDSLIKATIAGGGV GVIPHIHKSLIGKKGQ K A T H K S 2 0 0 0 0 0 0 3 2 3 0 1 0 0 1 0 1 0 0 1 0 14 0 1369.783 Q71UI9;P0C0S5;A6NKY0;A6NFA8 Q71UI9 103 116 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z yes no 3 0.00013775 78.705 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 19365000 0 3445400 2464500 1279000 4430000 7745600 834 816 849 3871;3872;3873;3874;3875 2688;2689 2689 1 ATILNTENLSSTPAPK LEGVPVGKATILNTEN LSSTPAPKYLKILPSG K A T P K Y 2 0 2 0 0 0 1 0 0 1 2 1 0 0 2 2 3 0 0 0 0 16 0 1655.873 Q6PJP8 Q6PJP8 518 533 DCLRE1A DNA cross-link repair 1A protein yes yes 2 2.8401E-11 95.662 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 12350000 6079300 0 0 681000 0 5589700 835 1232 850 3876;3877;3878 2690;2691;2692;2693 2692 4 ATKIPCESPPLEVVDTTASTK QESLTAGKATKIPCES VDTTASTKRHLRTRVQ K A T T K R 2 0 0 1 1 0 2 0 0 1 1 2 0 0 3 2 4 0 0 2 0 21 1 2243.1355 P46013;F5H4V4;P46013-2 P46013 2701 2721 MKI67 Antigen KI-67 no no 3 1.7987E-280 170.02 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 2 775820000 139390000 436750000 120870000 66919000 11894000 0 836 919;920 851 3879;3880;3881;3882;3883;3884 2694;2695;2696;2697 2694 4 ATLLQQR CILKRGQKATLLQQRR KATLLQQRREGEMKEI K A T Q R R 1 1 0 0 0 2 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 7 0 828.48175 P46013;F5H4V4;P46013-2 P46013 911 917 MKI67 Antigen KI-67 no no 2 0.020995 88.029 By matching By matching By MS/MS By matching By matching By matching 1 1 4411700 912530 0 3499100 0 0 0 837 919;920 852 3885;3886 2698 2698 1 ATNFLAHEK ________________ TNFLAHEKIWFDKFKY M A T E K I 2 0 1 0 0 0 1 0 1 0 1 1 0 1 0 0 1 0 0 0 0 9 0 1029.5243 E9PK01;P29692;E9PMW7;E9PPR1;E9PL12;E9PQ49;E9PI39;E9PQZ1;P29692-3;E9PBQ9;P29692-2;E9PRY8;E9PNW6;E9PKK3;E9PK72;E9PJD0;E9PN91;E9PIZ1;E9PK06;E9PL71;H0YCK7 E9PK01 2 10 EEF1D Elongation factor 1-delta yes no 2 0.024517 57.885 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 13394000 0 2230500 1763700 2370600 1014600 6014700 838 451 853 3887;3888;3889;3890;3891 2699;2700 2699 2 ATNVCTRFEDSPSYVK ELLTESSKATNVCTRF EDSPSYVKWGKLRDYQ K A T V K W 1 1 1 1 1 0 1 0 0 0 0 1 0 1 1 2 2 0 1 2 0 16 1 1872.8676 F5GZI1;O60264 F5GZI1 104 119 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 3 0.0037016 65.038 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 6529000 0 1408200 1226600 350800 582860 2960600 839 500 854 3892;3893;3894;3895;3896 2701;2702;2703 2702 3 ATPLAAPAGSLSR ________________ APAGSLSRKKRLELDD R A T S R K 4 1 0 0 0 0 0 1 0 0 2 0 0 0 2 2 1 0 0 0 0 13 0 1210.667 B0QYQ2;Q96RU7 B0QYQ2 3 15 TRIB3 Tribbles homolog 3 yes no 2 0.0019703 72.705 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 9881200 0 704740 504120 2273000 6399300 0 840 57 855 3897;3898;3899;3900 2704 2704 1 ATPLFIAAQEGHTK VNCQALDKATPLFIAA AAQEGHTKCVELLLSS K A T T K C 3 0 0 0 0 1 1 1 1 1 1 1 0 1 1 0 2 0 0 0 0 14 0 1482.7831 B4DZX6;Q9Y575-2;H7BYZ6;Q9Y575;G8JLA9 B4DZX6 130 143 ASB3;GPR75-ASB3 Ankyrin repeat and SOCS box protein 3 yes no 3 0.0032153 58.626 By matching By matching By matching By matching By matching By MS/MS 1 1 5986200 0 1631700 0 0 0 4354400 841 150 856 3901;3902 2705 2705 1 ATPRLASTNSSVLGADLPSSMKEK EAEAETAKATPRLAST LPSSMKEKAKAETEKA K A T E K A 3 1 1 1 0 0 1 1 0 0 3 2 1 0 2 5 2 0 0 1 0 24 2 2459.269 Q13428-7;E7ETY2;Q13428-6;Q13428-5;H0YA99;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 101 124 TCOF1 Treacle protein no no 3;4 9.1873E-69 116.94 By MS/MS By MS/MS By matching By MS/MS By matching By matching 2 2 2 224130000 32811000 105560000 0 85764000 0 0 842 1082;383 857;858 3903;3904;3905;3906;3907;3908 2706;2707;2708;2709;2710 2707 43 5 ATQETSFDFK FCNQLKHKATQETSFD QETSFDFKCSQSRLKT K A T F K C 1 0 0 1 0 1 1 0 0 0 0 1 0 2 0 1 2 0 0 0 0 10 0 1172.535 A8MVI8;Q6NW34-2;Q6NW34 A8MVI8 187 196 C3orf17 Uncharacterized protein C3orf17 yes no 2 0.0088159 78.488 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 11644000 1112400 1489900 0 2142000 0 6899500 843 49 859 3909;3910;3911;3912 2711;2712;2713 2712 3 ATQQQHDFTLTQTADGR WPVAGQIRATQQQHDF LTQTADGRSSFDWLTG R A T G R S 2 1 0 2 0 4 0 1 1 0 1 0 0 1 0 0 4 0 0 0 0 17 0 1916.8977 P78527;E7EUY0;P78527-2 P78527 2637 2653 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 0.00023016 83.964 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 13289000 328650 3822700 0 730060 2556900 5851000 844 1012 860 3913;3914;3915;3916;3917 2714;2715;2716 2715 3 ATQRDLDNAGELGR FRNVNTRRATQRDLDN DNAGELGRSRGEQEGD R A T G R S 2 2 1 2 0 1 1 2 0 0 2 0 0 0 0 0 1 0 0 0 0 14 1 1514.7437 B9ZVN9;O95602 B9ZVN9 1372 1385 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 yes no 3 0.0011291 71.529 By matching By matching By matching By matching By matching By MS/MS 1 1 2488900 0 0 0 0 1178100 1310800 845 218 861 3918;3919 2717 2717 1 ATSEEDVSIKSPICEK ENQSHDYKATSEEDVS IKSPICEKQDESNTVI K A T E K Q 1 0 0 1 1 0 3 0 0 2 0 2 0 0 1 3 1 0 0 1 0 16 1 1791.856 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1606 1621 RIF1 Telomere-associated protein RIF1 yes no 3 0.013096 43.764 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 5170000 0 2318900 1187000 0 0 1664000 846 1201 862 3920;3921;3922 2718;2719 2718 2 ATSMAAASGRFESAK ________________ SGRFESAKSIEERKEQ M A T A K S 5 1 0 0 0 0 1 1 0 0 0 1 1 1 0 3 1 0 0 0 0 15 1 1483.7089 Q2TBE0-3;Q2TBE0-2;Q2TBE0 Q2TBE0-3 2 16 CWF19L2 CWF19-like protein 2 yes no 2 0.00014785 88.108 By MS/MS By matching By matching By matching By matching By matching 1 1239800 1239800 0 0 0 0 0 847 1163 863 3923 2720 2720 1 ATSSATTAAAPTLR PALTVKAKATSSATTA TAAAPTLRRLALSSRS K A T L R R 5 1 0 0 0 0 0 0 0 0 1 0 0 0 1 2 4 0 0 0 0 14 0 1317.6888 Q8N9M1-3;Q8N9M1-2;Q8N9M1 Q8N9M1-3 176 189 C19orf47 Uncharacterized protein C19orf47 yes no 2 0.012372 49.188 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1806200 0 107300 415440 168590 486970 627920 848 1310 864 3924;3925;3926;3927;3928 2721 2721 1 ATSSATTAAAPTLRR PALTVKAKATSSATTA AAAPTLRRLALSSRSG K A T R R L 5 2 0 0 0 0 0 0 0 0 1 0 0 0 1 2 4 0 0 0 0 15 1 1473.79 Q8N9M1-3;Q8N9M1-2;Q8N9M1 Q8N9M1-3 176 190 C19orf47 Uncharacterized protein C19orf47 yes no 3 1.5911E-30 113.24 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 8621900 1653300 1048900 819480 1003000 1744700 2352600 849 1310 865 3929;3930;3931;3932;3933;3934 2722;2723;2724 2723 3 ATTATMATSGSAR ________________ MATSGSARKRLLKEED M A T A R K 4 1 0 0 0 0 0 1 0 0 0 0 1 0 0 2 4 0 0 0 0 13 0 1224.5768 I3L2M0;I3L2Z3;I3L3H2;I3L3F6;P38919 I3L2M0 2 14 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 2 0.0095262 49.62 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 2551000 434520 0 0 0 1281300 835090 850 684 866 3935;3936;3937 2725;2726 2726 2 ATTATMATSGSARK ________________ ATSGSARKRLLKEEDM M A T R K R 4 1 0 0 0 0 0 1 0 0 0 1 1 0 0 2 4 0 0 0 0 14 1 1352.6718 I3L2M0;I3L2Z3;I3L3H2;I3L3F6;P38919 I3L2M0 2 15 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 2 1.2319E-07 97.273 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 1 1 2 2 55763000 13047000 3897100 4918300 4407700 19144000 10349000 851 684 867;868 3938;3939;3940;3941;3942;3943;3944;3945;3946;3947 2727;2728;2729;2730;2731;2732;2733;2734 2729 67 8 ATVAVSEEHCAPGATSVR GAVVSSHKATVAVSEE APGATSVRAIKAAIWE K A T V R A 4 1 0 0 1 0 2 1 1 0 0 0 0 0 1 2 2 0 0 3 0 18 0 1840.8738 Q9BY89 Q9BY89 833 850 KIAA1671 Uncharacterized protein KIAA1671 yes yes 3 0.00062232 80.488 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2868400 0 1112800 0 0 0 1755600 852 1466 869 3948;3949 2735;2736;2737;2738 2737 4 ATVEKPSNPFSGDLQK QWAALEGKATVEKPSN PFSGDLQKTFEIEL__ K A T Q K T 1 0 1 1 0 1 1 1 0 0 1 2 0 1 2 2 1 0 0 1 0 16 1 1716.8683 Q9Y6R0 Q9Y6R0 588 603 NUMBL Numb-like protein yes yes 3 0.00037752 71.031 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 1 1 2 1 17382000 2391600 3503200 2046700 1378000 4984300 3077900 853 1661 870 3950;3951;3952;3953;3954;3955;3956;3957 2739;2740;2741;2742;2743 2743 4 ATVQQLEGR ________________ TVQQLEGRWRLVDSKG M A T G R W 1 1 0 0 0 2 1 1 0 0 1 0 0 0 0 0 1 0 0 1 0 9 0 1000.5302 Q01469 Q01469 2 10 FABP5 Fatty acid-binding protein, epidermal yes yes 2 0.02222 59.067 By matching By MS/MS By matching By matching By matching By matching 1 1 2674500 748060 1926500 0 0 0 0 854 1027 871 3958;3959 2744 2744 1 ATVTATTKVPEIR ________________ TTKVPEIRDVTRIERI M A T I R D 2 1 0 0 0 0 1 0 0 1 0 1 0 0 1 0 4 0 0 2 0 13 1 1385.7878 Q9Y230 Q9Y230 2 14 RUVBL2 RuvB-like 2 yes yes 2 1.3403E-90 143.58 By matching By matching By matching By matching By matching By MS/MS 1 1 1 10889000 0 2719700 0 833670 0 7335400 855 1627 872 3960;3961;3962 2745 2745 1 ATVTATTKVPEIRDVTR ________________ PEIRDVTRIERIGAHS M A T T R I 2 2 0 1 0 0 1 0 0 1 0 1 0 0 1 0 5 0 0 3 0 17 2 1857.032 Q9Y230 Q9Y230 2 18 RUVBL2 RuvB-like 2 yes yes 3 0 195.87 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 396430000 49309000 253090000 10845000 49427000 1737300 32013000 856 1627 873 3963;3964;3965;3966;3967;3968 2746;2747;2748;2749;2750;2751 2749 6 ATYVNSQATGER SPDSVKSKATYVNSQA NSQATGERRLANKIEH K A T E R R 2 1 1 0 0 1 1 1 0 0 0 0 0 0 0 1 2 0 1 1 0 12 0 1295.6106 Q15652-2;Q15652-3;Q15652 Q15652-2 441 452 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes no 2 0.013365 56.205 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1950200 361170 0 0 0 601960 987090 857 1144 874 3969;3970;3971 2752;2753;2754 2753 3 AVAASKERNGLSLAALK PVSELITKAVAASKER GLSLAALKKALAAGGY K A V L K K 5 1 1 0 0 0 1 1 0 0 3 2 0 0 0 2 0 0 0 1 0 17 2 1697.9788 P16401 P16401 50 66 HIST1H1B Histone H1.5 yes yes 3;4 0.003597 79.804 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 2 1 2 2 32917000 2308700 2001800 9125700 2647400 7929700 8903700 858 842 875 3972;3973;3974;3975;3976;3977;3978;3979;3980 2755;2756;2757;2758;2759;2760 2756 6 AVAASKERSGVSLAALK PVSELITKAVAASKER GVSLAALKKALAAAGY K A V L K K 5 1 0 0 0 0 1 1 0 0 2 2 0 0 0 3 0 0 0 2 0 17 2 1656.9523 P16403;P10412;P16402 P10412 47 63 HIST1H1C;HIST1H1E;HIST1H1D Histone H1.2;Histone H1.4;Histone H1.3 no no 3;4 0.001162 71.08 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 3 2 66679000 26215000 5326900 9585000 11702000 10886000 2964000 859 818;843 876 3981;3982;3983;3984;3985;3986;3987;3988;3989;3990;3991;3992 2761;2762;2763;2764;2765;2766;2767;2768 2767 7 AVADRLLEMTSRK PLLQFDYKAVADRLLE LLEMTSRKNTPHFNRK K A V R K N 2 2 0 1 0 0 1 0 0 0 2 1 1 0 0 1 1 0 0 1 0 13 2 1488.8082 Q14684-2;Q14684 Q14684-2 284 296 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 3 0.0051081 74.475 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 30204000 0 5127900 13442000 2877200 8757000 0 860 1111 877 3993;3994;3995;3996 2769;2770;2771 2769 3 AVAEFLNRQHSDPNEQVTRK CETEFPAKAVAEFLNR PNEQVTRKNMLLATKQ K A V R K N 2 2 2 1 0 2 2 0 1 0 1 1 0 1 1 1 1 0 0 2 0 20 2 2338.1778 P05549-5;Q5TAV5;P05549 P05549-5 310 329 TFAP2A Transcription factor AP-2-alpha yes no 4 0.0014767 51.786 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 25142000 0 2810300 4539900 5659800 7845400 4286100 861 797 878 3997;3998;3999;4000;4001 2772;2773 2773 2 AVAILCNHQRAPPK LSYNRANRAVAILCNH NHQRAPPKTFEKSMMN R A V P K T 3 1 1 0 1 1 0 0 1 1 1 1 0 0 2 0 0 0 0 1 0 14 1 1573.8511 P11387 P11387 625 638 TOP1 DNA topoisomerase 1 yes yes 3 0.014107 61.419 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1975700 444900 0 0 0 1530800 0 862 825 879 4002;4003 2774;2775 2774 1 AVALDSDNISLK EKEKAKAKAVALDSDN DSDNISLKSIGSPEST K A V L K S 2 0 1 2 0 0 0 0 0 1 2 1 0 0 0 2 0 0 0 1 0 12 0 1244.6612 A8MYI2;H0Y6F6;Q8NEY1-6;Q8NEY1-5;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1 A8MYI2 253 264 NAV1 Neuron navigator 1 yes no 2 0.0055041 63.864 By matching By MS/MS By matching By matching By matching By matching 1 1 1339600 0 464050 0 0 0 875510 863 53 880 4004;4005 2776 2776 1 AVANMQGEMDRK EKRQAVNKAVANMQGE MQGEMDRKCKQVKEKC K A V R K C 2 1 1 1 0 1 1 1 0 0 0 1 2 0 0 0 0 0 0 1 0 12 1 1348.6228 B7Z3Z1;F5H449;Q5BJG6;B7Z293;B0QZE2;Q5VUI0;Q15326;F6UH50;Q2LD45;E7ENI9 B7Z3Z1 311 322 ZMYND11 Zinc finger MYND domain-containing protein 11 yes no 3 0.0060583 57.567 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2316600 402220 0 0 0 841510 1072900 864 58 881 4006;4007;4008 2777 2777 1 AVATWHANTEREQK GKIQKLSKAVATWHAN ANTEREQKKETERIEK K A V Q K K 3 1 1 0 0 1 2 0 1 0 0 1 0 0 0 0 2 1 0 1 0 14 1 1639.8067 P51531-2;P51531;F6VDE0 P51531-2 479 492 SMARCA2 Probable global transcription activator SNF2L2 yes no 3;4 0.0026422 63.091 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 2 2 2 2 14438000 831340 1297600 4013400 2269700 1491500 4534800 865 951 882 4009;4010;4011;4012;4013;4014;4015;4016;4017;4018 2778;2779;2780;2781;2782 2778 4 AVATYHANTEREQK GKIQKLTKAVATYHAN ANTEREQKKENERIEK K A V Q K K 3 1 1 0 0 1 2 0 1 0 0 1 0 0 0 0 2 0 1 1 0 14 1 1616.7907 P51532-5;P51532-2;P51532-3;P51532-4;P51532;Q9HBD4;F5H0X5 P51532-5 503 516 SMARCA4 Transcription activator BRG1 yes no 3 0.022199 44.511 By matching By MS/MS By matching By matching By matching By matching 1 1 4057700 0 2260500 1797200 0 0 0 866 952 883 4019;4020 2783 2783 1 AVDIPHMDIEALKK QQHCDEAKAVDIPHMD MDIEALKKLNKNKKLV K A V K K L 2 0 0 2 0 0 1 0 1 2 1 2 1 0 1 0 0 0 0 1 0 14 1 1578.844 P62906 P62906 79 92 RPL10A 60S ribosomal protein L10a yes yes 3 0.0028314 55.899 By matching By MS/MS By matching By matching By matching By matching 1 10694000 0 10694000 0 0 0 0 867 997 884 4021 2784 2784 1 AVDQPRQLFWEK KVKSDPQKAVDQPRQL PRQLFWEKKLSGLNAF K A V E K K 1 1 0 1 0 2 1 0 0 0 1 1 0 1 1 0 0 1 0 1 0 12 1 1515.7834 O95983;O95983-2 O95983 130 141 MBD3 Methyl-CpG-binding domain protein 3 yes no 3 0.003957 67.214 By matching By MS/MS By matching By matching By matching By matching 1 12384000 0 12384000 0 0 0 0 868 776 885 4022 2785 2785 1 AVDSQILPK EQRKIDQKAVDSQILP VDSQILPKIKAIPQLQ K A V P K I 1 0 0 1 0 1 0 0 0 1 1 1 0 0 1 1 0 0 0 1 0 9 0 969.5495 F8W181;Q02878 F8W181 192 200 RPL6 60S ribosomal protein L6 yes no 2 0.026468 66.27 By matching By matching By matching By matching By matching By MS/MS 1 1 2795700 0 0 0 0 783680 2012000 869 551 886 4023;4024 2786 2786 1 AVEEDGHLKCPR KRKQETQRAVEEDGHL DGHLKCPRSAKPQDAV R A V P R S 1 1 0 1 1 0 2 1 1 0 1 1 0 0 1 0 0 0 0 1 0 12 1 1409.6721 Q9P275;Q9P275-2;E9PEW0 Q9P275 966 977 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 3 0.016041 54.259 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 6707200 616760 964770 583260 401480 1651300 2489600 870 1576 887 4025;4026;4027;4028;4029;4030 2787;2788;2789 2789 3 AVEEQIEYLQK EDALRKIRAVEEQIEY EQIEYLQKKLAMAKQE R A V Q K K 1 0 0 0 0 2 3 0 0 1 1 1 0 0 0 0 0 0 1 1 0 11 0 1348.6874 Q5VTR2 Q5VTR2 706 716 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 2 0.0048417 74.962 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 3162200 0 1316200 0 0 0 1846000 871 1204 888 4031;4032 2790;2791 2790 2 AVEIVTSTSAAK KRDADASKAVEIVTST VTSTSAAKTGQAKASV K A V A K T 3 0 0 0 0 0 1 0 0 1 0 1 0 0 0 2 2 0 0 2 0 12 0 1175.6398 Q14966-3;Q14966;Q14966-4 Q14966-3 783 794 ZNF638 Zinc finger protein 638 yes no 2 0.00069736 93.623 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 1 1 41985000 9667900 6052700 6393900 3979800 7714900 8176300 872 1118 889 4033;4034;4035;4036;4037;4038;4039;4040 2792;2793;2794;2795;2796 2796 5 AVELASLQNAK NLLTLAQKAVELASLQ LASLQNAKDGSGSEEK K A V A K D 3 0 1 0 0 1 1 0 0 0 2 1 0 0 0 1 0 0 0 1 0 11 0 1142.6295 Q6PJG2;F6RU81;H7C1L3 Q6PJG2 473 483 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 2 1.2459E-12 113.67 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 45421000 4776000 5774000 4868500 4016100 13575000 12411000 873 1231 890 4041;4042;4043;4044;4045;4046;4047 2797;2798;2799;2800;2801;2802 2799 6 AVELEHETFR DEADLRAKAVELEHET ELEHETFRNAKVANLY K A V F R N 1 1 0 0 0 0 3 0 1 0 1 0 0 1 0 0 1 0 0 1 0 10 0 1229.6041 O94762;B7Z8Y7 O94762 580 589 RECQL5 ATP-dependent DNA helicase Q5 yes no 3 0.011256 69.275 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 5770300 543770 1346000 0 367750 1160000 2352800 874 197 891 4048;4049;4050;4051;4052 2803;2804;2805 2805 3 AVELEHETFRNAK DEADLRAKAVELEHET HETFRNAKVANLYKAS K A V A K V 2 1 1 0 0 0 3 0 1 0 1 1 0 1 0 0 1 0 0 1 0 13 1 1542.7791 O94762;B7Z8Y7 O94762 580 592 RECQL5 ATP-dependent DNA helicase Q5 yes no 3 0.002275 71.085 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 19331000 1870600 3444000 4790800 2157600 3177200 3891300 875 197 892 4053;4054;4055;4056;4057;4058 2806;2807;2808;2809;2810;2811 2809 6 AVEQIRNILK NTMENVKKAVEQIRNI EQIRNILKQGIETPED K A V L K Q 1 1 1 0 0 1 1 0 0 2 1 1 0 0 0 0 0 0 0 1 0 10 1 1182.7085 Q15637-6;Q15637-4;Q15637-3;Q15637-2;Q15637 Q15637-6 218 227 SF1 Splicing factor 1 no no 2 1.6149E-34 134.57 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 33022000 7763000 8684600 0 0 16575000 0 876 1141 893 4059;4060;4061 2812;2813 2813 2 AVESRVTQEEIK ________________ RVTQEEIKKEPEKPID M A V I K K 1 1 0 0 0 1 3 0 0 1 0 1 0 0 0 1 1 0 0 2 0 12 1 1387.7307 O00422 O00422 2 13 SAP18 Histone deacetylase complex subunit SAP18 yes yes 2 0.0008228 93.766 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 30761000 0 0 8061100 4227900 9038500 9433100 877 691 894 4062;4063;4064;4065 2814;2815;2816;2817 2814 4 AVFPSIVGRPR FAGDDAPRAVFPSIVG PSIVGRPRHQGVMVGM R A V P R H 1 2 0 0 0 0 0 1 0 1 0 0 0 1 2 1 0 0 0 2 0 11 1 1197.6982 F5H0N0;B4E335;P63261;P60709;I3L3I4;G5E9R0;I3L3R2;E7EVS6;I3L3I0;I3L1U9;E7EQV5;Q5T8M8;A6NL76;B4DW52;P68133;P68032;Q5T8M7;F5H1C1;P63267;P62736;C9JUM1;C9JZR7;C9JTX5;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;I3L4N8;E9PG30;Q6S8J3;P0CG38;A5A3E0;F8WCH0;Q9BYX7 F5H0N0 29 39 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2;POTEE;POTEI;POTEF;POTEKP Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;POTE ankyrin domain family member E;POTE ankyrin domain family member I;POTE ankyrin domain family member F;Putative beta-actin-like protein 3 yes no 3 3.2564E-42 135.55 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 56819000 17615000 3392600 11629000 2023900 8459100 13700000 878 164 895 4066;4067;4068;4069;4070;4071 2818;2819;2820;2821;2822;2823;2824;2825 2824 8 AVGASFPLYEPAKMKTPVQYSQQQNSPQK ESVQTPSKAVGASFPL QQQNSPQKHKNKDLYT K A V Q K H 3 0 1 0 0 5 1 1 0 0 1 3 1 1 4 3 1 0 2 2 0 29 2 3221.6179 P46013;F5H4V4 P46013 332 360 MKI67 Antigen KI-67 yes no 4 1.2187E-19 74.287 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 2 1 87776000 0 5905600 30931000 20617000 0 30322000 879 919 896;897 4072;4073;4074;4075;4076 2826;2827;2828;2829;2830;2831 2827 104 6 AVGKDNFTLIPEGTNGTEER CTFNTAQKAVGKDNFT GTNGTEERMSVIWDKA K A V E R M 1 1 2 1 0 0 3 3 0 1 1 1 0 1 1 0 3 0 0 1 0 20 1 2147.0495 B4DR31;Q16555 B4DR31 306 325 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 3 6.3315E-11 91.547 By matching By MS/MS By matching By matching By matching By matching 1 1 11878000 0 7215100 0 4662800 0 0 880 118 898 4077;4078 2832 2832 1 AVGSPLCVPAR MTPKTMPRAVGSPLCV SPLCVPARRRSSEPRK R A V A R R 2 1 0 0 1 0 0 1 0 0 1 0 0 0 2 1 0 0 0 2 0 11 0 1125.5965 Q9NYZ3 Q9NYZ3 533 543 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 0.012301 62.166 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4766400 476280 900410 246490 0 0 3143300 881 1564 899 4079;4080;4081;4082 2833;2834 2833 2 AVHGVEETSSEVKPPNE PYPMMHGRAVHGVEET SEVKPPNE________ R A V N E - 1 0 1 0 0 0 4 1 1 0 0 1 0 0 2 2 1 0 0 3 0 17 1 1807.8588 Q7Z6I8 Q7Z6I8 172 188 C5orf24 UPF0461 protein C5orf24 yes yes 3 0.031005 48.623 By matching By matching By matching By matching By matching By MS/MS 2 1 2 3 7937100 1849200 1238500 0 0 1101100 3748300 882 1256 900 4083;4084;4085;4086;4087;4088;4089;4090 2835;2836;2837 2835 1 AVICAGLYPK SDNEKIIKAVICAGLY ICAGLYPKVAKIRLNL K A V P K V 2 0 0 0 1 0 0 1 0 1 1 1 0 0 1 0 0 0 1 1 0 10 0 1090.5845 Q9H2U1-3;Q9H2U1-2;F5GZS0;Q9H2U1;E7EWK3 Q9H2U1-3 804 813 DHX36 Probable ATP-dependent RNA helicase DHX36 yes no 2 0.0059401 86.136 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 19619000 4154300 2064000 5642200 1288100 1079200 5391400 883 502 901 4091;4092;4093;4094;4095;4096 2838;2839;2840;2841;2842 2842 5 AVKEEGQDPDEIGIELEATSK VLMERLKKAVKEEGQD IELEATSKKSAKRCVK K A V S K K 2 0 0 2 0 1 5 2 0 2 1 2 0 0 1 1 1 0 0 1 0 21 1 2257.0962 Q14151;A8MXT5;C9JPX0;B4DU53;F5GXS4 Q14151 63 83 SAFB2 Scaffold attachment factor B2 yes no 3 6.9046E-59 114.87 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 24015000 19882000 0 0 4132700 0 0 884 1097 902 4097;4098 2843;2844 2844 2 AVKEEGQDPDEIGIELEATSKK VLMERLKKAVKEEGQD ELEATSKKSAKRCVKG K A V K K S 2 0 0 2 0 1 5 2 0 2 1 3 0 0 1 1 1 0 0 1 0 22 2 2385.1911 Q14151;A8MXT5;C9JPX0;B4DU53;F5GXS4 Q14151 63 84 SAFB2 Scaffold attachment factor B2 yes no 3 3.271E-91 126.26 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 24404000 5926400 622630 4273800 1024400 7552900 5003900 885 1097 903 4099;4100;4101;4102;4103;4104 2845;2846;2847 2847 3 AVKEEQVQQLR A V L R 1 1 0 0 0 3 2 0 0 0 1 1 0 0 0 0 0 0 0 2 0 11 1 1326.7256 REV__Q14980-2 yes no 3 0.0062402 70.552 By matching By matching By matching By matching By matching By MS/MS 1 1 2 44047000 0 0 0 5873900 215280 37958000 + 886 1678 904 4105;4106;4107;4108 2848 2848 1 AVLAAASPYFHDK GRELRAHKAVLAAASP ASPYFHDKLLLGDAPR K A V D K L 4 0 0 1 0 0 0 0 1 0 1 1 0 1 1 1 0 0 1 1 0 13 0 1388.7089 Q96C00 Q96C00 64 76 ZBTB9 Zinc finger and BTB domain-containing protein 9 yes yes 2;3 4.4197E-35 123.95 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 2 1 2 58592000 23362000 4107800 8796800 5350200 3255000 13720000 887 1373 905 4109;4110;4111;4112;4113;4114;4115;4116;4117 2849;2850;2851;2852;2853;2854;2855 2855 7 AVLFCLSEDK EEVKKRKKAVLFCLSE LFCLSEDKKNIILEEG K A V D K K 1 0 0 1 1 0 1 0 0 0 2 1 0 1 0 1 0 0 0 1 0 10 0 1180.5798 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 35 44 CFL1 Cofilin-1 yes no 2 3.0574E-77 151.83 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 53775000 0 40675000 0 13101000 0 0 888 461 906 4118;4119 2856;2857;2858 2856 3 AVLFCLSEDKK EEVKKRKKAVLFCLSE FCLSEDKKNIILEEGK K A V K K N 1 0 0 1 1 0 1 0 0 0 2 2 0 1 0 1 0 0 0 1 0 11 1 1308.6748 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 35 45 CFL1 Cofilin-1 yes no 3 0.002254 77.288 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 9053300 0 5410700 0 0 0 3642600 889 461 907 4120;4121 2859;2860 2859 2 AVLIAGQPGTGK REGKIAGRAVLIAGQP AGQPGTGKTAIAMGMA R A V G K T 2 0 0 0 0 1 0 3 0 1 1 1 0 0 1 0 1 0 0 1 0 12 0 1110.6397 Q9Y230;B3KQ59 Q9Y230 72 83 RUVBL2 RuvB-like 2 yes no 2 0.020831 51.612 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 17967000 1675200 1315600 1095700 1465800 5751200 6663200 890 1627 908 4122;4123;4124;4125;4126;4127 2861;2862;2863;2864 2861 4 AVLLAGPPGTGK KSKKMAGRAVLLAGPP AGPPGTGKTALALAIA R A V G K T 2 0 0 0 0 0 0 3 0 0 2 1 0 0 2 0 1 0 0 1 0 12 0 1079.6339 Q9Y265;Q9Y265-2;E7ETR0 Q9Y265 65 76 RUVBL1 RuvB-like 1 yes no 2 0.0040203 66.326 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 22674000 2791500 2413800 2622700 2513600 466150 11867000 891 1629 909 4128;4129;4130;4131;4132;4133 2865;2866;2867 2866 3 AVLLETTLGDVVIDLYTEERPR ________________ LYTEERPRACLNFLKL M A V P R A 1 2 0 2 0 0 3 1 0 1 4 0 0 0 1 0 3 0 1 3 0 22 1 2501.3377 Q8WUA2 Q8WUA2 2 23 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 2;3 1.0842E-133 142.58 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 2 1 1 1 185720000 133750000 27279000 6090100 0 18605000 0 892 1339 910 4134;4135;4136;4137;4138 2868;2869;2870;2871;2872;2873;2874 2871 6 AVLLGPPGAGK PEYPKGIRAVLLGPPG LGPPGAGKGTQAPRLA R A V G K G 2 0 0 0 0 0 0 3 0 0 2 1 0 0 2 0 0 0 0 1 0 11 0 978.58622 G3V213;F8VZG5;P54819-3;E7EWH4;P54819-5;P54819-2;F8W1A4;P54819;F8VPP1;F8VY04 G3V213 18 28 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes no 2 0.01513 59.067 By matching By matching By matching By matching By MS/MS By matching 1 1 946980 0 0 227280 0 719700 0 893 393 911 4139;4140 2875 2875 1 AVLQSMSGRENATNGVQQLSK SLKLGLDKAVLQSMSG NGVQQLSKKEIEDLLR K A V S K K 2 1 2 0 0 3 1 2 0 0 2 1 1 0 0 3 1 0 0 2 0 21 1 2217.1172 Q9P2D1 Q9P2D1 1437 1457 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 3 0.0019774 50.404 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 9038500 0 1513300 1887600 0 2120700 3516900 894 1578 912 4141;4142;4143;4144 2876;2877;2878 2878 3 AVLSTDVQNTPVNLQTSSK VTAINSQKAVLSTDVQ VNLQTSSKVTGPGAEA K A V S K V 1 0 2 1 0 2 0 0 0 0 2 1 0 0 1 3 3 0 0 3 0 19 0 2001.0378 Q96BD5-2;Q96BD5;Q96BD5-3 Q96BD5-2 167 185 PHF21A PHD finger protein 21A yes no 2 4.3441E-295 176.11 By matching By MS/MS By matching By matching By matching By matching 1 12035000 0 12035000 0 0 0 0 895 1371 913 4145 2879 2879 1 AVLTGTKDTVSTGLTGAVNVAK QGGLDTSKAVLTGTKD TGAVNVAKGTVQAGVD K A V A K G 3 0 1 1 0 0 0 3 0 0 2 2 0 0 0 1 5 0 0 4 0 22 1 2102.1583 Q96Q06-2;Q96Q06 Q96Q06-2 149 170 PLIN4 Perilipin-4 yes no 3 0.021502 34.819 By matching By MS/MS By matching By matching By matching By matching 1 14273000 0 14273000 0 0 0 0 896 1413 914 4146 2880 2880 1 AVLVQFSNGK GAPDGSQRAVLVQFSN LVQFSNGKLQSPGNMR R A V G K L 1 0 1 0 0 1 0 1 0 0 1 1 0 1 0 1 0 0 0 2 0 10 0 1061.5869 Q9GZS1-2;B4DW33 Q9GZS1-2 23 32 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes no 2 0.0027701 97.597 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 9893900 823560 1431800 630340 689060 998860 5320200 897 1475 915 4147;4148;4149;4150;4151;4152 2881;2882;2883;2884 2881 4 AVNAMILAGK NLGKNYEKAVNAMILA NAMILAGKAYYDGVAK K A V G K A 3 0 1 0 0 0 0 1 0 1 1 1 1 0 0 0 0 0 0 1 0 10 0 986.55829 Q9UHR4 Q9UHR4 40 49 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 2 0.0029844 93.598 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 14785000 3008300 1367500 2833300 2437100 889050 4249300 898 1595 916 4153;4154;4155;4156;4157;4158 2885;2886;2887;2888;2889;2890 2886 6 AVPGTEVPGHK GGVDFHMKAVPGTEVP GTEVPGHKNWVVSKFG K A V H K N 1 0 0 0 0 0 1 2 1 0 0 1 0 0 2 0 1 0 0 2 0 11 0 1090.5771 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;Q76FK4-3;F5GWN9;F5H540;F5H797;F5H8B8;F5H692 F5H101 129 139 NOL8 Nucleolar protein 8 yes no 2 0.0067259 69.65 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 7268200 1140900 904820 2210800 0 1427500 1584200 899 27 917 4159;4160;4161;4162;4163;4164 2891;2892;2893;2894;2895 2891 5 AVPLTVAK NKVYLSGKAVPLTVAK AVPLTVAKSQFSRSSK K A V A K S 2 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 1 0 0 2 0 8 0 797.50109 Q96GM8;B4DEM6 Q96GM8 482 489 TOE1 Target of EGR1 protein 1 yes no 1 0.0061027 72.789 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 4904400 0 0 2929600 840810 1134000 0 900 1389 918 4165;4166;4167 2896;2897 2896 2 AVPYPQR KVLPVPQKAVPYPQRD KAVPYPQRDMPIQAFL K A V Q R D 1 1 0 0 0 1 0 0 0 0 0 0 0 0 2 0 0 0 1 1 0 7 0 829.44464 CON__P02666 CON__P02666 177 183 yes yes 2 0.040612 77.374 By matching By matching By matching By matching By matching By MS/MS 1 1 1 15753000 0 0 8975400 2055100 0 4722000 + 901 290 919 4168;4169;4170 2898 2898 1 AVQDLCGWR RESTMYPKAVQDLCGW VQDLCGWRIRSLACGK K A V W R I 1 1 0 1 1 1 0 1 0 0 1 0 0 0 0 0 0 1 0 1 0 9 0 1103.5182 Q9P258 Q9P258 423 431 RCC2 Protein RCC2 yes yes 2 0.036278 61.691 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 16783000 1946400 3079600 1317400 1734800 3613400 5091000 902 1575 920 4171;4172;4173;4174;4175;4176 2899 2899 1 AVQDLCGWRIR RESTMYPKAVQDLCGW DLCGWRIRSLACGKSS K A V I R S 1 2 0 1 1 1 0 1 0 1 1 0 0 0 0 0 0 1 0 1 0 11 1 1372.7034 Q9P258 Q9P258 423 433 RCC2 Protein RCC2 yes yes 3 0.0033 83.647 By matching By matching By matching By MS/MS By matching By matching 1 1 12818000 0 4759200 0 8059300 0 0 903 1575 921 4177;4178 2900 2900 1 AVQEIMQEK KSKEEACKAVQEIMQE VQEIMQEKAFGAAGET K A V E K A 1 0 0 0 0 2 2 0 0 1 0 1 1 0 0 0 0 0 0 1 0 9 0 1074.5379 C9JBJ1;C9JTV6;F8WD69;P22102-2;P22102;H7C366 C9JBJ1 170 178 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 2 0.015314 76.1 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 8650800 886180 2206600 0 699640 0 4858400 904 239 922 4179;4180;4181;4182 2901;2902;2903 2901 3 AVQGSGDTSRHCLPTLADAK GRGSAFLKAVQGSGDT LPTLADAKGLQDTGGT K A V A K G 3 1 0 2 1 1 0 2 1 0 2 1 0 0 1 2 2 0 0 1 0 20 1 2083.0117 Q96RL1;F8VQY2;Q96RL1-3;F2Z2T8 Q96RL1 246 265 UIMC1 BRCA1-A complex subunit RAP80 yes no 3;4 0.0067438 43.955 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 2 2 2 13759000 1028300 2229600 2255200 0 1963300 6282200 905 535 923 4183;4184;4185;4186;4187;4188;4189;4190 2904;2905;2906 2905 3 AVRAALGVLGPEVEK VLDSLLSRAVRAALGV VLGPEVEKEAVSPRSE R A V E K E 3 1 0 0 0 0 2 2 0 0 2 1 0 0 1 0 0 0 0 3 0 15 1 1507.8722 O95382-3;O95382 O95382-3 1103 1117 MAP3K6 Mitogen-activated protein kinase kinase kinase 6 yes no 3 0.002474 59.75 By matching By matching By matching By MS/MS By matching By matching 1 1 64554000 0 51794000 0 12760000 0 0 906 771 924 4191;4192 2907 2907 1 AVSDWIDEQEK SHTERALKAVSDWIDE DWIDEQEKGSSEQAES K A V E K G 1 0 0 2 0 1 2 0 0 1 0 1 0 0 0 1 0 1 0 1 0 11 0 1318.6041 Q12906-5;Q12906-4;Q12906-2;Q12906-6;Q12906-3;C9JFV5;Q12906;G5E9M5;B4DFG4 Q12906-5 44 54 ILF3 Interleukin enhancer-binding factor 3 yes no 2 0.00076431 94.363 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 5449300 0 3150600 0 0 0 2298700 907 243 925 4193;4194 2908;2909;2910 2909 3 AVSEEQQPALKGK PEKNRINKAVSEEQQP QQPALKGKKGKEEKSK K A V G K K 2 0 0 0 0 2 2 1 0 0 1 2 0 0 1 1 0 0 0 1 0 13 1 1383.7358 E9PC67;F8VQZ0;Q5STZ8;F5GYK6;Q8NE71;Q8NE71-2 Q8NE71 164 176 ABCF1 ATP-binding cassette sub-family F member 1 no no 2;3 1.6874E-24 117.86 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 2 2 2 73837000 8476700 9982500 12867000 9254400 14596000 18660000 908 1321;411 926 4195;4196;4197;4198;4199;4200;4201;4202;4203;4204;4205 2911;2912;2913;2914;2915;2916;2917 2915 7 AVSGASAGDYSDAIETLLTAIAVIK ISSSAISKAVSGASAG LTAIAVIKQSRVANDE K A V I K Q 6 0 0 2 0 0 1 2 0 3 2 1 0 0 0 3 2 0 1 2 0 25 0 2435.2795 F5GWE6;F5H669;Q8N684-2;Q8N684;Q8N684-3 F5GWE6 121 145 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 yes no 2;3 4.6604E-163 141.7 By matching By MS/MS By MS/MS By matching By matching By matching 2 2 1 72789000 0 22762000 45201000 4826400 0 0 909 484 927 4206;4207;4208;4209;4210 2918;2919;2920;2921 2918 4 AVSISTEPPTYLREQK DGNDEKYKAVSISTEP PTYLREQKAKRNSQWV K A V Q K A 1 1 0 0 0 1 2 0 0 1 1 1 0 0 2 2 2 0 1 1 0 16 1 1817.9523 Q12824-2;Q12824;G5E975;C9JTA6 Q12824-2 100 115 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes no 3 0.01504 42.682 By matching By matching By matching By matching By matching By MS/MS 1 1 5197100 0 1134800 0 0 0 4062300 910 592 928 4211;4212 2922 2922 1 AVSQSRNEMGIPQQTTSPENAGPQNTK GTPKSVNKAVSQSRNE NAGPQNTKSEHVKKTL K A V T K S 2 1 3 0 0 4 2 2 0 1 0 1 1 0 3 3 3 0 0 1 0 27 1 2869.3624 A8MTM6;Q15398;Q15398-1 A8MTM6 646 672 DLGAP5 Disks large-associated protein 5 yes no 3 0.0015083 40.208 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 23964000 0 4457600 6091400 4549400 3752100 5113300 911 42 929 4213;4214;4215;4216;4217 2923;2924;2925 2923 3 AVSTVVVTTAPSPK GTASGSSKAVSTVVVT VTTAPSPKQAPEQQ__ K A V P K Q 2 0 0 0 0 0 0 0 0 0 0 1 0 0 2 2 3 0 0 4 0 14 0 1355.766 Q6P4R8-3;Q6P4R8;Q6P4R8-2 Q6P4R8-3 1279 1292 NFRKB Nuclear factor related to kappa-B-binding protein yes no 2 0.0018066 67.095 By MS/MS By matching By matching By matching By matching By matching 1 839520 839520 0 0 0 0 0 912 1225 930 4218 2926;2927 2927 2 AVSVTPIRDTK ________________ VTPIRDTKWLTLEVCR M A V T K W 1 1 0 1 0 0 0 0 0 1 0 1 0 0 1 1 2 0 0 2 0 11 1 1185.6717 Q9NR56-3;Q9NR56-4;E9PBW7;Q9NR56-6;C9JP00;Q9NR56-2;Q9NR56-5;Q9NR56 Q9NR56-3 2 12 MBNL1 Muscleblind-like protein 1 yes no 2 2.8681E-128 166.29 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 46791000 5912300 7271400 5500000 3716100 10458000 13934000 913 263 931 4219;4220;4221;4222;4223;4224 2928;2929;2930;2931;2932;2933 2930 6 AVTAIMTR QLVSLVQKAVTAIMTR AVTAIMTRLHNLAQFE K A V T R L 2 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 2 0 0 1 0 8 0 861.47422 H0Y4W2;Q9Y4A5-2;F2Z2U4;Q9Y4A5 H0Y4W2 3543 3550 TRRAP Transformation/transcription domain-associated protein yes no 2 0.034579 69.812 By matching By matching By matching By matching By matching By MS/MS 1 1 1533900 0 0 0 0 452030 1081800 914 476 932 4225;4226 2934 2934 1 AVTEQGAELSNEER DDMATCMKAVTEQGAE AELSNEERNLLSVAYK K A V E R N 2 1 1 0 0 1 4 1 0 0 1 0 0 0 0 1 1 0 0 1 0 14 0 1531.7114 P27348;E9PG15 P27348 28 41 YWHAQ 14-3-3 protein theta yes no 2 0.0011059 76.01 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 3668100 0 713300 0 197590 1433200 1324000 915 883 933 4227;4228;4229;4230 2935;2936 2936 2 AVTEVLAR KKVDVTSKAVTEVLAR AVTEVLARTIEYLQPN K A V A R T 2 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 2 0 8 0 857.49707 Q99961;E7EVZ4 Q99961 46 53 SH3GL1 Endophilin-A2 yes no 2 0.028888 71.877 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 5681000 622700 883190 1037000 685020 908790 1544200 916 1435 934 4231;4232;4233;4234;4235;4236 2937 2937 1 AVTIANSPSKPSEK AKMEHGPKAVTIANSP SPSKPSEKDSVVSLES K A V E K D 2 0 1 0 0 0 1 0 0 1 0 2 0 0 2 3 1 0 0 1 0 14 1 1427.762 Q8NEF9 Q8NEF9 197 210 SRFBP1 Serum response factor-binding protein 1 yes yes 2;3 1.2736E-12 102.33 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 3 10458000 1159000 1423100 1385800 1179000 2585400 2725900 917 1322 935 4237;4238;4239;4240;4241;4242;4243;4244;4245;4246;4247;4248;4249 2938;2939;2940;2941;2942;2943;2944;2945;2946 2939 9 AVVGVVAGGGRIDKPILK KVISSANRAVVGVVAG RIDKPILKAGRAYHKY R A V L K A 2 1 0 1 0 0 0 4 0 2 1 2 0 0 1 0 0 0 0 4 0 18 2 1748.0672 E9PKZ0;P62917;E9PIZ3;E9PKU4;E9PP36 E9PKZ0 164 181 RPL8 60S ribosomal protein L8 yes no 3;4 0.0015183 72.315 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 2 1 34616000 8973300 1062000 2848000 1386300 17574000 2771900 918 456 936 4250;4251;4252;4253;4254;4255;4256 2947;2948;2949;2950;2951 2951 4 AVVVCPKDEDYKQR LFAGFQRKAVVVCPKD KDEDYKQRTQKKAEVE K A V Q R T 1 1 0 2 1 1 1 0 0 0 0 2 0 0 1 0 0 0 1 3 0 14 2 1705.8458 Q00839;B3KX72;Q00839-2 Q00839 603 616 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 3;4 0.00072164 86.288 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 2 1 2 1 2 30683000 6377800 6133400 2724500 3005500 2160200 10282000 919 1022;1023 937 4257;4258;4259;4260;4261;4262;4263;4264;4265;4266;4267 2952;2953;2954;2955;2956;2957;2958;2959;2960 2954 9 AVVVPARSEALGK KKETTVKKAVVVPARS ARSEALGKEAACESST K A V G K E 3 1 0 0 0 0 1 1 0 0 1 1 0 0 1 1 0 0 0 3 0 13 1 1295.7561 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 482 494 DIDO1 Death-inducer obliterator 1 yes no 3 0.0020889 72.289 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 8505100 2337200 0 1924000 1235700 3008200 0 920 1447 938 4268;4269;4270;4271 2961;2962 2962 2 AVYQARPQLHK PYLCPQCRAVYQARPQ QARPQLHKNTVLCNVV R A V H K N 2 1 0 0 0 2 0 0 1 0 1 1 0 0 1 0 0 0 1 1 0 11 1 1309.7255 Q14258 Q14258 55 65 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 3 0.021508 55.084 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 10786000 1009300 2070100 1529000 1582500 106880 4488600 921 1105 939 4272;4273;4274;4275;4276;4277 2963;2964 2964 2 AWEDYYK SSQPNYSKAWEDYYKK KAWEDYYKKQSHAASA K A W Y K K 1 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 1 2 0 0 7 0 973.41815 Q96I24 Q96I24 519 525 FUBP3 Far upstream element-binding protein 3 yes yes 2 0.015859 89.369 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 5146300 0 763270 1147500 625820 295540 2314200 922 1394 940 4278;4279;4280;4281;4282 2965 2965 1 AWEDYYKK SSQPNYSKAWEDYYKK AWEDYYKKQSHAASAA K A W K K Q 1 0 0 1 0 0 1 0 0 0 0 2 0 0 0 0 0 1 2 0 0 8 1 1101.5131 Q96I24 Q96I24 519 526 FUBP3 Far upstream element-binding protein 3 yes yes 2 0.0002861 115.49 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 21894000 2272100 2994000 3422100 1928100 3236600 8040800 923 1394 941 4283;4284;4285;4286;4287;4288 2966 2966 1 AWEEYYK TGQSDYTKAWEEYYKK KAWEEYYKKIGQQPQQ K A W Y K K 1 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 1 2 0 0 7 0 987.4338 Q92945-2;Q92945 Q92945-2 621 627 KHSRP Far upstream element-binding protein 2 no no 1;2 4.6188E-90 162.51 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 1 2 1 463830000 35391000 62756000 72094000 41600000 92441000 159540000 924 1366 942 4289;4290;4291;4292;4293;4294;4295;4296;4297;4298;4299 2967;2968;2969;2970;2971;2972;2973 2967 7 AWEEYYKK TGQSDYTKAWEEYYKK AWEEYYKKIGQQPQQP K A W K K I 1 0 0 0 0 0 2 0 0 0 0 2 0 0 0 0 0 1 2 0 0 8 1 1115.5288 Q92945-2;Q92945 Q92945-2 621 628 KHSRP Far upstream element-binding protein 2 no no 2 3.4246E-117 170.3 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 640530000 45865000 62434000 128530000 67808000 179850000 156050000 925 1366 943 4300;4301;4302;4303;4304;4305 2974;2975;2976;2977;2978 2975 5 AWEEYYKKIGQQPQQPGAPPQQDYTK TGQSDYTKAWEEYYKK PPQQDYTKAWEEYYKK K A W T K A 2 0 0 1 0 6 2 2 0 1 0 3 0 0 4 0 1 1 3 0 0 26 2 3077.4883 Q92945-2;Q92945 Q92945-2 621 646 KHSRP Far upstream element-binding protein 2 yes no 4 0.005089 37.034 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 10341000 6932500 0 0 3408800 0 0 926 1366 944 4306;4307 2979;2980 2979 2 AWLVSSGCPLQVKK REYIDHLKAWLVSSGC GCPLQVKKAEPEPMRE K A W K K A 1 0 0 0 1 1 0 1 0 0 2 2 0 0 1 2 0 1 0 2 0 14 1 1571.8494 Q8IX01-4;Q8IX01-3;Q8IX01;E7ETX7 Q8IX01-4 533 546 SUGP2 SURP and G-patch domain-containing protein 2 yes no 3 0.0023013 83.137 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 927 1284 945 4308 2981 2981 1 AWNNQVCCK SGRDGYRKAWNNQVCC WNNQVCCKDLWYLETE K A W C K D 1 0 2 0 2 1 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 9 0 1178.4961 A6NEM2;P51610-2;P51610;P51610-3 A6NEM2 346 354 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2 0.010208 101.54 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 10438000 811770 2546900 2519900 537670 1248800 2773200 928 18 946 4309;4310;4311;4312;4313;4314 2982;2983;2984;2985;2986 2983 5 AWQGAMDAGAASR RLEEHQARAWQGAMDA MDAGAASREHARWQGG R A W S R E 5 1 0 1 0 1 0 2 0 0 0 0 1 0 0 1 0 1 0 0 0 13 0 1290.5775 Q14151 Q14151 861 873 SAFB2 Scaffold attachment factor B2 yes yes 2 0.00079741 89.507 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 20095000 635740 2437300 1696600 1222400 4767300 9335600 929 1097 947 4315;4316;4317;4318;4319;4320 2987;2988;2989;2990;2991 2990 4 AWSVARLSQKFPK KFGERALKAWSVARLS RLSQKFPKAEFVEVTK K A W P K A 2 1 0 0 0 1 0 0 0 0 1 2 0 1 1 2 0 1 0 1 0 13 2 1516.8514 CON__P02769 CON__P02769 236 248 yes yes 3 1.089E-08 103.43 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 417280000 0 35300000 105410000 86120000 12741000 177720000 + 930 294 948 4321;4322;4323;4324;4325;4326;4327 2992;2993;2994;2995;2996;2997 2992 6 AYAALAALEK GSNKKVAKAYAALAAL AALAALEKLFPDTPLA K A Y E K L 5 0 0 0 0 0 1 0 0 0 2 1 0 0 0 0 0 0 1 0 0 10 0 1019.5651 Q12906-5;Q12906-4;Q12906-2;Q12906-6;Q12906-3;C9JFV5;Q12906;G5E9M5;B4DFG4 Q12906-5 578 587 ILF3 Interleukin enhancer-binding factor 3 yes no 2 0.0007944 105.4 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 51053000 0 14930000 8279500 6096200 0 21747000 931 243 949 4328;4329;4330;4331 2998;2999;3000;3001 3001 4 AYADSYYYEDGGMKPR FPEFPATRAYADSYYY EDGGMKPRVMKEAVST R A Y P R V 2 1 0 2 0 0 1 2 0 0 0 1 1 0 1 1 0 0 4 0 0 16 1 1884.7989 Q8IVM0 Q8IVM0 139 154 CCDC50 Coiled-coil domain-containing protein 50 yes yes 3 0.029586 56.527 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 3429100 0 556110 835160 0 0 2037800 932 1277 950 4332;4333;4334 3002;3003 3003 1 AYCEGCYVATLEK HFYAVERRAYCEGCYV CYVATLEKCATCSQPI R A Y E K C 2 0 0 0 2 0 2 1 0 0 1 1 0 0 0 0 1 0 2 1 0 13 0 1562.6745 Q15654 Q15654 326 338 TRIP6 Thyroid receptor-interacting protein 6 yes yes 2 1.1319E-59 131.06 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 25027000 8065000 2353400 8185800 0 2794000 3628800 933 1145 951 4335;4336;4337;4338;4339 3004;3005;3006;3007 3004 4 AYCVLVTGPNMGGK EEEQENGKAYCVLVTG TGPNMGGKSTLMRQAG K A Y G K S 1 0 1 0 1 0 0 3 0 0 1 1 1 0 1 0 1 0 1 2 0 14 0 1465.7058 P52701;B4DF41;F5H2F9 P52701 1127 1140 MSH6 DNA mismatch repair protein Msh6 yes no 2 0.0017836 70.438 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 22692000 13715000 0 8977500 0 0 0 934 959 952 4340;4341;4342 3008;3009;3010 3010 3 AYDIAGSTKDVK IVALMVRRAYDIAGST AGSTKDVKVFLNGNKL R A Y V K V 2 0 0 2 0 0 0 1 0 1 0 2 0 0 0 1 1 0 1 1 0 12 1 1266.6456 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5 P11388 243 254 TOP2A DNA topoisomerase 2-alpha yes no 2 0.022995 60.08 By matching By matching By matching By matching By matching By MS/MS 1 670920 0 0 0 0 0 670920 935 655 953 4343 3011 3011 1 AYDLAGSCRGVK IVALMTRRAYDLAGSC AGSCRGVKVMFNGKKL R A Y V K V 2 1 0 1 1 0 0 2 0 0 1 1 0 0 0 1 0 0 1 1 0 12 1 1295.6292 Q02880-2;Q02880;E9PCY5 Q02880-2 259 270 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 2;3 0.001292 91.701 By matching By MS/MS By matching By MS/MS By matching By MS/MS 2 2 1 2 7675400 0 2062100 2028500 760360 0 2824500 936 1035 954 4344;4345;4346;4347;4348;4349;4350 3012;3013;3014;3015;3016;3017;3018;3019 3017 8 AYEMLSDPVK DYFTCITKAYEMLSDP EMLSDPVKRRAFNSVD K A Y V K R 1 0 0 1 0 0 1 0 0 0 1 1 1 0 1 1 0 0 1 1 0 10 0 1151.5533 Q99543;Q99543-2;H7C3L7;C9IZ83;F5H621 Q99543 144 153 DNAJC2 DnaJ homolog subfamily C member 2 yes no 2 0.019099 64.374 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 1 2445800 0 902790 0 325920 0 1217100 937 1426 955 4351;4352;4353;4354 3020;3021 3021 2 AYERNELFLPGR YRMLFKSKAYERNELF NELFLPGRMAYVVDLD K A Y G R M 1 2 1 0 0 0 2 1 0 0 2 0 0 1 1 0 0 0 1 0 0 12 1 1463.7521 Q13123;Q9H4P6;E7EQZ7 Q13123 225 236 IK Protein Red yes no 3 0.0021825 75.819 By matching By MS/MS By matching By matching By matching By matching 1 1 2247600 0 590080 0 0 0 1657500 938 1071 956 4355;4356 3022 3022 1 AYEVLKDEDLR GDFLKINRAYEVLKDE VLKDEDLRKKYDKYGE R A Y L R K 1 1 0 2 0 0 2 0 0 0 2 1 0 0 0 0 0 0 1 1 0 11 1 1349.6827 Q8IXB1;Q8IXB1-2;F8W884;Q3B7W8;E7EP04;Q71S60 Q8IXB1 83 93 DNAJC10 DnaJ homolog subfamily C member 10 yes no 3 0.023823 53.567 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 7670300 581670 1509000 1570700 0 0 4008900 939 1287 957 4357;4358;4359;4360 3023 3023 1 AYEVLKDEDLRK GDFLKINRAYEVLKDE LKDEDLRKKYDKYGEK R A Y R K K 1 1 0 2 0 0 2 0 0 0 2 2 0 0 0 0 0 0 1 1 0 12 2 1477.7777 Q8IXB1;Q8IXB1-2;F8W884;Q3B7W8;E7EP04;Q71S60 Q8IXB1 83 94 DNAJC10 DnaJ homolog subfamily C member 10 yes no 3 0.0056339 80.014 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 10288000 0 0 2184100 2010600 0 6093700 940 1287 958 4361;4362;4363 3024;3025 3025 2 AYFDVKEYDR MDAYTLAKAYFDVKEY FDVKEYDRAAHFLHGC K A Y D R A 1 1 0 2 0 0 1 0 0 0 0 1 0 1 0 0 0 0 2 1 0 10 1 1304.6037 Q9UJX2;Q9UJX2-2 Q9UJX2 92 101 CDC23 Cell division cycle protein 23 homolog yes no 3 0.011065 72.243 By matching By matching By matching By matching By MS/MS By matching 1 1 1 2823600 0 533380 0 0 1177400 1112800 941 1598 959 4364;4365;4366 3026 3026 1 AYGPYTPQPQPK QYPGGMARAYGPYTPQ YTPQPQPKDMVKPPYS R A Y P K D 1 0 0 0 0 2 0 1 0 0 0 1 0 0 4 0 1 0 2 0 0 12 0 1345.6667 Q12948;A3KPE3 Q12948 63 74 FOXC1 Forkhead box protein C1 yes no 2 0.0008989 92.943 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 44349000 6761300 8399900 5308800 3271600 6280600 14327000 942 1065 960 4367;4368;4369;4370;4371;4372;4373 3027;3028;3029;3030;3031;3032 3028 6 AYHLVCLDPELDRAPEGK ILCDTCPRAYHLVCLD LDRAPEGKWSCPHCEK R A Y G K W 2 1 0 2 1 0 2 1 1 0 3 1 0 0 2 0 0 0 1 1 0 18 1 2082.0204 Q12873;E9PG89;Q12873-2;H7C2H0 Q12873 400 417 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 4 0.0018994 54.811 By matching By matching By MS/MS By matching By matching By matching 1 19263000 0 0 19263000 0 0 0 943 430 961 4374 3033 3033 1 AYHMVCLDPDMEKAPEGK ILCDTCPRAYHMVCLD MEKAPEGKWSCPHCEK R A Y G K W 2 0 0 2 1 0 2 1 1 0 1 2 2 0 2 0 0 0 1 1 0 18 1 2089.9271 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 365 382 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3;4 7.735E-14 97.823 By matching By MS/MS By MS/MS By matching By matching By MS/MS 3 3 3 48812000 0 3465700 31069000 0 0 14277000 944 486 962;963 4375;4376;4377;4378;4379;4380;4381;4382;4383 3034;3035;3036;3037;3038;3039 3035 54;55 5 AYHNSPAYLAYINAK IEYNESMKAYHNSPAY YLAYINAKSRAEAALE K A Y A K S 4 0 2 0 0 0 0 0 1 1 1 1 0 0 1 1 0 0 3 0 0 15 0 1694.8417 C0IMW5;B4DFR4;Q969G3-2;B4DGM3;Q969G3 C0IMW5 97 111 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes no 3 8.9849E-06 92.265 By matching By MS/MS By matching By matching By matching By matching 1 15818000 0 15818000 0 0 0 0 945 85 964 4384 3040 3040 1 AYHPHCFTCVMCHR RILRATGKAYHPHCFT FTCVMCHRSLDGIPFT K A Y H R S 1 1 0 0 3 0 0 0 3 0 0 0 1 1 1 0 1 0 1 1 0 14 0 1874.7586 Q93052 Q93052 494 507 LPP Lipoma-preferred partner yes yes 4 0.011336 47.712 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4580600 0 0 720470 449340 0 3410800 946 1367 965 4385;4386;4387 3041 3041 1 AYLAYCTPGSDGQAATLK VSSSDVEKAYLAYCTP DGQAATLKFQAGKHNY K A Y L K F 4 0 0 1 1 1 0 2 0 0 2 1 0 0 1 1 2 0 2 0 0 18 0 1885.888 Q9H0J9 Q9H0J9 411 428 PARP12 Poly [ADP-ribose] polymerase 12 yes yes 2 0.0068361 61.477 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 947 1480 966 4388 3042 3042 1 AYLEEECPATLRK PVYVQRAKAYLEEECP ECPATLRKYLKYSKNI K A Y R K Y 2 1 0 0 1 0 3 0 0 0 2 1 0 0 1 0 1 0 1 0 0 13 1 1578.7712 P25311;C9JEV0 P25311 180 192 AZGP1 Zinc-alpha-2-glycoprotein yes no 2;3 0.0011549 70.089 By matching By matching By MS/MS By matching By matching By matching 1 2 5959200 0 2822900 3136300 0 0 0 948 874 967 4389;4390;4391 3043;3044 3043 2 AYNRFYLLTK YICNECGKAYNRFYLL NRFYLLTKHLKTH___ K A Y T K H 1 1 1 0 0 0 0 0 0 0 2 1 0 1 0 0 1 0 2 0 0 10 1 1287.6976 P58317 P58317 376 385 ZNF121 Zinc finger protein 121 yes yes 3 0.0063436 85.807 By matching By matching By matching By MS/MS By matching By matching 1 9718300 0 0 0 9718300 0 0 949 977 968 4392 3045 3045 1 AYPLADAHLTK TEADVNPKAYPLADAH LADAHLTKKLLDLVQQ K A Y T K K 3 0 0 1 0 0 0 0 1 0 2 1 0 0 1 0 1 0 1 0 0 11 0 1198.6346 P55769;B1AHD1 P55769 10 20 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 2;3 0.0025808 84.31 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 3 2 2 2 2 103720000 24246000 14420000 9649900 8286100 22204000 24918000 950 969 969 4393;4394;4395;4396;4397;4398;4399;4400;4401;4402;4403;4404;4405;4406 3046;3047;3048;3049;3050;3051;3052;3053;3054;3055 3055 10 AYPNKGVGQANKPDETSK PAENTLFKAYPNKGVG NKPDETSKTSILAVSD K A Y S K T 2 0 2 1 0 1 1 2 0 0 0 3 0 0 2 1 1 0 1 1 0 18 2 1902.9436 Q14966-3;Q14966;Q14966-5;F5H6M8;E7EUZ3 Q14966-3 1361 1378 ZNF638 Zinc finger protein 638 yes no 3;4 0.0014835 61.821 By MS/MS By matching By matching By MS/MS By matching By MS/MS 2 2 2 2 2 2 46899000 6120600 8607800 8441000 5191700 8165200 10373000 951 1118 970 4407;4408;4409;4410;4411;4412;4413;4414;4415;4416;4417;4418 3056;3057;3058;3059 3058 4 AYPNNYETMK QCFEKVLKAYPNNYET PNNYETMKILGSLYAA K A Y M K I 1 0 2 0 0 0 1 0 0 0 0 1 1 0 1 0 1 0 2 0 0 10 0 1229.5387 Q6PD62 Q6PD62 370 379 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 2 0.039111 53.597 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 5888600 323630 1003600 2055400 270110 1262700 973220 952 1229 971 4419;4420;4421;4422;4423;4424 3060 3060 1 AYQDRLAYLR WRGYKQKKAYQDRLAY QDRLAYLRSHKDEVVK K A Y L R S 2 2 0 1 0 1 0 0 0 0 2 0 0 0 0 0 0 0 2 0 0 10 1 1267.6673 P46940;H0YLE8 P46940 794 803 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 3 0.032889 56.432 By matching By matching By matching By matching By matching By MS/MS 1 1475100 0 0 0 0 0 1475100 953 929 972 4425 3061 3061 1 AYQKQPTIFQNK MADIQTERAYQKQPTI QPTIFQNKKRVLLGET R A Y N K K 1 0 1 0 0 3 0 0 0 1 0 2 0 1 1 0 1 0 1 0 0 12 1 1464.7725 P62280 P62280 9 20 RPS11 40S ribosomal protein S11 yes yes 3 0.020354 51.998 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 4305700 671900 0 505610 0 1349500 1778600 954 989 973 4426;4427;4428;4429 3062 3062 1 AYQKQPTIFQNKK MADIQTERAYQKQPTI PTIFQNKKRVLLGETG R A Y K K R 1 0 1 0 0 3 0 0 0 1 0 3 0 1 1 0 1 0 1 0 0 13 2 1592.8675 P62280 P62280 9 21 RPS11 40S ribosomal protein S11 yes yes 3 9.4367E-05 96.334 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 29751000 3614300 5122300 3878200 2797500 8513400 5825300 955 989 974 4430;4431;4432;4433;4434;4435 3063;3064;3065;3066 3063 3 AYSLGRAEYGRLGLGEGAEEK VCMDSEGKAYSLGRAE LGEGAEEKSIPTLISR K A Y E K S 3 2 0 0 0 0 4 5 0 0 3 1 0 0 0 1 0 0 2 0 0 21 2 2225.1077 C9JW69;P18754;P18754-2 C9JW69 332 352 RCC1 Regulator of chromosome condensation yes no 3;4 8.3126E-33 105.5 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 2 1 1 84777000 19530000 0 36905000 0 8809300 19533000 956 271 975 4436;4437;4438;4439;4440 3067;3068;3069;3070 3068 4 AYSPTCSPTLGFK VFDAGLQKAYSPTCSP CSPTLGFKEELRPPPT K A Y F K E 1 0 0 0 1 0 0 1 0 0 1 1 0 1 2 2 2 0 1 0 0 13 0 1427.6755 Q5TGY3 Q5TGY3 1397 1409 AHDC1 AT-hook DNA-binding motif-containing protein 1 yes yes 2 0.0030117 64.224 By matching By MS/MS By matching By matching By matching By matching 1 1056100 0 1056100 0 0 0 0 957 1199 976 4441 3071 3071 1 AYTSETYLMK YTCTICSRAYTSETYL TSETYLMKHMRKHNPP R A Y M K H 1 0 0 0 0 0 1 0 0 0 1 1 1 0 0 1 2 0 2 0 0 10 0 1205.5638 Q8TF68-3;F8W6Q3;Q8TF68-2;Q8TF68;Q5T0B9 Q8TF68-3 325 334 ZNF384;ZNF362 Zinc finger protein 384;Zinc finger protein 362 yes no 2 3.5969E-05 109.83 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 36301000 4534600 2539600 3545300 6246800 8892100 10543000 958 555 977 4442;4443;4444;4445;4446;4447 3072;3073;3074 3072 3 AYVTKSPVDAGK EVQVEHIKAYVTKSPV KSPVDAGKAVIVIQDI K A Y G K A 2 0 0 1 0 0 0 1 0 0 0 2 0 0 1 1 1 0 1 2 0 12 1 1234.6558 Q96DG6 Q96DG6 32 43 CMBL Carboxymethylenebutenolidase homolog yes yes 2;3 0.0056117 63.864 By matching By matching By matching By matching By matching By MS/MS 1 2 2545300 0 0 0 0 156670 2388600 959 1377 978 4448;4449;4450 3075;3076 3076 2 CAACQNPRKQSLPATSIPTPASFK QNEGSSTKCAACQNPR IPTPASFKFGTSETSK K C A F K F 4 1 1 0 2 2 0 0 0 1 1 2 0 1 4 3 2 0 0 0 0 24 2 2629.3105 P49792 P49792 1499 1522 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 3 0.0069627 50.189 By MS/MS By matching By matching By matching By matching By matching 1 2589900 2589900 0 0 0 0 0 960 945 979 4451 3077 3077 1 CAADVKAPLEVAQEH SKKPTPDKCAADVKAP PLEVAQEH________ K C A E H - 4 0 0 1 1 1 2 0 1 0 1 1 0 0 1 0 0 0 0 2 0 15 1 1636.7879 E5RH70;H0YBB9;O94903 E5RH70 39 53 PROSC Proline synthase co-transcribed bacterial homolog protein yes no 3 1.4611E-05 91.307 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 1 2 1 8590400 1515200 1708000 1208200 2297400 0 1861500 961 339 980 4452;4453;4454;4455;4456;4457;4458 3078;3079;3080;3081 3080 4 CAECGKGFGDSSAR HTGEKPYKCAECGKGF GFGDSSARIKHQRGHL K C A A R I 2 1 0 1 2 0 1 3 0 0 0 1 0 1 0 2 0 0 0 0 0 14 1 1500.6086 Q96MX3 Q96MX3 573 586 ZNF48 Zinc finger protein 48 yes yes 3 0.0026211 63.185 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 2 5376100 650050 681310 1269200 738560 718640 1318300 962 1408 981 4459;4460;4461;4462;4463;4464;4465 3082;3083 3082 2 CAECGKGFGDSSARIK HTGEKPYKCAECGKGF GDSSARIKHQRGHLVL K C A I K H 2 1 0 1 2 0 1 3 0 1 0 2 0 1 0 2 0 0 0 0 0 16 2 1741.7876 Q96MX3 Q96MX3 573 588 ZNF48 Zinc finger protein 48 yes yes 4 0.0030083 53.395 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 7803400 839300 981610 1285400 3389500 1307500 0 963 1408 982 4466;4467;4468;4469;4470 3084;3085;3086;3087 3084 3 CAEIDREMISSLGVSK EKVSLSSKCAEIDREM ISSLGVSKAVLNNVIF K C A S K A 1 1 0 1 1 0 2 1 0 2 1 1 1 0 0 3 0 0 0 1 0 16 1 1793.8652 Q92878-2;Q92878;E7EN38;E7ESD9;C9JNH8 Q92878-2 139 154 RAD50 DNA repair protein RAD50 yes no 3 2.5881E-37 113.52 By matching By matching By matching By MS/MS By matching By matching 1 3931500 0 0 0 3931500 0 0 964 1362 983 4471 3088 3088 1 CAESLQPVAAAVEER ISSATTIKCAESLQPV VAAAVEERATGPVLIS K C A E R A 4 1 0 0 1 1 3 0 0 0 1 0 0 0 1 1 0 0 0 2 0 15 0 1628.7828 Q8NFC6 Q8NFC6 2164 2178 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 0.010246 67.136 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1507700 0 0 0 0 1507700 0 965 1325 984 4472;4473 3089;3090 3089 1 CAGCTNPISGLGGTK FCDLYAKKCAGCTNPI ISGLGGTKYISFEERQ K C A T K Y 1 0 1 0 2 0 0 4 0 1 1 1 0 0 1 1 2 0 0 0 0 15 0 1491.681 Q14192 Q14192 221 235 FHL2 Four and a half LIM domains protein 2 yes yes 2 0.008098 48.899 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3051900 340130 0 0 0 680130 2031600 966 1101 985 4474;4475;4476 3091 3091 1 CAPMSDLTDLK RSRTWGQKCAPMSDLT MSDLTDLKSLPDTELM K C A L K S 1 0 0 2 1 0 0 0 0 0 2 1 1 0 1 1 1 0 0 0 0 11 0 1249.5683 P46013;F5H4V4;P46013-2 P46013 958 968 MKI67 Antigen KI-67 no no 2 0.0020528 89.266 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 352190000 0 169250000 42110000 16579000 34638000 89610000 967 919;920 986 4477;4478;4479;4480;4481 3092;3093;3094;3095 3092 4 CASQSGMTAYGTR GLQMGTNKCASQSGMT GMTAYGTRRHLYDPKN K C A T R R 2 1 0 0 1 1 0 2 0 0 0 0 1 0 0 2 2 0 1 0 0 13 0 1388.5813 E7ENR3;B4DDF4;Q99439;B4DUT8;H3BTZ5;Q99439-2;H3BVI6;H3BQH0 E7ENR3 154 166 CNN2 Calponin-2 yes no 2 0.0090312 56.569 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 4287000 415520 773970 710150 0 0 2387300 968 80 987 4482;4483;4484;4485 3096;3097 3096 2 CASQSGMTAYGTRR GLQMGTNKCASQSGMT MTAYGTRRHLYDPKNH K C A R R H 2 2 0 0 1 1 0 2 0 0 0 0 1 0 0 2 2 0 1 0 0 14 1 1544.6824 E7ENR3;B4DDF4;Q99439;B4DUT8;H3BTZ5;Q99439-2;H3BVI6;H3BQH0 E7ENR3 154 167 CNN2 Calponin-2 yes no 3 0.0013411 63.091 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 14273000 1031400 1920000 2292600 1126800 1590700 6311400 969 80 988 4486;4487;4488;4489;4490;4491 3098;3099 3099 2 CASQVGMTAPGTR SLQMGTNKCASQVGMT GMTAPGTRRHIYDTKL K C A T R R 2 1 0 0 1 1 0 2 0 0 0 0 1 0 1 1 2 0 0 1 0 13 0 1334.6071 E7ENR3;B4DDF4;Q99439;B4DUT8;H3BTZ5;Q99439-2 E7ENR3 194 206 CNN2 Calponin-2 yes no 2 1.7506E-34 120.9 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4818500 0 0 595900 0 780480 3442100 970 80 989 4492;4493;4494 3100 3100 1 CASQVGMTAPGTRR SLQMGTNKCASQVGMT MTAPGTRRHIYDTKLG K C A R R H 2 2 0 0 1 1 0 2 0 0 0 0 1 0 1 1 2 0 0 1 0 14 1 1490.7082 E7ENR3;B4DDF4;Q99439;B4DUT8;H3BTZ5;Q99439-2 E7ENR3 194 207 CNN2 Calponin-2 yes no 3 0.0030466 55.196 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 2 1 1 1 1 8782300 1625400 1903600 1900800 1251200 2101400 0 971 80 990 4495;4496;4497;4498;4499;4500 3101;3102;3103;3104;3105 3103 5 CASQVGMTAPGTRRHIYDTK SLQMGTNKCASQVGMT RRHIYDTKLGTDKCDN K C A T K L 2 2 0 1 1 1 0 2 1 1 0 1 1 0 1 1 3 0 1 1 0 20 2 2248.0841 E7ENR3;B4DDF4;Q99439;B4DUT8;H3BTZ5;Q99439-2 E7ENR3 194 213 CNN2 Calponin-2 yes no 3;4;5 0.014109 46.121 By matching By MS/MS By MS/MS By matching By matching By MS/MS 3 3 3 2 3 38099000 0 5464800 12596000 3790200 4783000 11465000 972 80 991 4501;4502;4503;4504;4505;4506;4507;4508;4509;4510;4511;4512;4513;4514 3106;3107;3108 3106 2 CATCSQPILDR CYVATLEKCATCSQPI CSQPILDRILRAMGKA K C A D R I 1 1 0 1 2 1 0 0 0 1 1 0 0 0 1 1 1 0 0 0 0 11 0 1319.5962 Q15654;H7BZE2 Q15654 339 349 TRIP6 Thyroid receptor-interacting protein 6 yes no 2 0.0049151 74.611 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 2 1 1 1 7490400 669690 1247900 1055600 355180 1103900 3058100 973 1145 992 4515;4516;4517;4518;4519;4520;4521 3109;3110;3111;3112;3113 3113 5 CATVSAAVAER AEEVKTGKCATVSAAV VSAAVAERESAEVVKE K C A E R E 4 1 0 0 1 0 1 0 0 0 0 0 0 0 0 1 1 0 0 2 0 11 0 1133.5499 Q9H0U9 Q9H0U9 160 170 TSPYL1 Testis-specific Y-encoded-like protein 1 yes yes 2 0.014934 59.198 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1914500 0 561160 470570 0 0 882790 974 1482 993 4522;4523;4524 3114 3114 1 CAVCGDNASCQHYGVR APGGSEGRCAVCGDNA SCQHYGVRTCEGCKGF R C A V R T 2 1 1 1 3 1 0 2 1 0 0 0 0 0 0 1 0 0 1 2 0 16 0 1852.7403 Q15627;P22736;P22736-2;F5GXF0;H3BT85 Q15627 267 282 NR4A1 Nuclear receptor subfamily 4 group A member 1 yes no 3 0.0012038 76.01 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 2523600 385160 0 0 0 1011200 1127200 975 489 994 4525;4526;4527 3115;3116;3117 3116 3 CCAADDKEACFAVEGPK NFVAFVDKCCAADDKE CFAVEGPKLVVSTQTA K C C P K L 4 0 0 2 3 0 2 1 0 0 0 2 0 1 1 0 0 0 0 1 0 17 1 1926.791 CON__P02769 CON__P02769 581 597 yes yes 3 0.0035963 50.376 By matching By matching By matching By matching By MS/MS By matching 1 1 1 3464900 0 555250 0 0 755870 2153800 + 976 294 995 4528;4529;4530 3118 3118 1 CCAFNDTREEGK EASTCAQKCCAFNDTR NDTREEGKALLRQILQ K C C G K A 1 1 1 1 2 0 2 1 0 0 0 1 0 1 0 0 1 0 0 0 0 12 1 1485.5977 Q9UJX2;Q9UJX2-3 Q9UJX2 536 547 CDC23 Cell division cycle protein 23 homolog yes no 3 8.742E-12 107.11 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 6080300 997240 1278500 1138600 611950 0 2054000 977 1598 996 4531;4532;4533;4534;4535 3119;3120 3120 2 CCGCVFSER RHRFCFLRCCGCVFSE CGCVFSERALKEIKAE R C C E R A 0 1 0 0 3 0 1 1 0 0 0 0 0 1 0 1 0 0 0 1 0 9 0 1173.4365 Q9BY42;A8MSH5;A2A2L5;A2A2L6 Q9BY42 139 147 RTFDC1 Protein RTF2 homolog yes no 2 0.00035419 111.46 By matching By matching By matching By matching By MS/MS By matching 1 1 14997000 0 0 5543800 0 9453600 0 978 38 997 4536;4537 3121 3121 1 CCNHPYLINGAEEK NTMMELRKCCNHPYLI LINGAEEKILEEFKET K C C E K I 1 0 2 0 2 0 2 1 1 1 1 1 0 0 1 0 0 0 1 0 0 14 0 1703.7396 H7BXG5;Q9HCK8-2;Q9HCK8;H0YJG4;Q9P2D1;Q8TD26 Q9P2D1 1251 1264 CHD8;CHD7;CHD6 Chromodomain-helicase-DNA-binding protein 8;Chromodomain-helicase-DNA-binding protein 7;Chromodomain-helicase-DNA-binding protein 6 no no 3 0.0085811 50.806 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 10704000 1179400 2002100 1233900 931340 1709700 3647100 979 1578;1335;653 998 4538;4539;4540;4541;4542;4543 3122;3123 3122 2 CCSGAIIVLTK GAVEASFKCCSGAIIV GAIIVLTKSGRSAHQV K C C T K S 1 0 0 0 2 0 0 1 0 2 1 1 0 0 0 1 1 0 0 1 0 11 0 1220.6257 P14618;E9PF79;P14618-3 P14618 423 433 PKM Pyruvate kinase PKM yes no 2 0.01109 63.602 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3998200 0 841590 0 640740 0 2515800 980 837 999 4544;4545;4546 3124 3124 1 CCTESLVNRRPCFSALTPDETYVPK PVSEKVTKCCTESLVN PDETYVPKAFDEKLFT K C C P K A 1 2 1 1 3 0 2 0 0 0 2 1 0 1 3 2 3 0 1 2 0 25 2 2999.3939 CON__P02769 CON__P02769 499 523 yes yes 4 1.1034E-12 71.001 By matching By MS/MS By matching By matching By matching By matching 1 1 33707000 0 31481000 0 2225400 0 0 + 981 294 1000 4547;4548 3125;3126 3126 2 CCWCLCCGCEVR RYVPEHERCCWCLCCG LCCGCEVREHLSHGNL R C C V R E 0 1 0 0 6 0 1 1 0 0 1 0 0 0 0 0 0 1 0 1 0 12 0 1718.5914 Q86UT8;E9PJ16;E9PPT8 Q86UT8 63 74 CCDC84 Coiled-coil domain-containing protein 84 yes no 2 0.0079543 61.11 By matching By matching By matching By matching By matching By MS/MS 1 4585200 0 0 0 0 0 4585200 982 1263 1001 4549 3127 3127 1 CDDFVVNDTK SYSTYCYRCDDFVVND DFVVNDTKLGLVQKVR R C D T K L 0 0 1 3 1 0 0 0 0 0 0 1 0 1 0 0 1 0 0 2 0 10 0 1211.5129 Q6JHV3;H0YMI4;Q9Y6I4;B3KMX7;H0YLB7;H0YKU8;F5H1A6;H0YL81;B4DV65;H0YLG0 Q6JHV3 76 85 USP3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 2 0.010742 72.531 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 6732900 0 1479500 770750 715360 1276200 2491000 983 628 1002 4550;4551;4552;4553;4554 3128 3128 1 CDFTEDQTAEFK ________________ EDQTAEFKEAFQLFDR M C D F K E 1 0 0 2 1 1 2 0 0 0 0 1 0 2 0 0 2 0 0 0 0 12 0 1489.6031 F8W1R7;P60660-2;P60660;G3V1V0;F8VZV5;G8JLA2;B7Z6Z4;G3V1Y7 F8W1R7 2 13 MYL6 Myosin light polypeptide 6 yes no 2 0.020943 44.426 By matching By MS/MS By matching By matching By matching By matching 1 4763700 0 4763700 0 0 0 0 984 552 1003 4555 3129 3129 1 CDLFIQEGAR VWNRTAEKCDLFIQEG LFIQEGARLGRTPAEV K C D A R L 1 1 0 1 1 1 1 1 0 1 1 0 0 1 0 0 0 0 0 0 0 10 0 1207.5656 Q49A26-2;Q49A26;Q49A26-4;Q49A26-5 Q49A26-2 286 295 GLYR1 Putative oxidoreductase GLYR1 no no 2 0.0032766 89.561 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 25812000 7351200 0 4758400 1895900 2559900 9246300 985 1168;1169 1004 4556;4557;4558;4559;4560 3130;3131;3132 3130 3 CDMSALQR EKVEYVIKCDMSALQR CDMSALQRVLYRHMQA K C D Q R V 1 1 0 1 1 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 8 0 979.42154 P51532-5;P51532-2;P51532-3;P51532-4;P51532;Q9HBD4;F5H0X5 P51532-5 998 1005 SMARCA4 Transcription activator BRG1 yes no 2 0.023129 77.318 By matching By matching By matching By matching By matching By MS/MS 1 1 2632900 0 0 0 0 552030 2080900 986 952 1005 4561;4562 3133 3133 1 CDNCGIEPIQGVR FVQHVGFKCDNCGIEP IEPIQGVRWHCQDCPP K C D V R W 0 1 1 1 2 1 1 2 0 2 0 0 0 0 1 0 0 0 0 1 0 13 0 1516.6762 Q8IYH5-2;Q8IYH5;Q8IYH5-3 Q8IYH5-2 822 834 ZZZ3 ZZ-type zinc finger-containing protein 3 yes no 2 0.030411 44.511 By matching By MS/MS By matching By matching By matching By matching 1 1 2276600 0 845280 0 0 0 1431300 987 1290 1006 4563;4564 3134 3134 1 CDQCSYVASNQHEVTR HSGEKPFKCDQCSYVA SNQHEVTRHARQVHNG K C D T R H 1 1 1 1 2 2 1 0 1 0 0 0 0 0 0 2 1 0 1 2 0 16 0 1952.8105 Q13127;A0PJ83;Q13127-4;F8WAN5 Q13127 334 349 REST RE1-silencing transcription factor yes no 3 0.034242 36.504 By matching By matching By matching By matching By matching By MS/MS 1 1 1781700 0 551240 0 0 0 1230400 988 1072 1007 4565;4566 3135 3135 1 CDRAFSRSDHLALHMK HRPFQCQKCDRAFSRS DHLALHMKRHF_____ K C D M K R 2 2 0 2 1 0 0 0 2 0 2 1 1 1 0 2 0 0 0 0 0 16 2 1942.9254 O43474-4;O43474-1;O43474 O43474-4 411 426 KLF4 Krueppel-like factor 4 yes no 4 0.00034197 74.133 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 9547300 0 0 2650500 0 3258200 3638600 989 717 1008 4567;4568;4569 3136;3137 3136 2 CDSVCVNPYHYER CQYAFDLKCDSVCVNP VNPYHYERVVSPGIDL K C D E R V 0 1 1 1 2 0 1 0 1 0 0 0 0 0 1 1 0 0 2 2 0 13 0 1697.6926 E7EUB6;Q9BYG6;Q13485 E7EUB6 123 135 SMAD4 Mothers against decapentaplegic homolog 4 yes no 3 0.0072166 56.956 By matching By matching By matching By matching By MS/MS By matching 1 1 1 8258100 0 1853800 0 951270 5453000 0 990 385 1009 4570;4571;4572 3138 3138 1 CDVCNLQFATSSNLK HGEEKPYKCDVCNLQF FATSSNLKIHARKHSG K C D L K I 1 0 2 1 2 1 0 0 0 0 2 1 0 1 0 2 1 0 0 1 0 15 0 1755.792 Q9NPC7-3;Q9NPC7-2;Q9NPC7 Q9NPC7-3 389 403 MYNN Myoneurin yes no 2 0.00058651 82.349 By MS/MS By matching By matching By matching By matching By matching 1 7663500 7663500 0 0 0 0 0 991 1524 1010 4573 3139 3139 1 CEAAFATKDRLR ERPFKCEKCEAAFATK FATKDRLRAHTVRHEE K C E L R A 3 2 0 1 1 0 1 0 0 0 1 1 0 1 0 0 1 0 0 0 0 12 2 1436.7194 C6G496;P56270;G5E927;I3L2Z5;F5H7A6;H3BQI4;H3BQS2;H3BQD6 C6G496 348 359 MAZ Myc-associated zinc finger protein yes no 3 0.0055774 77.662 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 58213000 5541000 6915100 8587500 7567300 14265000 15337000 992 219 1011 4574;4575;4576;4577;4578;4579 3140;3141;3142 3142 3 CEACLRTECGECHFCK RRRTRCRKCEACLRTE CGECHFCKDMKKFGGP K C E C K D 1 1 0 0 5 0 3 1 1 0 1 1 0 1 0 0 1 0 0 0 0 16 1 2115.8053 B4DSN4;Q8NHM5-4;Q8NHM5-2;E7ET57;Q8NHM5-3;E7EML5;Q8NHM5;Q1RLM7;E9PBI6 B4DSN4 56 71 KDM2B;FBXL10 Lysine-specific demethylase 2B yes no 3;4 0.0041712 52.101 By MS/MS By matching By MS/MS By MS/MS By matching By matching 2 1 2 1 1 1 7879000 1194700 1110100 1969800 798730 1327600 1478000 993 124 1012 4580;4581;4582;4583;4584;4585;4586;4587 3143;3144;3145 3143 3 CEALQGFAR ELDALRGKCEALQGFA EALQGFARSVAAARGP K C E A R S 2 1 0 0 1 1 1 1 0 0 1 0 0 1 0 0 0 0 0 0 0 9 0 1050.4917 Q9ULX9-2;Q9ULX9;B0QY71;B0QY70 Q9ULX9-2 82 90 MAFF Transcription factor MafF yes no 2 1.464E-06 114.89 By MS/MS By matching By matching By matching By MS/MS By matching 2 1 1 8913400 5304900 0 0 307210 3301300 0 994 1612 1013 4588;4589;4590;4591 3146;3147;3148 3148 3 CEEETDFVCR SVEDCAAKCEEETDFV EETDFVCRAFQYHSKE K C E C R A 0 1 0 1 2 0 3 0 0 0 0 0 0 1 0 0 1 0 0 1 0 10 0 1343.5122 CON__P06868 CON__P06868 60 69 yes yes 2 6.1059E-48 140.49 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 10075000 2658600 839790 1230900 1134000 2500100 1711600 + 995 295 1014 4592;4593;4594;4595;4596;4597 3149;3150;3151;3152;3153;3154 3153 6 CEEETDFVCRAFQYHSK SVEDCAAKCEEETDFV RAFQYHSKEQQCVVMA K C E S K E 1 1 0 1 2 1 3 0 1 0 0 1 0 2 0 1 1 0 1 1 0 17 1 2204.9255 CON__P06868 CON__P06868 60 76 yes yes 3 0.0040529 49.223 By matching By matching By matching By MS/MS By matching By matching 1 7301300 0 0 0 7301300 0 0 + 996 295 1015 4598 3155 3155 1 CEETGNAYEDLSQKYK EKLILLQRCEETGNAY EDLSQKYKAAQEKNSK R C E Y K A 1 0 1 1 1 1 3 1 0 0 1 2 0 0 0 1 1 0 2 0 0 16 1 1933.8364 P49454 P49454 1029 1044 CENPF Centromere protein F yes yes 3 0.0020307 58.824 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 5408100 891560 1697400 1037200 0 0 1781900 997 936 1016 4599;4600;4601;4602 3156 3156 1 CEFCGEFFENRK PEPARDIRCEFCGEFF GEFFENRKGLSSHARS R C E R K G 0 1 1 0 2 0 3 1 0 0 0 1 0 3 0 0 0 0 0 0 0 12 1 1621.6653 B7ZM82;B3KVH1;O95785;O95785-2 B7ZM82 359 370 WIZ Protein Wiz yes no 2;3 1.2636E-19 118.77 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 2 12174000 0 1308900 0 226770 3395200 7243600 998 212 1017 4603;4604;4605;4606;4607 3157;3158;3159;3160;3161;3162 3160 6 CELCDKGFAQK HTGEKPYKCELCDKGF CDKGFAQKCQLVFHSR K C E Q K C 1 0 0 1 2 1 1 1 0 0 1 2 0 1 0 0 0 0 0 0 0 11 1 1354.601 Q9NPC7-3;Q9NPC7-2;Q9NPC7 Q9NPC7-3 360 370 MYNN Myoneurin yes no 2;3 7.4437E-42 133.81 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 1 2 2 2 14689000 3690700 1671500 0 2982500 2524600 3819800 999 1524 1018 4608;4609;4610;4611;4612;4613;4614;4615;4616 3163;3164;3165;3166;3167;3168 3168 6 CELCDVSCTGADAYAAHIR RGTQNQLRCELCDVSC DAYAAHIRGAKHQKVV R C E I R G 4 1 0 2 3 0 1 1 1 1 1 0 0 0 0 1 1 0 1 1 0 19 0 2167.9085 Q96KR1;B5MEH6 Q96KR1 384 402 ZFR Zinc finger RNA-binding protein yes no 3 4.2841E-145 145.33 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 19726000 0 4653500 0 1140100 0 13933000 1000 1403 1019 4617;4618;4619 3169;3170 3170 2 CELCDVSCTGADAYAAHIRGAK RGTQNQLRCELCDVSC AAHIRGAKHQKVVKLH R C E A K H 5 1 0 2 3 0 1 2 1 1 1 1 0 0 0 1 1 0 1 1 0 22 1 2424.062 Q96KR1;B5MEH6 Q96KR1 384 405 ZFR Zinc finger RNA-binding protein yes no 3;4 1.5715E-111 131.37 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 2 2 2 83492000 9852100 10228000 0 6396700 0 57015000 1001 1403 1020 4620;4621;4622;4623;4624;4625;4626 3171;3172;3173;3174;3175;3176;3177 3172 7 CELCPYSSSQK HTGERPYKCELCPYSS CPYSSSQKTHLTRHMR K C E Q K T 0 0 0 0 2 1 1 0 0 0 1 1 0 0 1 3 0 0 1 0 0 11 0 1357.5642 Q13127;A0PJ83;Q13127-3 Q13127 306 316 REST RE1-silencing transcription factor yes no 2 0.0010215 93.345 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 2906900 0 0 653910 358190 861570 1033300 1002 1072 1021 4627;4628;4629;4630 3178;3179 3178 2 CELNRHTTEAAAGALQNITAGDRR LYNRLLQRCELNRHTT NITAGDRRWAGVLSRL R C E R R W 5 3 2 1 1 1 2 2 1 1 2 0 0 0 0 0 3 0 0 0 0 24 2 2624.2837 Q9Y446 Q9Y446 618 641 PKP3 Plakophilin-3 yes yes 4 0.0085437 37.4 By matching By matching By matching By matching By matching By MS/MS 1 5294900 0 0 0 0 0 5294900 1003 1650 1022 4631 3180 3180 1 CELSKNSDIEQSSDSKVK ESKVEPKKCELSKNSD QSSDSKVKNLFASFPT K C E V K N 0 0 1 2 1 1 2 0 0 1 1 3 0 0 0 5 0 0 0 1 0 18 2 2052.9634 P49792;E9PGT0;P0DJD0;P0DJD1;F8VYC4;Q99666;O14715;E7ES93;B4DTM4;H7BZ48;Q7Z3J3;B4DZH4 P49792 2577 2594 RANBP2;RGPD1;RGPD2;RGPD5;RGPD8;RGPD6;RGPD4 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RanBP2-like and GRIP domain-containing protein 4 no no 3;4 0.001431 63.46 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 2 2 24006000 1899600 2288400 4357700 2270800 11250000 1939800 1004 945;1251 1023 4632;4633;4634;4635;4636;4637;4638;4639;4640;4641;4642;4643 3181;3182;3183;3184;3185;3186;3187 3187 7 CEMEGCGTVLAHPR KPPIQYVRCEMEGCGT GTVLAHPRYLQHHIKY R C E P R Y 1 1 0 0 2 0 2 2 1 0 1 0 1 0 1 0 1 0 0 1 0 14 0 1615.6905 Q96JP5-2;H9KV86;Q96JP5;H3BTR0 Q96JP5-2 313 326 ZFP91;ZFP91-CNTF E3 ubiquitin-protein ligase ZFP91 yes no 2;3 0.00056845 86.803 By matching By matching By matching By matching By MS/MS By MS/MS 1 2 6919100 0 0 0 0 1518600 5400500 1005 677 1024 4644;4645;4646 3188;3189;3190 3188 3 CEPIIMTVPRK FFKLHERKCEPIIMTV IIMTVPRKSDLFQDDL K C E R K S 0 1 0 0 1 0 1 0 0 2 0 1 1 0 2 0 1 0 0 1 0 11 1 1342.7101 Q9ULV4;A7MAP0;B4E3S0;H0YHL7;B3KRY9;Q6QEF8-4;Q6QEF8-3;Q6QEF8-2;Q6QEF8-5;Q6QEF8;F8W759 Q9ULV4 343 353 CORO1C;CORO6 Coronin-1C;Coronin;Coronin-6 yes no 3 0.015044 60.641 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 4728400 356220 1458400 0 0 0 2913800 1006 33 1025 4647;4648;4649 3191;3192 3192 1 CESAFLSK VFQFLNAKCESAFLSK CESAFLSKRNPRQINW K C E S K R 1 0 0 0 1 0 1 0 0 0 1 1 0 1 0 2 0 0 0 0 0 8 0 940.43242 C9JXB8;C9JNW5;P83731 C9JXB8 36 43 RPL24 60S ribosomal protein L24 yes no 2 0.012377 90.601 By matching By matching By matching By matching By MS/MS By matching 1 2030300 0 0 0 0 2030300 0 1007 262 1026 4650 3193 3193 1 CEVCEESFPTQAK HEQENSFKCEVCEESF ESFPTQAKLGAHQRSH K C E A K L 1 0 0 0 2 1 3 0 0 0 0 1 0 1 1 1 1 0 0 1 0 13 0 1583.6596 P98168;P98169 P98168 362 374 ZXDA;ZXDB Zinc finger X-linked protein ZXDA;Zinc finger X-linked protein ZXDB yes no 2 0.0015158 79.875 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 4742800 0 1142600 1172900 898750 0 1528500 1008 1018 1027 4651;4652;4653;4654 3194;3195;3196 3194 3 CFEISDADTK LGKGGFAKCFEISDAD EISDADTKEVFAGKIV K C F T K E 1 0 0 2 1 0 1 0 0 1 0 1 0 1 0 1 1 0 0 0 0 10 0 1184.502 P53350;I3L387;Q58A51 P53350 67 76 PLK1;Plk-1 delta Serine/threonine-protein kinase PLK1 yes no 2 3.0707E-16 124.67 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 23270000 876530 4880800 2869600 1374700 3728300 9540000 1009 962 1028 4655;4656;4657;4658;4659;4660 3197 3197 1 CFEISDADTKEVFAGK LGKGGFAKCFEISDAD TKEVFAGKIVPKSLLL K C F G K I 2 0 0 2 1 0 2 1 0 1 0 2 0 2 0 1 1 0 0 1 0 16 1 1815.8349 P53350;I3L387;Q58A51 P53350 67 82 PLK1;Plk-1 delta Serine/threonine-protein kinase PLK1 yes no 3 0.00063933 81.992 By MS/MS By matching By matching By matching By matching By matching 1 10609000 10609000 0 0 0 0 0 1010 962 1029 4661 3198 3198 1 CFEVGMSK CQYCRLQKCFEVGMSK CFEVGMSKEAVRNDRN K C F S K E 0 0 0 0 1 0 1 1 0 0 0 1 1 1 0 1 0 0 0 1 0 8 0 956.40957 D6RBI3;B4DSI3;P10826-2;P10826;P10826-3;B7Z4F1;P10276-2;P10276;A8MUP8;F8W8A4;P13631-2;P13631 P13631-2 139 146 RARB;RARG;RARA Retinoic acid receptor beta;Retinoic acid receptor gamma;Retinoic acid receptor alpha no no 2 0.00077455 112.41 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 8793000 0 1288000 1854200 805080 923980 3921700 1011 832;122 1030 4662;4663;4664;4665;4666 3199;3200 3200 2 CFGTGAAGNRTSPQEGERYNYSK HDIIAAEKCFGTGAAG GERYNYSKCTVVVRIM K C F S K C 2 2 2 0 1 1 2 4 0 0 0 1 0 1 1 2 2 0 2 0 0 23 2 2549.1353 P78527;E7EUY0;P78527-2 P78527 1312 1334 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 0.033563 37.993 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 11867000 1443500 2064100 1261800 1179000 2664800 3254300 1012 1012 1031 4667;4668;4669;4670;4671;4672 3201 3201 1 CFIQSSHLIR FKCNQCGKCFIQSSHL IQSSHLIRHQITHTRE K C F I R H 0 1 0 0 1 1 0 0 1 2 1 0 0 1 0 2 0 0 0 0 0 10 0 1259.6445 P17098;B4DSF4 P17098 475 484 ZNF8 Zinc finger protein 8 yes no 3 0.030691 54.539 By matching By matching By matching By matching By matching By MS/MS 1 1 1807900 0 0 0 0 655440 1152400 1013 847 1032 4673;4674 3202 3202 1 CFNQSSSLIIHQR YQCGECGKCFNQSSSL SSLIIHQRTHTGEKPY K C F Q R T 0 1 1 0 1 2 0 0 1 2 1 0 0 1 0 3 0 0 0 0 0 13 0 1588.778 Q8IWY8-2;Q8IWY8;Q8IWY8-4;P17040-2;P17040-3;P17040 Q8IWY8-2 622 634 ZSCAN29;ZSCAN20 Zinc finger and SCAN domain-containing protein 29;Zinc finger and SCAN domain-containing protein 20 yes no 3 0.0020983 64.945 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 6138200 740760 987140 1392500 483530 244850 2289500 1014 1282 1033 4675;4676;4677;4678;4679;4680 3203;3204;3205;3206 3204 4 CFSPGVIEVQEVQGKK EAAEELSRCFSPGVIE VQEVQGKKVARVANPR R C F K K V 0 0 0 0 1 2 2 2 0 1 0 2 0 1 1 1 0 0 0 3 0 16 1 1803.9189 O15160-2;O15160 O15160-2 256 271 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes no 3 1.1819E-38 118.52 By matching By MS/MS By matching By matching By matching By matching 1 11313000 0 11313000 0 0 0 0 1015 704 1034 4681 3207;3208 3208 2 CFTACESEEDKDRTEK DMKEYVERCFTACESE EDKDRTEKLLKEVLQA R C F E K L 1 1 0 2 2 0 4 0 0 0 0 2 0 1 0 1 2 0 0 0 0 16 2 2003.8201 Q96PV6;Q96PV6-2;F8W9Q9;E7EQP8 Q96PV6 263 278 LENG8 Leukocyte receptor cluster member 8 yes no 4 0.0026626 54.898 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 6191500 843160 1474900 1370100 633500 0 1869800 1016 362 1035 4682;4683;4684;4685;4686 3209;3210 3210 2 CFTVSSHLVEHVR YECKECGKCFTVSSHL SHLVEHVRIHTGEKPY K C F V R I 0 1 0 0 1 0 1 0 2 0 1 0 0 1 0 2 1 0 0 3 0 13 0 1569.7722 P58317;B4DNH5 P58317 180 192 ZNF121 Zinc finger protein 121 yes no 3 0.0083656 76.326 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 1017 977 1036 4687 3211 3211 1 CGAAFISNSHLMR EKPYECEKCGAAFISN ISNSHLMRHHRTHLVE K C G M R H 2 1 1 0 1 0 0 1 1 1 1 0 1 1 0 2 0 0 0 0 0 13 0 1462.6809 P13682;B4DUB8 P13682 507 519 ZNF35 Zinc finger protein 35 yes no 3 0.021989 45.891 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 3688800 0 0 0 704190 335200 2649400 1018 835 1037 4688;4689;4690 3212;3213 3213 2 CGAALAGHQLIR ETLSAADRCGAALAGH LAGHQLIRGLGQECVL R C G I R G 3 1 0 0 1 1 0 2 1 1 2 0 0 0 0 0 0 0 0 0 0 12 0 1265.6663 P78527;E7EUY0;P78527-2 P78527 25 36 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2;3 0.014612 53.567 By matching By matching By matching By matching By matching By MS/MS 1 2 2322300 0 180160 0 0 0 2142100 1019 1012 1038 4691;4692;4693 3214;3215 3215 2 CGAPNCSGFLGVRPK GNGKTVCKCGAPNCSG GFLGVRPKNQPIATEE K C G P K N 1 1 1 0 2 0 0 3 0 0 1 1 0 1 2 1 0 0 0 1 0 15 1 1618.7708 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 1803 1817 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 3 0.00079544 78.615 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 10956000 1532400 2294700 1790800 1625600 0 3712400 1020 1404 1039 4694;4695;4696;4697;4698;4699 3216;3217;3218;3219;3220 3219 5 CGDLVFAK SNRQKEYKCGDLVFAK CGDLVFAKMKGYPHWP K C G A K M 1 0 0 1 1 0 0 1 0 0 1 1 0 1 0 0 0 0 0 1 0 8 0 908.44259 P51858;B7Z525 P51858 12 19 HDGF Hepatoma-derived growth factor yes no 2 0.009317 101.43 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 21513000 6749000 0 6111600 0 8652500 0 1021 954 1040 4700;4701;4702 3221;3222 3221 2 CGDSVYAAEK GGAEKCSRCGDSVYAA DSVYAAEKIIGAGKPW R C G E K I 2 0 0 1 1 0 1 1 0 0 0 1 0 0 0 1 0 0 1 1 0 10 0 1098.4652 Q16527;F8VW96;F8VQR7 Q16527 122 131 CSRP2 Cysteine and glycine-rich protein 2 yes no 2 0.015827 67.214 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 2368500 0 951770 1416800 0 0 0 1022 1152 1041 4703;4704 3223;3224 3223 2 CGEDDETIPSEYR AKEEKLEKCGEDDETI ETIPSEYRLKPATDKD K C G Y R L 0 1 0 2 1 0 3 1 0 1 0 0 0 0 1 1 1 0 1 0 0 13 0 1569.6253 G5E9D3;P20810-5;E7ESM9;P20810-7;P20810-6;B7Z468;F8W7E0;H0Y7F0;P20810-3;E9PDE4;E7ES10;P20810-4;E9PCH5;G5E946;B7Z574;P20810-2;P20810;H0Y9H6;E7EVY3;E7EQ12;E7EQA0;D6RAA8;H0YD33 G5E9D3 370 382 CAST Calpastatin yes no 2 2.4544E-34 119.25 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 7489000 0 2024400 0 1947600 0 3517000 1023 375 1042 4705;4706;4707;4708 3225;3226;3227 3227 3 CGEDDETIPSEYRLKPATDK AKEEKLEKCGEDDETI RLKPATDKDGKPLLPE K C G D K D 1 1 0 3 1 0 3 1 0 1 1 2 0 0 2 1 2 0 1 0 0 20 2 2323.0638 G5E9D3;P20810-5;E7ESM9;P20810-7;P20810-6;B7Z468;H0Y7F0;P20810-3;E9PDE4;E7ES10;P20810-4;E9PCH5;G5E946;B7Z574;P20810-2;P20810;H0Y9H6;E7EVY3;E7EQ12;E7EQA0;D6RAA8;H0YD33 G5E9D3 370 389 CAST Calpastatin yes no 3 0.0023182 56.25 By matching By MS/MS By matching By matching By matching By matching 1 1 1247100 0 557920 0 0 0 689180 1024 375 1043 4709;4710 3228;3229 3229 2 CGEESSPVHTSTFLSNTLKK HLIYNPDKCGEESSPV FLSNTLKKKCEESDSE K C G K K K 0 0 1 0 1 0 2 1 1 0 2 2 0 1 1 4 3 0 0 1 0 20 1 2221.0685 Q9H582-2;Q9H582 Q9H582-2 370 389 ZNF644 Zinc finger protein 644 yes no 4 0.032451 29.72 By MS/MS By matching By matching By matching By matching By matching 1 1876700 1876700 0 0 0 0 0 1025 1492 1044 4711 3230 3230 1 CGESGHLARECTIEATA TSEVNCYRCGESGHLA ECTIEATA________ R C G T A - 3 1 0 0 2 0 3 2 1 1 1 0 0 0 0 1 2 0 0 0 0 17 1 1860.8094 B4DP17;P62633-3;P62633-2;P62633;P62633-5;E9PDR7;P62633-4 B4DP17 144 160 CNBP Cellular nucleic acid-binding protein no no 3 0.036877 59.709 By matching By matching By MS/MS By matching By matching By matching 1 0 0 0 0 0 0 0 1026 112;992 1045 4712 3231 3231 1 CGETGHVAINCSK CTKVKCYRCGETGHVA HVAINCSKTSEVNCYR R C G S K T 1 0 1 0 2 0 1 2 1 1 0 1 0 0 0 1 1 0 0 1 0 13 0 1431.6235 B4DP17;P62633-3;P62633-2;P62633;P62633-5;E9PDR7;P62633-4 B4DP17 123 135 CNBP Cellular nucleic acid-binding protein no no 2;3 0.0015665 87.863 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 1 2 2 18961000 1590700 2137800 3337600 1170500 3343300 7380700 1027 112;992 1046 4713;4714;4715;4716;4717;4718;4719;4720;4721;4722;4723 3232;3233;3234;3235 3233 4 CGFCHVGEEENEAR SPSDTRPKCGFCHVGE GEEENEARGKLHIFNA K C G A R G 1 1 1 0 2 0 4 2 1 0 0 0 0 1 0 0 0 0 0 1 0 14 0 1692.6621 B4E0G4;Q8IWS0;E9PC97;Q5JRC6;Q8IWS0-2 B4E0G4 178 191 PHF6 PHD finger protein 6 yes no 3 0.0010115 70.68 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 13740000 1942000 1630000 2167400 1152600 2823400 4024400 1028 152 1047 4724;4725;4726;4727;4728;4729 3236;3237;3238;3239;3240 3240 5 CGFCHVGEEENEARGK SPSDTRPKCGFCHVGE EENEARGKLHIFNAKK K C G G K L 1 1 1 0 2 0 4 3 1 0 0 1 0 1 0 0 0 0 0 1 0 16 1 1877.7785 B4E0G4;Q8IWS0;E9PC97;Q5JRC6;Q8IWS0-2 B4E0G4 178 193 PHF6 PHD finger protein 6 yes no 3;4 0.00051653 77.068 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 2 2 2 1 2 21977000 3482700 3401800 5274100 2863400 2425900 4528600 1029 152 1048 4730;4731;4732;4733;4734;4735;4736;4737;4738;4739;4740;4741 3241;3242;3243;3244;3245;3246;3247;3248;3249 3241 9 CGFGVCVDCYR NLHWVCPRCGFGVCVD GVCVDCYRMKRKNCQQ R C G Y R M 0 1 0 1 3 0 0 2 0 0 0 0 0 1 0 0 0 0 1 2 0 11 0 1391.5421 Q9Y4C1;F5H4E6;F5H070;F8WE62 Q9Y4C1 679 689 KDM3A Lysine-specific demethylase 3A yes no 2 0.038025 48.948 By matching By MS/MS By matching By matching By matching By matching 1 1812500 0 1812500 0 0 0 0 1030 516 1049 4742 3250 3250 1 CGGIDEMQSSR KLEGLFLKCGGIDEMQ IDEMQSSRTMVVMGGV K C G S R T 0 1 0 1 1 1 1 2 0 1 0 0 1 0 0 2 0 0 0 0 0 11 0 1238.502 Q9UQR1;F5H173;C9JRX0;C9K0U4;C9J6Y6 Q9UQR1 14 24 ZNF148 Zinc finger protein 148 yes no 2 0.014262 59.84 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1795900 393680 482930 0 0 0 919270 1031 1626 1050 4743;4744;4745 3251 3251 1 CGICGKGFGDSSAR HTGEKPYKCGICGKGF GFGDSSARIKHQRTHR K C G A R I 1 1 0 1 2 0 0 4 0 1 0 1 0 1 0 2 0 0 0 0 0 14 1 1470.6344 Q96MX3 Q96MX3 222 235 ZNF48 Zinc finger protein 48 yes yes 3 0.0013004 79.639 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 6324800 1306300 813620 1229100 1268700 1096500 610610 1032 1408 1051 4746;4747;4748;4749;4750;4751 3252;3253;3254 3252 2 CGKPPCEVDSPSFPCTHCGK GYQYHQRRCGKPPCEV FPCTHCGKTYRSKAGH R C G G K T 0 0 0 1 4 0 1 2 1 0 0 2 0 1 4 2 1 0 0 1 0 20 1 2318.9541 Q96KM6 Q96KM6 618 637 ZNF512B Zinc finger protein 512B yes yes 3;4 3.5138E-39 112.44 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 2 1 1 19920000 12667000 3620200 0 0 1584400 2048100 1033 1402 1052 4752;4753;4754;4755;4756 3255;3256;3257;3258;3259 3259 5 CGLVIGKGGENIK TYTVPADKCGLVIGKG GKGGENIKSINQQSGA K C G I K S 0 0 1 0 1 0 1 4 0 2 1 2 0 0 0 0 0 0 0 1 0 13 1 1343.7231 Q96I24 Q96I24 366 378 FUBP3 Far upstream element-binding protein 3 yes yes 2;3 2.8001E-34 122.46 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 2 2 1 1 34990000 3953900 7395100 13460000 6501800 1932500 1747500 1034 1394 1053 4757;4758;4759;4760;4761;4762;4763;4764;4765;4766 3260;3261;3262;3263;3264;3265;3266 3263 7 CGLVIGRGGENVK TFSIPTHKCGLVIGRG GRGGENVKAINQQTGA K C G V K A 0 1 1 0 1 0 1 4 0 1 1 1 0 0 0 0 0 0 0 2 0 13 1 1357.7136 Q92945-2;Q92945 Q92945-2 436 448 KHSRP Far upstream element-binding protein 2 yes no 2;3 1.5492E-240 179.67 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 2 2 1403000000 180370000 235580000 158010000 150150000 370680000 308230000 1035 1366 1054 4767;4768;4769;4770;4771;4772;4773;4774;4775;4776;4777;4778;4779;4780 3267;3268;3269;3270;3271;3272;3273;3274;3275;3276;3277;3278;3279 3278 13 CGLVIGRGGENVKAINQQTGAFVEISR TFSIPTHKCGLVIGRG GAFVEISRQLPPNGDP K C G S R Q 2 2 2 0 1 2 2 5 0 3 1 1 0 1 0 1 1 0 0 3 0 27 2 2872.4978 Q92945-2;Q92945 Q92945-2 436 462 KHSRP Far upstream element-binding protein 2 yes no 3;4 2.7606E-09 61.522 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 99369000 0 51478000 13665000 34226000 0 0 1036 1366 1055 4781;4782;4783 3280;3281 3280 2 CGPCNSFVR TPCAPRPRCGPCNSFV GPCNSFVR________ R C G V R - 0 1 1 0 2 0 0 1 0 0 0 0 0 1 1 1 0 0 0 1 0 9 0 1095.459 Q15323;CON__Q9UE12;CON__Q15323;CON__A2A5Y0 Q15323 408 416 KRT31 Keratin, type I cuticular Ha1 yes no 2 1.6235E-19 128.38 By matching By matching By matching By MS/MS By matching By matching 1 8152500 0 0 0 8152500 0 0 + 1037 281 1056 4784 3282 3282 1 CGVCEVCQQPECGK ENAFKRRRCGVCEVCQ CQQPECGKCKACKDMV R C G G K C 0 0 0 0 4 2 2 2 0 0 0 1 0 0 1 0 0 0 0 2 0 14 0 1709.663 F5GX68 F5GX68 653 666 DNMT1 Cytosine-specific methyltransferase no no 2 0.0030137 61.167 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 10481000 1000500 1716100 1804800 741480 1154500 4063400 1038 487 1057 4785;4786;4787;4788;4789;4790 3283;3284;3285;3286;3287;3288 3285 6 CGVCEVCQQPECGKCK ENAFKRRRCGVCEVCQ QPECGKCKACKDMVKF R C G C K A 0 0 0 0 5 2 2 2 0 0 0 2 0 0 1 0 0 0 0 2 0 16 1 1997.7886 F5GX68 F5GX68 653 668 DNMT1 Cytosine-specific methyltransferase no no 3 8.5212E-80 134.37 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 19248000 1610600 4099700 4033500 1699300 2535500 5269200 1039 487 1058 4791;4792;4793;4794;4795;4796 3289 3289 1 CGVCGKGFGDSSAR HTGEKPYKCGVCGKGF GFGDSSARIKHQRTHS K C G A R I 1 1 0 1 2 0 0 4 0 0 0 1 0 1 0 2 0 0 0 1 0 14 1 1456.6187 Q96MX3 Q96MX3 142 155 ZNF48 Zinc finger protein 48 yes yes 3 0.012394 49.356 By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 1 1 1 1 8519000 2457200 725220 1277600 1176100 1535200 1347700 1040 1408 1059 4797;4798;4799;4800;4801;4802;4803 3290;3291;3292 3290 3 CGVCGKGFGDSSARIK HTGEKPYKCGVCGKGF GDSSARIKHQRTHSGE K C G I K H 1 1 0 1 2 0 0 4 0 1 0 2 0 1 0 2 0 0 0 1 0 16 2 1697.7978 Q96MX3 Q96MX3 142 157 ZNF48 Zinc finger protein 48 yes yes 3;4 0.0020988 68.283 By MS/MS By matching By matching By MS/MS By matching By matching 2 1 2474900 1540800 0 0 934130 0 0 1041 1408 1060 4804;4805;4806 3293;3294 3294 2 CGVEFSEPSLATK SVLASTTKCGVEFSEP SEPSLATKRAREDSGM K C G T K R 1 0 0 0 1 0 2 1 0 0 1 1 0 1 1 2 1 0 0 1 0 13 0 1423.6653 Q6PJG2;F6RU81;H7C1L3 Q6PJG2 502 514 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 2 4.7057E-182 171.99 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 58637000 33167000 19551000 0 5918600 0 0 1042 1231 1061 4807;4808;4809 3295;3296;3297 3297 3 CGYPGHLTFECR SVRAGCKKCGYPGHLT GHLTFECRNFLRVDPK K C G C R N 0 1 0 0 2 0 1 2 1 0 1 0 0 1 1 0 1 0 1 0 0 12 0 1495.6337 Q8N9Q2 Q8N9Q2 18 29 SREK1IP1 Protein SREK1IP1 yes yes 3 0.0020293 74.611 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 5060100 962090 1177400 0 0 1117900 1802700 1043 1311 1062 4810;4811;4812;4813 3298;3299 3298 2 CHACLNQALCPAAQGL TCLPVHPRCHACLNQA LCPAAQGL________ R C H G L - 4 0 1 0 3 2 0 1 1 0 3 0 0 0 1 0 0 0 0 0 0 16 0 1782.7964 H3BPD5;P78549 H3BPD5 221 236 NTHL1 Endonuclease III-like protein 1 yes no 2 0 219.74 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 303290000 54504000 63653000 61075000 34887000 89172000 0 1044 636 1063 4814;4815;4816;4817;4818 3300;3301;3302;3303;3304 3300 5 CHLTACQTGVGAK FARNSTLKCHLTACQT CQTGVGAKKGRKKLYE K C H A K K 2 0 0 0 2 1 0 2 1 0 1 1 0 0 0 0 2 0 0 1 0 13 0 1401.6493 P52739-2;P52739 P52739-2 339 351 ZNF131 Zinc finger protein 131 yes no 2;3 0.00062461 92.112 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 3 1 1 1 2 8490300 2614200 730500 794280 1608600 2742800 0 1045 960 1064 4819;4820;4821;4822;4823;4824;4825;4826 3305;3306;3307;3308;3309;3310 3308 6 CIACQCPSKQNQTTAISTPASSEISKAPK RNEASATKCIACQCPS SEISKAPKSGFEGMFI K C I P K S 4 0 1 0 3 3 1 0 0 3 0 3 0 0 3 5 3 0 0 0 0 29 2 3162.5108 P49792 P49792 1744 1772 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 4 0.00093891 37.405 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 59616000 0 14709000 12986000 6560100 11676000 13685000 1046 945 1065 4827;4828;4829;4830;4831 3311;3312;3313 3313 3 CIACQNPGKQNQTTSAVSTPASSETSKAPK RNEASATKCIACQNPG SETSKAPKSGFEGMFT K C I P K S 4 0 2 0 2 3 1 1 0 1 0 3 0 0 3 5 4 0 0 1 0 30 2 3147.4925 P49792 P49792 1626 1655 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 4 0.00035508 36.142 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 161490000 50381000 20307000 29154000 23604000 19077000 18968000 1047 945 1066 4832;4833;4834;4835;4836;4837 3314;3315;3316;3317;3318 3316 5 CIGPGCCHVAQPDSVYCSNDCILK IEAPGASKCIGPGCCH CSNDCILKHAAATMKF K C I L K H 1 0 1 2 5 1 0 2 1 2 1 1 0 0 2 2 0 0 1 2 0 24 0 2809.175 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 397 420 DIDO1 Death-inducer obliterator 1 yes no 3 4.7178E-148 141.74 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 249490000 40182000 71976000 42452000 44211000 6214700 44457000 1048 1447 1067 4838;4839;4840;4841;4842;4843 3319;3320;3321;3322;3323;3324;3325 3324 7 CIIVMPEK AAAVRGYRCIIVMPEK CIIVMPEKMSSEKVDV R C I E K M 0 0 0 0 1 0 1 0 0 2 0 1 1 0 1 0 0 0 0 1 0 8 0 988.50856 P35520;P35520-2;C9JMA6;F5H2U1;B7Z2D6 P35520 165 172 CBS Cystathionine beta-synthase;Cysteine synthase yes no 2 0.016902 82.426 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1918400 409240 335300 0 0 0 1173800 1049 898 1068 4844;4845;4846 3326 3326 1 CILNGINSSAK SRKTKPVKCILNGINS NGINSSAKKNSNWTKI K C I A K K 1 0 2 0 1 0 0 1 0 2 1 1 0 0 0 2 0 0 0 0 0 11 0 1175.5969 Q5FWF5;Q5FWF5-2 Q5FWF5 376 386 ESCO1 N-acetyltransferase ESCO1 yes no 2 0.013912 60.255 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 7645900 698130 802810 1667400 768150 1139800 2569500 1050 1180 1069 4847;4848;4849;4850;4851;4852 3327;3328 3327 2 CIQCGQYLDDPDLK NSKTHPPKCIQCGQYL YLDDPDLKYGQHPPDA K C I L K Y 0 0 0 3 2 2 0 1 0 1 2 1 0 0 1 0 0 0 1 0 0 14 0 1723.7546 F5GX68 F5GX68 353 366 DNMT1 Cytosine-specific methyltransferase no no 2 0 196.84 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 17866000 0 0 2630100 354560 672820 14209000 1051 487 1070 4853;4854;4855;4856 3329;3330 3329 1 CIRAFPNKQGYVLSSIEGR SSLKYQTRCIRAFPNK VLSSIEGRVAVEYLDP R C I G R V 1 2 1 0 1 1 1 2 0 2 1 1 0 1 1 2 0 0 1 1 0 19 2 2194.1317 O43684-2;O43684;B4DDM6 O43684-2 184 202 BUB3 Mitotic checkpoint protein BUB3 yes no 3;4 0.018174 42.226 By matching By matching By matching By MS/MS By matching By matching 2 7576500 0 0 0 7576500 0 0 1052 719 1071 4857;4858 3331;3332 3331 2 CKLPEQESLPNDNK CEDIKSSKCKLPEQES ESLPNDNKDILQRLDP K C K N K D 0 0 2 1 1 1 2 0 0 0 2 2 0 0 2 1 0 0 0 0 0 14 1 1670.7934 Q8NI77 Q8NI77 781 794 KIF18A Kinesin-like protein KIF18A yes yes 3 0.0075837 53.038 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1966800 575900 639700 0 0 0 751200 1053 1332 1072 4859;4860;4861 3333 3333 1 CLAALASLR PDVLDRQKCLAALASL LAALASLRHAKWFQAR K C L L R H 3 1 0 0 1 0 0 0 0 0 3 0 0 0 0 1 0 0 0 0 0 9 0 973.53789 Q12906-5;Q12906-4;Q12906-2;Q12906-6;Q12906-3;C9JFV5;Q12906;G5E9M5 Q12906-5 203 211 ILF3 Interleukin enhancer-binding factor 3 yes no 2 0.031556 63.816 By matching By matching By matching By matching By MS/MS By matching 1 9863800 0 0 0 0 9863800 0 1054 243 1073 4862 3334 3334 1 CLAALASLRHAK PDVLDRQKCLAALASL LASLRHAKWFQARANG K C L A K W 4 1 0 0 1 0 0 0 1 0 3 1 0 0 0 1 0 0 0 0 0 12 1 1309.7289 Q12906-5;Q12906-4;Q12906-2;Q12906-6;Q12906-3;C9JFV5;Q12906;G5E9M5 Q12906-5 203 214 ILF3 Interleukin enhancer-binding factor 3 yes no 2;3 0.001832 79.036 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2 31053000 0 5912800 6309100 3882000 3814100 11135000 1055 243 1074 4863;4864;4865;4866;4867;4868 3335;3336;3337;3338;3339;3340 3336 6 CLACESAKPGTK QNKADSTKCLACESAK ESAKPGTKSGFKGFDT K C L T K S 2 0 0 0 2 0 1 1 0 0 1 2 0 0 1 1 1 0 0 0 0 12 1 1320.6166 P49790;F6QR24;Q4LE47 P49790 871 882 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 2;3 0.0099652 64.945 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 2 2 2 2 2 10609000 707650 2526600 5063300 871100 534440 905610 1056 531 1075 4869;4870;4871;4872;4873;4874;4875;4876;4877;4878;4879 3341;3342;3343;3344 3341 4 CLDALAALRHAK PDVLDRQKCLDALAAL LAALRHAKWFQARANG K C L A K W 4 1 0 1 1 0 0 0 1 0 3 1 0 0 0 0 0 0 0 0 0 12 1 1337.7238 Q96KR1;B5MEH6 Q96KR1 899 910 ZFR Zinc finger RNA-binding protein yes no 3 0.0092627 59.84 By matching By matching By MS/MS By matching By matching By matching 1 1 18689000 0 0 16585000 0 2104300 0 1057 1403 1076 4880;4881 3345 3345 1 CLDPVDTPNPTR CPDTCGIKCLDPVDTP VDTPNPTRRKPGKCPV K C L T R R 0 1 1 2 1 0 0 0 0 0 1 0 0 0 3 0 2 0 0 1 0 12 0 1383.6453 P03973 P03973 72 83 SLPI Antileukoproteinase yes yes 2 0.0036521 68.676 By matching By matching By matching By matching By matching By MS/MS 1 739310 0 0 0 0 0 739310 1058 784 1077 4882 3346 3346 1 CLECESLTER GQLVLRTRCLECESLT ECESLTERREDFQDIS R C L E R R 0 1 0 0 2 0 3 0 0 0 2 0 0 0 0 1 1 0 0 0 0 10 0 1295.5486 O94782 O94782 440 449 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 2 0.03751 54.259 By matching By matching By matching By matching By matching By MS/MS 1 1 976550 0 0 0 0 141680 834870 1059 755 1078 4883;4884 3347 3347 1 CLENRVAVLENQNK RKKKEYVKCLENRVAV AVLENQNKTLIEELKA K C L N K T 1 1 3 0 1 1 2 0 0 0 2 1 0 0 0 0 0 0 0 2 0 14 1 1685.8519 P16220-3;P16220-2;P16220;F8W746;E9PAR2;Q03060-23;Q03060-9;Q03060-24;Q03060-8;A8MPQ2;Q5W1B0;C9IYZ7;Q03060-21;C9JK96;E9PHM1;G5E998;Q03060-6 P16220-3 199 212 CREB1;CREM Cyclic AMP-responsive element-binding protein 1;cAMP-responsive element modulator no no 3 1.0144E-69 134.18 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 44685000 10266000 6823700 6740000 0 6214500 14641000 1060 841 1079 4885;4886;4887;4888;4889 3348;3349;3350;3351;3352;3353 3348 6 CLGELTEVCK QREEMVKKCLGELTEV GELTEVCKSLGKVFGV K C L C K S 0 0 0 0 2 0 2 1 0 0 2 1 0 0 0 0 1 0 0 1 0 10 0 1207.5577 P54132;F5H7R6;F5H3V6 P54132 1218 1227 BLM Bloom syndrome protein yes no 2 0.03751 54.259 By matching By matching By matching By matching By matching By MS/MS 1 1309600 0 0 0 0 0 1309600 1061 965 1080 4890 3354 3354 1 CLGPPTTPGPYR QAPCPRERCLGPPTTP PTTPGPYRSIYFSSPK R C L Y R S 0 1 0 0 1 0 0 2 0 0 1 0 0 0 4 0 2 0 1 0 0 12 0 1314.6391 G5E9E2;Q5J9I4;P29372-2;P29372;A2IDA3 G5E9E2 44 55 MPG DNA-3-methyladenine glycosylase yes no 2 0.0019881 88.596 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 1 1 1 1 42812000 2985800 7310600 4307600 3009100 1480100 23719000 1062 594 1081 4891;4892;4893;4894;4895;4896;4897 3355;3356;3357;3358;3359;3360 3359 6 CLGRFGLESHAHTIQICK LPYQDARKCLGRFGLE AHTIQICKLSGGQKAR K C L C K L 1 1 0 0 2 1 1 2 2 2 2 1 0 1 0 1 1 0 0 0 0 18 1 2126.0513 Q8NE71;Q8NE71-2;H0YGW7;Q5STZ7 Q8NE71 725 742 ABCF1 ATP-binding cassette sub-family F member 1 yes no 4;5 6.529E-05 85.988 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 2 1 1 32232000 5245600 0 13455000 4899000 1684600 6948000 1063 1321 1082 4898;4899;4900;4901;4902;4903 3361;3362;3363;3364;3365 3362 5 CLLHDSIARHPAPEDPDWIK CQSLIYRRCLLHDSIA PEDPDWIKRLLQSPCP R C L I K R 2 1 0 3 1 0 1 0 2 2 2 1 0 0 3 1 0 1 0 0 0 20 1 2369.1586 Q9UKN8 Q9UKN8 788 807 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 4 0.032152 34.388 By matching By matching By matching By matching By matching By MS/MS 1 8437900 0 0 0 0 0 8437900 1064 1602 1083 4904 3366 3366 1 CLLLVHEPK DVISIPSKCLLLVHEP LLLVHEPKLKVDLTKY K C L P K L 0 0 0 0 1 0 1 0 1 0 3 1 0 0 1 0 0 0 0 1 0 9 0 1107.6111 B7Z6Q6;Q99661;Q99661-2;Q5JR91;B7Z7M6;Q5JR89 B7Z6Q6 246 254 KIF2C Kinesin-like protein KIF2C yes no 2 0.0065883 101.46 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 44743000 2330500 5374300 4120200 1690700 5872400 25355000 1065 193 1084 4905;4906;4907;4908;4909;4910 3367;3368;3369;3370 3368 4 CLLLVHEPKLK DVISIPSKCLLLVHEP LVHEPKLKVDLTKYLE K C L L K V 0 0 0 0 1 0 1 0 1 0 4 2 0 0 1 0 0 0 0 1 0 11 1 1348.7901 B7Z6Q6;Q99661;Q99661-2;Q5JR91;B7Z7M6 B7Z6Q6 246 256 KIF2C Kinesin-like protein KIF2C yes no 3 7.8824E-13 115.7 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2 36662000 0 4947100 13134000 938100 8955000 8687900 1066 193 1085 4911;4912;4913;4914;4915;4916 3371;3372;3373;3374 3374 4 CLLLVHEPKLKVDLTK DVISIPSKCLLLVHEP KLKVDLTKYLENQAFC K C L T K Y 0 0 0 1 1 0 1 0 1 0 5 3 0 0 1 0 1 0 0 2 0 16 2 1905.1121 B7Z6Q6;Q99661;Q99661-2;Q5JR91;B7Z7M6 B7Z6Q6 246 261 KIF2C Kinesin-like protein KIF2C yes no 4 2.2297E-07 93.716 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 38600000 0 0 26563000 9736100 2300600 0 1067 193 1086 4917;4918;4919 3375;3376;3377 3375 3 CLMDQATDPNILGR LSEETQVKCLMDQATD TDPNILGRTWEGWEPW K C L G R T 1 1 1 2 1 1 0 1 0 1 2 0 1 0 1 0 1 0 0 0 0 14 0 1602.7494 P78527;E7EUY0;P78527-2 P78527 4106 4119 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0 212.55 By matching By MS/MS By matching By matching By matching By matching 1 41433000 0 41433000 0 0 0 0 1068 1012 1087 4920 3378 3378 1 CLPCPDSQK HASADATRCLPCPDSQ LPCPDSQKLEKECQSS R C L Q K L 0 0 0 1 2 1 0 0 0 0 1 1 0 0 2 1 0 0 0 0 0 9 0 1103.474 Q2TAK8;Q2TAK8-2 Q2TAK8 359 367 MUM1 PWWP domain-containing protein MUM1 yes no 2 0.038196 60.828 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 3359700 252360 849290 1033800 82542 0 1141700 1069 1161 1088 4921;4922;4923;4924;4925 3379 3379 1 CLSPEYAGK REGCVYVKCLSPEYAG LSPEYAGKAFKALHGS K C L G K A 1 0 0 0 1 0 1 1 0 0 1 1 0 0 1 1 0 0 1 0 0 9 0 1023.4695 Q9Y2U8 Q9Y2U8 838 846 LEMD3 Inner nuclear membrane protein Man1 yes yes 2 2.1578E-29 134.05 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 8528500 2077000 1789200 0 1588300 0 3074000 1070 1638 1089 4926;4927;4928;4929 3380;3381 3380 2 CLSSYTSVKENFDK MFESFRYKCLSSYTSV SVKENFDKKGNIILAV K C L D K K 0 0 1 1 1 0 1 0 0 0 1 2 0 1 0 3 1 0 1 1 0 14 1 1676.7716 F2Z2E1;Q96EK7;F5GZX9;F5GY05;Q96EK7-2 F2Z2E1 246 259 FAM120B Constitutive coactivator of peroxisome proliferator-activated receptor gamma yes no 3 0.026447 42.797 By matching By matching By matching By matching By matching By MS/MS 1 1 2881800 0 596180 0 0 0 2285600 1071 474 1090 4930;4931 3382 3382 1 CLTPLVPEDLRK RLLKLFTRCLTPLVPE LVPEDLRKRRKGGEAD R C L R K R 0 1 0 1 1 0 1 0 0 0 3 1 0 0 2 0 1 0 0 1 0 12 1 1439.7806 O60216 O60216 392 403 RAD21 Double-strand-break repair protein rad21 homolog yes yes 3 0.012109 50.467 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 9587500 0 0 0 3481300 6106200 0 1072 726 1091 4932;4933 3383;3384 3384 2 CLYEVGRDDNSK KQKDLNEKCLYEVGRD VGRDDNSKKIMENSGI K C L S K K 0 1 1 2 1 0 1 1 0 0 1 1 0 0 0 1 0 0 1 1 0 12 1 1454.646 Q96QE3;Q96QE3-2 Q96QE3 433 444 ATAD5 ATPase family AAA domain-containing protein 5 yes no 3 3.2129E-08 106.67 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 9199400 816600 1945000 1946400 863510 888990 2738900 1073 1415 1092 4934;4935;4936;4937;4938;4939 3385;3386;3387;3388;3389 3386 5 CLYRHAYPDGR GTCPFGSKCLYRHAYP RHAYPDGRLAEPEKPR K C L G R L 1 2 0 1 1 0 0 1 1 0 1 0 0 0 1 0 0 0 2 0 0 11 1 1406.6514 B4DPR4;C9J494;Q9H000 B4DPR4 300 310 MKRN2 Probable E3 ubiquitin-protein ligase makorin-2 yes no 3 0.014184 60.255 By matching By matching By matching By matching By matching By MS/MS 1 767870 0 0 0 0 0 767870 1074 114 1093 4940 3390 3390 1 CMHCSGENYEGK DIPECEDKCMHCSGEN SGENYEGKIAKTMSGR K C M G K I 0 0 1 0 2 0 2 2 1 0 0 1 1 0 0 1 0 0 1 0 0 12 0 1470.5326 CON__P06868 CON__P06868 192 203 yes yes 3 0.0015235 83.137 By matching By matching By MS/MS By matching By matching By matching 1 4129000 0 0 4129000 0 0 0 + 1075 295 1094 4941 3391 3391 1 CMHCSGENYEGKIAK DIPECEDKCMHCSGEN NYEGKIAKTMSGRDCQ K C M A K T 1 0 1 0 2 0 2 2 1 1 0 2 1 0 0 1 0 0 1 0 0 15 1 1782.7488 CON__P06868 CON__P06868 192 206 yes yes 3 0.0021368 67.102 By MS/MS By matching By matching By matching By matching By matching 1 3832400 3832400 0 0 0 0 0 + 1076 295 1095 4942 3392;3393 3392 2 CMNYDPNQRPFFR ELADLMTRCMNYDPNQ PNQRPFFRAIMRDINK R C M F R A 0 2 2 1 1 1 0 0 0 0 0 0 1 2 2 0 0 0 1 0 0 13 1 1743.761 P23458 P23458 827 839 JAK1 Tyrosine-protein kinase JAK1 yes yes 3 0.03283 43.897 By matching By matching By matching By matching By matching By MS/MS 1 3589900 0 0 0 0 0 3589900 1077 868 1096 4943 3394 3394 1 CMPAPEEIVEELPASK VTGTKRLRCMPAPEEI VEELPASKKQRVAPRA R C M S K K 2 0 0 0 1 0 4 0 0 1 1 1 1 0 3 1 0 0 0 1 0 16 0 1798.8481 P46013;F5H4V4;P46013-2 P46013 3014 3029 MKI67 Antigen KI-67 no no 2 0.029533 38.889 By matching By matching By matching By MS/MS By matching By matching 1 2269200 0 0 0 2269200 0 0 1078 919;920 1097 4944 3395 3395 1 CMPSEPETIKAK SNRKQLIKCMPSEPET EPETIKAKHGSPATDD K C M A K H 1 0 0 0 1 0 2 0 0 1 0 2 1 0 2 1 1 0 0 0 0 12 1 1389.6632 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 1416 1427 SETX Probable helicase senataxin yes no 3 0.015556 54.65 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 8504300 0 1809600 2186500 831450 0 3676800 1079 1250 1098 4945;4946;4947;4948 3396 3396 1 CNAAFGAHDFHR ARQRKCPKCNAAFGAH FGAHDFHRIYIS____ K C N H R I 3 1 1 1 1 0 0 1 2 0 0 0 0 2 0 0 0 0 0 0 0 12 0 1401.5997 O75150-4;H3BP71;O75150;F8W8Z4;Q6ZN99 O75150-4 886 897 RNF40 E3 ubiquitin-protein ligase BRE1B yes no 3 0.0015578 84.605 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1754200 0 465030 527140 0 0 762040 1080 634 1099 4949;4950;4951 3397;3398;3399 3398 3 CNALVTSVDSAPAAVK KEKKSKSKCNALVTSV DSAPAAVKSESQSLPK K C N V K S 4 0 1 1 1 0 0 0 0 0 1 1 0 0 1 2 1 0 0 3 0 16 0 1601.8083 Q96B01-2;Q96B01;B4DUS5 Q96B01-2 237 252 RAD51AP1 RAD51-associated protein 1 yes no 2 1.9941E-11 97.291 By matching By matching By matching By matching By matching By MS/MS 1 1 1 12076000 0 2386700 0 622000 0 9067100 1081 1369 1100 4952;4953;4954 3400 3400 1 CNEEHPAYLASDEITTVRK NELEKMLKCNEEHPAY DEITTVRKNLESRGVE K C N R K N 2 1 1 1 1 0 3 0 1 1 1 1 0 0 1 1 2 0 1 1 0 19 1 2232.0481 O60313;E5KLK1;E5KLJ6;E5KLJ9;O60313-2;E5KLJ5 O60313 801 819 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 3;4 0.00025031 65.808 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 2 1 2 28359000 4615000 4658200 7080000 2591400 0 9414500 1082 336 1101 4955;4956;4957;4958;4959;4960;4961;4962 3401;3402;3403;3404;3405;3406;3407 3403 7 CNELQDIEK YSAVFWERCNELQDIE NELQDIEKIMAQIERG R C N E K I 0 0 1 1 1 1 2 0 0 1 1 1 0 0 0 0 0 0 0 0 0 9 0 1147.5179 F5GZI1;O60264;F6TQG2;P28370-2;P28370 F5GZI1 834 842 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 yes no 2 0.014565 77.744 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 5311400 1498500 1596600 0 475840 521290 1219100 1083 500 1102 4963;4964;4965;4966;4967 3408 3408 1 CNEQPNRVEIYEK SRAIPQVKCNEQPNRV NRVEIYEKTVEVLEPE K C N E K T 0 1 2 0 1 1 3 0 0 1 0 1 0 0 1 0 0 0 1 1 0 13 1 1677.7781 Q7L576;E7EQ04;E7EVJ5;Q96F07-2;E7EVF4;Q96F07;E7EWA4;H0YLJ5;H0YL39 Q7L576 98 110 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 3 2.7656E-09 104.24 By matching By matching By matching By matching By matching By MS/MS 1 1 2084000 0 0 0 0 1119700 964320 1084 359 1103 4968;4969 3409;3410 3410 2 CNFESNFPRGFK QSLLKCPRCNFESNFP SNFPRGFKKHLTHCQS R C N F K K 0 1 2 0 1 0 1 1 0 0 0 1 0 3 1 1 0 0 0 0 0 12 1 1501.6772 Q96JM3 Q96JM3 770 781 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.0084905 60.691 By matching By matching By matching By matching By matching By MS/MS 1 2693100 0 0 0 0 0 2693100 1085 1399 1104 4970 3411 3411 1 CNFESNFPRGFKK QSLLKCPRCNFESNFP NFPRGFKKHLTHCQSR R C N K K H 0 1 2 0 1 0 1 1 0 0 0 2 0 3 1 1 0 0 0 0 0 13 2 1629.7722 Q96JM3 Q96JM3 770 782 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.0022426 92.247 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 5164700 1210800 0 973990 0 635410 2344500 1086 1399 1105 4971;4972;4973;4974 3412 3412 1 CNGQPVPFQQPK FFFDPVRKCNGQPVPF PVPFQQPKHFTGGVMR K C N P K H 0 0 1 0 1 3 0 1 0 0 0 1 0 1 3 0 0 0 0 1 0 12 0 1398.6714 Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-4;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9;Q9NRZ9-8;Q9NRZ9-7 Q9NRZ9-6 205 216 HELLS Lymphoid-specific helicase yes no 2 0.022684 50.786 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4040300 0 623170 514390 0 593620 2309100 1087 1540 1106 4975;4976;4977;4978 3413 3413 1 CNSHLEITIPK PRNHSLPKCNSHLEIT HLEITIPKDLKLKEAE K C N P K D 0 0 1 0 1 0 1 0 1 2 1 1 0 0 1 1 1 0 0 0 0 11 0 1310.6653 Q5FWF5;Q5FWF5-2 Q5FWF5 580 590 ESCO1 N-acetyltransferase ESCO1 yes no 3 0.001111 92.112 By matching By matching By MS/MS By matching By matching By matching 1 1 3619000 198100 0 3420900 0 0 0 1088 1180 1107 4979;4980 3414;3415 3415 2 CNYCSFDTKQPSNLSK HCTDRPFKCNYCSFDT KQPSNLSKHMKKFHGD K C N S K H 0 0 2 1 2 1 0 0 0 0 1 2 0 1 1 3 1 0 1 0 0 16 1 1947.8455 B3KQX0;Q9NPA5-2;E2QRH5;Q5JWM1;Q9NPA5 B3KQX0 215 230 ZFP64 Zinc finger protein 64 homolog, isoforms 1 and 2;Zinc finger protein 64 homolog, isoforms 3 and 4 yes no 3 0.0029447 62.69 By matching By MS/MS By matching By matching By matching By matching 1 1 7748700 0 2883700 0 0 4864900 0 1089 72 1108 4981;4982 3416 3416 1 CQALGVITEK SRKVHTTRCQALGVIT ALGVITEKETQVILLD R C Q E K E 1 0 0 0 1 1 1 1 0 1 1 1 0 0 0 0 1 0 0 1 0 10 0 1117.5801 O75616;O75616-2 O75616 150 159 ERAL1 GTPase Era, mitochondrial yes no 2 0.014795 68.132 By matching By matching By matching By matching By matching By MS/MS 1 3549500 0 0 0 0 0 3549500 1090 748 1109 4983 3417 3417 1 CQNALQQVVAR MRDHTYAKCQNALQQV ALQQVVARQGRPVVIC K C Q A R Q 2 1 1 0 1 3 0 0 0 0 1 0 0 0 0 0 0 0 0 2 0 11 0 1285.6561 Q06210-2;Q06210 Q06210-2 602 612 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 yes no 2 6.4755E-70 147.3 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 9717000 780970 1376200 1259800 897320 1557000 3845700 1091 1041 1110 4984;4985;4986;4987;4988;4989 3418;3419;3420 3419 2 CQNIYLTTGYAGSK DGYACEVRCQNIYLTT TTGYAGSKNGSRDRAT R C Q S K N 1 0 1 0 1 1 0 2 0 1 1 1 0 0 0 1 2 0 2 0 0 14 0 1574.7399 O15226;G3V1N1 O15226 246 259 NKRF NF-kappa-B-repressing factor yes no 2 0.001107 72.898 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 11334000 1428100 1160600 0 982020 3082900 4680000 1092 578 1111 4990;4991;4992;4993;4994 3421 3421 1 CQNLQWMPSK KQCCKMRKCQNLQWMP NLQWMPSKAYLQKQAK K C Q S K A 0 0 1 0 1 2 0 0 0 0 1 1 1 0 1 1 0 1 0 0 0 10 0 1290.5849 Q03164-2;Q03164;E9PQG7;E9PR05 Q03164-2 1194 1203 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 2 0.0027644 97.734 By MS/MS By matching By matching By matching By matching By matching 1 1 2377400 1835200 0 0 542160 0 0 1093 464 1112 4995;4996 3422 3422 1 CQPVFSFGNSEQTKDENSSK KADNEEPKCQPVFSFG TKDENSSKSTFSFSMT K C Q S K S 0 0 2 1 1 2 2 1 0 0 0 2 0 2 1 4 1 0 0 1 0 20 1 2288.0015 P49790;F6QR24;Q4LE47 P49790 1129 1148 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 3 0.003653 47.088 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 17162000 3915000 1751200 3375300 2925500 2764100 2431100 1094 531 1113 4997;4998;4999;5000;5001;5002 3423;3424;3425 3424 3 CQSLGGPAAAYATGK PRSTATPKCQSLGGPA AAAYATGKASGAGGAG K C Q G K A 4 0 0 0 1 1 0 3 0 0 1 1 0 0 1 1 1 0 1 0 0 15 0 1450.6875 Q9ULL5-3 Q9ULL5-3 417 431 PRR12 Proline-rich protein 12 yes yes 2 1.7405E-05 90.476 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 7444400 229900 1525500 1721400 1104900 0 2862700 1095 1608 1114 5003;5004;5005;5006;5007 3426;3427;3428;3429 3427 4 CQTCNASFATR HTSERPHKCQTCNASF CNASFATRDRLRSHLA K C Q T R D 2 1 1 0 2 1 0 0 0 0 0 0 0 1 0 1 2 0 0 0 0 11 0 1314.5445 Q9HBE1-3;Q9HBE1;Q9HBE1-2 Q9HBE1-3 444 454 PATZ1 POZ-, AT hook-, and zinc finger-containing protein 1 yes no 2 0.0091631 66.023 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 2901800 481730 500610 0 0 557860 1361600 1096 1517 1115 5008;5009;5010;5011;5012 3430;3431 3431 2 CQTCTAAFATK HSTERPFKCQTCTAAF CTAAFATKDRLRTHMV K C Q T K D 3 0 0 0 2 1 0 0 0 0 0 1 0 1 0 0 3 0 0 0 0 11 0 1257.5482 Q14119 Q14119 263 273 VEZF1 Vascular endothelial zinc finger 1 yes yes 2 0.0039728 79.492 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 21535000 2391800 2953500 0 1807700 6554900 7827000 1097 1094 1116 5013;5014;5015;5016;5017 3432;3433;3434;3435 3432 4 CQTCTAAFATKDR HSTERPFKCQTCTAAF AAFATKDRLRTHMVRH K C Q D R L 3 1 0 1 2 1 0 0 0 0 0 1 0 1 0 0 3 0 0 0 0 13 1 1528.6762 Q14119 Q14119 263 275 VEZF1 Vascular endothelial zinc finger 1 yes yes 2;3 0.001973 76.01 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 3 2 21593000 1949400 0 1732700 1848600 6152300 9909700 1098 1094 1117 5018;5019;5020;5021;5022;5023;5024;5025 3436;3437;3438;3439;3440;3441 3438 6 CQTCTAAFATKDRLR HSTERPFKCQTCTAAF FATKDRLRTHMVRHEG K C Q L R T 3 2 0 1 2 1 0 0 0 0 1 1 0 1 0 0 3 0 0 0 0 15 2 1797.8614 Q14119 Q14119 263 277 VEZF1 Vascular endothelial zinc finger 1 yes yes 4 0.0024289 64.313 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 41558000 408110 4429700 5614000 5811200 13784000 11511000 1099 1094 1118 5026;5027;5028;5029;5030;5031 3442;3443;3444 3442 3 CQVASAASYDQPK RAMFLVAKCQVASAAS AASYDQPKKAEALEAA K C Q P K K 3 0 0 1 1 2 0 0 0 0 0 1 0 0 1 2 0 0 1 1 0 13 0 1423.6402 B4DFK4;F5H0N1;E9PFB2;F5H0F9;Q9UJX4 B4DFK4 272 284 ANAPC5 Anaphase-promoting complex subunit 5 yes no 2 0.0012105 76.728 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 5430600 556580 629870 599810 409350 1878400 1356500 1100 84 1119 5032;5033;5034;5035;5036;5037 3445;3446;3447 3447 3 CQYVGNCSFAHSPEER IHAQNGRKCQYVGNCS FAHSPEERDMWTFMKE K C Q E R D 1 1 1 0 2 1 2 1 1 0 0 0 0 1 1 2 0 0 1 1 0 16 0 1939.7941 Q9UGR2-2;Q9UGR2;I3L2K5;Q8IWR0 Q9UGR2-2 769 784 ZC3H7B;ZC3H7A Zinc finger CCCH domain-containing protein 7B;Zinc finger CCCH domain-containing protein 7A yes no 3 0.0024542 55.011 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 3160800 174040 784910 749170 0 614790 837900 1101 1590 1120 5038;5039;5040;5041;5042 3448;3449;3450 3448 3 CRDCRVVSHPECR KFGKLSLKCRDCRVVS VVSHPECRDRCPLPCI K C R C R D 0 3 0 1 3 0 1 0 1 0 0 0 0 0 1 1 0 0 0 2 0 13 2 1729.7559 Q9H0H5 Q9H0H5 316 328 RACGAP1 Rac GTPase-activating protein 1 yes yes 4 0.019148 47.712 By matching By matching By MS/MS By matching By matching By matching 1 1 1 2307700 0 576570 1052300 0 0 678810 1102 1479 1121 5043;5044;5045 3451 3451 1 CRDDSFFGETSHNYHK DRLRDGERCRDDSFFG ETSHNYHKFDSEYERM R C R H K F 0 1 1 2 1 0 1 1 2 0 0 1 0 2 0 2 1 0 1 0 0 16 1 1998.8279 P43243;A8MXP9;D6REM6;D6R991;H0Y8T4 P43243 230 245 MATR3 Matrin-3 yes no 4 0.016149 42.257 By matching By matching By MS/MS By matching By matching By matching 1 1 1 5721000 0 0 1610900 1443900 2666100 0 1103 52 1122 5046;5047;5048 3452 3452 1 CRPLEENTADNEK LYLDGSEKCRPLEENT ENTADNEKECIIVWEK K C R E K E 1 1 2 1 1 0 3 0 0 0 1 1 0 0 1 0 1 0 0 0 0 13 1 1574.6995 P49792;E9PGT0 P49792 2696 2708 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 3 0.0022761 66.989 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 20756000 2241200 3947300 5490700 1990900 2500900 4585200 1104 945 1123 5049;5050;5051;5052;5053;5054 3453;3454 3454 2 CRTSGSVYITLKK ELTRLFQKCRTSGSVY SVYITLKKYDGRTKPI K C R K K Y 0 1 0 0 1 0 0 1 0 1 1 2 0 0 0 2 2 0 1 1 0 13 2 1511.813 P37108;H0YLA2 P37108 20 32 SRP14 Signal recognition particle 14 kDa protein yes no 3 1.0969E-15 112.42 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 22611000 2524900 2037600 5132000 4467100 509110 7940600 1105 903 1124 5055;5056;5057;5058;5059;5060 3455;3456;3457;3458;3459 3457 5 CRVFLQDHCLAEGYGTK MMPNRTWRCRVFLQDH LAEGYGTKKTSKHAAA R C R T K K 1 1 0 1 2 1 1 2 1 0 2 1 0 1 0 0 1 0 1 1 0 17 1 2052.951 O15226;G3V1N1 O15226 378 394 NKRF NF-kappa-B-repressing factor yes no 4 0.033989 37.171 By matching By matching By MS/MS By matching By matching By matching 1 1 1 4052200 489050 0 1589900 0 0 1973200 1106 578 1125 5061;5062;5063 3460 3460 1 CRVFLQDHCLAEGYGTKK MMPNRTWRCRVFLQDH AEGYGTKKTSKHAAAD R C R K K T 1 1 0 1 2 1 1 2 1 0 2 2 0 1 0 0 1 0 1 1 0 18 2 2181.0459 O15226;G3V1N1 O15226 378 395 NKRF NF-kappa-B-repressing factor yes no 4 0.0038398 61.127 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 5263900 0 0 1249300 761510 1573500 1679600 1107 578 1126 5064;5065;5066;5067 3461;3462 3461 1 CRVLLCDPEAK YHIGDEVKCRVLLCDP LLCDPEAKKLMMTLKK K C R A K K 1 1 0 1 2 0 1 0 0 0 2 1 0 0 1 0 0 0 0 1 0 11 1 1359.6639 Q14690;F5H7X0 Q14690 505 515 PDCD11 Protein RRP5 homolog yes no 3 0.038334 49.081 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1533600 485470 0 0 0 257170 790970 1108 1112 1127 5068;5069;5070 3463 3463 1 CSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAK ICAGGQDRCSDAAGYP ISPLDLAKLNQVARQQ R C S A K L 5 0 0 4 1 2 1 3 3 2 4 1 0 0 4 3 2 0 2 0 0 37 0 3944.8639 Q15365 Q15365 201 237 PCBP1 Poly(rC)-binding protein 1 yes yes 5 4.0569E-95 99.567 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 106680000 0 0 0 70886000 35794000 0 1109 1135 1128 5071;5072 3464;3465 3464 1 CSDNDGIVHIAVDK IQEAILEKCSDNDGIV IVHIAVDKNSREGCVY K C S D K N 1 0 1 3 1 0 0 1 1 2 0 1 0 0 0 1 0 0 0 2 0 14 0 1541.7144 Q9Y2U8 Q9Y2U8 814 827 LEMD3 Inner nuclear membrane protein Man1 yes yes 3 0.00092384 71.316 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 10798000 2144100 3230200 1767700 0 0 3655900 1110 1638 1129 5073;5074;5075;5076 3466;3467;3468 3466 3 CSDNTEVEVSNLENKQPVESTSAK KPSPSKKRCSDNTEVE PVESTSAKSCSPSPVS R C S A K S 1 0 3 1 1 1 4 0 0 0 1 2 0 0 1 4 2 0 0 3 0 24 1 2664.2185 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 71 94 ANLN Actin-binding protein anillin yes no 3 9.1451E-09 73.672 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 12896000 0 6952200 0 0 0 5944000 1111 1533 1130 5077;5078 3469;3470;3471 3471 3 CSECGTAFGQK HIGEKPFKCSECGTAF CGTAFGQKKYLIKHQN K C S Q K K 1 0 0 0 2 1 1 2 0 0 0 1 0 1 0 1 1 0 0 0 0 11 0 1243.4962 Q15072 Q15072 158 168 ZNF146 Zinc finger protein OZF yes yes 2 0.0044026 77.062 By matching By matching By MS/MS By matching By matching By matching 1 845170 0 0 845170 0 0 0 1112 1131 1131 5079 3472 3472 1 CSHFPDFSYSASSK EELEEDHKCSHFPDFS FSYSASSKIIISDVPS K C S S K I 1 0 0 1 1 0 0 0 1 0 0 1 0 2 1 5 0 0 1 0 0 14 0 1618.6722 C9JA69;Q8WY36-2;Q8WY36;C9J8D0;F8W9C0 C9JA69 403 416 BBX HMG box transcription factor BBX yes no 3 1.3537E-05 89.507 By matching By matching By matching By matching By matching By MS/MS 1 2 3989700 0 1220000 0 0 0 2769600 1113 238 1132 5080;5081;5082 3473;3474 3473 1 CSIVRSHSSNSSPIGK LADDIDRRCSIVRSHS SNSSPIGKSVKTSPTT R C S G K S 0 1 1 0 1 0 0 1 1 2 0 1 0 0 1 6 0 0 0 1 0 16 1 1714.8421 Q5UIP0-2;Q5UIP0;H7C2B5 Q5UIP0-2 2223 2238 RIF1 Telomere-associated protein RIF1 yes no 3 0.014394 43.042 By MS/MS By matching By matching By matching By matching By matching 1 718310 718310 0 0 0 0 0 1114 1201 1133 5083 3475 3475 1 CSLCHQPGHTRPFCPQNR STAKKPRKCSLCHQPG RPFCPQNR________ K C S N R - 0 2 1 0 3 2 0 1 2 0 1 0 0 1 3 1 1 0 0 0 0 18 1 2250.9946 B4DSJ0;B4DK80;Q13472-2;Q13472 B4DSJ0 514 531 TOP3A DNA topoisomerase;DNA topoisomerase 3-alpha yes no 4 0.000569 72.615 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 8137800 0 0 2743300 1512600 1644500 2237500 1115 93 1134 5084;5085;5086;5087 3476 3476 1 CSLPAEEDSVLEK TVTGTGKKCSLPAEED EEDSVLEKLGERKPCN K C S E K L 1 0 0 1 1 0 3 0 0 0 2 1 0 0 1 2 0 0 0 1 0 13 0 1475.6814 E7EVA0;P27816-6;P27816 E7EVA0 652 664 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.0037239 63.185 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 12441000 9381600 0 0 3059500 0 0 1116 388 1135 5088;5089 3477;3478 3478 2 CSNPLDTSVKEK SPDLVVCRCSNPLDTS LDTSVKEKISMFCHVE R C S E K I 0 0 1 1 1 0 1 0 0 0 1 2 0 0 1 2 1 0 0 1 0 12 1 1376.6606 P17812;B7Z9C4 P17812 218 229 CTPS1 CTP synthase 1 yes no 2;3 1.9695E-18 117.03 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 1 2 35284000 3845700 5844900 4571800 2014900 6134300 12872000 1117 852 1136 5090;5091;5092;5093;5094;5095;5096;5097;5098;5099;5100;5101 3479;3480;3481;3482;3483;3484;3485;3486 3481 8 CSPGSPTDPNATLSK GPPGSSRKCSPGSPTD DPNATLSKDEAAVHQD K C S S K D 1 0 1 1 1 0 0 1 0 0 1 1 0 0 3 3 2 0 0 0 0 15 0 1530.6984 Q9P0K8-2;Q9P0K8 Q9P0K8-2 42 56 FOXJ2 Forkhead box protein J2 yes no 2 0.025107 40.941 By matching By matching By matching By MS/MS By matching By matching 1 1 1 2381200 0 0 0 414660 607150 1359400 1118 1572 1137 5102;5103;5104 3487 3487 1 CSPIGVYTSGK QLLKFVEKCSPIGVYT IGVYTSGKGSSAAGLT K C S G K G 0 0 0 0 1 0 0 2 0 1 0 1 0 0 1 2 1 0 1 1 0 11 0 1167.5594 P33992;B1AHB1;E7EQY5 P33992 397 407 MCM5 DNA replication licensing factor MCM5 yes no 2 0.0040752 78.903 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 56521000 146990 12223000 8141700 3577600 5986000 26445000 1119 892 1138 5105;5106;5107;5108;5109;5110 3488;3489;3490;3491 3490 4 CSPSSSSINNSSSKPTK KLIGKKRKCSPSSSSI NSSSKPTKVAKVPAVN K C S T K V 0 0 2 0 1 0 0 0 0 1 0 2 0 0 2 8 1 0 0 0 0 17 1 1766.8105 E9PHP9;O15265;H0YAT6;O15265-2 E9PHP9 694 710 ATXN7 Ataxin-7 yes no 3 0.01973 40.014 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 4018000 798680 460420 956190 584270 657850 560600 1120 439 1139 5111;5112;5113;5114;5115;5116 3492;3493 3492 2 CSQAVYAAEK GGSERCPRCSQAVYAA QAVYAAEKVIGAGKSW R C S E K V 3 0 0 0 1 1 1 0 0 0 0 1 0 0 0 1 0 0 1 1 0 10 0 1125.5125 P21291;E9PND2;B3KVC9;E9PS42;E9PP21 P21291 122 131 CSRP1 Cysteine and glycine-rich protein 1 yes no 2 0.014795 68.132 By matching By matching By MS/MS By matching By matching By matching 1 355820 0 0 355820 0 0 0 1121 859 1140 5117 3494 3494 1 CSQPMVGVSGK ESQATITRCSQPMVGV PMVGVSGKRSKEDEKY R C S G K R 0 0 0 0 1 1 0 2 0 0 0 1 1 0 1 2 0 0 0 2 0 11 0 1148.5318 F5H545;C9JEX3;A6NN98;Q13614 F5H545 267 277 MTMR2 Myotubularin-related protein 2 yes no 2 0.039251 48.568 By matching By matching By matching By matching By matching By MS/MS 1 1 962500 0 321670 0 0 0 640830 1122 31 1141 5118;5119 3495 3495 1 CSRCGDSVYAAEK QKYGGAEKCSRCGDSV DSVYAAEKIIGAGKPW K C S E K I 2 1 0 1 2 0 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 13 1 1501.629 Q16527;F8VW96;F8VQR7 Q16527 119 131 CSRP2 Cysteine and glycine-rich protein 2 yes no 2;3 1.5021E-46 127.3 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 1 2 57047000 2372700 11005000 28531000 2920100 2348300 9870000 1123 1152 1142 5120;5121;5122;5123;5124;5125;5126;5127;5128;5129 3496;3497;3498;3499;3500;3501;3502;3503 3497 8 CSTAIATGLK VSKKTGPRCSTAIATG TAIATGLKNQKPVPAV R C S L K N 2 0 0 0 1 0 0 1 0 1 1 1 0 0 0 1 2 0 0 0 0 10 0 1020.5274 Q9BW19;A2BEW4;A2AB20 Q9BW19 95 104 KIFC1 Kinesin-like protein KIFC1 yes no 2 0.036961 54.486 By matching By matching By matching By matching By matching By MS/MS 1 1 1963700 0 420570 0 0 0 1543200 1124 1456 1143 5130;5131 3504 3504 1 CSTAIATGLKNQKPVPAVPVQK VSKKTGPRCSTAIATG VPAVPVQKSGTSGVPP R C S Q K S 3 0 1 0 1 2 0 1 0 1 1 3 0 0 3 1 2 0 0 3 0 22 2 2306.278 Q9BW19;A2BEW4;A2AB20 Q9BW19 95 116 KIFC1 Kinesin-like protein KIFC1 yes no 3;4 2.6887E-06 79.676 By MS/MS By matching By MS/MS By matching By matching By MS/MS 2 2 3 2 1 2 34153000 5295700 4584100 9347800 1821400 2655900 10448000 1125 1456 1144 5132;5133;5134;5135;5136;5137;5138;5139;5140;5141;5142;5143 3505;3506;3507;3508;3509;3510 3505 5 CSTVEDSCISSSASEMESCSQNSSAKPVIK HENAVIQKCSTVEDSC SSAKPVIKKMLNKKHC K C S I K K 2 0 1 1 3 1 3 0 0 2 0 2 1 0 1 10 1 0 0 2 0 30 1 3264.3891 Q9GZR1-2;Q9GZR1;E7EQN6 Q9GZR1-2 789 818 SENP6 Sentrin-specific protease 6 yes no 3 0.036035 23.69 By matching By matching By MS/MS By matching By matching By matching 1 3862400 0 0 3862400 0 0 0 1126 361 1145 5144 3511 3511 1 CSVLAAANPVYGR IHARLNARCSVLAAAN AANPVYGRYDQYKTPM R C S G R Y 3 1 1 0 1 0 0 1 0 0 1 0 0 0 1 1 0 0 1 2 0 13 0 1376.6871 P25205 P25205 446 458 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.010285 55.261 By matching By MS/MS By matching By matching By matching By matching 1 441430 0 441430 0 0 0 0 1127 873 1146 5145 3512 3512 1 CSVSSLGFNVH DQCSEIVKCSVSSLGF SSLGFNVH________ K C S V H - 0 0 1 0 1 0 0 1 1 0 1 0 0 1 0 3 0 0 0 2 0 11 0 1205.5499 Q92878-2;Q92878;Q92878-3 Q92878-2 1308 1318 RAD50 DNA repair protein RAD50 yes no 2 4.8555E-42 134.84 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 47460000 0 16378000 5655300 3035400 3475000 18916000 1128 1362 1147 5146;5147;5148;5149;5150 3513;3514;3515;3516 3514 4 CTCPVLKGRVQK NGEWLCPRCTCPVLKG VLKGRVQKILHWRWGE R C T Q K I 0 1 0 0 2 1 0 1 0 0 1 2 0 0 1 0 1 0 0 2 0 12 2 1444.7643 Q12873;E9PG89;Q12873-2;H7C2H0 Q12873 500 511 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 3 0.0056254 79.659 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5419300 0 1303500 1078000 254230 0 2783600 1129 430 1148 5151;5152;5153;5154 3517 3517 1 CTGGEVGATSALAPK EIKVVYLRCTGGEVGA ATSALAPKIGPLGLSP R C T P K I 3 0 0 0 1 0 1 3 0 0 1 1 0 0 1 1 2 0 0 1 0 15 0 1417.6871 P30050;P30050-2 P30050 17 31 RPL12 60S ribosomal protein L12 yes no 2 0.0027366 65.467 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 7376200 1182100 1326000 0 413230 2448100 2006800 1130 887 1149 5155;5156;5157;5158;5159 3518;3519;3520;3521 3519 4 CTLAARVDSFHESTEGK AARLVAAKCTLAARVD FHESTEGKVGYELKDE K C T G K V 2 1 0 1 1 0 2 1 1 0 1 1 0 1 0 2 2 0 0 1 0 17 1 1906.8843 Q8WWY3;E7EVX8;Q8WWY3-2;E7ESA8;Q8WWY3-3 Q8WWY3 299 315 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes no 3;4 1.5672E-21 104.16 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 1 1 79493000 19555000 9066900 9785700 21785000 11387000 7913200 1131 1342 1150 5160;5161;5162;5163;5164;5165;5166;5167;5168;5169 3522;3523;3524;3525;3526;3527 3525 6 CTLCSQPGATIGCEIK IKRGKRMKCTLCSQPG ATIGCEIKACVKTYHY K C T I K A 1 0 0 0 3 1 1 2 0 2 1 1 0 0 1 1 2 0 0 0 0 16 0 1793.811 B4E0G4;Q8IWS0;E9PC97;Q5JRC6 B4E0G4 246 261 PHF6 PHD finger protein 6 yes no 2 0.0036643 65.477 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 5957200 0 0 3027400 565070 531030 1833700 1132 152 1151 5170;5171;5172;5173 3528;3529 3529 2 CTLCSQPGATIGCEIKACVK IKRGKRMKCTLCSQPG CEIKACVKTYHYHCGV K C T V K T 2 0 0 0 4 1 1 2 0 2 1 2 0 0 1 1 2 0 0 1 0 20 1 2252.0422 B4E0G4;Q8IWS0;E9PC97;Q5JRC6 B4E0G4 246 265 PHF6 PHD finger protein 6 yes no 3 1.187E-65 120.9 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 33721000 12338000 10177000 0 4798400 0 6408000 1133 152 1152 5174;5175;5176;5177 3530;3531;3532;3533;3534 3532 4 CTSYNIPCTSDMAK NASPRYIRCTSYNIPC PCTSDMAKQAQVPLAA R C T A K Q 1 0 1 1 2 0 0 0 0 1 0 1 1 0 1 2 2 0 1 0 0 14 0 1646.6739 E7EP00;G5EA31;P53992 E7EP00 257 270 SEC24C Protein transport protein Sec24C yes no 2 9.7496E-05 89.624 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 8940200 0 1227700 1333900 951790 2158600 3268300 1134 354 1153 5178;5179;5180;5181;5182 3535;3536;3537 3536 3 CTVVSETISSK SGPTIKPKCTVVSETI VSETISSKNIISRSSN K C T S K N 0 0 0 0 1 0 1 0 0 1 0 1 0 0 0 3 2 0 0 2 0 11 0 1209.5911 Q68D10-2;Q68D10 Q68D10-2 535 545 SPTY2D1 Protein SPT2 homolog yes no 2 0.001691 90.697 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 3119700 0 1206200 0 0 686660 1226800 1135 1217 1154 5183;5184;5185 3538;3539;3540 3538 3 CTYLVLDEADR SGKTNLRRCTYLVLDE LVLDEADRMLDMGFEP R C T D R M 1 1 0 2 1 0 1 0 0 0 2 0 0 0 0 0 1 0 1 1 0 11 0 1353.6235 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 240 250 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 2 2.5002E-55 140.78 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 85554000 16858000 27740000 7550400 4478500 3615000 25312000 1136 1361;629 1155 5186;5187;5188;5189;5190;5191 3541;3542;3543;3544 3543 3 CVACETPKPGTCVK QNKPEAIKCVACETPK PKPGTCVKRALTLTVV K C V V K R 1 0 0 0 3 0 1 1 0 0 0 2 0 0 2 0 2 0 0 2 0 14 1 1605.7313 P49790;F6QR24;Q4LE47 P49790 742 755 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 2;3 0.0011536 77.644 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 25789000 3546900 3295500 2733000 2665500 6700800 6847100 1137 531 1156 5192;5193;5194;5195;5196;5197;5198 3545;3546;3547;3548 3546 4 CVACQNPDKPSPSTSVPAPASFK RNEANATRCVACQNPD VPAPASFKFGTSETSK R C V F K F 3 0 1 1 2 1 0 0 0 0 0 2 0 1 5 4 1 0 0 2 0 23 1 2444.1464 P49792 P49792 1563 1585 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 3 6.9199E-30 98.443 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 20774000 5766000 489750 2847500 1896500 4299700 5474800 1138 945 1157 5199;5200;5201;5202;5203;5204 3549;3550;3551;3552;3553;3554;3555;3556 3552 7 CVDFQTLK FIMPDKCKCVDFQTLK CVDFQTLKLQELPDAV K C V L K L 0 0 0 1 1 1 0 0 0 0 1 1 0 1 0 0 1 0 0 1 0 8 0 1009.4903 P33992;B1AHB1;E7EQY5;B1AHB2 P33992 221 228 MCM5 DNA replication licensing factor MCM5 yes no 2 0.024294 76.221 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 13310000 0 0 1738400 849120 1443400 9279400 1139 892 1158 5205;5206;5207;5208 3557 3557 1 CVICGGPGVSDAYYCK NYGSYQGRCVICGGPG VSDAYYCKECTIQEKD R C V C K E 1 0 0 1 3 0 0 3 0 1 0 1 0 0 1 1 0 0 2 2 0 16 0 1804.7583 Q7RTV0 Q7RTV0 58 73 PHF5A PHD finger-like domain-containing protein 5A yes yes 2 1.9831E-50 120.7 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 11758000 3550000 2500100 0 0 2388400 3319500 1140 1246 1159 5209;5210;5211;5212 3558;3559;3560 3560 3 CVINATGPFTDSVRK QEFDVRAKCVINATGP PFTDSVRKMDDKDAAA K C V R K M 1 1 1 1 1 0 0 1 0 1 0 1 0 1 1 1 2 0 0 2 0 15 1 1663.8352 P43304;F5GYK7;P43304-2;F8W6E4 P43304 285 299 GPD2 Glycerol-3-phosphate dehydrogenase, mitochondrial yes no 3 1.5152E-13 101.43 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 3992400 0 1622300 0 0 0 2370100 1141 918 1160 5213;5214 3561;3562;3563 3561 3 CVLPEEDSGELAKPK GKTYGLWKCVLPEEDS SGELAKPKIGFPETTE K C V P K I 1 0 0 1 1 0 3 1 0 0 2 2 0 0 2 1 0 0 0 1 0 15 1 1670.8185 B0AZV0;Q9Y3F4;B4DNJ6 B0AZV0 211 225 STRAP Serine-threonine kinase receptor-associated protein yes no 3 8.7366E-18 111.72 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 10148000 1210200 1681300 1468400 0 2028800 3759700 1142 55 1161 5215;5216;5217;5218;5219 3564;3565 3564 1 CVPLYHPYQK QLPVHSIKCVPLYHPY PLYHPYQKCSCSLVVA K C V Q K C 0 0 0 0 1 1 0 0 1 0 1 1 0 0 2 0 0 0 2 1 0 10 0 1303.6383 Q9UKN8 Q9UKN8 376 385 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 3 0.04045 51.528 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 18073000 1475600 0 2124800 0 5570200 8902100 1143 1602 1162 5220;5221;5222;5223 3566 3566 1 CVRPAGNASFSK CLIEDGERCVRPAGNA AGNASFSKRVQKSISQ R C V S K R 2 1 1 0 1 0 0 1 0 0 0 1 0 1 1 2 0 0 0 1 0 12 1 1292.6296 E9PAY2;E9PAU7;Q9HAJ7 E9PAY2 38 49 SAP30L Histone deacetylase complex subunit SAP30L yes no 3 0.0038507 67.879 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 2865400 0 595840 567580 252300 597280 852370 1144 400 1163 5224;5225;5226;5227;5228 3567;3568 3568 2 CVSAPDLTIEK LLSTQNNRCVSAPDLT APDLTIEKRLPFSSLS R C V E K R 1 0 0 1 1 0 1 0 0 1 1 1 0 0 1 1 1 0 0 1 0 11 0 1231.6118 Q8NCN4 Q8NCN4 337 347 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 2 0.039644 59.367 By matching By MS/MS By matching By matching By matching By matching 1 1 1588400 0 767510 0 0 0 820890 1145 1318 1164 5229;5230 3569 3569 0 CVSCQNLNPSNK KNASTAKKCVSCQNLN QNLNPSNKELVGPPLA K C V N K E 0 0 3 0 2 1 0 0 0 0 1 1 0 0 1 2 0 0 0 1 0 12 0 1419.6235 P49792 P49792 1372 1383 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 2 0.0018566 84.169 By matching By matching By matching By matching By matching By MS/MS 1 1 1561800 0 0 0 0 815190 746640 1146 945 1165 5231;5232 3570 3570 1 CVSQCAAFENPKGLIHGCSK KAKTEPNKCVSQCAAF GLIHGCSKDNRNDTEG K C V S K D 2 0 1 0 3 1 1 2 1 1 1 2 0 1 1 2 0 0 0 1 0 20 1 2262.0344 E9PFZ0;P38398-4;P38398-2;P38398;E9PFC7;E7EP70;F8W8H7;E7EMP0 E9PFZ0 754 773 BRCA1 Breast cancer type 1 susceptibility protein yes no 4 0.0015676 52.185 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 10270000 0 3869800 2347900 0 0 4052400 1147 426 1166 5233;5234;5235 3571;3572 3571 1 CVTCNYCSQLCK FARRLGLRCVTCNYCS NYCSQLCKKGATKELD R C V C K K 0 0 1 0 4 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 12 0 1591.6251 Q9UBW7;Q5W0Q3 Q9UBW7 724 735 ZMYM2 Zinc finger MYM-type protein 2 yes no 2 0.010791 58.32 By matching By matching By matching By matching By matching By MS/MS 1 1 1466200 0 0 0 0 212150 1254000 1148 1585 1167 5236;5237 3573 3573 1 CVTTELYADSSQLSR GYVGDRFKCVTTELYA ADSSQLSREQRALQME K C V S R E 1 1 0 1 1 1 1 0 0 0 2 0 0 0 0 3 2 0 1 1 0 15 0 1728.7989 Q6W2J9;Q6W2J9-4;Q6W2J9-2;H7BYY2;Q6W2J9-3;A1A564 Q6W2J9 979 993 BCOR BCL-6 corepressor yes no 2 6.7363E-105 147.12 By matching By MS/MS By matching By matching By matching By matching 1 3431600 0 3431600 0 0 0 0 1149 1237 1168 5238 3574 3574 1 CWGTAETNVSCPQCR ICCACLARCWGTAETN NVSCPQCRETFPQRHM R C W C R E 1 1 1 0 3 1 1 1 0 0 0 0 0 0 1 1 2 1 0 1 0 15 0 1824.7342 B0V297;P14373-2;P14373 B0V297 43 57 TRIM27 Zinc finger protein RFP yes no 2 0.00066963 80.746 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 10449000 1206500 0 933430 987280 3423200 3898400 1150 59 1169 5239;5240;5241;5242;5243 3575;3576;3577;3578;3579 3578 5 CYGFVTMSTSDEATK NARSPGARCYGFVTMS STSDEATKCISHLHRT R C Y T K C 1 0 0 1 1 0 1 1 0 0 0 1 1 1 0 2 3 0 1 1 0 15 0 1695.712 Q14151;A8MXT5;C9JPX0;F5GXS4 Q14151 449 463 SAFB2 Scaffold attachment factor B2 yes no 2 1.9483E-199 168.67 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 39776000 0 5649100 8531600 2537000 5811900 17246000 1151 1097 1170 5244;5245;5246;5247;5248 3580;3581;3582;3583;3584;3585 3582 6 CYGIVTMSSSTEVSR NARSPGAKCYGIVTMS SSSTEVSRCIAHLHRT K C Y S R C 0 1 0 0 1 0 1 1 0 1 0 0 1 0 0 4 2 0 1 2 0 15 0 1675.7546 Q9NWH9;H7BXE3;H7C3F4 Q9NWH9 426 440 SLTM SAFB-like transcription modulator yes no 2 0.0026484 63.29 By matching By matching By matching By matching By matching By MS/MS 1 1 2045500 0 661770 0 0 0 1383700 1152 1554 1171 5249;5250 3586 3586 1 CYLGATCAYDAAK GHYAVAAKCYLGATCA TCAYDAAKVLAKKGDA K C Y A K V 4 0 0 1 2 0 0 1 0 0 1 1 0 0 0 0 1 0 2 0 0 13 0 1462.6221 Q8TEQ6 Q8TEQ6 1045 1057 GEMIN5 Gem-associated protein 5 yes yes 2 0.0094432 56.139 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3891900 0 997180 0 923330 0 1971400 1153 1338 1172 5251;5252;5253 3587 3587 1 CYRCGETGHVAINCSK QKDCTKVKCYRCGETG HVAINCSKTSEVNCYR K C Y S K T 1 1 1 0 3 0 1 2 1 1 0 1 0 0 0 1 1 0 1 1 0 16 1 1910.8186 B4DP17;P62633-3;P62633-2;P62633;P62633-5;E9PDR7;P62633-4 B4DP17 120 135 CNBP Cellular nucleic acid-binding protein no no 3;4 2.7829E-37 113.11 By matching By MS/MS By MS/MS By MS/MS By matching By matching 2 2 1 2 1 2 108950000 15604000 20529000 6047300 30696000 8293700 27776000 1154 112;992 1173 5254;5255;5256;5257;5258;5259;5260;5261;5262;5263 3588;3589;3590;3591;3592;3593 3592 6 CYSCGEFGHIQK CDHADEQKCYSCGEFG GEFGHIQKDCTKVKCY K C Y Q K D 0 0 0 0 2 1 1 2 1 1 0 1 0 1 0 1 0 0 1 0 0 12 0 1484.6177 B4DP17;P62633-3;P62633-2;P62633;P62633-5;E9PDR7;P62633-4 B4DP17 102 113 CNBP Cellular nucleic acid-binding protein no no 2;3 0.00028541 94.82 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 100970000 6934600 15965000 16897000 12104000 20563000 28512000 1155 112;992 1174 5264;5265;5266;5267;5268;5269;5270;5271;5272;5273;5274;5275 3594;3595;3596;3597;3598;3599;3600;3601;3602 3600 9 DAALATALGDK YEAALNSKDAALATAL LATALGDKKSLEGDLE K D A D K K 4 0 0 2 0 0 0 1 0 0 2 1 0 0 0 0 1 0 0 0 0 11 0 1044.5451 E9PBF6;P20700 E9PBF6 146 156 LMNB1 Lamin-B1 yes no 2 0.011767 62.799 By matching By MS/MS By matching By matching By matching By matching 1 1313600 0 1313600 0 0 0 0 1156 406 1175 5276 3603 3603 1 DACELIER QKKRYSKKDACELIER DACELIERYLNRFSSE K D A E R Y 1 1 0 1 1 0 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 0 1004.4597 Q96EY4;H0Y9X1;D6RA57;D6RE67;D6RC31 Q96EY4 73 80 TMA16 Translation machinery-associated protein 16 yes no 2 0.012377 90.601 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 1 1 1 1 1 28458000 3503900 5072900 3430100 2638000 4432200 9380700 1157 615 1176 5277;5278;5279;5280;5281;5282;5283 3604;3605;3606;3607 3605 4 DAEAAEATAEGALKAEK EEGPAKGKDAEAAEAT EGALKAEKKEGGSGRA K D A E K K 7 0 0 1 0 0 4 1 0 0 1 2 0 0 0 0 1 0 0 0 0 17 1 1673.8108 C9J7T7;C9JE98;C9J239;Q9Y618-5;C9J0Q5;Q9Y618-4;C9JJF6;C9JFD3;Q9Y618-3;Q9Y618;C9JQE8 C9J7T7 432 448 NCOR2 Nuclear receptor corepressor 2 yes no 2;3 0.0032995 75.91 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 5479200 0 2372000 0 0 0 3107200 1158 224 1177 5284;5285;5286;5287 3608;3609;3610 3610 3 DAEAWFNEK QLAEQNRKDAEAWFNE AEAWFNEKSKELTTEI K D A E K S 2 0 1 1 0 0 2 0 0 0 0 1 0 1 0 0 0 1 0 0 0 9 0 1108.4825 P13645;CON__P13645;Q7Z3Y7;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Z0;CON__Q7Z3Z0;Q7Z3Y8;CON__Q7Z3Y8 P13645 335 343 KRT10;KRT28;KRT25;KRT27 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27 yes no 1;2 1.5845E-272 199.46 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 3 2 2 2 287510000 14363000 42137000 164420000 18809000 9440000 38336000 + 1159 298 1178 5288;5289;5290;5291;5292;5293;5294;5295;5296;5297;5298 3611;3612;3613;3614;3615;3616;3617 3613 7 DAEAWFNEKSK QLAEQNRKDAEAWFNE AWFNEKSKELTTEIDN K D A S K E 2 0 1 1 0 0 2 0 0 0 0 2 0 1 0 1 0 1 0 0 0 11 1 1323.6095 P13645;CON__P13645 P13645 335 345 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 0.00078258 98.156 By matching By matching By MS/MS By matching By matching By MS/MS 2 2 1 1 2 36883000 0 8868500 17164000 3767000 1531200 5552200 + 1160 298 1179 5299;5300;5301;5302;5303;5304;5305;5306 3618;3619 3618 2 DAEDALHNLDRK YVQFEDVRDAEDALHN ALHNLDRKWICGRQIE R D A R K W 2 1 1 3 0 0 1 0 1 0 2 1 0 0 0 0 0 0 0 0 0 12 1 1395.6743 O75494-5;Q5JRI1;O75494-4;Q5JRI3;O75494-3;O75494-2;O75494 O75494-5 63 74 SRSF10 Serine/arginine-rich splicing factor 10 yes no 3 0.00092794 78.548 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 16068000 864020 7044300 1568000 676400 1217600 4698000 1161 743 1180 5307;5308;5309;5310;5311;5312 3620;3621;3622;3623;3624;3625;3626 3620 6 DAEEEGGDQAGQNIR EESKDDQKDAEEEGGD DQAGQNIRKDRHYRSA K D A I R K 2 1 1 2 0 2 3 3 0 1 0 0 0 0 0 0 0 0 0 0 0 15 0 1587.6761 Q92620;H3BQT9;H3BV01 Q92620 91 105 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes no 2 0.017521 43.69 By matching By matching By matching By matching By matching By MS/MS 1 1 794050 0 263390 0 0 0 530660 1162 1356 1181 5313;5314 3627 3627 1 DAEEEGGDQAGQNIRK EESKDDQKDAEEEGGD QAGQNIRKDRHYRSAR K D A R K D 2 1 1 2 0 2 3 3 0 1 0 1 0 0 0 0 0 0 0 0 0 16 1 1715.7711 Q92620;H3BQT9;H3BV01 Q92620 91 106 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes no 3 0.0014288 62.287 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 11245000 863510 1826500 1568300 934230 1125300 4927200 1163 1356 1182 5315;5316;5317;5318;5319;5320 3628;3629;3630;3631 3631 4 DAEGGPGAWRLSR VLAEQLRRDAEGGPGA PGAWRLSRAAAGRGPL R D A S R A 2 2 0 1 0 0 1 3 0 0 1 0 0 0 1 1 0 1 0 0 0 13 1 1370.6691 Q96E14 Q96E14 33 45 RMI2 RecQ-mediated genome instability protein 2 yes yes 3 0.037204 42.425 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 5493300 385530 284940 1216800 0 411000 3195000 1164 1378 1183 5321;5322;5323;5324;5325 3632;3633 3633 2 DAEGLAARDVQK SLEKSVTKDAEGLAAR LAARDVQKIIGDYFSD K D A Q K I 3 1 0 2 0 1 1 1 0 0 1 1 0 0 0 0 0 0 0 1 0 12 1 1271.647 Q96HW7;Q96HW7-2;Q96HW7-3 Q96HW7 187 198 INTS4 Integrator complex subunit 4 yes no 2 0.00014614 99.732 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 9113300 2078500 1203500 0 1571600 1473300 2786500 1165 1393 1184 5326;5327;5328;5329;5330;5331 3634;3635;3636;3637;3638;3639;3640 3636 7 DAEGSTCLHLAAK AGALVDPKDAEGSTCL TCLHLAAKKGHYEVVQ K D A A K K 3 0 0 1 1 0 1 1 1 0 2 1 0 0 0 1 1 0 0 0 0 13 0 1371.6453 Q9H9B1-3;Q9H9B1;C9JD67 Q9H9B1-3 836 848 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes no 2 0.0018991 73.082 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 4325100 335370 1458100 491590 0 934780 1105300 1166 1507 1185 5332;5333;5334;5335;5336 3641;3642 3641 2 DAEMNELRTK LQSELQFKDAEMNELR EMNELRTKLQTSERAN K D A T K L 1 1 1 1 0 0 2 0 0 0 1 1 1 0 0 0 1 0 0 0 0 10 1 1205.571 C9IZM8;B5MEB7;Q8WXE1-3;Q8WXE1-2;Q8WXE1;F8WE08 C9IZM8 103 112 ATRIP ATR-interacting protein yes no 3 0.011082 72.2 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1179900 0 93376 0 0 348830 737730 1167 176 1186 5337;5338;5339 3643 3643 1 DAERAINTLNGLR FVNYVTAKDAERAINT INTLNGLRLQSKTIKV K D A L R L 2 2 2 1 0 0 1 1 0 1 2 0 0 0 0 0 1 0 0 0 0 13 1 1441.7637 Q15717 Q15717 73 85 ELAVL1 ELAV-like protein 1 yes yes 3 0.019064 49.356 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 2 1 2 23045000 6447900 2955900 0 903840 0 12737000 1168 1146 1187 5340;5341;5342;5343;5344;5345 3644;3645;3646;3647 3647 4 DAERAINTLNGLRLQSK FVNYVTAKDAERAINT NGLRLQSKTIKVSYAR K D A S K T 2 2 2 1 0 1 1 1 0 1 3 1 0 0 0 1 1 0 0 0 0 17 2 1898.0334 Q15717 Q15717 73 89 ELAVL1 ELAV-like protein 1 yes yes 3 0 220.72 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 2 1 624710000 68457000 261640000 117830000 0 32130000 144640000 1169 1146 1188 5346;5347;5348;5349;5350;5351 3648;3649;3650;3651 3650 4 DAFADAVQR GGGPGIRKDAFADAVQ AFADAVQRARQIAAKI K D A Q R A 3 1 0 2 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 9 0 991.47231 Q92945-2;Q92945;E7EP96 Q92945-2 72 80 KHSRP Far upstream element-binding protein 2 yes no 2 0.0019716 106.68 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2 1 1291800000 177640000 155580000 149740000 73293000 261130000 474400000 1170 1366 1189 5352;5353;5354;5355;5356;5357;5358;5359 3652;3653;3654;3655;3656;3657;3658 3653 7 DAFADAVQRAR GGGPGIRKDAFADAVQ ADAVQRARQIAAKIGG K D A A R Q 4 2 0 2 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 11 1 1218.6105 Q92945-2;Q92945;E7EP96 Q92945-2 72 82 KHSRP Far upstream element-binding protein 2 yes no 2;3 4.737E-13 118.23 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 2 3 4 3 2 622020000 91100000 138480000 136500000 84871000 85495000 85577000 1171 1366 1190 5360;5361;5362;5363;5364;5365;5366;5367;5368;5369;5370;5371;5372;5373;5374;5375;5376 3659;3660;3661;3662;3663;3664;3665;3666;3667;3668;3669 3667 11 DAGLSFKDDMPK YGLPIQVRDAGLSFKD SFKDDMPKSDVNKEYY R D A P K S 1 0 0 3 0 0 0 1 0 0 1 2 1 1 1 1 0 0 0 0 0 12 1 1322.6177 E5RJW4;Q9NW64;E5RHA8;Q9NW64-2;F5GWK3 E5RJW4 91 102 RBM22 Pre-mRNA-splicing factor RBM22 yes no 2 0.0071925 73.219 By MS/MS By matching By matching By matching By matching By matching 1 1169600 1169600 0 0 0 0 0 1172 345 1191 5377 3670 3670 1 DAIPENLPPLTADFAEDKDVCK HCIAEVEKDAIPENLP AEDKDVCKNYQEAKDA K D A C K N 3 0 1 4 1 0 2 0 0 1 2 2 0 1 3 0 1 0 0 1 0 22 1 2457.1734 CON__P02769 CON__P02769 319 340 yes yes 3 1.0607E-91 126.29 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 2 1 2514200000 14801000 0 279370000 13073000 2207000000 0 + 1173 294 1192 5378;5379;5380;5381;5382 3671;3672;3673;3674 3673 4 DAIPENLPPLTADFAEDKDVCKNYQEAK HCIAEVEKDAIPENLP CKNYQEAKDAFLGSFL K D A A K D 4 0 2 4 1 1 3 0 0 1 2 3 0 1 3 0 1 0 1 1 0 28 2 3190.5129 CON__P02769 CON__P02769 319 346 yes yes 4 0.000102 49.851 By matching By matching By matching By matching By MS/MS By matching 1 24242000 0 0 0 0 24242000 0 + 1174 294 1193 5383 3675 3675 1 DAKEIPSATQSPISK QRPKLEKKDAKEIPSA ATQSPISKKRKKKGFL K D A S K K 2 0 0 1 0 1 1 0 0 2 0 2 0 0 2 3 1 0 0 0 0 15 1 1570.8203 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 1073 1087 MYBBP1A Myb-binding protein 1A yes no 3 8.4016E-06 92.952 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 11964000 6090600 544260 0 2874100 1681800 772830 1175 682 1194 5384;5385;5386;5387;5388 3676;3677 3677 2 DAKEQVSPLETTLEK QSLYREIKDAKEQVSP PLETTLEKFQQEKEEL K D A E K F 1 0 0 1 0 1 3 0 0 0 2 2 0 0 1 1 2 0 0 1 0 15 1 1686.8676 Q92878-2;Q92878;Q92878-3 Q92878-2 913 927 RAD50 DNA repair protein RAD50 yes no 2;3 3.8491E-87 141.59 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 2 36175000 13980000 2880000 12329000 2468700 670500 3847000 1176 1362 1195 5389;5390;5391;5392;5393;5394;5395;5396;5397;5398;5399 3678;3679;3680;3681;3682;3683;3684;3685;3686 3686 8 DALAALETPGRPSQQK FKPSFDVKDALAALET PGRPSQQKRKPSTPLS K D A Q K R 3 1 0 1 0 2 1 1 0 0 2 1 0 0 2 1 1 0 0 0 0 16 1 1680.8795 Q92547 Q92547 841 856 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 2;3 1.578E-06 91.616 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 2 1 63341000 13122000 10876000 11786000 6749400 3837800 16969000 1177 1351 1196 5400;5401;5402;5403;5404;5405;5406;5407;5408;5409;5410 3687;3688;3689;3690;3691;3692;3693 3689 5 DALDPRQPGYQPPNPHPGPSSPPAAPASK GLAILLSKDALDPRQP PPAAPASKRSLGEPAA K D A S K R 4 1 1 2 0 2 0 2 1 0 1 1 0 0 10 3 0 0 1 0 0 29 1 2945.442 Q9BUL9 Q9BUL9 142 170 RPP25 Ribonuclease P protein subunit p25 yes yes 4 0.037864 28.215 By matching By matching By matching By matching By matching By MS/MS 1 2192600 0 0 0 0 0 2192600 1178 1450 1197 5411 3694 3694 0 DALLAGLKQDEPGQAGSQK LQDKHCSKDALLAGLK PGQAGSQKSSTKQPTV K D A Q K S 3 0 0 2 0 3 1 3 0 0 3 2 0 0 1 1 0 0 0 0 0 19 1 1924.9854 Q68CP9-3;Q68CP9;F8VWP4;Q68CP9-2;E7ENG3;F8W108;F8WCU9 Q68CP9-3 1694 1712 ARID2 AT-rich interactive domain-containing protein 2 yes no 2;3 5.7197E-38 109.87 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 1 46523000 22681000 4305300 14533000 3044700 1958500 0 1179 1215 1198 5412;5413;5414;5415;5416;5417 3695;3696;3697;3698;3699;3700 3700 6 DAMEQCHNYNAR LLGEQYYKDAMEQCHN QCHNYNARLCAERSVR K D A A R L 2 1 2 1 1 1 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 12 0 1507.5932 Q92785;B4DT58;E9PN04 Q92785 19 30 DPF2 Zinc finger protein ubi-d4 yes no 2;3 9.7763E-28 124.67 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 2 7794800 715100 1074500 1074200 756210 1390700 2784200 1180 1359 1199 5418;5419;5420;5421;5422;5423;5424 3701;3702;3703;3704 3703 4 DANLYISGLPRTMTQK RPSSEVIKDANLYISG LPRTMTQKDVEDMFSR K D A Q K D 1 1 1 1 0 1 0 1 0 1 2 1 1 0 1 1 2 0 1 0 0 16 1 1806.9298 Q15717 Q15717 105 120 ELAVL1 ELAV-like protein 1 yes yes 3 0.0020403 59.884 By matching By MS/MS By matching By matching By matching By matching 1 7331800 0 7331800 0 0 0 0 1181 1146 1200 5425 3705 3705 1 DAPVDHLGTEHCYDSSAPPK IRAMRNKKDAPVDHLG YDSSAPPKSKVKYIKQ K D A P K S 2 0 0 3 1 0 1 1 2 0 1 1 0 0 3 2 1 0 1 1 0 20 0 2194.9589 H3BPD5;P78549;H3BRL9 H3BPD5 87 106 NTHL1 Endonuclease III-like protein 1 yes no 3 0.012668 38.996 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2350900 0 218620 0 0 716440 1415800 1182 636 1201 5426;5427;5428 3706 3706 1 DAPVHGSPTGPGAWTASK KPVLLGLRDAPVHGSP PGAWTASKLGGIPDAL R D A S K L 3 0 0 1 0 0 0 3 1 0 0 1 0 0 3 2 2 1 0 1 0 18 0 1734.8325 Q9BRP1 Q9BRP1 14 31 PDCD2L Programmed cell death protein 2-like yes yes 2;3 0.0014522 77.505 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 2 17687000 0 2323500 0 1697700 6374900 7290500 1183 1442 1202 5429;5430;5431;5432;5433;5434 3707;3708;3709;3710;3711 3710 5 DAQDAEAAMDGAELDGR FVRFHDRRDAQDAEAA DGAELDGRELRVQVAR R D A G R E 5 1 0 4 0 1 2 2 0 0 1 0 1 0 0 0 0 0 0 0 0 17 0 1733.7163 Q9BRL6-2;Q9BRL6 Q9BRL6-2 67 83 SRSF8 Serine/arginine-rich splicing factor 8 yes no 2 0.0020874 65.905 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 4437000 1535300 952910 1948700 0 0 0 1184 1441 1203 5435;5436;5437 3712;3713;3714 3712 3 DAQDAEAAMDGAELDGRELR FVRFHDRRDAQDAEAA ELDGRELRVQVARYGR R D A L R V 5 2 0 4 0 1 3 2 0 0 2 0 1 0 0 0 0 0 0 0 0 20 1 2131.944 Q9BRL6-2;Q9BRL6 Q9BRL6-2 67 86 SRSF8 Serine/arginine-rich splicing factor 8 yes no 3 0.0087584 41.912 By matching By matching By matching By MS/MS By matching By matching 1 3104900 0 0 0 3104900 0 0 1185 1441 1204 5438 3715 3715 1 DAQPSFSAEDIAK CNVKQMSKDAQPSFSA FSAEDIAKIKKFSKTR K D A A K I 3 0 0 2 0 1 1 0 0 1 0 1 0 1 1 2 0 0 0 0 0 13 0 1377.6412 P25205 P25205 271 283 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.0013926 75.764 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2 1 60892000 8243800 5733100 8066700 1807900 21898000 15142000 1186 873 1205 5439;5440;5441;5442;5443;5444;5445 3716;3717;3718;3719;3720 3716 5 DAQPSFSAEDIAKIK CNVKQMSKDAQPSFSA AEDIAKIKKFSKTRSK K D A I K K 3 0 0 2 0 1 1 0 0 2 0 2 0 1 1 2 0 0 0 0 0 15 1 1618.8203 P25205 P25205 271 285 MCM3 DNA replication licensing factor MCM3 yes yes 2;3 2.7416E-20 109.07 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 2 1 1 1 100100000 18086000 31821000 19562000 0 7300200 23327000 1187 873 1206 5446;5447;5448;5449;5450;5451 3721;3722;3723;3724;3725 3724 4 DAQPSFSAEDIAKIKK CNVKQMSKDAQPSFSA EDIAKIKKFSKTRSKD K D A K K F 3 0 0 2 0 1 1 0 0 2 0 3 0 1 1 2 0 0 0 0 0 16 2 1746.9152 P25205 P25205 271 286 MCM3 DNA replication licensing factor MCM3 yes yes 3 2.2709E-26 110.35 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 94395000 36421000 0 33341000 0 24632000 0 1188 873 1207 5452;5453;5454 3726;3727;3728;3729 3726 4 DAQQDLNLDIEK DVHQICDKDAQQDLNL DLNLDIEKITETGAVK K D A E K I 1 0 1 3 0 2 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 12 0 1400.6783 P49454 P49454 1793 1804 CENPF Centromere protein F yes yes 2 0.0017862 77.644 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 3016700 0 1502400 0 0 0 1514300 1189 936 1208 5455;5456 3730;3731 3731 2 DASAQQDSYEFVSPSPPADVSERAK QTQPAIKKDASAQQDS ADVSERAKKASARSGK K D A A K K 4 1 0 3 0 2 2 0 0 0 0 1 0 1 3 5 0 0 1 2 0 25 1 2680.2253 E7EUI3;Q99728 E7EUI3 28 52 BARD1 BRCA1-associated RING domain protein 1 yes no 3 2.0637E-64 109.41 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 15229000 0 4901200 10327000 0 0 0 1190 386 1209 5457;5458 3732;3733;3734 3732 3 DASGQPIFNASAK EDLVVLGKDASGQPIF PIFNASAKHWTNFVIT K D A A K H 3 0 1 1 0 1 0 1 0 1 0 1 0 1 1 2 0 0 0 0 0 13 0 1304.6361 O15226;G3V1N1 O15226 323 335 NKRF NF-kappa-B-repressing factor yes no 2 0.01657 50.659 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 8417600 1015600 196600 1865900 1280200 0 4059300 1191 578 1210 5459;5460;5461;5462;5463 3735;3736 3735 2 DASLVTNEDHQR LRDLLKSKDASLVTNE VTNEDHQRSLLAFDQQ K D A Q R S 1 1 1 2 0 1 1 0 1 0 1 0 0 0 0 1 1 0 0 1 0 12 0 1383.6379 P49454 P49454 771 782 CENPF Centromere protein F yes yes 2 3.0473E-07 102.97 By matching By matching By matching By matching By matching By MS/MS 1 1 1633100 0 0 0 111670 0 1521500 1192 936 1211 5464;5465 3737 3737 1 DASLVVTTSGDHKAK ILDFALSKDASLVVTT TSGDHKAKVFCVQRPD K D A A K V 2 0 0 2 0 0 0 1 1 0 1 2 0 0 0 2 2 0 0 2 0 15 1 1527.7893 C9JG97;Q13685;C9JEH3;H7C0R2 C9JG97 392 406 AAMP Angio-associated migratory cell protein yes no 3 0.0092177 47.622 By matching By matching By matching By matching By MS/MS By matching 1 519720 0 0 0 0 519720 0 1193 241 1212 5466 3738 3738 1 DASRCSEQPSISDIKEK EKADGLSKDASRCSEQ SISDIKEKSKFRMSEL K D A E K S 1 1 0 2 1 1 2 0 0 2 0 2 0 0 1 4 0 0 0 0 0 17 2 1948.916 Q14527;Q14527-2;E7ESN4;F5H3D6 Q14527 356 372 HLTF Helicase-like transcription factor yes no 3;4 0.00040103 86.772 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 3 2 1 2 2 45444000 3343300 11554000 10552000 1721600 4645900 13626000 1194 1107 1213 5467;5468;5469;5470;5471;5472;5473;5474;5475;5476;5477;5478 3739;3740;3741;3742;3743;3744;3745 3742 7 DASSTYSQVENLNR TLRKVNGKDASSTYSQ SQVENLNRELTSRVTA K D A N R E 1 1 2 1 0 1 1 0 0 0 1 0 0 0 0 3 1 0 1 1 0 14 0 1582.7223 Q9UFC0;H7C5S6 Q9UFC0 126 139 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 2 1.2037E-12 102.5 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4519100 0 1168900 617200 0 418330 2314600 1195 1587 1214 5479;5480;5481;5482 3746;3747 3746 2 DAVCSGVTGAANVAK KTVLTGTKDAVCSGVT TGAANVAKGAVQMGVD K D A A K G 4 0 1 1 1 0 0 2 0 0 0 1 0 0 0 1 1 0 0 3 0 15 0 1418.6824 Q96Q06-2;Q96Q06 Q96Q06-2 849 863 PLIN4 Perilipin-4 yes no 2 0.00068273 74.853 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 9562800 995880 1718000 1348900 849880 1370400 3279800 1196 1413 1215 5483;5484;5485;5486;5487;5488 3748;3749;3750;3751 3750 4 DAVEAYQLAQR KVRIRDRKDAVEAYQL EAYQLAQRLQSMRTRR K D A Q R L 3 1 0 1 0 2 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 11 0 1262.6255 Q5VVJ2;Q5VVJ2-2 Q5VVJ2 484 494 MYSM1 Histone H2A deubiquitinase MYSM1 yes no 2 1.317E-29 126.19 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 5629000 0 911410 530670 397330 452420 3337200 1197 1207 1216 5489;5490;5491;5492;5493 3752;3753;3754 3753 3 DAVEDLESVGK GGLGKLGKDAVEDLES EDLESVGKGAVHDVKD K D A G K G 1 0 0 2 0 0 2 1 0 0 1 1 0 0 0 1 0 0 0 2 0 11 0 1160.5561 P81605;P81605-2 P81605 86 96 DCD Dermcidin;Survival-promoting peptide;DCD-1 no no 2 0.0065827 93.345 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 54252000 12801000 28757000 0 2754100 0 9939800 1198 1013;1014 1217 5494;5495;5496;5497 3755;3756;3757;3758 3755 3 DAVEDLESVGKGAVHDVK GGLGKLGKDAVEDLES KGAVHDVKDVLDSVL_ K D A V K D 2 0 0 3 0 0 2 2 1 0 1 2 0 0 0 1 0 0 0 4 0 18 1 1866.9323 P81605 P81605 86 103 DCD Dermcidin;Survival-promoting peptide;DCD-1 yes yes 3 9.6717E-74 127.29 By matching By MS/MS By matching By matching By matching By matching 1 26482000 0 26482000 0 0 0 0 1199 1013 1218 5498 3759 3759 1 DAVEDLESVGKGGEER GGLGKLGKDAVEDLES VGKGGEERLVFGAPVN K D A E R L 1 1 0 2 0 0 4 3 0 0 1 1 0 0 0 1 0 0 0 2 0 16 1 1688.7853 P81605-2 P81605-2 86 101 DCD Dermcidin;Survival-promoting peptide;DCD-1 yes yes 3 0.00025169 76.82 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 10148000 0 3366800 6780800 0 0 0 1200 1014 1219 5499;5500 3760;3761;3762 3760 3 DAVIQDLER DEEIQGTKDAVIQDLE AVIQDLERKLRFKEDL K D A E R K 1 1 0 2 0 1 1 0 0 1 1 0 0 0 0 0 0 0 0 1 0 9 0 1057.5404 Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-5;Q8WX93-4;Q8WX93-2;Q8WX93-9 Q8WX93-3 520 528 PALLD Palladin yes no 2 0.0067401 96.342 By matching By MS/MS By matching By matching By matching By matching 1 2488800 0 2488800 0 0 0 0 1201 1343 1220 5501 3763 3763 1 DAVSTGLTGAVNVAK KSVLTGTKDAVSTGLT TGAVNVAKGTVQTGVD K D A A K G 3 0 1 1 0 0 0 2 0 0 1 1 0 0 0 1 2 0 0 3 0 15 0 1401.7464 Q96Q06-2;Q96Q06 Q96Q06-2 486 500 PLIN4 Perilipin-4 yes no 2 0.0026215 62.861 By matching By MS/MS By matching By matching By matching By matching 1 1 7889600 0 7315000 0 574620 0 0 1202 1413 1221 5502;5503 3764 3764 1 DAVSTGLTGAVNVAR KAVLTGTKDAVSTGLT TGAVNVARGSIQTGVD K D A A R G 3 1 1 1 0 0 0 2 0 0 1 0 0 0 0 1 2 0 0 3 0 15 0 1429.7525 Q96Q06-2;Q96Q06 Q96Q06-2 222 236 PLIN4 Perilipin-4 yes no 2 2.4458E-05 76.82 By matching By MS/MS By matching By matching By matching By matching 1 7952600 0 7952600 0 0 0 0 1203 1413 1222 5504 3765 3765 0 DAVTTGVTGAVNVAK KTVLSGAKDAVTTGVT TGAVNVAKGTVQTGVD K D A A K G 3 0 1 1 0 0 0 2 0 0 0 1 0 0 0 0 3 0 0 4 0 15 0 1401.7464 Q96Q06-2;Q96Q06 Q96Q06-2 1014 1028 PLIN4 Perilipin-4 yes no 2 6.6622E-21 110.55 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 2 1 1 2 34257000 9101100 3203800 10476000 1532000 3859900 6083800 1204 1413 1223 5505;5506;5507;5508;5509;5510;5511;5512 3766;3767;3768;3769;3770;3771 3767 6 DAYLQSLAK ________________ AYLQSLAKKICSHSAP K D A A K K 2 0 0 1 0 1 0 0 0 0 2 1 0 0 0 1 0 0 1 0 0 9 0 1007.5288 O75683 O75683 8 16 SURF6 Surfeit locus protein 6 yes yes 2 0.011126 83.647 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 13344000 2267800 0 2288400 2406700 2724500 3656600 1205 749 1224 5513;5514;5515;5516;5517 3772;3773 3772 2 DAYSSFGSR GWSSSKDKDAYSSFGS AYSSFGSRSDSRGKSS K D A S R S 1 1 0 1 0 0 0 1 0 0 0 0 0 1 0 3 0 0 1 0 0 9 0 988.42502 O00571;O00571-2;B4DLU5;B4E3C4;B4DXX7;O15523;B4DLA0;C9J081;B4E132;C9J8G5 O00571 67 75 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2 0.0065883 91.265 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 27403000 1095900 6129300 0 0 8505800 11672000 1206 693 1225 5518;5519;5520;5521 3774;3775;3776;3777 3776 4 DAYSSFGSRSDSR GWSSSKDKDAYSSFGS FGSRSDSRGKSSFFSD K D A S R G 1 2 0 2 0 0 0 1 0 0 0 0 0 1 0 5 0 0 1 0 0 13 1 1433.6171 O00571;O00571-2;B4DLU5;B4E3C4;B4DLA0 O00571 67 79 DDX3X ATP-dependent RNA helicase DDX3X yes no 3 0.035566 42.976 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 4828200 0 0 1016500 756640 1028000 2027000 1207 693 1226 5522;5523;5524;5525 3778 3778 1 DAYSSFGSRSDSRGK GWSSSKDKDAYSSFGS SRSDSRGKSSFFSDRG K D A G K S 1 2 0 2 0 0 0 2 0 0 0 1 0 1 0 5 0 0 1 0 0 15 2 1618.7336 O00571;O00571-2;B4DLU5;B4E3C4;B4DLA0 O00571 67 81 DDX3X ATP-dependent RNA helicase DDX3X yes no 3 0.0077185 59.227 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 51133000 5076500 8646000 11559000 9447100 5902700 10503000 1208 693 1227 5526;5527;5528;5529;5530;5531 3779;3780 3779 2 DCASRVNNASYCPHCGEESSK SISHRFHKDCASRVNN HCGEESSKAKEVTIAK K D C S K A 2 1 2 1 3 0 2 1 1 0 0 1 0 0 1 4 0 0 1 1 0 21 1 2426.9638 Q9H9B1-3;Q9H9B1;Q9H9B1-4;C9JD67;Q9H9B1-2 Q9H9B1-3 616 636 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes no 4 0.0053808 45.069 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 14690000 0 2091700 6321500 2397700 3879000 0 1209 1507 1228 5532;5533;5534;5535 3781 3781 1 DCASRVNNASYCPHCGEESSKAK SISHRFHKDCASRVNN GEESSKAKEVTIAKAD K D C A K E 3 1 2 1 3 0 2 1 1 0 0 2 0 0 1 4 0 0 1 1 0 23 2 2626.0959 Q9H9B1-3;Q9H9B1;Q9H9B1-4;C9JD67;Q9H9B1-2 Q9H9B1-3 616 638 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes no 4 0.0041446 44.743 By MS/MS By matching By MS/MS By matching By matching By matching 2 1 1 3821400 1403200 0 1767600 0 650510 0 1210 1507 1229 5536;5537;5538;5539 3782;3783 3782 2 DCDLQEDACYNCGR GESGHLAKDCDLQEDA DACYNCGRGGHIAKDC K D C G R G 1 1 1 3 3 1 1 1 0 0 1 0 0 0 0 0 0 0 1 0 0 14 0 1774.6345 B4DP17;P62633-3;P62633-2;P62633 B4DP17 49 62 CNBP Cellular nucleic acid-binding protein yes no 2 0.001987 66.004 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 6597600 0 985860 832670 855090 770800 3153200 1211 112 1230 5540;5541;5542;5543;5544 3784 3784 1 DCDLQEDACYNCGRGGHIAK GESGHLAKDCDLQEDA GRGGHIAKDCKEPKRE K D C A K D 2 1 1 3 3 1 1 3 1 1 1 1 0 0 0 0 0 0 1 0 0 20 1 2337.9525 B4DP17;P62633-3;P62633-2;P62633 B4DP17 49 68 CNBP Cellular nucleic acid-binding protein yes no 4 0.00098401 54.412 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 65759000 0 0 17621000 13280000 16427000 18430000 1212 112 1231 5545;5546;5547;5548 3785 3785 1 DCDLQEDEACYNCGRGGHIAK GESGHLAKDCDLQEDE GRGGHIAKDCKEPKRE K D C A K D 2 1 1 3 3 1 2 3 1 1 1 1 0 0 0 0 0 0 1 0 0 21 1 2466.9951 P62633-4 P62633-4 66 86 CNBP Cellular nucleic acid-binding protein yes yes 3;4 3.5935E-09 83.792 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 2 2 33613000 6871800 5042000 8467600 2414500 3063400 7753900 1213 992 1232 5549;5550;5551;5552;5553;5554;5555;5556;5557;5558;5559 3786;3787;3788;3789;3790;3791;3792 3787 7 DCELENQEAHEQDGNDELK VEDDAFIKDCELENQE QDGNDELKDSEEFGEN K D C L K D 1 0 2 3 1 2 5 1 1 0 2 1 0 0 0 0 0 0 0 0 0 19 0 2271.9186 Q9NWH9;H7BXE3;H0YL55;H0YKU6 Q9NWH9 106 124 SLTM SAFB-like transcription modulator yes no 3 0.0092103 40.798 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 19468000 0 4949000 2170700 2325600 5192900 4829500 1214 1554 1233 5560;5561;5562;5563;5564 3793;3794;3795;3796 3794 4 DCHCLGDVLIENTKESK RLMPNSQKDCHCLGDV IENTKESKSQSEDLGR K D C S K S 0 0 1 2 2 0 2 1 1 1 2 2 0 0 0 1 1 0 0 1 0 17 1 2016.9245 Q69YH5;E9PEI0 Q69YH5 789 805 CDCA2 Cell division cycle-associated protein 2 yes no 3 0.0011443 62.525 By matching By MS/MS By matching By matching By matching By matching 1 1442700 0 1442700 0 0 0 0 1215 1219 1234 5565 3797 3797 0 DCLETTKNQGEYCPK SGTKCKYKDCLETTKN NQGEYCPKHSEVKAAD K D C P K H 0 0 1 1 2 1 2 1 0 0 1 2 0 0 1 0 2 0 1 0 0 15 1 1841.7924 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 1553 1567 SETX Probable helicase senataxin yes no 3 0.0079291 49.333 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 10073000 674000 1472400 3060500 1063800 1210500 2592200 1216 1250 1235 5566;5567;5568;5569;5570;5571 3798;3799 3799 2 DCNPEVSESFKVK ASKQNIRRDCNPEVSE VSESFKVKDEVFVPFT R D C V K D 0 0 1 1 1 0 2 0 0 0 0 2 0 1 1 2 0 0 0 2 0 13 1 1537.7083 Q6ZRS4-3;Q6ZRS4;F5H2J8;F5H3V5 Q6ZRS4-3 176 188 CCDC129 Coiled-coil domain-containing protein 129 yes no 3 0.0027791 74.237 By matching By matching By matching By matching By matching By MS/MS 1 1073800 0 0 0 0 0 1073800 1217 513 1236 5572 3800 3800 0 DCQELASISVGSGSRPSSDLQAR LNTVASPKDCQELASI PSSDLQARLGELAGES K D C A R L 2 2 0 2 1 2 1 2 0 1 2 0 0 0 1 6 0 0 0 1 0 23 1 2419.1398 Q96T58 Q96T58 1065 1087 SPEN Msx2-interacting protein yes yes 3 0.0022099 50.226 By matching By matching By matching By matching By matching By MS/MS 1 3599100 0 0 0 0 0 3599100 1218 1422 1237 5573 3801 3801 1 DCRYALYDATYETK FVKMLPDKDCRYALYD YDATYETKESKKEDLV K D C T K E 2 1 0 2 1 0 1 0 0 0 1 1 0 0 0 0 2 0 3 0 0 14 1 1767.7774 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;G3V5P4;Q9Y281 E9PP50 79 92 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 2;3 0.0011276 75.911 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 2 1 1 1 2 21986000 3321000 4819800 7002200 719090 940110 5183300 1219 461 1238 5574;5575;5576;5577;5578;5579;5580;5581 3802;3803;3804;3805 3805 4 DCRYALYDATYETKESK FVKMLPDKDCRYALYD TYETKESKKEDLVFIF K D C S K K 2 1 0 2 1 0 2 0 0 0 1 2 0 0 0 1 2 0 3 0 0 17 2 2111.947 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;G3V5P4;Q9Y281 E9PP50 79 95 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 3 0.029536 43.752 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 2847700 530940 282980 1229700 0 0 804040 1220 461 1239 5582;5583;5584;5585 3806 3806 1 DCSRLTNGPSNGSSSR EQSEATSKDCSRLTNG PSNGSSSRQRTSGSGF K D C S R Q 0 2 2 1 1 0 0 2 0 0 1 0 0 0 1 5 1 0 0 0 0 16 1 1693.7438 Q15007 Q15007 269 284 WTAP Pre-mRNA-splicing regulator WTAP yes yes 3 0.030409 58.461 By matching By matching By matching By matching By matching By MS/MS 1 1 1000400 0 0 333970 0 0 666460 1221 1125 1240 5586;5587 3807 3807 0 DCVSPSEYTAACSR ALEKAYIKDCVSPSEY EYTAACSRLLVQYKAA K D C S R L 2 1 0 1 2 0 1 0 0 0 0 0 0 0 1 3 1 0 1 1 0 14 0 1601.645 E9PQR7;Q9UK41;Q9UK41-2 E9PQR7 59 72 VPS28 Vacuolar protein sorting-associated protein 28 homolog yes no 2 0.0018707 66.708 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 4785400 0 855590 485980 459570 1427900 1556400 1222 466 1241 5588;5589;5590;5591;5592 3808;3809;3810;3811 3811 4 DDAEVERLTCEEEEEK ELPSWIIKDDAEVERL TCEEEEEKMFGRGSRH K D D E K M 1 1 0 2 1 0 7 0 0 0 1 1 0 0 0 0 1 0 0 1 0 16 1 1979.8266 P51531-2;P51531;P51532-5;P51532-2;P51532-3;P51532-4;P51532;Q9HBD4;F5H0X5;H0YGM3 P51532-5 1317 1332 SMARCA2;SMARCA4 Probable global transcription activator SNF2L2;Transcription activator BRG1 no no 3 0.0033886 66.059 By matching By MS/MS By matching By matching By matching By matching 1 1 1 8875600 0 3038900 1479500 0 0 4357100 1223 952;951 1242 5593;5594;5595 3812 3812 1 DDAQSVETLGKPK NKLEDELKDDAQSVET VETLGKPKAKRIRTSK K D D P K A 1 0 0 2 0 1 1 1 0 0 1 2 0 0 1 1 1 0 0 1 0 13 1 1386.6991 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 2177 2189 AHCTF1 Protein ELYS yes no 2 0.0057852 69.314 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 2 1 2700800 0 741190 0 0 853920 1105700 1224 1345 1243 5596;5597;5598;5599 3813;3814;3815 3814 3 DDAQSVETLGKPKAK NKLEDELKDDAQSVET TLGKPKAKRIRTSKTK K D D A K R 2 0 0 2 0 1 1 1 0 0 1 3 0 0 1 1 1 0 0 1 0 15 2 1585.8312 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 2177 2191 AHCTF1 Protein ELYS yes no 3 0.0023578 75.911 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 10942000 1449100 2375300 1997300 845590 2104400 2170800 1225 1345 1244 5600;5601;5602;5603;5604;5605 3816;3817;3818;3819;3820 3819 5 DDCVNTVTGISSGTDGFRSENDTNWDPQK DGEDLLVKDDCVNTVT DTNWDPQKEFIQFLMT K D D Q K E 0 1 3 5 1 1 1 3 0 1 0 1 0 1 1 3 4 1 0 2 0 29 1 3214.3745 Q9H582-2;Q9H582;F5H7T9 Q9H582-2 235 263 ZNF644 Zinc finger protein 644 yes no 3 0.0053864 33.663 By matching By MS/MS By matching By matching By matching By matching 1 7547600 0 7547600 0 0 0 0 1226 1492 1245 5606 3821 3821 1 DDDEPGPWTK VWRYLLRRDDDEPGPW DEPGPWTKEGKDRIKK R D D T K E 0 0 0 3 0 0 1 1 0 0 0 1 0 0 2 0 1 1 0 0 0 10 0 1158.4829 B5ME40;F5GXG0;Q96T88 B5ME40 198 207 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 2 0.012231 70.412 By matching By MS/MS By matching By matching By matching By matching 1 1 1701800 579800 1122000 0 0 0 0 1227 175 1246 5607;5608 3822 3822 1 DDEVQVVRGHYK VRSMPIRKDDEVQVVR QVVRGHYKGQQIGKVV K D D Y K G 0 1 0 2 0 1 1 1 1 0 0 1 0 0 0 0 0 0 1 3 0 12 1 1443.7106 E5RIT6;Q9UNX3;P61254 E5RIT6 52 63 RPL26L1;RPL26 60S ribosomal protein L26-like 1;60S ribosomal protein L26 yes no 3 0.0067285 83.081 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 8138100 2115900 0 1493000 1427200 3102000 0 1228 343 1247 5609;5610;5611;5612 3823;3824;3825 3825 2 DDGGIIICEAQNQALPSGHSK VRFRVDRKDDGGIIIC ALPSGHSKQTQYVLDV K D D S K Q 2 0 1 2 1 2 1 3 1 3 1 1 0 0 1 2 0 0 0 0 0 21 0 2209.0433 Q8NFZ8 Q8NFZ8 192 212 CADM4 Cell adhesion molecule 4 yes yes 3 0.0064213 42.226 By matching By matching By MS/MS By matching By matching By matching 1 1 63556000 0 0 57943000 0 5612800 0 1229 1328 1248 5613;5614 3826 3826 1 DDGVFKAPAPPSKVIK SSKEPNQKDDGVFKAP APPSKVIKTVTIPTQP K D D I K T 2 0 0 2 0 0 0 1 0 1 0 3 0 1 3 1 0 0 0 2 0 16 2 1667.9247 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 592 607 WAPAL Wings apart-like protein homolog yes no 3 3.7778E-10 95.755 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 10481000 10481000 0 0 0 0 0 1230 1253 1249 5615;5616 3827;3828 3827 2 DDINLLPSK RYHLRSKKDDINLLPS DINLLPSKSSVTKICR K D D S K S 0 0 1 2 0 0 0 0 0 1 2 1 0 0 1 1 0 0 0 0 0 9 0 1013.5393 Q9ULW0 Q9ULW0 349 357 TPX2 Targeting protein for Xklp2 yes yes 2 4.8373E-05 112.85 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 2 1 1 1 62341000 12706000 8053900 24026000 4782200 2345000 10429000 1231 1611 1250 5617;5618;5619;5620;5621;5622;5623 3829;3830;3831;3832 3829 4 DDINLLPSKSSVTK RYHLRSKKDDINLLPS PSKSSVTKICRDPQTP K D D T K I 0 0 1 2 0 0 0 0 0 1 2 2 0 0 1 3 1 0 0 1 0 14 1 1515.8144 Q9ULW0 Q9ULW0 349 362 TPX2 Targeting protein for Xklp2 yes yes 3 0.004894 57.034 By matching By matching By MS/MS By matching By matching By matching 1 1 7128600 0 0 5469200 1659400 0 0 1232 1611 1251 5624;5625 3833 3833 1 DDIPEEDKGNVK AERETKKKDDIPEEDK EEDKGNVKQCEINYVK K D D V K Q 0 0 1 3 0 0 2 1 0 1 0 2 0 0 1 0 0 0 0 1 0 12 1 1357.6361 Q14331;E9PLY7;Q9BZ01 Q14331 192 203 FRG1;FRG1B Protein FRG1;Protein FRG1B yes no 3 0.008017 61.213 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 4819700 0 1262600 0 0 1044700 2512400 1233 1106 1252 5626;5627;5628 3834;3835 3834 2 DDIRLLPSALGVKK WGDRMPDKDDIRLLPS PSALGVKKRKRGPKKQ K D D K K R 1 1 0 2 0 0 0 1 0 1 3 2 0 0 1 1 0 0 0 1 0 14 2 1523.9035 Q12873;E9PG89;Q12873-2 Q12873 36 49 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 3 4.628E-29 113.53 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 40030000 0 13599000 0 0 0 26431000 1234 430 1253 5629;5630 3836;3837 3837 2 DDMDFAGNVKK DNCFSSGKDDMDFAGN DFAGNVKKRTKGAKDN K D D K K R 1 0 1 3 0 0 0 1 0 0 0 2 1 1 0 0 0 0 0 1 0 11 1 1238.5601 Q03701;F5H3Y6 Q03701 862 872 CEBPZ CCAAT/enhancer-binding protein zeta yes no 2;3 0.0046838 80.014 By matching By matching By MS/MS By matching By matching By MS/MS 1 2 1 1 2 8353700 914930 1896000 682260 0 1428800 3431700 1235 1037 1254 5631;5632;5633;5634;5635;5636;5637 3838;3839;3840 3840 3 DDPDGKQEAKPQQAAGMLSPK VSSTLAAKDDPDGKQE AAGMLSPKTGGKEAAS K D D P K T 3 0 0 3 0 3 1 2 0 0 1 3 1 0 3 1 0 0 0 0 0 21 2 2210.0637 Q13428-7;E7ETY2;Q13428-6;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 1240 1260 TCOF1 Treacle protein no no 3;4 0.00010087 75.224 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 2 1 3 2 38535000 3614200 2795600 4750300 1715800 18704000 6954500 1236 1082;383 1255 5638;5639;5640;5641;5642;5643;5644;5645;5646;5647 3841;3842;3843;3844;3845;3846;3847 3845 7 DDPHACYSTVFDK TLEECCAKDDPHACYS CYSTVFDKLKHLVDEP K D D D K L 1 0 0 3 1 0 0 0 1 0 0 1 0 1 1 1 1 0 1 1 0 13 0 1553.6457 CON__P02769 CON__P02769 387 399 yes yes 2 0.0022316 70.373 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 26243000 3081200 6718500 1902100 2442200 1199500 10900000 + 1237 294 1256 5648;5649;5650;5651;5652;5653 3848;3849;3850 3849 3 DDPHACYSTVFDKLK TLEECCAKDDPHACYS STVFDKLKHLVDEPQN K D D L K H 1 0 0 3 1 0 0 0 1 0 1 2 0 1 1 1 1 0 1 1 0 15 1 1794.8247 CON__P02769 CON__P02769 387 401 yes yes 3 1.8939E-125 154.13 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 455690000 31462000 177570000 0 46430000 56246000 143990000 + 1238 294 1257 5654;5655;5656;5657;5658 3851;3852;3853;3854;3855 3854 5 DDPSKPVHLTAFLGYK GKVKSFPKDDPSKPVH LTAFLGYKAGMTHIVR K D D Y K A 1 0 0 2 0 0 0 1 1 0 2 2 0 1 2 1 1 0 1 1 0 16 1 1786.9254 P39023;H7C422;H7C3M2;F8WCR1 P39023 35 50 RPL3 60S ribosomal protein L3 yes no 3 0.0044039 51.466 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 65819000 0 29718000 0 36101000 0 0 1239 905 1258 5659;5660 3856;3857 3856 2 DDQLLDDGK PDEQRLYKDDQLLDDG DQLLDDGKTLGECGFT K D D G K T 0 0 0 4 0 1 0 1 0 0 2 1 0 0 0 0 0 0 0 0 0 9 0 1017.4615 B8ZZU8;Q15370;B7WPD3;I3L0M9 B8ZZU8 42 50 TCEB2 Transcription elongation factor B polypeptide 2 yes no 2 0.013763 79.148 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 5299600 302750 1777600 1899200 0 0 1320000 1240 179 1259 5661;5662;5663;5664 3858;3859;3860 3858 3 DDQNPHSSNICNISCDK INNKIWCKDDQNPHSS ICNISCDKFLDDDLTD K D D D K F 0 0 3 3 2 1 0 0 1 2 0 1 0 0 1 3 0 0 0 0 0 17 0 2002.8109 CON__P00711 CON__P00711 63 79 yes yes 3 0.0013205 74.732 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 5593000 0 1863000 706840 754530 885500 1383000 + 1241 283 1260 5665;5666;5667;5668;5669 3861 3861 1 DDRAESQASSLGQK AKTEGLMKDDRAESQA QASSLGQKVGESSEQV K D D Q K V 2 1 0 2 0 2 1 1 0 0 1 1 0 0 0 3 0 0 0 0 0 14 1 1490.6961 F5H4I8;E9PCM7;F5H2R1;P37275;Q2KJ05;F5H8J0;F5H838;Q5VZ84;G3V1R3 F5H4I8 1028 1041 ZEB1 Zinc finger E-box-binding homeobox 1 yes no 3 0.0013178 79.875 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 2 1 11172000 1484000 0 2297600 1710300 2882700 2797300 1242 415 1261 5670;5671;5672;5673;5674;5675 3862;3863;3864 3862 3 DDTDPGQLKGLSAHTHVELPYYSK SQWEKLQKDDTDPGQL VELPYYSKFILIAAYL K D D S K F 1 0 0 3 0 1 1 2 2 0 3 2 0 0 2 2 2 0 2 1 0 24 1 2670.2926 O43913;B4DXT8 O43913 284 307 ORC5 Origin recognition complex subunit 5 yes no 4 5.5914E-08 76.807 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 42086000 14243000 0 0 0 0 27842000 1243 724 1262 5676;5677 3865;3866 3866 0 DDVAPESGDTTVKKPESK KTASVLSKDDVAPESG TVKKPESKKEQTPEHG K D D S K K 1 0 0 3 0 0 2 1 0 0 0 3 0 0 2 2 2 0 0 2 0 18 2 1901.9218 O76021;B4DJ58 O76021 319 336 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 3;4 0.0026483 69.188 By matching By matching By matching By MS/MS By MS/MS By matching 2 2 2 2 2 55716000 0 7842000 9294500 9141300 20903000 8535800 1244 753 1263 5678;5679;5680;5681;5682;5683;5684;5685;5686;5687 3867;3868;3869;3870 3869 4 DEAEDLLGRGSR EEEEEEEKDEAEDLLG DLLGRGSRAALLTERT K D E S R A 1 2 0 2 0 0 2 2 0 0 2 0 0 0 0 1 0 0 0 0 0 12 1 1316.6321 Q9Y5B9 Q9Y5B9 445 456 SUPT16H FACT complex subunit SPT16 yes yes 3 0.037562 45.433 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 10815000 1088100 2630800 615440 0 1397900 5083000 1245 1653 1264 5688;5689;5690;5691;5692 3871 3871 1 DEATDGGGDNKEGEDSSVIHYDDK FGTEELFKDEATDGGG SVIHYDDKAIERLLDR K D E D K A 1 0 1 6 0 0 3 4 1 1 0 2 0 0 0 2 1 0 1 1 0 24 1 2552.0423 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1203 1226 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3;4 1.0823E-08 72.99 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 2 33509000 0 7765800 8553400 0 0 17190000 1246 486 1265 5693;5694;5695;5696;5697;5698 3872;3873;3874;3875;3876;3877 3877 6 DECNVVEVVAR LCLTEGAKDECNVVEV NVVEVVARNHDHQEIA K D E A R N 1 1 1 1 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 4 0 11 0 1288.6082 O75607 O75607 77 87 NPM3 Nucleoplasmin-3 yes yes 2 2.7414E-05 103.43 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2 1 8212400 2547600 2104200 0 845970 0 2714600 1247 747 1266 5699;5700;5701;5702;5703 3878;3879 3878 2 DEDVEEEDEDAEGK EEESESEKDEDVEEED EDEDAEGKDEENGEDR K D E G K D 1 0 0 4 0 0 6 1 0 0 0 1 0 0 0 0 0 0 0 1 0 14 0 1607.5958 Q15061 Q15061 633 646 WDR43 WD repeat-containing protein 43 yes yes 2 9.1785E-07 90.759 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1292300 0 434630 0 0 441220 416490 1248 1130 1267 5704;5705;5706 3880;3881 3881 1 DEEFAGSSPQSSK KAKKSIDKDEEFAGSS GSSPQSSKSTVVKSLI K D E S K S 1 0 0 1 0 1 2 1 0 0 0 1 0 1 1 4 0 0 0 0 0 13 0 1367.5841 Q9Y2M0-2;Q9Y2M0;H3BQ24 Q9Y2M0-2 173 185 FAN1 Fanconi-associated nuclease 1 yes no 2 0.022544 64.224 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 3854600 0 610990 818240 490040 942650 992680 1249 1634 1268 5707;5708;5709;5710;5711 3882 3882 0 DEEQAALGQK DTCSVGKKDEEQAALG EQAALGQKRKRKSPRE K D E Q K R 2 0 0 1 0 2 2 1 0 0 1 1 0 0 0 0 0 0 0 0 0 10 0 1087.5146 Q1ED39;H3BPL4 Q1ED39 190 199 KNOP1 Lysine-rich nucleolar protein 1 yes no 2 0.012631 70.056 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 2581400 743930 0 1324000 0 513430 0 1250 1157 1269 5712;5713;5714 3883;3884 3883 2 DEIIKNVPLKK KVQKHDGKDEIIKNVP IKNVPLKKMVERIRKF K D E K K M 0 0 1 1 0 0 1 0 0 2 1 3 0 0 1 0 0 0 0 1 0 11 2 1295.7813 Q7L576;E7EQ04;E7EVJ5;Q96F07-2;E7EVF4;Q7L576-3;Q7L576-2;F5H583;Q96F07;E7EWA4;E7EW33;H7C229 Q7L576 1193 1203 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 3 0.011999 80.24 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 6448900 910610 1452800 0 994500 0 3091000 1251 359 1270 5715;5716;5717;5718 3885;3886;3887 3887 3 DEILPTTPISEQK HVSIVEPKDEILPTTP TTPISEQKGGKPEPPA K D E Q K G 0 0 0 1 0 1 2 0 0 2 1 1 0 0 2 1 2 0 0 0 0 13 0 1469.7613 E9PPU1;H0YEU2;E9PL09;P23396;E9PSF4 E9PPU1 130 142 RPS3 40S ribosomal protein S3 yes no 2 0.00059379 92.781 By matching By MS/MS By matching By matching By matching By matching 1 13670000 0 13670000 0 0 0 0 1252 457 1271 5719 3888 3888 1 DEISVDSLDFNKK CASGKRKKDEISVDSL DSLDFNKKILHTAWHP K D E K K I 0 0 1 3 0 0 1 0 0 1 1 2 0 1 0 2 0 0 0 1 0 13 1 1508.7359 P63151;P63151-2;E5RFR9;A8MZB4;Q66LE6 P63151 406 418 PPP2R2A;PPP2R2D Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform yes no 2;3 1.2386E-23 117.27 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 28561000 15624000 4961600 0 2890500 0 5084700 1253 1003 1272 5720;5721;5722;5723 3889;3890;3891 3890 3 DEKFKTTVPNAESK FKKEEKAKDEKFKTTV TVPNAESKSTQERERE K D E S K S 1 0 1 1 0 0 2 0 0 0 0 3 0 1 1 1 2 0 0 1 0 14 2 1592.8046 Q8NI27;Q8NI27-2;H7C477;H0Y7U4 Q8NI27 1339 1352 THOC2 THO complex subunit 2 yes no 3 0.0095679 60.937 By MS/MS By matching By MS/MS By matching By matching By MS/MS 2 1 1 1 1 1 19559000 5416900 2153700 5137900 2563700 2438400 1848700 1254 1330 1273 5724;5725;5726;5727;5728;5729;5730 3892;3893;3894;3895 3892 4 DELCVVCGDK YIPSYLDKDELCVVCG LCVVCGDKATGYHYRC K D E D K A 0 0 0 2 2 0 1 1 0 0 1 1 0 0 0 0 0 0 0 2 0 10 0 1193.5057 P10828;C9JJM3;C9JNQ4;P10828-2 P10828 104 113 THRB Thyroid hormone receptor beta yes no 2 0.039779 74.841 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 1255 822 1274 5731 3896 3896 1 DELCVVCGDKATGYHYR YIPSYLDKDELCVVCG KATGYHYRCITCEGCK K D E Y R C 1 1 0 2 2 0 1 2 1 0 1 1 0 0 0 0 1 0 2 2 0 17 1 2041.8986 P10828;C9JNQ4;P10828-2 P10828 104 120 THRB Thyroid hormone receptor beta yes no 4 0.0075697 45.452 By matching By matching By matching By matching By matching By MS/MS 1 1 2793000 0 0 969790 0 0 1823200 1256 822 1275 5732;5733 3897;3898 3898 2 DELERVAK NSYAIKKKDELERVAK DELERVAKSNR_____ K D E A K S 1 1 0 1 0 0 2 0 0 0 1 1 0 0 0 0 0 0 0 1 0 8 1 958.50836 P46782 P46782 194 201 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 0.037375 88.819 By matching By matching By matching By MS/MS By matching By matching 1 1 2587700 0 0 0 740140 1847600 0 1257 927 1276 5734;5735 3899 3899 1 DELLGEKPEVK KDEERAVKDELLGEKP LGEKPEVKQKWASRLL K D E V K Q 0 0 0 1 0 0 3 1 0 0 2 2 0 0 1 0 0 0 0 1 0 11 1 1255.666 P08651-4;P08651-5;P08651-3;P08651-2;P08651;F8W9H9 P08651-4 50 60 NFIC Nuclear factor 1 C-type yes no 2;3 0.0012308 92.611 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 36187000 3629100 6583500 4110600 2772600 3020100 16071000 1258 563 1277 5736;5737;5738;5739;5740;5741;5742;5743;5744;5745;5746;5747 3900;3901;3902;3903;3904;3905;3906 3902 7 DELLGEKPEVKQK KDEERAVKDELLGEKP EKPEVKQKWASRLLAK K D E Q K W 0 0 0 1 0 1 3 1 0 0 2 3 0 0 1 0 0 0 0 1 0 13 2 1511.8195 P08651-4;P08651-5;P08651-3;P08651-2;P08651;F8W9H9 P08651-4 50 62 NFIC Nuclear factor 1 C-type yes no 2;3 0 186.16 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 3 1 1 1 2 1 237960000 37805000 37862000 34345000 21349000 42632000 63972000 1259 563 1278 5748;5749;5750;5751;5752;5753;5754;5755;5756 3907;3908;3909;3910;3911;3912 3910 6 DELLSEKPEIK KDEERAVKDELLSEKP LSEKPEIKQKWASRLL K D E I K Q 0 0 0 1 0 0 3 0 0 1 2 2 0 0 1 1 0 0 0 0 0 11 1 1299.6922 O00712-2;Q5W0Y9;O00712;H7BYE8;Q5VW27;Q5VW29;Q5VW30;Q5VW26 O00712-2 59 69 NFIB Nuclear factor 1 B-type;Nuclear factor 1 yes no 2;3 0.00054357 95.483 By matching By matching By matching By matching By matching By MS/MS 1 2 1 2 5797800 441960 1486100 441890 0 0 3427900 1260 658 1279 5757;5758;5759;5760;5761;5762 3913;3914 3913 2 DELLSEKPEIKQK KDEERAVKDELLSEKP EKPEIKQKWASRLLAK K D E Q K W 0 0 0 1 0 1 3 0 0 1 2 3 0 0 1 1 0 0 0 0 0 13 2 1555.8457 O00712-2;Q5W0Y9;O00712;H7BYE8;Q5VW27;Q5VW29;Q5VW30;Q5VW26 O00712-2 59 71 NFIB Nuclear factor 1 B-type;Nuclear factor 1 yes no 2;3 0.0054584 73.881 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 83784000 9172100 13954000 11771000 10926000 15397000 22562000 1261 658 1280 5763;5764;5765;5766;5767;5768;5769 3915;3916;3917 3915 1 DELLSEKPEVK KEEERAVKDELLSEKP LSEKPEVKQKWASRLL K D E V K Q 0 0 0 1 0 0 3 0 0 0 2 2 0 0 1 1 0 0 0 1 0 11 1 1285.6765 Q12857-2;B1AKN5;F5H0R0;Q12857;B1AKN8;F8W8W3;B1AKN6;B1AKN7 Q12857-2 58 68 NFIA Nuclear factor 1 A-type yes no 2;3 9.0519E-20 122.18 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 2 2 2 2 21076000 1285300 1834500 1668900 2386100 3196700 10705000 1262 1062 1281 5770;5771;5772;5773;5774;5775;5776;5777;5778;5779 3918;3919;3920;3921;3922;3923 3920 6 DELLSEKPEVKQK KEEERAVKDELLSEKP EKPEVKQKWASRLLAK K D E Q K W 0 0 0 1 0 1 3 0 0 0 2 3 0 0 1 1 0 0 0 1 0 13 2 1541.8301 Q12857-2;B1AKN5;F5H0R0;Q12857;B1AKN8;F8W8W3;B1AKN6;B1AKN7 Q12857-2 58 70 NFIA Nuclear factor 1 A-type yes no 3 7.0495E-46 125.36 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 137450000 27826000 24427000 16192000 17529000 20836000 30637000 1263 1062 1282 5780;5781;5782;5783;5784;5785;5786 3924;3925;3926;3927;3928;3929 3929 6 DELTDLDQSNVTEETPEGEEHHPVADTENK SHNWGTVKDELTDLDQ PVADTENKENEVEEVK K D E N K E 1 0 2 4 0 1 7 1 2 0 2 1 0 0 2 1 4 0 0 2 0 30 0 3377.4655 Q8NC51-3;Q8NC51-4 Q8NC51-3 229 258 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes no 4 2.6845E-77 108.44 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 35396000 0 4984800 22531000 1425700 0 6454000 1264 1317 1283 5787;5788;5789;5790 3930;3931;3932;3933 3931 4 DELTESPKYIQK SHNWGTVKDELTESPK ESPKYIQKQISYNYSD K D E Q K Q 0 0 0 1 0 1 2 0 0 1 1 2 0 0 1 1 1 0 1 0 0 12 1 1449.7351 Q8NC51;Q8NC51-2 Q8NC51 229 240 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes no 2;3 0.0029091 92.19 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 22076000 1941800 4761000 5782700 1358000 2339700 5893100 1265 1316 1284 5791;5792;5793;5794;5795;5796;5797;5798;5799;5800;5801;5802;5803 3934;3935;3936;3937;3938;3939;3940 3939 7 DEMVPRLVK RLGHAEQKDEMVPRLV EMVPRLVKLFDFPGRG K D E V K L 0 1 0 1 0 0 1 0 0 0 1 1 1 0 1 0 0 0 0 2 0 9 1 1085.5903 Q9P258 Q9P258 369 377 RCC2 Protein RCC2 yes yes 2 0.019901 97.431 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 18901000 0 358990 3647200 5050600 0 9844100 1266 1575 1285 5804;5805;5806;5807 3941;3942;3943 3942 3 DENEGENKEEDSSVIHYDNEAIAR FGTEELFKDENEGENK YDNEAIARLLDRNQDA K D E A R L 2 1 3 3 0 0 6 1 1 2 0 1 0 0 0 2 0 0 1 1 0 24 1 2762.1903 Q12873;E9PG89;Q12873-2 Q12873 1239 1262 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 3;4 7.0755E-08 64.589 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 2 19084000 0 7583300 2706100 0 0 8794900 1267 430 1286 5808;5809;5810;5811;5812 3944;3945;3946;3947 3945 4 DEPAELKPDSEDLSSQSSASK QSSTEDPKDEPAELKP SSQSSASKASQEDANE K D E S K A 2 0 0 3 0 1 3 0 0 0 2 2 0 0 2 6 0 0 0 0 0 21 1 2219.0077 Q5VTR2 Q5VTR2 531 551 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 3 2.6091E-05 61.139 By matching By MS/MS By matching By matching By matching By matching 1 1 1 10266000 0 5744200 3614000 907890 0 0 1268 1204 1287 5813;5814;5815 3948 3948 1 DEPEEELQK SLGSQGAKDEPEEELQ EPEEELQKGMGTVEGG K D E Q K G 0 0 0 1 0 1 4 0 0 0 1 1 0 0 1 0 0 0 0 0 0 9 0 1115.4982 Q13428-7;E7ETY2;Q13428-6;H0YA99;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 1416 1424 TCOF1 Treacle protein no no 2 0.0064746 96.034 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 2 14544000 4505200 2330400 216980 0 311920 7179200 1269 1082;383 1288 5816;5817;5818;5819;5820;5821 3949;3950;3951 3951 3 DEPEEELQKGMGTVEGGDQSNPK SLGSQGAKDEPEEELQ GGDQSNPKSKKEKKKS K D E P K S 0 0 1 2 0 2 5 4 0 0 1 2 1 0 2 1 1 0 0 1 0 23 1 2473.0915 Q13428-7;E7ETY2;Q13428-6;H0YA99;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 1416 1438 TCOF1 Treacle protein no no 3 4.4645E-21 93.196 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 20905000 10676000 4809700 5419300 0 0 0 1270 1082;383 1289 5822;5823;5824 3952;3953;3954 3954 3 DEPEEELQKGMGTVEGGDQSNPKSK SLGSQGAKDEPEEELQ DQSNPKSKKEKKKSDK K D E S K K 0 0 1 2 0 2 5 4 0 0 1 3 1 0 2 2 1 0 0 1 0 25 2 2688.2185 Q13428-7;E7ETY2;Q13428-6;H0YA99;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 1416 1440 TCOF1 Treacle protein no no 3;4 7.7965E-29 93.388 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 2 1 1 60338000 27352000 0 18648000 5455200 8882500 0 1271 1082;383 1290 5825;5826;5827;5828;5829 3955;3956;3957;3958 3958 3 DEQPSGSVETGFEDKIPK TVAKDLRRDEQPSGSV GFEDKIPKRRFSEMQN R D E P K R 0 0 0 2 0 1 3 2 0 1 0 2 0 1 2 2 1 0 0 1 0 18 1 1961.9218 Q9NVV4;Q5T851 Q9NVV4 43 60 MTPAP Poly(A) RNA polymerase, mitochondrial yes no 3 0.0014561 77.027 By matching By MS/MS By matching By matching By matching By matching 1 1 3286400 0 2832900 0 453510 0 0 1272 1551 1291 5830;5831 3959 3959 1 DEQQISAAVEK LPCIVDVRDEQQISAA QISAAVEKAIKKFGAY R D E E K A 2 0 0 1 0 2 2 0 0 1 0 1 0 0 0 1 0 0 0 1 0 11 0 1216.5935 Q6YN16-2;Q6YN16 Q6YN16-2 77 87 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes no 2 2.8545E-13 117.79 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 7344200 0 1976800 1106800 532070 131280 3597200 1273 1239 1292 5832;5833;5834;5835;5836 3960;3961 3960 2 DEQTPGWTTAASDMK NDGMSEVKDEQTPGWT TTAASDMKFEYLLYGH K D E M K F 2 0 0 2 0 1 1 1 0 0 0 1 1 0 1 1 3 1 0 0 0 15 0 1636.7039 O43829 O43829 250 264 ZBTB14 Zinc finger and BTB domain-containing protein 14 yes yes 2 0.0044887 54.094 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 2584500 0 993830 0 516620 0 1074100 1274 722 1293 5837;5838;5839 3962;3963;3964;3965 3964 4 DERFFSDK EQPIRCEKDERFFSDK DERFFSDKIAKYIPIQ K D E D K I 0 1 0 2 0 0 1 0 0 0 0 1 0 2 0 1 0 0 0 0 0 8 1 1042.472 CON__P02668 CON__P02668 14 21 yes yes 2 0.021372 99.013 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 45645000 0 11551000 293110 13079000 0 20721000 + 1275 291 1294 5840;5841;5842;5843 3966 3966 1 DERFFSDKIAK EQPIRCEKDERFFSDK FFSDKIAKYIPIQYVL K D E A K Y 1 1 0 2 0 0 1 0 0 1 0 2 0 2 0 1 0 0 0 0 0 11 2 1354.6881 CON__P02668 CON__P02668 14 24 yes yes 3 4.2616E-41 131.12 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 72372000 15157000 4600200 13055000 15910000 10824000 12826000 + 1276 291 1295 5844;5845;5846;5847;5848;5849 3967;3968;3969;3970;3971 3970 5 DERQEDPYGPQTK HFVASSSKDERQEDPY DPYGPQTKEVNEQTHF K D E T K E 0 1 0 2 0 2 2 1 0 0 0 1 0 0 2 0 1 0 1 0 0 13 1 1561.7009 O15226;G3V1N1 O15226 69 81 NKRF NF-kappa-B-repressing factor yes no 3 0.0053679 60.937 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 12883000 2245800 1939900 0 1289600 3839800 3567500 1277 578 1296 5850;5851;5852;5853;5854 3972;3973;3974 3974 3 DERQEDPYGPQTKEVNEQTHFASMPR HFVASSSKDERQEDPY THFASMPRDIYQDYTQ K D E P R D 1 2 1 2 0 3 4 1 1 0 0 1 1 1 3 1 2 0 1 1 0 26 2 3088.3945 O15226;G3V1N1 O15226 69 94 NKRF NF-kappa-B-repressing factor yes no 5 0.018034 41.853 By matching By matching By MS/MS By matching By matching By matching 1 2279400 0 0 2279400 0 0 0 1278 578 1297 5855 3975 3975 1 DESQEGKQQYLQSIEER IEPYLKKKDESQEGKQ YLQSIEEREKLDGLYE K D E E R E 0 1 0 1 0 4 4 1 0 1 1 1 0 0 0 2 0 0 1 0 0 17 1 2065.9552 P21912 P21912 161 177 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 3 0.0016557 58.635 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 3285200 0 2157200 1128100 0 0 0 1279 861 1298 5856;5857 3976;3977 3977 2 DESSTGSLAMSTRPR KKIIKVQKDESSTGSL LAMSTRPRRVIERPPL K D E P R R 1 2 0 1 0 0 1 1 0 0 1 0 1 0 1 4 2 0 0 0 0 15 1 1593.7417 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;Q76FK4-3;F5GWN9;F5H540 F5H101 226 240 NOL8 Nucleolar protein 8 yes no 3 0.0006458 74.133 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 19576000 1668000 2648400 2276500 2680200 4934100 5369300 1280 27 1299 5858;5859;5860;5861;5862;5863 3978;3979;3980 3979 3 DETEFYLGK KIEGVYARDETEFYLG ETEFYLGKRCAYVYKA R D E G K R 0 0 0 1 0 0 2 1 0 0 1 1 0 1 0 0 1 0 1 0 0 9 0 1100.5026 F8WBS5;F8WB72;C9K025;P18077 F8WBS5 37 45 RPL35A 60S ribosomal protein L35a yes no 2 0.034563 62.463 By matching By matching By matching By matching By matching By MS/MS 1 1 1949800 0 0 0 551750 0 1398000 1281 277 1300 5864;5865 3981 3981 1 DETYKPHLER IPFKDDPRDETYKPHL TYKPHLERETPKPRRK R D E E R E 0 1 0 1 0 0 2 0 1 0 1 1 0 0 1 0 1 0 1 0 0 10 1 1286.6255 Q96JP5-2;H9KV86;Q96JP5;H3BTR0 Q96JP5-2 232 241 ZFP91;ZFP91-CNTF E3 ubiquitin-protein ligase ZFP91 yes no 3 0.031059 57.174 By matching By matching By matching By matching By matching By MS/MS 1 2286500 0 0 0 0 0 2286500 1282 677 1301 5866 3982 3982 1 DEYRQDYDAGRGGYGK GRSGGQVRDEYRQDYD AGRGGYGKLAQNQ___ R D E G K L 1 2 0 3 0 1 1 4 0 0 0 1 0 0 0 0 0 0 3 0 0 16 2 1848.8027 E9PAR5;P52298;C9JQX9;B3KSB0;P52298-2 E9PAR5 83 98 NCBP2 Nuclear cap-binding protein subunit 2 yes no 3 0.014204 51.004 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 5286100 0 1333100 731280 502000 989690 1730000 1283 399 1302 5867;5868;5869;5870;5871 3983 3983 1 DEYSSSETTGEKPEQNDDDTIK TSRVMEEKDEYSSSET QNDDDTIKSQEEDQPI K D E I K S 0 0 1 4 0 1 4 1 0 1 0 2 0 0 1 3 3 0 1 0 0 22 1 2487.0409 Q8NFC6 Q8NFC6 2840 2861 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 3 1.0356E-05 60.938 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 13245000 0 2510700 2092600 2177500 1864500 4599700 1284 1325 1303 5872;5873;5874;5875;5876 3984;3985;3986;3987;3988;3989 3985 6 DEYTFSPGKSK VPSDGLDKDEYTFSPG TFSPGKSKATPEKSLH K D E S K A 0 0 0 1 0 0 1 1 0 0 0 2 0 1 1 2 1 0 1 0 0 11 1 1257.5877 Q02880-2;Q02880;B4DLV2 Q02880-2 1414 1424 TOP2B DNA topoisomerase 2-beta yes no 2;3 0.011412 77.062 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 2 1 2 2 14810000 1456500 4443600 1395500 0 2536700 4977300 1285 1035 1304 5877;5878;5879;5880;5881;5882;5883;5884 3990;3991;3992;3993 3991 4 DFDFESANAQFNK DGPMKFEKDFDFESAN SANAQFNKEEIDREFH K D F N K E 2 0 2 2 0 1 1 0 0 0 0 1 0 3 0 1 0 0 0 0 0 13 0 1531.6579 B4DTG6;Q8ND56-2;Q8ND56;I3L420 B4DTG6 254 266 LSM14A Protein LSM14 homolog A yes no 2 0.037268 52.821 By matching By MS/MS By matching By matching By matching By matching 1 4989200 0 4989200 0 0 0 0 1286 128 1305 5885 3994 3994 0 DFFAQQQHLTPDK QVMGSLVKDFFAQQQH QQHLTPDKIYHVTVMP K D F D K I 1 0 0 2 0 3 0 0 1 0 1 1 0 2 1 0 1 0 0 0 0 13 0 1573.7525 H3BSH2;Q9H6Q4-3;Q9H6Q4 H3BSH2 123 135 NARFL Cytosolic Fe-S cluster assembly factor NARFL yes no 3 0.0063503 58.04 By matching By matching By matching By matching By matching By MS/MS 1 1 1881600 0 0 0 401530 0 1480100 1287 648 1306 5886;5887 3995 3995 1 DFIGDRSIPK LGNYDEMKDFIGDRSI IGDRSIPKLVAIPKPT K D F P K L 0 1 0 2 0 0 0 1 0 2 0 1 0 1 1 1 0 0 0 0 0 10 1 1146.6033 Q9UHB7;Q9UHB7-2;Q9UHB7-3;C9JCE0 Q9UHB7 64 73 AFF4 AF4/FMR2 family member 4 yes no 2 0.03691 68.626 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 4897800 1356400 763610 773160 648210 0 1356400 1288 1592 1307 5888;5889;5890;5891;5892 3996 3996 1 DFIKTTVK TYDLTERKDFIKTTVK DFIKTTVKELIS____ K D F V K E 0 0 0 1 0 0 0 0 0 1 0 2 0 1 0 0 2 0 0 1 0 8 1 950.54368 P35659;P35659-2;B4DFG0;H0Y993 P35659 364 371 DEK Protein DEK yes no 2 0.038857 86.67 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 13660000 2304800 3287400 2023500 1256700 2623100 2164200 1289 901 1308 5893;5894;5895;5896;5897;5898 3997 3997 1 DFLDEHYDIPK CKEGILIKDFLDEHYD DEHYDIPKISMVNNII K D F P K I 0 0 0 3 0 0 1 0 1 1 1 1 0 1 1 0 0 0 1 0 0 11 0 1390.6405 Q8NEM2 Q8NEM2 518 528 SHCBP1 SHC SH2 domain-binding protein 1 yes yes 3 0.0051783 70.412 By matching By MS/MS By matching By matching By matching By matching 1 5977100 0 5977100 0 0 0 0 1290 1323 1309 5899 3998 3998 1 DFLLTAR PRKIEEIKDFLLTARR KDFLLTARRKDAKSVK K D F A R R 1 1 0 1 0 0 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 7 0 834.45995 P63173 P63173 10 16 RPL38 60S ribosomal protein L38 yes yes 2 4.0928E-44 145.04 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 138970000 62959000 0 18136000 6072700 22290000 29512000 1291 1005 1310 5900;5901;5902;5903;5904 3999;4000;4001;4002;4003 4003 5 DFMIQGGDFTRGDGTGGK SKFHRVIKDFMIQGGD RGDGTGGKSIYGERFP K D F G K S 0 1 0 3 0 1 0 6 0 1 0 1 1 2 0 0 2 0 0 0 0 18 1 1857.8316 P23284 P23284 99 116 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 3 0.00079981 69.431 By matching By MS/MS By matching By matching By matching By matching 1 1 5217800 0 2801400 0 2416400 0 0 1292 867 1311 5905;5906 4004 4004 1 DFMIQGGDPTGTGRGGASIYGK TKFHRIIKDFMIQGGD GGASIYGKQFEDELHP K D F G K Q 1 1 0 2 0 1 0 7 0 2 0 1 1 1 1 1 2 0 1 0 0 22 1 2184.027 Q9Y3C6 Q9Y3C6 59 80 PPIL1 Peptidyl-prolyl cis-trans isomerase-like 1 yes yes 3 0.0090183 55.267 By matching By matching By matching By MS/MS By matching By MS/MS 2 1 10054000 0 0 0 7888900 0 2165400 1293 1646 1312;1313 5907;5908;5909 4005;4006 4006 184 2 DFPETNNILK AEEPYICKDFPETNNI PETNNILKIVADFSAS K D F L K I 0 0 2 1 0 0 1 0 0 1 1 1 0 1 1 0 1 0 0 0 0 10 0 1189.5979 F8W720;B4DUT7;P49915 F8W720 359 368 GMPS GMP synthase [glutamine-hydrolyzing] yes no 2 0.026777 58.699 By matching By matching By matching By matching By matching By MS/MS 1 13153000 0 0 0 0 0 13153000 1294 129 1314 5910 4007 4007 1 DFPLHLGK SGAHGPEKDFPLHLGK DFPLHLGKNVVGRMPD K D F G K N 0 0 0 1 0 0 0 1 1 0 2 1 0 1 1 0 0 0 0 0 0 8 0 925.50215 Q14676;Q14676-2;E9PGY5;Q14676-3;F8VV34;E7EVA7;Q14676-4;A2AB06;A2AB07;A2AB05;F8WCC2;E7ER07;E7ENQ0;A1Z5I7 Q14676 46 53 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 2 0.017128 82.241 By matching By matching By matching By matching By matching By MS/MS 1 12830000 0 0 0 0 0 12830000 1295 1109 1315 5911 4008 4008 1 DFQESSIK SDWHSKTKDFQESSIK DFQESSIKSLKEKLLL K D F I K S 0 0 0 1 0 1 1 0 0 1 0 1 0 1 0 2 0 0 0 0 0 8 0 952.45018 Q96RL1;F8VQY2;Q96RL1-3;F2Z2T8 Q96RL1 375 382 UIMC1 BRCA1-A complex subunit RAP80 yes no 2 0.015568 84.498 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 11659000 1247700 2693400 3234100 962900 857220 2664000 1296 535 1316 5912;5913;5914;5915;5916;5917 4009;4010 4010 2 DFQSCFGLHETR TDSKRYEKDFQSCFGL CFGLHETRSGDICNAC K D F T R S 0 1 0 1 1 1 1 1 1 0 1 0 0 2 0 1 1 0 0 0 0 12 0 1495.6514 F5H6U2;F5GZ82;Q9NP50;B7Z287 F5H6U2 37 48 FAM60A Protein FAM60A yes no 2;3 0.0086188 60.364 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 8715200 3385100 1337400 0 0 0 3992700 1297 183 1317 5918;5919;5920 4011;4012 4012 2 DFRDHAEQQHIAAQQK LSRPSLNKDFRDHAEQ QHIAAQQKAALQHAHA K D F Q K A 3 1 0 2 0 4 1 0 2 1 0 1 0 1 0 0 0 0 0 0 0 16 1 1920.9191 Q9NRY2 Q9NRY2 54 69 INIP SOSS complex subunit C yes yes 4 0.0024424 57.414 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 10338000 0 715300 2136500 2484000 2461800 2540800 1298 1539 1318 5921;5922;5923;5924;5925 4013;4014 4013 2 DFRLNSHLIQHQR YTCSECGKDFRLNSHL SHLIQHQRIHTGEKAH K D F Q R I 0 2 1 1 0 2 0 0 2 1 2 0 0 1 0 1 0 0 0 0 0 13 1 1662.8703 Q8N720;Q8N720-3 Q8N720 388 400 ZNF655 Zinc finger protein 655 yes no 4 0.0016087 74.962 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 5842300 0 0 1095700 872650 1063500 2810400 1299 1307 1319 5926;5927;5928;5929 4015;4016 4016 2 DFRQPADLAMHRR YHCEKCGKDFRQPADL ADLAMHRRVHTGDRPF K D F R R V 2 3 0 2 0 1 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 13 2 1611.8052 Q96K58;C9JHH8 Q96K58 316 328 ZNF668 Zinc finger protein 668 yes no 4 0.016609 49.448 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3198300 0 0 450460 789320 1123400 835060 1300 1401 1320 5930;5931;5932;5933 4017 4017 1 DFSDITK ELANQVSKDFSDITKK KDFSDITKKLSVACFY K D F T K K 0 0 0 2 0 0 0 0 0 1 0 1 0 1 0 1 1 0 0 0 0 7 0 824.3916 Q9NR30;Q9NR30-2 Q9NR30 279 285 DDX21 Nucleolar RNA helicase 2 yes no 1 0.030389 50.632 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 2387400 608620 0 409730 0 1369100 0 1301 1534 1321 5934;5935;5936 4018;4019 4018 2 DFSESRNNRFSTPEQAAK EDGSCSYKDFSESRNN STPEQAAKNRIQHPSN K D F A K N 2 2 2 1 0 1 2 0 0 0 0 1 0 2 1 3 1 0 0 0 0 18 2 2082.9719 P14866;A6NIT8 P14866 476 493 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 3;4 0.0092786 50.874 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 1 2 2 462580000 0 92298000 95278000 19445000 133940000 121620000 1302 838 1322 5937;5938;5939;5940;5941;5942;5943;5944;5945 4020;4021;4022;4023 4021 4 DFSNSPLHR QEDQGLTKDFSNSPLH FSNSPLHRFKKPGSKN K D F H R F 0 1 1 1 0 0 0 0 1 0 1 0 0 1 1 2 0 0 0 0 0 9 0 1071.5098 O95758-1;O95758-6;O95758-2;O95758;O95758-5;O95758-4;B1ALY6 O95758-1 419 427 PTBP3 Polypyrimidine tract-binding protein 3 yes no 2 0.018196 70.816 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 6591600 611230 707150 699640 389300 1711400 2472800 1303 774 1323 5946;5947;5948;5949;5950;5951 4024 4024 1 DFTEDTIPR NNCSPTRKDFTEDTIP FTEDTIPRTQIERRKT K D F P R T 0 1 0 2 0 0 1 0 0 1 0 0 0 1 1 0 2 0 0 0 0 9 0 1092.5088 O95243-2 O95243-2 392 400 MBD4 Methyl-CpG-binding domain protein 4 yes yes 2 0.026416 66.299 By matching By matching By matching By matching By matching By MS/MS 1 1 3925800 0 0 0 0 2064900 1860900 1304 769 1324 5952;5953 4025 4025 1 DFTEDTIPRTQIER NNCSPTRKDFTEDTIP IPRTQIERRKTSLYFS K D F E R R 0 2 0 2 0 1 2 0 0 2 0 0 0 1 1 0 3 0 0 0 0 14 1 1719.8428 O95243-2 O95243-2 392 405 MBD4 Methyl-CpG-binding domain protein 4 yes yes 2;3 0.0035893 61.11 By MS/MS By matching By matching By MS/MS By matching By MS/MS 2 1 1 1 30194000 21142000 2394400 0 3299000 0 3358200 1305 769 1325 5954;5955;5956;5957;5958 4026;4027;4028;4029;4030 4027 5 DFTKQKYPEHAIHK VSEHSIIKDFTKQKYP YPEHAIHKVLQLMLRR K D F H K V 1 0 0 1 0 1 1 0 2 1 0 3 0 1 1 0 1 0 1 0 0 14 2 1740.8948 P33992;B1AHB1 P33992 697 710 MCM5 DNA replication licensing factor MCM5 yes no 3;4 0.011394 66.393 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 1 2 2 26848000 0 3715100 4095900 159200 5335400 13542000 1306 892 1326 5959;5960;5961;5962;5963;5964;5965;5966;5967 4031;4032;4033;4034;4035;4036 4034 5 DFVEDDTTHG VITAEMAKDFVEDDTT VEDDTTHG________ K D F H G - 0 0 0 3 0 0 1 1 1 0 0 0 0 1 0 0 2 0 0 1 0 10 0 1134.4465 Q9UQE7 Q9UQE7 1208 1217 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.011673 70.908 By MS/MS By matching By matching By matching By matching By matching 1 888380 888380 0 0 0 0 0 1307 1625 1327 5968 4037 4037 1 DFWGDDYKNHVK LSCIDCGKDFWGDDYK DDYKNHVKCISEDQKY K D F V K C 0 0 1 3 0 0 0 1 1 0 0 2 0 1 0 0 0 1 1 1 0 12 1 1522.6841 Q9NX58;D6RDJ1 Q9NX58 39 50 LYAR Cell growth-regulating nucleolar protein yes no 3 0.008017 61.213 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 5414000 782610 753910 0 0 2530300 1347200 1308 1559 1328 5969;5970;5971;5972 4038 4038 1 DGANIVIAAK AIALKAAKDGANIVIA ANIVIAAKTAQPHPKL K D G A K T 3 0 1 1 0 0 0 1 0 2 0 1 0 0 0 0 0 0 0 1 0 10 0 970.54475 Q6YN16-2;Q6YN16 Q6YN16-2 33 42 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes no 2 3.5969E-05 109.83 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2 1 49847000 10507000 5348800 6731100 4454200 9197500 13608000 1309 1239 1329 5973;5974;5975;5976;5977;5978;5979;5980 4039;4040;4041;4042;4043;4044;4045;4046 4044 8 DGEIYCKGCYAK ESTTLADKDGEIYCKG YCKGCYAKNFGPKGFG K D G A K N 1 0 0 1 2 0 1 2 0 1 0 2 0 0 0 0 0 0 2 0 0 12 1 1462.6221 P21291;E9PND2;B3KVC9;E9PP21 P21291 162 173 CSRP1 Cysteine and glycine-rich protein 1 yes no 3 0.015937 54.343 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 4387100 909670 685850 559570 1685800 0 546210 1310 859 1330 5981;5982;5983;5984;5985 4047;4048 4047 2 DGERCRDDSFFGETSHNYHK DYEDDRLRDGERCRDD ETSHNYHKFDSEYERM R D G H K F 0 2 1 3 1 0 2 2 2 0 0 1 0 2 0 2 1 0 1 0 0 20 2 2456.02 P43243;A8MXP9;D6REM6;D6R991 P43243 226 245 MATR3 Matrin-3 yes no 4 0.0046844 45.384 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 7559900 1115700 0 1166100 911500 1875200 2491400 1311 52 1331 5986;5987;5988;5989;5990 4049 4049 1 DGFGGLAAAR LILTAQERDGFGGLAA FGGLAAARGRGRGRGD R D G A R G 3 1 0 1 0 0 0 3 0 0 1 0 0 1 0 0 0 0 0 0 0 10 0 933.46683 Q96I24 Q96I24 328 337 FUBP3 Far upstream element-binding protein 3 yes yes 2 0.026776 58.699 By matching By matching By matching By matching By matching By MS/MS 1 1 1 10358000 0 0 2032400 585660 0 7739600 1312 1394 1332 5991;5992;5993 4050 4050 1 DGFLHETLLDRR KILKKARKDGFLHETL HETLLDRRAKLKADRY K D G R R A 0 2 0 2 0 0 1 1 1 0 3 0 0 1 0 0 1 0 0 0 0 12 1 1470.7579 Q14331 Q14331 237 248 FRG1 Protein FRG1 yes yes 3 1.7181E-50 132.25 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 129670000 8506200 0 17802000 8055700 6566000 88738000 1313 1106 1333 5994;5995;5996;5997;5998 4051;4052;4053;4054 4051 4 DGKDPNQFTISR LLPDMLRKDGKDPNQF PNQFTISRRGAKISET K D G S R R 0 1 1 2 0 1 0 1 0 1 0 1 0 1 1 1 1 0 0 0 0 12 1 1376.6684 F8VW34;F8VX54;F8VZH2;F8VWK5;F8VUY0;F8VVS9;A6NE42;Q15583-2;Q15583-3;Q15583;F8VXG3;F8VYL4;H0YKN5;Q9GZN2 F8VW34 81 92 TGIF1;TGIF2 Homeobox protein TGIF1;Homeobox protein TGIF2 yes no 3 0.005394 64.104 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 22125000 607690 3275700 4946700 3516900 4125200 5652900 1314 17 1334 5999;6000;6001;6002;6003;6004 4055;4056;4057 4055 3 DGKPVSEYIIK RKLSVLGKDGKPVSEY PVSEYIIKTDENVRKE K D G I K T 0 0 0 1 0 0 1 1 0 2 0 2 0 0 1 1 0 0 1 1 0 11 1 1247.6762 Q8NFC6 Q8NFC6 805 815 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 3 0.037679 49.28 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2155600 0 0 0 219220 152730 1783700 1315 1325 1335 6005;6006;6007 4058 4058 1 DGNMVEENPYR CEERIFQKDGNMVEEN MVEENPYRQLPCNCHG K D G Y R Q 0 1 2 1 0 0 2 1 0 0 0 0 1 0 1 0 0 0 1 1 0 11 0 1322.5561 Q7Z2T5 Q7Z2T5 499 509 TRMT1L TRMT1-like protein yes yes 2 0.014073 47.429 By matching By matching By matching By matching By matching By MS/MS 1 684840 0 0 0 0 0 684840 1316 1248 1336 6008 4059 4059 1 DGNMVEENPYRQLPCNCHGSMPGK CEERIFQKDGNMVEEN CHGSMPGKTAIELGPL K D G G K T 0 1 3 1 2 1 2 3 1 0 1 1 2 0 3 1 0 0 1 1 0 24 1 2789.1778 Q7Z2T5 Q7Z2T5 499 522 TRMT1L TRMT1-like protein yes yes 3;4 4.3391E-09 66.122 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 1 2 2 2 34074000 5342000 1456200 7622700 0 4728500 14924000 1317 1248 1337 6009;6010;6011;6012;6013;6014;6015;6016;6017 4060;4061;4062;4063;4064;4065;4066;4067;4068 4063 9 DGPVRPQNAEEEK RGGSTVPKDGPVRPQN PQNAEEEK________ K D G E K - 1 1 1 1 0 1 3 1 0 0 0 1 0 0 2 0 0 0 0 1 0 13 1 1467.6954 A2AAT0;E7ESG6;F5H0B5;Q92504 A2AAT0 208 220 SLC39A7 Zinc transporter SLC39A7 yes no 3 0.0021661 71.888 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 4996300 550010 661510 846610 545950 886520 1505700 1318 6 1338 6018;6019;6020;6021;6022;6023 4069;4070;4071 4070 3 DGSAFEDGLRHPFIVNHPK AICCRVTRDGSAFEDG PFIVNHPKVGRVSIYD R D G P K V 1 1 1 2 0 0 1 2 2 1 1 1 0 2 2 1 0 0 0 1 0 19 1 2135.0548 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 1087 1105 ADAR Double-stranded RNA-specific adenosine deaminase no no 3;4 6.9508E-199 156.72 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 3 1 442390000 39226000 46374000 70126000 57874000 30301000 198490000 1319 352;968 1339 6024;6025;6026;6027;6028;6029;6030;6031;6032;6033;6034 4072;4073;4074;4075;4076;4077;4078;4079;4080 4073 8 DGTGHYLCNACGLYHK TATPLWRRDGTGHYLC NACGLYHKMNGQNRPL R D G H K M 1 0 1 1 2 0 0 3 2 0 2 1 0 0 0 0 1 0 2 0 0 16 0 1864.7985 P23769;P23769-2;P23771;P23771-2 P23769 309 324 GATA2;GATA3 Endothelial transcription factor GATA-2;Trans-acting T-cell-specific transcription factor GATA-3 no no 3;4 0.0085828 44.925 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 2 2 2 17487000 777210 2135700 2427100 0 2079200 10068000 1320 869 1340 6035;6036;6037;6038;6039;6040;6041;6042 4081;4082;4083 4081 3 DGTGHYLCNACGLYSK IQTPLWRRDGTGHYLC NACGLYSKMNGLSRPL R D G S K M 1 0 1 1 2 0 0 3 1 0 2 1 0 0 0 1 1 0 2 0 0 16 0 1814.7716 Q92908-2;Q92908 Q92908-2 258 273 GATA6 Transcription factor GATA-6 yes no 2;3 0.0019157 65.231 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2 2 19014000 2989000 1783000 2059100 172020 4089400 7921300 1321 1363 1341 6043;6044;6045;6046;6047;6048;6049;6050 4084;4085;4086;4087;4088 4087 4 DGVGMVEYLRK VCYADVQKDGVGMVEY GMVEYLRKEDMEYALR K D G R K E 0 1 0 1 0 0 1 2 0 0 1 1 1 0 0 0 0 0 1 2 0 11 1 1265.6438 H0YIB4;Q13242 H0YIB4 90 100 SRSF9 Serine/arginine-rich splicing factor 9 yes no 2;3 0.0094968 89.805 By matching By matching By matching By matching By matching By MS/MS 1 2 6525400 0 1006000 0 0 0 5519400 1322 623 1342 6051;6052;6053 4089;4090 4090 2 DGVLEEQIER DDRSSDRKDGVLEEQI VLEEQIERLQEKVESA K D G E R L 0 1 0 1 0 1 3 1 0 1 1 0 0 0 0 0 0 0 0 1 0 10 0 1186.583 Q09161 Q09161 685 694 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 2 0.011635 70.942 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 13628000 1671100 2337100 2288600 1080200 1741400 4510000 1323 1052 1343 6054;6055;6056;6057;6058;6059 4091 4091 1 DGVMDLLTPVQTV GEVAFLTKDGVMDLLT LLTPVQTV________ K D G T V - 0 0 0 2 0 1 0 1 0 0 2 0 1 0 1 0 2 0 0 3 0 13 0 1386.7065 Q7L3T8 Q7L3T8 463 475 PARS2 Probable proline--tRNA ligase, mitochondrial yes yes 2 0.015101 68.463 By matching By matching By matching By MS/MS By matching By matching 1 6011800 0 0 0 6011800 0 0 1324 1245 1344 6060 4092 4092 0 DGVVEITGKHEER DELTVKTKDGVVEITG ITGKHEERQDEHGYIS K D G E R Q 0 1 0 1 0 0 3 2 1 1 0 1 0 0 0 0 1 0 0 2 0 13 1 1467.7318 B4DL87;P04792 B4DL87 80 92 HSPB1 Heat shock protein beta-1 yes no 3 0.0098622 55.899 By matching By matching By matching By matching By MS/MS By matching 1 1283200 0 0 0 0 1283200 0 1325 96 1345 6061 4093 4093 1 DGWLGPGPMPAVHK KGQFDHSKDGWLGPGP GPMPAVHKAANGHSRT K D G H K A 1 0 0 1 0 0 0 3 1 0 1 1 1 0 3 0 0 1 0 1 0 14 0 1460.7235 Q8N655 Q8N655 111 124 C10orf12 Uncharacterized protein C10orf12 yes yes 3 0.031987 44.193 By matching By matching By matching By matching By matching By MS/MS 1 2458800 0 0 0 0 0 2458800 1326 1305 1346 6062 4094 4094 150 0 DGWLYGEHDVSK TLLIPEEKDGWLYGEH YGEHDVSKARGWFPSS K D G S K A 0 0 0 2 0 0 1 2 1 0 1 1 0 0 0 1 0 1 1 1 0 12 0 1404.631 Q9UHR4 Q9UHR4 376 387 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 2 9.9487E-27 122.34 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5147800 0 0 805660 852760 1882400 1607000 1327 1595 1347 6063;6064;6065;6066 4095 4095 1 DGWPAMCIHGDK DLTRRMRRDGWPAMCI AMCIHGDKSQPERDWV R D G D K S 1 0 0 2 1 0 0 2 1 1 0 1 1 0 1 0 0 1 0 0 0 12 0 1385.5856 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 362 373 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 2;3 0.001304 90.697 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 2 1 170010000 48569000 7666300 53826000 8223300 25098000 26626000 1328 1361;629 1348 6067;6068;6069;6070;6071;6072;6073;6074;6075 4096;4097;4098;4099;4100;4101;4102 4102 7 DGWPAMGIHGDK ELTRKMRRDGWPAMGI AMGIHGDKSQQERDWV R D G D K S 1 0 0 2 0 0 0 3 1 1 0 1 1 0 1 0 0 1 0 0 0 12 0 1282.5765 P17844;E7ETL9 P17844 364 375 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 2;3 0.0017694 75.89 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 3 58002000 2243200 5725800 11831000 3244300 0 34958000 1329 853 1349 6076;6077;6078;6079;6080;6081;6082;6083;6084;6085;6086 4103;4104;4105;4106;4107;4108;4109 4106 7 DGYRYILAEPDPHAPDPEK PLEHPFNKDGYRYILA PHAPDPEKLELDCWAG K D G E K L 2 1 0 3 0 0 2 1 1 1 1 1 0 0 4 0 0 0 2 0 0 19 1 2182.0331 F5H8F7;Q9UBL3-3;Q9UBL3;Q9UBL3-2 F5H8F7 200 218 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes no 4 0.0006606 63.998 By matching By MS/MS By matching By matching By matching By matching 1 4675600 0 4675600 0 0 0 0 1330 530 1350 6087 4110 4110 1 DHAVVVGVYRPPPK LTLEPYERDHAVVVGV GVYRPPPKVKN_____ R D H P K V 1 1 0 1 0 0 0 1 1 0 0 1 0 0 3 0 0 0 1 4 0 14 1 1532.8463 P22087 P22087 305 318 FBL rRNA 2-O-methyltransferase fibrillarin yes yes 3 0.0018381 67.118 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2671700 0 0 0 0 1700200 971570 1331 862 1351 6088;6089 4111;4112 4111 2 DHINDIIK RDRLQYFRDHINDIIK DHINDIIKIQAFIRAN R D H I K I 0 0 1 2 0 0 0 0 1 3 0 1 0 0 0 0 0 0 0 0 0 8 0 966.51345 P46940;H0YLE8 P46940 834 841 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 2 0.02554 75.043 By matching By matching By matching By matching By matching By MS/MS 1 927610 0 0 0 0 0 927610 1332 929 1352 6090 4113 4113 1 DHIVLTVLPDQDQSDEAQEK SVVRLQFKDHIVLTVL QSDEAQEKMVYIYHSL K D H E K M 1 0 0 4 0 3 2 0 1 1 2 1 0 0 1 1 1 0 0 2 0 20 0 2279.0917 Q8IUF8-4;Q8IUF8;Q8IUF8-3 Q8IUF8-4 369 388 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA yes no 3 0.00091112 63.998 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 1333 1275 1353 6091 4114 4114 1 DHLQGLDPGEPNKSK KDIGSSSKDHLQGLDP PGEPNKSKEVGGEKIV K D H S K E 0 0 1 2 0 1 1 2 1 0 2 2 0 0 2 1 0 0 0 0 0 15 1 1633.806 Q9UKJ3;Q9UKJ3-2 Q9UKJ3 601 615 GPATCH8 G patch domain-containing protein 8 yes no 3 0.0082564 48.899 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2480300 0 740650 0 0 738520 1001100 1334 1601 1354 6092;6093;6094 4115 4115 1 DHLQGLDPGEPNKSKEVGGEK KDIGSSSKDHLQGLDP SKEVGGEKIVRSSGGR K D H E K I 0 0 1 2 0 1 3 4 1 0 2 3 0 0 2 1 0 0 0 1 0 21 2 2233.0975 Q9UKJ3;Q9UKJ3-2 Q9UKJ3 601 621 GPATCH8 G patch domain-containing protein 8 yes no 4 0.0073894 41.615 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 6158900 955050 585460 1248300 1256900 1186400 926830 1335 1601 1355 6095;6096;6097;6098;6099;6100 4116;4117 4116 2 DHNIRAQEPESGLSEETQVK VAVARGSKDHNIRAQE LSEETQVKCLMDQATD K D H V K C 1 1 1 1 0 2 4 1 1 1 1 1 0 0 1 2 1 0 0 1 0 20 1 2266.0826 P78527;E7EUY0;P78527-2 P78527 4086 4105 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3;4 1.4363E-52 118.52 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 3 2 129370000 8867900 29525000 16930000 12580000 31314000 30151000 1336 1012 1356 6101;6102;6103;6104;6105;6106;6107;6108;6109;6110;6111;6112 4118;4119;4120;4121;4122;4123;4124;4125;4126;4127;4128 4124 11 DHQTITIQEMPEKAPAGQLPR EYGLSVYKDHQTITIQ APAGQLPRSVDVILDD K D H P R S 2 1 0 1 0 3 2 1 1 2 1 1 1 0 3 0 2 0 0 0 0 21 1 2359.1954 P25205 P25205 195 215 MCM3 DNA replication licensing factor MCM3 yes yes 3 2.2537E-09 85.737 By matching By MS/MS By matching By matching By matching By matching 1 3122400 0 3122400 0 0 0 0 1337 873 1357 6113 4129 4129 1 DHSIYIWDVKDINRVGK QWLSCVYKDHSIYIWD KDINRVGKVWSELFHS K D H G K V 0 1 1 3 0 0 0 1 1 3 0 2 0 0 0 1 0 1 1 2 0 17 2 2057.0694 O43379-3;H7C3R4;O43379-2;O43379;O43379-4 O43379-3 380 396 WDR62 WD repeat-containing protein 62 yes no 4 0.0032937 49.988 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 12825000 4818900 2295400 0 0 5710900 0 1338 671 1358 6114;6115;6116 4130;4131 4130 2 DHTLVQTIAR CKIAAKTKDHTLVQTI TLVQTIARGVFEAIVD K D H A R G 1 1 0 1 0 1 0 0 1 1 1 0 0 0 0 0 2 0 0 1 0 10 0 1152.6251 Q14684-2;Q14684 Q14684-2 187 196 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 2 0.0027611 97.813 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 39268000 172060 3985700 1962000 1609200 6582500 24957000 1339 1111 1359 6117;6118;6119;6120;6121;6122 4132;4133;4134;4135;4136 4134 5 DHTVSGDEDYCPR YRFNHHCKDHTVSGDE GDEDYCPRSKKANLGK K D H P R S 0 1 0 3 1 0 1 1 1 0 0 0 0 0 1 1 1 0 1 1 0 13 0 1549.6103 Q9UIG0-2;Q9UIG0 Q9UIG0-2 939 951 BAZ1B Tyrosine-protein kinase BAZ1B yes no 2 0.016182 50.897 By matching By matching By matching By matching By MS/MS By matching 1 1 1209900 0 0 0 0 862550 347400 1340 1596 1360 6123;6124 4137 4137 1 DHTVSGDEDYCPRSK YRFNHHCKDHTVSGDE EDYCPRSKKANLGKNA K D H S K K 0 1 0 3 1 0 1 1 1 0 0 1 0 0 1 2 1 0 1 1 0 15 1 1764.7373 Q9UIG0-2;Q9UIG0 Q9UIG0-2 939 953 BAZ1B Tyrosine-protein kinase BAZ1B yes no 3 0.00049468 83.877 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 2781800 696580 317740 532740 957590 0 277110 1341 1596 1361 6125;6126;6127;6128;6129 4138;4139;4140 4139 3 DIAAHIKKEFDK LEKYNIEKDIAAHIKK HIKKEFDKKYNPTWHC K D I D K K 2 0 0 2 0 0 1 0 1 2 0 3 0 1 0 0 0 0 0 0 0 12 2 1413.7616 P63167 P63167 37 48 DYNLL1 Dynein light chain 1, cytoplasmic yes yes 2;3 4.3493E-139 160.86 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 20416000 0 1284800 3704800 0 1632200 13794000 1342 1004 1362 6130;6131;6132;6133;6134 4141;4142;4143;4144 4143 4 DIAFLEAQIYEYVEILGEQR KRDTERNKDIAFLEAQ VEILGEQRHLTHENVQ K D I Q R H 2 1 0 1 0 2 4 1 0 3 2 0 0 1 0 0 0 0 2 1 0 20 0 2398.2056 E7EUT8;Q12874 E7EUT8 266 285 SF3A3 Splicing factor 3A subunit 3 yes no 3 0.00013856 78.554 By matching By matching By matching By MS/MS By matching By matching 1 1 39453000 0 27149000 0 12304000 0 0 1343 387 1363 6135;6136 4145 4145 1 DIDIHEVR PVRHLYTKDIDIHEVR DIDIHEVRIGWSLTTS K D I V R I 0 1 0 2 0 0 1 0 1 2 0 0 0 0 0 0 0 0 0 1 0 8 0 995.50361 Q00839;B3KX72;Q5RI18;Q00839-2 Q00839 353 360 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 2 0.016902 82.426 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 12790000 0 2100000 2169500 919810 3345200 4255800 1344 1022;1023 1364 6137;6138;6139;6140;6141 4146;4147 4147 2 DIELHLESSSHQETLDHIQK KFRTFEEKDIELHLES ETLDHIQKQTKFDKVV K D I Q K Q 0 0 0 2 0 2 3 0 3 2 3 1 0 0 0 3 1 0 0 0 0 20 0 2358.1452 Q5BKZ1;Q5BKZ1-3 Q5BKZ1 326 345 ZNF326 DBIRD complex subunit ZNF326 yes no 4 0.00016702 63.894 By matching By matching By matching By matching By matching By MS/MS 1 4864500 0 0 0 0 0 4864500 1345 1177 1365 6142 4148 4148 1 DIENYIQDGK KNIHGYMKDIENYIQD ENYIQDGKDDYKKQKE K D I G K D 0 0 1 2 0 1 1 1 0 2 0 1 0 0 0 0 0 0 1 0 0 10 0 1193.5564 Q92878-2;Q92878;Q92878-3 Q92878-2 966 975 RAD50 DNA repair protein RAD50 yes no 2 0.021394 62.466 By matching By matching By matching By matching By matching By MS/MS 1 1 3365300 0 1366000 0 0 0 1999400 1346 1362 1366 6143;6144 4149 4149 1 DIENYIQDGKDDYK KNIHGYMKDIENYIQD QDGKDDYKKQKETELN K D I Y K K 0 0 1 4 0 1 1 1 0 2 0 2 0 0 0 0 0 0 2 0 0 14 1 1714.7686 Q92878-2;Q92878;Q92878-3 Q92878-2 966 979 RAD50 DNA repair protein RAD50 yes no 2;3 8.7899E-06 94.688 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 2 1 1 20360000 0 2264700 13478000 1565000 0 3052700 1347 1362 1367 6145;6146;6147;6148;6149 4150;4151;4152;4153 4151 4 DIIGLAETGSGK IPLALQGRDIIGLAET LAETGSGKTGAFALPI R D I G K T 1 0 0 1 0 0 1 3 0 2 1 1 0 0 0 1 1 0 0 0 0 12 0 1159.6085 Q9H0S4;G5E955 Q9H0S4 63 74 DDX47 Probable ATP-dependent RNA helicase DDX47 yes no 2 0.029705 67.118 By matching By matching By matching By matching By matching By MS/MS 1 19945000 0 0 0 0 0 19945000 1348 1481 1368 6150 4154 4154 0 DIIHDPGRGAPLAK GYIKGIVKDIIHDPGR GRGAPLAKVVFRDPYR K D I A K V 2 1 0 2 0 0 0 2 1 2 1 1 0 0 2 0 0 0 0 0 0 14 1 1458.7943 E9PKZ0;P62917;G3V1A1;E9PKU4 E9PKZ0 47 60 RPL8 60S ribosomal protein L8 yes no 3 0.0011289 81.709 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2816500 618500 0 0 0 894020 1304000 1349 456 1369 6151;6152;6153 4155;4156 4156 2 DIIHYDPTK SVAAKKFKDIIHYDPT IIHYDPTKQDHATYER K D I T K Q 0 0 0 2 0 0 0 0 1 2 0 1 0 0 1 0 1 0 1 0 0 9 0 1100.5502 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;Q76FK4-3 F5H101 943 951 NOL8 Nucleolar protein 8 yes no 2 0.0087494 86.882 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2792000 134590 1134100 0 0 0 1523300 1350 27 1370 6154;6155;6156 4157 4157 1 DIISDTSGDFRK MYKTDLEKDIISDTSG DTSGDFRKLMVALAK_ K D I R K L 0 1 0 3 0 0 0 1 0 2 0 1 0 1 0 2 1 0 0 0 0 12 1 1352.6572 H0YKS4;H0YMD0;H0YMU9;H0YN42;P07355;A6NMY6;P07355-2;H0YNP5;H0YM50;H0YN52;H0YNA0;H0YN28;H0YL33;B3KRQ1 H0YKS4 158 169 ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein yes no 2;3 1.1027E-26 119.34 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 1 1 1 2 16744000 706260 7036600 1936400 989530 1258500 4816900 1351 626 1371 6157;6158;6159;6160;6161;6162;6163;6164 4158;4159;4160;4161;4162 4158 5 DIKAFMGTPVQK KPAGGDEKDIKAFMGT FMGTPVQKLDLAGTLP K D I Q K L 1 0 0 1 0 1 0 1 0 1 0 2 1 1 1 0 1 0 0 1 0 12 1 1333.7064 P46013;F5H4V4;P46013-2 P46013 1186 1197 MKI67 Antigen KI-67 no no 3 1.7497E-38 130.69 By MS/MS By matching By matching By matching By matching By matching 1 14271000 14271000 0 0 0 0 0 1352 919;920 1372 6165 4163 4163 1 DIKPIIKDEK MSSFKEEKDIKPIIKD KPIIKDEKGRVGSGSG K D I E K G 0 0 0 2 0 0 1 0 0 3 0 3 0 0 1 0 0 0 0 0 0 10 2 1197.6969 Q14151;A8MXT5;C9JPX0;F5GXS4 Q14151 389 398 SAFB2 Scaffold attachment factor B2 yes no 3 0.014708 89.679 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1959700 0 643960 0 490040 0 825680 1353 1097 1373 6166;6167;6168;6169 4164;4165 4164 2 DILETHLR ALKMSPYKDILETHLR DILETHLREKITAQSI K D I L R E 0 1 0 1 0 0 1 0 1 1 2 0 0 0 0 0 1 0 0 0 0 8 0 995.53999 P78527;E7EUY0;P78527-2 P78527 1413 1420 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.0064467 95.909 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 16418000 0 0 0 0 4630400 11788000 1354 1012 1374 6170;6171 4166;4167 4167 2 DILETHLREK ALKMSPYKDILETHLR LETHLREKITAQSIEE K D I E K I 0 1 0 1 0 0 2 0 1 1 2 1 0 0 0 0 1 0 0 0 0 10 1 1252.6776 P78527;E7EUY0;P78527-2 P78527 1413 1422 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 0.0098335 75.387 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 107560000 9497100 12672000 10794000 11450000 25931000 37211000 1355 1012 1375 6172;6173;6174;6175;6176;6177;6178 4168;4169;4170;4171;4172;4173 4173 6 DINSVAIAPNDK TTQRCHDKDINSVAIA VAIAPNDKLLATGSQD K D I D K L 2 0 2 2 0 0 0 0 0 2 0 1 0 0 1 1 0 0 0 1 0 12 0 1255.6408 Q12788 Q12788 481 492 TBL3 Transducin beta-like protein 3 yes yes 2 3.5413E-18 115.37 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 28236000 2462000 5169000 5404900 2323600 3265400 9610600 1356 1058 1376 6179;6180;6181;6182;6183;6184 4174;4175;4176;4177 4175 3 DINTFLGTPVQK KPAVGEEKDINTFLGT FLGTPVQKLDQPGNLP K D I Q K L 0 0 1 1 0 1 0 1 0 1 1 1 0 1 1 0 2 0 0 1 0 12 0 1331.7085 P46013;F5H4V4;P46013-2 P46013 1794 1805 MKI67 Antigen KI-67 no no 2 6.3071E-12 108.68 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 80187000 11603000 0 0 0 68585000 0 1357 919;920 1377 6185;6186 4178;4179 4179 2 DINTFVGTPVEK KAAVGEEKDINTFVGT FVGTPVEKLDLLGNLP K D I E K L 0 0 1 1 0 0 1 1 0 1 0 1 0 1 1 0 2 0 0 2 0 12 0 1318.6769 P46013;F5H4V4;P46013-2 P46013 1916 1927 MKI67 Antigen KI-67 no no 2 0 226.33 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 888330000 182740000 143460000 144800000 67506000 117510000 232300000 1358 919;920 1378 6187;6188;6189;6190;6191;6192;6193 4180;4181;4182;4183 4180 3 DIPVTAQPSK PIAEQSSKDIPVTAQP PVTAQPSKDVHVVKEQ K D I S K D 1 0 0 1 0 1 0 0 0 1 0 1 0 0 2 1 1 0 0 1 0 10 0 1054.5659 Q12888;Q12888-2;A6NNK5;F8VY86;C9JXV0 Q12888 235 244 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.040444 53.237 By MS/MS By matching By matching By matching By matching By matching 1 1115300 1115300 0 0 0 0 0 1359 1063 1379 6194 4184 4184 1 DIRPECREDFVLSITGK RLLAKLRKDIRPECRE FVLSITGKKAPGCVLS K D I G K K 0 2 0 2 1 0 2 1 0 2 1 1 0 1 1 1 1 0 0 1 0 17 2 2034.0204 P08651-4;P08651-5;P08651-3;P08651-2;P08651;F8W9H9 P08651-4 74 90 NFIC Nuclear factor 1 C-type yes no 3;4 0.0057094 57.148 By matching By matching By matching By MS/MS By matching By matching 2 182110000 0 0 0 182110000 0 0 1360 563 1380 6195;6196 4185;4186 4185 2 DISAPKPGPLK AAGDKDTKDISAPKPG APKPGPLKKAPAAKAG K D I L K K 1 0 0 1 0 0 0 1 0 1 1 2 0 0 3 1 0 0 0 0 0 11 1 1121.6445 Q14008-2;Q14008;Q14008-3 Q14008-2 534 544 CKAP5 Cytoskeleton-associated protein 5 yes no 2 0.0053791 89.171 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 15603000 1422800 2211800 1967400 2032600 3957800 4010800 1361 1093 1381 6197;6198;6199;6200;6201;6202 4187;4188;4189 4189 3 DISAPNDGTAQR KVVIKKEKDISAPNDG PNDGTAQRTENHGAPA K D I Q R T 2 1 1 2 0 1 0 1 0 1 0 0 0 0 1 1 1 0 0 0 0 12 0 1243.5793 G3V2F4;E7EPD8;Q9NUW8;G3V2J6;G3V2U6;Q9BRS7;G3V4W8;G3V5H9;G3V3Q0;G3V5F9;G3V5B8;G3V554 G3V2F4 115 126 TDP1 Tyrosyl-DNA phosphodiesterase 1 yes no 2 0.0040297 66.267 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 2229500 0 294510 552830 264670 327180 790300 1362 357 1382 6203;6204;6205;6206;6207 4190;4191 4190 2 DISLSDYKGK VMPDGQFKDISLSDYK SLSDYKGKYVVFFFYP K D I G K Y 0 0 0 2 0 0 0 1 0 1 1 2 0 0 0 2 0 0 1 0 0 10 1 1124.5714 Q06830 Q06830 28 37 PRDX1 Peroxiredoxin-1 yes yes 2 0.020458 83.862 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 21203000 2793800 11644000 0 0 6765300 0 1363 1044 1383 6208;6209;6210 4192;4193 4192 2 DISSSLNSLADSNAR VVCLFRRRDISSSLNS SLADSNAREFEEESKQ R D I A R E 2 1 2 2 0 0 0 0 0 1 2 0 0 0 0 5 0 0 0 0 0 15 0 1548.738 O94776 O94776 50 64 MTA2 Metastasis-associated protein MTA2 yes yes 3 0.00030273 85.28 By matching By MS/MS By matching By matching By matching By matching 1 33467000 0 33467000 0 0 0 0 1364 754 1384 6211 4194 4194 1 DISTEMIR HFASRHRKDISTEMIR DISTEMIRTKIAHRKS K D I I R T 0 1 0 1 0 0 1 0 0 2 0 0 1 0 0 1 1 0 0 0 0 8 0 963.46953 A8MTM6;Q15398;G3V4E5;G3V543 A8MTM6 13 20 DLGAP5 Disks large-associated protein 5 yes no 2 0.024023 76.478 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 9379100 874790 1776600 3264000 0 2507500 956160 1365 42 1385 6212;6213;6214;6215;6216 4195 4195 1 DIVENICGR ETTTGYYKDIVENICG IVENICGREKSGIQPL K D I G R E 0 1 1 1 1 0 1 1 0 2 0 0 0 0 0 0 0 0 0 1 0 9 0 1074.5128 P42166 P42166 324 332 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 0.012845 80.755 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 2 1 109240000 4490900 26967000 16130000 6226500 2872200 52552000 1366 913 1386 6217;6218;6219;6220;6221;6222;6223 4196;4197;4198;4199;4200 4197 5 DIVENICGREK ETTTGYYKDIVENICG ENICGREKSGIQPLCP K D I E K S 0 1 1 1 1 0 2 1 0 2 0 1 0 0 0 0 0 0 0 1 0 11 1 1331.6503 P42166 P42166 324 334 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2;3 1.2386E-178 178.53 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 3 2 235800000 6938800 24148000 65704000 36663000 26152000 76194000 1367 913 1387 6224;6225;6226;6227;6228;6229;6230;6231;6232;6233;6234 4201;4202;4203;4204;4205;4206;4207;4208 4206 8 DKALQHMAAMSSAQIVSATAIHNK TSMDQTAKDKALQHMA SATAIHNKLGLPGIPR K D K N K L 6 0 1 1 0 2 0 0 2 2 1 2 2 0 0 3 1 0 0 1 0 24 1 2522.2734 A4FUP2;H0YEJ9;P28347;H0YE88;E9PKB7 A4FUP2 105 128 TEAD1 Transcriptional enhancer factor TEF-1 yes no 4 1.3076E-84 120.33 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 86217000 22355000 0 45652000 18211000 0 0 1368 12 1388 6235;6236;6237 4209;4210;4211;4212 4209 4 DKDAYSSFGSR SSGWSSSKDKDAYSSF AYSSFGSRSDSRGKSS K D K S R S 1 1 0 2 0 0 0 1 0 0 0 1 0 1 0 3 0 0 1 0 0 11 1 1231.5469 O00571;O00571-2;B4DLU5;B4E3C4;B4DXX7;O15523;B4DLA0;C9J081;B4E132;C9J8G5 O00571 65 75 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 2;3 0.019478 64.64 By matching By matching By matching By matching By matching By MS/MS 1 2 2 3869400 0 346850 0 0 1244600 2277900 1369 693 1389 6238;6239;6240;6241;6242 4213;4214 4213 2 DKGFGFIR AGEVFIHKDKGFGFIR DKGFGFIRLETRTLAE K D K I R L 0 1 0 1 0 0 0 2 0 1 0 1 0 2 0 0 0 0 0 0 0 8 1 938.4974 Q15233;F5GYZ3;C9JYS8;H7C367;C9IZL7 Q15233 108 115 NONO Non-POU domain-containing octamer-binding protein yes no 2 0.020725 98.582 By MS/MS By matching By matching By matching By matching By matching 2 17347000 17347000 0 0 0 0 0 1370 1133 1390 6243;6244 4215;4216 4215 2 DKPITFTQHQMPLFRK KYADYISRDKPITFTQ HQMPLFRKKMVWEILH R D K R K K 0 1 0 1 0 2 0 0 1 1 1 2 1 2 2 0 2 0 0 0 0 16 2 1986.0509 B4DQ42;Q9HC62;E7ENF4 B4DQ42 552 567 SENP2 Sentrin-specific protease 2 yes no 4 0.0017424 59.709 By matching By matching By matching By MS/MS By matching By matching 1 2944600 0 0 0 2944600 0 0 1371 115 1391 6245 4217 4217 1 DKPVPLPAPEMTVK EHPIQQERDKPVPLPA PAPEMTVKQERLDFEE R D K V K Q 1 0 0 1 0 0 1 0 0 0 1 2 1 0 4 0 1 0 0 2 0 14 1 1520.8273 H7C128;H7C179;Q9H0E9-4;B5MCW3;H7C127;Q9H0E9-2;Q9H0E9;F8W820;H0YAH7;Q9H0E9-3;H0Y2L9 H7C128 462 475 BRD8 Bromodomain-containing protein 8 yes no 3 0.0044399 57.788 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 9139700 0 2584400 0 0 0 6555300 1372 171 1392 6246;6247 4218;4219 4218 2 DKPVTGEQIEVFANK NESPDVRRDKPVTGEQ QIEVFANKLGEQWKIL R D K N K L 1 0 1 1 0 1 2 1 0 1 0 2 0 1 1 0 1 0 0 2 0 15 1 1673.8625 Q96FV9 Q96FV9 566 580 THOC1 THO complex subunit 1 yes yes 3 7.3651E-05 75.02 By matching By MS/MS By matching By matching By matching By matching 1 1 3391100 0 1150000 0 0 0 2241100 1373 1386 1393 6248;6249 4220 4220 0 DKQPNAQPQYLHGSK PFSQEFQRDKQPNAQP PQYLHGSKALNLAYSS R D K S K A 1 0 1 1 0 3 0 1 1 0 1 2 0 0 2 1 0 0 1 0 0 15 1 1709.8485 Q7L576;E7EQ04;Q7L576-3;Q7L576-2 Q7L576 878 892 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes no 3 0.016598 44.252 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1849900 0 273390 162970 0 470450 943110 1374 359 1394 6250;6251;6252;6253 4221;4222 4221 2 DKSTTPGGTGIKPFLER ICLQSQSKDKSTTPGG GIKPFLERFGERCQEH K D K E R F 0 1 0 1 0 0 1 3 0 1 1 2 0 1 2 1 3 0 0 0 0 17 2 1802.9527 Q9NQW6;Q9NQW6-2 Q9NQW6 360 376 ANLN Actin-binding protein anillin yes no 3;4 0.0013906 59.15 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 11852000 254910 1860600 3641400 2477400 0 3618100 1375 1533 1395 6254;6255;6256;6257;6258 4223;4224 4224 2 DKVNCSFYFK ASIFGTEKDKVNCSFY VNCSFYFKIGACRHGD K D K F K I 0 0 1 1 1 0 0 0 0 0 0 2 0 2 0 1 0 0 1 1 0 10 1 1306.6016 Q01081-3;Q8WU68-3;Q8WU68-2;Q8WU68;Q01081-2;Q01081 Q01081-3 14 23 U2AF1;U2AF1L4 Splicing factor U2AF 35 kDa subunit;Splicing factor U2AF 26 kDa subunit yes no 2 0.021831 83.226 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 17853000 2050900 4250500 1971900 1182800 2380300 6016700 1376 1024 1396 6259;6260;6261;6262;6263;6264 4225;4226;4227 4226 3 DKVQAGDVITIDKATGK KMIESLTKDKVQAGDV TIDKATGKISKLGRSF K D K G K I 2 0 0 3 0 1 0 2 0 2 0 3 0 0 0 0 2 0 0 2 0 17 2 1757.9523 Q9Y230;B3KQ59 Q9Y230 185 201 RUVBL2 RuvB-like 2 yes no 3 0.0014067 51.942 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3053800 0 893180 0 0 744740 1415900 1377 1627 1397 6265;6266;6267 4228 4228 0 DLAGSIIGK TTQVTIPKDLAGSIIG LAGSIIGKGGQRIKQI K D L G K G 1 0 0 1 0 0 0 2 0 2 1 1 0 0 0 1 0 0 0 0 0 9 0 872.49673 P61978-3;P61978-2;B4DFF1;P61978;Q5T6W5 P61978-3 373 381 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 1;2 0.007188 73.248 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 10577000 0 0 5035800 0 2343900 3197500 1378 984 1398 6268;6269;6270 4229;4230 4230 2 DLAGSIIGKGGQR TTQVTIPKDLAGSIIG IIGKGGQRIKQIRHES K D L Q R I 1 1 0 1 0 1 0 4 0 2 1 1 0 0 0 1 0 0 0 0 0 13 1 1270.6993 P61978-3;P61978-2;B4DFF1;P61978;Q5T6W5 P61978-3 373 385 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2;3 2.2346E-74 142.12 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 3 2 3 97200000 8198800 20526000 10516000 6267100 10210000 41483000 1379 984 1399 6271;6272;6273;6274;6275;6276;6277;6278;6279;6280;6281;6282;6283;6284;6285 4231;4232;4233;4234;4235;4236;4237;4238;4239 4239 9 DLAGSIIGKGGQRIK TTQVTIPKDLAGSIIG GKGGQRIKQIRHESGA K D L I K Q 1 1 0 1 0 1 0 4 0 3 1 2 0 0 0 1 0 0 0 0 0 15 2 1511.8784 P61978-3;P61978-2;B4DFF1;P61978;Q5T6W5 P61978-3 373 387 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 3 5.8361E-08 97.463 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 45084000 6952000 10465000 9489100 3544700 0 14633000 1380 984 1400 6286;6287;6288;6289;6290 4240;4241;4242;4243 4240 4 DLANLEVPHELPTK MLALLKRKDLANLEVP VPHELPTKQDGSGVKG K D L T K Q 1 0 1 1 0 0 2 0 1 0 3 1 0 0 2 0 1 0 0 1 0 14 0 1574.8304 Q8WXI9 Q8WXI9 53 66 GATAD2B Transcriptional repressor p66-beta yes yes 2 0.0082926 52.372 By matching By MS/MS By matching By matching By matching By matching 1 21199000 0 21199000 0 0 0 0 1381 1344 1401 6291 4244 4244 1 DLANLEVPHELPTKQDGSGVK MLALLKRKDLANLEVP KQDGSGVKGYEEKLNG K D L V K G 1 0 1 2 0 1 2 2 1 0 3 2 0 0 2 1 1 0 0 2 0 21 1 2246.1543 Q8WXI9 Q8WXI9 53 73 GATAD2B Transcriptional repressor p66-beta yes yes 4 6.759E-06 76.118 By matching By MS/MS By matching By matching By matching By matching 1 1 15925000 0 14266000 0 1658400 0 0 1382 1344 1402 6292;6293 4245 4245 1 DLANLEVPHELPTKQDGSGVKGYEEK MLALLKRKDLANLEVP GVKGYEEKLNGNLRPH K D L E K L 1 0 1 2 0 1 4 3 1 0 3 3 0 0 2 1 1 0 1 2 0 26 2 2852.4192 Q8WXI9 Q8WXI9 53 78 GATAD2B Transcriptional repressor p66-beta yes yes 4 2.8804E-13 74.408 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 270390000 0 9978700 35454000 0 0 224960000 1383 1344 1403 6294;6295;6296 4246;4247;4248;4249 4247 4 DLATVAFCDAQSTQEIHEK TVEMPILKDLATVAFC STQEIHEKVLNEAVGA K D L E K V 3 0 0 2 1 2 2 0 1 1 1 1 0 1 0 1 2 0 0 1 0 19 0 2161.995 P56545;Q5SQP8;P56545-2 P56545 53 71 CTBP2 C-terminal-binding protein 2 yes no 3 7.8075E-07 88.486 By matching By matching By matching By MS/MS By matching By matching 1 16510000 0 0 0 16510000 0 0 1384 973 1404 6297 4250 4250 1 DLCNTHLMR EGWKLLKKDLCNTHLM LCNTHLMRVLVQTLCE K D L M R V 0 1 1 1 1 0 0 0 1 0 2 0 1 0 0 0 1 0 0 0 0 9 0 1158.5274 P78527;E7EUY0;P78527-2 P78527 1362 1370 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.016616 72.928 By matching By matching By matching By matching By matching By MS/MS 1 1 3475600 0 0 0 0 1603900 1871700 1385 1012 1405 6298;6299 4251 4251 1 DLDELSRYPEDK ASFGLSARDLDELSRY LSRYPEDKITPENLPQ R D L D K I 0 1 0 3 0 0 2 0 0 0 2 1 0 0 1 1 0 0 1 0 0 12 1 1478.6889 P43243;A8MXP9;D6REM6;D6R991 P43243 121 132 MATR3 Matrin-3 yes no 2;3 2.3556E-79 147.26 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 2 2 33370000 4263600 8224100 3262500 2066600 6344600 9208400 1386 52 1406 6300;6301;6302;6303;6304;6305;6306;6307;6308;6309;6310;6311 4252;4253;4254;4255;4256;4257;4258;4259;4260 4256 8 DLDFAQQK MSKKKKPKDLDFAQQK DLDFAQQKLTDKNLGF K D L Q K L 1 0 0 2 0 2 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 8 0 963.46616 Q8IX01-4;Q8IX01-3;Q8IX01;E7ETX7 Q8IX01-4 949 956 SUGP2 SURP and G-patch domain-containing protein 2 yes no 2 0.014957 86.794 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2647000 0 0 255740 0 808190 1583100 1387 1284 1407 6312;6313;6314 4261 4261 1 DLDNAGELGR NTRRATQRDLDNAGEL DNAGELGRSRGEQEGD R D L G R S 1 1 1 2 0 0 1 2 0 0 2 0 0 0 0 0 0 0 0 0 0 10 0 1058.4993 B9ZVN9;O95602 B9ZVN9 1376 1385 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 yes no 2 0.008629 80.737 By matching By matching By matching By matching By matching By MS/MS 1 1 3013100 0 0 0 0 1124200 1888900 1388 218 1408 6315;6316 4262 4262 1 DLDPNNVIIEQEER VVNQGTGKDLDPNNVI VIIEQEERRRRSFQDY K D L E R R 0 1 2 2 0 1 3 0 0 2 1 0 0 0 1 0 0 0 0 1 0 14 0 1682.8111 Q9NP64-2;B4DY38;Q9NP64;E7EPF0 Q9NP64-2 73 86 ZCCHC17 Nucleolar protein of 40 kDa yes no 2 0.0050999 56.527 By matching By MS/MS By matching By matching By matching By matching 1 5899100 0 5899100 0 0 0 0 1389 141 1409 6317 4263 4263 1 DLEAFNPESK SLLFSCSKDLEAFNPE EAFNPESKELLDLVEF K D L S K E 1 0 1 1 0 0 2 0 0 0 1 1 0 1 1 1 0 0 0 0 0 10 0 1148.535 Q6W2J9;Q6W2J9-4;Q6W2J9-2;A6NE70 Q6W2J9 1712 1721 BCOR BCL-6 corepressor yes no 2 0.0086058 81.017 By matching By MS/MS By matching By matching By matching By matching 1 1 1222400 0 831250 0 0 0 391150 1390 1237 1410 6318;6319 4264 4264 1 DLEIERLK LMKTVEEKDLEIERLK DLEIERLKTKQKELEA K D L L K T 0 1 0 1 0 0 2 0 0 1 2 1 0 0 0 0 0 0 0 0 0 8 1 1014.571 Q14807;B7Z265;H3BRB3 Q14807 479 486 KIF22 Kinesin-like protein KIF22 yes no 2 3.3387E-24 131.22 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 15504000 758250 2672000 3241700 2046400 0 6786100 1391 1115 1411 6320;6321;6322;6323;6324 4265;4266;4267 4266 3 DLEIERLKTK LMKTVEEKDLEIERLK EIERLKTKQKELEAKM K D L T K Q 0 1 0 1 0 0 2 0 0 1 2 2 0 0 0 0 1 0 0 0 0 10 2 1243.7136 Q14807;B7Z265;H3BRB3 Q14807 479 488 KIF22 Kinesin-like protein KIF22 yes no 3 0.027074 80.231 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 17776000 998450 3781700 5166300 1686100 1707000 4436600 1392 1115 1412 6325;6326;6327;6328;6329;6330 4268;4269 4269 2 DLEPGPSGTSK LGEDDEDKDLEPGPSG PGPSGTSKASAQISGQ K D L S K A 0 0 0 1 0 0 1 2 0 0 1 1 0 0 2 2 1 0 0 0 0 11 0 1086.5193 Q92797;Q92797-3;Q92797-2 Q92797 374 384 SYMPK Symplekin yes no 2 0.020141 55.721 By matching By MS/MS By matching By matching By matching By matching 1 366650 0 366650 0 0 0 0 1393 1360 1413 6331 4270 4270 1 DLERHVLVHTGEKPFPCLECGK EKLFRSPRDLERHVLV FPCLECGKFFRHECYL R D L G K F 0 1 0 1 2 0 3 2 2 0 3 2 0 1 2 0 1 0 0 2 0 22 2 2620.289 Q96SL8 Q96SL8 428 449 FIZ1 Flt3-interacting zinc finger protein 1 yes yes 4 2.3912E-06 67.668 By matching By matching By matching By matching By matching By MS/MS 1 24821000 0 0 0 0 0 24821000 1394 1419 1414 6332 4271 4271 1 DLFVPRPVLR KADVSAWKDLFVPRPV FVPRPVLRALSFLGFS K D L L R A 0 2 0 1 0 0 0 0 0 0 2 0 0 1 2 0 0 0 0 2 0 10 1 1210.7186 G3V529;Q9GZR7;F5H4J5 G3V529 153 162 DDX24 ATP-dependent RNA helicase DDX24 yes no 3 0.0093275 76.679 By matching By matching By matching By matching By MS/MS By matching 1 16048000 0 0 0 0 16048000 0 1395 588 1415 6333 4272 4272 1 DLGEEHFK SEIAHRFKDLGEEHFK DLGEEHFKGLVLIAFS K D L F K G 0 0 0 1 0 0 2 1 1 0 1 1 0 1 0 0 0 0 0 0 0 8 0 973.45051 CON__P02769 CON__P02769 37 44 yes yes 2 5.774E-05 115.49 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 136220000 23605000 36410000 21828000 6245900 0 48127000 + 1396 294 1416 6334;6335;6336;6337;6338 4273;4274;4275;4276;4277 4274 5 DLGEELEALKTELEDTLDSTAAQQELR NKAEKQKRDLGEELEA TAAQQELRSKREQEVN R D L L R S 3 1 0 3 0 2 6 1 0 0 6 1 0 0 0 1 3 0 0 0 0 27 1 3016.4724 P35579 P35579 1136 1162 MYH9 Myosin-9 yes yes 3 8.811E-10 56.234 By MS/MS By matching By matching By matching By matching By matching 1 0 0 0 0 0 0 0 1397 900 1417 6339 4278 4278 1 DLGLDPGKQIK STLISAARDLGLDPGK LDPGKQIKLDSSAQFG R D L I K L 0 0 0 2 0 1 0 2 0 1 2 2 0 0 1 0 0 0 0 0 0 11 1 1182.6608 B4E2Z2;P43246;E9PHA6;E7EU21;B4DL39;B4DSB9 B4E2Z2 436 446 MSH2 DNA mismatch repair protein Msh2 yes no 2 3.5349E-29 126.03 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 7046800 498850 0 745490 202370 0 5600100 1398 162 1418 6340;6341;6342;6343 4279 4279 1 DLIAQARTGTGK FHHVYSGKDLIAQART QARTGTGKTFSFAIPL K D L G K T 2 1 0 1 0 1 0 2 0 1 1 1 0 0 0 0 2 0 0 0 0 12 1 1229.6728 Q9NR30;Q9NR30-2;F5H3H6;Q9BQ39 Q9NR30 225 236 DDX21;DDX50 Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 no no 2;3 0.011541 57.885 By MS/MS By matching By matching By MS/MS By MS/MS By matching 2 2 2 2 2 11229000 2665800 1965700 2063500 2662200 1871500 0 1399 1534;515 1419 6344;6345;6346;6347;6348;6349;6350;6351;6352;6353 4280;4281;4282;4283 4282 4 DLIRTAVGQTR LDIPDDAKDLIRTAVG RTAVGQTRLLMKERFK K D L T R L 1 2 0 1 0 1 0 1 0 1 1 0 0 0 0 0 2 0 0 1 0 11 1 1228.6888 A8MTM6;Q15398;Q15398-1 A8MTM6 465 475 DLGAP5 Disks large-associated protein 5 yes no 3 0.0099066 65.232 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5650100 0 514030 377890 3798700 0 959510 1400 42 1420 6354;6355;6356;6357 4284 4284 1 DLKEIQHHLK PLQNLCEKDLKEIQHH KEIQHHLKKLEGRRLD K D L L K K 0 0 0 1 0 1 1 0 2 1 2 2 0 0 0 0 0 0 0 0 0 10 1 1259.6986 Q99961;E7EVZ4 Q99961 150 159 SH3GL1 Endophilin-A2 yes no 3 0.024104 60.598 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 3063400 0 502810 801850 263730 666110 828880 1401 1435 1421 6358;6359;6360;6361;6362 4285 4285 1 DLLMNDRSTGEK VVANFIVKDLLMNDRS NDRSTGEKNGKLWSPD K D L E K N 0 1 1 2 0 0 1 1 0 0 2 1 1 0 0 1 1 0 0 0 0 12 1 1377.6558 Q29RF7;H0Y9L6 Q29RF7 806 817 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 2 0.018363 62.088 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 7424300 791060 1341400 1880800 956460 0 2454600 1402 1159 1422 6363;6364;6365;6366;6367 4286;4287;4288 4286 3 DLLRHDPDLHMHQGYDK PKNPVKRKDLLRHDPD HMHQGYDKYDVSEFCS K D L D K Y 0 1 0 4 0 1 0 1 3 0 3 1 1 0 1 0 0 0 1 0 0 17 1 2088.98 Q69YH5;E9PEI0 Q69YH5 637 653 CDCA2 Cell division cycle-associated protein 2 yes no 4 0.0014858 74.338 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4248300 0 0 1957700 0 298030 1992500 1403 1219 1423 6368;6369;6370 4289 4289 1 DLLRLSYGEAK LCSFRYRRDLLRLSYG RLSYGEAKKAARDYET R D L A K K 1 1 0 1 0 0 1 1 0 0 3 1 0 0 0 1 0 0 1 0 0 11 1 1263.6823 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 1176 1186 ADAR Double-stranded RNA-specific adenosine deaminase no no 2;3 3.6703E-177 175.48 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 488100000 116000000 45079000 75964000 49669000 133630000 67753000 1404 352;968 1424 6371;6372;6373;6374;6375;6376;6377;6378;6379;6380;6381;6382 4290;4291;4292;4293;4294;4295;4296;4297;4298;4299;4300;4301 4296 12 DLLRLSYGEAKK LCSFRYRRDLLRLSYG LSYGEAKKAARDYETA R D L K K A 1 1 0 1 0 0 1 1 0 0 3 2 0 0 0 1 0 0 1 0 0 12 2 1391.7773 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 1176 1187 ADAR Double-stranded RNA-specific adenosine deaminase no no 3 0.0045192 91.093 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 49150000 5532300 3253100 6105500 2716700 8917600 22624000 1405 352;968 1425 6383;6384;6385;6386;6387;6388 4302;4303;4304 4303 3 DLMACAQTGSGK IPIIKEKRDLMACAQT CAQTGSGKTAAFLLPI R D L G K T 2 0 0 1 1 1 0 2 0 0 1 1 1 0 0 1 1 0 0 0 0 12 0 1237.5431 O00571;O00571-2;B4DLU5;B4DXX7;O15523;C9J081;D6RCM4;E9PCD8;Q9NQI0-2;D6RDK4;Q9NQI0;H0Y960 O00571 219 230 DDX3X;DDX3Y;DDX4 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX4 yes no 2 0.0038962 67.118 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 5082300 1598300 0 0 1379100 2104900 0 1406 693 1426 6389;6390;6391 4305;4306;4307 4305 3 DLPAGRHSHAVSTAAMTR RLSSPSIKDLPAGRHS VSTAAMTRSSVGAGEP K D L T R S 4 2 0 1 0 0 0 1 2 0 1 0 1 0 1 2 2 0 0 1 0 18 1 1876.9326 A6NEM2;P51610-2;P51610 A6NEM2 1227 1244 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 3;4 0.00181 56.121 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 2 2 2 19301000 0 3401100 4000300 1534100 3454000 6911900 1407 18 1427 6392;6393;6394;6395;6396;6397;6398;6399;6400;6401 4308;4309;4310;4311;4312 4309 5 DLPEHAVLK KKAEVEGKDLPEHAVL LPEHAVLKMKGNFTLP K D L L K M 1 0 0 1 0 0 1 0 1 0 2 1 0 0 1 0 0 0 0 1 0 9 0 1020.5604 Q00839;B3KX72;Q00839-2 Q00839 627 635 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 2 0.0077976 101.9 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 67813000 4928000 0 10590000 6694600 17682000 27919000 1408 1022;1023 1428 6402;6403;6404;6405;6406 4313;4314;4315 4313 3 DLPEHAVLKMK KKAEVEGKDLPEHAVL EHAVLKMKGNFTLPEV K D L M K G 1 0 0 1 0 0 1 0 1 0 2 2 1 0 1 0 0 0 0 1 0 11 1 1279.6958 Q00839;B3KX72;Q00839-2 Q00839 627 637 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 3 0.0046665 76.228 By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 1 1 1 1 17602000 2194900 2768600 2490900 2179600 2165600 5802400 1409 1022;1023 1429 6407;6408;6409;6410;6411;6412;6413 4316;4317;4318 4317 3 DLPNGDIDEYEK KSHKSRRKDLPNGDID GDIDEYEKKSKRVSSL K D L E K K 0 0 1 3 0 0 2 1 0 1 1 1 0 0 1 0 0 0 1 0 0 12 0 1406.6202 F5H3H6;Q9BQ39 F5H3H6 95 106 DDX50 ATP-dependent RNA helicase DDX50 yes no 2 0.0018202 82.069 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 7173000 0 0 2068600 1163500 2124800 1816100 1410 515 1430 6414;6415;6416;6417 4319;4320 4320 2 DLQDELAGNSEQRK TKLELKAKDLQDELAG AGNSEQRKRLLKERQK K D L R K R 1 1 1 2 0 2 2 1 0 0 2 1 0 0 0 1 0 0 0 0 0 14 1 1601.7645 Q9UQE7 Q9UQE7 311 324 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.00061011 84.734 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 8299800 570390 2286600 0 0 1721600 3721200 1411 1625 1431 6418;6419;6420;6421 4321 4321 1 DLQNFLK EFKELVRKDLQNFLKK KDLQNFLKKENKNEKV K D L L K K 0 0 1 1 0 1 0 0 0 0 2 1 0 1 0 0 0 0 0 0 0 7 0 876.47052 P06702 P06702 44 50 S100A9 Protein S100-A9 yes yes 2 0.0078714 97.473 By matching By MS/MS By matching By matching By matching By matching 1 6081500 0 6081500 0 0 0 0 1412 800 1432 6422 4322 4322 1 DLQQQLVDAK IDKVFKHKDLQQQLVD QQQLVDAKLQQAQEML K D L A K L 1 0 0 2 0 3 0 0 0 0 2 1 0 0 0 0 0 0 0 1 0 10 0 1156.6088 P40222 P40222 331 340 TXLNA Alpha-taxilin yes yes 2 2.9529E-35 135.8 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 22393000 1663700 2254500 1776000 1003400 7363000 8332200 1413 907 1433 6423;6424;6425;6426;6427;6428 4323;4324;4325;4326;4327 4324 5 DLRGHVELSEAR HGGRMFLKDLRGHVEL HVELSEARLRDVLQRA K D L A R L 1 2 0 1 0 0 2 1 1 0 2 0 0 0 0 1 0 0 0 1 0 12 1 1380.711 Q96H79;Q96H79-2 Q96H79 25 36 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes no 3 3.2975E-37 126.12 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 67850000 4691300 7581200 8053700 6034800 11246000 30244000 1414 1390 1434 6429;6430;6431;6432;6433;6434 4328;4329;4330;4331;4332 4330 5 DLSEVSETTESTDVK EDSGGDSKDLSEVSET TTESTDVKDSSEASDS K D L V K D 0 0 0 2 0 0 3 0 0 0 1 1 0 0 0 3 3 0 0 2 0 15 0 1638.7472 A6NM98;P41227 A6NM98 196 210 NAA10 N-alpha-acetyltransferase 10 yes no 2 8.9416E-83 131.86 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 10005000 0 3470500 0 0 0 6534300 1415 29 1435 6435;6436;6437 4333;4334;4335;4336 4333 4 DLSLENGAHAYNR KVKSLLNKDLSLENGA NGAHAYNREVNGRLEN K D L N R E 2 1 2 1 0 0 1 1 1 0 2 0 0 0 0 1 0 0 1 0 0 13 0 1458.6852 F5GX68 F5GX68 89 101 DNMT1 Cytosine-specific methyltransferase no no 3 0.0011643 75.739 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4063200 0 1212600 889310 0 540590 1420700 1416 487 1436 6438;6439;6440;6441 4337;4338 4337 2 DLTERGLWHEEMK IVNPHLLKDLTERGLW GLWHEEMKNQIIACNG K D L M K N 0 1 0 1 0 0 3 1 1 0 2 1 1 0 0 0 1 1 0 0 0 13 1 1642.7773 P23921;H0YFI0;E9PD78;E9PL69;F5H861 P23921 644 656 RRM1 Ribonucleoside-diphosphate reductase large subunit;Ribonucleoside-diphosphate reductase yes no 3 0.0045635 62.088 By matching By matching By matching By matching By matching By MS/MS 1 1 2647700 0 362490 0 0 0 2285200 1417 870 1437 6442;6443 4339 4339 1 DLTIPESSTVK GRPPKDEKDLTIPESS IPESSTVKGMMAGPMA K D L V K G 0 0 0 1 0 0 1 0 0 1 1 1 0 0 1 2 2 0 0 1 0 11 0 1188.6238 Q49A26-2;Q49A26;Q49A26-3;Q49A26-4 Q49A26-2 180 190 GLYR1 Putative oxidoreductase GLYR1 yes no 2 0.0018545 90.05 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 71578000 11508000 0 10018000 4867900 16982000 28203000 1418 1168 1438 6444;6445;6446;6447;6448 4340;4341;4342 4341 3 DLTTAGAVTQCYR HNMYREYRDLTTAGAV GAVTQCYRDMGARHRA R D L Y R D 2 1 0 1 1 1 0 1 0 0 1 0 0 0 0 0 3 0 1 1 0 13 0 1454.6824 B4DM74;Q02543 B4DM74 99 111 RPL18A 60S ribosomal protein L18a yes no 2 0.032828 68.171 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 1419 104 1439 6449 4343 4343 1 DLTYSCRDNK FFKRTIRKDLTYSCRD TYSCRDNKDCTVDKRQ K D L N K D 0 1 1 2 1 0 0 0 0 0 1 1 0 0 0 1 1 0 1 0 0 10 1 1270.5612 F8VZR5;F8VNP5;P28702;Q5STQ1;E9PK95;B7Z3E4 F8VZR5 97 106 RXRB Retinoic acid receptor RXR-beta yes no 2 0.008383 90.149 By matching By matching By MS/MS By matching By matching By matching 1 371690 0 0 371690 0 0 0 1420 533 1440 6450 4344 4344 1 DLTYSCRDNKDCTVDK FFKRTIRKDLTYSCRD NKDCTVDKRQRNRCQY K D L D K R 0 1 1 4 2 0 0 0 0 0 1 2 0 0 0 1 2 0 1 1 0 16 2 1988.8568 F8VZR5;F8VNP5;P28702;Q5STQ1;E9PK95;B7Z3E4 F8VZR5 97 112 RXRB Retinoic acid receptor RXR-beta yes no 3 1.8497E-06 91.712 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 2 1 1 1 75343000 8714400 11245000 19073000 10147000 11033000 15131000 1421 533 1441 6451;6452;6453;6454;6455;6456;6457 4345;4346;4347 4347 3 DLVAQAPLKPK LPLATIVKDLVAQAPL AQAPLKPKTPRGTKTP K D L P K T 2 0 0 1 0 1 0 0 0 0 2 2 0 0 2 0 0 0 0 1 0 11 1 1178.7023 O94776;Q68DB1 O94776 523 533 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 2 0.0031291 92.611 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 12305000 0 2884200 1361300 0 0 8059200 1422 754 1442 6458;6459;6460 4348;4349;4350;4351 4349 4 DLVAQAPLKPKTPR LPLATIVKDLVAQAPL PLKPKTPRGTKTPINR K D L P R G 2 1 0 1 0 1 0 0 0 0 2 2 0 0 3 0 1 0 0 1 0 14 2 1532.9039 O94776;Q68DB1 O94776 523 536 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 3 0.01157 58.885 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 61534000 0 312100 17562000 449980 1078900 42131000 1423 754 1443 6461;6462;6463;6464;6465 4352 4352 1 DLVVLLFETALLSSGFSLEDPQTHSNR DKNDKAVKDLVVLLFE DPQTHSNRIYRMIKLG K D L N R I 1 1 1 2 0 1 2 1 1 0 6 0 0 2 1 4 2 0 0 2 0 27 0 2987.524 P08238 P08238 653 679 HSP90AB1 Heat shock protein HSP 90-beta yes yes 3 2.6253E-06 58.802 By matching By matching By MS/MS By matching By matching By matching 1 6403100 0 0 6403100 0 0 0 1424 805 1444 6466 4353 4353 1 DLYTTGRRESVNLGK SPQKHKNKDLYTTGRR RESVNLGKSEGFKAGD K D L G K S 0 2 1 1 0 0 1 2 0 0 2 1 0 0 0 1 2 0 1 1 0 15 2 1707.8904 P46013;F5H4V4 P46013 365 379 MKI67 Antigen KI-67 yes no 3 0.014195 53.947 By matching By matching By MS/MS By matching By matching By matching 1 1 1 49502000 0 16560000 23189000 9752800 0 0 1425 919 1445 6467;6468;6469 4354 4354 1 DMAAPGTSSVPAPTAGNAEK FNSKKRVKDMAAPGTS PTAGNAEKLEIAKRLA K D M E K L 5 0 1 1 0 0 1 2 0 0 0 1 1 0 3 2 2 0 0 1 0 20 0 1870.8731 Q7L014 Q7L014 829 848 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 2 0.035281 33.667 By matching By matching By MS/MS By matching By matching By matching 1 1 1886700 0 0 823560 1063200 0 0 1426 1243 1446 6470;6471 4355 4355 1 DMAEMQRVWKEK MKLHQQERDMAEMQRV MQRVWKEKFEQAEKRK R D M E K F 1 1 0 1 0 1 2 0 0 0 0 2 2 0 0 0 0 1 0 1 0 12 2 1549.7381 Q15058 Q15058 761 772 KIF14 Kinesin-like protein KIF14 yes yes 2 0.0010076 92.112 By MS/MS By matching By matching By matching By matching By matching 1 19751000 19751000 0 0 0 0 0 1427 1128 1447 6472 4356 4356 140 1 DMAQSIYRPSKNLDK DQAWRGGKDMAQSIYR RPSKNLDKDMYGDDLE K D M D K D 1 1 1 2 0 1 0 0 0 1 1 2 1 0 1 2 0 0 1 0 0 15 2 1764.8829 Q13573;G3V3A4;G3V4X8 Q13573 442 456 SNW1 SNW domain-containing protein 1 yes no 3 6.1813E-15 99.991 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 10138000 1513200 0 2228200 1434300 1670500 3291400 1428 583 1448 6473;6474;6475;6476;6477;6478 4357;4358;4359 4359 3 DMEIAQTQK EATPVPIKDMEIAQTQ MEIAQTQKGISEDSHL K D M Q K G 1 0 0 1 0 2 1 0 0 1 0 1 1 0 0 0 1 0 0 0 0 9 0 1062.5016 E7EVA0;P27816-6;P27816 E7EVA0 608 616 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.022182 68.626 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 3348100 711630 725620 1053400 0 857360 0 1429 388 1449 6479;6480;6481;6482 4360;4361 4360 2 DMELPTEK ESDMALVKDMELPTEK DMELPTEKEVALVKDV K D M E K E 0 0 0 1 0 0 2 0 0 0 1 1 1 0 1 0 1 0 0 0 0 8 0 961.44265 E7EVA0;P27816-6;P27816;P27816-2;P27816-5;B9ZVR1;H7C456 E7EVA0 322 329 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.0063494 101.25 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 2 1 1 1 11656000 3109800 1441300 0 2150300 4954800 0 1430 388 1450 6483;6484;6485;6486;6487 4362;4363;4364;4365;4366 4363 5 DMESPTKLDVTLAK KTEVALAKDMESPTKL KLDVTLAKDMQPSMES K D M A K D 1 0 0 2 0 0 1 0 0 0 2 2 1 0 1 1 2 0 0 1 0 14 1 1546.7913 E7EVA0;P27816-6;P27816;P27816-2;P27816-5;B9ZVR1;H7C456 E7EVA0 294 307 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.0011281 74.475 By matching By MS/MS By matching By matching By matching By matching 1 1 4022400 0 1406300 0 2616200 0 0 1431 388 1451 6488;6489 4367 4367 1 DMGYGNWISKPQEEK NYFKKGLKDMGYGNWI ISKPQEEKNFYLCPV_ K D M E K N 0 0 1 1 0 1 2 2 0 1 0 2 1 0 1 1 0 1 1 0 0 15 1 1780.809 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 1205 1219 ADAR Double-stranded RNA-specific adenosine deaminase no no 2;3 0 218.63 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 2 2 170540000 39815000 251550 36533000 5742000 16277000 71921000 1432 352;968 1452 6490;6491;6492;6493;6494;6495;6496;6497;6498;6499 4368;4369;4370;4371;4372;4373;4374;4375 4371 8 DMPIQAFLLYQEPVLGPVRGPFPIIV KAVPYPQRDMPIQAFL RGPFPIIV________ R D M I V - 1 1 0 1 0 2 1 2 0 3 3 0 1 2 5 0 0 0 1 3 0 26 1 2908.5925 CON__P02666 CON__P02666 184 209 yes yes 3 9.2062E-05 53.998 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 45556000 0 18757000 0 0 0 26799000 + 1433 290 1453 6500;6501 4376;4377 4376 2 DMPLSSDGNPKVNEK EATSPGAKDMPLSSDG GNPKVNEKTVGVIVSR K D M E K T 0 0 2 2 0 0 1 1 0 0 1 2 1 0 2 2 0 0 0 1 0 15 1 1629.7668 Q9UGU0-2;Q9UGU0 Q9UGU0-2 588 602 TCF20 Transcription factor 20 yes no 3 0.0042544 54.898 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 3639500 761180 0 967450 766310 0 1144600 1434 1591 1454 6502;6503;6504;6505 4378;4379;4380 4379 3 DMRQTVAVGVIK PLGRFAVRDMRQTVAV TVAVGVIKAVDKKAAG R D M I K A 1 1 0 1 0 1 0 1 0 1 0 1 1 0 0 0 1 0 0 3 0 12 1 1315.7282 Q5VTE0;P68104;Q6IQ15;Q05639 Q5VTE0 428 439 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2;3 3.8986E-10 107.09 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 2 98496000 12273000 15428000 13842000 6019700 1705500 49228000 1435 1006 1455 6506;6507;6508;6509;6510;6511;6512;6513;6514;6515;6516 4381;4382;4383;4384;4385;4386;4387;4388 4388 8 DMRQTVAVGVIKAVDK PLGRFAVRDMRQTVAV GVIKAVDKKAAGAGKV R D M D K K 2 1 0 2 0 1 0 1 0 1 0 2 1 0 0 0 1 0 0 4 0 16 2 1728.9556 Q5VTE0;P68104;Q6IQ15 Q5VTE0 428 443 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 3;4 4.4612E-64 130.64 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 3 2 2 2764800000 420980000 562800000 256820000 286840000 972690000 264680000 1436 1006 1456;1457 6517;6518;6519;6520;6521;6522;6523;6524;6525;6526;6527 4389;4390;4391;4392;4393;4394;4395;4396;4397 4397 119 8 DMSALVAAR ILRDHICKDMSALVAA MSALVAARMRHIPLAP K D M A R M 3 1 0 1 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 1 0 9 0 932.47495 F5GX68 F5GX68 1416 1424 DNMT1 Cytosine-specific methyltransferase no no 2 0.026416 66.299 By MS/MS By matching By matching By matching By matching By MS/MS 2 1 1 1 1 19207000 2269300 0 3261900 1731100 3196500 8747900 1437 487 1458 6528;6529;6530;6531;6532;6533 4398;4399 4399 2 DMSMLEER LIGNLSEKDMSMLEER DMSMLEERIKRSAKRP K D M E R I 0 1 0 1 0 0 2 0 0 0 1 0 2 0 0 1 0 0 0 0 0 8 0 1009.4209 Q14008-2;Q14008;Q14008-3;H0YEK7 Q14008-2 1412 1419 CKAP5 Cytoskeleton-associated protein 5 yes no 2 0.034579 69.812 By matching By matching By matching By matching By matching By MS/MS 1 1 2811300 0 0 0 0 721700 2089600 1438 1093 1459 6534;6535 4400 4400 1 DMTAQFNNLGVLHVTKK CAVSVGPKDMTAQFNN GVLHVTKKNMMGTMIQ K D M K K N 1 0 2 1 0 1 0 1 1 0 2 2 1 1 0 0 2 0 0 2 0 17 1 1914.9986 Q00653-3;Q00653-4;Q00653 Q00653-3 128 144 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes no 3 1.7509E-05 84.859 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 1439 1021 1460 6536 4401 4401 1 DMTHWRQNTEK QENLRWRKDMTHWRQN HWRQNTEKLDKSRAEI K D M E K L 0 1 1 1 0 1 1 0 1 0 0 1 1 0 0 0 2 1 0 0 0 11 1 1444.6517 Q96N67-4;Q96N67-3;Q96N67-5;Q96N67-2;Q96N67-6;Q96N67;H0Y7L2;F8W9H6 Q96N67-4 1407 1417 DOCK7 Dedicator of cytokinesis protein 7 yes no 3 0.014348 60.064 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 2692700 0 337500 779650 640280 935260 0 1440 1409 1461 6537;6538;6539;6540 4402 4402 1 DMVGIAQTGSGK FPLALSGRDMVGIAQT IAQTGSGKTLAYLLPA R D M G K T 1 0 0 1 0 1 0 3 0 1 0 1 1 0 0 1 1 0 0 1 0 12 0 1162.5652 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 131 142 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 2 0.00092463 92.856 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 72313000 8736200 11688000 7480200 4444400 18748000 21217000 1441 1361;629 1462 6541;6542;6543;6544;6545;6546;6547 4403;4404;4405;4406;4407;4408 4408 6 DMYGDDLEAR RPSKNLDKDMYGDDLE YGDDLEARIKTNRFVP K D M A R I 1 1 0 3 0 0 1 1 0 0 1 0 1 0 0 0 0 0 1 0 0 10 0 1183.4816 Q13573;G3V3A4;G3V4X8 Q13573 457 466 SNW1 SNW domain-containing protein 1 yes no 2 0.019916 63.694 By matching By matching By matching By matching By matching By MS/MS 1 1 1 7641400 0 0 1397300 0 1146600 5097600 1442 583 1463 6548;6549;6550 4409 4409 1 DMYNDTLNGSTEK EEISRVRKDMYNDTLN TLNGSTEKRSAELPDA K D M E K R 0 0 2 2 0 0 1 1 0 0 1 1 1 0 0 1 2 0 1 0 0 13 0 1486.6246 Q96PU8-3;Q96PU8;Q96PU8-5;Q96PU8-9;Q96PU8-8;Q96PU8-6 Q96PU8-3 55 67 QKI Protein quaking yes no 2 2.7789E-09 104.17 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 13997000 641720 2601000 2351700 1504700 1939100 4958800 1443 1412 1464 6551;6552;6553;6554;6555;6556 4410;4411;4412;4413;4414 4410 5 DNAEAISGHSVEADPK GEISSGRKDNAEAISG HSVEADPKEVEEEERH K D N P K E 3 0 1 2 0 0 2 1 1 1 0 1 0 0 1 2 0 0 0 1 0 16 0 1638.7485 Q8NFC6 Q8NFC6 2744 2759 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 3 0.019093 62.055 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1864600 0 625570 0 0 580890 658130 1444 1325 1465 6557;6558;6559 4415 4415 0 DNAEAISGHSVEADPKEVEEEER GEISSGRKDNAEAISG KEVEEEERHMPKRKRK K D N E R H 3 1 1 2 0 0 7 1 1 1 0 1 0 0 1 2 0 0 0 2 0 23 1 2539.131 Q8NFC6 Q8NFC6 2744 2766 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 4 0.040517 30.813 By matching By matching By matching By matching By matching By MS/MS 1 1803000 0 0 0 0 0 1803000 1445 1325 1466 6560 4416 4416 1 DNFYQHNVEK ________________ FYQHNVEKLENVSQLS K D N E K L 0 0 2 1 0 1 1 0 1 0 0 1 0 1 0 0 0 0 1 1 0 10 0 1292.5786 Q86W56-3;Q86W56-2;Q86W56 Q86W56-3 8 17 PARG Poly(ADP-ribose) glycohydrolase yes no 2 0.0056592 86.463 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2156800 299550 728270 0 273630 0 855330 1446 1268 1467 6561;6562;6563;6564 4417 4417 1 DNKPEEEEQVIHEDDERPSEK PEVESNEKDNKPEEEE DDERPSEKNEFSRRKR K D N E K N 0 1 1 3 0 1 7 0 1 1 0 2 0 0 2 1 0 0 0 1 0 21 2 2551.131 Q6VMQ6-2;G3V1U0;Q6VMQ6;F5GX74 Q6VMQ6-2 527 547 ATF7IP Activating transcription factor 7-interacting protein 1 yes no 4 0.00015776 58.339 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3836100 0 1053600 1256200 0 0 1526300 1447 488 1468 6565;6566;6567 4418 4418 1 DNLPLQENVTIQK QLLPLHPKDNLPLQEN QENVTIQKQKRRSVNS K D N Q K Q 0 0 2 1 0 2 1 0 0 1 2 1 0 0 1 0 1 0 0 1 0 13 0 1510.7991 B7Z6Q6;Q99661;Q99661-2;Q5JR91;Q5JR89 B7Z6Q6 78 90 KIF2C Kinesin-like protein KIF2C yes no 2 5.4435E-75 142.39 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 108160000 7651400 58509000 7241600 4723300 2750300 27281000 1448 193 1469 6568;6569;6570;6571;6572;6573 4419;4420;4421;4422;4423 4420 4 DNLPLQENVTIQKQK QLLPLHPKDNLPLQEN NVTIQKQKRRSVNSKI K D N Q K R 0 0 2 1 0 3 1 0 0 1 2 2 0 0 1 0 1 0 0 1 0 15 1 1766.9527 B7Z6Q6;Q99661;Q99661-2;Q5JR91;Q5JR89 B7Z6Q6 78 92 KIF2C Kinesin-like protein KIF2C yes no 2;3 1.5E-104 145.1 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 2 2 3 2 42070000 5360700 10365000 6918900 2226700 5883900 11315000 1449 193 1470 6574;6575;6576;6577;6578;6579;6580;6581;6582;6583;6584;6585;6586 4424;4425;4426;4427;4428;4429 4426 6 DNQESSDAELSSSEYIK PSSKKLKKDNQESSDA LSSSEYIKTDLDAMDI K D N I K T 1 0 1 2 0 1 3 0 0 1 1 1 0 0 0 5 0 0 1 0 0 17 0 1900.8174 Q96JM3 Q96JM3 622 638 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0061227 46.337 By matching By matching By matching By matching By matching By MS/MS 1 699360 0 0 0 0 0 699360 1450 1399 1471 6587 4430 4430 1 DNQLSEVANKFAK PLVLGFLRDNQLSEVA EVANKFAKATGATQQD R D N A K A 2 0 2 1 0 1 1 0 0 0 1 2 0 1 0 1 0 0 0 1 0 13 1 1462.7416 Q14978;Q14978-3;Q14978-2 Q14978 24 36 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2;3 2.3046E-15 108.98 By matching By MS/MS By matching By matching By matching By matching 2 6534900 0 6534900 0 0 0 0 1451 1120 1472 6588;6589 4431;4432 4432 2 DNQNFCVPCYEK GTKSFIPKDNQNFCVP FCVPCYEKQHAMQCVQ K D N E K Q 0 0 2 1 2 1 1 0 0 0 0 1 0 1 1 0 0 0 1 1 0 12 0 1572.6337 Q14192 Q14192 145 156 FHL2 Four and a half LIM domains protein 2 yes yes 2 7.3038E-12 107.99 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 11085000 0 0 3548100 1365100 1281600 4890000 1452 1101 1473 6590;6591;6592;6593 4433;4434;4435 4434 3 DPSVLIKTAIR LDGPDPEKDPSVLIKT VLIKTAIRCCKALTGI K D P I R C 1 1 0 1 0 0 0 0 0 2 1 1 0 0 1 1 1 0 0 1 0 11 1 1211.7238 Q8IX12-2;Q8IX12;F5H1H2;F5H3E1;F5H2E6 Q8IX12-2 501 511 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes no 3 0.0068094 69.721 By matching By matching By matching By matching By matching By MS/MS 1 1 1342200 435140 0 0 0 0 907050 1453 1285 1474 6594;6595 4436 4436 1 DQDAIETDAMIKK DDSQSDEKDQDAIETD ETDAMIKKKTKSSKPS K D Q K K K 2 0 0 3 0 1 1 0 0 2 0 2 1 0 0 0 1 0 0 0 0 13 1 1476.713 P35251-2;P35251 P35251-2 1109 1121 RFC1 Replication factor C subunit 1 yes no 2;3 0.0011548 81.565 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 2 1 2 12146000 0 2464200 1631100 2242000 1958400 3850800 1454 896 1475 6596;6597;6598;6599;6600;6601;6602;6603;6604 4437;4438;4439;4440;4441;4442;4443 4438 7 DQDELKPGPTNR EDIKKEEKDQDELKPG LKPGPTNRSRVTKSGS K D Q N R S 0 1 1 2 0 1 1 1 0 0 1 1 0 0 2 0 1 0 0 0 0 12 1 1368.6634 Q14151 Q14151 546 557 SAFB2 Scaffold attachment factor B2 yes yes 2;3 3.2975E-37 126.5 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 73303000 6757200 12150000 8883400 7048300 16571000 21893000 1455 1097 1476 6605;6606;6607;6608;6609;6610;6611;6612;6613;6614;6615;6616 4444;4445;4446;4447;4448;4449;4450;4451;4452;4453;4454;4455 4449 12 DQDLTIPESSTVK FLRRAKGKDQDLTIPE IPESSTVKGMMAGPMA K D Q V K G 0 0 0 2 0 1 1 0 0 1 1 1 0 0 1 2 2 0 0 1 0 13 0 1431.7093 Q49A26-5 Q49A26-5 97 109 GLYR1 Putative oxidoreductase GLYR1 yes yes 2 0.0022324 67.234 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1790500 0 464300 0 0 395520 930730 1456 1169 1477 6617;6618;6619 4456 4456 1 DQEALMKSVK FQSGRLVKDQEALMKS EALMKSVKLLQALAQY K D Q V K L 1 0 0 1 0 1 1 0 0 0 1 2 1 0 0 1 0 0 0 1 0 10 1 1147.5907 I3L1L3;Q9BQG0;Q9BQG0-2;E7EN09 I3L1L3 72 81 MYBBP1A Myb-binding protein 1A yes no 2 0.026481 73.9 By matching By matching By matching By matching By matching By MS/MS 1 393140 0 0 0 0 0 393140 1457 682 1478 6620 4457 4457 1 DQGGFGDRNEYGSR VMDILRERDQGGFGDR DRNEYGSRIGGGIDVP R D Q S R I 0 2 1 2 0 1 1 4 0 0 0 0 0 1 0 1 0 0 1 0 0 14 1 1556.6604 Q92945-2;Q92945;E7EP96 Q92945-2 307 320 KHSRP Far upstream element-binding protein 2 yes no 3 0.0011285 73.36 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 1 1 2 1 185170000 15405000 30926000 17965000 9919100 33615000 77340000 1458 1366 1479 6621;6622;6623;6624;6625;6626;6627;6628 4458;4459;4460;4461;4462 4459 5 DQGGFGDRNEYGSRIGGGIDVPVPR VMDILRERDQGGFGDR GIDVPVPRHSVGVVIG R D Q P R H 0 3 1 3 0 1 1 7 0 2 0 0 0 1 2 1 0 0 1 2 0 25 2 2617.2633 Q92945-2;Q92945;E7EP96 Q92945-2 307 331 KHSRP Far upstream element-binding protein 2 yes no 4 0.0041226 39.767 By MS/MS By matching By matching By matching By matching By matching 1 27792000 27792000 0 0 0 0 0 1459 1366 1480 6629 4463 4463 1 DQIVDLTVGNNK YNTIDDLKDQIVDLTV DLTVGNNKTLLDIDNT K D Q N K T 0 0 2 2 0 1 0 1 0 1 1 1 0 0 0 0 1 0 0 2 0 12 0 1314.6779 P35527;CON__P35527 P35527 213 224 KRT9 Keratin, type I cytoskeletal 9 yes no 2 3.7356E-166 171.62 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 2 31509000 0 21396000 0 2159300 0 7953700 + 1460 899 1481 6630;6631;6632;6633;6634 4464;4465 4465 2 DQLDSTGRPLVILPQRK SLLLRRTKDQLDSTGR LVILPQRKFQLHHLKL K D Q R K F 0 2 0 2 0 2 0 1 0 1 3 1 0 0 2 1 1 0 0 1 0 17 2 1935.0902 Q9UNY4 Q9UNY4 823 839 TTF2 Transcription termination factor 2 yes yes 4 0.0093889 42.958 By matching By matching By matching By MS/MS By matching By matching 1 1561500 0 0 0 1561500 0 0 1461 1618 1482 6635 4466 4466 1 DQLIIDAGQK RDTSKKTKDQLIIDAG LIIDAGQKHFGATVCK K D Q Q K H 1 0 0 2 0 2 0 1 0 2 1 1 0 0 0 0 0 0 0 0 0 10 0 1099.5873 Q56NI9;H0YB88;Q49AP4 Q56NI9 373 382 ESCO2 N-acetyltransferase ESCO2 yes no 2 0.016563 66.56 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 44999000 0 0 8570000 10104000 4913600 21411000 1462 1176 1483 6636;6637;6638;6639 4467;4468 4468 2 DQLSQSIVMYK MAALTKEKDQLSQSIV SQSIVMYKSLFEASQQ K D Q Y K S 0 0 0 1 0 2 0 0 0 1 1 1 1 0 0 2 0 0 1 1 0 11 0 1310.654 A6NHR9;A6NHR9-2;A6NHR9-3 A6NHR9 1631 1641 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes no 2 0.0023914 87.667 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 11535000 0 6524700 0 5009900 0 0 1463 23 1484 6640;6641 4469;4470 4470 2 DQNIVGNARPKETDHK IHVKAFSKDQNIVGNA RPKETDHKSLSSSPDK K D Q H K S 1 1 2 2 0 1 1 1 1 1 0 2 0 0 1 0 1 0 0 1 0 16 2 1820.9129 Q9BVI0;Q5JWZ0;Q5JXL1;B0QYY0;Q9BVI0-2 Q9BVI0 139 154 PHF20 PHD finger protein 20 yes no 3 0.036658 44.391 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 6140700 890360 949540 920280 892530 1474200 1013800 1464 1454 1485 6642;6643;6644;6645;6646;6647 4471 4471 1 DQVTAQEIFQDNHEDGPTAK PLIEAKKKDQVTAQEI HEDGPTAKKLKTEQGG K D Q A K K 2 0 1 3 0 3 2 1 1 1 0 1 0 1 1 0 2 0 0 1 0 20 0 2242.0138 P13010 P13010 546 565 XRCC5 X-ray repair cross-complementing protein 5 yes yes 3 1.1301E-07 82.755 By MS/MS By matching By matching By matching By matching By matching 1 5680000 5680000 0 0 0 0 0 1465 830 1486 6648 4472 4472 0 DQWEKALCRALR RKTLKTLRDQWEKALC KALCRALRETKNRLER R D Q L R E 2 2 0 1 1 1 1 0 0 0 2 1 0 0 0 0 0 1 0 0 0 12 2 1544.7882 O00411 O00411 439 450 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 3 0.026942 69.346 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 1466 690 1487 6649 4473 4473 1 DRETMGHRYVEVFK EVKLALKKDRETMGHR HRYVEVFKSNNVEMDW K D R F K S 0 2 0 1 0 0 2 1 1 0 0 1 1 1 0 0 1 0 1 2 0 14 2 1765.857 D6RBM0;E9PCY7;P31943;G8JLB6;D6RIU0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E7EQJ0;H0YAQ2;P55795;B4DFK9 D6RBM0 74 87 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H2, N-terminally processed no no 4 0.01183 48.532 By matching By matching By matching By matching By matching By MS/MS 1 1 13841000 0 0 5688400 0 0 8152900 1467 322;970 1488 6650;6651 4474 4474 1 DRLLASTLVHSVK NRPASLTKDRLLASTL STLVHSVKKEQEFRSI K D R V K K 1 1 0 1 0 0 0 0 1 0 3 1 0 0 0 2 1 0 0 2 0 13 1 1437.8304 Q9NYF8-2;Q9NYF8;Q9NYF8-4;E9PK09;E9PQN2;E9PKI6;E9PJA7;Q9NYF8-3;E9PK91 Q9NYF8-2 566 578 BCLAF1 Bcl-2-associated transcription factor 1 no no 3 6.8527E-110 150.9 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 218950000 128720000 0 54517000 3446700 13028000 19239000 1468 1563;452 1489 6652;6653;6654;6655;6656 4475;4476;4477;4478 4475 4 DRLLASTLVHSVKK NRPASLTKDRLLASTL TLVHSVKKEQEFRSIF K D R K K E 1 1 0 1 0 0 0 0 1 0 3 2 0 0 0 2 1 0 0 2 0 14 2 1565.9253 Q9NYF8-2;Q9NYF8;Q9NYF8-4;E9PK09;E9PQN2;E9PKI6;E9PJA7;Q9NYF8-3;E9PK91 Q9NYF8-2 566 579 BCLAF1 Bcl-2-associated transcription factor 1 no no 3 0.016048 56.46 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 8835700 0 864130 2835200 3517200 1619100 0 1469 1563;452 1490 6657;6658;6659;6660 4479 4479 1 DRPENVHGGILADDMGLGK TITNFSEKDRPENVHG ADDMGLGKTLTAIAVI K D R G K T 1 1 1 3 0 0 1 4 1 1 2 1 1 0 1 0 0 0 0 1 0 19 1 1992.9687 Q14527;Q14527-2;E7ESN4;F5H3D6 Q14527 282 300 HLTF Helicase-like transcription factor yes no 3;4 1.5854E-51 117.29 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 1 2 1 83000000 4827600 21641000 11074000 3600200 0 41857000 1470 1107 1491 6661;6662;6663;6664;6665;6666;6667 4480;4481;4482;4483;4484;4485;4486 4485 7 DSALVEESNGTLEEK KMLSSEPKDSALVEES SNGTLEEKQASEQENE K D S E K Q 1 0 1 1 0 0 4 1 0 0 2 1 0 0 0 2 1 0 0 1 0 15 0 1619.7526 Q9UJA5;B4DUV6;Q9UJA5-3;Q9UJA5-2 Q9UJA5 281 295 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes no 2 0.0011826 69.431 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 7286700 459660 1411900 1199600 0 1649400 2566200 1471 1597 1492 6668;6669;6670;6671;6672 4487;4488 4487 2 DSALVPGASKQPLTSPSALVDSKQESK SAPLAPEKDSALVPGA VDSKQESKLCCFTESP K D S S K L 3 0 0 2 0 2 1 1 0 0 3 3 0 0 3 6 1 0 0 2 0 27 2 2739.4291 Q14865-2;Q14865 Q14865-2 309 335 ARID5B AT-rich interactive domain-containing protein 5B yes no 3 0.0022355 42.557 By matching By MS/MS By matching By matching By matching By matching 1 12463000 0 12463000 0 0 0 0 1472 1117 1493 6673 4489 4489 1 DSAQTSVTQAQR LQVANEARDSAQTSVT TSVTQAQREKAELSRK R D S Q R E 2 1 0 1 0 3 0 0 0 0 0 0 0 0 0 2 2 0 0 1 0 12 0 1290.6164 Q14980-2;Q14980;F5H4J1;F5H6Y5 Q14980-2 632 643 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 0.011869 57.434 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1154100 0 515080 251230 0 0 387810 1473 1121 1494 6674;6675;6676 4490;4491 4491 2 DSAQTSVTQAQREK LQVANEARDSAQTSVT VTQAQREKAELSRKVE R D S E K A 2 1 0 1 0 3 1 0 0 0 0 1 0 0 0 2 2 0 0 1 0 14 1 1547.754 Q14980-2;Q14980;F5H4J1;F5H6Y5 Q14980-2 632 645 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 9.4187E-42 120.87 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 22996000 2405300 4655700 3068600 1309400 3925200 7632100 1474 1121 1495 6677;6678;6679;6680;6681;6682 4492;4493;4494;4495;4496;4497 4493 6 DSASLFVVAR VEERRDGKDSASLFVV ASLFVVARILADLNQQ K D S A R I 2 1 0 1 0 0 0 0 0 0 1 0 0 1 0 2 0 0 0 2 0 10 0 1063.5662 Q9Y2Y9 Q9Y2Y9 57 66 KLF13 Krueppel-like factor 13 yes yes 2 0.0027514 98.048 By matching By MS/MS By matching By matching By matching By matching 1 7924100 0 7924100 0 0 0 0 1475 1641 1496 6683 4498 4498 1 DSAVNAICYGAK SHKRLVMKDSAVNAIC NAICYGAKIMLPGVLR K D S A K I 3 0 1 1 1 0 0 1 0 1 0 1 0 0 0 1 0 0 1 1 0 12 0 1267.5867 O60832;O60832-2;H7C2Q2 O60832 303 314 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 2 0.0018107 85.813 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 10405000 0 1663200 2850100 1442900 2345800 2102700 1476 733 1497 6684;6685;6686;6687;6688 4499;4500;4501 4500 3 DSDENLTDAEGK RRRISYQRDSDENLTD NLTDAEGKVIGLQIFN R D S G K V 1 0 1 3 0 0 2 1 0 0 1 1 0 0 0 1 1 0 0 0 0 12 0 1292.5368 Q69YH5;E9PEI0 Q69YH5 209 220 CDCA2 Cell division cycle-associated protein 2 yes no 2 0.0017862 81.709 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 2623800 0 701770 675950 0 173390 1072700 1477 1219 1498 6689;6690;6691;6692 4502;4503;4504;4505 4504 4 DSDGVDGFEAEGK HNNRKRRRDSDGVDGF DGFEAEGKKDKKDYDN R D S G K K 1 0 0 3 0 0 2 3 0 0 0 1 0 1 0 1 0 0 0 1 0 13 0 1324.5419 Q96KR1 Q96KR1 1053 1065 ZFR Zinc finger RNA-binding protein yes yes 2 0.0018416 73.386 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 11876000 1007800 2326300 3148600 1046700 4011400 334700 1478 1403 1499 6693;6694;6695;6696;6697;6698 4506;4507;4508 4508 3 DSDGVDGFEAEGKKDK HNNRKRRRDSDGVDGF EAEGKKDKKDYDNF__ R D S D K K 1 0 0 4 0 0 2 3 0 0 0 3 0 1 0 1 0 0 0 1 0 16 2 1695.7588 Q96KR1 Q96KR1 1053 1068 ZFR Zinc finger RNA-binding protein yes yes 3 0.039809 72.209 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 1479 1403 1500 6699 4509 4509 1 DSEEFGENEEENVHSK QDGNDELKDSEEFGEN EEENVHSKELLSAEEN K D S S K E 0 0 2 1 0 0 6 1 1 0 0 1 0 1 0 2 0 0 0 1 0 16 0 1877.7551 Q9NWH9;H7BXE3;H0YL55;H0YKU6 Q9NWH9 125 140 SLTM SAFB-like transcription modulator yes no 2;3 9.1157E-98 139.66 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 1 20750000 2386900 3671300 3494000 1753700 6044700 3399400 1480 1554 1501 6700;6701;6702;6703;6704;6705;6706;6707 4510;4511;4512;4513;4514;4515;4516 4515 7 DSEEQQLQPQAK KMKCGKEKDSEEQQLQ QQLQPQAKAVVRSSHR K D S A K A 1 0 0 1 0 4 2 0 0 0 1 1 0 0 1 1 0 0 0 0 0 12 0 1399.6579 Q5H9F3-3;Q5H9F3-2;Q5H9F3;H7C4B2 Q5H9F3-3 1126 1137 BCORL1 BCL-6 corepressor-like protein 1 yes no 2 2.0127E-22 129 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 10403000 789890 1051200 1553200 951050 1606400 4451000 1481 1182 1502 6708;6709;6710;6711;6712;6713 4517;4518;4519;4520;4521;4522 4519 5 DSEKENQIPEEAGSSGLGK EFFRLSPKDSEKENQI AGSSGLGKAKRKACPL K D S G K A 1 0 1 1 0 1 4 3 0 1 1 2 0 0 1 3 0 0 0 0 0 19 1 1973.9178 Q15004;H0YMA4;H0YKX3 Q15004 75 93 KIAA0101 PCNA-associated factor yes no 3 0.00051506 65.105 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 25297000 1732500 5145600 8108000 1108900 1869200 7333100 1482 1124 1503 6714;6715;6716;6717;6718;6719 4523;4524;4525 4524 3 DSEKENQIPEEAGSSGLGKAK EFFRLSPKDSEKENQI SSGLGKAKRKACPLQP K D S A K R 2 0 1 1 0 1 4 3 0 1 1 3 0 0 1 3 0 0 0 0 0 21 2 2173.0499 Q15004;H0YMA4;H0YKX3 Q15004 75 95 KIAA0101 PCNA-associated factor yes no 3;4 2.5303E-05 67.928 By matching By matching By matching By MS/MS By matching By MS/MS 1 2 2 2 2 2 20953000 801360 2903700 7766600 1827400 1874600 5779800 1483 1124 1504 6720;6721;6722;6723;6724;6725;6726;6727;6728;6729;6730 4526;4527 4526 2 DSELNQKRPQYIK IEKEIKEKDSELNQKR QKRPQYIKAKENTSHK K D S I K A 0 1 1 1 0 2 1 0 0 1 1 2 0 0 1 1 0 0 1 0 0 13 2 1617.8475 Q14683 Q14683 288 300 SMC1A Structural maintenance of chromosomes protein 1A yes yes 3 0.0069717 65.695 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 5384900 615930 1194800 723740 654230 0 2196300 1484 1110 1505 6731;6732;6733;6734;6735 4528 4528 1 DSENTPVKGGTVADLDEQDEETVTAGGK PKNVNLKKDSENTPVK ETVTAGGKEDEDPAKG K D S G K E 2 0 1 4 0 1 4 4 0 0 1 2 0 0 1 1 4 0 0 3 0 28 1 2861.305 Q92922 Q92922 394 421 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 3 0.00014053 49.094 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 5215200 2247700 0 2967500 0 0 0 1485 1365 1506 6736;6737 4529;4530 4529 2 DSEPLGIEEAQIGK VHRTAGQKDSEPLGIE IEEAQIGKRGYLTPTS K D S G K R 1 0 0 1 0 1 3 2 0 2 1 1 0 0 1 1 0 0 0 0 0 14 0 1484.7359 B9ZVN9;O95602 B9ZVN9 239 252 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 yes no 2 1.3621E-07 95.854 By matching By MS/MS By matching By matching By matching By matching 1 6296400 0 6296400 0 0 0 0 1486 218 1507 6738 4531 4531 1 DSETVDEDEEVDPALTVGTIKK RTMRPTQKDSETVDED LTVGTIKKHTLSIGDM K D S K K H 1 0 0 4 0 0 4 1 0 1 1 2 0 0 1 1 3 0 0 3 0 22 1 2389.1384 Q14690;F5H7X0 Q14690 1009 1030 PDCD11 Protein RRP5 homolog yes no 3 4.3825E-134 137.99 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 33067000 11330000 11575000 10163000 0 0 0 1487 1112 1508 6739;6740;6741 4532;4533;4534 4533 3 DSFDDRGPSLNPVLDYDHGSR EEKRHFRRDSFDDRGP LDYDHGSRSQESGYYD R D S S R S 0 2 1 5 0 0 0 2 1 0 2 0 0 1 2 3 0 0 1 1 0 21 1 2361.0622 P43243;A8MXP9;D6REM6;D6R991 P43243 187 207 MATR3 Matrin-3 yes no 4 1.619E-05 70.897 By matching By matching By matching By matching By matching By MS/MS 1 20903000 0 0 0 0 0 20903000 1488 52 1509 6742 4535 4535 1 DSFHSLRDSVPSLQGEK RKRRDHIKDSFHSLRD VPSLQGEKASRAQILD K D S E K A 0 1 0 2 0 1 1 1 1 0 2 1 0 1 1 4 0 0 0 1 0 17 1 1900.9279 P61244-2;P61244;Q6V3B1;P61244-3;G3V563;G3V2R5;P61244-4;E7ESS7;A6NH73;P61244-5 P61244-2 32 48 MAX Protein max yes no 3 0.0063591 46.249 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 16973000 2418700 1435600 0 684860 0 12433000 1489 981 1510 6743;6744;6745;6746 4536;4537;4538 4536 3 DSFIGENSR SKLTQVLRDSFIGENS SFIGENSRTCMIATIS R D S S R T 0 1 1 1 0 0 1 1 0 1 0 0 0 1 0 2 0 0 0 0 0 9 0 1023.4621 B7Z6Q6;Q99661;Q99661-2;B7Z7M6;H0Y5Z9;O00139-1;E9PB70;O00139;O00139-4;O00139-2 B7Z6Q6 509 517 KIF2C;KIF2A Kinesin-like protein KIF2C;Kinesin-like protein KIF2A no no 2 0.024764 67.207 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 21811000 1358500 3327600 2653900 819130 3239000 10413000 1490 193;403;686 1511 6747;6748;6749;6750;6751;6752 4539;4540;4541 4539 3 DSGTEDMLWTEK GIKLDSSKDSGTEDML EDMLWTEKYQPQTASE K D S E K Y 0 0 0 2 0 0 2 1 0 0 1 1 1 0 0 1 2 1 0 0 0 12 0 1410.5973 Q96QE3;Q96QE3-2 Q96QE3 1046 1057 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 0.0036853 68.463 By matching By MS/MS By matching By matching By matching By matching 1 1476600 0 1476600 0 0 0 0 1491 1415 1512 6753 4542 4542 1 DSHPSEEPVKSFSK VSPEQGAKDSHPSEEP EPVKSFSKTQRWAEPG K D S S K T 0 0 0 1 0 0 2 0 1 0 0 2 0 1 2 4 0 0 0 1 0 14 1 1572.742 B7Z5N6;Q5T1V6-2;Q5T1V6;Q5T1V5 B7Z5N6 83 96 DDX59 Probable ATP-dependent RNA helicase DDX59 yes no 3 0.0011287 72.681 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 1 1 1 18274000 5014500 2084000 2775600 2256000 2799800 3343700 1492 190 1513 6754;6755;6756;6757;6758;6759;6760 4543;4544;4545;4546;4547 4544 5 DSIFEPAK KYNSQTAKDSIFEPAK DSIFEPAKGGEKLQIK K D S A K G 1 0 0 1 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 0 0 8 0 905.44945 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 937 944 ADAR Double-stranded RNA-specific adenosine deaminase no no 2 0.008061 103.83 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 27236000 2726800 0 2030400 0 5888300 16591000 1493 352;968 1514 6761;6762;6763;6764 4548;4549;4550 4550 3 DSIFEPAKGGEK KYNSQTAKDSIFEPAK EPAKGGEKLQIKKTVS K D S E K L 1 0 0 1 0 0 2 2 0 1 0 2 0 1 1 1 0 0 0 0 0 12 1 1276.6299 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 937 948 ADAR Double-stranded RNA-specific adenosine deaminase no no 2;3 2.9163E-18 117.86 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 179100000 17609000 21896000 12330000 7772600 43684000 75805000 1494 352;968 1515 6765;6766;6767;6768;6769;6770;6771;6772;6773;6774 4551;4552;4553;4554;4555;4556;4557;4558;4559;4560;4561;4562 4557 12 DSIFEPAKGGEKLQIK KYNSQTAKDSIFEPAK GGEKLQIKKTVSFHLY K D S I K K 1 0 0 1 0 1 2 2 0 2 1 3 0 1 1 1 0 0 0 0 0 16 2 1758.9516 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 937 952 ADAR Double-stranded RNA-specific adenosine deaminase no no 3 0.0062484 59.884 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 17286000 5947500 0 7045100 0 4293800 0 1495 352;968 1516 6775;6776;6777 4563;4564 4563 2 DSLADRALLPHVLCK GVAFWISKDSLADRAL LLPHVLCKNCVVELNF K D S C K N 2 1 0 2 1 0 0 0 1 0 4 1 0 0 1 1 0 0 0 1 0 15 1 1706.9138 H3BQZ7;Q1KMD3 H3BQZ7 392 406 hCG_2044799;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 3 0.0059153 52.008 By matching By MS/MS By matching By matching By matching By matching 1 15757000 0 15757000 0 0 0 0 1496 640 1517 6778 4565 4565 1 DSLDQFDCK EQIPEIQKDSLDQFDC SLDQFDCKLLNPSLQK K D S C K L 0 0 0 3 1 1 0 0 0 0 1 1 0 1 0 1 0 0 0 0 0 9 0 1126.4601 C9J4N8;Q9HAV4;E7EQN7;H0Y3W3 C9J4N8 752 760 XPO5 Exportin-5 yes no 2 0.0016558 106.88 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 6455500 646420 1248500 0 0 0 4560600 1497 227 1518 6779;6780;6781 4566;4567 4566 2 DSLIELK PSHSSTVKDSLIELKE KDSLIELKESSAKLYI K D S L K E 0 0 0 1 0 0 1 0 0 1 2 1 0 0 0 1 0 0 0 0 0 7 0 816.45928 Q8NI27;Q8NI27-2;B7ZBA0;H0Y594;H0Y7U4 Q8NI27 1426 1432 THOC2 THO complex subunit 2 yes no 2 0.027408 86.472 By matching By matching By MS/MS By matching By matching By matching 1 1 2322800 0 0 2120600 0 202180 0 1498 1330 1519 6782;6783 4568 4568 1 DSLIELKESSAK PSHSSTVKDSLIELKE ELKESSAKLYINHTPP K D S A K L 1 0 0 1 0 0 2 0 0 1 2 2 0 0 0 3 0 0 0 0 0 12 1 1318.698 Q8NI27;Q8NI27-2;B7ZBA0;H0Y594;H0Y7U4 Q8NI27 1426 1437 THOC2 THO complex subunit 2 yes no 2 0.0051694 88.803 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 7241800 1138400 0 2297800 1338900 0 2466800 1499 1330 1520 6784;6785;6786;6787 4569;4570 4570 2 DSLITPHVSR EAKTAQEKDSLITPHV LITPHVSRSSTPRESP K D S S R S 0 1 0 1 0 0 0 0 1 1 1 0 0 0 1 2 1 0 0 1 0 10 0 1123.5986 P49792;E9PGT0;P0DJD0;P0DJD1;F8VYC4;Q99666;O14715;E7ES93;B4DTM4;H7BZ48;Q7Z3J3 P49792 2446 2455 RANBP2;RGPD1;RGPD2;RGPD5;RGPD8;RGPD6;RGPD4 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RanBP2-like and GRIP domain-containing protein 4 no no 2 0.033197 56.043 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 11140000 871510 1395000 1436200 1628200 2609100 3199400 1500 945;1251 1521 6788;6789;6790;6791;6792;6793 4571 4571 1 DSLVQSCPGSLSLCAGVK PCPQEKSKDSLVQSCP LSLCAGVKSSTPPGES K D S V K S 1 0 0 1 2 1 0 2 0 0 3 1 0 0 1 4 0 0 0 2 0 18 0 1876.9023 Q9UQ35;F5GWZ7;Q9UQ35-2;I3L2L6 Q9UQ35 1023 1040 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 4.7105E-183 160.45 By matching By MS/MS By matching By matching By matching By matching 1 79760000 0 79760000 0 0 0 0 1501 1623 1522 6794 4572 4572 1 DSMEINEADFRWQR KDGAEWSRDSMEINEA EADFRWQRRVLSSEHT R D S Q R R 1 2 1 2 0 1 2 0 0 1 0 0 1 1 0 1 0 1 0 0 0 14 1 1795.7948 B5MDV5;Q5TH69 B5MDV5 399 412 KIAA1244;ARFGEF3 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 yes no 2 0.03288 50.897 By matching By matching By matching By matching By MS/MS By matching 1 303050 0 0 0 0 303050 0 1502 174 1523 6795 4573 4573 16 1 DSNNLCLHFNPR SFVLNLGKDSNNLCLH LCLHFNPRFNAHGDAN K D S P R F 0 1 3 1 1 0 0 0 1 0 2 0 0 1 1 1 0 0 0 0 0 12 0 1485.6783 P09382 P09382 38 49 LGALS1 Galectin-1 yes yes 2;3 3.972E-07 101.72 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 121280000 15699000 11607000 27865000 3209700 31223000 31677000 1503 812 1524 6796;6797;6798;6799;6800;6801;6802;6803;6804;6805;6806;6807 4574;4575;4576;4577;4578;4579;4580;4581;4582;4583;4584 4578 11 DSNNLCLHFNPRFNAHGDANTIVCNSK SFVLNLGKDSNNLCLH NTIVCNSKDGGAWGTE K D S S K D 2 1 6 2 2 0 0 1 2 1 2 1 0 2 1 2 1 0 0 1 0 27 1 3114.4148 P09382 P09382 38 64 LGALS1 Galectin-1 yes yes 4 1.7999E-13 72.286 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 39946000 0 21791000 0 18155000 0 0 1504 812 1525 6808;6809 4585;4586 4585 2 DSPSVCSNLAAK RIISKGTKDSPSVCSN VCSNLAAKHSFYNNKC K D S A K H 2 0 1 1 1 0 0 0 0 0 1 1 0 0 1 3 0 0 0 1 0 12 0 1247.5816 Q9UGR2-2;Q9UGR2 Q9UGR2-2 571 582 ZC3H7B Zinc finger CCCH domain-containing protein 7B yes no 2 0.025686 49.448 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2124000 0 314390 0 0 741060 1068500 1505 1590 1526 6810;6811;6812 4587 4587 1 DSQLIVSSAK QSYLIAYKDSQLIVSS QLIVSSAKALQHCEEL K D S A K A 1 0 0 1 0 1 0 0 0 1 1 1 0 0 0 3 0 0 0 1 0 10 0 1046.5608 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3;Q8WVX6 Q7Z5K2 877 886 WAPAL Wings apart-like protein homolog yes no 2 0.025409 59.265 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2800600 0 862330 0 0 509270 1429000 1506 1253 1527 6813;6814;6815 4588 4588 1 DSQVGTVNYMPPEAIK PDTTSVVKDSQVGTVN YMPPEAIKDMSSSREN K D S I K D 1 0 1 1 0 1 1 1 0 1 0 1 1 0 2 1 1 0 1 2 0 16 0 1747.8451 P33981-2;P33981 P33981-2 680 695 TTK Dual specificity protein kinase TTK yes no 2 0.032781 38.219 By matching By MS/MS By matching By matching By matching By matching 1 2265100 0 2265100 0 0 0 0 1507 891 1528 6816 4589 4589 1 DSRPSQAAGDNQGDEAK KEKKSSSKDSRPSQAA DNQGDEAKEQTFSGGT K D S A K E 3 1 1 3 0 2 1 2 0 0 0 1 0 0 1 2 0 0 0 0 0 17 1 1744.7612 Q9Y2W1 Q9Y2W1 186 202 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.00025637 71.263 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 14804000 1807400 2584900 7797200 1315000 534860 764930 1508 1639 1529 6817;6818;6819;6820;6821;6822 4590;4591;4592;4593 4590 4 DSRPSQAAGDNQGDEAKEQTFSGGTSQDTK KEKKSSSKDSRPSQAA GGTSQDTKASESSKPW K D S T K A 3 1 1 4 0 4 2 4 0 0 0 2 0 1 1 4 3 0 0 0 0 30 2 3111.3613 Q9Y2W1 Q9Y2W1 186 215 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3;4 8.4624E-64 105.25 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 89726000 24781000 3116300 22661000 23733000 8391700 7042300 1509 1639 1530 6823;6824;6825;6826;6827;6828;6829 4594;4595;4596;4597;4598;4599;4600 4600 7 DSSDPNELYVNHK TRNPHAAKDSSDPNEL NELYVNHKVYTRHMTW K D S H K V 0 0 2 2 0 0 1 0 1 0 1 1 0 0 1 2 0 0 1 1 0 13 0 1516.6794 O15160-2;O15160;E7EQB9;H0Y9C4;D6RDJ3;E9PDD3 O15160-2 155 167 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes no 3 0.0070962 57.106 By matching By matching By matching By matching By matching By MS/MS 1 1 2962200 0 1058400 0 0 0 1903700 1510 704 1531 6830;6831 4601 4601 1 DSSGWSSSKDKDAYSSFGSR ATKGFYDKDSSGWSSS AYSSFGSRSDSRGKSS K D S S R S 1 1 0 3 0 0 0 2 0 0 0 2 0 1 0 8 0 1 1 0 0 20 2 2152.9298 O00571;O00571-2;B4DLU5;B4E3C4;B4DLA0 O00571 56 75 DDX3X ATP-dependent RNA helicase DDX3X yes no 3;4 0.0017145 58.01 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 2 23953000 0 2767500 4550100 2890100 5430100 8314900 1511 693 1532 6832;6833;6834;6835;6836;6837;6838;6839;6840;6841 4602;4603;4604;4605;4606;4607 4604 6 DSSKPPFSLENHSACLDSVAK AEAPSLVKDSSKPPFS ACLDSVAKSAWPRPGE K D S A K S 2 0 1 2 1 0 1 0 1 0 2 2 0 1 2 5 0 0 0 1 0 21 1 2288.0743 Q7Z5J4-3;E7EVZ3;Q7Z5J4;A8MTC3;Q7Z5J4-2;C9JWB0;A8MXE8;Q7Z5J4-4;E7ETW1 Q7Z5J4-3 635 655 RAI1 Retinoic acid-induced protein 1 yes no 4 0.034489 41.292 By matching By matching By matching By matching By matching By MS/MS 1 5602400 0 0 0 0 0 5602400 1512 39 1533 6842 4608 4608 0 DSSSTDSANEKPALIPR GPMNGCEKDSSSTDSA EKPALIPREKKISILE K D S P R E 2 1 1 2 0 0 1 0 0 1 1 1 0 0 2 4 1 0 0 0 0 17 1 1786.8697 F8VZ02;C9JGM8;C9JW67;F8W6C2;Q9NUQ6-2;F2Z2S1;C9JKE4;F8VT91;B8ZZZ7;Q9NUQ6;B4DT67 F8VZ02 114 130 SPATS2L SPATS2-like protein yes no 3 0.00017362 85.976 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 12689000 886700 3156400 2841400 0 1321200 4483700 1513 246 1534 6843;6844;6845;6846;6847 4609;4610;4611;4612 4610 4 DSSSTDSANEKPALIPREK GPMNGCEKDSSSTDSA PALIPREKKISILEEP K D S E K K 2 1 1 2 0 0 2 0 0 1 1 2 0 0 2 4 1 0 0 0 0 19 2 2044.0073 F8VZ02;C9JGM8;C9JW67;F8W6C2;Q9NUQ6-2;F2Z2S1;C9JKE4;F8VT91;B8ZZZ7;Q9NUQ6;B4DT67 F8VZ02 114 132 SPATS2L SPATS2-like protein yes no 3 0.0011909 67.902 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 6639500 653120 1507400 2322400 797410 0 1359100 1514 246 1535 6848;6849;6850;6851;6852 4613;4614;4615 4614 3 DSVAQGTTNVHSSEHAGR DSTADDSKDSVAQGTT HSSEHAGRNGRNAADP K D S G R N 2 1 1 1 0 1 1 2 2 0 0 0 0 0 0 3 2 0 0 2 0 18 0 1851.846 P46013;F5H4V4 P46013 173 190 MKI67 Antigen KI-67 yes no 3;4 0.0011555 76.82 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 2 2 2 2 30733000 830750 6150600 5867800 1731100 3169800 12983000 1515 919 1536 6853;6854;6855;6856;6857;6858;6859;6860;6861;6862;6863 4616;4617;4618;4619 4616 4 DSVAQGTTNVHSSEHAGRNGR DSTADDSKDSVAQGTT EHAGRNGRNAADPISG K D S G R N 2 2 2 1 0 1 1 3 2 0 0 0 0 0 0 3 2 0 0 2 0 21 1 2179.0115 P46013;F5H4V4 P46013 173 193 MKI67 Antigen KI-67 yes no 3;5 0.002537 49.537 By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 2 2 2 2 22636000 1464200 1815200 3391100 1991700 3254300 10719000 1516 919 1537 6864;6865;6866;6867;6868;6869;6870;6871;6872;6873;6874 4620;4621;4622;4623 4621 4 DSVEENMLK IITKFIVKDSVEENML SVEENMLKIQNKKREL K D S L K I 0 0 1 1 0 0 2 0 0 0 1 1 1 0 0 1 0 0 0 1 0 9 0 1063.4856 Q14527;Q14527-2 Q14527 964 972 HLTF Helicase-like transcription factor yes no 2 0.014268 78.264 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 13072000 730550 2392700 1353200 0 0 8595800 1517 1107 1538 6875;6876;6877;6878 4624 4624 1 DSVEENMLKIQNKK IITKFIVKDSVEENML MLKIQNKKRELAAGAF K D S K K R 0 0 2 1 0 1 2 0 0 1 1 3 1 0 0 1 0 0 0 1 0 14 2 1674.8611 Q14527;Q14527-2 Q14527 964 977 HLTF Helicase-like transcription factor yes no 4 0.01434 46.88 By matching By matching By matching By matching By matching By MS/MS 1 1 2815000 0 0 0 176580 0 2638400 1518 1107 1539 6879;6880 4625 4625 1 DSVMSANGKPDPDTVPDS YIREQREKDSVMSANG DPDTVPDS________ K D S D S - 1 0 1 4 0 0 0 1 0 0 0 1 1 0 3 3 1 0 0 2 0 18 1 1830.7942 Q7Z7H8;A6NGJ4 Q7Z7H8 244 261 MRPL10 39S ribosomal protein L10, mitochondrial yes no 2 0.0040591 63.614 By MS/MS By matching By matching By matching By matching By matching 1 0 0 0 0 0 0 0 1519 22 1540 6881 4626 4626 1 DSVVSLESQKTPADPKLK SPSKPSEKDSVVSLES TPADPKLKTLSQTKKN K D S L K T 1 0 0 2 0 1 1 0 0 0 2 3 0 0 2 3 1 0 0 2 0 18 2 1941.0419 Q8NEF9 Q8NEF9 211 228 SRFBP1 Serum response factor-binding protein 1 yes yes 3 0.0064867 56.339 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 2 1 1 23533000 5278800 4187300 3650400 3100200 889120 6427200 1520 1322 1541 6882;6883;6884;6885;6886;6887;6888 4627;4628;4629 4627 2 DSYSSRDYPSSR RDDGYSTKDSYSSRDY SRDYPSSRDTRDYAPP K D S S R D 0 2 0 2 0 0 0 0 0 0 0 0 0 0 1 5 0 0 2 0 0 12 1 1418.6062 Q96E39;B3KRG5;H3BUY5;H3BT71;P38159-2;P38159;H0Y6E7 Q96E39 218 229 RBMXL1;RBMX RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed no no 3 0.023874 50.46 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 6372700 489220 776830 0 211860 1066600 3828200 1521 1379;649 1542 6889;6890;6891;6892;6893 4630 4630 1 DSYVGDEAQSK VMVGMGQKDSYVGDEA VGDEAQSKRGILTLKY K D S S K R 1 0 0 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 11 0 1197.515 F5H0N0;B4E335;P63261;P60709;I3L3I4;G5E9R0;I3L3R2;E7EVS6;I3L3I0;I3L1U9;E7EQV5;Q5T8M8;A6NL76;P68133;P68032;Q5T8M7;F5H1C1;P63267;P62736;C9JUM1;C9JZR7;C9JTX5;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;I3L4N8;B4DUI8 F5H0N0 51 61 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle yes no 2 0.0040752 78.903 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 18136000 3264100 7528600 0 3358900 138970 3845000 1522 164 1543 6894;6895;6896;6897;6898 4631;4632 4632 2 DSYVGDEAQSKR VMVGMGQKDSYVGDEA GDEAQSKRGILTLKYP K D S K R G 1 1 0 2 0 1 1 1 0 0 0 1 0 0 0 2 0 0 1 1 0 12 1 1353.6161 F5H0N0;B4E335;P63261;P60709;I3L3I4;G5E9R0;I3L3R2;E7EVS6;I3L3I0;I3L1U9;E7EQV5;Q5T8M8;A6NL76;P68133;P68032;Q5T8M7;F5H1C1;P63267;P62736;C9JUM1;C9JZR7;C9JTX5;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;I3L4N8;B4DUI8 F5H0N0 51 62 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle yes no 2;3 0.016998 70.089 By MS/MS By matching By matching By MS/MS By matching By matching 2 2 2 2 2 1 5688400 967530 860300 965320 730760 1467800 696730 1523 164 1544 6899;6900;6901;6902;6903;6904;6905;6906;6907;6908;6909 4633;4634 4634 2 DTAASGYGTQNIR YTYHEKKKDTAASGYG GYGTQNIRLSRDAVKD K D T I R L 2 1 1 1 0 1 0 2 0 1 0 0 0 0 0 1 2 0 1 0 0 13 0 1352.6321 Q9Y314 Q9Y314 22 34 NOSIP Nitric oxide synthase-interacting protein yes yes 2 1.7752E-34 120.84 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 17493000 2395700 2690000 2461400 762190 2823700 6360300 1524 1642 1545 6910;6911;6912;6913;6914;6915;6916 4635;4636;4637;4638;4639;4640 4637 6 DTAASGYGTQNIRLSR YTYHEKKKDTAASGYG TQNIRLSRDAVKDFDC K D T S R D 2 2 1 1 0 1 0 2 0 1 1 0 0 0 0 2 2 0 1 0 0 16 1 1708.8493 Q9Y314 Q9Y314 22 37 NOSIP Nitric oxide synthase-interacting protein yes yes 3 0.002385 63.181 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 23080000 0 6753600 5344200 1573000 2551600 6857800 1525 1642 1546 6917;6918;6919;6920;6921 4641;4642 4642 2 DTAASGYGTQNIRLSRDAVK YTYHEKKKDTAASGYG RLSRDAVKDFDCCCLS K D T V K D 3 2 1 2 0 1 0 2 0 1 1 1 0 0 0 2 2 0 1 1 0 20 2 2122.0767 Q9Y314 Q9Y314 22 41 NOSIP Nitric oxide synthase-interacting protein yes yes 3 0.0011952 59.728 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 9978100 0 4747200 2704000 670570 496420 1359800 1526 1642 1547 6922;6923;6924;6925;6926 4643;4644 4644 2 DTALETALNAK EVVVCMRRDTALETAL LETALNAKAYKRSKRQ R D T A K A 3 0 1 1 0 0 1 0 0 0 2 1 0 0 0 0 2 0 0 0 0 11 0 1145.5928 P51532-5;P51532-2;P51532-3;P51532-4;P51532;Q9HBD4;F5H0X5 P51532-5 427 437 SMARCA4 Transcription activator BRG1 yes no 2 0.028546 73.9 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 11780000 1923900 0 3307400 0 2259600 4289300 1527 952 1548 6927;6928;6929;6930 4645;4646 4645 0 DTARGQNLLQTQDHAK LPDTELMKDTARGQNL LQTQDHAKAPKSEKGK K D T A K A 2 1 1 2 0 3 0 1 1 0 2 1 0 0 0 0 2 0 0 0 0 16 1 1794.8973 P46013;F5H4V4;P46013-2 P46013 978 993 MKI67 Antigen KI-67 no no 3 5.7045E-27 110.97 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 32408000 0 9001100 4991300 1862000 5809000 10744000 1528 919;920 1549 6931;6932;6933;6934;6935 4647;4648;4649;4650;4651;4652 4651 5 DTARGQNLLQTQDHAKAPK LPDTELMKDTARGQNL QDHAKAPKSEKGKITK K D T P K S 3 1 1 2 0 3 0 1 1 0 2 2 0 0 1 0 2 0 0 0 0 19 2 2091.0821 P46013;F5H4V4;P46013-2 P46013 978 996 MKI67 Antigen KI-67 no no 3;4 2.3331E-26 105.99 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 501240000 32714000 73906000 140190000 54292000 65027000 135120000 1529 919;920 1550 6936;6937;6938;6939;6940;6941;6942;6943;6944;6945;6946;6947 4653;4654;4655;4656;4657;4658;4659;4660;4661;4662 4656 10 DTEAGETFSSVQANLSK PKTKKARKDTEAGETF SVQANLSKAEKHKYPH K D T S K A 2 0 1 1 0 1 2 1 0 0 1 1 0 1 0 3 2 0 0 1 0 17 0 1782.8272 P35251-2;P35251 P35251-2 244 260 RFC1 Replication factor C subunit 1 yes no 2 0 276.14 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 182610000 41325000 52959000 22297000 35847000 0 30188000 1530 896 1551 6948;6949;6950;6951;6952 4663;4664;4665;4666;4667 4663 5 DTFEHDPSESIDEFNK SKSQEEPKDTFEHDPS ESIDEFNKSSATSGDI K D T N K S 0 0 1 3 0 0 3 0 1 1 0 1 0 2 1 2 1 0 0 0 0 16 0 1908.8014 Q9NYF8-2;Q9NYF8;Q9NYF8-4;E9PK09;E9PQN2;E9PKI6;E9PJA7;Q9NYF8-3;E9PK91 Q9NYF8-2 187 202 BCLAF1 Bcl-2-associated transcription factor 1 no no 2;3 0 263.72 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 134450000 38981000 11992000 36867000 9093800 9902300 27617000 1531 1563;452 1552 6953;6954;6955;6956;6957;6958;6959;6960;6961;6962;6963 4668;4669;4670;4671;4672;4673;4674;4675;4676;4677 4671 10 DTGDIFCTR FNLFYIEKDTGDIFCT TGDIFCTRSIDREKYE K D T T R S 0 1 0 2 1 0 0 1 0 1 0 0 0 1 0 0 2 0 0 0 0 9 0 1083.4655 Q08554-2;Q08554 Q08554-2 190 198 DSC1 Desmocollin-1 yes no 2 0.024935 67.113 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 6595400 279700 2801200 1211300 751020 544130 1008000 1532 1047 1553 6964;6965;6966;6967;6968;6969 4678;4679 4679 2 DTGKTPVEPEVAIHR ________________ EPEVAIHRIRITLTSR K D T H R I 1 1 0 1 0 0 2 1 1 1 0 1 0 0 2 0 2 0 0 2 0 15 1 1647.858 P60866;P60866-2;E5RJX2;E5RIP1 P60866 5 19 RPS20 40S ribosomal protein S20 yes no 3;4 2.7567E-147 157.35 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 2 2 2 33449000 9192500 1839700 1197800 4353600 11374000 5491000 1533 979 1554 6970;6971;6972;6973;6974;6975;6976;6977;6978;6979 4680;4681;4682;4683;4684;4685;4686;4687 4681 8 DTGKTPVEPEVAIHRIR ________________ EVAIHRIRITLTSRNV K D T I R I 1 2 0 1 0 0 2 1 1 2 0 1 0 0 2 0 2 0 0 2 0 17 2 1917.0432 P60866;P60866-2;E5RJX2;E5RIP1 P60866 5 21 RPS20 40S ribosomal protein S20 yes no 4 0.0018608 63.212 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 18224000 0 3738800 0 2889600 6801200 4794300 1534 979 1555 6980;6981;6982;6983 4688;4689;4690;4691 4690 4 DTITFEVTVNYEGISYK KDINAEEKDTITFEVT NYEGISYKWLKNGVEI K D T Y K W 0 0 1 1 0 0 2 1 0 2 0 1 0 1 0 1 3 0 2 2 0 17 0 1977.9571 E7ENC6;Q8WZ42-3;Q8WZ42-10;Q8WZ42-9;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42;Q8WZ42-8;Q8WZ42-6 E7ENC6 2938 2954 TTN Titin yes no 3 0.0034172 48.899 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 4381500 427950 720720 712650 654770 890520 974850 1535 349 1556 6984;6985;6986;6987;6988;6989 4692 4692 1 DTMSTGLTGAANVAK KSMVMGTKDTMSTGLT TGAANVAKGAMQTGLN K D T A K G 3 0 1 1 0 0 0 2 0 0 1 1 1 0 0 1 3 0 0 1 0 15 0 1435.6977 Q96Q06-2;Q96Q06 Q96Q06-2 387 401 PLIN4 Perilipin-4 yes no 2 0.0031844 57.414 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4696400 0 845620 643880 0 1341800 1865100 1536 1413 1557 6990;6991;6992;6993 4693;4694 4694 2 DTQSVSAIGEEK AVAKDKYKDTQSVSAI VSAIGEEKSHESKHQE K D T E K S 1 0 0 1 0 1 2 1 0 1 0 1 0 0 0 2 1 0 0 1 0 12 0 1262.599 E9PDD9;Q9NW13;H7C5G8;C9JAA9 E9PDD9 56 67 RBM28 RNA-binding protein 28 yes no 2 0.00023449 95.273 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 6271100 0 830980 955670 556690 1844700 2083100 1537 422 1558 6994;6995;6996;6997;6998 4695;4696;4697;4698 4697 4 DTRASANLRPK RRGRGSQKDTRASANL ASANLRPKTQPHHSTP K D T P K T 2 2 1 1 0 0 0 0 0 0 1 1 0 0 1 1 1 0 0 0 0 11 2 1227.6684 Q12789-3;Q12789;H7BYG6 Q12789-3 497 507 GTF3C1 General transcription factor 3C polypeptide 1 yes no 3 0.018739 70.728 By matching By matching By MS/MS By matching By matching By matching 1 1311700 0 0 1311700 0 0 0 1538 1059 1559 6999 4699 4699 1 DTSIQEVVSRPSSK NFRQKSMKDTSIQEVV VVSRPSSKRMTSHTTK K D T S K R 0 1 0 1 0 1 1 0 0 1 0 1 0 0 1 4 1 0 0 2 0 14 1 1531.7842 Q8IWC1-2;Q8IWC1;H7BY77;Q8IWC1-3 Q8IWC1-2 779 792 MAP7D3 MAP7 domain-containing protein 3 yes no 2;3 0.0011283 73.927 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 1 1 1 15198000 3080400 4444700 2102100 0 1213600 4357200 1539 1280 1560 7000;7001;7002;7003;7004;7005;7006 4700;4701;4702;4703;4704;4705;4706 4701 7 DTSKPTPGTSLFTPSEGAASK SKRSKSGKDTSKPTPG PSEGAASKKEVQGRSG K D T S K K 2 0 0 1 0 0 1 2 0 0 1 2 0 1 3 4 4 0 0 0 0 21 1 2078.0168 O15014 O15014 98 118 ZNF609 Zinc finger protein 609 yes yes 3 0.0010928 52.769 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 10592000 2666500 0 4965200 0 280290 2680100 1540 701 1561 7007;7008;7009;7010 4707;4708;4709;4710 4707 4 DTTSQHRAHLFDLNCK DVFSSMLKDTTSQHRA HLFDLNCKICTGQVPS K D T C K I 1 1 1 2 1 1 0 0 2 0 2 1 0 1 0 1 2 0 0 0 0 16 1 1941.9115 Q9BTC0;Q9BTC0-1 Q9BTC0 839 854 DIDO1 Death-inducer obliterator 1 yes no 4 0.0097879 45.722 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 10487000 0 0 3361600 1693200 2087900 3344700 1541 1447 1562 7011;7012;7013;7014 4711;4712 4711 2 DTTSQHRQHLFDLNCK EEVDSMSKDTTSQHRQ HLFDLNCKICIGRMAP K D T C K I 0 1 1 2 1 2 0 0 2 0 2 1 0 1 0 1 2 0 0 0 0 16 1 1998.933 Q92576-2;Q92576;E7EVH3;E7ER40 Q92576-2 1016 1031 PHF3 PHD finger protein 3 yes no 4 0.0056664 49.216 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 28493000 0 0 0 10966000 5169300 12358000 1542 1353 1563 7015;7016;7017 4713;4714;4715 4715 3 DTVCSGVTGAANVAK KIVLTGTKDTVCSGVT TGAANVAKGAVQGGLD K D T A K G 3 0 1 1 1 0 0 2 0 0 0 1 0 0 0 1 2 0 0 3 0 15 0 1448.6929 Q96Q06-2;Q96Q06 Q96Q06-2 453 467 PLIN4 Perilipin-4 yes no 2 0.0078274 49.265 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 11902000 0 3401900 0 756800 3359200 4383900 1543 1413 1564 7018;7019;7020;7021 4716 4716 1 DTVCSGVTGAVNVAK KTVLTGTKDTVCSGVT TGAVNVAKGAVQTGLK K D T A K G 2 0 1 1 1 0 0 2 0 0 0 1 0 0 0 1 2 0 0 4 0 15 0 1476.7242 Q96Q06-2;Q96Q06 Q96Q06-2 750 764 PLIN4 Perilipin-4 yes no 2 0.008098 48.899 By matching By MS/MS By matching By matching By matching By matching 1 1 1 3864400 0 1208400 721820 0 0 1934200 1544 1413 1565 7022;7023;7024 4717 4717 1 DTVCSGVTSAVNVAK KTVLTGTKDTVCSGVT TSAVNVAKGAVQGGLD K D T A K G 2 0 1 1 1 0 0 1 0 0 0 1 0 0 0 2 2 0 0 4 0 15 0 1506.7348 Q96Q06-2;Q96Q06 Q96Q06-2 519 533 PLIN4 Perilipin-4 yes no 2 0.0024349 59.884 By matching By matching By matching By matching By matching By MS/MS 1 1 1593700 0 0 0 0 312040 1281600 1545 1413 1566 7025;7026 4718 4718 1 DVACGANHTLVLDSQK PVPNVVVRDVACGANH TLVLDSQKRVFSWGFG R D V Q K R 2 0 1 2 1 1 0 1 1 0 2 1 0 0 0 1 1 0 0 2 0 16 0 1726.8308 Q9P258 Q9P258 334 349 RCC2 Protein RCC2 yes yes 2;3 7.2297E-05 86.777 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 1 1 2 1 46267000 8051900 16910000 5358500 0 4719400 11227000 1546 1575 1567 7027;7028;7029;7030;7031;7032;7033;7034;7035 4719;4720;4721;4722;4723;4724;4725;4726 4719 8 DVACGANHTLVLDSQKR PVPNVVVRDVACGANH LVLDSQKRVFSWGFGG R D V K R V 2 1 1 2 1 1 0 1 1 0 2 1 0 0 0 1 1 0 0 2 0 17 1 1882.9319 Q9P258 Q9P258 334 350 RCC2 Protein RCC2 yes yes 3 0.0010604 55.755 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 8210100 1665700 2663800 1189600 1139000 0 1551900 1547 1575 1568 7036;7037;7038;7039;7040 4727;4728;4729;4730 4729 3 DVASEVNLTAYKPK ITFDDEPKDVASEVNL NLTAYKPKYFTSAAMG K D V P K Y 2 0 1 1 0 0 1 0 0 0 1 2 0 0 1 1 1 0 1 2 0 14 1 1533.8039 Q9H501 Q9H501 482 495 ESF1 ESF1 homolog yes yes 3 0.0011633 77.776 By matching By MS/MS By matching By matching By matching By matching 1 4551000 0 4551000 0 0 0 0 1548 1490 1569 7041 4731 4731 1 DVDHRRDDPYWSENK RNSLKRPRDVDHRRDD DPYWSENKKLSLDTDA R D V N K K 0 2 1 4 0 0 1 0 1 0 0 1 0 0 1 1 0 1 1 1 0 15 2 1930.8558 Q9NWH9;H7C3F4;A8K5V8 Q9NWH9 731 745 SLTM SAFB-like transcription modulator yes no 4 0.0040713 53.946 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 5971800 0 303340 876390 754590 2067400 1970100 1549 1554 1570 7042;7043;7044;7045;7046 4732 4732 1 DVDYSDALTEK GRGSRQRRDVDYSDAL YSDALTEKQWLRAIED R D V E K Q 1 0 0 3 0 0 1 0 0 0 1 1 0 0 0 1 1 0 1 1 0 11 0 1254.5616 P51531-2;P51531 P51531-2 1313 1323 SMARCA2 Probable global transcription activator SNF2L2 yes no 2 0.0060017 70.728 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 7127100 612600 1808300 881740 0 0 3824400 1550 951 1571 7047;7048;7049;7050 4733;4734 4733 2 DVEDMFSR LPRTMTQKDVEDMFSR DVEDMFSRFGRIINSR K D V S R F 0 1 0 2 0 0 1 0 0 0 0 0 1 1 0 1 0 0 0 1 0 8 0 997.4175 Q15717 Q15717 121 128 ELAVL1 ELAV-like protein 1 yes yes 2 0.00148 111.74 By matching By matching By matching By matching By matching By MS/MS 1 1 6767900 0 0 0 941140 0 5826800 1551 1146 1572 7051;7052 4735 4735 1 DVEEEKFPTQLSR FRGKAAVKDVEEEKFP KFPTQLSRHIKFGQKS K D V S R H 0 1 0 1 0 1 3 0 0 0 1 1 0 1 1 1 1 0 0 1 0 13 1 1576.7733 B4E3L0;Q2TAY7 B4E3L0 34 46 SMU1 WD40 repeat-containing protein SMU1 yes no 3 0.0022757 68.463 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 5413300 833110 0 0 0 1659400 2920800 1552 167 1573 7053;7054;7055 4736;4737 4736 2 DVESVQTPSK DQNKGKGRDVESVQTP ESVQTPSKAVGASFPL R D V S K A 0 0 0 1 0 1 1 0 0 0 0 1 0 0 1 2 1 0 0 2 0 10 0 1088.535 P46013;F5H4V4 P46013 322 331 MKI67 Antigen KI-67 yes no 2 0.0087186 79.659 By matching By matching By matching By matching By matching By MS/MS 1 1 2220000 0 0 0 0 613950 1606100 1553 919 1574 7056;7057 4738 4738 1 DVETTSSVSVK ESRNLEKKDVETTSSV TTSSVSVKRKRRLEDA K D V V K R 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 3 2 0 0 3 0 11 0 1150.5717 Q96RL1;F8VQY2;Q96RL1-2;D6RC40;D6RCQ3;D6RCF3;Q96RL1-5;D6RDZ5;D6R9M3 Q96RL1 21 31 UIMC1 BRCA1-A complex subunit RAP80 yes no 2 0.014605 75.819 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 1554 535 1575 7058 4739 4739 1 DVIEEYFKCKK YGKESQAKDVIEEYFK EEYFKCKK________ K D V K K - 0 0 0 1 1 0 2 0 0 1 0 3 0 1 0 0 0 0 1 1 0 11 2 1457.7225 P25398 P25398 122 132 RPS12 40S ribosomal protein S12 yes yes 3 4.6582E-08 112.3 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 17795000 13687000 1847400 0 2260600 0 0 1555 875 1576 7059;7060;7061 4740;4741 4741 2 DVILYEK NTPVFRMRDVILYEKR RDVILYEKRIYLLECK R D V E K R 0 0 0 1 0 0 1 0 0 1 1 1 0 0 0 0 0 0 1 1 0 7 0 878.47493 CON__P06868 CON__P06868 97 103 yes yes 2 0.026083 86.794 By MS/MS By MS/MS By matching By matching By matching By matching 2 1 1 2 1 11778000 4086400 1246500 0 1232400 3401900 1810900 + 1556 295 1577 7062;7063;7064;7065;7066;7067;7068 4742;4743 4742 2 DVLTGQEFDVRAK RVSGARCKDVLTGQEF QEFDVRAKCVINATGP K D V A K C 1 1 0 2 0 1 1 1 0 0 1 1 0 1 0 0 1 0 0 2 0 13 1 1476.7573 P43304;F5GYK7;P43304-2;F8W6E4 P43304 272 284 GPD2 Glycerol-3-phosphate dehydrogenase, mitochondrial yes no 3 0.0096279 56.139 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 2499700 0 808140 0 778680 0 912850 1557 918 1578 7069;7070;7071 4744;4745 4744 2 DVMEGVTVDDHMMK EVVKIIEKDVMEGVTV TVDDHMMKVETVHCSA K D V M K V 0 0 0 3 0 0 1 1 1 0 0 1 3 0 0 0 1 0 0 3 0 14 0 1605.6837 Q5BKZ1;Q5BKZ1-3 Q5BKZ1 388 401 ZNF326 DBIRD complex subunit ZNF326 yes no 2 2.1667E-30 113.52 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 4423300 2648300 955230 0 819780 0 0 1558 1177 1579 7072;7073;7074;7075 4746;4747;4748;4749 4747 4 DVNAAIAAIKTK YRGDVVPKDVNAAIAA AIAAIKTKRSIQFVDW K D V T K R 4 0 1 1 0 0 0 0 0 2 0 2 0 0 0 0 1 0 0 1 0 12 1 1213.703 A8MUB1;P68366 A8MUB1 312 323 TUBA4A Tubulin alpha-4A chain yes no 2 0.009346 68.972 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 6032200 3809000 0 0 492120 0 1731100 1559 44 1580 7076;7077;7078 4750;4751 4751 2 DVNAAIATIK YRGDVVPKDVNAAIAT NAAIATIKTKRTIQFV K D V I K T 3 0 1 1 0 0 0 0 0 2 0 1 0 0 0 0 1 0 0 1 0 10 0 1014.571 G3V1U9;Q9BQE3;Q71U36;P68363;F5H5D3;F8VXZ4;Q6PEY2;Q13748;E9PGK3;Q13748-2 G3V1U9 292 301 TUBA1A;TUBA1C;TUBA1B;TUBA3E;TUBA3C Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain yes no 2 0.0027222 98.754 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 14723000 1239100 3876200 1804200 705130 0 7098800 1560 518 1581 7079;7080;7081;7082;7083 4752;4753;4754 4753 3 DVNAAIATIKTK YRGDVVPKDVNAAIAT AIATIKTKRTIQFVDW K D V T K R 3 0 1 1 0 0 0 0 0 2 0 2 0 0 0 0 2 0 0 1 0 12 1 1243.7136 G3V1U9;Q9BQE3;Q71U36;P68363;F5H5D3;F8VXZ4;Q6PEY2;Q13748;E9PGK3;Q13748-2 G3V1U9 292 303 TUBA1A;TUBA1C;TUBA1B;TUBA3E;TUBA3C Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain yes no 2;3 7.0711E-97 149.82 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 4 4 3 187690000 16886000 38828000 20199000 16866000 35567000 59340000 1561 518 1582 7084;7085;7086;7087;7088;7089;7090;7091;7092;7093;7094;7095;7096;7097;7098;7099;7100 4755;4756;4757;4758;4759;4760;4761;4762;4763 4762 9 DVNAAIATIKTKR YRGDVVPKDVNAAIAT IATIKTKRTIQFVDWC K D V K R T 3 1 1 1 0 0 0 0 0 2 0 2 0 0 0 0 2 0 0 1 0 13 2 1399.8147 G3V1U9;Q9BQE3;Q71U36;P68363;F5H5D3;F8VXZ4;Q6PEY2;Q13748;E9PGK3;Q13748-2 G3V1U9 292 304 TUBA1A;TUBA1C;TUBA1B;TUBA3E;TUBA3C Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain yes no 3 0.0069675 70.628 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 10885000 1159700 3321400 1277800 0 1335600 3790600 1562 518 1583 7101;7102;7103;7104;7105 4764;4765;4766;4767 4765 4 DVNEGETSDGVRK NSTKSQDKDVNEGETS ETSDGVRKSVHKVFAS K D V R K S 0 1 1 2 0 0 2 2 0 0 0 1 0 0 0 1 1 0 0 2 0 13 1 1404.6481 Q9Y5Q9-2;Q9Y5Q9 Q9Y5Q9-2 68 80 GTF3C3 General transcription factor 3C polypeptide 3 yes no 3 0.0042019 57.52 By matching By matching By MS/MS By matching By matching By matching 1 1 1429600 0 619960 809640 0 0 0 1563 1656 1584 7106;7107 4768 4768 1 DVNPGGKEETPGQRPAVTETHQLAELNEK FRLMLLEKDVNPGGKE QLAELNEKKNERLRAA K D V E K K 2 1 2 1 0 2 5 3 1 0 2 2 0 0 3 0 3 0 0 2 0 29 2 3143.5483 Q9UQ35;Q9UQ35-2;I3L2L6;I3L182;Q9UQ39;I3L4D8;I3L1C0;I3L1I8;Q9UQ35-3 Q9UQ35 102 130 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 4 0.00010836 44.184 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 5442300 0 1811300 0 1139600 0 2491400 1564 1623 1585 7108;7109;7110 4769;4770;4771 4770 3 DVQTALALAK PADVTSEKDVQTALAL QTALALAKGKFGRVDV K D V A K G 3 0 0 1 0 1 0 0 0 0 2 1 0 0 0 0 1 0 0 1 0 10 0 1028.5866 Q5H928;Q99714-2;Q99714 Q5H928 70 79 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 2 0.01037 73.499 By matching By matching By matching By matching By MS/MS By matching 1 1740100 0 0 0 0 1740100 0 1565 1181 1586 7111 4772 4772 1 DVQTALALAKGK PADVTSEKDVQTALAL ALALAKGKFGRVDVAV K D V G K F 3 0 0 1 0 1 0 1 0 0 2 2 0 0 0 0 1 0 0 1 0 12 1 1213.703 Q5H928;Q99714-2;Q99714 Q5H928 70 81 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 2;3 9.1227E-07 102.33 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 2 21624000 4604600 0 7237400 3715800 0 6066100 1566 1181 1587 7112;7113;7114;7115;7116 4773;4774;4775;4776 4775 4 DVRQSLSPMSQRPVLK RKRTPMPKDVRQSLSP MSQRPVLKVCNHENQK K D V L K V 0 2 0 1 0 2 0 0 0 0 2 1 1 0 2 3 0 0 0 2 0 16 2 1839.9989 Q9NSV4-6;A8MYX0;Q9NSV4-5;C9JL55;Q9NSV4-4;C9JDG1;Q9NSV4;C9JDG0;Q9NSV4-1;A6NG52;Q9NSV4-7 Q9NSV4-6 1017 1032 DIAPH3 Protein diaphanous homolog 3 yes no 3 0.019432 47.639 By matching By matching By matching By matching By matching By MS/MS 1 1810800 0 0 0 0 0 1810800 1567 54 1588 7117 4777 4777 1 DVRWPTETDVSSAK EKEVALVKDVRWPTET ETDVSSAKNVVLPTET K D V A K N 1 1 0 2 0 0 1 0 0 0 0 1 0 0 1 2 2 1 0 2 0 14 1 1589.7686 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0 336 349 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 1.4202E-20 112.02 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 8483300 0 1732500 0 1738200 2542100 2470500 1568 388 1589 7118;7119;7120;7121 4778;4779;4780 4778 3 DVSGLRDVK GSCSRTPRDVSGLRDV VSGLRDVKMVKKAKTM R D V V K M 0 1 0 2 0 0 0 1 0 0 1 1 0 0 0 1 0 0 0 2 0 9 1 987.53491 Q9BZE4;B7Z7A3;B4DY13 Q9BZE4 576 584 GTPBP4 Nucleolar GTP-binding protein 1 yes no 2 0.019606 88.495 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5246200 1025400 945700 0 0 1047000 2228200 1569 1471 1590 7122;7123;7124;7125 4781 4781 1 DVSHEIIQHEVK EKIQKFTKDVSHEIIQ EIIQHEVKSSKNSASS K D V V K S 0 0 0 1 0 1 2 0 2 2 0 1 0 0 0 1 0 0 0 2 0 12 0 1432.731 Q7Z6E9;Q7Z6E9-2;Q7Z6E9-4 Q7Z6E9 1379 1390 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 3 9.8552E-05 98.182 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 10902000 2547600 1675500 1184800 968580 1996000 2529600 1570 1255 1591 7126;7127;7128;7129;7130;7131;7132 4782;4783;4784;4785;4786 4783 5 DVSQSSIYSQTEEK YGENGVQKDVSQSSIY IYSQTEEKAQGKSQKQ K D V E K A 0 0 0 1 0 2 2 0 0 1 0 1 0 0 0 4 1 0 1 1 0 14 0 1599.7264 P04279 P04279 308 321 SEMG1 Semenogelin-1;Alpha-inhibin-92;Alpha-inhibin-31;Seminal basic protein yes yes 2 0.0023694 64.104 By matching By matching By matching By matching By MS/MS By matching 1 2248100 0 0 0 0 2248100 0 1571 790 1592 7133 4787 4787 1 DVSQSSIYSQTEEKAQGK YGENGVQKDVSQSSIY TEEKAQGKSQKQITIP K D V G K S 1 0 0 1 0 3 2 1 0 1 0 2 0 0 0 4 1 0 1 1 0 18 1 1983.9385 P04279 P04279 308 325 SEMG1 Semenogelin-1;Alpha-inhibin-92;Alpha-inhibin-31;Seminal basic protein yes yes 3 0.018052 39.338 By matching By matching By matching By matching By MS/MS By matching 1 1078500 0 0 0 0 1078500 0 1572 790 1593 7134 4788 4788 1 DVTDKPLDLSSK LEKQTVTKDVTDKPLD KPLDLSSKVVDVDASK K D V S K V 0 0 0 3 0 0 0 0 0 0 2 2 0 0 1 2 1 0 0 1 0 12 1 1316.6824 Q6W2J9;Q6W2J9-4;Q6W2J9-2;H7BYY2;Q6W2J9-3 Q6W2J9 435 446 BCOR BCL-6 corepressor yes no 3 0.036448 45.764 By matching By MS/MS By matching By matching By matching By matching 1 2639400 0 2639400 0 0 0 0 1573 1237 1594 7135 4789 4789 1 DVVICPDASLEDAK KDPVQCSRDVVICPDA DASLEDAKKEGPYDVV R D V A K K 2 0 0 3 1 0 1 0 0 1 1 1 0 0 1 1 0 0 0 2 0 14 0 1530.7236 Q99497 Q99497 49 62 PARK7 Protein DJ-1 yes yes 2 0.01223 49.298 By matching By MS/MS By matching By matching By matching By matching 1 10102000 0 10102000 0 0 0 0 1574 1425 1595 7136 4790 4790 1 DVYLSPRDDGYSTK REPLPSRRDVYLSPRD RDDGYSTKDSYSSRDY R D V T K D 0 1 0 3 0 0 0 1 0 0 1 1 0 0 1 2 1 0 2 1 0 14 1 1614.7526 Q96E39;B3KRG5;H3BUY5;H3BT71;P38159-2;P38159;H0Y6E7 Q96E39 204 217 RBMXL1;RBMX RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed no no 3 0.0041189 58.32 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 11901000 0 1536200 1133400 624290 4513700 4093500 1575 1379;649 1596 7137;7138;7139;7140;7141 4791;4792 4792 2 DWANQRCSSPK SPKVQAVKDWANQRCS NQRCSSPKGSARNSLV K D W P K G 1 1 1 1 1 1 0 0 0 0 0 1 0 0 1 2 0 1 0 0 0 11 1 1347.599 P38432 P38432 210 220 COIL Coilin yes yes 3 0.013034 61.593 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1670700 369570 563850 100450 0 0 636800 1576 904 1597 7142;7143;7144;7145 4793 4793 1 DYAFIHFDERDGAVK LERVKKLKDYAFIHFD DERDGAVKAMEEMNGK K D Y V K A 2 1 0 3 0 0 1 1 1 1 0 1 0 2 0 0 0 0 1 1 0 15 1 1781.8373 O60506-2;O60506;O60506-4;O60506-3;O60506-5 O60506-2 337 351 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 3 0.00055069 83.243 By matching By matching By matching By MS/MS By matching By matching 1 16304000 0 0 0 16304000 0 0 1577 731 1598 7146 4794 4794 1 DYAFVHFEDRGAAVK LERVKKLKDYAFVHFE EDRGAAVKAMDEMNGK K D Y V K A 3 1 0 2 0 0 1 1 1 0 0 1 0 2 0 0 0 0 1 2 0 15 1 1723.8318 O43390;O43390-2;E7ETM7;Q2L7G6 O43390 375 389 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes no 3 0.00086017 77.204 By matching By matching By matching By matching By MS/MS By matching 1 6053600 0 0 0 0 6053600 0 1578 715 1599 7147 4795 4795 1 DYAFVHMER VIECDIVKDYAFVHME YAFVHMERAEDAVEAI K D Y E R A 1 1 0 1 0 0 1 0 1 0 0 0 1 1 0 0 0 0 1 1 0 9 0 1166.5179 Q9BWF3;E9PB51;Q9BQ04;E7EQS3;Q9BWF3-3;D6R9K7;Q9BWF3-2;E9PLB0;E9PM61 Q9BWF3 112 120 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 2 0.011235 83.499 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 17631000 1793500 1556600 5703800 1043000 2606300 4927600 1579 1457 1600 7148;7149;7150;7151;7152;7153 4796;4797;4798 4796 3 DYDDMSPR RPMPPSRRDYDDMSPR DYDDMSPRRGPPPPPP R D Y P R R 0 1 0 3 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 8 0 997.38111 P61978-3;P61978-2;B4DFF1;P61978;Q5T6W5;Q5T6W2;Q5T6W1 P61978-3 255 262 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.0063494 95.741 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 11441000 0 1739800 0 622910 1987400 7091100 1580 984 1601 7154;7155;7156;7157 4799;4800 4799 2 DYGNSPLHR QEDQGLTKDYGNSPLH YGNSPLHRFKKPGSKN K D Y H R F 0 1 1 1 0 0 0 1 1 0 1 0 0 0 1 1 0 0 1 0 0 9 0 1057.4941 P26599;P26599-2;P26599-3;A6NLN1 P26599 429 437 PTBP1 Polypyrimidine tract-binding protein 1 yes no 2 0.0061685 93.178 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 83964000 2001200 9131200 8594100 4254500 15737000 44246000 1581 882 1602 7158;7159;7160;7161;7162;7163 4801;4802;4803;4804;4805 4804 5 DYHFKVDNDENEHQLSLR GCELKADKDYHFKVDN NEHQLSLRTVSLGAGA K D Y L R T 0 1 2 3 0 1 2 0 2 0 2 1 0 1 0 1 0 0 1 1 0 18 1 2258.0352 P06748-2;P06748;P06748-3;E5RGW4 P06748-2 28 45 NPM1 Nucleophosmin yes no 4 0.011286 41.367 By matching By matching By matching By matching By matching By MS/MS 1 1 1 7726000 0 2288900 0 940510 0 4496600 1582 801 1603 7164;7165;7166 4806 4806 1 DYIQKHPELNISEEGITK VRPDEIMRDYIQKHPE ISEEGITKSTLTKAER R D Y T K S 0 0 1 1 0 1 3 1 1 3 1 2 0 0 1 1 1 0 1 0 0 18 1 2113.0691 E9PKP7;P17480-2;P17480 E9PKP7 225 242 UBTF Nucleolar transcription factor 1 yes no 3 0.0018893 54.355 By matching By MS/MS By matching By matching By matching By matching 1 1 15333000 0 14188000 0 1144900 0 0 1583 455 1604 7167;7168 4807 4807 1 DYKLVGDQEDHGSAK IWRSVKLKDYKLVGDQ QEDHGSAKRICGRRKR K D Y A K R 1 0 0 3 0 1 1 2 1 0 1 2 0 0 0 1 0 0 1 1 0 15 1 1660.7693 O43167;O43167-2 O43167 266 280 ZBTB24 Zinc finger and BTB domain-containing protein 24 yes no 3 0.0091032 47.774 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 5121100 669460 642960 884930 904260 1161700 857760 1584 710 1605 7169;7170;7171;7172;7173;7174 4808;4809 4808 2 DYLPVGQRMPGTR NHIPERWKDYLPVGQR GQRMPGTRFIAFKVPL K D Y T R F 0 2 0 1 0 1 0 2 0 0 1 0 1 0 2 0 1 0 1 1 0 13 1 1488.7507 O75319;O75319-2;C9JGC8;C9JYA6;H7C0E6 O75319 37 49 DUSP11 RNA/RNP complex-1-interacting phosphatase yes no 3 0.019523 49.081 By matching By matching By matching By matching By matching By MS/MS 1 1 3212800 0 0 0 562510 0 2650300 1585 739 1606 7175;7176 4810 4810 1 DYRQSSGASSSSFSSSR FSGGFGARDYRQSSGA SSSFSSSRASSSRSGG R D Y S R A 1 2 0 1 0 1 0 1 0 0 0 0 0 1 0 9 0 0 1 0 0 17 1 1794.7769 O00571;O00571-2;B4DLU5 O00571 601 617 DDX3X ATP-dependent RNA helicase DDX3X yes no 3 5.5902E-08 93.342 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 2 62554000 7223400 7033300 7239700 6898500 11224000 22935000 1586 693 1607 7177;7178;7179;7180;7181;7182;7183;7184 4811;4812;4813;4814;4815;4816;4817 4812 7 DYRQSSGASSSSFSSSRASSSR FSGGFGARDYRQSSGA SSRASSSRSGGGGHGS R D Y S R S 2 3 0 1 0 1 0 1 0 0 0 0 0 1 0 12 0 0 1 0 0 22 2 2283.0112 O00571;O00571-2;B4DLU5 O00571 601 622 DDX3X ATP-dependent RNA helicase DDX3X yes no 4 2.6698E-06 64.26 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 8798400 1645600 0 1949300 1765800 1977800 1460000 1587 693 1608 7185;7186;7187;7188;7189 4818;4819;4820;4821;4822;4823 4820 6 DYYNPQPYPSYEGGAGTPSGTAAAVAADKYHRGSK DRQRLLAKDYYNPQPY DKYHRGSKALPTQQGL K D Y S K A 6 1 1 2 0 1 1 5 1 0 0 2 0 0 4 3 2 0 5 1 0 35 2 3645.6761 Q7Z5J4-3;E7EVZ3;Q7Z5J4;A8MTC3;Q7Z5J4-2;C9JWB0;A8MXE8;Q7Z5J4-4;E7ETW1 Q7Z5J4-3 49 83 RAI1 Retinoic acid-induced protein 1 yes no 4;5 1.822E-62 94.891 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 1 198920000 31962000 15902000 52011000 28744000 40210000 30097000 1588 39 1609 7190;7191;7192;7193;7194;7195;7196;7197;7198;7199;7200 4824;4825;4826;4827;4828;4829;4830;4831;4832;4833;4834;4835 4825 12 EAAACTSALCCMGR ARWDLLAKEAAACTSA SALCCMGRNGIPIQPW K E A G R N 4 1 0 0 3 0 1 1 0 0 1 0 1 0 0 1 1 0 0 0 0 14 0 1556.6204 F8VW22;F5GWB8;Q9Y6K5 F8VW22 39 52 OAS3 2-5-oligoadenylate synthase 3 yes no 2 0.0019522 66.215 By matching By matching By matching By matching By matching By MS/MS 1 1 1978800 0 0 393540 0 0 1585300 1589 482 1610 7201;7202 4836 4836 1 EAACESSTPSWASDHNYNAVKPEK ARSEALGKEAACESST YNAVKPEKTAAPSPSL K E A E K T 4 0 2 1 1 0 3 0 1 0 0 2 0 0 2 4 1 1 1 1 0 24 1 2677.1715 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 495 518 DIDO1 Death-inducer obliterator 1 yes no 4 3.9061E-09 65.915 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 77320000 21769000 16115000 20982000 0 7386800 11067000 1590 1447 1611 7203;7204;7205;7206;7207;7208 4837;4838;4839;4840;4841;4842;4843;4844;4845 4844 9 EAACFKARPNTVISQEPFVPK EEELRQQKEAACFKAR SQEPFVPKKEKKSVAE K E A P K K 3 1 1 0 1 1 2 0 0 1 0 2 0 2 3 1 1 0 0 2 0 21 2 2388.226 Q9ULW0;Q96RR5 Q9ULW0 621 641 TPX2;HCA90 Targeting protein for Xklp2 yes no 3;4 4.5824E-74 124.04 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 2 1 1 169230000 87548000 20313000 8373400 26683000 1791400 24520000 1591 1611 1612 7209;7210;7211;7212;7213;7214;7215;7216 4846;4847;4848;4849;4850;4851;4852 4848 7 EAAENSLVAYK FATGNDRKEAAENSLV ENSLVAYKAASDIAMT K E A Y K A 3 0 1 0 0 0 2 0 0 0 1 1 0 0 0 1 0 0 1 1 0 11 0 1193.5928 P62258-2;P62258 P62258-2 121 131 YWHAE 14-3-3 protein epsilon yes no 2 0.013623 60.598 By matching By MS/MS By matching By matching By matching By matching 1 1 2277200 0 1264200 0 0 0 1013000 1592 987 1613 7217;7218 4853 4853 1 EAAEQAERSQSSIVPEEEQAANKGEEK KRQEEREKEAAEQAER AANKGEEKKDDENIPM K E A E K K 5 1 1 0 0 3 8 1 0 1 0 2 0 0 1 3 0 0 0 1 0 27 2 2943.3694 C0IMW5;B4DFR4;Q969G3-2;B4DGM3;Q969G3;H7C048;H7BXG8;H7C3F6 C0IMW5 271 297 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes no 4 0.012868 32.368 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 12690000 2386300 2013200 2529100 1953400 1706800 2101400 1593 85 1614 7219;7220;7221;7222;7223;7224 4854;4855 4854 2 EAAFDDAVEER ________________ FDDAVEERVINEEYKI K E A E R V 3 1 0 2 0 0 3 0 0 0 0 0 0 1 0 0 0 0 0 1 0 11 0 1250.5415 Q09028-3;Q09028;E9PNS2;E9PIC4;E9PNS6 Q09028-3 5 15 RBBP4 Histone-binding protein RBBP4 yes no 2 0.0035879 81.709 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 1 1 1 147230000 4183300 42109000 25396000 1841400 6103500 67599000 1594 1051 1615 7225;7226;7227;7228;7229;7230;7231 4856;4857;4858;4859 4859 4 EAAFDDAVEERVINEEYK ________________ RVINEEYKIWKKNTPF K E A Y K I 3 1 1 2 0 0 5 0 0 1 0 1 0 1 0 0 0 0 1 2 0 18 1 2125.9804 Q09028-3;Q09028;E9PNS2;E9PIC4;E9PNS6 Q09028-3 5 22 RBBP4 Histone-binding protein RBBP4 yes no 2;3 6.6766E-20 95.236 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 237320000 0 146860000 0 0 0 90463000 1595 1051 1616 7232;7233;7234 4860;4861;4862 4860 1 EAAGEGPALYEDPPDQK TAAKKNDKEAAGEGPA YEDPPDQKTSPSGKPA K E A Q K T 3 0 0 2 0 1 3 2 0 0 1 1 0 0 3 0 0 0 1 0 0 17 0 1785.8057 G3V3C7;G3V5Q1;G3V3M6;P27695;G3V5D9;G3V5M0;G3V359;G3V3Y6 G3V3C7 36 52 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 2 0.0042082 48.623 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 9145900 2553200 1763900 823820 2271200 1733800 0 1596 584 1617 7235;7236;7237;7238;7239 4863;4864;4865 4865 3 EAAGPAPSPMR ARWQRKAKEAAGPAPS GPAPSPMRAANRSHSA K E A M R A 3 1 0 0 0 0 1 1 0 0 0 0 1 0 3 1 0 0 0 0 0 11 0 1082.5179 B4E1H5;Q12834 B4E1H5 34 44 CDC20 Cell division cycle protein 20 homolog yes no 2 0.0092847 65.842 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 13547000 0 1748500 1683400 1250200 2288200 6577100 1597 157 1618 7240;7241;7242;7243;7244 4866;4867;4868;4869 4869 4 EAAGSVRTEEVESR LEEGGKGKEAAGSVRT RTEEVESRAYADPCSR K E A S R A 2 2 0 0 0 0 4 1 0 0 0 0 0 0 0 2 1 0 0 2 0 14 1 1518.7274 Q5T3I0;Q5T3I0-3;E9PAV9 Q5T3I0 314 327 GPATCH4 G patch domain-containing protein 4 yes no 3 0.0014211 81.278 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 2 1 1 1 40742000 5038100 4697800 7018400 4031500 8879800 11076000 1598 1191 1619 7245;7246;7247;7248;7249;7250;7251 4870;4871;4872;4873;4874 4873 5 EAAGTMTLSQFQTLHEK TMYKPFGKEAAGTMTL QFQTLHEKDQETASLR K E A E K D 2 0 0 0 0 2 2 1 1 0 2 1 1 1 0 1 3 0 0 0 0 17 0 1890.9146 Q96IZ5-2;Q96IZ5;H0Y6F9;H7BY88;Q96IZ5-3 Q96IZ5-2 62 78 RBM41 RNA-binding protein 41 yes no 3 0.00063247 83.751 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 1599 1398 1620 7252 4875 4875 1 EAALAEVADEK ANHREAGKEAALAEVA LAEVADEKMLSGLTKD K E A E K M 4 0 0 1 0 0 3 0 0 0 1 1 0 0 0 0 0 0 0 1 0 11 0 1144.5612 H7C415;B4E189;E9PHA2;Q15003 H7C415 116 126 NCAPH Condensin complex subunit 2 yes no 2 2.9028E-05 103.21 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 6843900 709690 1327400 1288400 692590 817650 2008100 1600 156 1621 7253;7254;7255;7256;7257;7258 4876;4877;4878 4877 3 EAALSTALSEK LEALLNSKEAALSTAL LSTALSEKRTLEGELH K E A E K R 3 0 0 0 0 0 2 0 0 0 2 1 0 0 0 2 1 0 0 0 0 11 0 1118.5819 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCJ4;Q5TCI8;H0YAB0 P02545 145 155 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.0027179 86.114 By MS/MS By MS/MS By matching By matching By matching By matching 2 1 1 1 17694000 3973400 7071000 1629100 0 0 5020900 1601 783 1622 7259;7260;7261;7262;7263 4879;4880 4879 2 EAALVQQEEEK QRMKAAEKEAALVQQE LVQQEEEKAEQRKRAR K E A E K A 2 0 0 0 0 2 4 0 0 0 1 1 0 0 0 0 0 0 0 1 0 11 0 1272.6198 B7ZKM0;Q15020;F5H0B8;F8VV04;E7EMI4 B7ZKM0 551 561 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 yes no 2 0.0057163 71.153 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1955700 359830 452050 0 0 0 1143800 1602 206 1623 7264;7265;7266 4881 4881 1 EAASFCEMCPSSFCK HQCDICGKEAASFCEM MCPSSFCKQHREGMLF K E A C K Q 2 0 0 0 3 0 2 0 0 0 0 1 1 2 1 3 0 0 0 0 0 15 0 1809.683 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 1901 1915 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 2 0.00034482 85.493 By matching By MS/MS By matching By matching By matching By matching 1 5462000 0 5462000 0 0 0 0 1603 1404 1624 7267 4882 4882 1 EAATLEVERPLPMEVEK ENPEGEEKEAATLEVE PLPMEVEKNSTPSEPG K E A E K N 2 1 0 0 0 0 5 0 0 0 2 1 1 0 2 0 1 0 0 2 0 17 1 1939.9925 P51858;A8K8G0;Q5SZ08;Q5SZ07;B7Z525 P51858 181 197 HDGF Hepatoma-derived growth factor yes no 3 1.0134E-109 137.73 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 2 1 3 334910000 58258000 80158000 137550000 56835000 2108000 0 1604 954 1625;1626 7268;7269;7270;7271;7272;7273;7274;7275 4883;4884;4885;4886;4887;4888 4883 112 6 EAATSELQSIQR SPKLCAEKEAATSELQ SELQSIQRLVSGLEAK K E A Q R L 2 1 0 0 0 2 2 0 0 1 1 0 0 0 0 2 1 0 0 0 0 12 0 1331.6681 O15119-3;C9JIZ8;O15119-2;O15119 O15119-3 572 583 TBX3 T-box transcription factor TBX3 yes no 2 0.020933 73.273 By matching By matching By matching By matching By matching By MS/MS 1 1259800 0 0 0 0 0 1259800 1605 251 1627 7276 4889 4889 0 EACFAVEGPK KCCAADDKEACFAVEG CFAVEGPKLVVSTQTA K E A P K L 2 0 0 0 1 0 2 1 0 0 0 1 0 1 1 0 0 0 0 1 0 10 0 1106.5066 CON__P02769 CON__P02769 588 597 yes yes 2 0.0031849 90.827 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 26442000 0 6465800 2483600 1758100 4708700 11025000 + 1606 294 1628 7277;7278;7279;7280;7281 4890;4891;4892;4893 4891 4 EADDDEEVDDNIPEMPSPK RCPNMAMKEADDDEEV IPEMPSPKKMHQGKKK K E A P K K 1 0 1 5 0 0 4 0 0 1 0 1 1 0 3 1 0 0 0 1 0 19 0 2143.8739 F5GX68 F5GX68 698 716 DNMT1 Cytosine-specific methyltransferase no no 2 0.013029 40.047 By matching By MS/MS By matching By matching By matching By matching 1 2904500 0 2904500 0 0 0 0 1607 487 1629 7282 4894 4894 1 EADLDVATITK HHCLELAKEADLDVAT LDVATITKTVVENIRK K E A T K T 2 0 0 2 0 0 1 0 0 1 1 1 0 0 0 0 2 0 0 1 0 11 0 1174.6081 P57740;B4DZ67 P57740 627 637 NUP107 Nuclear pore complex protein Nup107 yes no 2 0.0073808 68.676 By matching By MS/MS By matching By matching By matching By matching 1 1 3124500 0 729950 0 0 0 2394500 1608 975 1630 7283;7284 4895 4895 1 EADTDVQVCPNYSIPQK KPPKEILKEADTDVQV PNYSIPQKTDSYFNPK K E A Q K T 1 0 1 2 1 2 1 0 0 1 0 1 0 0 2 1 1 0 1 2 0 17 0 1962.8993 Q7Z2T5;Q7Z2T5-2 Q7Z2T5 231 247 TRMT1L TRMT1-like protein yes no 2 1.1719E-240 172.57 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 24495000 6171600 936140 6557600 0 6763400 4066000 1609 1248 1631 7285;7286;7287;7288;7289 4896;4897;4898;4899 4898 4 EAEEEELEIPPQYQAGGSGIHRPVAK HQKLKHQKEAEEEELE GIHRPVAKKAMPGAEY K E A A K K 3 1 0 0 0 2 6 3 1 2 1 1 0 0 3 1 0 0 1 1 0 26 1 2833.3883 Q5JTH9-2;E9PCK7;Q5JTH9;F5H456 Q5JTH9-2 1100 1125 RRP12 RRP12-like protein yes no 3;4 1.6521E-79 114.37 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 1 1 2 110600000 39438000 25037000 0 4759700 8825700 32544000 1610 414 1632 7290;7291;7292;7293;7294;7295;7296;7297 4900;4901;4902;4903;4904;4905;4906;4907;4908 4906 9 EAEEGCPEKESEEGCPK AKESSPEKEAEEGCPE ESEEGCPKRGFEGSCS K E A P K R 1 0 0 0 2 0 7 2 0 0 0 2 0 0 2 1 0 0 0 0 0 17 1 1963.7775 O43719;E9PFP2 O43719 457 473 HTATSF1 HIV Tat-specific factor 1 yes no 3 0.0014444 80.387 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 4287500 0 0 1498000 711690 1084300 993530 1611 720 1633 7298;7299;7300;7301 4909;4910 4910 2 EAEQMGNELER AALQAMEREAEQMGNE QMGNELERLRAALMES R E A E R L 1 1 1 0 0 1 4 1 0 0 1 0 1 0 0 0 0 0 0 0 0 11 0 1304.5667 Q14980-2;Q14980 Q14980-2 973 983 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 0.0019111 89.561 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 2 1 3051300 0 1145100 0 0 162250 1744000 1612 1121 1634 7302;7303;7304;7305 4911;4912;4913 4912 3 EAEQTCRHLTAQVR QQAGLKTKEAEQTCRH RHLTAQVRSLEAQVAH K E A V R S 2 2 0 0 1 2 2 0 1 0 1 0 0 0 0 0 2 0 0 1 0 14 1 1697.8268 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9;H0YH75 Q14980-2 1654 1667 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3;4 0.00048154 87.719 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 2 1 42468000 4195500 6520500 9916300 4580300 9342000 7913200 1613 1121 1635 7306;7307;7308;7309;7310;7311;7312;7313 4914;4915;4916;4917;4918;4919 4915 6 EAERLAHEDAECEK TERAMLEKEAERLAHE HEDAECEKLMELYERL K E A E K L 3 1 0 1 1 0 5 0 1 0 1 1 0 0 0 0 0 0 0 0 0 14 1 1685.7315 Q9UG63;C9JHK9;C9JZV3 Q9UG63 175 188 ABCF2 ATP-binding cassette sub-family F member 2 yes no 3 0.0014211 81.278 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 5246500 834520 703260 770040 616370 1088100 1234200 1614 1589 1636 7314;7315;7316;7317;7318;7319 4920;4921;4922 4921 3 EAEYEESVAK EEEREMEREAEYEESV EYEESVAKEDQPAVPG R E A A K E 2 0 0 0 0 0 4 0 0 0 0 1 0 0 0 1 0 0 1 1 0 10 0 1153.5139 Q9UNX4 Q9UNX4 720 729 WDR3 WD repeat-containing protein 3 yes yes 2 0.0084895 82.417 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1601600 0 661670 135810 0 0 804160 1615 1617 1637 7320;7321;7322 4923 4923 1 EAFATAFSK KSNTEQMREAFATAFS AFATAFSKLKPESSQQ R E A S K L 3 0 0 0 0 0 1 0 0 0 0 1 0 2 0 1 1 0 0 0 0 9 0 970.476 O96006;C9JXP4 O96006 88 96 ZBED1 Zinc finger BED domain-containing protein 1 yes no 2 0.014866 77.192 By matching By matching By matching By matching By matching By MS/MS 1 1 6260300 0 1531300 0 0 0 4729000 1616 778 1638 7323;7324 4924 4924 1 EAFISEEEIAK VLQFTEEKEAFISEEE ISEEEIAKYMKRGKGK K E A A K Y 2 0 0 0 0 0 4 0 0 2 0 1 0 1 0 1 0 0 0 0 0 11 0 1264.6187 Q96JM3 Q96JM3 690 700 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 3.7715E-05 102.05 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 23097000 0 4296900 11081000 1546900 2578600 3594100 1617 1399 1639 7325;7326;7327;7328;7329 4925;4926;4927;4928;4929 4926 5 EAFQLFDRTGDGK EDQTAEFKEAFQLFDR FDRTGDGKILYSQCGD K E A G K I 1 1 0 2 0 1 1 2 0 0 1 1 0 2 0 0 1 0 0 0 0 13 1 1482.7103 F8W1R7;P60660-2;P60660;G3V1V0;F8VZV5;G8JLA2;B7Z6Z4 F8W1R7 14 26 MYL6 Myosin light polypeptide 6 yes no 3 0.0045635 62.088 By matching By MS/MS By matching By matching By matching By matching 1 3566600 0 3566600 0 0 0 0 1618 552 1640 7330 4930 4930 1 EAFVTSAYK EKGEFDDKEAFVTSAY AFVTSAYKKKLQERAE K E A Y K K 2 0 0 0 0 0 1 0 0 0 0 1 0 1 0 1 1 0 1 1 0 9 0 1014.5022 F5H727;Q9H0G5;H7BYM1 F5H727 72 80 NSRP1 Nuclear speckle splicing regulatory protein 1 yes no 2 0.032422 63.426 By matching By matching By matching By matching By matching By MS/MS 1 1 1720000 0 0 0 0 711130 1008900 1619 526 1641 7331;7332 4931 4931 1 EAFVTSAYKK EKGEFDDKEAFVTSAY FVTSAYKKKLQERAEE K E A K K K 2 0 0 0 0 0 1 0 0 0 0 2 0 1 0 1 1 0 1 1 0 10 1 1142.5972 F5H727;Q9H0G5;H7BYM1 F5H727 72 81 NSRP1 Nuclear speckle splicing regulatory protein 1 yes no 2 0.013276 99.788 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 6573600 0 0 0 0 3044400 3529200 1620 526 1642 7333;7334 4932;4933 4932 2 EAGAGGLAIAVEGPSK AEFSIWTREAGAGGLA IAVEGPSKAEISFEDR R E A S K A 4 0 0 0 0 0 2 4 0 1 1 1 0 0 1 1 0 0 0 1 0 16 0 1425.7464 Q5HY54;P21333-2;P21333;E9PHF0;H0Y5C6 Q5HY54 2225 2240 FLNA Filamin-A yes no 2 0.014706 42.708 By matching By MS/MS By matching By matching By matching By matching 1 1 1724500 0 925460 0 0 0 798990 1621 860 1643 7335;7336 4934 4934 1 EAGDVCYADVQK QDLKDHMREAGDVCYA VCYADVQKDGVGMVEY R E A Q K D 2 0 0 2 1 1 1 1 0 0 0 1 0 0 0 0 0 0 1 2 0 12 0 1353.5871 H0YIB4;Q13242 H0YIB4 78 89 SRSF9 Serine/arginine-rich splicing factor 9 yes no 2 0.0018172 81.676 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 4934000 0 906120 775620 415780 939900 1896500 1622 623 1644 7337;7338;7339;7340;7341 4935;4936;4937;4938 4935 4 EAGEGGEAEAPAAEGGK FSFKKNKKEAGEGGEA APAAEGGKDEAAGGAA K E A G K D 5 0 0 0 0 0 5 5 0 0 0 1 0 0 1 0 0 0 0 0 0 17 0 1528.6641 P29966 P29966 177 193 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 0.0003962 71.781 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2727500 0 538540 739800 190970 429570 828630 1623 886 1645 7342;7343;7344;7345;7346 4939;4940;4941;4942 4942 4 EAGTDNRNIVDDGK EEPTAETKEAGTDNRN RNIVDDGKSQKLTQDD K E A G K S 1 1 2 3 0 0 1 2 0 1 0 1 0 0 0 0 1 0 0 1 0 14 1 1502.6961 Q9UJA5;Q9UJA5-3;Q9UJA5-2 Q9UJA5 89 102 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes no 3 0.0018381 67.118 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 5226200 640260 688470 1161000 545720 918110 1272600 1624 1597 1646 7347;7348;7349;7350;7351;7352 4943;4944 4944 2 EAHEPLAVADAK KVLKKIVKEAHEPLAV PLAVADAKLGGVIKEK K E A A K L 4 0 0 1 0 0 2 0 1 0 1 1 0 0 1 0 0 0 0 1 0 12 0 1249.6303 Q9Y2X3 Q9Y2X3 82 93 NOP58 Nucleolar protein 58 yes yes 2;3 1.5595E-18 117.09 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 1 1 2 2 79178000 18691000 5561000 5672200 7328200 23892000 18034000 1625 1640 1647 7353;7354;7355;7356;7357;7358;7359;7360;7361;7362;7363;7364 4945;4946;4947;4948;4949;4950;4951;4952;4953;4954 4952 10 EAHLPVIENK TFGEGLLKEAHLPVIE HLPVIENKVCNRNEYL K E A N K V 1 0 1 0 0 0 2 0 1 1 1 1 0 0 1 0 0 0 0 1 0 10 0 1148.619 CON__P06868 CON__P06868 720 729 yes yes 2 0.027035 58.592 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2563800 0 0 300290 0 697050 1566400 + 1626 295 1648 7365;7366;7367 4955 4955 1 EAHLPVIENKVCNRNEYLDGR TFGEGLLKEAHLPVIE RNEYLDGRVKPTELCA K E A G R V 1 2 3 1 1 0 3 1 1 1 2 1 0 0 1 0 0 0 1 2 0 21 2 2525.2445 CON__P06868 CON__P06868 720 740 yes yes 4 2.5943E-05 60.542 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 12341000 0 0 6308600 0 6032100 0 + 1627 295 1649 7368;7369 4956;4957 4957 2 EAHLTPYSLQAIK AFTRAYNKEAHLTPYS PYSLQAIKASRHSTSP K E A I K A 2 0 0 0 0 1 1 0 1 1 2 1 0 0 1 1 1 0 1 0 0 13 0 1469.7878 P35251-2;P35251;H0Y9P8 P35251-2 1068 1080 RFC1 Replication factor C subunit 1 yes no 3 0 190.78 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 1 1 1 1 95634000 19032000 35115000 10630000 6910400 5874000 18071000 1628 896 1650 7370;7371;7372;7373;7374;7375;7376 4958;4959;4960;4961;4962;4963 4959 5 EAIEGTYIDK GLGFKTPKEAIEGTYI IEGTYIDKKCPFTGNV K E A D K K 1 0 0 1 0 0 2 1 0 2 0 1 0 0 0 0 1 0 1 0 0 10 0 1137.5554 P62280 P62280 49 58 RPS11 40S ribosomal protein S11 yes yes 2 1.8455E-15 123.11 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 64734000 11173000 6296500 6704800 5881800 19806000 14871000 1629 989 1651 7377;7378;7379;7380;7381;7382;7383 4964;4965;4966;4967;4968 4968 5 EAKPSATGKVIDK QAKMPMKKEAKPSATG ATGKVIDKKLPKPLEK K E A D K K 2 0 0 1 0 0 1 1 0 1 0 3 0 0 1 1 1 0 0 1 0 13 2 1342.7456 E9PC90;P14635;Q5TZP9;D6RHI0 E9PC90 65 77 CCNB1 G2/mitotic-specific cyclin-B1 yes no 3 0.018979 59.75 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 12581000 984790 3063200 7391100 728400 0 413060 1630 413 1652 7384;7385;7386;7387;7388 4969;4970 4969 2 EALCDPTVASR SGHKYSLKEALCDPTV CDPTVASRLSDTKAAG K E A S R L 2 1 0 1 1 0 1 0 0 0 1 0 0 0 1 1 1 0 0 1 0 11 0 1217.571 Q9BRX2 Q9BRX2 255 265 PELO Protein pelota homolog yes yes 2 0.010566 64.224 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 22072000 0 4958600 2894300 0 0 14220000 1631 1443 1653 7389;7390;7391 4971;4972 4972 2 EALCDPTVASRLSDTK SGHKYSLKEALCDPTV ASRLSDTKAAGEVKAL K E A T K A 2 1 0 2 1 0 1 0 0 0 2 1 0 0 1 2 2 0 0 1 0 16 1 1761.8567 Q9BRX2 Q9BRX2 255 270 PELO Protein pelota homolog yes yes 2;3 8.4343E-18 104.16 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 2 3 68295000 8871700 12807000 10700000 1652100 13408000 20856000 1632 1443 1654 7392;7393;7394;7395;7396;7397;7398;7399;7400;7401 4973;4974;4975;4976;4977;4978 4974 5 EALERLLPQVEAARK RKHQRQLKEALERLLP PQVEAARKAIRAAQVE K E A R K A 3 2 0 0 0 1 3 0 0 0 3 1 0 0 1 0 0 0 0 1 0 15 2 1721.9788 Q86UT8;E9PJ16;E9PPT8 Q86UT8 32 46 CCDC84 Coiled-coil domain-containing protein 84 yes no 3 3.4452E-295 185.2 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 239010000 0 180140000 29755000 0 0 29118000 1633 1263 1655 7402;7403;7404 4979;4980;4981 4981 2 EALICPTCNVTIHNR CNKSITAKEALICPTC CNVTIHNRCKDTLANC K E A N R C 1 1 2 0 2 0 1 0 1 2 1 0 0 0 1 0 2 0 0 1 0 15 0 1796.8662 F5H3H5;B7Z977;Q92974-3;Q92974-2;Q92974;Q5VY93 F5H3H5 37 51 ARHGEF2 Rho guanine nucleotide exchange factor 2 yes no 3 0.0020279 65.956 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 6587200 1789500 806240 0 1277900 2713500 0 1634 198 1656 7405;7406;7407;7408 4982;4983;4984 4984 3 EALNVINTHTK LIQNGSFKEALNVINT NVINTHTKVLANNSLS K E A T K V 1 0 2 0 0 0 1 0 1 1 1 1 0 0 0 0 2 0 0 1 0 11 0 1238.6619 G5E9Z8;H0YH39;O76094 G5E9Z8 63 73 SRP72 Signal recognition particle subunit SRP72 yes no 2;3 0.020772 69.815 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2 2 2 4266700 311850 321400 0 608850 1491300 1533300 1635 600 1657 7409;7410;7411;7412;7413;7414;7415;7416 4985;4986;4987 4986 2 EALQDVEDENQ GDGEEQNKEALQDVED QDVEDENQ________ K E A N Q - 1 0 1 2 0 2 3 0 0 0 1 0 0 0 0 0 0 0 0 1 0 11 0 1288.5419 P62258-2;P62258;I3L0W5 P62258-2 223 233 YWHAE 14-3-3 protein epsilon yes no 2 0.013912 60.255 By matching By MS/MS By matching By matching By matching By matching 1 1 1679600 319790 1359800 0 0 0 0 1636 987 1658 7417;7418 4988 4988 1 EALRGAVLNGGPPSTR EPGEAKEREALRGAVL NGGPPSTRITPEFSKW R E A T R I 2 2 1 0 0 0 1 3 0 0 2 0 0 0 2 1 1 0 0 1 0 16 1 1593.8587 Q5TDE7;Q5TDE8;B4DLZ9;Q5VTB9;F8WB55 Q5TDE7 145 160 RNF220 E3 ubiquitin-protein ligase RNF220 yes no 3 0.036051 37.687 By matching By matching By matching By matching By matching By MS/MS 1 1 1786500 0 0 591410 0 0 1195100 1637 101 1659 7419;7420 4989 4989 1 EAMVQAEEAAAEITRK RKNLDVMKEAMVQAEE AAAEITRKLEKQEKKR K E A R K L 5 1 0 0 0 1 4 0 0 1 0 1 1 0 0 0 1 0 0 1 0 16 1 1745.8618 O00567;H0YDU4;H0Y653;E9PDI8 O00567 423 438 NOP56 Nucleolar protein 56 yes no 2;3 2.6819E-164 158.93 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 2 2 190350000 75781000 1360500 311110 59549000 6889000 46462000 1638 692 1660;1661 7421;7422;7423;7424;7425;7426;7427;7428;7429;7430;7431;7432;7433 4990;4991;4992;4993;4994;4995;4996 4992 69 7 EANDSDVQPSGAQRAEAFVR IYHALSQKEANDSDVQ QRAEAFVRAFLKRSTP K E A V R A 4 2 1 2 0 2 2 1 0 0 0 0 0 1 1 2 0 0 0 2 0 20 1 2146.0039 O95707 O95707 13 32 POP4 Ribonuclease P protein subunit p29 yes yes 3 0.0020738 50.722 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 10787000 2427300 0 1927700 1494300 1332100 3605800 1639 773 1662 7434;7435;7436;7437;7438 4997;4998;4999 4998 3 EANEILQR APAGITLKEANEILQR EANEILQRSKKGKLPI K E A Q R S 1 1 1 0 0 1 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 8 0 971.50361 H0Y4R1;P12268;E7ETK5;C9K0R9;F5H247;P20839-2;P20839-4;C9J381;P20839;E7EQS0;P20839-3;C9JV30 H0Y4R1 128 135 IMPDH2;IMPDH1 Inosine-5-monophosphate dehydrogenase 2;Inosine-5-monophosphate dehydrogenase 1;Inosine-5-monophosphate dehydrogenase yes no 2 0.018279 81.296 By matching By matching By matching By matching By MS/MS By matching 1 1625300 0 0 0 0 1625300 0 1640 610 1663 7439 5000 5000 1 EAPAMGSEEGMR LAPNGREREAPAMGSE MGSEEGMRAVSTGDCG R E A M R A 2 1 0 0 0 0 3 2 0 0 0 0 2 0 1 1 0 0 0 0 0 12 0 1263.5224 Q6PJG2;F6RU81;H7C1L3 Q6PJG2 424 435 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 2 0.032076 46.88 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 2314700 0 408830 0 360780 707950 837150 1641 1231 1664 7440;7441;7442;7443 5001 5001 1 EAPAPVAHPAPGGPEEQWQR AAPITVSKEAPAPVAH GPEEQWQRAIHERGEA K E A Q R A 4 1 0 0 0 2 3 2 1 0 0 0 0 0 5 0 0 1 0 1 0 20 0 2123.0185 Q96KM6 Q96KM6 483 502 ZNF512B Zinc finger protein 512B yes yes 3 0.037296 32.121 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 37563000 0 9651000 10222000 4857200 11463000 1369800 1642 1402 1665 7444;7445;7446;7447;7448 5002 5002 1 EAPATQASSTTQLTDTQVLAAENK VSKTPEAREAPATQAS QVLAAENKSLAADTKK R E A N K S 5 0 1 1 0 3 2 0 0 0 2 1 0 0 1 2 5 0 0 1 0 24 0 2474.2136 Q9UNF1;Q9UNF1-2;H7BXW3;Q5H909 Q9UNF1 77 100 MAGED2 Melanoma-associated antigen D2 yes no 2;3 5.7445E-11 81.65 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 10055000 0 2060900 0 0 0 7994000 1643 1614 1666 7449;7450 5003;5004 5003 2 EAPSPTCPDLGAK LQYQGGHKEAPSPTCP TCPDLGAKSHPPDKWA K E A A K S 2 0 0 1 1 0 1 1 0 0 1 1 0 0 3 1 1 0 0 0 0 13 0 1341.6235 O00257 O00257 179 191 CBX4 E3 SUMO-protein ligase CBX4 yes yes 2 0.025469 46.206 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 10011000 0 0 966620 866340 3756300 4422000 1644 687 1667 7451;7452;7453;7454 5005 5005 1 EAQELSQNSAIK IIFCETKKEAQELSQN LSQNSAIKQDAQSLHG K E A I K Q 2 0 1 0 0 2 2 0 0 1 1 1 0 0 0 2 0 0 0 0 0 12 0 1316.6572 Q9NR30;Q9NR30-2 Q9NR30 450 461 DDX21 Nucleolar RNA helicase 2 yes no 2 0 209.19 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 14352000 1669900 1412300 1053600 995480 5756000 3465200 1645 1534 1668 7455;7456;7457;7458;7459;7460 5006;5007;5008;5009;5010;5011;5012;5013 5008 8 EAQSEKEEAPKPLHK LSASPQLKEAQSEKEE EAPKPLHKVVVCVSKK K E A H K V 2 0 0 0 0 1 4 0 1 0 1 3 0 0 2 1 0 0 0 0 0 15 2 1719.8792 Q92547 Q92547 893 907 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 3 0.0017823 73.219 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 3916000 0 0 1682300 526560 545240 1161900 1646 1351 1669 7461;7462;7463;7464 5014 5014 1 EAQTEGRTVPAAVTDLR VSGGLFSKEAQTEGRT PAAVTDLRITENSTRH K E A L R I 3 2 0 1 0 1 2 1 0 0 1 0 0 0 1 0 3 0 0 2 0 17 1 1812.933 Q6ZR19;F8VSD5;P23467-2;P23467;F8VU56;P23467-3 Q6ZR19 1173 1189 PTPRB Receptor-type tyrosine-protein phosphatase beta yes no 3 0.0039058 49.595 By MS/MS By matching By matching By matching By matching By matching 1 9912500 9912500 0 0 0 0 0 1647 538 1670 7465 5015 5015 1 EARDVGDTCSVGK DPWFCEAREARDVGDT GDTCSVGKKDEEQAAL R E A G K K 1 1 0 2 1 0 1 2 0 0 0 1 0 0 0 1 1 0 0 2 0 13 1 1392.6303 Q1ED39;H3BPL4 Q1ED39 176 188 KNOP1 Lysine-rich nucleolar protein 1 yes no 3 0.019064 49.356 By matching By matching By MS/MS By matching By matching By matching 1 1 2178400 0 0 1825200 0 353220 0 1648 1157 1671 7466;7467 5016 5016 1 EARNVTMETE LMRLMVAKEARNVTME RNVTMETE________ K E A T E - 1 1 1 0 0 0 3 0 0 0 0 0 1 0 0 0 2 0 0 1 0 10 1 1178.5238 P49458 P49458 77 86 SRP9 Signal recognition particle 9 kDa protein yes yes 2 0.020442 83.869 By matching By matching By matching By matching By matching By MS/MS 1 1 1 8415600 2745000 0 0 3087500 0 2583200 1649 937 1672 7468;7469;7470 5017 5017 1 EARQNVAEVESSK KAAVQAFKEARQNVAE VAEVESSKNASEDNHS K E A S K N 2 1 1 0 0 1 3 0 0 0 0 1 0 0 0 2 0 0 0 2 0 13 1 1445.711 Q8NEF9 Q8NEF9 125 137 SRFBP1 Serum response factor-binding protein 1 yes yes 3 0.00075492 92.151 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 4767800 1386800 0 1509900 735580 1135600 0 1650 1322 1673 7471;7472;7473;7474 5018;5019;5020 5018 3 EASDPQPEEADGGLK FKFDHLRKEASDPQPE EEADGGLKSWRESCDS K E A L K S 2 0 0 2 0 1 3 2 0 0 1 1 0 0 2 1 0 0 0 0 0 15 0 1541.6845 P52907 P52907 104 118 CAPZA1 F-actin-capping protein subunit alpha-1 yes yes 2 0.0053654 52.599 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 6635500 426740 2089800 839270 1014500 733540 1531700 1651 961 1674 7475;7476;7477;7478;7479;7480 5021;5022;5023 5023 3 EASGETTGVDITK SSIRTEAKEASGETTG TTGVDITKIQVKRCET K E A T K I 1 0 0 1 0 0 2 2 0 1 0 1 0 0 0 1 3 0 0 1 0 13 0 1306.6252 B4DLG2;O75152;E9PQ61 B4DLG2 487 499 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 0.00015326 94.673 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 27525000 4446900 2643800 2490000 2703100 7217800 8023700 1652 97 1675 7481;7482;7483;7484;7485;7486;7487 5024;5025;5026;5027;5028;5029;5030 5024 7 EASGETTGVDITKIQVK SSIRTEAKEASGETTG DITKIQVKRCETMREK K E A V K R 1 0 0 1 0 1 2 2 0 2 0 2 0 0 0 1 3 0 0 2 0 17 1 1774.9313 B4DLG2;O75152;E9PQ61 B4DLG2 487 503 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2;3 8.478E-58 122.5 By MS/MS By matching By matching By MS/MS By matching By MS/MS 2 1 1 1 63671000 52348000 3061700 0 5440900 0 2821000 1653 97 1676 7488;7489;7490;7491;7492 5031;5032;5033;5034 5033 2 EASGETTGVDITKIQVKR SSIRTEAKEASGETTG ITKIQVKRCETMREKH K E A K R C 1 1 0 1 0 1 2 2 0 2 0 2 0 0 0 1 3 0 0 2 0 18 2 1931.0324 B4DLG2;O75152;E9PQ61 B4DLG2 487 504 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 4 0.026676 35.771 By MS/MS By matching By matching By matching By matching By matching 1 1167600 1167600 0 0 0 0 0 1654 97 1677 7493 5035 5035 1 EASHKQIMENAEINNIIK RGKILNVREASHKQIM AEINNIIKIVGLQYKK R E A I K I 2 0 3 0 0 1 3 0 1 4 0 2 1 0 0 1 0 0 0 0 0 18 1 2081.0575 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5;Q02880-2;Q02880;E9PCY5 Q02880-2 511 528 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta;DNA topoisomerase 2 no no 3 1.8404E-05 88.283 By matching By matching By matching By matching By matching By MS/MS 1 29045000 0 0 0 0 0 29045000 1655 1035;655 1678 7494 5036 5036 1 EATAQKPTGSVGSTVTTPPPLVR LRQSQIQKEATAQKPT TTPPPLVRGTQNIPAG K E A V R G 2 1 0 0 0 1 1 2 0 0 1 1 0 0 4 2 5 0 0 3 0 23 1 2293.2278 Q86YP4;B5MC40;Q86YP4-2 Q86YP4 173 195 GATAD2A Transcriptional repressor p66-alpha yes no 3 1.1478E-172 143.72 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 47210000 0 5994600 28676000 0 538220 12001000 1656 170 1679 7495;7496;7497;7498 5037;5038 5037 2 EATDAIGHLDR GIYDPCEKEATDAIGH DAIGHLDRQQREDITQ K E A D R Q 2 1 0 2 0 0 1 1 1 1 1 0 0 0 0 0 1 0 0 0 0 11 0 1196.5786 Q12906-5;Q12906-4;Q12906-2;Q12906-6;Q12906-3;C9JFV5;Q12906;G5E9M5 Q12906-5 298 308 ILF3 Interleukin enhancer-binding factor 3 yes no 2 0.017377 57.567 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2452100 0 851010 0 0 368740 1232400 1657 243 1680 7499;7500;7501 5039;5040 5040 2 EATHSSGFSGSSASVASTSSIK CPNPEDSREATHSSGF VASTSSIKCLQIPEKL R E A I K C 3 0 0 0 0 0 1 2 1 1 0 1 0 1 0 9 2 0 0 1 0 22 0 2083.9658 O60566-2;C9JLW5;O60566;O60566-3 O60566-2 561 582 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes no 3 0.018337 34.649 By matching By matching By MS/MS By matching By matching By matching 1 583160 0 0 583160 0 0 0 1658 259 1681 7502 5041 5041 1 EATPRGGGDGGGGGRSFSQPEAGGSHHK AEEGENRREATPRGGG EAGGSHHKVSVSPVVH R E A H K V 2 2 0 1 0 1 2 10 2 0 0 1 0 1 2 3 1 0 0 0 0 28 2 2649.2029 Q8WVV9-4;C9J9G0;Q8WVV9;Q5JB52;B7WPG3;Q8WVV9-3;Q8WVV9-2;C9IYN3 Q8WVV9-4 39 66 HNRNPLL;HNRPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 4;5 0.0010024 39.215 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 2 2 2 22183000 0 4975800 5569800 2961500 3449700 5225900 1659 236 1682 7503;7504;7505;7506;7507;7508;7509;7510;7511;7512 5042;5043 5042 2 EATQILSVPK CKYPVSSREATQILSV TQILSVPKVDDEILGF R E A P K V 1 0 0 0 0 1 1 0 0 1 1 1 0 0 1 1 1 0 0 1 0 10 0 1084.6128 P42166 P42166 526 535 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 0.0031028 91.961 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 67558000 3611800 20873000 7002600 4809200 18093000 13169000 1660 913 1683 7513;7514;7515;7516;7517;7518 5044;5045;5046;5047 5047 4 EATTNAPFRLNK NWKDKFMKEATTNAPF NAPFRLNKKDRKTVKM K E A N K K 2 1 2 0 0 0 1 0 0 0 1 1 0 1 1 0 2 0 0 0 0 12 1 1360.7099 B4E3A8;P30740;B4DNT0 B4E3A8 140 151 SERPINB1 Leukocyte elastase inhibitor yes no 3 0.0018972 84.31 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 17721000 3694900 242930 4476900 3600300 1684400 4021100 1661 166 1684 7519;7520;7521;7522;7523;7524;7525 5048;5049;5050;5051 5049 4 EAVATIMSGSK LQIPEEEREAVATIMS ATIMSGSKAKVRKALQ R E A S K A 2 0 0 0 0 0 1 1 0 1 0 1 1 0 0 2 1 0 0 1 0 11 0 1092.5485 H9KV59;O43663;O43663-2 H9KV59 258 268 PRC1 Protein regulator of cytokinesis 1 no no 2 0.0013333 92.112 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 3706100 350000 1256000 0 0 0 2100100 1662 676 1685 7526;7527;7528 5052;5053 5052 2 EAVATIMSGSKAK LQIPEEEREAVATIMS IMSGSKAKVRKALQLE R E A A K V 3 0 0 0 0 0 1 1 0 1 0 2 1 0 0 2 1 0 0 1 0 13 1 1291.6806 H9KV59;O43663;O43663-2 H9KV59 258 270 PRC1 Protein regulator of cytokinesis 1 no no 2;3 0.005016 72.891 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 2 6230700 303380 3221900 0 0 0 2705500 1663 676 1686 7529;7530;7531;7532;7533 5054;5055;5056 5054 3 EAVGGQAEDHLKLK KKSKDMAKEAVGGQAE AEDHLKLKDGQQQNET K E A L K D 2 0 0 1 0 1 2 2 1 0 2 2 0 0 0 0 0 0 0 1 0 14 1 1493.7838 Q8IWC1-2;Q8IWC1;H7BY77;Q8IWC1-3 Q8IWC1-2 599 612 MAP7D3 MAP7 domain-containing protein 3 yes no 3 0.0012463 70.628 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 8693300 1691800 1282700 1233900 435840 1430800 2618300 1664 1280 1687 7534;7535;7536;7537;7538;7539 5057;5058;5059 5058 3 EAVLKDHTKIR EELPVENREAVLKDHT LKDHTKIRALVRAHSE R E A I R A 1 1 0 1 0 0 1 0 1 1 1 2 0 0 0 0 1 0 0 1 0 11 2 1308.7514 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7;Q14676-4 Q14676 468 478 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3 0.037179 62.633 By matching By MS/MS By matching By matching By matching By matching 1 1 1094200 0 455480 638760 0 0 0 1665 1109 1688 7540;7541 5060 5060 1 EAVSSSHGPSDPTDR KGVLRPQKEAVSSSHG GPSDPTDRAEVEKDSG K E A D R A 1 1 0 2 0 0 1 1 1 0 0 0 0 0 2 4 1 0 0 1 0 15 0 1540.6754 P54278;P54278-3;C9J167;I3L0B5 P54278 473 487 PMS2 Mismatch repair endonuclease PMS2 yes no 3 0.0069763 48.527 By matching By matching By matching By matching By matching By MS/MS 1 1 1 928350 0 283010 166120 0 0 479220 1666 966 1689 7542;7543;7544 5061 5061 1 EAVSSSHGPSDPTDRAEVEK KGVLRPQKEAVSSSHG TDRAEVEKDSGHGSTS K E A E K D 2 1 0 2 0 0 3 1 1 0 0 1 0 0 2 4 1 0 0 2 0 20 1 2096.9611 P54278;P54278-3;C9J167;I3L0B5 P54278 473 492 PMS2 Mismatch repair endonuclease PMS2 yes no 3;4 0.0016909 51.76 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 2 2 2 1 2 14175000 843230 2928400 3584400 2710300 1470600 2638500 1667 966 1690 7545;7546;7547;7548;7549;7550;7551;7552;7553;7554 5062;5063;5064;5065;5066 5064 5 EAYPDHTQFEK AGLMKIVKEAYPDHTQ PDHTQFEKNNPHYDPS K E A E K N 1 0 0 1 0 1 2 0 1 0 0 1 0 1 1 0 1 0 1 0 0 11 0 1363.6044 Q9P016;Q9P016-2 Q9P016 132 142 THYN1 Thymocyte nuclear protein 1 yes no 2;3 0.0062284 68.536 By MS/MS By matching By matching By matching By MS/MS By MS/MS 2 2 2 1 1 2 15018000 1800900 3899400 2306700 1061000 2043000 3907400 1668 1570 1691 7555;7556;7557;7558;7559;7560;7561;7562;7563;7564 5067;5068;5069 5069 3 EAYSGCSGPVDSECPPPPSSPVHK EQWLKVIKEAYSGCSG PPSSPVHKAELEKKLS K E A H K A 1 0 0 1 2 0 2 2 1 0 0 1 0 0 6 5 0 0 1 2 0 24 0 2540.0948 Q8N556;E9PDT7 Q8N556 246 269 AFAP1 Actin filament-associated protein 1 yes no 3 0.0070986 44.963 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 13774000 0 0 2659100 2920700 8194600 0 1669 423 1692 7565;7566;7567;7568 5070;5071;5072 5071 3 ECCDKPLLEK DTISSKLKECCDKPLL CDKPLLEKSHCIAEVE K E C E K S 0 0 0 1 2 0 2 0 0 0 2 2 0 0 1 0 0 0 0 0 0 10 1 1290.5948 CON__P02769 CON__P02769 300 309 yes yes 2;3 4.906E-115 161.51 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 2 2 1 2 1 2 171580000 30205000 41784000 12853000 18695000 14307000 53739000 + 1670 294 1693 7569;7570;7571;7572;7573;7574;7575;7576;7577;7578 5073;5074;5075;5076;5077 5077 5 ECCHGDLLECADDR TDLTKVHKECCHGDLL LLECADDRADLAKYIC K E C D R A 1 1 0 3 3 0 2 1 1 0 2 0 0 0 0 0 0 0 0 0 0 14 0 1748.6553 CON__P02769 CON__P02769 267 280 yes yes 3 0.00092167 75.483 By matching By MS/MS By matching By matching By matching By matching 1 1 1 3007000 0 1548800 0 0 1066800 391390 + 1671 294 1694 7579;7580;7581 5078 5078 1 ECCHGDLLECADDRADLAK TDLTKVHKECCHGDLL DDRADLAKYICDNQDT K E C A K Y 3 1 0 4 3 0 2 1 1 0 3 1 0 0 0 0 0 0 0 0 0 19 1 2246.9355 CON__P02769 CON__P02769 267 285 yes yes 2;3;4 2.7768E-51 116 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 1 1 2 3 3 281670000 33841000 25194000 12032000 14967000 25127000 170510000 + 1672 294 1695 7582;7583;7584;7585;7586;7587;7588;7589;7590;7591;7592;7593 5079;5080;5081;5082;5083;5084;5085;5086 5080 8 ECGQLLISENQK FCKSNRDKECGQLLIS LLISENQKVAAHHKCM K E C Q K V 0 0 1 0 1 2 2 1 0 1 2 1 0 0 0 1 0 0 0 0 0 12 0 1417.6871 B4E0G4;Q8IWS0;E9PC97;Q5JRC6;Q8IWS0-2 B4E0G4 27 38 PHF6 PHD finger protein 6 yes no 2 0.0019734 88.101 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 10661000 1021800 3713400 1308500 1007500 0 3609300 1673 152 1696 7594;7595;7596;7597;7598 5087;5088;5089;5090 5089 4 ECIIVWEKKPTVEEK ENTADNEKECIIVWEK KKPTVEEKAKADTLKL K E C E K A 0 0 0 0 1 0 4 0 0 2 0 3 0 0 1 0 1 1 0 2 0 15 2 1886.9812 P49792;E9PGT0 P49792 2709 2723 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 3;4 1.1792E-69 131.66 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 2 2 2 1 31531000 6247200 1735200 7988200 2215200 10252000 3093000 1674 945 1697 7599;7600;7601;7602;7603;7604;7605;7606;7607;7608 5091;5092;5093;5094;5095;5096 5094 6 ECLAETERNART IHARALVRECLAETER ETERNART________ R E C R T - 2 2 1 0 1 0 3 0 0 0 1 0 0 0 0 0 2 0 0 0 0 12 2 1448.6678 O75956 O75956 115 126 CDK2AP2 Cyclin-dependent kinase 2-associated protein 2 yes yes 3 0.02626 60.598 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 11704000 0 1269200 4048900 490160 601250 5294400 1675 752 1698 7609;7610;7611;7612;7613 5097 5097 1 ECPEIGPFAGRGQK EKEEKHGKECPEIGPF PFAGRGQKESTLHLIN K E C Q K E 1 1 0 0 1 1 2 3 0 1 0 1 0 1 2 0 0 0 0 0 0 14 1 1544.7406 Q8NFC6 Q8NFC6 2437 2450 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 3 0.0012335 84.605 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 2849800 0 2273400 576410 0 0 0 1676 1325 1699 7614;7615 5098;5099;5100 5100 2 ECPFFIKGNQK YGHRTGDKECPFFIKG FFIKGNQKLEQFRVAH K E C Q K L 0 0 1 0 1 1 1 1 0 1 0 2 0 2 1 0 0 0 0 0 0 11 1 1366.6704 Q8TA86;C9J6V2 Q8TA86 119 129 RP9 Retinitis pigmentosa 9 protein yes no 3 0.0096136 65.627 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 9846000 1359800 1555500 631850 1438700 4860100 0 1677 1333 1700 7616;7617;7618;7619;7620 5101;5102 5102 2 ECTIEATA GESGHLARECTIEATA ECTIEATA________ R E C T A - 2 0 0 0 1 0 2 0 0 1 0 0 0 0 0 0 2 0 0 0 0 8 0 893.38005 B4DP17;P62633-3;P62633-2;P62633;P62633-5;E9PDR7;P62633-4 B4DP17 153 160 CNBP Cellular nucleic acid-binding protein no no 1 0.0082194 68.915 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 3511900 0 903770 1493300 0 243550 871250 1678 112;992 1701 7621;7622;7623;7624 5103;5104 5103 2 ECVLPGGETAGDMGK LLIQIGPKECVLPGGE ETAGDMGKLRQIIQRG K E C G K L 1 0 0 1 1 0 2 4 0 0 1 1 1 0 1 0 1 0 0 1 0 15 0 1519.6647 B4E2Z2;P43246;E9PHA6;E7EU21;E7EQQ1 B4E2Z2 132 146 MSH2 DNA mismatch repair protein Msh2 yes no 2 0.00061075 73.802 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 12848000 0 3456400 1564100 0 804760 7023000 1679 162 1702 7625;7626;7627;7628 5105;5106;5107;5108;5109 5106 5 ECVNCGATATPLWRR ARSCSEGRECVNCGAT TATPLWRRDGTGHYLC R E C R R D 2 2 1 0 2 0 1 1 0 0 1 0 0 0 1 0 2 1 0 1 0 15 1 1789.8352 P23769;P23769-2;P15976-3;B7WNQ9;P15976-2;P15976 P23769 294 308 GATA2;GATA1 Endothelial transcription factor GATA-2;Erythroid transcription factor yes no 3 0.019612 38.3 By matching By matching By matching By matching By matching By MS/MS 1 1261700 0 0 0 0 0 1261700 1680 869 1703 7629 5110 5110 1 EDAAGTSGLGELNSR GTTKGNEKEDAAGTSG GLGELNSREQTNQSLR K E D S R E 2 1 1 1 0 0 2 3 0 0 2 0 0 0 0 2 1 0 0 0 0 15 0 1475.6852 Q5T3I0;Q5T3I0-3;E9PAV9;F8W895 Q5T3I0 266 280 GPATCH4 G patch domain-containing protein 4 yes no 2 2.9331E-13 101.42 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 14942000 0 3223100 1198300 877590 2172500 7471000 1681 1191 1704 7630;7631;7632;7633;7634 5111;5112;5113;5114;5115;5116 5116 5 EDAAGTSGLGELNSREQTNQSLRK GTTKGNEKEDAAGTSG QTNQSLRKGKKKKRWH K E D R K G 2 2 2 1 0 2 3 3 0 0 3 1 0 0 0 3 2 0 0 0 0 24 2 2560.2477 Q5T3I0;Q5T3I0-3;E9PAV9;F8W895 Q5T3I0 266 289 GPATCH4 G patch domain-containing protein 4 yes no 4 0.028768 31.488 By matching By matching By matching By matching By MS/MS By matching 1 1 5088700 0 0 0 0 2614500 2474100 1682 1191 1705 7635;7636 5117 5117 1 EDAEAPGIRDHESL DEEEEATKEDAEAPGI GIRDHESL________ K E D S L - 2 1 0 2 0 0 3 1 1 1 1 0 0 0 1 1 0 0 0 0 0 14 1 1537.7009 P51858;A8K8G0;Q5SZ08;Q5SZ07 P51858 227 240 HDGF Hepatoma-derived growth factor yes no 2;3 0.0035718 64.534 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 2 1 2 42500000 4395800 8937000 5873600 4821000 5965700 12507000 1683 954 1706 7637;7638;7639;7640;7641;7642;7643;7644;7645;7646 5118;5119;5120;5121;5122;5123 5118 6 EDAGDNDDTEGAIGVR GEKKKRSREDAGDNDD TEGAIGVRNKVAGGKM R E D V R N 2 1 1 4 0 0 2 3 0 1 0 0 0 0 0 0 1 0 0 1 0 16 0 1632.6863 Q9H0S4;G5E955 Q9H0S4 426 441 DDX47 Probable ATP-dependent RNA helicase DDX47 yes no 2 2.4105E-11 96.489 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2455100 0 773560 342550 0 0 1339000 1684 1481 1707 7647;7648;7649 5124 5124 1 EDAGDNDDTEGAIGVRNK GEKKKRSREDAGDNDD GAIGVRNKVAGGKMKK R E D N K V 2 1 2 4 0 0 2 3 0 1 0 1 0 0 0 0 1 0 0 1 0 18 1 1874.8242 Q9H0S4;G5E955 Q9H0S4 426 443 DDX47 Probable ATP-dependent RNA helicase DDX47 yes no 3 0.0016728 57.595 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 7760100 1816300 1755600 667290 459950 1209400 1851600 1685 1481 1708 7650;7651;7652;7653;7654;7655 5125;5126;5127;5128 5126 4 EDALVTKNLVPGESVYGEK GVFICRGKEDALVTKN GESVYGEKRVSISEGD K E D E K R 1 0 1 1 0 0 3 2 0 0 2 2 0 0 1 1 1 0 1 3 0 19 1 2047.0474 P22087 P22087 103 121 FBL rRNA 2-O-methyltransferase fibrillarin yes yes 2;3 3.1276E-295 176.85 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 1 2 1 520930000 164130000 138540000 0 119590000 35903000 62751000 1686 862 1709 7656;7657;7658;7659;7660;7661;7662;7663 5129;5130;5131;5132;5133;5134;5135 5130 7 EDCLLGSAK KFKKTKPKEDCLLGSA DCLLGSAKLDEEFEKK K E D A K L 1 0 0 1 1 0 1 1 0 0 2 1 0 0 0 1 0 0 0 0 0 9 0 991.46445 C9JA69;Q8WY36-2;Q8WY36 C9JA69 680 688 BBX HMG box transcription factor BBX yes no 2 0.014363 78.098 By matching By matching By matching By matching By matching By MS/MS 1 3016600 0 0 0 0 0 3016600 1687 238 1710 7664 5136 5136 1 EDCVKGDPVEK ANHKDGKKEDCVKGDP VKGDPVEKEARESSKK K E D E K E 0 0 0 2 1 0 2 1 0 0 0 2 0 0 1 0 0 0 0 2 0 11 1 1274.5813 Q9NWH9;H7BXE3 Q9NWH9 309 319 SLTM SAFB-like transcription modulator yes no 2 0.023327 66.267 By matching By matching By MS/MS By matching By matching By matching 1 504250 0 0 504250 0 0 0 1688 1554 1711 7665 5137 5137 1 EDDEYEAFRK DRPAELSKEDDEYEAF DEYEAFRKRMMLAYRF K E D R K R 1 1 0 2 0 0 3 0 0 0 0 1 0 1 0 0 0 0 1 0 0 10 1 1300.5572 Q8IWZ8 Q8IWZ8 615 624 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 3 0.012359 60.398 By matching By matching By matching By matching By matching By MS/MS 1 1 2530000 0 0 725680 0 0 1804300 1689 1283 1712 7666;7667 5138 5138 1 EDDRSWQGTADGGMMDRDHK DWGDHGRREDDRSWQG GMMDRDHKRWQGGERS R E D H K R 1 2 0 5 0 1 1 3 1 0 0 1 2 0 0 1 1 1 0 0 0 20 2 2305.944 Q15424;F5H1L1;F5H0H3;F5GZU3;B7Z959;B7Z2F6 Q15424 828 847 SAFB Scaffold attachment factor B1 yes no 4 0.0082393 41.422 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 13245000 1469800 1222700 3396800 1754900 2915900 2484900 1690 1137 1713 7668;7669;7670;7671;7672;7673 5139;5140 5140 2 EDEDADGKEVEDADEK LFEESDDKEDEDADGK EVEDADEKLFEDDDSN K E D E K L 2 0 0 5 0 0 5 1 0 0 0 2 0 0 0 0 0 0 0 1 0 16 1 1792.7123 O43719;E9PFP2 O43719 680 695 HTATSF1 HIV Tat-specific factor 1 yes no 3 0.0023897 60.968 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 2942200 0 686060 0 476770 846970 932440 1691 720 1714 7674;7675;7676;7677 5141;5142;5143 5143 3 EDEEEDEPVVIK NRIRMPTKEDEEEDEP EDEPVVIKAQPVPHYG K E D I K A 0 0 0 2 0 0 5 0 0 1 0 1 0 0 1 0 0 0 0 2 0 12 0 1429.646 Q9ULW0;Q96RR5 Q9ULW0 501 512 TPX2;HCA90 Targeting protein for Xklp2 yes no 2 0 223.08 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 79530000 3063900 22137000 8397600 4103600 9070300 32757000 1692 1611 1715 7678;7679;7680;7681;7682;7683 5144;5145;5146;5147;5148;5149;5150;5151 5150 8 EDEEYADEKGLEAADK FDDESDEKEDEEYADE KGLEAADKKAEEGDAD K E D D K K 3 0 0 3 0 0 5 1 0 0 1 2 0 0 0 0 0 0 1 0 0 16 1 1810.7745 O43719 O43719 646 661 HTATSF1 HIV Tat-specific factor 1 yes yes 3 3.3756E-07 93.237 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 20305000 2809000 3159800 5244600 2767600 3306600 3017200 1693 720 1716 7684;7685;7686;7687;7688;7689;7690 5152;5153;5154;5155;5156;5157;5158 5153 6 EDENLVINEVINSPKGK LEVKSDSKEDENLVIN VINSPKGKKRKVEHQT K E D G K K 0 0 3 1 0 0 3 1 0 2 1 2 0 0 1 1 0 0 0 2 0 17 1 1896.9793 Q5FWF5;Q5FWF5-2 Q5FWF5 188 204 ESCO1 N-acetyltransferase ESCO1 yes no 3 0.0031694 66.939 By matching By MS/MS By matching By matching By matching By matching 1 13111000 0 13111000 0 0 0 0 1694 1180 1717 7691 5159 5159 1 EDFAEVCK KQPTGLSKEDFAEVCK EDFAEVCKREGGDPEE K E D C K R 1 0 0 1 1 0 2 0 0 0 0 1 0 1 0 0 0 0 0 1 0 8 0 996.42225 Q9BU76-4;Q9BU76;Q9BU76-2;Q9BU76-3 Q9BU76-4 97 104 MMTAG2 Multiple myeloma tumor-associated protein 2 yes no 2 4.5029E-06 118.74 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 52441000 11236000 5537800 6743400 7266300 11855000 9802500 1695 1449 1718 7692;7693;7694;7695;7696;7697;7698 5160;5161;5162;5163;5164;5165;5166 5165 7 EDFSDMVAEHAAK EQQAQVEKEDFSDMVA MVAEHAAKQKQKKRKA K E D A K Q 3 0 0 2 0 0 2 0 1 0 0 1 1 1 0 1 0 0 0 1 0 13 0 1448.6242 Q13435;E9PPJ0;H0YEX5 Q13435 858 870 SF3B2 Splicing factor 3B subunit 2 yes no 3 0.031863 41.825 By MS/MS By matching By matching By matching By matching By matching 1 1 1 3062700 1137100 592630 0 0 0 1333000 1696 1083 1719 7699;7700;7701 5167 5167 1 EDFVLSITGK KDIRPECREDFVLSIT FVLSITGKKAPGCVLS R E D G K K 0 0 0 1 0 0 1 1 0 1 1 1 0 1 0 1 1 0 0 1 0 10 0 1107.5812 P08651-4;P08651-5;P08651-3;P08651-2;P08651;F8W9H9 P08651-4 81 90 NFIC Nuclear factor 1 C-type yes no 2 0.011321 71.221 By matching By MS/MS By matching By matching By matching By matching 1 4780000 0 4780000 0 0 0 0 1697 563 1720 7702 5168 5168 1 EDGSEVGVGGAQVTGSNTRK TFYGPVKKEDGSEVGV VTGSNTRKHILQVSTF K E D R K H 1 1 1 1 0 1 2 5 0 0 0 1 0 0 0 2 2 0 0 3 0 20 1 1946.9294 Q13618-3;Q13618-2;Q13618;H7C399 Q13618-3 504 523 CUL3 Cullin-3 yes no 3 0.00019091 60.062 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1974600 0 623190 316480 0 0 1034900 1698 1088 1721 7703;7704;7705 5169 5169 1 EDHEVEVGVLK QEVALNLKEDHEVEVG EVEVGVLKESVDLPEE K E D L K E 0 0 0 1 0 0 3 1 1 0 1 1 0 0 0 0 0 0 0 3 0 11 0 1252.6299 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 1488 1498 AHCTF1 Protein ELYS yes no 3 5.5391E-05 100.88 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2765800 0 1144500 0 0 397020 1224300 1699 1345 1722 7706;7707;7708 5170;5171 5171 2 EDHGRGYFEYIEENKYSR KRGVKRPREDHGRGYF IEENKYSRAKSPQPPV R E D S R A 0 2 1 1 0 0 4 2 1 1 0 1 0 1 0 1 0 0 3 0 0 18 2 2291.0243 Q00839;B3KX72;Q5RI18;Q00839-2 Q00839 251 268 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 4 0.0014402 60.949 By matching By matching By matching By matching By matching By MS/MS 1 2116200 0 0 0 0 0 2116200 1700 1022;1023 1723 7709 5172 5172 1 EDIGVGSYSVCK FTDGYEIKEDIGVGSY VGSYSVCKRCVHKATD K E D C K R 0 0 0 1 1 0 1 2 0 1 0 1 0 0 0 2 0 0 1 2 0 12 0 1312.5969 B7Z3B5;F5GYC4;B4DG22;B7ZB17;Q15349;P51812;Q15349-3;Q9UK32;B7ZL90;Q15349-2;F2Z2J1 B7Z3B5 330 341 RPS6KA2;RPS6KA3;RPS6KA6 Ribosomal protein S6 kinase alpha-2;Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-6;Ribosomal protein S6 kinase yes no 2 8.1804E-12 107.39 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1999500 0 749370 0 0 0 1250100 1701 86 1724 7710;7711 5173;5174 5174 2 EDINAIEMEEDK IPYPLITKEDINAIEM AIEMEEDKRDLISREI K E D D K R 1 0 1 2 0 0 4 0 0 2 0 1 1 0 0 0 0 0 0 0 0 12 0 1434.6184 P49756;P49756-2;P49756-3;H0YE46 P49756 262 273 RBM25 RNA-binding protein 25 yes no 2 2.5535E-97 150.14 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 2 1 47856000 6071000 4403500 5181600 3527300 17752000 10921000 1702 942 1725 7712;7713;7714;7715;7716;7717;7718;7719 5175;5176;5177;5178;5179;5180 5180 6 EDLLNNGQPR LERKLRFKEDLLNNGQ LLNNGQPRLTYEERMA K E D P R L 0 1 2 1 0 1 1 1 0 0 2 0 0 0 1 0 0 0 0 0 0 10 0 1154.568 Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-5;Q8WX93-4;Q8WX93-2;Q8WX93-9 Q8WX93-3 534 543 PALLD Palladin yes no 2 0.0049765 87.258 By matching By matching By matching By matching By matching By MS/MS 1 1 1957900 0 0 278390 0 0 1679500 1703 1343 1726 7720;7721 5181;5182 5182 2 EDLLNNGQPRLTYEER LERKLRFKEDLLNNGQ PRLTYEERMARRLLGA K E D E R M 0 2 2 1 0 1 3 1 0 0 3 0 0 0 1 0 1 0 1 0 0 16 1 1945.9494 Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-5;Q8WX93-4;Q8WX93-2;Q8WX93-9 Q8WX93-3 534 549 PALLD Palladin yes no 3 0.015696 42.317 By matching By matching By matching By matching By matching By MS/MS 1 1 3302900 0 653590 0 0 0 2649300 1704 1343 1727 7722;7723 5183 5183 1 EDMAALEK EGEFSEAREDMAALEK EDMAALEKDYEEVGVD R E D E K D 2 0 0 1 0 0 2 0 0 0 1 1 1 0 0 0 0 0 0 0 0 8 0 905.41643 G3V1U9;Q9BQE3;Q71U36;P68363;F5H5D3;F8VXZ4;F8VWX4;E7ET24;A8MUB1;P68366 G3V1U9 388 395 TUBA1A;TUBA1C;TUBA1B;TUBA4A Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain no no 2 0.014732 87.639 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 18882000 1306800 3927400 4506700 857540 2341600 5942200 1705 518;44 1728 7724;7725;7726;7727;7728;7729 5184;5185;5186;5187 5184 4 EDNIGNQLLRK EAYKQQIKEDNIGNQL IGNQLLRKMGWTGGGL K E D R K M 0 1 2 1 0 1 1 1 0 1 2 1 0 0 0 0 0 0 0 0 0 11 1 1298.6943 O15226;G3V1N1 O15226 551 561 NKRF NF-kappa-B-repressing factor yes no 2;3 5.586E-08 107.55 By matching By matching By MS/MS By matching By MS/MS By MS/MS 2 1 2 1 2 1 12831000 1957600 960670 1904700 565340 3590300 3852500 1706 578 1729 7730;7731;7732;7733;7734;7735;7736;7737;7738 5188;5189;5190;5191;5192 5191 5 EDQLLCTDCYSNEYSSK VDKPFAAKEDQLLCTD YSNEYSSKCQECKKTI K E D S K C 0 0 1 2 2 1 2 0 0 0 2 1 0 0 0 3 1 0 2 0 0 17 0 2110.846 Q14192 Q14192 84 100 FHL2 Four and a half LIM domains protein 2 yes yes 2 3.8763E-155 149.73 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 44166000 16392000 3158700 16681000 0 3440700 4493200 1707 1101 1730 7739;7740;7741;7742;7743 5193;5194;5195;5196 5193 4 EDQPAVPGETQGDSYFTGK EYEESVAKEDQPAVPG GDSYFTGKKTIETVKA K E D G K K 1 0 0 2 0 2 2 3 0 0 0 1 0 1 2 1 2 0 1 1 0 19 0 2024.8963 Q9UNX4 Q9UNX4 730 748 WDR3 WD repeat-containing protein 3 yes yes 2 1.0849E-38 112.44 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 16315000 1818100 0 3216700 558880 1202100 9518700 1708 1617 1731 7744;7745;7746;7747;7748 5197;5198;5199 5198 3 EDSAWEPQK SASEEDDKEDSAWEPQ DSAWEPQKKVPRSRKQ K E D Q K K 1 0 0 1 0 1 2 0 0 0 0 1 0 0 1 1 0 1 0 0 0 9 0 1088.4775 Q8N5C6 Q8N5C6 37 45 SRBD1 S1 RNA-binding domain-containing protein 1 yes yes 2 0.0065883 91.265 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 16437000 2275500 3601300 3588700 918880 2737500 3314800 1709 1302 1732 7749;7750;7751;7752;7753;7754 5200;5201 5200 2 EDSNLTLQEK MKKSKSVKEDSNLTLQ SNLTLQEKKEKIQTGL K E D E K K 0 0 1 1 0 1 2 0 0 0 2 1 0 0 0 1 1 0 0 0 0 10 0 1175.567 P46940;H0YLE8 P46940 1446 1455 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 2 0.011321 71.221 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 12438000 0 2918800 0 878360 2781100 5860300 1710 929 1733 7755;7756;7757;7758 5202;5203 5203 2 EDSQPGEQNDQGETGSLPGQQEK KEDEKAAKEDSQPGEQ SLPGQQEKEASASPDP K E D E K E 0 0 1 2 0 5 4 4 0 0 1 1 0 0 2 2 1 0 0 0 0 23 0 2457.0528 Q9NUA8;F8WAI8 Q9NUA8 701 723 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes no 3 0.0020301 49.662 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 14406000 0 1776200 2192400 3503700 4003400 2929900 1711 1545 1734 7759;7760;7761;7762;7763 5204;5205 5204 2 EDSQPPTPVSQR AEEEGEDKEDSQPPTP PPTPVSQRSEEQKSKK K E D Q R S 0 1 0 1 0 2 1 0 0 0 0 0 0 0 3 2 1 0 0 1 0 12 0 1339.6368 Q92785 Q92785 242 253 DPF2 Zinc finger protein ubi-d4 yes yes 2 0.008871 69.846 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 2 5330700 0 1260700 633040 349210 1120700 1967100 1712 1359 1735 7764;7765;7766;7767;7768;7769 5206;5207 5206 2 EDSVKPGAHLTVKK EPKRAVSREDSVKPGA GAHLTVKKIFVGGIKE R E D K K I 1 0 0 1 0 0 1 1 1 0 1 3 0 0 1 1 1 0 0 2 0 14 2 1507.8358 E7EWI9;E7ERJ4;P51991-2;P51991 E7EWI9 92 105 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 3 0.0051565 68.033 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 6819800 0 1102700 1073400 734610 1605900 2303200 1713 371;955 1736 7770;7771;7772;7773;7774 5208;5209 5208 2 EDTEEHHLRDYFEEYGK KLFVGGIKEDTEEHHL DYFEEYGKIDTIEIIT K E D G K I 0 1 0 2 0 0 5 1 2 0 1 1 0 1 0 0 1 0 2 0 0 17 1 2195.9396 P22626;P22626-2 P22626 121 137 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 3 2.8522E-21 101.75 By matching By matching By matching By matching By matching By MS/MS 1 18963000 0 0 0 0 0 18963000 1714 863 1737 7775 5210 5210 1 EDTEELRQKYK RRVLEVEKEDTEELRQ EELRQKYKDYVDKEKA K E D Y K D 0 1 0 1 0 1 3 0 0 0 1 2 0 0 0 0 1 0 1 0 0 11 2 1437.71 Q9UKJ3;Q9UKJ3-2 Q9UKJ3 106 116 GPATCH8 G patch domain-containing protein 8 yes no 3 0.012591 79.148 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 3285000 438620 605590 397580 0 918740 924500 1715 1601 1738 7776;7777;7778;7779;7780 5211 5211 1 EDTEEYNLR KIFVGGIKEDTEEYNL DTEEYNLRDYFEKYGK K E D L R D 0 1 1 1 0 0 3 0 0 0 1 0 0 0 0 0 1 0 1 0 0 9 0 1167.5044 E7EWI9;E7ERJ4;P51991-2;P51991 E7EWI9 113 121 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 2 0.0019716 106.68 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 6556200 0 1722900 0 0 1150700 3682600 1716 371;955 1739 7781;7782;7783 5212;5213;5214 5212 3 EDTEEYNLRDYFEK KIFVGGIKEDTEEYNL NLRDYFEKYGKIETIE K E D E K Y 0 1 1 2 0 0 4 0 0 0 1 1 0 1 0 0 1 0 2 0 0 14 1 1849.8006 E7EWI9;E7ERJ4;P51991-2;P51991 E7EWI9 113 126 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 2;3 1.1339E-42 124.48 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 1 184150000 0 52296000 33363000 41457000 19477000 37560000 1717 371;955 1740 7784;7785;7786;7787;7788;7789 5215;5216;5217;5218;5219 5218 5 EDTGDQQGLLK REAINGQREDTGDQQG GDQQGLLKAIQNDKLA R E D L K A 0 0 0 2 0 2 1 2 0 0 2 1 0 0 0 0 1 0 0 0 0 11 0 1202.5779 Q13111-2;C9JLF8;Q13111-3;Q13111 Q13111-2 152 162 CHAF1A Chromatin assembly factor 1 subunit A yes no 2 0.00033846 97.734 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2176600 0 654200 0 0 0 1522400 1718 258 1741 7790;7791 5220;5221 5221 2 EDVAMELER DPPNDLRKEDVAMELE DVAMELERVGEDEEQM K E D E R V 1 1 0 1 0 0 3 0 0 0 1 0 1 0 0 0 0 0 0 1 0 9 0 1090.4965 O95243-2 O95243-2 37 45 MBD4 Methyl-CpG-binding domain protein 4 no no 2 0.014101 78.556 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 2 1 16891000 2704700 2692600 1875400 1515000 2366000 5736900 1719 769 1742 7792;7793;7794;7795;7796;7797;7798;7799 5222;5223;5224;5225 5224 4 EDVDPHNGADDVFSSSGSLGK EEMKEEMKEDVDPHNG SSSGSLGKASEKSSKD K E D G K A 1 0 1 4 0 0 1 3 1 0 1 1 0 1 1 4 0 0 0 2 0 21 0 2131.9294 Q9NV56 Q9NV56 132 152 MRGBP MRG/MORF4L-binding protein yes yes 3 1.2831E-22 96.012 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 18281000 8112600 0 9017300 0 1151200 0 1720 1547 1743 7800;7801;7802 5226;5227 5227 2 EDVFVHQTAIKK FINRNDTKEDVFVHQT VHQTAIKKNNPRKYLR K E D K K N 1 0 0 1 0 1 1 0 1 1 0 2 0 1 0 0 1 0 0 2 0 12 1 1413.7616 E7ETA0;P67809;H0Y449;P16989-2;P16989-3;P16989 E7ETA0 78 89 YBX1;YBX3 Nuclease-sensitive element-binding protein 1;Y-box-binding protein 3 yes no 3 0.0020854 66.267 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 9585100 1317400 1300900 1163300 0 3858400 1945200 1721 380 1744 7803;7804;7805;7806;7807 5228;5229;5230;5231 5229 4 EDVSASGPSPEATQLAK DPDKEPEKEDVSASGP PEATQLAKQMELEQAV K E D A K Q 3 0 0 1 0 1 2 1 0 0 1 1 0 0 2 3 1 0 0 1 0 17 0 1685.8108 Q96T58 Q96T58 2151 2167 SPEN Msx2-interacting protein yes yes 2 0.0022818 61.127 By matching By MS/MS By matching By matching By matching By matching 1 1 1814100 0 1085700 728380 0 0 0 1722 1422 1745 7808;7809 5232;5233 5232 2 EEAEALYHSK EEIAQRSKEEAEALYH AEALYHSKYEELQVTV K E E S K Y 2 0 0 0 0 0 3 0 1 0 1 1 0 0 0 1 0 0 1 0 0 10 0 1175.5459 P35908;CON__P35908 P35908 365 374 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 2.4731E-05 110.84 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 23228000 430990 6090600 11085000 1426600 727410 3467600 + 1723 302 1746 7810;7811;7812;7813;7814;7815 5234;5235;5236 5235 3 EEAEETNVLPKEK DVYYREGKEEAEETNV TNVLPKEKQTKPAEAP K E E E K Q 1 0 1 0 0 0 5 0 0 0 1 2 0 0 1 0 1 0 0 1 0 13 1 1514.7464 Q14690;F5H7X0 Q14690 1509 1521 PDCD11 Protein RRP5 homolog yes no 3 0.026109 46.159 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3812300 0 0 378290 0 1715100 1718900 1724 1112 1747 7816;7817;7818 5237 5237 1 EEAEIQAELER LRLGHLKKEEAEIQAE EIQAELERLERVRNLH K E E E R L 2 1 0 0 0 1 5 0 0 1 1 0 0 0 0 0 0 0 0 0 0 11 0 1315.6256 Q86UE8-3;Q86UE8-2;Q86UE8;Q9UKI8-3;Q9UKI8-4;Q9UKI8-5;Q9UKI8;Q9UKI8-2 Q86UE8-3 365 375 TLK2;TLK1 Serine/threonine-protein kinase tousled-like 2;Serine/threonine-protein kinase tousled-like 1 yes no 2 0.038051 73.666 By matching By matching By matching By matching By matching By MS/MS 1 611800 0 0 0 0 0 611800 1725 1262 1748 7819 5238 5238 0 EEAGETSPADESGAPK ESNAGSSKEEAGETSP ADESGAPKSGSTGKIC K E E P K S 3 0 0 1 0 0 4 2 0 0 0 1 0 0 2 2 1 0 0 0 0 16 0 1573.6744 Q9UKY1;H0YB50 Q9UKY1 642 657 ZHX1 Zinc fingers and homeoboxes protein 1 yes no 2 0.001271 79.346 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 5110500 405060 1274500 595990 375010 823720 1636200 1726 1604 1749 7820;7821;7822;7823;7824;7825 5239;5240;5241 5239 3 EEAGGEAAAAAAAERGEMK KKAEQQQREEAGGEAA AAERGEMKAAAGQESE R E E M K A 8 1 0 0 0 0 5 3 0 0 0 1 1 0 0 0 0 0 0 0 0 19 1 1817.8214 O14497-2;O14497 O14497-2 33 51 ARID1A AT-rich interactive domain-containing protein 1A yes no 3 0.032115 34.669 By matching By matching By matching By matching By matching By MS/MS 1 1 1935400 0 0 0 0 559700 1375700 1727 694 1750 7826;7827 5242 5242 1 EEAGGLLQCPEVAK QEEVGGVKEEAGGLLQ LQCPEVAKADRWLEDS K E E A K A 2 0 0 0 1 1 3 2 0 0 2 1 0 0 1 0 0 0 0 1 0 14 0 1499.729 Q7Z5J4-3;E7EVZ3;Q7Z5J4;A8MTC3;Q7Z5J4-2;C9JWB0;A8MXE8;Q7Z5J4-4;E7ETW1 Q7Z5J4-3 820 833 RAI1 Retinoic acid-induced protein 1 yes no 2 0.0090624 51.771 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1830800 0 888250 0 0 0 942590 1728 39 1751 7828;7829 5243;5244 5244 2 EEAQWTPTK KLQQQEQREEAQWTPT EAQWTPTKLSSKNVSG R E E T K L 1 0 0 0 0 1 2 0 0 0 0 1 0 0 1 0 2 1 0 0 0 9 0 1088.5138 Q5SW79-2;Q5SW79-3;H0Y2V6;Q5SW79 Q5SW79-2 657 665 CEP170 Centrosomal protein of 170 kDa yes no 2 0.039895 60.064 By matching By matching By matching By MS/MS By matching By matching 1 1 648160 398020 0 0 250150 0 0 1729 604 1752 7830;7831 5245 5245 1 EEAVKEKSPSLGK PEKKPKIKEEAVKEKS EKSPSLGKKDARQTPK K E E G K K 1 0 0 0 0 0 3 1 0 0 1 3 0 0 1 2 0 0 0 1 0 13 2 1400.7511 O76021;B4DJ58 O76021 436 448 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 3 0.028664 56.414 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 6798000 2197300 1016200 1167600 778560 234080 1404200 1730 753 1753 7832;7833;7834;7835;7836;7837 5246 5246 1 EEDIAVLAEEK EKPGEQEKEEDIAVLA IAVLAEEKIELLCQDQ K E E E K I 2 0 0 1 0 0 4 0 0 1 1 1 0 0 0 0 0 0 0 1 0 11 0 1244.6136 Q8TAF3-2;C9JQ19;Q8TAF3-5;Q8TAF3-4;Q8TAF3-3;Q8TAF3 Q8TAF3-2 70 80 WDR48 WD repeat-containing protein 48 yes no 2 0.010566 64.224 By matching By MS/MS By matching By matching By matching By matching 1 1 3721400 0 1199800 0 0 0 2521600 1731 264 1754 7838;7839 5247 5247 1 EEEDDHMEYCRVCK EGEEEGEKEEEDDHME MEYCRVCKDGGELLCC K E E C K D 0 1 0 2 2 0 4 0 1 0 0 1 1 0 0 0 0 0 1 1 0 14 1 1898.7233 Q12873;E9PG89;Q12873-2;H7C2H0 Q12873 450 463 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 3;4 0.001128 74.698 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 5809200 0 1912900 0 0 0 3896300 1732 430 1755 7840;7841;7842;7843 5248;5249;5250;5251 5248 4 EEEDEELDLNK GTEEKHKKEEEDEELD DEELDLNKALQHAGKH K E E N K A 0 0 1 2 0 0 5 0 0 0 2 1 0 0 0 0 0 0 0 0 0 11 0 1361.5834 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3;Q8WVX6 Q7Z5K2 1097 1107 WAPAL Wings apart-like protein homolog yes no 2 0.0019166 89.805 By matching By matching By matching By matching By matching By MS/MS 1 1 952170 0 0 0 160340 0 791830 1733 1253 1756 7844;7845 5252 5252 1 EEEEEEEEDQEGDRETTIRGK WKADLLQREEEEEEEE RETTIRGKATPAEEEK R E E G K A 0 2 0 2 0 1 10 2 0 1 0 1 0 0 0 0 2 0 0 0 0 21 2 2536.0685 Q15269 Q15269 240 260 PWP2 Periodic tryptophan protein 2 homolog yes yes 3;4 2.4945E-07 81.656 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1993900 0 1020200 0 0 973710 0 1734 1134 1757 7846;7847;7848 5253;5254 5253 2 EEEEEENFPGQASSQQVHSENIK WGPVKVKKEEEEEENF QVHSENIKVWAPVQGL K E E I K V 1 0 2 0 0 3 7 1 1 1 0 1 0 1 1 3 0 0 0 1 0 23 0 2644.1525 P13682;C9JGR2;C9J011;C9JGS9 P13682 22 44 ZNF35 Zinc finger protein 35 yes no 3 3.3251E-14 83.666 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 16024000 0 2807000 2287800 6499800 2187700 2241200 1735 835 1758 7849;7850;7851;7852;7853 5255;5256;5257 5257 3 EEEEEVFESSVPQR QTLLALEKEEEEEVFE FESSVPQRSTLAELKS K E E Q R S 0 1 0 0 0 1 6 0 0 0 0 0 0 1 1 2 0 0 0 2 0 14 0 1692.7479 O60566-2;C9JLW5;O60566;O60566-3;H0YMK5 O60566-2 157 170 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes no 2 0.0288 41.621 By matching By matching By matching By matching By matching By MS/MS 1 266860 0 0 0 0 0 266860 1736 259 1759 7854 5258 5258 1 EEEEEYEEEGEEEGEK EGVQWEAKEEEEEYEE EGEEEGEKEEEDDHME K E E E K E 0 0 0 0 0 0 12 2 0 0 0 1 0 0 0 0 0 0 1 0 0 16 0 1971.7229 Q12873;E9PG89;Q12873-2;H7C2H0 Q12873 434 449 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 2 3.6643E-12 100.43 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 10645000 0 5359500 1655800 172630 0 3456800 1737 430 1760 7855;7856;7857;7858 5259;5260 5259 2 EEEELMEKPQKETK AEIASKEKEEEELMEK EKPQKETKKDEDPENK K E E T K K 0 0 0 0 0 1 6 0 0 0 1 3 1 0 1 0 1 0 0 0 0 14 2 1746.8346 Q13123;Q9H4P6;E7EQZ7;D6REL4 Q13123 184 197 IK Protein Red yes no 3 0.0051753 67.997 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 2638400 0 441540 656760 205690 544520 789930 1738 1071 1761 7859;7860;7861;7862;7863 5261 5261 1 EEEEVRQQALLAK AARLAKEKEEEEVRQQ RQQALLAKKEKDIQKK K E E A K K 2 1 0 0 0 2 4 0 0 0 2 1 0 0 0 0 0 0 0 1 0 13 1 1541.8049 Q99543;Q99543-2 Q99543 327 339 DNAJC2 DnaJ homolog subfamily C member 2 yes no 3 0.0018304 73.632 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 9500900 1664000 1668200 1259700 1348300 1889000 1671600 1739 1426 1762 7864;7865;7866;7867;7868;7869 5262;5263;5264;5265;5266 5264 5 EEEGVPDEEGWVK AEEEAKAKEEEGVPDE PDEEGWVKVTRRGRRP K E E V K V 0 0 0 1 0 0 5 2 0 0 0 1 0 0 1 0 0 1 0 2 0 13 0 1501.6573 Q9Y3A4;Q9NSQ0 Q9Y3A4 193 205 RRP7A;RRP7B Ribosomal RNA-processing protein 7 homolog A;Putative ribosomal RNA-processing protein 7 homolog B yes no 2 2.5543E-06 100.73 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 20496000 0 5780900 10497000 0 4218500 0 1740 1643 1763 7870;7871;7872 5267;5268 5267 2 EEEGVPDEEGWVKVTR AEEEAKAKEEEGVPDE EGWVKVTRRGRRPVLP K E E T R R 0 1 0 1 0 0 5 2 0 0 0 1 0 0 1 0 1 1 0 3 0 16 1 1857.8745 Q9Y3A4;Q9NSQ0 Q9Y3A4 193 208 RRP7A;RRP7B Ribosomal RNA-processing protein 7 homolog A;Putative ribosomal RNA-processing protein 7 homolog B yes no 3 0.0028063 55.782 By matching By MS/MS By matching By matching By matching By matching 1 1 8138500 0 5555500 0 2583000 0 0 1741 1643 1764 7873;7874 5269 5269 1 EEEIEVDSR SSPFRRVREEEIEVDS EEIEVDSRVADNSFDA R E E S R V 0 1 0 1 0 0 4 0 0 1 0 0 0 0 0 1 0 0 0 1 0 9 0 1104.4935 Q14978;Q14978-3;Q14978-2 Q14978 630 638 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 0.0097402 85.533 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 31649000 5592500 5803600 1451800 734570 13989000 4077500 1742 1120 1765 7875;7876;7877;7878;7879;7880 5270;5271;5272;5273 5271 4 EEEIEVDSRVADNSFDAK SSPFRRVREEEIEVDS ADNSFDAKRGAAGDWG R E E A K R 2 1 1 3 0 0 4 0 0 1 0 1 0 1 0 2 0 0 0 2 0 18 1 2051.9284 Q14978;Q14978-3;Q14978-2 Q14978 630 647 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 3 1.3946E-73 125.67 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 200540000 162080000 5153400 5347900 0 25867000 2099100 1743 1120 1766 7881;7882;7883;7884;7885 5274;5275;5276;5277 5277 4 EEEMGEEEEVER KVAQYVVREEEMGEEE GEEEEVEREIIKQEES R E E E R E 0 1 0 0 0 0 8 1 0 0 0 0 1 0 0 0 0 0 0 1 0 12 0 1493.5828 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1263 1274 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 2.2944E-37 127.52 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 17841000 0 4236300 1428400 0 246200 11931000 1744 486 1767 7886;7887;7888;7889 5278;5279;5280 5278 3 EEESIEGEKEVK KIEENSLKEEESIEGE IEGEKEVKSTAPETAI K E E V K S 0 0 0 0 0 0 6 1 0 1 0 2 0 0 0 1 0 0 0 1 0 12 1 1404.662 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1547 1558 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.026188 49.448 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 9080300 277980 0 2824200 0 372440 5605600 1745 486 1768 7890;7891;7892;7893 5281 5281 1 EEESIEGEKEVKSTAPETAIECTQAPAPASEDEK KIEENSLKEEESIEGE APASEDEKVVVEPPEG K E E E K V 5 0 0 1 1 1 10 1 0 2 0 3 0 0 3 3 3 0 0 1 0 34 2 3688.6785 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1547 1580 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 4 3.3281E-17 57.097 By matching By matching By MS/MS By matching By matching By matching 1 9257100 0 0 9257100 0 0 0 1746 486 1769 7894 5282;5283 5283 2 EEETSIDVAGKPNEVTK NEQKKESKEEETSIDV GKPNEVTKAAESPDQK K E E T K A 1 0 1 1 0 0 4 1 0 1 0 2 0 0 1 1 2 0 0 2 0 17 1 1844.9004 P53985 P53985 463 479 SLC16A1 Monocarboxylate transporter 1 yes yes 3 0.0026127 52.862 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 6670500 1908200 848850 850050 893570 1449300 720550 1747 964 1770 7895;7896;7897;7898;7899;7900 5284;5285;5286 5285 3 EEEVSGVSDPQPQDAGSRK VEAPPKRREEEVSGVS PQDAGSRKLSPTKEAF R E E R K L 1 1 0 2 0 2 3 2 0 0 0 1 0 0 2 3 0 0 0 2 0 19 1 2013.9239 O00257 O00257 329 347 CBX4 E3 SUMO-protein ligase CBX4 yes yes 3 0.0048704 41.422 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 6766400 1006200 1225000 1091400 830210 1580700 1032900 1748 687 1771 7901;7902;7903;7904;7905;7906 5287;5288 5288 2 EEEVSLQGINTRK KVTQLDPKEEEVSLQG LQGINTRKAFRSSTIQ K E E R K A 0 1 1 0 0 1 3 1 0 1 1 1 0 0 0 1 1 0 0 1 0 13 1 1501.7736 Q9Y6W5;Q9Y6W5-2 Q9Y6W5 86 98 WASF2 Wiskott-Aldrich syndrome protein family member 2 yes no 3 0.00012806 87.216 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 1749 1663 1772 7907 5289 5289 1 EEEWDPEYTPK NDFQKRNREEEWDPEY WDPEYTPKSKKYYLHD R E E P K S 0 0 0 1 0 0 4 0 0 0 0 1 0 0 2 0 1 1 1 0 0 11 0 1421.5987 Q9Y2W1;Q9NYF8-2;Q9NYF8;Q9NYF8-4;H0YF14 Q9Y2W1 866 876 THRAP3;BCLAF1 Thyroid hormone receptor-associated protein 3;Bcl-2-associated transcription factor 1 no no 2 3.2138E-127 160.77 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 32242000 5943300 4896200 3125100 3255600 7971300 7051000 1750 1639;1563 1773 7908;7909;7910;7911;7912;7913;7914 5290;5291;5292;5293;5294;5295;5296 5294 7 EEEWDPEYTPKSK NDFQKRNREEEWDPEY PEYTPKSKKYYLHDDR R E E S K K 0 0 0 1 0 0 4 0 0 0 0 2 0 0 2 1 1 1 1 0 0 13 1 1636.7257 Q9Y2W1;Q9NYF8-2;Q9NYF8;Q9NYF8-4;H0YF14 Q9Y2W1 866 878 THRAP3;BCLAF1 Thyroid hormone receptor-associated protein 3;Bcl-2-associated transcription factor 1 no no 2;3 0.016894 54.276 By MS/MS By matching By matching By matching By matching By matching 2 2 1 1 32752000 10711000 4293400 9422100 0 8325500 0 1751 1639;1563 1774 7915;7916;7917;7918;7919;7920 5297;5298 5297 2 EEFEHQQKELEK DKNQTAEKEEFEHQQK HQQKELEKVCNPIITK K E E E K V 0 0 0 0 0 2 5 0 1 0 1 2 0 1 0 0 0 0 0 0 0 12 1 1572.742 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PS65 P11142 590 601 HSPA8 Heat shock cognate 71 kDa protein yes no 3 0.0057656 63.694 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 3836600 0 1054400 696680 0 285380 1800100 1752 824 1775 7921;7922;7923;7924 5299;5300 5299 2 EEFLTGTEK MESLETAKEEFLTGTE EFLTGTEKRVILNCCE K E E E K R 0 0 0 0 0 0 3 1 0 0 1 1 0 1 0 0 2 0 0 0 0 9 0 1052.5026 Q9NUA8;B1AKC8 Q9NUA8 380 388 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes no 2 0.011969 82.287 By matching By matching By matching By matching By matching By MS/MS 1 1 4513900 0 0 0 1336800 0 3177000 1753 1545 1776 7925;7926 5301;5302 5302 2 EEGETADTVGCCSLR ALRAGNEKEEGETADT TVGCCSLRVEHINLHP K E E L R V 1 1 0 1 2 0 3 2 0 0 1 0 0 0 0 1 2 0 0 1 0 15 0 1682.6876 P11387 P11387 494 508 TOP1 DNA topoisomerase 1 yes yes 2 0.018938 43.05 By matching By matching By matching By matching By MS/MS By matching 1 919040 0 0 0 0 919040 0 1754 825 1777 7927 5303 5303 1 EEHIYPTIIGTER EGKVAAFKEEHIYPTI PTIIGTERDERSMAQW K E E E R D 0 1 0 0 0 0 3 1 1 3 0 0 0 0 1 0 2 0 1 0 0 13 0 1556.7835 F5H1S9;G8JLB3;Q9Y606-2;Q9Y606 F5H1S9 317 329 PUS1 tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial yes no 3 0.028936 43.03 By matching By matching By matching By matching By matching By MS/MS 1 4787600 0 0 0 0 0 4787600 1755 511 1778 7928 5304 5304 1 EEHKLQDSVPENKGISLR SNDMKTNKEEHKLQDS ENKGISLRSRRQNKTE K E E L R S 0 1 1 1 0 1 3 1 1 1 2 2 0 0 1 2 0 0 0 1 0 18 2 2078.0756 P46013;F5H4V4;P46013-2 P46013 3075 3092 MKI67 Antigen KI-67 no no 3;4 9.2569E-05 83.894 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 2 2 121230000 6351500 23296000 14338000 5216700 22090000 49938000 1756 919;920 1779 7929;7930;7931;7932;7933;7934;7935;7936;7937;7938;7939;7940 5305;5306;5307;5308;5309;5310;5311;5312;5313 5311 9 EEIAFSDPTPDGK IYGSYLSKEEIAFSDP SDPTPDGKLFATQYCG K E E G K L 1 0 0 2 0 0 2 1 0 1 0 1 0 1 2 1 1 0 0 0 0 13 0 1404.6409 Q5FWF5 Q5FWF5 804 816 ESCO1 N-acetyltransferase ESCO1 yes yes 2 0.0019351 72.891 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 1 2 11621000 1987900 1911600 908060 502570 2494800 3816400 1757 1180 1780 7941;7942;7943;7944;7945;7946;7947;7948;7949 5314;5315;5316;5317;5318;5319;5320;5321 5320 7 EEIDPDEEESAK EDIEKEVKEEIDPDEE PDEEESAKKKHLDKKR K E E A K K 1 0 0 2 0 0 5 0 0 1 0 1 0 0 1 1 0 0 0 0 0 12 0 1389.5783 Q14692 Q14692 811 822 BMS1 Ribosome biogenesis protein BMS1 homolog yes yes 2 0.012185 57.175 By matching By matching By matching By matching By matching By MS/MS 1 432810 0 0 0 0 0 432810 1758 1113 1781 7950 5322 5322 1 EEIEQSLTK KSEIQTLKEEIEQSLT EIEQSLTKRDEFEFLE K E E T K R 0 0 0 0 0 1 3 0 0 1 1 1 0 0 0 1 1 0 0 0 0 9 0 1075.5397 Q14258 Q14258 293 301 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 0.032422 63.426 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3948100 0 1075700 0 0 1136300 1736100 1759 1105 1782 7951;7952;7953 5323 5323 1 EEIKAENTTGNWLTAK DTSDNEAKEEIKAENT TGNWLTAKSGRKKRCP K E E A K S 2 0 2 0 0 0 3 1 0 1 1 2 0 0 0 0 3 1 0 0 0 16 1 1803.9003 Q9NYD6 Q9NYD6 251 266 HOXC10 Homeobox protein Hox-C10 yes yes 3 1.0026E-11 99.238 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 19147000 4203300 2919200 7529300 1815800 0 2679100 1760 1562 1783 7954;7955;7956;7957;7958 5324;5325;5326;5327 5327 3 EEINKNISDFGR ARDHKEPKEEINKNIS KNISDFGRQQLLPPFP K E E G R Q 0 1 2 1 0 0 2 1 0 2 0 1 0 1 0 1 0 0 0 0 0 12 1 1420.6947 Q9H9B1-3;Q9H9B1;Q9H9B1-4;C9JD67;Q9H9B1-2 Q9H9B1-3 235 246 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes no 3 0.0033239 71.176 By matching By MS/MS By matching By matching By matching By matching 1 1 2004700 411280 1593400 0 0 0 0 1761 1507 1784 7959;7960 5328 5328 1 EEIPVQEKTPKK PNLNNLRKEEIPVQEK VQEKTPKKRMALDDKL K E E K K R 0 0 0 0 0 1 3 0 0 1 0 3 0 0 2 0 1 0 0 1 0 12 2 1424.7875 Q96B01-2;Q96B01;Q96B01-3;F5H1Y0;H0YGT5;H0YFK6;F5H4V6;F5H031;F5H710 Q96B01-2 58 69 RAD51AP1 RAD51-associated protein 1 yes no 3 0.016963 63.944 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 4322600 322150 991260 896810 0 599070 1513300 1762 1369 1785 7961;7962;7963;7964;7965 5329;5330 5330 2 EEISGSGTQPGGAKEETK KQEPFEPKEEISGSGT GGAKEETKVFSGGDTE K E E T K V 1 0 0 0 0 1 4 4 0 1 0 2 0 0 1 2 2 0 0 0 0 18 1 1803.8487 Q96C00 Q96C00 294 311 ZBTB9 Zinc finger and BTB domain-containing protein 9 yes yes 3 0.00092108 68.978 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 9828400 1826100 1389500 1401900 832500 1697700 2680600 1763 1373 1786 7966;7967;7968;7969;7970;7971 5331;5332;5333;5334;5335 5334 5 EEKDQDELKPGPTNR KKPEDIKKEEKDQDEL LKPGPTNRSRVTKSGS K E E N R S 0 1 1 2 0 1 3 1 0 0 1 2 0 0 2 0 1 0 0 0 0 15 2 1754.8435 Q14151 Q14151 543 557 SAFB2 Scaffold attachment factor B2 yes yes 3;4 0.0021295 80.507 By matching By matching By MS/MS By matching By matching By MS/MS 2 2 2 2 2 2 25853000 3496500 1580800 4243500 3310100 6012200 7209700 1764 1097 1787 7972;7973;7974;7975;7976;7977;7978;7979;7980;7981;7982;7983 5336;5337 5337 2 EELAEAEIIK KGILERGKEELAEAEI LAEAEIIKDSPDSPEP K E E I K D 2 0 0 0 0 0 4 0 0 2 1 1 0 0 0 0 0 0 0 0 0 10 0 1143.6023 B4DNK1;Q9NVM9;F5GZE7;H0YH12 B4DNK1 511 520 ASUN Protein asunder homolog yes no 2 0.0026717 99.973 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 1 4495200 0 1449800 0 435500 0 2609900 1765 110 1788 7984;7985;7986;7987 5338;5339;5340 5338 3 EELEHPGVEHFKEEDKLK MKTNSHVKEELEHPGV FKEEDKLKLKKPEKNL K E E L K L 0 0 0 1 0 0 6 1 2 0 2 3 0 1 1 0 0 0 0 1 0 18 2 2192.075 Q92576-2;Q92576;E7EVH3;E9PE34;B3KP41;D6R9X2 Q92576-2 557 574 PHF3 PHD finger protein 3 yes no 3 0.0099206 50.376 By matching By matching By matching By matching By matching By MS/MS 1 1 1681900 0 0 0 136710 0 1545100 1766 1353 1789 7988;7989 5341 5341 1 EELEQASQAHGAR ISNLSQAKEELEQASQ ASQAHGARLTAQVASL K E E A R L 3 1 0 0 0 2 3 1 1 0 1 0 0 0 0 1 0 0 0 0 0 13 0 1424.6644 Q14980-2;Q14980;F5H4J1;F5H6Y5 Q14980-2 483 495 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2;3 0.0010855 79.283 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 1 42436000 5829900 6436000 7048400 2211900 10102000 10808000 1767 1121 1790 7990;7991;7992;7993;7994;7995;7996;7997;7998;7999;8000 5342;5343;5344;5345;5346;5347;5348;5349;5350;5351 5349 10 EELEQTYHAK DAQVRLYKEELEQTYH LEQTYHAKLENARLSS K E E A K L 1 0 0 0 0 1 3 0 1 0 1 1 0 0 0 0 1 0 1 0 0 10 0 1246.583 E9PBF6;P20700 E9PBF6 262 271 LMNB1 Lamin-B1 yes no 2;3 0.0042247 88.134 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 2 1 2 6354500 1030100 1419300 2098000 224050 0 1583100 1768 406 1791 8001;8002;8003;8004;8005;8006;8007;8008;8009 5352;5353;5354;5355;5356 5353 5 EELGFRPEYSASQLK PGCFVKNREELGFRPE EYSASQLKGFSLLATE R E E L K G 1 1 0 0 0 1 3 1 0 0 2 1 0 1 1 2 0 0 1 0 0 15 1 1752.8683 P09874;F8WC10 P09874 168 182 PARP1 Poly [ADP-ribose] polymerase 1 yes no 3 0.0042333 59.864 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 12846000 0 5512700 0 0 0 7332800 1769 815 1792 8010;8011 5357;5358 5358 1 EELHQDCLVLATAK TSLDHRSKEELHQDCL CLVLATAKHSRELNED K E E A K H 2 0 0 1 1 1 2 0 1 0 3 1 0 0 0 0 1 0 0 1 0 14 0 1625.8083 Q8TEQ6 Q8TEQ6 861 874 GEMIN5 Gem-associated protein 5 yes yes 3 0.0009228 75.483 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 2 1 1 1 7273800 1123700 1173000 942390 367310 1273400 2394100 1770 1338 1793 8012;8013;8014;8015;8016;8017;8018 5359;5360;5361;5362;5363 5361 5 EELKQIQEER KSNLELFKEELKQIQE LKQIQEERDERHKTKG K E E E R D 0 1 0 0 0 2 4 0 0 1 1 1 0 0 0 0 0 0 0 0 0 10 1 1300.6623 O15042-2;E7ET15;O15042;E7EW00;H0Y8D9 O15042-2 209 218 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 3 0.026392 59.067 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2619300 300390 835630 0 0 0 1483300 1771 378 1794 8019;8020;8021 5364 5364 1 EELLAVGK SLGKVGVKEELLAVGK EELLAVGKFTRTSGET K E E G K F 1 0 0 0 0 0 2 1 0 0 2 1 0 0 0 0 0 0 0 1 0 8 0 857.48583 P46013;F5H4V4;P46013-2 P46013 1036 1043 MKI67 Antigen KI-67 no no 1;2 0.0058315 95.741 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 2 2 2 2 2 2 287070000 21592000 57311000 35996000 16943000 39966000 115260000 1772 919;920 1795 8022;8023;8024;8025;8026;8027;8028;8029;8030;8031;8032;8033 5365;5366;5367;5368;5369 5368 5 EELLAVGKFTR SLGKVGVKEELLAVGK LAVGKFTRTSGETTHT K E E T R T 1 1 0 0 0 0 2 1 0 0 2 1 0 1 0 0 1 0 0 1 0 11 1 1261.703 P46013;F5H4V4;P46013-2 P46013 1036 1046 MKI67 Antigen KI-67 no no 2;3 0.0051062 91.469 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 2 1 1 122240000 20755000 61926000 0 8126500 0 31435000 1773 919;920 1796 8034;8035;8036;8037;8038 5370;5371;5372;5373;5374 5372 5 EELLAVGKLTQTSGETTHTDKEPVGEGK RAQKVEVKEELLAVGK KEPVGEGKGTKAFKQP K E E G K G 1 0 0 1 0 1 5 4 1 0 3 3 0 0 1 1 5 0 0 2 0 28 2 2953.488 P46013;F5H4V4;P46013-2 P46013 2853 2880 MKI67 Antigen KI-67 no no 4 1.3889E-29 84.159 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 14105000 6640700 0 7464000 0 0 0 1774 919;920 1797 8039;8040 5375;5376 5375 1 EELLAVGKLTQTSGETTHTHTEPTGDGK SLGKVGVKEELLAVGK TEPTGDGKSMKAFMES K E E G K S 1 0 0 1 0 1 4 4 2 0 3 2 0 0 1 1 7 0 0 1 0 28 1 2936.4363 P46013;F5H4V4;P46013-2 P46013 1644 1671 MKI67 Antigen KI-67 no no 4 1.6913E-24 83.059 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 49134000 13693000 3944700 27482000 3217600 0 796490 1775 919;920 1798 8041;8042;8043;8044;8045 5377;5378;5379;5380 5378 4 EELMSSDLEETAGSTSIPK KKKKSFSKEELMSSDL AGSTSIPKRKKSTPKE K E E P K R 1 0 0 1 0 0 4 1 0 1 2 1 1 0 1 4 2 0 0 0 0 19 0 2022.9303 O00567 O00567 515 533 NOP56 Nucleolar protein 56 yes yes 2 2.4854E-38 111.65 By matching By matching By matching By MS/MS By matching By matching 1 3700600 0 0 0 3700600 0 0 1776 692 1799 8046 5381 5381 1 EELNSSVAIADTALEDRKNK GSEVVVVKEELNSSVA ALEDRKNKLDTVQTLK K E E N K L 3 1 2 2 0 0 3 0 0 1 2 2 0 0 0 2 1 0 0 1 0 20 2 2202.1128 Q8N5C6 Q8N5C6 85 104 SRBD1 S1 RNA-binding domain-containing protein 1 yes yes 3;4 3.9686E-38 110.74 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 211450000 56690000 0 66721000 0 29085000 58951000 1777 1302 1800 8047;8048;8049;8050;8051;8052;8053;8054 5382;5383;5384;5385;5386;5387;5388;5389 5385 7 EELQANGSAPAADK AAAESGAKEELQANGS GSAPAADKEEPAAAGS K E E D K E 4 0 1 1 0 1 2 1 0 0 1 1 0 0 1 1 0 0 0 0 0 14 0 1399.6579 P29966 P29966 56 69 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 0.0011055 77.192 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 7176600 672570 1359100 1115700 573090 657820 2798200 1778 886 1801 8055;8056;8057;8058;8059;8060 5390;5391;5392;5393;5394;5395 5392 6 EELRLEEAK ERMIKQLKEELRLEEA ELRLEEAKLVLLKKLR K E E A K L 1 1 0 0 0 0 4 0 0 0 2 1 0 0 0 0 0 0 0 0 0 9 1 1115.5823 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7;C9JHD7;C9JJK9 Q86YP4 150 158 GATAD2A Transcriptional repressor p66-alpha yes no 2 0.02884 83.647 By matching By matching By matching By matching By matching By MS/MS 1 1 8711500 0 2515800 0 0 0 6195700 1779 170 1802 8061;8062 5396 5396 1 EELSAVER TRPRKEVKEELSAVER EELSAVERLTQTSGQS K E E E R L 1 1 0 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 0 1 0 8 0 931.46108 P46013;F5H4V4;P46013-2 P46013 2614 2621 MKI67 Antigen KI-67 no no 2 0.008839 93.143 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 12933000 1449800 3086600 2772200 468430 0 5155900 1780 919;920 1803 8063;8064;8065;8066;8067 5397;5398 5398 2 EELSAVERLTQTSGQSTHTHKEPASGDEGIK TRPRKEVKEELSAVER ASGDEGIKVLKQRAKK K E E I K V 2 1 0 1 0 2 5 3 2 1 2 2 0 0 1 4 4 0 0 1 0 31 2 3321.6073 P46013;F5H4V4;P46013-2 P46013 2614 2644 MKI67 Antigen KI-67 no no 4;5 5.8632E-25 70.027 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 2 2 1 3 64237000 3422300 880310 18096000 4746800 1946200 35145000 1781 919;920 1804 8068;8069;8070;8071;8072;8073;8074;8075;8076;8077 5399;5400;5401;5402 5401 2 EELSEEGYLAK DLETKLRKEELSEEGY SEEGYLAKVKSLLNKD K E E A K V 1 0 0 0 0 0 4 1 0 0 2 1 0 0 0 1 0 0 1 0 0 11 0 1266.598 F5GX68 F5GX68 71 81 DNMT1 Cytosine-specific methyltransferase no no 2 3.4112E-05 102.53 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 9378200 647580 1844500 0 0 1239700 5646400 1782 487 1805 8078;8079;8080;8081 5403;5404;5405 5405 3 EELSEEGYLAKVK DLETKLRKEELSEEGY EGYLAKVKSLLNKDLS K E E V K S 1 0 0 0 0 0 4 1 0 0 2 2 0 0 0 1 0 0 1 1 0 13 1 1493.7613 F5GX68 F5GX68 71 83 DNMT1 Cytosine-specific methyltransferase no no 3 0.0011626 90.434 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 6118000 0 1497600 3675100 0 0 945350 1783 487 1806 8082;8083;8084 5406;5407 5407 2 EELVEMCNGK RTPPITTKEELVEMCN LVEMCNGKNGILEDSQ K E E G K N 0 0 1 0 1 0 3 1 0 0 1 1 1 0 0 0 0 0 0 1 0 10 0 1207.5213 Q5T200-2;Q5T200 Q5T200-2 1040 1049 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 2 0.027035 58.592 By matching By matching By matching By matching By matching By MS/MS 1 1585500 0 0 0 0 0 1585500 1784 1188 1807 8085 5408 5408 1 EENAEQAESTEVSSSGISISKTPIMK TFDGSFVKEENAEQAE ISKTPIMKMMKNKVEN K E E M K M 2 0 1 0 0 1 5 1 0 3 0 2 1 0 1 6 2 0 0 1 0 26 1 2751.312 Q9UKY1 Q9UKY1 160 185 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 3 2.4269E-250 157.7 By matching By MS/MS By matching By matching By matching By matching 1 18035000 0 18035000 0 0 0 0 1785 1604 1808 8086 5409 5409 1 EENLFSWKGAK SLGRGWGREENLFSWK LFSWKGAKGRGMRGRG R E E A K G 1 0 1 0 0 0 2 1 0 0 1 2 0 1 0 1 0 1 0 0 0 11 1 1307.651 P38432 P38432 398 408 COIL Coilin yes yes 2;3 0.003254 85.672 By matching By matching By matching By matching By MS/MS By MS/MS 1 2 13693000 0 0 0 0 2178900 11514000 1786 904 1809 8087;8088;8089 5410;5411;5412 5411 3 EENMDTSNTSISK KEDNIQAKEENMDTSN TSNTSISKMKRSRPTS K E E S K M 0 0 2 1 0 0 2 0 0 1 0 1 1 0 0 3 2 0 0 0 0 13 0 1454.6195 D6RFF0;H0YA82;Q4G0J3 D6RFF0 238 250 LARP7 La-related protein 7 yes no 2 0.0033528 63.727 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1752700 0 259830 391580 0 424880 676450 1787 327 1810 8090;8091;8092;8093 5413;5414;5415 5415 3 EENVCCMYSAEK CSYPPSVKEENVCCMY CCMYSAEKRAKSGPEA K E E E K R 1 0 1 0 2 0 3 0 0 0 0 1 1 0 0 1 0 0 1 1 0 12 0 1518.5789 Q9NYD6 Q9NYD6 107 118 HOXC10 Homeobox protein Hox-C10 yes yes 2 0.002394 95.094 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 13972000 0 2536300 2601600 1708100 1211300 5915000 1788 1562 1811 8094;8095;8096;8097;8098 5416;5417;5418;5419 5417 2 EEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEK GSAPAADKEEPAAAGS AGASPVEKEAPAEGEA K E E E K E 14 0 0 0 0 0 6 4 0 0 0 2 0 0 5 4 0 0 0 1 0 36 1 3203.5218 P29966 P29966 70 105 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 0.0027205 25.604 By matching By matching By MS/MS By matching By matching By matching 1 1116500 0 0 1116500 0 0 0 1789 886 1812 8099 5420 5420 1 EEPADFPVEQPEEN ELEEETAKEEPADFPV PVEQPEEN________ K E E E N - 1 0 1 1 0 1 5 0 0 0 0 0 0 1 3 0 0 0 0 1 0 14 0 1628.6842 Q5BKZ1;Q5BKZ1-3 Q5BKZ1 569 582 ZNF326 DBIRD complex subunit ZNF326 yes no 2 0.0012837 84.297 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 11375000 0 0 5430200 483980 1309300 4151600 1790 1177 1813 8100;8101;8102;8103 5421;5422 5422 2 EEPCGSLSETVCK TPKHSPIKEEPCGSLS SLSETVCKRELRSQET K E E C K R 0 0 0 0 2 0 3 1 0 0 1 1 0 0 1 2 1 0 0 1 0 13 0 1494.633 Q68DK7;Q68DK7-3;Q68DK7-2 Q68DK7 366 378 MSL1 Male-specific lethal 1 homolog yes no 2 0.011303 54.199 By MS/MS By MS/MS By matching By matching By matching By MS/MS 2 1 1 1 1 1 9955000 1644600 2093700 1424000 631570 1455100 2706000 1791 1218 1814 8104;8105;8106;8107;8108;8109;8110 5423;5424;5425 5423 2 EEPLAVSK PLVKVDMKEEPLAVSK EEPLAVSKLTRTSGET K E E S K L 1 0 0 0 0 0 2 0 0 0 1 1 0 0 1 1 0 0 0 1 0 8 0 871.4651 P46013;F5H4V4;P46013-2 P46013 2493 2500 MKI67 Antigen KI-67 no no 2 0.003853 109.48 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 43491000 2539400 12166000 22061000 1494500 0 5230900 1792 919;920 1815 8111;8112;8113;8114;8115 5426;5427;5428 5426 3 EEPLAVSKLTR PLVKVDMKEEPLAVSK LAVSKLTRTSGETTQT K E E T R T 1 1 0 0 0 0 2 0 0 0 2 1 0 0 1 1 1 0 0 1 0 11 1 1241.698 P46013;F5H4V4;P46013-2 P46013 2493 2503 MKI67 Antigen KI-67 no no 3 0.0034151 83.081 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 8990700 0 2935200 3027800 2043400 335910 648380 1793 919;920 1816 8116;8117;8118;8119;8120 5429;5430 5429 2 EEPLSEEEPCTSTAIASPEK RGKKKHIKEEPLSEEE TAIASPEKKKKKKKKR K E E E K K 2 0 0 0 1 0 6 0 0 1 1 1 0 0 3 3 2 0 0 0 0 20 0 2202.9838 Q9Y2X3 Q9Y2X3 498 517 NOP58 Nucleolar protein 58 yes yes 2 8.2439E-18 98.175 By MS/MS By matching By matching By matching By matching By matching 1 3011500 3011500 0 0 0 0 0 1794 1640 1817 8121 5431 5431 1 EEPQTVPEAR GRGASTFKEEPQTVPE PQTVPEARSRDATPPV K E E A R S 1 1 0 0 0 1 3 0 0 0 0 0 0 0 2 0 1 0 0 1 0 10 0 1154.5568 P17275 P17275 241 250 JUNB Transcription factor jun-B yes yes 2 0.030463 57.174 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2 1 9465700 0 1346700 1447600 1046200 2589800 3035400 1795 848 1818 8122;8123;8124;8125;8126;8127 5432;5433 5433 2 EEPSQNDISPKTK KSKKAKKKEEPSQNDI NDISPKTKSLRKKKEP K E E T K S 0 0 1 1 0 1 2 0 0 1 0 2 0 0 2 2 1 0 0 0 0 13 1 1471.7155 Q9NR30;Q9NR30-2 Q9NR30 81 93 DDX21 Nucleolar RNA helicase 2 yes no 3 0.00030582 87.831 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1134300 0 0 0 521780 612520 0 1796 1534 1819 8128;8129;8130 5434;5435 5435 2 EEPTESQGLAAR EGASDTEREEPTESQG ESQGLAARLRRPSPPE R E E A R L 2 1 0 0 0 1 3 1 0 0 1 0 0 0 1 1 1 0 0 0 0 12 0 1286.6103 Q9P1Y6-2;E9PJ24;F8WEF5;Q9P1Y6-3;Q9P1Y6 Q9P1Y6-2 920 931 PHRF1 PHD and RING finger domain-containing protein 1 yes no 2 0.0018287 83.182 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 2839200 0 607460 347870 0 666450 1217400 1797 446 1820 8131;8132;8133;8134 5436;5437 5436 2 EEPVEEAEEEAPEASTAPKEAGPSK KQLKIQVKEEPVEEAE PKEAGPSKEASLWPCE K E E S K E 5 0 0 0 0 0 9 1 0 0 0 2 0 0 4 2 1 0 0 1 0 25 1 2610.1821 Q9ULJ3-2;Q9ULJ3 Q9ULJ3-2 679 703 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes no 3 0.031714 30.976 By matching By matching By MS/MS By matching By matching By matching 1 1192500 0 0 1192500 0 0 0 1798 1607 1821 8135 5438 5438 1 EEPVIVTPPTK PQAVNNYKEEPVIVTP VIVTPPTKQSLVKVLK K E E T K Q 0 0 0 0 0 0 2 0 0 1 0 1 0 0 3 0 2 0 0 2 0 11 0 1208.6653 Q8IX90-3;Q8IX90 Q8IX90-3 184 194 SKA3 Spindle and kinetochore-associated protein 3 yes no 2 0.0035513 81.92 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 3569800 767110 797820 703270 0 0 1301600 1799 1286 1822 8136;8137;8138;8139 5439;5440 5440 1 EEPVNVNIPEK PIASVRIKEEPVNVNI VNVNIPEKTTALNNMD K E E E K T 0 0 2 0 0 0 3 0 0 1 0 1 0 0 2 0 0 0 0 2 0 11 0 1266.6456 Q6PCB5-2;Q6PCB5 Q6PCB5-2 494 504 RSBN1L Round spermatid basic protein 1-like protein yes no 2 0.019417 56.205 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 4288300 1454700 969860 0 0 0 1863700 1800 1228 1823 8140;8141;8142 5441;5442 5442 2 EEPWDHTEK QGNEAEEREEPWDHTE EPWDHTEKTEEEPVSG R E E E K T 0 0 0 1 0 0 3 0 1 0 0 1 0 0 1 0 1 1 0 0 0 9 0 1169.4989 Q96RL1;F8VQY2;Q96RL1-3;F2Z2T8;Q96RL1-2 Q96RL1 180 188 UIMC1 BRCA1-A complex subunit RAP80 yes no 2 0.016108 74.165 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 4330600 0 0 1456800 0 788180 2085600 1801 535 1824 8143;8144;8145 5443;5444 5443 2 EEQLSSYEDK INNELKRKEEQLSSYE QLSSYEDKLFDVCGSQ K E E D K L 0 0 0 1 0 1 3 0 0 0 1 1 0 0 0 2 0 0 1 0 0 10 0 1226.5303 Q92878-2;Q92878;Q92878-3;E7EN38 Q92878-2 625 634 RAD50 DNA repair protein RAD50 yes no 2 2.8681E-09 117.14 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 7874900 0 1720400 1516700 284480 1458300 2895000 1802 1362 1825 8146;8147;8148;8149;8150 5445;5446;5447;5448;5449 5447 5 EEQPTGPPAESR KKPEPDAREEQPTGPP TGPPAESRAMAFSTGY R E E S R A 1 1 0 0 0 1 3 1 0 0 0 0 0 0 3 1 1 0 0 0 0 12 0 1296.5946 F5H4P2;Q6GQQ9 F5H4P2 673 684 OTUD7B OTU domain-containing protein 7B yes no 2 0.0039872 66.538 By matching By matching By matching By matching By matching By MS/MS 1 1 1 912380 0 0 0 132150 180050 600180 1803 517 1826 8151;8152;8153 5450 5450 1 EERAHLKEPPPAASK KKDVSKEKEERAHLKE EPPPAASKGAPATPHL K E E S K G 3 1 0 0 0 0 3 0 1 0 1 2 0 0 3 1 0 0 0 0 0 15 2 1658.874 Q99958 Q99958 178 192 FOXC2 Forkhead box protein C2 yes yes 3;4 0.001696 72.815 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 17462000 3059500 3791100 1493000 3098800 2608900 3410700 1804 1434 1827 8154;8155;8156;8157;8158;8159 5451;5452;5453 5451 3 EERIDTPPACTEESIATPSEIK PCDSPKVKEERIDTPP IATPSEIKTENDTVES K E E I K T 2 1 0 1 1 0 5 0 0 3 0 1 0 0 3 2 3 0 0 0 0 22 1 2472.169 O94913 O94913 1525 1546 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 3 8.0497E-06 61.985 By matching By MS/MS By matching By matching By matching By matching 1 3221600 0 3221600 0 0 0 0 1805 758 1828 8160 5454 5454 1 EESAASGGAAYTK STYGSSQKEESAASGG SGGAAYTKRYLEEQKT K E E T K R 4 0 0 0 0 0 2 2 0 0 0 1 0 0 0 2 1 0 1 0 0 13 0 1240.5572 Q9Y2W1 Q9Y2W1 334 346 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.035405 42.797 By matching By MS/MS By matching By matching By matching By matching 1 1 2411300 0 442350 1968900 0 0 0 1806 1639 1829 8161;8162 5455 5455 1 EESAASGGAAYTKR STYGSSQKEESAASGG GGAAYTKRYLEEQKTE K E E K R Y 4 1 0 0 0 0 2 2 0 0 0 1 0 0 0 2 1 0 1 0 0 14 1 1396.6583 Q9Y2W1 Q9Y2W1 334 347 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.0068406 48.527 By matching By matching By MS/MS By matching By matching By matching 1 1 1013900 0 0 894570 119340 0 0 1807 1639 1830 8163;8164 5456 5456 1 EESAHWVTHTSYCF HSSAKRSKEESAHWVT VTHTSYCF________ K E E C F - 1 0 0 0 1 0 2 0 2 0 0 0 0 1 0 2 2 1 1 1 0 14 0 1752.7202 Q9BY42;A8MSH5 Q9BY42 293 306 RTFDC1 Protein RTF2 homolog yes no 3 0.011455 48.115 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 20631000 0 8487500 0 12143000 0 0 1808 38 1831 8165;8166 5457;5458 5458 2 EESIVSSLRLAYK DLAKVVSKEESIVSSL SSLRLAYKDLEIQMKK K E E Y K D 1 1 0 0 0 0 2 0 0 1 2 1 0 0 0 3 0 0 1 1 0 13 1 1493.809 H0Y6A0;C9JZR4;E9PB03;Q9NP61 H0Y6A0 115 127 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes no 3 0.0022759 67.879 By matching By matching By matching By MS/MS By matching By matching 1 6505400 0 0 0 6505400 0 0 1809 276 1832 8167 5459 5459 1 EESLQQNVGQEEAEIK GQKLGLTKEESLQQNV GQEEAEIKSGLCVPGE K E E I K S 1 0 1 0 0 3 5 1 0 1 1 1 0 0 0 1 0 0 0 1 0 16 0 1829.8643 G3V3V0;Q8IXJ9-2;E7EPD6;A6NIZ6;Q8IXJ9 G3V3V0 140 155 ASXL1 Putative Polycomb group protein ASXL1 yes no 2 0.0041734 51.76 By MS/MS By matching By matching By matching By matching By matching 1 711140 711140 0 0 0 0 0 1810 25 1833 8168 5460 5460 1 EESSELEQPFAQDTSSVGPDRK TCKSEPVKEESSELEQ SSVGPDRKLAEEEDLF K E E R K L 1 1 0 2 0 2 4 1 0 0 1 1 0 1 2 4 1 0 0 1 0 22 1 2435.1088 Q14151;A8MXT5;C9JPX0;Q15424;F5H1L1;F5H0H3;F5GZU3;B7Z2F6 Q14151 231 252 SAFB2;SAFB Scaffold attachment factor B2;Scaffold attachment factor B1 no no 3 1.7615E-33 101.38 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 22543000 7629100 2617400 5853200 1426700 2520200 2496700 1811 1097;1137 1834 8169;8170;8171;8172;8173;8174 5461;5462;5463;5464 5464 4 EESTEVLKAQSAGTVR AAGKKTEKEESTEVLK AQSAGTVRSAAPPQEK K E E V R S 2 1 0 0 0 1 3 1 0 0 1 1 0 0 0 2 2 0 0 2 0 16 1 1703.869 G5E9D3;P20810-5;E7ESM9;P20810-7;P20810-6;B7Z468;F8W7E0;H0Y7F0;P20810-3;E9PDE4;E7ES10;P20810-4;E9PCH5;G5E946;B7Z574;P20810-2;P20810;H0Y9H6;E7EVY3;H0YA91 G5E9D3 296 311 CAST Calpastatin yes no 3 7.1495E-07 91.076 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 2 1 1 2 1 1 36906000 8600000 4067900 7553800 5873200 6308100 4503200 1812 375 1835 8175;8176;8177;8178;8179;8180;8181;8182 5465;5466;5467;5468 5465 4 EESTEVLKAQSAGTVRSAAPPQEK AAGKKTEKEESTEVLK SAAPPQEKKRKVEKDT K E E E K K 4 1 0 0 0 2 4 1 0 0 1 2 0 0 2 3 2 0 0 2 0 24 2 2512.2769 G5E9D3;P20810-5;E7ESM9;P20810-7;P20810-6;B7Z468;F8W7E0;H0Y7F0;P20810-3;E9PDE4;E7ES10;P20810-4;E9PCH5;G5E946;B7Z574;P20810-2;P20810;H0Y9H6;E7EVY3;H0YA91 G5E9D3 296 319 CAST Calpastatin yes no 4 0.023938 32.576 By matching By matching By MS/MS By matching By matching By matching 1 1 1 7057400 0 1610700 2805400 2641300 0 0 1813 375 1836 8183;8184;8185 5469 5469 1 EESTTGNANLLEK REAAKAKKEESTTGNA GNANLLEKTGGVDFHM K E E E K T 1 0 2 0 0 0 3 1 0 0 2 1 0 0 0 1 2 0 0 0 0 13 0 1404.6733 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;F5GWN9;F5H540;F5H797;F5H8B8;F5H692;F5H7D5 F5H101 107 119 NOL8 Nucleolar protein 8 yes no 2 0.0015176 75.102 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 3617800 0 851920 785570 382900 755920 841490 1814 27 1837 8186;8187;8188;8189;8190 5470;5471 5470 2 EETEGETEYKFEWQK AKKENKEKEETEGETE EYKFEWQKGAPREKYA K E E Q K G 0 0 0 0 0 1 6 1 0 0 0 2 0 1 0 0 2 1 1 0 0 15 1 1931.8425 Q86X95-2;Q86X95 Q86X95-2 86 100 CIR1 Corepressor interacting with RBPJ 1 yes no 3 0.0024714 59.709 By MS/MS By matching By matching By matching By matching By matching 1 3842500 3842500 0 0 0 0 0 1815 1270 1838 8191 5472 5472 1 EETVNDPEEAGHR KRKKSTPKEETVNDPE DPEEAGHRSGSKKKRK K E E H R S 1 1 1 1 0 0 4 1 1 0 0 0 0 0 1 0 1 0 0 1 0 13 0 1481.6383 O00567 O00567 541 553 NOP56 Nucleolar protein 56 yes yes 3 0.0042879 61.11 By matching By matching By matching By matching By matching By MS/MS 1 845550 0 0 0 0 0 845550 1816 692 1839 8192 5473 5473 1 EETVNDPEEAGHRSGSK KRKKSTPKEETVNDPE AGHRSGSKKKRKFSKE K E E S K K 1 1 1 1 0 0 4 2 1 0 0 1 0 0 1 2 1 0 0 1 0 17 1 1840.8187 O00567 O00567 541 557 NOP56 Nucleolar protein 56 yes yes 3;4 0.0015231 69.431 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 2 2 2 2 1 2 32906000 7614100 4762800 4093500 4158800 5476200 6800700 1817 692 1840 8193;8194;8195;8196;8197;8198;8199;8200;8201;8202;8203 5474;5475;5476;5477;5478 5474 5 EEVAYDPEDETILEEAK PEAAAAEREEVAYDPE ETILEEAKVTVDDLPN R E E A K V 2 0 0 2 0 0 6 0 0 1 1 1 0 0 1 0 1 0 1 1 0 17 0 1978.8895 Q9BTC0 Q9BTC0 1422 1438 DIDO1 Death-inducer obliterator 1 yes yes 2 1.9118E-209 162.26 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 61155000 0 50007000 0 11148000 0 0 1818 1447 1841 8204;8205 5479;5480 5480 2 EEVEEVLDSK KAPLICTKEEVEEVLD VEEVLDSKAGWGSPCH K E E S K A 0 0 0 1 0 0 4 0 0 0 1 1 0 0 0 1 0 0 0 2 0 10 0 1175.5558 Q7Z5J4-3;E7EVZ3;Q7Z5J4;A8MTC3;Q7Z5J4-2;C9JWB0;A8MXE8;Q7Z5J4-4;E7ETW1 Q7Z5J4-3 902 911 RAI1 Retinoic acid-induced protein 1 yes no 2 0.0097058 75.229 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 4727400 0 2750000 0 172490 0 1804800 1819 39 1842 8206;8207;8208 5481;5482 5482 2 EEVEHMIQK SGAQPVGREEVEHMIQ EVEHMIQKNQCLFTNT R E E Q K N 0 0 0 0 0 1 3 0 1 1 0 1 1 0 0 0 0 0 0 1 0 9 0 1141.5438 B7Z367;Q9UL40;D6RJ07;B7Z6B6;B7Z6Q2 B7Z367 57 65 ZNF346 Zinc finger protein 346 yes no 2 0.0078535 97.635 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 2343800 0 0 626800 246940 1470000 0 1820 184 1843 8209;8210;8211 5483;5484 5483 2 EEVEVAQVQVPTPAR EELLPLEKEEVEVAQV VQVPTPARDSAGVPAP K E E A R D 2 1 0 0 0 2 3 0 0 0 0 0 0 0 2 0 1 0 0 4 0 15 0 1650.8577 Q7Z2T5 Q7Z2T5 15 29 TRMT1L TRMT1-like protein yes yes 2 1.1962E-86 138.81 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 17953000 0 8086600 0 1477500 0 8388500 1821 1248 1844 8212;8213;8214 5485;5486;5487;5488 5488 4 EEVLPVGK SLGKVGVKEEVLPVGK EEVLPVGKLTQTSGKT K E E G K L 0 0 0 0 0 0 2 1 0 0 1 1 0 0 1 0 0 0 0 2 0 8 0 869.48583 P46013;F5H4V4;P46013-2 P46013 2010 2017 MKI67 Antigen KI-67 no no 2 0.023409 77.058 By MS/MS By matching By matching By matching By matching By matching 1 638290 638290 0 0 0 0 0 1822 919;920 1845 8215 5489 5489 1 EEVPMCSDAESR TSSDAESREEVPMCSD MCSDAESRQEVPMCTG R E E S R Q 1 1 0 1 1 0 3 0 0 0 0 0 1 0 1 2 0 0 0 1 0 12 0 1408.5599 F2Z2E1;Q96EK7;F5GZX9;F5GY05;Q96EK7-2 F2Z2E1 339 350 FAM120B Constitutive coactivator of peroxisome proliferator-activated receptor gamma yes no 2 0.0032457 71.268 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1986000 0 632800 0 0 264010 1089200 1823 474 1846 8216;8217;8218 5490 5490 1 EEVVLLTHGDSVDK SLFRGLQKEEVVLLTH THGDSVDKVADGFKVV K E E D K V 0 0 0 2 0 0 2 1 1 0 2 1 0 0 0 1 1 0 0 3 0 14 0 1539.7781 F8W720;B4DUT7;P49915 F8W720 47 60 GMPS GMP synthase [glutamine-hydrolyzing] yes no 2;3 1.0952E-70 136.6 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 2 58761000 7491400 14032000 9586000 5538600 5658700 16454000 1824 129 1847 8219;8220;8221;8222;8223;8224;8225;8226;8227;8228;8229 5491;5492;5493;5494;5495;5496;5497;5498 5495 7 EEWDARQSIIR QAMKPMTKEEWDARQS DARQSIIRKVVDPETG K E E I R K 1 2 0 1 0 1 2 0 0 2 0 0 0 0 0 1 0 1 0 0 0 11 1 1401.7001 Q66PJ3;F5GYV5;H7BZV4;B3V0L1;F8WCT1;F5H7X4;Q66PJ3-4;Q66PJ3-3;Q66PJ3-2 Q66PJ3 298 308 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 yes no 3 0.018355 57.149 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5789100 894630 0 0 709690 0 4184800 1825 1214 1848 8230;8231;8232 5499 5499 1 EEYQLVQVEQK CICFYQHKEEYQLVQV QLVQVEQKAGIKFKRI K E E Q K A 0 0 0 0 0 3 3 0 0 0 1 1 0 0 0 0 0 0 1 2 0 11 0 1391.6933 Q9NR30;Q9NR30-2 Q9NR30 545 555 DDX21 Nucleolar RNA helicase 2 yes no 2 0.0033559 83.045 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 5550000 850510 527940 0 640340 1676100 1855000 1826 1534 1849 8233;8234;8235;8236;8237 5500;5501;5502;5503 5503 4 EFAAALTAER YQHLEGAKEFAAALTA AAALTAERIKTPPKRP K E F E R I 4 1 0 0 0 0 2 0 0 0 1 0 0 1 0 0 1 0 0 0 0 10 0 1077.5455 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 324 333 EZH2 Histone-lysine N-methyltransferase EZH2 yes no 2 0.019424 64.103 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4644200 377350 0 0 0 1882700 2384100 1827 1149 1850 8238;8239;8240 5504 5504 1 EFAAGYNVK PGSNEEIKEFAAGYNV FAAGYNVKFDMFSKIC K E F V K F 2 0 1 0 0 0 1 1 0 0 0 1 0 1 0 0 0 0 1 1 0 9 0 997.4869 P36969-2;P36969 P36969-2 91 99 GPX4 Phospholipid hydroperoxide glutathione peroxidase, mitochondrial yes no 2 0.032183 63.534 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 26709000 2758900 4289400 2462600 4800400 7525600 4872400 1828 902 1851 8241;8242;8243;8244;8245;8246 5505 5505 1 EFEDDLVK VDIARKRKEFEDDLVK EFEDDLVKESSSCGKD K E F V K E 0 0 0 2 0 0 2 0 0 0 1 1 0 1 0 0 0 0 0 1 0 8 0 993.46549 O43148;O43148-2 O43148 61 68 RNMT mRNA cap guanine-N7 methyltransferase yes no 2 0.014854 87.181 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 7134800 771930 2052500 801920 0 0 3508400 1829 709 1852 8247;8248;8249;8250 5506;5507 5507 2 EFEEESKQPGVSEQQR SLADSNAREFEEESKQ PGVSEQQRHQLKHREL R E F Q R H 0 1 0 0 0 3 5 1 0 0 0 1 0 1 1 2 0 0 0 1 0 16 1 1905.8704 O94776 O94776 65 80 MTA2 Metastasis-associated protein MTA2 yes yes 3 0.0015114 76.156 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 27756000 0 7363300 4693300 0 195690 15503000 1830 754 1853 8251;8252;8253;8254 5508;5509 5508 2 EFEEESKQPGVSEQQRHQLK SLADSNAREFEEESKQ EQQRHQLKHRELFLSR R E F L K H 0 1 0 0 0 4 5 1 1 0 1 2 0 1 1 2 0 0 0 1 0 20 2 2412.167 O94776 O94776 65 84 MTA2 Metastasis-associated protein MTA2 yes yes 3;4;5 4.8452E-27 106.35 By matching By MS/MS By matching By matching By matching By MS/MS 3 2 1 3 53341000 0 10734000 6119800 0 994190 35493000 1831 754 1854 8255;8256;8257;8258;8259;8260;8261;8262;8263 5510;5511;5512;5513;5514 5512 5 EFLMNTLNQSDTKTSK GKDQSHRKEFLMNTLN QSDTKTSKTIPSEKLN K E F S K T 0 0 2 1 0 1 1 0 0 0 2 2 1 1 0 2 3 0 0 0 0 16 1 1855.8986 O94913;E9PKN0;E9PQ01 O94913 316 331 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes no 3 2.4576E-11 96.489 By MS/MS By matching By matching By matching By matching By matching 1 3781000 3781000 0 0 0 0 0 1832 758 1855 8264 5515 5515 1 EFNPTKPLLSVNK STLNPNAKEFNPTKPL KPLLSVNKSTSTPTSP K E F N K S 0 0 2 0 0 0 1 0 0 0 2 2 0 1 2 1 1 0 0 1 0 13 1 1485.8191 Q8WWM7-6;Q8WWM7-5;Q8WWM7-4;A8K1R6;Q8WWM7-2;Q63ZY4;H3BUF6;Q8WWM7;Q8WWM7-3 Q8WWM7-6 665 677 ATXN2L Ataxin-2-like protein yes no 3 0.020436 48.532 By matching By matching By matching By MS/MS By matching By matching 1 2729100 0 0 0 2729100 0 0 1833 36 1856 8265 5516 5516 1 EFREISYLK RKEWVTPKEFREISYL FREISYLKKLKVKKQD K E F L K K 0 1 0 0 0 0 2 0 0 1 1 1 0 1 0 1 0 0 1 0 0 9 1 1183.6237 P09874 P09874 338 346 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 0.024671 99.568 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 23921000 0 2901200 4929500 5114100 690920 10285000 1834 815 1857 8266;8267;8268;8269;8270 5517 5517 1 EFRGLGDCLVK VGKAGAEREFRGLGDC GLGDCLVKIYKSDGIK R E F V K I 0 1 0 1 1 0 1 2 0 0 2 1 0 1 0 0 0 0 0 1 0 11 1 1292.6547 P12236;P05141 P05141 153 163 SLC25A6;SLC25A5 ADP/ATP translocase 3;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 3 0.0042239 78.513 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 21794000 20049000 0 0 1745700 0 0 1835 795;826 1858 8271;8272 5518;5519 5518 2 EFSLHHSQVPTVN ASLRLKAKEFSLHHSQ HSQVPTVN________ K E F V N - 0 0 1 0 0 1 1 0 2 0 1 0 0 1 1 2 1 0 0 2 0 13 0 1493.7263 Q99811 Q99811 241 253 PRRX2 Paired mesoderm homeobox protein 2 yes yes 3 0.0013884 86.911 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 3027500 0 336100 1020700 301360 0 1369400 1836 1433 1859 8273;8274;8275;8276 5520;5521 5521 2 EFSSESGVKYHILK YRCLLCPKEFSSESGV GVKYHILKTHAENWFR K E F L K T 0 0 0 0 0 0 2 1 1 1 1 2 0 1 0 3 0 0 1 1 0 14 1 1622.8304 Q96KM6 Q96KM6 792 805 ZNF512B Zinc finger protein 512B yes yes 3;4 0.0013395 82.85 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 1 2 2 25033000 2024700 3426400 3962000 1051800 4727900 9840200 1837 1402 1860 8277;8278;8279;8280;8281;8282;8283;8284;8285;8286;8287 5522;5523;5524;5525;5526;5527;5528 5524 7 EFTDHQETQAELQK ELYKKFEKEFTDHQET ETQAELQKKEAKINEL K E F Q K K 1 0 0 1 0 3 3 0 1 0 1 1 0 1 0 0 2 0 0 0 0 14 0 1702.7798 Q9NSV4-6;A8MYX0;Q9NSV4-5;C9JL55;Q9NSV4-4;C9JDG1;Q9NSV4;C9JDG0;Q9NSV4-1;A6NG52;Q9NSV4-7;Q9NSV4-2;F8W838 Q9NSV4-6 449 462 DIAPH3 Protein diaphanous homolog 3 yes no 3 0.00092213 73.877 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4074300 0 0 1433700 1075200 0 1565400 1838 54 1861 8288;8289;8290 5529;5530 5529 2 EGAEEIDRHVER RKIKKDGKEGAEEIDR EIDRHVERRRSRSPRR K E G E R R 1 2 0 1 0 0 4 1 1 1 0 0 0 0 0 0 0 0 0 1 0 12 1 1438.6801 Q5VTL8 Q5VTL8 246 257 PRPF38B Pre-mRNA-splicing factor 38B yes yes 3 0.023115 50.791 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 2 1 120680000 0 16905000 12241000 8986400 36177000 46370000 1839 1203 1862 8291;8292;8293;8294;8295;8296 5531;5532;5533 5531 3 EGAFSNFPISEETIK QEIPVEQKEGAFSNFP PISEETIKLLKGRGVT K E G I K L 1 0 1 0 0 0 3 1 0 2 0 1 0 2 1 2 1 0 0 0 0 15 0 1667.8043 Q9NR30;Q9NR30-2;F5H3H6;Q9BQ39 Q9NR30 185 199 DDX21;DDX50 Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 no no 2 0.00017507 87.447 By matching By matching By matching By matching By MS/MS By matching 1 347500000 0 0 0 0 347500000 0 1840 1534;515 1863 8297 5534 5534 1 EGAIQGNTWEKPK E G P K 1 0 1 0 0 1 2 2 0 1 0 2 0 0 1 0 1 1 0 0 0 13 1 1456.731 REV__D6R9K2 yes yes 3 0.0041401 62.694 By matching By matching By MS/MS By matching By matching By matching 2 1 1 1 8273200 0 0 2870300 771400 1345500 3286100 + 1841 1667 1864 8298;8299;8300;8301;8302 5535 5535 1 EGCQMDKEPSAVK EPEDTEDKEGCQMDKE DKEPSAVKKKPKPTNP K E G V K K 1 0 0 1 1 1 2 1 0 0 0 2 1 0 1 1 0 0 0 1 0 13 1 1477.6541 Q9ULU4-14;Q2HXV3;Q9ULU4-12;Q9ULU4-13;B7ZM62;H7C4X9;Q9ULU4-8;Q2HXV1;Q9ULU4-9;F8WAN7;Q9ULU4-5;Q9ULU4-10;Q9ULU4-7;E7ETU8;F5H0X3;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;H7C0U2;Q9ULU4;Q9ULU4-11;Q9ULU4-2 Q9ULU4-14 616 628 ZMYND8 Protein kinase C-binding protein 1 yes no 3 0.040114 41.48 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3540400 0 607150 423030 0 526790 1983400 1842 1160 1865 8303;8304;8305;8306 5536 5536 1 EGCTVSPETISLNVKGPGLQR LRMRKNVKEGCTVSPE VKGPGLQRMVLVDLPG K E G Q R M 0 1 1 0 1 1 2 3 0 1 2 1 0 0 2 2 2 0 0 2 0 21 1 2241.1423 O60313;E5KLK1;E5KLJ6;E5KLJ9;O60313-2;E5KLJ5 O60313 373 393 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 3 2.5296E-05 61.276 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 34482000 0 17883000 0 0 0 16599000 1843 336 1866 8307;8308 5537;5538 5537 2 EGDIIPPLTGATPPLIGHLK PFHFTLPKEGDIIPPL PPLIGHLKLEPKRHST K E G L K L 1 0 0 1 0 0 1 3 1 3 3 1 0 0 4 0 2 0 0 0 0 20 0 2038.1463 Q12888;Q12888-2;A6NNK5;F8VY86;H7C3N7 Q12888 911 930 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.015966 49.306 By matching By matching By matching By matching By MS/MS By matching 1 0 0 0 0 0 0 0 1844 1063 1867 8309 5539 5539 1 EGDVEEPTDDSLPTTGDAGGREPMEEK QGLQERSKEGDVEEPT GREPMEEKLLEIQGKI K E G E K L 1 1 0 4 0 0 6 4 0 0 1 1 1 0 3 1 3 0 0 1 0 27 1 2860.2193 Q9UKN8 Q9UKN8 642 668 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 3 2.4039E-06 58.952 By matching By matching By matching By matching By matching By MS/MS 1 5383200 0 0 0 0 0 5383200 1845 1602 1868 8310 5540 5540 1 EGEDSSVIHYDDK TDGGGDNKEGEDSSVI SVIHYDDKAIERLLDR K E G D K A 0 0 0 3 0 0 2 1 1 1 0 1 0 0 0 2 0 0 1 1 0 13 0 1492.6318 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1214 1226 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2;3 1.2796E-46 127.78 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 1 2 2 93988000 0 27779000 15305000 483470 2834400 47586000 1846 486 1869 8311;8312;8313;8314;8315;8316;8317;8318;8319 5541;5542;5543;5544;5545 5541 5 EGEDSSVIHYDDKAIER TDGGGDNKEGEDSSVI YDDKAIERLLDRNQDE K E G E R L 1 1 0 3 0 0 3 1 1 2 0 1 0 0 0 2 0 0 1 1 0 17 1 1961.8967 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1214 1230 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3;4 5.3386E-08 93.424 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 2 16747000 0 4084800 4829400 0 0 7832800 1847 486 1870 8320;8321;8322;8323;8324;8325 5546;5547;5548;5549;5550;5551 5548 6 EGEEEVPEIQEK REVKEPRKEGEEEVPE EVPEIQEKEEQEEGRE K E G E K E 0 0 0 0 0 1 6 1 0 1 0 1 0 0 1 0 0 0 0 1 0 12 0 1414.6464 Q6PJG2;F6RU81 Q6PJG2 941 952 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 2 2.2757E-65 142.76 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 1 2 2 2 22575000 2811600 4019200 2680000 2028800 6469500 4565600 1848 1231 1871 8326;8327;8328;8329;8330;8331;8332;8333;8334;8335 5552;5553;5554;5555;5556 5554 4 EGEIYCKGCYAK ESTTLTEKEGEIYCKG YCKGCYAKNFGPKGFG K E G A K N 1 0 0 0 2 0 2 2 0 1 0 2 0 0 0 0 0 0 2 0 0 12 1 1476.6377 Q16527;F8VW96 Q16527 162 173 CSRP2 Cysteine and glycine-rich protein 2 yes no 2;3 8.7407E-07 102.53 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 4 2 2 2 2 41344000 12195000 8964700 0 6682500 3668300 9833500 1849 1152 1872 8336;8337;8338;8339;8340;8341;8342;8343;8344;8345;8346;8347 5557;5558;5559;5560;5561;5562;5563;5564;5565;5566 5565 10 EGELCCSEAGQRPENIGQLEAK HLLMSISKEGELCCSE NIGQLEAKCLASPSLN K E G A K C 2 1 1 0 2 2 5 3 0 1 2 1 0 0 1 1 0 0 0 0 0 22 1 2474.1166 Q8TD26 Q8TD26 1787 1808 CHD6 Chromodomain-helicase-DNA-binding protein 6 yes yes 3 0.0058524 43.848 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 5467700 0 1120200 2153200 0 588340 1606000 1850 1335 1873 8348;8349;8350;8351 5567;5568 5568 2 EGESGECAVAESEDR ETFLTSTKEGESGECA AVAESEDRAADLLAVH K E G D R A 2 1 0 1 1 0 5 2 0 0 0 0 0 0 0 2 0 0 0 1 0 15 0 1623.6319 Q8NFC6 Q8NFC6 1612 1626 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 0.0005295 72.615 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 2991200 0 949960 448240 0 558490 1034500 1851 1325 1874 8352;8353;8354;8355 5569;5570 5569 2 EGGEGFTVDTPAK VLKTSDSKEGGEGFTV FTVDTPAKASITSKRH K E G A K A 1 0 0 1 0 0 2 3 0 0 0 1 0 1 1 0 2 0 0 1 0 13 0 1306.6041 Q8NFC6 Q8NFC6 1345 1357 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 7.5185E-24 113.76 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 17129000 1354100 4943400 2320200 1253700 2858100 4399400 1852 1325 1875 8356;8357;8358;8359;8360;8361;8362 5571;5572;5573;5574;5575;5576 5573 5 EGGGAIEEEAK KKEPKEPREGGGAIEE GAIEEEAKEKTSEAPK R E G A K E 2 0 0 0 0 0 4 3 0 1 0 1 0 0 0 0 0 0 0 0 0 11 0 1088.4986 Q8TAQ2-2;F8VTJ5;Q8TAQ2;F8VXC8 Q8TAQ2-2 808 818 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 2 0.013986 60.167 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 2501400 303760 697310 1072400 0 82548 345440 1853 539 1876 8363;8364;8365;8366;8367 5577;5578 5577 2 EGGGAIEEEAKEK KKEPKEPREGGGAIEE IEEEAKEKTSEAPKKD R E G E K T 2 0 0 0 0 0 5 3 0 1 0 2 0 0 0 0 0 0 0 0 0 13 1 1345.6361 Q8TAQ2-2;F8VTJ5;Q8TAQ2;F8VXC8 Q8TAQ2-2 808 820 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 2;3 5.4941E-35 124.48 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 3 2 1 2 2 2 37135000 6083700 5918100 6345100 3638300 4984500 10166000 1854 539 1877 8368;8369;8370;8371;8372;8373;8374;8375;8376;8377;8378;8379 5579;5580;5581;5582;5583;5584;5585;5586 5586 8 EGGSDLGMSGNSEPKK KVKKVQQKEGGSDLGM SGNSEPKKCLRTRNVS K E G K K C 0 0 1 1 0 0 2 4 0 0 1 2 1 0 1 3 0 0 0 0 0 16 1 1591.7148 F5GXK1;P20585 F5GXK1 99 114 MSH3 DNA mismatch repair protein Msh3 yes no 3 0.0026067 50.024 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 3845900 0 210080 694210 662760 1313600 965190 1855 490 1878 8380;8381;8382;8383;8384 5587;5588 5588 2 EGHWDCSICLVR FALVTPKKEGHWDCSI DCSICLVRNEPTVSRC K E G V R N 0 1 0 1 2 0 1 1 1 1 1 0 0 0 0 1 0 1 0 1 0 12 0 1530.6708 P49792 P49792 1416 1427 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 3 0.00074902 92.943 By matching By MS/MS By matching By matching By matching By matching 1 6475600 0 6475600 0 0 0 0 1856 945 1879 8385 5589 5589 1 EGHWDCSICLVRNEPTVSR FALVTPKKEGHWDCSI RNEPTVSRCIACQNTK K E G S R C 0 2 1 1 2 0 2 1 1 1 1 0 0 0 1 2 1 1 0 2 0 19 1 2314.0583 P49792 P49792 1416 1434 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 4 0.0038887 47.904 By matching By matching By matching By MS/MS By matching By matching 1 4250900 0 0 0 4250900 0 0 1857 945 1880 8386 5590 5590 1 EGICALGGTSELSSEGTQHSYSEEEK FRKAINRKEGICALGG HSYSEEEKYAFVNWIN K E G E K Y 1 0 0 0 1 1 6 4 1 1 2 1 0 0 0 5 2 0 1 0 0 26 0 2784.2032 B7Z6M1;F8W8D8;B4DGB4;P13797 B7Z6M1 56 81 PLS3 Plastin-3 yes no 3 0.0018165 46.273 By matching By MS/MS By matching By matching By matching By matching 1 1 4515900 0 2608800 0 0 0 1907100 1858 87 1881 8387;8388 5591 5591 1 EGIDSECGPFIK TKNLLLAREGIDSECG SECGPFIKLSDPGIPI R E G I K L 0 0 0 1 1 0 2 2 0 2 0 1 0 1 1 1 0 0 0 0 0 12 0 1350.6126 P23458 P23458 725 736 JAK1 Tyrosine-protein kinase JAK1 yes yes 2 0.0061915 63.091 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2933900 0 910730 0 201910 0 1821300 1859 868 1882 8389;8390;8391 5592 5592 1 EGIQWEAK WSCPHCEKEGIQWEAK EGIQWEAKEDNSEGEE K E G A K E 1 0 0 0 0 1 2 1 0 1 0 1 0 0 0 0 0 1 0 0 0 8 0 959.47125 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 391 398 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 0.0073282 97.431 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 40713000 525310 11061000 10434000 358270 0 18334000 1860 486 1883 8392;8393;8394;8395;8396 5593;5594 5594 2 EGIVQTEQIR AARLEGHKEGIVQTEQ IVQTEQIRSLSEAMSV K E G I R S 0 1 0 0 0 2 2 1 0 2 0 0 0 0 0 0 1 0 0 1 0 10 0 1171.6197 B4DV47;Q6P1J9 B4DV47 162 171 CDC73 Parafibromin yes no 2 0.018778 64.64 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 3427700 439900 724830 0 0 764920 1498100 1861 131 1884 8397;8398;8399;8400 5595;5596 5596 2 EGLASATKDCSHREEK MAVTRSRKEGLASATK DCSHREEKVTAGWPSE K E G E K V 2 1 0 1 1 0 3 1 1 0 1 2 0 0 0 2 1 0 0 0 0 16 2 1816.8374 Q92766-3;Q92766;Q92766-2;Q92766-4 Q92766-3 1409 1424 RREB1 Ras-responsive element-binding protein 1 yes no 3;4 0.0059205 47.301 By matching By matching By matching By matching By matching By MS/MS 1 2 2 2 1 2 9721200 398960 2129100 2494500 1812800 525350 2360500 1862 1357 1885 8401;8402;8403;8404;8405;8406;8407;8408;8409;8410 5597;5598 5597 2 EGLLCQQQR PKLCPECREGLLCQQQ GLLCQQQRDLREYTQA R E G Q R D 0 1 0 0 1 3 1 1 0 0 2 0 0 0 0 0 0 0 0 0 0 9 0 1130.5502 Q86UV5;Q86UV5-2;B7ZKS7;Q86UV5-5 Q86UV5 846 854 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes no 2 1.8552E-07 118.5 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2524000 0 579480 0 0 0 1944500 1863 1264 1886 8411;8412 5599;5600 5599 2 EGLSRQHVLTR TFADGVPREGLSRQHV SRQHVLTRIGVMSLIR R E G T R I 0 2 0 0 0 1 1 1 1 0 2 0 0 0 0 1 1 0 0 1 0 11 1 1294.7106 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1459 1469 CHD4 Chromodomain-helicase-DNA-binding protein 4 no no 3 0.024678 53.237 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1952000 0 969620 0 0 160740 821690 1864 486 1887 8413;8414;8415 5601 5601 1 EGMEAAVEKQR SRRFRASKEGMEAAVE EAAVEKQRVREEILAK K E G Q R V 2 1 0 0 0 1 3 1 0 0 0 1 1 0 0 0 0 0 0 1 0 11 1 1246.5976 Q9H0D6-2;B4DZC3;Q9H0D6 Q9H0D6-2 48 58 XRN2 5-3 exoribonuclease 2 yes no 2;3 1.1298E-08 112.83 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 18511000 2197900 3474200 1527000 2007500 4498500 4806000 1865 146 1888 8416;8417;8418;8419;8420;8421;8422;8423;8424;8425;8426;8427;8428 5602;5603;5604;5605;5606;5607;5608;5609;5610;5611;5612;5613 5607 12 EGMEAAVEKQRVR SRRFRASKEGMEAAVE AVEKQRVREEILAKGG K E G V R E 2 2 0 0 0 1 3 1 0 0 0 1 1 0 0 0 0 0 0 2 0 13 2 1501.7671 Q9H0D6-2;B4DZC3;Q9H0D6 Q9H0D6-2 48 60 XRN2 5-3 exoribonuclease 2 yes no 3 0.010004 63.944 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 6621900 0 0 1292800 1014400 1892900 2421800 1866 146 1889 8429;8430;8431;8432 5614;5615 5614 2 EGMNIVEAMER HVVFGKVKEGMNIVEA NIVEAMERFGSRNGKT K E G E R F 1 1 1 0 0 0 3 1 0 1 0 0 2 0 0 0 0 0 0 1 0 11 0 1277.5744 P62937;B4DM82;Q567Q0 P62937 134 144 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 2 0.003415 82.705 By MS/MS By matching By matching By matching By matching By MS/MS 2 1 1 1 2 14495000 10857000 696530 805190 845430 0 1291000 1867 999 1890;1891 8433;8434;8435;8436;8437;8438;8439 5616;5617;5618 5618 117;118 3 EGPAHEPKFQYCVAVGAQTFPSVSAPSK CEFRLLSKEGPAHEPK PSVSAPSKKVAKQMAA K E G S K K 4 0 0 0 1 2 2 2 1 0 0 2 0 2 4 3 1 0 1 3 0 28 1 2988.444 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 638 665 ADAR Double-stranded RNA-specific adenosine deaminase no no 4 1.3845E-207 146.15 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 203700000 0 78117000 60740000 64839000 0 0 1868 352;968 1892 8440;8441;8442 5619;5620;5621;5622 5620 4 EGPAHEPKFQYCVAVGAQTFPSVSAPSKK CEFRLLSKEGPAHEPK SVSAPSKKVAKQMAAE K E G K K V 4 0 0 0 1 2 2 2 1 0 0 3 0 2 4 3 1 0 1 3 0 29 2 3116.539 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 638 666 ADAR Double-stranded RNA-specific adenosine deaminase no no 4;5 7.8687E-63 103.33 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 2 2 2 1 229080000 25065000 33747000 83073000 78031000 9165000 0 1869 352;968 1893 8443;8444;8445;8446;8447;8448;8449;8450 5623;5624;5625;5626;5627;5628;5629;5630 5627 8 EGPSGSGDSQLSASSR AEEDSQGKEGPSGSGD SQLSASSRSESGRMKK K E G S R S 1 1 0 1 0 1 1 3 0 0 1 0 0 0 1 6 0 0 0 0 0 16 0 1520.6703 Q12789-3;Q12789;H7BYG6 Q12789-3 743 758 GTF3C1 General transcription factor 3C polypeptide 1 yes no 2 0.0052794 49.537 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 22376000 1885800 3832400 3078500 910810 2477000 10191000 1870 1059 1894 8451;8452;8453;8454;8455;8456 5631;5632 5632 2 EGPSLGPPPVASALSR PKRELQEREGPSLGPP PVASALSRADREKAKV R E G S R A 2 1 0 0 0 0 1 2 0 0 2 0 0 0 4 3 0 0 0 1 0 16 0 1533.8151 O75150-4;H3BP71;O75150;F8W8Z4;O75150-3 O75150-4 518 533 RNF40 E3 ubiquitin-protein ligase BRE1B yes no 2 0.00074961 70.451 By MS/MS By matching By matching By matching By matching By matching 1 8839800 8839800 0 0 0 0 0 1871 634 1895 8457 5633 5633 1 EGQEILGPEAQADEAGCTVK NPRRNNGKEGQEILGP DEAGCTVKDDECESDA K E G V K D 3 0 0 1 1 2 4 3 0 1 1 1 0 0 1 0 1 0 0 1 0 20 0 2100.9634 F5H4I8;E9PCM7;F5H2R1;P37275;Q2KJ05;F5H1R1;H0YMN2;F6TDF5 F5H4I8 22 41 ZEB1 Zinc finger E-box-binding homeobox 1 yes no 2 0.0049652 45.659 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 8620700 4171200 1167100 1710300 491270 445240 635720 1872 415 1896 8458;8459;8460;8461;8462;8463 5634;5635 5635 2 EGQESSSSAANTNPAVAPPCVVVEEKKPQLTQEELEAK SDDDEESKEGQESSSS TQEELEAKQAKQKLED K E G A K Q 5 0 2 0 1 3 7 1 0 0 2 3 0 0 4 4 2 0 0 4 0 38 2 4050.9692 Q12872;F5H6B8;F5H5X1 Q12872 612 649 SFSWAP Splicing factor, suppressor of white-apricot homolog yes no 4 1.1615E-55 81.735 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 44589000 0 14929000 18602000 8944200 2114100 0 1873 522 1897 8464;8465;8466;8467 5636;5637;5638 5638 3 EGQWDCSACLVQNEGSSTK FRSVFSTKEGQWDCSA QNEGSSTKCAACQNPR K E G T K C 1 0 1 1 2 2 2 2 0 0 1 1 0 0 0 3 1 1 0 1 0 19 0 2154.8946 P49792 P49792 1480 1498 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 2 6.0574E-171 150.91 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 35868000 15728000 4908900 7651800 0 4741700 2837900 1874 945 1898 8468;8469;8470;8471;8472 5639;5640;5641;5642;5643;5644 5644 6 EGQWDCSVCLVR FEGMFTKKEGQWDCSV DCSVCLVRNEASATKC K E G V R N 0 1 0 1 2 1 1 1 0 0 1 0 0 0 0 1 0 1 0 2 0 12 0 1507.6548 P49792 P49792 1607 1618 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 2 0.020977 62.088 By matching By MS/MS By matching By matching By matching By matching 1 2123700 0 2123700 0 0 0 0 1875 945 1899 8473 5645 5645 0 EGQWDCSVCLVRNEASATK FEGMFTKKEGQWDCSV RNEASATKCIACQNPG K E G T K C 2 1 1 1 2 1 2 1 0 0 1 1 0 0 0 2 1 1 0 2 0 19 1 2208.9892 P49792 P49792 1607 1625 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 3 0.00032203 72.207 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 13929000 6774100 0 0 7154600 0 0 1876 945 1900 8474;8475 5646;5647 5647 2 EGREQGTGNSYTDTSGPK PSSQGYKKEGREQGTG YTDTSGPKETSSATPG K E G P K E 0 1 1 1 0 1 2 4 0 0 0 1 0 0 1 2 3 0 1 0 0 18 1 1882.8293 Q9UHB7;Q9UHB7-2 Q9UHB7 505 522 AFF4 AF4/FMR2 family member 4 yes no 3 0.0040062 48.555 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 6668800 1147300 936730 716010 664240 1447800 1756700 1877 1592 1901 8476;8477;8478;8479;8480;8481 5648;5649;5650;5651 5649 4 EGRNVYSSSRYDDYDR TPNQMKAKEGRNVYSS SRYDDYDRYRRSRSRS K E G D R Y 0 3 1 3 0 0 1 1 0 0 0 0 0 0 0 3 0 0 3 1 0 16 2 1980.8562 O75494-5;Q5JRI1;O75494-4;Q5JRI3;O75494-3;O75494-2;O75494 O75494-5 100 115 SRSF10 Serine/arginine-rich splicing factor 10 yes no 4 0.0022206 56.872 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 26519000 915890 4057400 3347300 1177000 5087400 11934000 1878 743 1902 8482;8483;8484;8485;8486;8487 5652;5653 5652 2 EGRPSGEAFVELESEDEVK GIRFIYTREGRPSGEA LESEDEVKLALKKDRE R E G V K L 1 1 0 1 0 0 6 2 0 0 1 1 0 1 1 2 0 0 0 2 0 19 1 2105.9753 D6RBM0;E9PCY7;P31943;G8JLB6;D6RIU0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E7EQJ0;E7EN40;D6RDL0 D6RBM0 50 68 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 3 5.8403E-229 162.82 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 481640000 51109000 204250000 54889000 56909000 38337000 76147000 1879 322 1903 8488;8489;8490;8491;8492;8493 5654;5655;5656;5657;5658;5659 5658 6 EGRPSGEAFVELESEEEVK GIRFIYTREGRPSGEA LESEEEVKLALKKDRE R E G V K L 1 1 0 0 0 0 7 2 0 0 1 1 0 1 1 2 0 0 0 2 0 19 1 2119.991 P55795;B4DFK9 P55795 50 68 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H2, N-terminally processed yes no 3 0.00017198 81.788 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 15342000 0 7790400 7551800 0 0 0 1880 970 1904 8494;8495 5660;5661 5661 2 EGRQSGEAFVELGSEDDVK GVHFIYTREGRQSGEA LGSEDDVKMALKKDRE R E G V K M 1 1 0 2 0 1 4 3 0 0 1 1 0 1 0 2 0 0 0 2 0 19 1 2050.9443 P52597 P52597 50 68 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 3 0.014848 48.196 By matching By MS/MS By matching By matching By matching By matching 1 2224800 0 2224800 0 0 0 0 1881 958 1905 8496 5662 5662 0 EGRYTVLAENK KFIQKAMKEGRYTVLA YTVLAENKSDEKKKSG K E G N K S 1 1 1 0 0 0 2 1 0 0 1 1 0 0 0 0 1 0 1 1 0 11 1 1278.6568 Q12872;F5H6B8;F5H5X1;F5H525 Q12872 262 272 SFSWAP Splicing factor, suppressor of white-apricot homolog yes no 3 0.0085261 67.214 By matching By matching By matching By matching By matching By MS/MS 1 1 2830200 0 0 0 321840 0 2508300 1882 522 1906 8497;8498 5663 5663 1 EGRYTVLAENKSDEK KFIQKAMKEGRYTVLA AENKSDEKKKSGVSSD K E G E K K 1 1 1 1 0 0 3 1 0 0 1 2 0 0 0 1 1 0 1 1 0 15 2 1737.8533 Q12872;F5H6B8;F5H5X1;F5H525 Q12872 262 276 SFSWAP Splicing factor, suppressor of white-apricot homolog yes no 3;4 0.0019882 66.784 By matching By matching By MS/MS By matching By MS/MS By MS/MS 2 2 1 1 2 6736300 0 1699700 1961200 509050 743290 1823100 1883 522 1907 8499;8500;8501;8502;8503;8504;8505;8506 5664;5665;5666;5667 5664 4 EGSDGPLATSKPVPAEK SKKKGAKKEGSDGPLA SKPVPAEKSGLPVGPE K E G E K S 2 0 0 1 0 0 2 2 0 0 1 2 0 0 3 2 1 0 0 1 0 17 1 1681.8523 E9PJS4;P08240 E9PJS4 147 163 SRPR Signal recognition particle receptor subunit alpha yes no 3 0.0021116 78.69 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1965000 0 768250 497940 698760 0 0 1884 449 1908 8507;8508;8509 5668 5668 1 EGVQWEAK WSCPHCEKEGVQWEAK EGVQWEAKEEEEEYEE K E G A K E 1 0 0 0 0 1 2 1 0 0 0 1 0 0 0 0 0 1 0 1 0 8 0 945.4556 Q12873;E9PG89;Q12873-2;H7C2H0 Q12873 426 433 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 2 0.0017556 98.629 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 11331000 0 2497500 4005400 0 0 4827900 1885 430 1909 8510;8511;8512 5669;5670 5670 1 EHALLAYTLGVK ISKNGQTREHALLAYT LAYTLGVKQLIVGVNK R E H V K Q 2 0 0 0 0 0 1 1 1 0 3 1 0 0 0 0 1 0 1 1 0 12 0 1313.7343 Q5VTE0;P68104;F8W6I0;Q05639 Q5VTE0 135 146 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2;3 0 179.94 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 266030000 0 8185500 0 0 2210000 255640000 1886 1006 1910 8513;8514;8515;8516;8517 5671;5672;5673;5674;5675 5672 5 EHASGSGAQSEAAGRTEPTGPK EQLAKKEKEHASGSGA RTEPTGPKLEALRAEV K E H P K L 4 1 0 0 0 1 3 4 1 0 0 1 0 0 2 3 2 0 0 0 0 22 1 2123.9832 Q14980-2;Q14980;F5H2L0 Q14980-2 1100 1121 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3;4 3.1285E-06 75.215 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 30746000 3616700 6927500 4252500 2990400 4774700 8184700 1887 1121 1911 8518;8519;8520;8521;8522;8523;8524;8525;8526;8527;8528;8529 5676;5677;5678;5679;5680;5681;5682;5683;5684;5685 5681 10 EHHFGSSGMTLHER VTIVHHVKEHHFGSSG SGMTLHERFTKYLKRG K E H E R F 0 1 0 0 0 0 2 2 3 0 1 0 1 1 0 2 1 0 0 0 0 14 0 1623.7212 Q9Y2W1 Q9Y2W1 640 653 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 4 0.025213 40.983 By matching By matching By matching By matching By matching By MS/MS 1 1 2906000 0 0 0 0 722330 2183700 1888 1639 1912 8530;8531 5686 5686 1 EHLELLK SSLKAVAREHLELLKH REHLELLKHMHTVGEK R E H L K H 0 0 0 0 0 0 2 0 1 0 3 1 0 0 0 0 0 0 0 0 0 7 0 880.50182 C9JZ40;Q7Z2E3-4;Q7Z2E3-5;Q7Z2E3-9;Q7Z2E3-10;Q7Z2E3-11;Q7Z2E3-7;Q7Z2E3;Q7Z2E3-6;Q7Z2E3-2;F8W6G5;Q7Z2E3-3;Q7Z2E3-8;H7BXV7 C9JZ40 179 185 APTX Aprataxin yes no 2 1.198E-07 116.54 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 0 0 0 0 0 0 0 1889 274 1913 8532;8533 5687;5688 5688 2 EHLHTDILK KVEVVERKEHLHTDIL HLHTDILKRGSEMDNN K E H L K R 0 0 0 1 0 0 1 0 2 1 2 1 0 0 0 0 1 0 0 0 0 9 0 1104.5928 O95243-2 O95243-2 369 377 MBD4 Methyl-CpG-binding domain protein 4 no no 2 1.6176E-29 134.77 By matching By matching By matching By matching By matching By MS/MS 1 1 1035500 0 0 0 0 269100 766360 1890 769 1914 8534;8535 5689;5690 5690 2 EHLLQSNIGTGEK VVRKLEEKEHLLQSNI SNIGTGEKELGLRTQA K E H E K E 0 0 1 0 0 1 2 2 1 1 2 1 0 0 0 1 1 0 0 0 0 13 0 1424.726 Q5VTR2 Q5VTR2 809 821 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 3 0.0013991 80.905 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 7993600 0 1875200 1566800 0 727930 3823600 1891 1204 1915 8536;8537;8538;8539 5691;5692;5693 5692 3 EHLTEQINVEEK LPGLSHNKEHLTEQIN EQINVEEKLCSAEKNS K E H E K L 0 0 1 0 0 1 4 0 1 1 1 1 0 0 0 0 1 0 0 1 0 12 0 1467.7205 Q92576-2;Q92576 Q92576-2 1601 1612 PHF3 PHD finger protein 3 yes no 2;3 0 231.67 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 58066000 5023100 13546000 8989600 7201600 8931600 14374000 1892 1353 1916 8540;8541;8542;8543;8544;8545;8546;8547;8548;8549;8550;8551 5694;5695;5696;5697;5698;5699;5700;5701;5702;5703;5704;5705;5706 5697 13 EHMVLAPR KFAPFEIKEHMVLAPR EHMVLAPRRRTAFHPD K E H P R R 1 1 0 0 0 0 1 0 1 0 1 0 1 0 1 0 0 0 0 1 0 8 0 951.49602 Q13111-2;C9JLF8;Q13111-3;Q13111 Q13111-2 475 482 CHAF1A Chromatin assembly factor 1 subunit A yes no 2 0.009371 101.33 By matching By matching By matching By matching By matching By MS/MS 1 771140 0 0 0 0 0 771140 1893 258 1917 8552 5707;5708 5707 2 EHQEMDEGSQSLEK FFLNSPEKEHQEMDEG EGSQSLEKLDVSKGNS K E H E K L 0 0 0 1 0 2 4 1 1 0 1 1 1 0 0 2 0 0 0 0 0 14 0 1645.689 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 1287 1300 AHCTF1 Protein ELYS yes no 3 0.00017299 88.78 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2 3971100 0 674770 617160 428630 881280 1369300 1894 1345 1918 8553;8554;8555;8556;8557;8558 5709;5710;5711;5712 5710 4 EHSLQVSPSLEK PSLHSFIKEHSLQVSP QVSPSLEKGAKADTGL K E H E K G 0 0 0 0 0 1 2 0 1 0 2 1 0 0 1 3 0 0 0 1 0 12 0 1352.6936 O95235;B4DL79 O95235 526 537 KIF20A Kinesin-like protein KIF20A yes no 3 0.0016352 89.356 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 7239900 413450 706750 1011200 611610 1769400 2727500 1895 767 1919 8559;8560;8561;8562;8563;8564 5713;5714 5713 2 EIECSIAGAHEK ENYEKIYKEIECSIAG SIAGAHEKIAECKKQI K E I E K I 2 0 0 0 1 0 3 1 1 2 0 1 0 0 0 1 0 0 0 0 0 12 0 1342.6187 Q6I9Y2 Q6I9Y2 87 98 THOC7 THO complex subunit 7 homolog yes yes 2;3 0.018667 52.576 By matching By matching By matching By matching By MS/MS By MS/MS 1 2 2 6464200 0 959570 0 0 2286400 3218200 1896 1221 1920 8565;8566;8567;8568;8569 5715;5716 5715 2 EIEEESETTVEADLTDKQK MLADKHAKEIEEESET ADLTDKQKHQLKHREL K E I Q K H 1 0 0 2 0 1 6 0 0 1 1 2 0 0 0 1 3 0 0 1 0 19 1 2193.0172 E7EQY4;Q9BTC8-2;D6W5A2;F8W8M8;E7EV10;Q9BTC8;E9PCS8 E7EQY4 65 83 MTA3 Metastasis-associated protein MTA3 yes no 3 0.0012841 57.708 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 14501000 0 1475100 12356000 0 0 669340 1897 331 1921 8570;8571;8572 5717;5718 5717 2 EIEKVILTR MFHWCAPKEIEKVILT IEKVILTRSEAAMTVL K E I T R S 0 1 0 0 0 0 2 0 0 2 1 1 0 0 0 0 1 0 0 1 0 9 1 1099.6601 H0Y5Z6;C9JFZ9;Q5SVK0;H0Y382;Q5SVK5;Q12791-5;H0Y379;Q5SVJ7;Q12791-4;Q5SVJ9;Q5SVK3;Q5SVJ8;Q12791;Q12791-7;F8WA96;Q12791-3 H0Y5Z6 472 480 KCNMA1 Calcium-activated potassium channel subunit alpha-1 yes no 2 0.00054632 112.11 By matching By matching By matching By matching By MS/MS By matching 1 25293000000 0 0 0 0 25293000000 0 1898 244 1922 8573 5719 5719 1 EIEMSVDDDDINSSK EQKIEVIREIEMSVDD DDDINSSKVINDLFSD R E I S K V 0 0 1 4 0 0 2 0 0 2 0 1 1 0 0 3 0 0 0 1 0 15 0 1695.7145 Q9NQW6;Q9NQW6-2 Q9NQW6 549 563 ANLN Actin-binding protein anillin yes no 2 0.0030376 57.788 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2252500 0 998200 0 0 0 1254300 1899 1533 1923 8574;8575 5720;5721;5722 5721 3 EIENGHIFTVNDQFTSK LTKEPKSKEIENGHIF VNDQFTSKLHRVKIQT K E I S K L 0 0 2 1 0 1 2 1 1 2 0 1 0 2 0 1 2 0 0 1 0 17 0 1977.9432 Q13618-3;Q13618-2;Q13618 Q13618-3 586 602 CUL3 Cullin-3 yes no 3 0.0048804 46.543 By matching By MS/MS By matching By matching By matching By matching 1 11944000 0 11944000 0 0 0 0 1900 1088 1924 8576 5723 5723 1 EIERPFETYK QRREGEMKEIERPFET ERPFETYKENIELKEN K E I Y K E 0 1 0 0 0 0 3 0 0 1 0 1 0 1 1 0 1 0 1 0 0 10 1 1310.6507 P46013;F5H4V4;P46013-2 P46013 924 933 MKI67 Antigen KI-67 no no 2;3 0.016145 75.566 By matching By MS/MS By MS/MS By matching By MS/MS By matching 2 2 2 2 2 1 41916000 6197600 10884000 5050000 2317400 7274300 10192000 1901 919;920 1925 8577;8578;8579;8580;8581;8582;8583;8584;8585;8586;8587 5724;5725;5726;5727 5726 4 EIETYHNLLEGGQEDFESSGAGK SIKMRLEKEIETYHNL FESSGAGKIGLGGRGG K E I G K I 1 0 1 1 0 1 5 4 1 1 2 1 0 1 0 2 1 0 1 0 0 23 0 2509.1245 P35527;CON__P35527 P35527 450 472 KRT9 Keratin, type I cytoskeletal 9 yes no 3 0 178.45 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 73686000 0 61268000 0 12417000 0 0 + 1902 899 1926 8588;8589 5728;5729 5728 2 EIIKQEENVDPDYWEK DKIEEIEREIIKQEEN VDPDYWEKLLRHHYEQ R E I E K L 0 0 1 2 0 1 4 0 0 2 0 2 0 0 1 0 0 1 1 1 0 16 1 2033.9582 Q12873;E9PG89;Q12873-2 Q12873 1305 1320 CHD3 Chromodomain-helicase-DNA-binding protein 3 no no 2;3 2.1903E-249 176.42 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 34264000 0 12485000 0 0 0 21779000 1903 430 1927 8590;8591;8592 5730;5731;5732 5730 3 EIIKQEESVDPDYWEK GEEEEVEREIIKQEES VDPDYWEKLLRHHYEQ R E I E K L 0 0 0 2 0 1 4 0 0 2 0 2 0 0 1 1 0 1 1 1 0 16 1 2006.9473 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1275 1290 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 1.325E-218 170.78 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 59064000 0 31727000 0 0 0 27336000 1904 486 1928 8593;8594 5733;5734;5735 5735 3 EIISKEQGNVK LDEITSEKEIISKEQG SKEQGNVKAAGASDVV K E I V K A 0 0 1 0 0 1 2 1 0 2 0 2 0 0 0 1 0 0 0 1 0 11 1 1243.6772 Q9NSD9 Q9NSD9 43 53 FARSB Phenylalanine--tRNA ligase beta subunit yes yes 3 0.0029339 85.355 By matching By MS/MS By matching By matching By matching By matching 1 1 832840 0 440730 392110 0 0 0 1905 1543 1929 8595;8596 5736 5736 1 EIKVKVDNISESTDK EVTDGENKEIKVKVDN NISESTDKSAEIETSV K E I D K S 0 0 1 2 0 0 2 0 0 2 0 3 0 0 0 2 1 0 0 2 0 15 2 1703.8941 Q92576-2;Q92576;E7ER40 Q92576-2 1434 1448 PHF3 PHD finger protein 3 yes no 3 0.00018515 88.78 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 1 25909000 4629900 5312500 6234000 3193200 2178100 4360900 1906 1353 1930 8597;8598;8599;8600;8601;8602 5737;5738 5738 2 EILKEADTDVQVCPNYSIPQK ASTAKPPKEILKEADT PNYSIPQKTDSYFNPK K E I Q K T 1 0 1 2 1 2 2 0 0 2 1 2 0 0 2 1 1 0 1 2 0 21 1 2446.205 Q7Z2T5;Q7Z2T5-2 Q7Z2T5 227 247 TRMT1L TRMT1-like protein yes no 3 1.9157E-09 86.258 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 9084900 0 2154000 0 0 0 6930900 1907 1248 1931 8603;8604 5739;5740 5740 2 EILQDKDGLNQR DVALTMPREILQDKDG DKDGLNQRYFRKRALY R E I Q R Y 0 1 1 2 0 2 1 1 0 1 2 1 0 0 0 0 0 0 0 0 0 12 1 1427.7369 Q9H6R4-4;Q9H6R4;Q9H6R4-2;G8JLK7;Q9H6R4-3 Q9H6R4-4 187 198 NOL6 Nucleolar protein 6 yes no 3 0.025076 49.934 By matching By matching By matching By matching By matching By MS/MS 1 1 1737600 0 0 0 555880 0 1181700 1908 1497 1932 8605;8606 5741 5741 1 EILTQGQINSTSGLNK AGLTRISKEILTQGQI NSTSGLNKESFRYLKD K E I N K E 0 0 2 0 0 2 1 2 0 2 2 1 0 0 0 2 2 0 0 0 0 16 0 1701.8897 Q5VWQ0;H0YDA9;Q5VWQ0-4 Q5VWQ0 291 306 RSBN1 Round spermatid basic protein 1 yes no 2 1.8877E-18 105.39 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 7316800 753080 1835800 0 0 1331700 3396300 1909 1209 1933 8607;8608;8609;8610 5742;5743;5744 5742 3 EILVGDVGQTVDDPYATFVK NIILEEGKEILVGDVG DPYATFVKMLPDKDCR K E I V K M 1 0 0 3 0 1 1 2 0 1 1 1 0 1 1 0 2 0 1 4 0 20 0 2165.0892 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 54 73 CFL1 Cofilin-1 yes no 2 1.7053E-178 145.71 By matching By matching By matching By MS/MS By matching By matching 1 0 0 0 0 0 0 0 1910 461 1934 8611 5745 5745 1 EINSDQATQGNISSDR NIDPVKNKEINSDQAT QGNISSDRGKKRTVTA K E I D R G 1 1 2 2 0 2 1 1 0 2 0 0 0 0 0 3 1 0 0 0 0 16 0 1733.7816 Q29RF7 Q29RF7 1220 1235 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 0.0029237 55.097 By matching By matching By matching By matching By matching By MS/MS 1 1 741850 0 0 0 0 198830 543030 1911 1159 1935 8612;8613 5746 5746 1 EINSDQATQGNISSDRGK NIDPVKNKEINSDQAT NISSDRGKKRTVTAAG K E I G K K 1 1 2 2 0 2 1 2 0 2 0 1 0 0 0 3 1 0 0 0 0 18 1 1918.8981 Q29RF7 Q29RF7 1220 1237 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 3 0.0017452 65.652 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 6956600 0 1344000 1086100 582170 1763500 2180900 1912 1159 1936 8614;8615;8616;8617;8618 5747;5748;5749;5750 5750 4 EINSDQATQGNISSDRGKK NIDPVKNKEINSDQAT ISSDRGKKRTVTAAGA K E I K K R 1 1 2 2 0 2 1 2 0 2 0 2 0 0 0 3 1 0 0 0 0 19 2 2046.993 Q29RF7 Q29RF7 1220 1238 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 4 0.00063292 63.374 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 7134000 734790 1220000 1084800 1097300 1004900 1992200 1913 1159 1937 8619;8620;8621;8622;8623;8624 5751;5752;5753;5754 5752 4 EIPSATQSPISK KLEKKDAKEIPSATQS ATQSPISKKRKKKGFL K E I S K K 1 0 0 0 0 1 1 0 0 2 0 1 0 0 2 3 1 0 0 0 0 12 0 1256.6612 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 1076 1087 MYBBP1A Myb-binding protein 1A yes no 2 3.4903E-12 110.64 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 186630000 26931000 23574000 19251000 17633000 53282000 45963000 1914 682 1938 8625;8626;8627;8628;8629;8630;8631 5755;5756;5757;5758;5759;5760;5761;5762 5757 8 EIPSATQSPISKK KLEKKDAKEIPSATQS TQSPISKKRKKKGFLP K E I K K R 1 0 0 0 0 1 1 0 0 2 0 2 0 0 2 3 1 0 0 0 0 13 1 1384.7562 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 1076 1088 MYBBP1A Myb-binding protein 1A yes no 2;3 2.9659E-16 112.02 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 1 2 1 33283000 7481200 4684100 4405900 2763300 8950600 4998200 1915 682 1939 8632;8633;8634;8635;8636;8637;8638;8639;8640;8641;8642 5763;5764;5765;5766;5767;5768;5769 5766 5 EIPVTVVQETQK HLRVPLEKEIPVTVVQ TVVQETQKKGHKLTDS K E I Q K K 0 0 0 0 0 2 2 0 0 1 0 1 0 0 1 0 2 0 0 3 0 12 0 1369.7453 Q9P0U3;Q9P0U3-2 Q9P0U3 397 408 SENP1 Sentrin-specific protease 1 yes no 2 0.034746 46.069 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 38414000 0 3983400 8222200 6600500 6885300 12723000 1916 1573 1940 8643;8644;8645;8646;8647 5770;5771;5772 5770 3 EIPVTVVQETQKK HLRVPLEKEIPVTVVQ VVQETQKKGHKLTDSE K E I K K G 0 0 0 0 0 2 2 0 0 1 0 2 0 0 1 0 2 0 0 3 0 13 1 1497.8403 Q9P0U3;Q9P0U3-2 Q9P0U3 397 409 SENP1 Sentrin-specific protease 1 yes no 3 0.0064815 53.136 By matching By matching By matching By matching By matching By MS/MS 1 1936000 0 0 0 0 0 1936000 1917 1573 1941 8648 5773 5773 1 EIQEPDPTYEEK DASPGKQKEIQEPDPT PDPTYEEKMQTDRANR K E I E K M 0 0 0 1 0 1 4 0 0 1 0 1 0 0 2 0 1 0 1 0 0 12 0 1476.662 F5GZI1;O60264 F5GZI1 15 26 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 2 2.2944E-37 127.52 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 20465000 3154400 3229100 2285700 1556600 3489200 6750400 1918 500 1942 8649;8650;8651;8652;8653;8654 5774;5775;5776;5777;5778 5775 5 EIQLTPQIAK RKWRQLTKEIQLTPQI QLTPQIAKTYRCGMKP K E I A K T 1 0 0 0 0 2 1 0 0 2 1 1 0 0 1 0 1 0 0 0 0 10 0 1139.655 Q8NB78-2;F2Z2A7;Q8NB78 Q8NB78-2 156 165 KDM1B Lysine-specific histone demethylase 1B yes no 2 0.0095431 75.652 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 4171500 0 1335900 0 0 0 2835500 1919 473 1943 8655;8656 5779;5780 5779 2 EIRESTGAQVQVAGDMLPNSTER GKGGCKIKEIRESTGA MLPNSTERAITIAGVP K E I E R A 2 2 1 1 0 2 3 2 0 1 1 0 1 0 1 2 2 0 0 2 0 23 1 2487.2024 F8VZX2;Q15366-4;Q15366-5;Q15366-3;Q15366;Q15366-2;H3BRU6;G3V0E8;B4DXP5;B4DRD7;F8W0G4;B4DLC0;F8VRG9;F8VXH9;F8VWQ4;P57721-2;P57721-3;P57721-5;E9PFP8;P57721-4;P57721;H9KV40;Q15365 Q15365 122 144 PCBP2;PCBP3;PCBP1 Poly(rC)-binding protein 2;Poly(rC)-binding protein 3;Poly(rC)-binding protein 1 no no 3 5.1045E-147 138.25 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 59695000 0 16149000 1340600 5424900 1782300 34999000 1920 1135;548 1944;1945 8657;8658;8659;8660;8661;8662;8663 5781;5782;5783;5784;5785;5786 5782 62 6 EIRNPDSLKELTHLK IEWLKGQKEIRNPDSL LKELTHLKEYWNDPEL K E I L K E 0 1 1 1 0 0 2 0 1 1 3 2 0 0 1 1 1 0 0 0 0 15 2 1791.9843 Q8N9T8;D3YTE0;Q8N9T8-2;F5H196;H0YFD2 Q8N9T8 217 231 KRI1 Protein KRI1 homolog yes no 4 0.0019882 66.784 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 9389500 0 1014600 3024900 0 2653400 2696600 1921 1312 1946 8664;8665;8666;8667 5787;5788;5789 5789 3 EIRQQLAEKAK QHLTKEEREIRQQLAE QQLAEKAKAGELKVVN R E I A K A 2 1 0 0 0 2 2 0 0 1 1 2 0 0 0 0 0 0 0 0 0 11 2 1312.7463 O75533 O75533 167 177 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.027267 66.663 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 6651800 0 1950100 1046700 526980 1009000 2119000 1922 746 1947 8668;8669;8670;8671;8672 5790;5791 5791 2 EISEASENIYSDVR RKKTRKAKEISEASEN ENIYSDVRGLSQNQQI K E I V R G 1 1 1 1 0 0 3 0 0 2 0 0 0 0 0 3 0 0 1 1 0 14 0 1610.7424 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 1781 1794 AHCTF1 Protein ELYS yes no 2 0.00083393 72.209 By matching By matching By matching By matching By matching By MS/MS 1 723550 0 0 0 0 0 723550 1923 1345 1948 8673 5792 5792 0 EISNSDGTRPVGMLGK YYTQNMEREISNSDGT RPVGMLGKATSTSDML R E I G K A 0 1 1 1 0 0 1 3 0 1 1 1 1 0 1 2 1 0 0 1 0 16 1 1659.825 E5RJW4;Q9NW64;Q9NW64-2;F5GWK3 E5RJW4 117 132 RBM22 Pre-mRNA-splicing factor RBM22 yes no 2;3 0.00087873 78.401 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 2 1 2 2 2 27188000 4508600 3090800 3247100 2521300 4743000 9077400 1924 345 1949 8674;8675;8676;8677;8678;8679;8680;8681;8682;8683 5793;5794;5795;5796 5795 4 EISSSQWEK AMQTVYLREISSSQWE ISSSQWEKLQKDDTDP R E I E K L 0 0 0 0 0 1 2 0 0 1 0 1 0 0 0 3 0 1 0 0 0 9 0 1092.5088 O43913;B4DXT8;O43913-2 O43913 272 280 ORC5 Origin recognition complex subunit 5 yes no 2 0.018678 70.552 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 14448000 1062400 2380800 0 1187700 3540200 6277300 1925 724 1950 8684;8685;8686;8687;8688 5797 5797 1 EITALAPSTMK GIADRMQKEITALAPS ALAPSTMKIKIIAPPE K E I M K I 2 0 0 0 0 0 1 0 0 1 1 1 1 0 1 1 2 0 0 0 0 11 0 1160.6111 F5H0N0;B4E335;P63261;P60709;I3L3I4;E7EQV5;Q5T8M8;A6NL76;B4DW52;P68133;P68032;Q5T8M7;F5H1C1;P63267;P62736;F5GYT4;E9PG30;B4DUI8 F5H0N0 274 284 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle yes no 2 1.116E-41 132.17 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 93246000 0 12503000 13090000 8031100 19042000 40579000 1926 164 1951 8689;8690;8691;8692;8693 5798;5799;5800 5798 3 EITALAPSTMKIK GIADRMQKEITALAPS APSTMKIKIIAPPERK K E I I K I 2 0 0 0 0 0 1 0 0 2 1 2 1 0 1 1 2 0 0 0 0 13 1 1401.7901 F5H0N0;B4E335;P63261;P60709;I3L3I4;E7EQV5;Q5T8M8;A6NL76;B4DW52;P68133;P68032;Q5T8M7;F5H1C1;P63267;P62736;F5GYT4;E9PG30;B4DUI8 F5H0N0 274 286 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle yes no 3 0.0016171 80.318 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 9134900 0 0 6524300 0 2610600 0 1927 164 1952 8694;8695 5801;5802;5803 5801 3 EIVETFANK RGKQDFLKEIVETFAN IVETFANKSGQSALYD K E I N K S 1 0 1 0 0 0 2 0 0 1 0 1 0 1 0 0 1 0 0 1 0 9 0 1049.5393 P49792;E9PGT0 P49792 371 379 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 2 0.025927 66.568 By matching By matching By matching By matching By matching By MS/MS 1 1920300 0 0 0 0 0 1920300 1928 945 1953 8696 5804 5804 1 EKFLVTPQDYAR NKAEVQMKEKFLVTPQ VTPQDYARFKKSMVKG K E K A R F 1 1 0 1 0 1 1 0 0 0 1 1 0 1 1 0 1 0 1 1 0 12 1 1465.7565 Q86UT8;E9PJ16;E9PPT8 Q86UT8 117 128 CCDC84 Coiled-coil domain-containing protein 84 yes no 3 0.013198 56.551 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1819400 0 649050 0 0 0 1170300 1929 1263 1954 8697;8698 5805;5806 5806 2 EKGSRVFCVEEEDSESSLQK LEKTNLEKEKGSRVFC DSESSLQKRRRKKKKK K E K Q K R 0 1 0 1 1 1 5 1 0 0 1 2 0 1 0 4 0 0 0 2 0 20 2 2342.0696 Q14684-2;Q14684 Q14684-2 361 380 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 4 9.0312E-05 71.637 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 5322000 0 1942600 1728500 1093200 557730 0 1930 1111 1955 8699;8700;8701;8702 5807;5808 5808 2 EKPLEEPDAQGR ERFDVGPKEKPLEEPD EEPDAQGRASEDRRRE K E K G R A 1 1 0 1 0 1 3 1 0 0 1 1 0 0 2 0 0 0 0 0 0 12 1 1367.6681 Q9BTC0 Q9BTC0 2097 2108 DIDO1 Death-inducer obliterator 1 yes yes 3 0.0035364 69.846 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 3278900 530980 813230 170530 0 0 1764200 1931 1447 1956 8703;8704;8705;8706 5809 5809 1 EKSDDILEEGEK VVVDSKEKEKSDDILE DILEEGEKNLGNIKVT K E K E K N 0 0 0 2 0 0 4 1 0 1 1 2 0 0 0 1 0 0 0 0 0 12 1 1390.6464 Q7Z2T5;Q7Z2T5-2 Q7Z2T5 335 346 TRMT1L TRMT1-like protein yes no 2;3 0.0047016 81.239 By matching By matching By matching By matching By matching By MS/MS 2 1 2 5933700 0 1755500 0 0 963200 3215000 1932 1248 1957 8707;8708;8709;8710;8711 5810;5811 5811 2 EKTPDLHYELK E K L K 0 0 0 1 0 0 2 0 1 0 2 2 0 0 1 0 1 0 1 0 0 11 1 1371.7034 REV__Q9Y4I1-2 yes no 2 0.017397 69.672 By matching By matching By MS/MS By matching By matching By matching 1 2 1 1 1 77300000 0 11384000 51334000 9130900 4612400 839470 + 1933 1673 1958 8712;8713;8714;8715;8716;8717 5812 5812 1 ELAAGTESQALVSATPR VLDPPWDKELAAGTES ALVSATPREDFRVRCT K E L P R E 4 1 0 0 0 1 2 1 0 0 2 0 0 0 1 2 2 0 0 1 0 17 0 1699.8741 Q5SY74;E7ETD5;H7BY54;Q96IY1 Q5SY74 17 33 NSL1 Kinetochore-associated protein NSL1 homolog yes no 2 0.0013889 80.459 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 8720400 0 1908000 3596800 0 0 3215700 1934 381 1959 8718;8719;8720 5813;5814;5815 5815 2 ELAAHWAAHTDVKPFK ARRFDHGRELAAHWAA HTDVKPFKCPRCERDF R E L F K C 4 0 0 1 0 0 1 0 2 0 1 2 0 1 1 0 1 1 0 1 0 16 1 1819.937 Q96SL8 Q96SL8 214 229 FIZ1 Flt3-interacting zinc finger protein 1 yes yes 4 0.0042188 52.009 By matching By matching By matching By matching By matching By MS/MS 1 5071900 0 0 0 0 0 5071900 1935 1419 1960 8721 5816 5816 1 ELAAQLNEEAK EKRRAHQKELAAQLNE AQLNEEAKRRLTEQKG K E L A K R 3 0 1 0 0 1 3 0 0 0 2 1 0 0 0 0 0 0 0 0 0 11 0 1214.6143 Q9Y5B9 Q9Y5B9 480 490 SUPT16H FACT complex subunit SPT16 yes yes 2 7.112E-20 119.27 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 25866000 5686800 5312700 1995200 1654600 5960100 5256700 1936 1653 1961 8722;8723;8724;8725;8726;8727;8728 5817;5818;5819;5820;5821 5821 5 ELAETEPKFNSVKEK EKIEEKQKELAETEPK KFNSVKEKEERGIARL K E L E K E 1 0 1 0 0 0 4 0 0 0 1 3 0 1 1 1 1 0 0 1 0 15 2 1747.8992 Q9UQE7 Q9UQE7 343 357 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.018113 52.009 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5746700 536110 1532900 0 0 1039000 2638700 1937 1625 1962 8729;8730;8731;8732 5822 5822 1 ELAFQISK VLVMCHTRELAFQISK ELAFQISKEYERFSKY R E L S K E 1 0 0 0 0 1 1 0 0 1 1 1 0 1 0 1 0 0 0 0 0 8 0 934.51238 H0Y6N8;H0Y4V8;H0Y6G9;H0Y557;F6S4E6;F6UN21;F6TRA5;B4DIJ6;F6WLT2;F8VZL8;H0Y7X6;H0Y7G4;Q5STU3;Q13838;Q13838-2;F8VQ10;H0Y6J9;H0Y6Y9;F6V772;F6QYI9;F6R6M7 H0Y6N8 24 31 DDX39B Spliceosome RNA helicase DDX39B no no 2 0.0117 91.087 By MS/MS By matching By matching By matching By matching By matching 1 1961700 1961700 0 0 0 0 0 1938 91 1963 8733 5823 5823 1 ELAQQVQQVADDYGK CLVLAPTRELAQQVQQ QVADDYGKCSRLKSTC R E L G K C 2 0 0 2 0 4 1 1 0 0 1 1 0 0 0 0 0 0 1 2 0 15 0 1690.8162 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 176 190 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 2 0 208.39 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 222330000 30241000 0 36034000 23624000 108910000 23520000 1939 1361;629 1964 8734;8735;8736;8737;8738 5824;5825;5826;5827;5828 5824 4 ELASCNPVVLEESK QEVMVRIKELASCNPV PVVLEESKALVRCNMK K E L S K A 1 0 1 0 1 0 3 0 0 0 2 1 0 0 1 2 0 0 0 2 0 14 0 1573.7658 Q9Y232-2;Q9Y232;Q9Y232-3;Q9Y232-4 Q9Y232-2 485 498 CDYL Chromodomain Y-like protein yes no 2 0.017064 62.287 By matching By matching By matching By matching By matching By MS/MS 1 1 1018200 0 239400 0 0 0 778830 1940 1628 1965 8739;8740 5829 5829 0 ELASGEYFLKANQK IYNIKIDKELASGEYF YFLKANQKKRQKMEAI K E L Q K K 2 0 1 0 0 1 2 1 0 0 2 2 0 1 0 1 0 0 1 0 0 14 1 1596.8148 Q13601-2;Q13601 Q13601-2 224 237 KRR1 KRR1 small subunit processome component homolog yes no 3 1.526E-12 101.39 By MS/MS By matching By matching By matching By matching By matching 1 2266600 2266600 0 0 0 0 0 1941 1087 1966 8741 5830 5830 1 ELASSEQNKNHINNELK DRLAKLNKELASSEQN NHINNELKRKEEQLSS K E L L K R 1 0 4 0 0 1 3 0 1 1 2 2 0 0 0 2 0 0 0 0 0 17 1 1966.9708 Q92878-2;Q92878;Q92878-3;E7EN38 Q92878-2 606 622 RAD50 DNA repair protein RAD50 yes no 3;4 1.3591E-07 90.725 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 2 2 1 2 17693000 1381400 3735900 2928100 1450600 1780700 6416000 1942 1362 1967 8742;8743;8744;8745;8746;8747;8748;8749;8750;8751 5831;5832;5833;5834 5833 4 ELAVQIYEEARK SLVLAPTRELAVQIYE QIYEEARKFSYRSRVR R E L R K F 2 1 0 0 0 1 3 0 0 1 1 1 0 0 0 0 0 0 1 1 0 12 1 1447.7671 O00571;O00571-2;B4DLU5;B4DXX7;O15523 O00571 277 288 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 3 0.0010155 89.356 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 9118700 2267200 0 0 0 0 6851400 1943 693 1968 8752;8753 5835;5836;5837 5835 3 ELDLHGLYTR KIPAVGGKELDLHGLY DLHGLYTRVTTLGGFA K E L T R V 0 1 0 1 0 0 1 1 1 0 3 0 0 0 0 0 1 0 1 0 0 10 0 1215.6248 Q68CP9-3;Q68CP9 Q68CP9-3 44 53 ARID2 AT-rich interactive domain-containing protein 2 yes no 2 0.017612 65.627 By matching By matching By matching By matching By matching By MS/MS 1 1 2589500 0 0 0 0 402870 2186600 1944 1215 1969 8754;8755 5838 5838 1 ELDPSLVSANDSPSGMQTR NASPQKLRELDPSLVS SPSGMQTRCVWSPLAS R E L T R C 1 1 1 2 0 1 1 1 0 0 2 0 1 0 2 4 1 0 0 1 0 19 0 2002.9266 Q5UIP0-2;Q5UIP0;H7C2B5 Q5UIP0-2 2150 2168 RIF1 Telomere-associated protein RIF1 yes no 2 0.0064501 44.595 By matching By MS/MS By matching By matching By matching By matching 1 2526000 0 2526000 0 0 0 0 1945 1201 1970 8756 5839 5839 1 ELEKVCNPIITK EEFEHQQKELEKVCNP VCNPIITKLYQSAGGM K E L T K L 0 0 1 0 1 0 2 0 0 2 1 2 0 0 1 0 1 0 0 1 0 12 1 1442.7803 P11142;E9PKE3;E9PNE6;A8K7Q2;E9PS65 P11142 598 609 HSPA8 Heat shock cognate 71 kDa protein yes no 3 0.011349 58.04 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 4834900 860650 1328300 652870 371230 0 1621800 1946 824 1971 8757;8758;8759;8760;8761 5840 5840 1 ELELEVINLQKEK YQYQDNIKELELEVIN VINLQKEKEELVLELQ K E L E K E 0 0 1 0 0 1 4 0 0 1 3 2 0 0 0 0 0 0 0 1 0 13 1 1583.877 O95239;O95239-2 O95239 563 575 KIF4A Chromosome-associated kinesin KIF4A yes no 2 1.2347E-88 142.1 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 1947 768 1972 8762 5841 5841 1 ELEQEREDQKVK LKKAQRIKELEQERED EREDQKVKWQQFNNRA K E L V K W 0 1 0 1 0 2 4 0 0 0 1 2 0 0 0 0 0 0 0 1 0 12 2 1529.7686 O75940 O75940 166 177 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 3 0.040428 56.548 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 4241400 528820 1660700 1286200 381960 383740 0 1948 751 1973 8763;8764;8765;8766;8767 5842 5842 1 ELESLQNEHAQR EEQQNLQKELESLQNE LQNEHAQRMEEFYVEQ K E L Q R M 1 1 1 0 0 2 3 0 1 0 2 0 0 0 0 1 0 0 0 0 0 12 0 1452.6957 P12757-5;P12757;P12757-3 P12757-5 561 572 SKIL Ski-like protein yes no 3 0.0028879 69.864 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2885100 0 810650 0 0 848240 1226200 1949 829 1974 8768;8769;8770 5843;5844 5843 2 ELEVMTAK REAQSTARELEVMTAK ELEVMTAKYEGAKVKV R E L A K Y 1 0 0 0 0 0 2 0 0 0 1 1 1 0 0 0 1 0 0 1 0 8 0 919.46847 Q14980-2;Q14980;F5H2L0;H0YFY6;H0YH75 Q14980-2 1504 1511 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 0.0088271 100.02 By matching By matching By matching By matching By matching By MS/MS 1 1 4543500 0 1141000 0 0 0 3402500 1950 1121 1975 8771;8772 5845 5845 1 ELFQTPCTDNPTTDEK LEELTGFRELFQTPCT DNPTTDEKTTKKILCK R E L E K T 0 0 1 2 1 1 2 0 0 0 1 1 0 1 2 0 4 0 0 0 0 16 0 1894.8255 P46013;F5H4V4;P46013-2 P46013 1837 1852 MKI67 Antigen KI-67 no no 2 6.6786E-80 134.88 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 22416000 15020000 0 6148900 0 1246900 0 1951 919;920 1976 8773;8774;8775 5846;5847;5848 5848 3 ELFQTPDHTEESTTDDK LEDLAGFKELFQTPDH EESTTDDKTTKIACKS K E L D K T 0 0 0 3 0 1 3 0 1 0 1 1 0 1 1 1 4 0 0 0 0 17 0 1991.8596 P46013;F5H4V4;P46013-2 P46013 2081 2097 MKI67 Antigen KI-67 no no 3 2.5276E-21 101.3 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 13432000 0 4846000 2473400 662170 1518300 3932100 1952 919;920 1977 8776;8777;8778;8779;8780 5849;5850;5851;5852 5852 4 ELFQTPDHTEESTTDDKTTK LEDLAGFKELFQTPDH TTDDKTTKIACKSPPP K E L T K I 0 0 0 3 0 1 3 0 1 0 1 2 0 1 1 1 6 0 0 0 0 20 1 2322.0499 P46013;F5H4V4;P46013-2 P46013 2081 2100 MKI67 Antigen KI-67 no no 4 0.008139 42.716 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4935800 0 0 1536600 485420 776460 2137300 1953 919;920 1978 8781;8782;8783;8784 5853 5853 1 ELFQTPGHTEEAVAAGK LEDLTGFKELFQTPGH EEAVAAGKTTKMPCES K E L G K T 3 0 0 0 0 1 3 2 1 0 1 1 0 1 1 0 2 0 0 1 0 17 0 1783.8741 P46013;F5H4V4;P46013-2 P46013 1351 1367 MKI67 Antigen KI-67 no no 2;3 1.4254E-07 89.466 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 2 2 54099000 5972200 10108000 7558700 0 8367500 22093000 1954 919;920 1979 8785;8786;8787;8788;8789;8790;8791;8792;8793 5854;5855;5856;5857;5858;5859 5859 6 ELFQTPGHTEELVAAGK LEDLAGFKELFQTPGH EELVAAGKTTKIPCDS K E L G K T 2 0 0 0 0 1 3 2 1 0 2 1 0 1 1 0 2 0 0 1 0 17 0 1825.921 P46013;F5H4V4;P46013-2 P46013 1229 1245 MKI67 Antigen KI-67 no no 2;3 8.8371E-32 108.77 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 1 2 215890000 25983000 55120000 19735000 22412000 7413900 85227000 1955 919;920 1980 8794;8795;8796;8797;8798;8799;8800;8801;8802;8803 5860;5861;5862;5863;5864;5865;5866;5867 5865 8 ELFQTPGHTEESMTDDK LEDLAGFKELFQTPGH EESMTDDKITEVSCKS K E L D K I 0 0 0 2 0 1 3 1 1 0 1 1 1 1 1 1 3 0 0 0 0 17 0 1963.8469 P46013;F5H4V4;P46013-2 P46013 1959 1975 MKI67 Antigen KI-67 no no 2;3 0.0011884 69.485 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 2 2 1 2 2 39911000 3571600 9947500 4881800 3354400 2888100 15267000 1956 919;920 1981 8804;8805;8806;8807;8808;8809;8810;8811;8812;8813 5868;5869;5870;5871;5872 5872 5 ELFQTPGPSEESMTDEK LEDLAGFKELFQTPGP EESMTDEKTTKIACKS K E L E K T 0 0 0 1 0 1 4 1 0 0 1 1 1 1 2 2 2 0 0 0 0 17 0 1923.8408 P46013;F5H4V4;P46013-2 P46013 1107 1123 MKI67 Antigen KI-67 no no 2 1.6396E-73 128.74 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 2 1 79170000 20814000 19066000 0 17122000 0 22167000 1957 919;920 1982 8814;8815;8816;8817;8818 5873;5874;5875;5876;5877 5875 4 ELFQTPGTDKPTTDEK LEDLAGFKELFQTPGT DKPTTDEKTTKIACKS K E L E K T 0 0 0 2 0 1 2 1 0 0 1 2 0 1 2 0 4 0 0 0 0 16 1 1805.8683 P46013;F5H4V4;P46013-2 P46013 2321 2336 MKI67 Antigen KI-67 no no 2;3 0.00019566 87.824 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 3 1 1 1 2 36944000 4606000 9524900 5992200 2388100 0 14433000 1958 919;920 1983 8819;8820;8821;8822;8823;8824;8825;8826 5878;5879;5880;5881;5882;5883 5880 6 ELFQTPICTDKPTTHEK LEDLAGLKELFQTPIC DKPTTHEKTTKIACRS K E L E K T 0 0 0 1 1 1 2 0 1 1 1 2 0 1 2 0 4 0 0 0 0 17 1 2043.9935 P46013;F5H4V4;P46013-2 P46013 2199 2215 MKI67 Antigen KI-67 no no 3;4 0.00020502 85.473 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 2 2 61303000 6813600 13716000 7090700 4785800 5794500 23102000 1959 919;920 1984 8827;8828;8829;8830;8831;8832;8833;8834;8835;8836;8837;8838 5884;5885;5886;5887;5888;5889;5890;5891;5892;5893;5894 5892 11 ELFQTPVCTDKPTTHEK LEDLAGLKELFQTPVC DKPTTHEKTTKIACRS K E L E K T 0 0 0 1 1 1 2 0 1 0 1 2 0 1 2 0 4 0 0 1 0 17 1 2029.9779 P46013;F5H4V4;P46013-2 P46013 1472 1488 MKI67 Antigen KI-67 no no 3;4 1.8757E-21 103.66 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 3 2 67956000 0 25507000 7992900 0 12493000 21963000 1960 919;920 1985 8839;8840;8841;8842;8843;8844;8845;8846 5895;5896;5897;5898;5899;5900;5901;5902 5898 8 ELFSAPGHTEESMTIDK LEDLVDFKELFSAPGH EESMTIDKNTKIPCKS K E L D K N 1 0 0 1 0 0 3 1 1 1 1 1 1 1 1 2 2 0 0 0 0 17 0 1890.8669 P46013;F5H4V4;P46013-2 P46013 2564 2580 MKI67 Antigen KI-67 no no 2;3 1.2808E-21 104.16 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 1 34284000 0 11119000 0 1885800 0 21280000 1961 919;920 1986 8847;8848;8849;8850 5903;5904;5905 5904 3 ELGELIPLRQK AELLRAQRELGELIPL ELIPLRQKVAEQERTA R E L Q K V 0 1 0 0 0 1 2 1 0 1 3 1 0 0 1 0 0 0 0 0 0 11 1 1294.7609 Q14980-2;Q14980;F5H2L0;H0YFY6;H0YH75 Q14980-2 1405 1415 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 2.7675E-105 157.97 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 40735000 0 15224000 4919900 0 3995000 16596000 1962 1121 1987 8851;8852;8853;8854 5906;5907;5908 5906 3 ELHVGENQIEMLEAEHLK FPSCSLLKELHVGENQ MLEAEHLKHLNSILVL K E L L K H 1 0 1 0 0 1 5 1 2 1 3 1 1 0 0 0 0 0 0 1 0 18 0 2118.0416 Q9H9A6 Q9H9A6 269 286 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 4 0.0012454 58.164 By matching By matching By matching By matching By matching By MS/MS 1 7958000 0 0 0 0 0 7958000 1963 1505 1988 8855 5909 5909 172 1 ELIEIGCEDK IFGNAVSRELIEIGCE IEIGCEDKTLAFKMNG R E L D K T 0 0 0 1 1 0 3 1 0 2 1 1 0 0 0 0 0 0 0 0 0 10 0 1204.5646 H0Y818;P40692;F5H745;E9PEB4;H0Y3I0;E9PCU2;H0Y5L7;H0Y793 H0Y818 219 228 MLH1 DNA mismatch repair protein Mlh1 yes no 2 0.025409 59.265 By matching By matching By matching By matching By matching By MS/MS 1 1126900 0 0 0 0 0 1126900 1964 614 1989 8856 5910 5910 1 ELISDNQYR GIYQSKVRELISDNQY LISDNQYRLIVNVNDL R E L Y R L 0 1 1 1 0 1 1 0 0 1 1 0 0 0 0 1 0 0 1 0 0 9 0 1136.5462 P25205 P25205 38 46 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.0060651 93.649 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 12479000 523440 3340000 1394600 0 2186800 5034600 1965 873 1990 8857;8858;8859;8860;8861 5911;5912;5913 5911 3 ELKTDSSPNQAR YIQFSNHKELKTDSSP DSSPNQARAQAALQAV K E L A R A 1 1 1 1 0 1 1 0 0 0 1 1 0 0 1 2 1 0 0 0 0 12 1 1344.6634 P26599;P26599-2;P26599-3 P26599 135 146 PTBP1 Polypyrimidine tract-binding protein 1 yes no 3 0.0059663 63.473 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1264900 119460 677900 0 137390 0 330140 1966 882 1991 8862;8863;8864;8865 5914 5914 1 ELLADLER KLSAQERKELLADLER ELLADLEREKPQTKIL K E L E R E 1 1 0 1 0 0 2 0 0 0 3 0 0 0 0 0 0 0 0 0 0 8 0 957.51311 O94762;B7Z8Y7;O94762-2;O94762-3 O94762 111 118 RECQL5 ATP-dependent DNA helicase Q5 yes no 2 0.015715 83.948 By matching By matching By matching By matching By matching By MS/MS 1 2202600 0 0 0 0 0 2202600 1967 197 1992 8866 5915 5915 1 ELLADQNLK ELSKVGGKELLADQNL LLADQNLKFIDPFCKI K E L L K F 1 0 1 1 0 1 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 9 0 1042.5659 Q14684-2;Q14684 Q14684-2 165 173 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 2 6.4765E-12 122.33 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 48334000 3521300 9110700 3547500 2906000 8389000 20859000 1968 1111 1993 8867;8868;8869;8870;8871;8872 5916;5917;5918;5919 5917 4 ELLASAPTGSGK IPVMLHGRELLASAPT SAPTGSGKTLAFSIPI R E L G K T 2 0 0 0 0 0 1 2 0 0 2 1 0 0 1 2 1 0 0 0 0 12 0 1129.5979 Q9Y2R4;A8MTP9 Q9Y2R4 204 215 DDX52 Probable ATP-dependent RNA helicase DDX52 yes no 2 0.0034305 70.089 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 38236000 4597400 5882800 2995900 2510200 9050600 13199000 1969 1635 1994 8873;8874;8875;8876;8877;8878;8879 5920;5921;5922;5923;5924;5925 5924 6 ELLDSDSDKPCK EKKDQDVKELLDSDSD SDSDKPCKEEPMEVDD K E L C K E 0 0 0 3 1 0 1 0 0 0 2 2 0 0 1 2 0 0 0 0 0 12 1 1405.6395 Q12830-4;Q12830-2;Q12830 Q12830-4 1127 1138 BPTF Nucleosome-remodeling factor subunit BPTF yes no 3 0.028202 48.568 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 1 2421000 313420 1150600 0 0 0 957030 1970 1061 1995 8880;8881;8882;8883 5926;5927 5927 2 ELLDTELDLHK KTKTEAQKELLDTELD DTELDLHKRLSSGEDT K E L H K R 0 0 0 2 0 0 2 0 1 0 4 1 0 0 0 0 1 0 0 0 0 11 0 1324.6874 Q9P2N5 Q9P2N5 901 911 RBM27 RNA-binding protein 27 yes yes 2;3 6.6859E-13 115.57 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 114320000 7521100 99974000 0 0 0 6820900 1971 1579 1996 8884;8885;8886 5928;5929;5930 5928 3 ELLEYYQK LAKLHPSKELLEYYQK ELLEYYQKKMAECEAE K E L Q K K 0 0 0 0 0 1 2 0 0 0 2 1 0 0 0 0 0 0 2 0 0 8 0 1084.5441 F5H0W5;Q9BR77-2;Q9BR77;F5H5Q8 F5H0W5 25 32 CCDC77 Coiled-coil domain-containing protein 77 yes no 2 0.010634 91.853 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4472700 0 1105900 983950 0 357190 2025700 1972 506 1997 8887;8888;8889;8890 5931 5931 1 ELLGPPEAK GPVKLSQKELLGPPEA LLGPPEAKRARGPEEE K E L A K R 1 0 0 0 0 0 2 1 0 0 2 1 0 0 2 0 0 0 0 0 0 9 0 952.52295 Q14807;B7Z265;H3BRB3 Q14807 392 400 KIF22 Kinesin-like protein KIF22 yes no 2 4.0861E-29 131.5 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 50780000 0 10827000 8390200 3339300 6147200 22077000 1973 1115 1998 8891;8892;8893;8894;8895 5932;5933 5933 2 ELLKQYEKQEK KMYQQKQKELLKQYEK KQYEKQEKKLKELKAG K E L E K K 0 0 0 0 0 2 3 0 0 0 2 3 0 0 0 0 0 0 1 0 0 11 2 1434.7718 Q8NE71;Q8NE71-2;H0YGW7 Q8NE71 546 556 ABCF1 ATP-binding cassette sub-family F member 1 yes no 3 0.0010938 97.597 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 15113000 0 1919000 3576200 3022100 3456900 3139000 1974 1321 1999 8896;8897;8898;8899;8900 5934;5935;5936 5934 3 ELLNFYAWQHRESK ERRKRSRKELLNFYAW AWQHRESKMEHLAQLR K E L S K M 1 1 1 0 0 1 2 0 1 0 2 1 0 1 0 1 0 1 1 0 0 14 1 1819.9006 Q9Y3A4 Q9Y3A4 237 250 RRP7A Ribosomal RNA-processing protein 7 homolog A yes yes 3 0.0011287 72.681 By matching By matching By matching By matching By MS/MS By matching 1 26490000 0 0 0 0 26490000 0 1975 1643 2000 8901 5937 5937 1 ELLSAEENK EEENVHSKELLSAEEN LLSAEENKRAHELIEA K E L N K R 1 0 1 0 0 0 3 0 0 0 2 1 0 0 0 1 0 0 0 0 0 9 0 1031.5135 Q9NWH9;H7BXE3;H0YL55;H0YKU6 Q9NWH9 141 149 SLTM SAFB-like transcription modulator yes no 2 1.3105E-11 119.62 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 14347000 1953200 2170300 3085100 1848100 2225100 3065300 1976 1554 2001 8902;8903;8904;8905;8906;8907 5938;5939;5940;5941;5942 5939 5 ELMERLK VDDDGEEKELMERLKK KELMERLKKLSVPTSD K E L L K K 0 1 0 0 0 0 2 0 0 0 2 1 1 0 0 0 0 0 0 0 0 7 1 917.50044 E9PC67;F8VQZ0;Q5STZ8;Q8NE71;Q8NE71-2;Q5STZ7 Q8NE71 96 102 ABCF1 ATP-binding cassette sub-family F member 1 no no 2 0.024633 99.375 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 2989400 574560 429490 1174100 0 811240 0 1977 1321;411 2002 8908;8909;8910;8911 5943 5943 1 ELNEELQAIDKLK E L L K 1 0 1 1 0 1 3 0 0 1 3 2 0 0 0 0 0 0 0 0 0 13 1 1541.8301 REV__E7EX27 yes no 3 0.001922 84.821 By MS/MS By matching By matching By matching By MS/MS By matching 2 1 2 1 7053300 1724600 376050 0 0 3908700 1043900 + 1978 1668 2003 8912;8913;8914;8915;8916;8917 5944;5945 5944 2 ELNYNLDTHTSTGR STRTPVAKELNYNLDT DTHTSTGRIKAAEKKE K E L G R I 0 1 2 1 0 0 1 1 1 0 2 0 0 0 0 1 3 0 1 0 0 14 0 1619.754 Q9NSV4-6;A8MYX0;Q9NSV4-5;C9JL55;Q9NSV4-4;C9JDG1;Q9NSV4;C9JDG0 Q9NSV4-6 1065 1078 DIAPH3 Protein diaphanous homolog 3 yes no 3 0.0040976 69.314 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 7077300 766270 765450 846260 555340 1748400 2395500 1979 54 2004 8918;8919;8920;8921;8922;8923 5946 5946 0 ELPAVELRNGK EQFCCYFKELPAVELR AVELRNGKTAGRRTYH K E L G K T 1 1 1 0 0 0 2 1 0 0 2 1 0 0 1 0 0 0 0 1 0 11 1 1224.6826 Q6JHV3;H0YMI4;Q9Y6I4;B3KMX7;H0YLB7;H0YKU8;F5H1A6 Q6JHV3 167 177 USP3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 2;3 0.0039182 80.24 By MS/MS By MS/MS By matching By matching By matching By MS/MS 2 1 1 2 31535000 4683900 3632600 6323800 0 0 16895000 1980 628 2005 8924;8925;8926;8927;8928;8929 5947;5948;5949;5950 5947 4 ELPEQLQEHAIEDK ELVEGEMKELPEQLQE QEHAIEDKETINNLDT K E L D K E 1 0 0 1 0 2 4 0 1 1 2 1 0 0 1 0 0 0 0 0 0 14 0 1677.821 Q15424;F5GZU3 Q15424 173 186 SAFB Scaffold attachment factor B1 yes no 2;3 7.6297E-70 134.4 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 2 34836000 3069900 7137400 3742700 2676500 8500400 9709100 1981 1137 2006 8930;8931;8932;8933;8934;8935;8936;8937;8938 5951;5952;5953;5954;5955;5956;5957;5958;5959 5957 9 ELPSFLGK ELKELLTRELPSFLGK ELPSFLGKRTDEAAFQ R E L G K R 0 0 0 0 0 0 1 1 0 0 2 1 0 1 1 1 0 0 0 0 0 8 0 889.49092 P26447;F5H3J5 P26447 41 48 S100A4 Protein S100-A4 yes no 2 0.034579 69.812 By matching By MS/MS By matching By matching By matching By matching 1 22540000 0 22540000 0 0 0 0 1982 881 2007 8939 5960 5960 1 ELPSHVQAMHK QVNHRMKKELPSHVQA SHVQAMHKRKEFLDYQ K E L H K R 1 0 0 0 0 1 1 0 2 0 1 1 1 0 1 1 0 0 0 1 0 11 0 1275.6394 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 2072 2082 SETX Probable helicase senataxin yes no 3 0.015535 60.398 By matching By matching By MS/MS By matching By matching By matching 1 412260 0 0 412260 0 0 0 1983 1250 2008 8940 5961 5961 1 ELPTVTTNVQNSQDK VALALSVKELPTVTTN NVQNSQDKSIEKHGSS K E L D K S 0 0 2 1 0 2 1 0 0 0 1 1 0 0 1 1 3 0 0 2 0 15 0 1672.8268 Q96B01-2;Q96B01;Q96B01-3;F5H1Y0;H0YGT5 Q96B01-2 92 106 RAD51AP1 RAD51-associated protein 1 yes no 2 0.0034282 56.793 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 2554700 0 1806400 748350 0 0 0 1984 1369 2009 8941;8942 5962;5963 5962 2 ELQEVIQQQNEK CLRYKNEKELQEVIQQ VIQQQNEKILEQIDKS K E L E K I 0 0 1 0 0 4 3 0 0 1 1 1 0 0 0 0 0 0 0 1 0 12 0 1484.7471 Q96R06 Q96R06 1043 1054 SPAG5 Sperm-associated antigen 5 yes yes 2 0.016722 53.448 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1639500 0 396550 590540 0 0 652380 1985 1416 2010 8943;8944;8945 5964 5964 1 ELQKGEVPKFK LQKEKKIKELQKGEVP KGEVPKFKALPLPHFD K E L F K A 0 0 0 0 0 1 2 1 0 0 1 3 0 1 1 0 0 0 0 1 0 11 2 1301.7343 Q9ULW0;Q96RR5 Q9ULW0 557 567 TPX2;HCA90 Targeting protein for Xklp2 yes no 3 6.628E-55 141.1 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 61199000 4034800 13002000 8631600 5348500 7303000 22879000 1986 1611 2011 8946;8947;8948;8949;8950;8951 5965;5966 5966 2 ELQNDMTDEK KAATHAEKELQNDMTD QNDMTDEKSVGDESWE K E L E K S 0 0 1 2 0 1 2 0 0 0 1 1 1 0 0 0 1 0 0 0 0 10 0 1221.5183 O75691 O75691 773 782 UTP20 Small subunit processome component 20 homolog yes yes 2 0.014544 68.355 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 3481200 0 582120 0 485180 0 2413900 1987 750 2012 8952;8953;8954 5967;5968 5967 2 ELQPIVYTPEDCRK QLNDSLSKELQPIVYT YTPEDCRKAFQNPSTV K E L R K A 0 1 0 1 1 1 2 0 0 1 1 1 0 0 2 0 1 0 1 1 0 14 1 1746.8611 Q8NI77 Q8NI77 699 712 KIF18A Kinesin-like protein KIF18A yes yes 3 0.03763 34.444 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5160500 0 1050400 1235500 955490 0 1919200 1988 1332 2013 8955;8956;8957;8958 5969 5969 1 ELQQYIQAR ESEDNFAKELQQYIQA LQQYIQAREMANAAQP K E L A R E 1 1 0 0 0 3 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 9 0 1147.5986 Q8N5P1 Q8N5P1 93 101 ZC3H8 Zinc finger CCCH domain-containing protein 8 yes yes 2 0.00087013 109.11 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 31958000 3498300 3921400 0 6857100 6068000 11613000 1989 1304 2014 8959;8960;8961;8962;8963 5970;5971;5972;5973;5974 5974 5 ELQRAASQDHVR GTRREEQKELQRAASQ AASQDHVRGFLEKESA K E L V R G 2 2 0 1 0 2 1 0 1 0 1 0 0 0 0 1 0 0 0 1 0 12 1 1408.7171 Q9Y314 Q9Y314 101 112 NOSIP Nitric oxide synthase-interacting protein yes yes 3 0.032347 46.985 By matching By matching By MS/MS By matching By matching By matching 1 540610 0 0 540610 0 0 0 1990 1642 2015 8964 5975 5975 1 ELQRAASQDHVRGFLEK GTRREEQKELQRAASQ HVRGFLEKESAIVSRP K E L E K E 2 2 0 1 0 2 2 1 1 0 2 1 0 1 0 1 0 0 0 1 0 17 2 1983.0286 Q9Y314 Q9Y314 101 117 NOSIP Nitric oxide synthase-interacting protein yes yes 3;4 0.0064035 51.591 By matching By matching By MS/MS By matching By matching By MS/MS 1 2 1 1 24032000 0 1123600 16929000 2312800 0 3667300 1991 1642 2016 8965;8966;8967;8968;8969 5976;5977 5976 2 ELRAYQQSEAYK REKQQYMKELRAYQQS YQQSEAYKMCTEKIQ_ K E L Y K M 2 1 0 0 0 2 2 0 0 0 1 1 0 0 0 1 0 0 2 0 0 12 1 1484.726 C9K049;C9J8X5;Q9P0W2-3;Q9P0W2;Q9P0W2-2;B5MDG7 C9K049 147 158 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes no 3 0.0024613 74.698 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 9441300 0 1930600 1885900 1068000 1505800 3051100 1992 235 2017 8970;8971;8972;8973;8974 5978;5979;5980;5981;5982 5980 5 ELRENTQTTIK GVKGAKIKELRENTQT ENTQTTIKLFQECCPH K E L I K L 0 1 1 0 0 1 2 0 0 1 1 1 0 0 0 0 3 0 0 0 0 11 1 1331.7045 P61978-3;P61978-2;B4DFF1;P61978;Q5T6W5;Q5T6W2;Q5T6W1 P61978-3 145 155 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 3 1.2664E-12 113.69 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 120900000 0 34019000 30965000 9189400 9832600 36895000 1993 984 2018 8975;8976;8977;8978;8979 5983 5983 1 ELRNQTPAPSAAQTSAPSK ETDSAVQKELRNQTPA AQTSAPSKYHRTRSGG K E L S K Y 4 1 1 0 0 2 1 0 0 0 1 1 0 0 3 3 2 0 0 0 0 19 1 1952.9916 E9PHD6;Q9P265 E9PHD6 66 84 DIP2B Disco-interacting protein 2 homolog B yes no 3 0.00044366 66.448 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 5830800 960840 0 0 1501400 1693900 1674600 1994 437 2019 8980;8981;8982;8983 5984;5985;5986;5987 5987 4 ELRNVLLNNSEK RQLYMVSKELRNVLLN VLLNNSEKMKVINTGI K E L E K M 0 1 3 0 0 0 2 0 0 0 3 1 0 0 0 1 0 0 0 1 0 12 1 1427.7732 Q08J23-2;Q08J23;G3V1R4 Q08J23-2 531 542 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes no 3 0.00056847 84.169 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 4071800 0 1823800 0 0 2248000 0 1995 1050 2020 8984;8985;8986 5988;5989 5988 2 ELSAALQDK EKQAQLEKELSAALQD LSAALQDKKCLEEKNE K E L D K K 2 0 0 1 0 1 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 9 0 973.50803 Q14980-2;Q14980;Q9BTE9;F5H4J1;F5H6Y5 Q14980-2 365 373 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 0.024935 67.113 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4396500 0 1522400 0 0 421010 2453100 1996 1121 2021 8987;8988;8989 5990 5990 1 ELSEMRAPPAATNSSK EDQKRYERELSEMRAP PAATNSSKKMKFQGEP R E L S K K 3 1 1 0 0 0 2 0 0 0 1 1 1 0 2 3 1 0 0 0 0 16 1 1687.8199 E9PKP7;P17480-2;P17480;E9PLT2 E9PKP7 507 522 UBTF Nucleolar transcription factor 1 yes no 3 0.012922 43.861 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 3223100 846720 537040 0 0 832960 1006400 1997 455 2022 8990;8991;8992;8993 5991 5991 1 ELSPAALEK ARGQGSAKELSPAALE LSPAALEKRRRRKQER K E L E K R 2 0 0 0 0 0 2 0 0 0 2 1 0 0 1 1 0 0 0 0 0 9 0 956.51786 O75683 O75683 136 144 SURF6 Surfeit locus protein 6 yes yes 2 0.021779 68.847 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 5915700 1130200 759260 869050 529470 1517800 1109900 1998 749 2023 8994;8995;8996;8997;8998;8999 5992;5993 5993 2 ELSQLQAAQEK EEKEILQKELSQLQAA QLQAAQEKQKTGTVMD K E L E K Q 2 0 0 0 0 3 2 0 0 0 2 1 0 0 0 1 0 0 0 0 0 11 0 1243.6408 P49454 P49454 2911 2921 CENPF Centromere protein F yes yes 2 0.025196 62.338 By matching By matching By matching By matching By matching By MS/MS 1 1 751540 0 212660 0 0 0 538890 1999 936 2024 9000;9001 5994 5994 0 ELSQLQAAQEKQK EEKEILQKELSQLQAA QAAQEKQKTGTVMDTK K E L Q K T 2 0 0 0 0 4 2 0 0 0 2 2 0 0 0 1 0 0 0 0 0 13 1 1499.7944 P49454 P49454 2911 2923 CENPF Centromere protein F yes yes 3 0.001312 89.805 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 8998000 999450 2014500 1944400 559260 606600 2873900 2000 936 2025 9002;9003;9004;9005;9006;9007 5995;5996 5995 2 ELSQNTDESGLNDEAIAK KMVASKRKELSQNTDE LNDEAIAKQLQLDEDA K E L A K Q 2 0 2 2 0 1 3 1 0 1 2 1 0 0 0 2 1 0 0 0 0 18 0 1932.8912 P35251-2;P35251 P35251-2 188 205 RFC1 Replication factor C subunit 1 yes no 2 0.007896 43.955 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 7646000 0 2465100 1615400 896400 0 2669100 2001 896 2026 9008;9009;9010;9011 5997;5998;5999 5998 3 ELSSALTTPEMQK RYMEAELKELSSALTT LTTPEMQKEIQELKKE K E L Q K E 1 0 0 0 0 1 2 0 0 0 2 1 1 0 1 2 2 0 0 0 0 13 0 1433.7072 Q9P2W1 Q9P2W1 116 128 PSMC3IP Homologous-pairing protein 2 homolog yes yes 2 0.02658 45.825 By matching By MS/MS By matching By matching By matching By matching 1 1 4548300 0 1361000 0 0 0 3187300 2002 1580 2027 9012;9013 6000 6000 1 ELSVEEQIKR LWEGEVVKELSVEEQI SVEEQIKRNRYYDEDE K E L K R N 0 1 0 0 0 1 3 0 0 1 1 1 0 0 0 1 0 0 0 1 0 10 1 1229.6616 F8VQE1;Q9UHB6-2;B4DN52;Q9UHB6;Q9UHB6-4;F8VS07;Q9UHB6-3 F8VQE1 578 587 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.0056164 72.243 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1848400 629310 779960 0 0 439110 0 2003 107 2028 9014;9015;9016 6001 6001 1 ELTAPDENIPAK ITLQQQLKELTAPDEN PDENIPAKILSYNRAN K E L A K I 2 0 1 1 0 0 2 0 0 1 1 1 0 0 2 0 1 0 0 0 0 12 0 1296.6561 P11387 P11387 604 615 TOP1 DNA topoisomerase 1 yes yes 2 0.0017931 78.548 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 3146500 0 1242600 0 0 0 1903900 2004 825 2029 9017;9018 6002;6003 6002 2 ELTEEQQNLQK LSSSKSMKELTEEQQN EEQQNLQKELESLQNE K E L Q K E 0 0 1 0 0 3 3 0 0 0 2 1 0 0 0 0 1 0 0 0 0 11 0 1358.6678 P12757-5;P12757;P12757-3 P12757-5 550 560 SKIL Ski-like protein yes no 2 0.0041726 78.342 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 3372600 305940 1547400 498050 193610 827580 0 2005 829 2030 9019;9020;9021;9022;9023 6004;6005;6006;6007 6006 3 ELVELNK LRQAQMSKELVELNKA KELVELNKALALKEAL K E L N K A 0 0 1 0 0 0 2 0 0 0 2 1 0 0 0 0 0 0 0 1 0 7 0 843.47018 O95239;O95239-2 O95239 525 531 KIF4A Chromosome-associated kinesin KIF4A yes no 2 0.014444 104.37 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 9441200 0 0 1839600 998490 1849600 4753500 2006 768 2031 9024;9025;9026;9027 6008;6009 6009 2 ELYGVGVEK TRIMCILRELYGVGVE LYGVGVEKLRIEHQTI R E L E K L 0 0 0 0 0 0 2 2 0 0 1 1 0 0 0 0 0 0 1 2 0 9 0 992.51786 C9JU95;P40938 C9JU95 58 66 RFC3 Replication factor C subunit 3 yes no 2 0.0071717 89.029 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 15974000 0 2187200 0 0 2410400 11376000 2007 270 2032 9028;9029;9030 6010;6011 6010 2 ELYIQHAK KNLSDSEKELYIQHAK ELYIQHAKEDETRYHN K E L A K E 1 0 0 0 0 1 1 0 1 1 1 1 0 0 0 0 0 0 1 0 0 8 0 1000.5342 Q00059;A8MRB2 Q00059 198 205 TFAM Transcription factor A, mitochondrial yes no 2 0.0061239 95.352 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 4895300 684460 1201500 2636900 0 372400 0 2008 1019 2033 9031;9032;9033;9034 6012;6013 6012 2 ELYSSGEFSSGRK RTAHERAKELYSSGEF GEFSSGRKWGDDAPKE K E L R K W 0 1 0 0 0 0 2 2 0 0 1 1 0 1 0 4 0 0 1 0 0 13 1 1445.6787 Q96HW7;Q96HW7-2;Q96HW7-3;Q96LV5;Q2T9F4 Q96HW7 341 353 INTS4;INTS4L1;INTS4L2 Integrator complex subunit 4;Integrator complex subunit 4-like protein 1;Integrator complex subunit 4-like protein 2 yes no 3 1.8048E-09 103.43 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 6873200 232860 0 881810 463850 1803900 3490700 2009 1393 2034 9035;9036;9037;9038;9039 6014;6015;6016 6015 3 ELYTVVQHVK LKCRREDKELYTVVQH YTVVQHVKHFNDVVEF K E L V K H 0 0 0 0 0 1 1 0 1 0 1 1 0 0 0 0 1 0 1 3 0 10 0 1214.6659 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 631 640 WAPAL Wings apart-like protein homolog yes no 2;3 0.011658 68.847 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 2 2 2 2 18480000 718870 1429300 2160900 822400 3878600 9470200 2010 1253 2035 9040;9041;9042;9043;9044;9045;9046;9047;9048;9049 6017;6018;6019;6020 6018 4 EMAAASAAAISGAGR GSTQQRRREMAAASAA AAISGAGRCRLSKIGA R E M G R C 7 1 0 0 0 0 1 2 0 1 0 0 1 0 0 2 0 0 0 0 0 15 0 1332.6456 Q14807;H3BQB9 Q14807 13 27 KIF22 Kinesin-like protein KIF22 yes no 2 2.9719E-30 113.43 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 11067000 0 2167500 1621500 673500 2104400 4500100 2011 1115 2036 9050;9051;9052;9053;9054 6021 6021 1 EMAAQIREVEQSR EKEDKVIKEMAAQIRE IREVEQSRQEVVRSVL K E M S R Q 2 2 0 0 0 2 3 0 0 1 0 0 1 0 0 1 0 0 0 1 0 13 1 1545.7569 Q86UT8;E9PJ16 Q86UT8 150 162 CCDC84 Coiled-coil domain-containing protein 84 yes no 3 0.0022757 68.515 By matching By MS/MS By matching By matching By matching By matching 1 8524800 0 8524800 0 0 0 0 2012 1263 2037 9055 6022 6022 1 EMANAAQPEESTK LQQYIQAREMANAAQP AQPEESTKKEGVKDTP R E M T K K 3 0 1 0 0 1 3 0 0 0 0 1 1 0 1 1 1 0 0 0 0 13 0 1404.6191 Q8N5P1 Q8N5P1 102 114 ZC3H8 Zinc finger CCCH domain-containing protein 8 yes yes 2 0.0022325 67.019 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 3478500 0 680800 0 0 1294600 1503100 2013 1304 2038 9056;9057;9058 6023;6024;6025 6023 3 EMANAAQPEESTKK LQQYIQAREMANAAQP QPEESTKKEGVKDTPQ R E M K K E 3 0 1 0 0 1 3 0 0 0 0 2 1 0 1 1 1 0 0 0 0 14 1 1532.7141 Q8N5P1 Q8N5P1 102 115 ZC3H8 Zinc finger CCCH domain-containing protein 8 yes yes 3 0.0031461 54.871 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 2266100 350730 554640 868940 491830 0 0 2014 1304 2039 9059;9060;9061;9062 6026 6026 1 EMAPVPGTTTTTTSVK VSTPDNRKEMAPVPGT TTTTTSVKKEELVPSE K E M V K K 1 0 0 0 0 0 1 1 0 0 0 1 1 0 2 1 6 0 0 2 0 16 0 1619.8076 O75150-4;H3BP71;O75150;F8W8Z4;O75150-3 O75150-4 463 478 RNF40 E3 ubiquitin-protein ligase BRE1B yes no 2 0.0024129 61.186 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2761800 0 538200 491680 0 0 1731900 2015 634 2040 9063;9064;9065 6027;6028 6027 2 EMAPVPGTTTTTTSVKK VSTPDNRKEMAPVPGT TTTTSVKKEELVPSEE K E M K K E 1 0 0 0 0 0 1 1 0 0 0 2 1 0 2 1 6 0 0 2 0 17 1 1747.9026 O75150-4;H3BP71;O75150;F8W8Z4;O75150-3 O75150-4 463 479 RNF40 E3 ubiquitin-protein ligase BRE1B yes no 3 0.0059666 42.149 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 6254700 833150 1116900 2426000 862940 1015700 0 2016 634 2041 9066;9067;9068;9069;9070 6029;6030;6031;6032 6029 4 EMAQQELSSQK MQGIQIAKEMAQQELS QQELSSQKAAYESKIK K E M Q K A 1 0 0 0 0 3 2 0 0 0 1 1 1 0 0 2 0 0 0 0 0 11 0 1277.5922 Q15058 Q15058 963 973 KIF14 Kinesin-like protein KIF14 yes yes 2 0.0042905 65.179 By matching By matching By matching By matching By matching By MS/MS 1 659150 0 0 0 0 0 659150 2017 1128 2042 9071 6033 6033 1 EMCDVEQVLSK TPNSKILKEMCDVEQV DVEQVLSKKTPPAPSP K E M S K K 0 0 0 1 1 1 2 0 0 0 1 1 1 0 0 1 0 0 0 2 0 11 0 1336.6003 O95239;F5H4Q9 O95239 1169 1179 KIF4A Chromosome-associated kinesin KIF4A yes no 2 7.0863E-55 136.96 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 69062000 8430500 20863000 18486000 1992400 1587200 17703000 2018 768 2043 9072;9073;9074;9075;9076;9077 6034;6035;6036;6037;6038;6039;6040 6040 7 EMEAQQAALDPALK SILQQARREMEAQQAA AALDPALKQAPLSQSD R E M L K Q 4 0 0 1 0 2 2 0 0 0 2 1 1 0 1 0 0 0 0 0 0 14 0 1513.7446 P39880-2;P39880;P39880-3;P39880-4;P39880-5;P39880-6 P39880-2 694 707 CUX1 Homeobox protein cut-like 1 yes no 2 8.0105E-42 121.42 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 3812500 1218400 1075500 0 0 0 1518500 2019 906 2044 9078;9079;9080 6041;6042;6043 6041 3 EMEREAEYEESVAK PLILEEEREMEREAEY EYEESVAKEDQPAVPG R E M A K E 2 1 0 0 0 0 6 0 0 0 0 1 1 0 0 1 0 0 1 1 0 14 1 1698.7407 Q9UNX4 Q9UNX4 716 729 WDR3 WD repeat-containing protein 3 yes yes 3 0.028434 41.996 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 2298300 0 571910 736120 329430 0 660810 2020 1617 2045 9081;9082;9083;9084 6044 6044 1 EMESIDQYIER KLHEAHFKEMESIDQY SIDQYIERKKKHFEEH K E M E R K 0 1 0 1 0 1 3 0 0 2 0 0 1 0 0 1 0 0 1 0 0 11 0 1411.6289 Q9BXS6-2;Q9BXS6-3;Q9BXS6;E7ERR5;Q9BXS6-5;E9PB35;H0YMD2;Q9BXS6-4 Q9BXS6-2 195 205 NUSAP1 Nucleolar and spindle-associated protein 1 no no 2 0.01585 79.492 By matching By MS/MS By matching By matching By matching By matching 1 5142800 0 5142800 0 0 0 0 2021 1463;1464 2046 9085 6045 6045 0 EMFEDTVEER ________________ FEDTVEERVINEEYKI K E M E R V 0 1 0 1 0 0 4 0 0 0 0 0 1 1 0 0 1 0 0 1 0 10 0 1283.534 Q16576;E9PC52 Q16576 5 14 RBBP7 Histone-binding protein RBBP7 yes no 2 0.00019541 108.43 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 3 3 1 1 3 70578000 1493700 28137000 26674000 1259500 2156200 10857000 2022 1153 2047;2048 9086;9087;9088;9089;9090;9091;9092;9093;9094;9095;9096;9097 6046;6047;6048;6049;6050;6051;6052;6053 6049 144 8 EMFEDTVEERVINEEYK ________________ RVINEEYKIWKKNTPF K E M Y K I 0 1 1 1 0 0 6 0 0 1 0 1 1 1 0 0 1 0 1 2 0 17 1 2158.9729 Q16576;E9PC52 Q16576 5 21 RBBP7 Histone-binding protein RBBP7 yes no 3 3.9724E-180 155.37 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 189160000 0 0 62738000 0 59577000 66840000 2023 1153 2049 9098;9099;9100 6054;6055 6054 144 2 EMGFTNMTEIQHK ENTLKAIKEMGFTNMT NMTEIQHKSIRPLLEG K E M H K S 0 0 1 0 0 1 2 1 1 1 0 1 2 1 0 0 2 0 0 0 0 13 0 1564.7014 Q9NVP1 Q9NVP1 196 208 DDX18 ATP-dependent RNA helicase DDX18 yes yes 3 0.0042879 61.11 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 21104000 0 2727000 2716100 0 7931000 7729500 2024 1550 2050 9101;9102;9103;9104 6056;6057 6057 2 EMGQMQVLQMK EERKQHLKEMGQMQVL QMQVLQMKSEHQKLEE K E M M K S 0 0 0 0 0 3 1 1 0 0 1 1 3 0 0 0 0 0 0 1 0 11 0 1321.6192 Q92878-2;Q92878;Q92878-3 Q92878-2 1050 1060 RAD50 DNA repair protein RAD50 yes no 2 0.0037621 80.706 By matching By matching By matching By matching By MS/MS By matching 1 4717800 0 0 0 0 4717800 0 2025 1362 2051 9105 6058 6058 1 EMIELRQQLDKER EKAEDLRREMIELRQQ RQQLDKERSVRMMLEE R E M E R S 0 2 0 1 0 2 3 0 0 1 2 1 1 0 0 0 0 0 0 0 0 13 2 1686.8723 Q01664;I3L254 Q01664 154 166 TFAP4 Transcription factor AP-4 yes no 3 0.0069682 69.864 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 12557000 706010 1794900 3651000 0 0 6405200 2026 1029 2052 9106;9107;9108;9109 6059 6059 1 EMQLRQEEER NQEMQKRKEMQLRQEE QLRQEEERRRREEEMM K E M E R R 0 2 0 0 0 2 4 0 0 0 1 0 1 0 0 0 0 0 0 0 0 10 1 1346.6249 P23246;P23246-2;H0Y9K7 P23246 562 571 SFPQ Splicing factor, proline- and glutamine-rich yes no 3 0.0087826 80.916 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 5635700 685890 587270 636340 342770 1569300 1814200 2027 865 2053 9110;9111;9112;9113;9114;9115 6060;6061 6060 2 EMTLDEWKAIQNKDR EVKEEGPKEMTLDEWK KAIQNKDRAKVEFNIR K E M D R A 1 1 1 2 0 1 2 0 0 1 1 2 1 0 0 0 1 1 0 0 0 15 2 1875.9149 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51 287 301 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein no no 4 0.0022062 60.345 By matching By MS/MS By matching By matching By matching By matching 1 5268100 0 5268100 0 0 0 0 2028 1316;1317 2054 9116 6062;6063 6063 2 EMVGALVSDGLDRKEPR PVLVKKEKEMVGALVS GLDRKEPRAGEVICID K E M P R A 1 2 0 2 0 0 2 2 0 0 2 1 1 0 1 1 0 0 0 2 0 17 2 1870.9571 Q12873;E9PG89;Q12873-2 Q12873 1975 1991 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 3 0.005129 59.68 By matching By MS/MS By matching By matching By matching By matching 2 1 48380000 0 47656000 0 723940 0 0 2029 430 2055;2056 9117;9118;9119 6064;6065 6065 47 2 EMVICSEASSTYQR QCECGRRKEMVICSEA EASSTYQRIAAISMAS K E M Q R I 1 1 0 0 1 1 2 0 0 1 0 0 1 0 0 3 1 0 1 1 0 14 0 1659.7233 Q12986;Q12986-2;E9PG33 Q12986 897 910 NFX1 Transcriptional repressor NF-X1 yes no 2 0.0076264 52.891 By matching By matching By matching By matching By matching By MS/MS 1 710940 0 0 0 0 0 710940 2030 1066 2057 9120 6066 6066 1 EMVLEIIREK AFKVQQAREMVLEIIR VLEIIREKDQADFRGV R E M E K D 0 1 0 0 0 0 3 0 0 2 1 1 1 0 0 0 0 0 0 1 0 10 1 1258.6955 Q96I24;A6NJ37;Q96I24-2 Q96I24 226 235 FUBP3 Far upstream element-binding protein 3 yes no 2;3 3.1672E-34 132.32 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 19331000 0 0 0 4548000 0 14783000 2031 1394 2058 9121;9122 6067;6068 6068 2 ENAGEDPGLAR HEASAAQKENAGEDPG GEDPGLARQAPKPRKQ K E N A R Q 2 1 1 1 0 0 2 2 0 0 1 0 0 0 1 0 0 0 0 0 0 11 0 1127.5207 P81605;P81605-2 P81605 43 53 DCD Dermcidin;Survival-promoting peptide;DCD-1 no no 2 9.3508E-13 115 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 85631000 7165800 25154000 26732000 4075700 6924500 15579000 2032 1013;1014 2059 9123;9124;9125;9126;9127;9128 6069;6070;6071;6072 6070 4 ENAGEDPGLARQAPKPR HEASAAQKENAGEDPG ARQAPKPRKQRSSLLE K E N P R K 3 2 1 1 0 1 2 2 0 0 1 1 0 0 3 0 0 0 0 0 0 17 2 1804.918 P81605;P81605-2 P81605 43 59 DCD Dermcidin;Survival-promoting peptide;DCD-1 no no 4 0.010794 41.743 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 23852000 870910 11344000 3748900 1000400 2936100 3951900 2033 1013;1014 2060 9129;9130;9131;9132;9133;9134 6073 6073 1 ENCISGPVKATAPVGGPK ________________ TAPVGGPKRVLVTQQF K E N P K R 2 0 1 0 1 0 1 3 0 1 0 2 0 0 3 1 1 0 0 2 0 18 1 1780.9142 O14965;A3KFJ0;Q5QPD4;A3KFJ1;Q5QPD2;Q5QPD1;A3KFJ2 O14965 6 23 AURKA Aurora kinase A yes no 2;3 3.0278E-58 122.44 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 2 2 162430000 13675000 45653000 25426000 10603000 12131000 54941000 2034 698 2061 9135;9136;9137;9138;9139;9140;9141;9142;9143 6074;6075;6076;6077;6078;6079;6080 6077 7 ENECDPEEDLGK QGVKGQSKENECDPEE DPEEDLGKCESDNTTN K E N G K C 0 0 1 2 1 0 4 1 0 0 1 1 0 0 1 0 0 0 0 0 0 12 0 1433.5617 O94782 O94782 373 384 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 2 0.016722 53.448 By matching By MS/MS By matching By matching By matching By matching 1 945710 0 945710 0 0 0 0 2035 755 2062 9144 6081 6081 1 ENEFSFEDNAIRGGK KDSRAIIRENEFSFED DNAIRGGKKASRMKKE R E N G K K 1 1 2 1 0 0 3 2 0 1 0 1 0 2 0 1 0 0 0 0 0 15 1 1711.7802 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 792 806 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.00082911 76.759 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 4147200 0 0 0 0 0 4147200 2036 486 2063 9145;9146 6082;6083;6084 6082 3 ENEVEEVKEEGPK PVADTENKENEVEEVK EVKEEGPKEMTLDEWK K E N P K E 0 0 1 0 0 0 6 1 0 0 0 2 0 0 1 0 0 0 0 2 0 13 1 1514.71 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51 274 286 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein no no 2;3 0.0011282 86.738 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 2 1 1 2 18775000 1049300 3654100 2392400 956570 1380900 9341700 2037 1316;1317 2064 9147;9148;9149;9150;9151;9152;9153;9154 6085;6086;6087;6088;6089 6085 5 ENGFSSPPQIK DAKIKKEKENGFSSPP FSSPPQIKDEPEDDGY K E N I K D 0 0 1 0 0 1 1 1 0 1 0 1 0 1 2 2 0 0 0 0 0 11 0 1202.5932 P11387 P11387 107 117 TOP1 DNA topoisomerase 1 yes yes 2 0.0085141 66.989 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 6663300 1278300 1216600 0 0 2915200 1253300 2038 825 2065 9155;9156;9157;9158 6090 6090 1 ENGQPQNCGGQWR SQRGYGARENGQPQNC QNCGGQWRTGSSQSSC R E N W R T 0 1 2 0 1 3 1 3 0 0 0 0 0 0 1 0 0 1 0 0 0 13 0 1529.643 Q5D862;CON__Q5D862 Q5D862 359 371 FLG2 Filaggrin-2 yes no 2 0.029485 44.829 By matching By matching By matching By matching By matching By MS/MS 1 1 1259400 0 0 448420 0 0 811020 + 2039 306 2066 9159;9160 6091 6091 1 ENIELKENDEK ERPFETYKENIELKEN ELKENDEKMKAMKRSR K E N E K M 0 0 2 1 0 0 4 0 0 1 1 2 0 0 0 0 0 0 0 0 0 11 1 1359.6518 P46013;F5H4V4;P46013-2 P46013 934 944 MKI67 Antigen KI-67 no no 2;3 1.0729E-08 112.84 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 3 2 2 2 2 27167000 1619100 6216400 7171000 1315500 3215400 7629700 2040 919;920 2067 9161;9162;9163;9164;9165;9166;9167;9168;9169;9170;9171;9172 6092;6093;6094;6095;6096;6097 6095 6 ENIELKENDEKMK ERPFETYKENIELKEN KENDEKMKAMKRSRTW K E N M K A 0 0 2 1 0 0 4 0 0 1 1 3 1 0 0 0 0 0 0 0 0 13 2 1618.7872 P46013;F5H4V4;P46013-2 P46013 934 946 MKI67 Antigen KI-67 no no 3 0.029289 56.205 By matching By matching By matching By matching By matching By MS/MS 1 2553600 0 0 0 0 0 2553600 2041 919;920 2068 9173 6098 6098 1 ENINDEPVDMSAR RTAGRPGKENINDEPV EPVDMSARRSEPERGR K E N A R R 1 1 2 2 0 0 2 0 0 1 0 0 1 0 1 1 0 0 0 1 0 13 0 1488.6515 Q8WXI9 Q8WXI9 98 110 GATAD2B Transcriptional repressor p66-beta yes yes 2 0.038833 41.621 By matching By matching By MS/MS By matching By matching By matching 1 1 1 5451700 0 1586700 1053600 0 0 2811400 2042 1344 2069 9174;9175;9176 6099 6099 1 ENINDEPVDMSARR RTAGRPGKENINDEPV PVDMSARRSEPERGRL K E N R R S 1 2 2 2 0 0 2 0 0 1 0 0 1 0 1 1 0 0 0 1 0 14 1 1644.7526 Q8WXI9 Q8WXI9 98 111 GATAD2B Transcriptional repressor p66-beta yes yes 2;3 0.00085777 67.997 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 2 18896000 0 5994000 3224900 0 0 9676800 2043 1344 2070 9177;9178;9179;9180;9181;9182 6100;6101;6102 6102 3 ENKTIVFVETK MEEIMSEKENKTIVFV TIVFVETKRRCDELTR K E N T K R 0 0 1 0 0 0 2 0 0 1 0 2 0 1 0 0 2 0 0 2 0 11 1 1306.7133 P17844;E7ETL9 P17844 341 351 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 2;3 0.023773 58.781 By matching By matching By matching By matching By matching By MS/MS 1 1 2 2 8157200 0 1570100 1026200 0 1764200 3796800 2044 853 2071 9183;9184;9185;9186;9187;9188 6103;6104 6103 2 ENLAESSKPTAGGSR LSPLSLGKENLAESSK KPTAGGSRSQKVKVAQ K E N S R S 2 1 1 0 0 0 2 2 0 0 1 1 0 0 1 3 1 0 0 0 0 15 1 1502.7325 P49454 P49454 3126 3140 CENPF Centromere protein F yes yes 3 0.00066969 74.475 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 3401800 0 625880 738570 0 517390 1520000 2045 936 2072 9189;9190;9191;9192 6105;6106 6105 2 ENLCSTFCK NMAINPSKENLCSTFC NLCSTFCKEVVRNANE K E N C K E 0 0 1 0 2 0 1 0 0 0 1 1 0 1 0 1 1 0 0 0 0 9 0 1157.4845 CON__P02663 CON__P02663 33 41 yes yes 2 0.0070183 98.048 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 66718000 9254900 15643000 7171300 4533600 12698000 17417000 + 2046 289 2073 9193;9194;9195;9196;9197;9198;9199 6107;6108;6109;6110;6111;6112;6113 6110 7 ENNENSNSNSHNPLNGSGK RAAEAKERENNENSNS NPLNGSGKSVLGSSED R E N G K S 0 0 7 0 0 0 2 2 1 0 1 1 0 0 1 4 0 0 0 0 0 19 0 2011.858 Q9NPC8 Q9NPC8 188 206 SIX2 Homeobox protein SIX2 yes yes 3 0.014847 38.227 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 3487600 0 708270 1003500 0 340460 1435300 2047 1525 2074 9200;9201;9202;9203 6114;6115 6114 2 ENPVKGSPGVPSFAAGPPISEGK YPVGYFTKENPVKGSP GPPISEGKYFSSNPII K E N G K Y 2 0 1 0 0 0 2 4 0 1 0 2 0 1 5 3 0 0 0 2 0 23 1 2221.1379 Q2L6G8;Q15517;G8JLG2 Q2L6G8 327 349 CDSN Corneodesmosin yes no 3 3.0823E-10 80.002 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 135150000 0 18887000 53193000 58576000 4490500 0 2048 601 2075 9204;9205;9206;9207 6116;6117;6118;6119 6118 4 ENQIPEEAGSSGLGK LSPKDSEKENQIPEEA AGSSGLGKAKRKACPL K E N G K A 1 0 1 0 0 1 3 3 0 1 1 1 0 0 1 2 0 0 0 0 0 15 0 1514.7213 Q15004;H0YMA4;H0YKX3 Q15004 79 93 KIAA0101 PCNA-associated factor yes no 2 0.00045512 71.529 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 92544000 1570100 20101000 13384000 2179500 7293500 48015000 2049 1124 2076 9208;9209;9210;9211;9212;9213;9214 6120;6121;6122;6123;6124 6120 5 ENQIPEEAGSSGLGKAK LSPKDSEKENQIPEEA SSGLGKAKRKACPLQP K E N A K R 2 0 1 0 0 1 3 3 0 1 1 2 0 0 1 2 0 0 0 0 0 17 1 1713.8533 Q15004;H0YMA4;H0YKX3 Q15004 79 95 KIAA0101 PCNA-associated factor yes no 2;3 3.2038E-182 160.04 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 2 65507000 1897400 19171000 11274000 3489200 5672100 24003000 2050 1124 2077 9215;9216;9217;9218;9219;9220;9221;9222;9223;9224;9225 6125;6126;6127;6128;6129;6130;6131 6127 7 ENRNHLLPDIVTCVQSSRK VKVFNVTKENRNHLLP TCVQSSRK________ K E N R K - 0 2 2 1 1 1 1 0 1 1 2 1 0 0 1 2 1 0 0 2 0 19 2 2265.1648 Q9BSD7 Q9BSD7 172 190 NTPCR Cancer-related nucleoside-triphosphatase yes yes 4 2.198E-10 90.718 By matching By matching By matching By matching By matching By MS/MS 1 10108000 0 0 0 0 0 10108000 2051 1444 2078 9226 6132 6132 1 ENTDSVVMQPK NPKPHKGKENTDSVVM DSVVMQPKRKHFIKDI K E N P K R 0 0 1 1 0 1 1 0 0 0 0 1 1 0 1 1 1 0 0 2 0 11 0 1246.5864 Q03701;F5H3Y6 Q03701 771 781 CEBPZ CCAAT/enhancer-binding protein zeta yes no 2 0.019417 56.205 By matching By matching By matching By matching By matching By MS/MS 1 1 1592100 0 285180 0 0 0 1306900 2052 1037 2079 9227;9228 6133 6133 1 ENVLQYCR ELDVKSQKENVLQYCR ENVLQYCRKSGLQTDY K E N C R K 0 1 1 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 8 0 1080.5022 P46013;F5H4V4 P46013 255 262 MKI67 Antigen KI-67 yes no 2 0.02572 95.741 By matching By matching By matching By matching By matching By MS/MS 1 1 1917000 0 0 0 0 409720 1507300 2053 919 2080 9229;9230 6134 6134 0 ENVLQYCRK ELDVKSQKENVLQYCR NVLQYCRKSGLQTDYA K E N R K S 0 1 1 0 1 1 1 0 0 0 1 1 0 0 0 0 0 0 1 1 0 9 1 1208.5972 P46013;F5H4V4 P46013 255 263 MKI67 Antigen KI-67 yes no 3 0.004218 87.696 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 17451000 0 5082500 2240400 1005900 2818600 6303700 2054 919 2081 9231;9232;9233;9234;9235 6135;6136;6137;6138 6135 4 ENVNATENCISAVGK QSADSKTKENVNATEN NCISAVGKIMKFKPDC K E N G K I 2 0 3 0 1 0 2 1 0 1 0 1 0 0 0 1 1 0 0 2 0 15 0 1604.7464 B4E0R6;O00410-2;O00410;H0Y8C6;O00410-3 B4E0R6 839 853 IPO5 Importin-5 yes no 2 0.0035326 65.231 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 722630 722630 0 0 0 0 0 2055 155 2082 9236;9237 6139;6140 6140 2 ENVSVSVQPGSSSVSRAGSLHK KQAEKLSKENVSVSVQ SRAGSLHKSTALPEEK K E N H K S 1 1 1 0 0 1 1 2 1 0 1 1 0 0 1 7 0 0 0 4 0 22 1 2211.1244 F5H1N7;Q6ZU35 F5H1N7 1118 1139 KIAA1211 Uncharacterized protein KIAA1211 yes no 4 0.012434 38.721 By matching By matching By MS/MS By matching By matching By matching 1 1 1092900 0 0 803220 289690 0 0 2056 510 2083 9238;9239 6141 6141 1 ENVVQKTPVVQNAASIVQPSPAHVGQQGLSK LRQSQLQKENVVQKTP VGQQGLSKLPSRPGAQ K E N S K L 3 0 2 0 0 5 1 2 1 1 1 2 0 0 3 3 1 0 0 6 0 31 1 3209.7157 Q8WXI9 Q8WXI9 194 224 GATAD2B Transcriptional repressor p66-beta yes yes 4 0.00034724 43.92 By matching By MS/MS By matching By matching By matching By matching 1 6875300 0 6875300 0 0 0 0 2057 1344 2084 9240 6142 6142 0 ENYDRGYSSLLK GFNTFRDRENYDRGYS RGYSSLLKRDFGAKTQ R E N L K R 0 1 1 1 0 0 1 1 0 0 2 1 0 0 0 2 0 0 2 0 0 12 1 1443.6994 P17844;E7ETL9 P17844 512 523 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 2;3 0.0047244 77.124 By matching By MS/MS By matching By matching By MS/MS By MS/MS 2 2 1 1 2 2 34667000 2041000 5925000 903070 1245100 7694500 16859000 2058 853 2085 9241;9242;9243;9244;9245;9246;9247;9248;9249;9250 6143;6144;6145;6146 6144 4 EPEVELHPLSR SLEAEKTREPEVELHP VELHPLSRDSKITSWK R E P S R D 0 1 0 0 0 0 3 0 1 0 2 0 0 0 2 1 0 0 0 1 0 11 0 1304.6725 Q8ND61-2;Q8ND61 Q8ND61-2 758 768 C3orf20 Uncharacterized protein C3orf20 yes no 2 0.0021961 88.596 By matching By MS/MS By matching By matching By matching By matching 1 1 1 8070600 0 1263900 0 1245000 0 5561700 2059 1319 2086 9251;9252;9253 6147 6147 1 EPFTIAQGK MQVSSLQREPFTIAQG PFTIAQGKGQKLCEIE R E P G K G 1 0 0 0 0 1 1 1 0 1 0 1 0 1 1 0 1 0 0 0 0 9 0 989.5182 P35659;D6R9L5;D6RDA2 P35659 76 84 DEK Protein DEK yes no 2 0.040191 59.931 By MS/MS By matching By matching By matching By matching By matching 1 973020 973020 0 0 0 0 0 2060 901 2087 9254 6148 6148 1 EPFTIAQGKGQK MQVSSLQREPFTIAQG IAQGKGQKLCEIERIH R E P Q K L 1 0 0 0 0 2 1 2 0 1 0 2 0 1 1 0 1 0 0 0 0 12 1 1302.6932 P35659;D6R9L5;D6RDA2 P35659 76 87 DEK Protein DEK yes no 2;3 9.3959E-18 115.29 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 49963000 9518200 6517100 6247900 3541900 12150000 11988000 2061 901 2088 9255;9256;9257;9258;9259;9260;9261;9262;9263;9264;9265;9266;9267 6149;6150;6151;6152;6153;6154;6155;6156;6157;6158;6159 6150 11 EPLVATNLPGRGQLQK TSKGDLPREPLVATNL PGRGQLQKLASERNLF R E P Q K L 1 1 1 0 0 2 1 2 0 0 3 1 0 0 2 0 1 0 0 1 0 16 1 1719.9632 P42166 P42166 254 269 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 3 0.0028147 67.019 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 11964000 6955600 0 4311500 696580 0 0 2062 913 2089 9268;9269;9270 6160;6161;6162;6163 6162 4 EPTPVLGSGAAAAGR DFSSDEEREPTPVLGS SGAAAAGRSRAAVGRK R E P G R S 4 1 0 0 0 0 1 3 0 0 1 0 0 0 2 1 1 0 0 1 0 15 0 1352.7048 P42166;P42167;P42167-2;G5E972 P42166 72 86 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2 0.0054977 52.42 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 18054000 0 4946700 3263300 1156700 426700 8260300 2063 913;914 2090 9271;9272;9273;9274;9275 6164 6164 1 EQAEQWLK LVLAVQSKEQAEQWLK EQAEQWLKVIKEAYSG K E Q L K V 1 0 0 0 0 2 2 0 0 0 1 1 0 0 0 0 0 1 0 0 0 8 0 1030.5084 Q8N556;E9PDT7 Q8N556 235 242 AFAP1 Actin filament-associated protein 1 yes no 2 0.02381 76.679 By MS/MS By matching By matching By matching By matching By matching 2 1 2 15729000 3227100 3614100 0 0 8887600 0 2064 423 2091 9276;9277;9278;9279;9280 6165;6166 6166 2 EQCAEENIPASSLNKGK NHEEPRDKEQCAEENI ASSLNKGKKLMHCRSH K E Q G K K 2 0 2 0 1 1 3 1 0 1 1 2 0 0 1 2 0 0 0 0 0 17 1 1873.884 C9J0C6;G5E9X1;B3KQH5;Q9UL03-3;Q9UL03 C9J0C6 349 365 INTS6 Integrator complex subunit 6 yes no 3 0.0092594 44.045 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 9353100 960060 1825200 1718600 1175400 1315700 2358200 2065 71 2092 9281;9282;9283;9284;9285;9286 6167 6167 1 EQCCYNCGKPGHLAR CKEPKREREQCCYNCG GKPGHLARDCDHADEQ R E Q A R D 1 1 1 0 3 1 1 2 1 0 1 1 0 0 1 0 0 0 1 0 0 15 1 1848.7818 B4DP17;P62633-3;P62633-2;P62633;P62633-5;E9PDR7;P62633-4 B4DP17 78 92 CNBP Cellular nucleic acid-binding protein no no 3;4 0.0094191 47.621 By matching By matching By matching By matching By MS/MS By MS/MS 1 2 2 2 1 2 13584000 1371100 2450900 1928500 1125300 2564700 4143300 2066 112;992 2093 9287;9288;9289;9290;9291;9292;9293;9294;9295;9296 6168;6169;6170 6169 3 EQDVEVLEPLK ISEQFRTREQDVEVLE VEVLEPLKCELVSGES R E Q L K C 0 0 0 1 0 1 3 0 0 0 2 1 0 0 1 0 0 0 0 2 0 11 0 1297.6765 Q12830-4;Q12830-2;Q12830 Q12830-4 1449 1459 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 0.0026815 86.288 By matching By MS/MS By matching By matching By matching By matching 1 5043600 0 5043600 0 0 0 0 2067 1061 2094 9297 6171 6171 1 EQDVKSPVPSLRPSSTGPSPSGGLSEEPAAK LAPKPFSKEQDVKSPV LSEEPAAKDLDNRMPG K E Q A K D 2 1 0 1 0 1 3 3 0 0 2 2 0 0 6 7 1 0 0 2 0 31 2 3090.5469 Q9BY89 Q9BY89 74 104 KIAA1671 Uncharacterized protein KIAA1671 yes yes 4 0.024084 24.087 By matching By matching By matching By matching By matching By MS/MS 1 2240800 0 0 0 0 0 2240800 2068 1466 2095 9298 6172 6172 1 EQEAAMEIQEPAANK IESDAPMKEQEAAMEI IQEPAANKSLEKPEGS K E Q N K S 4 0 1 0 0 2 4 0 0 1 0 1 1 0 1 0 0 0 0 0 0 15 0 1657.7618 Q92576-2;Q92576;E7EVH3;E7ER40 Q92576-2 981 995 PHF3 PHD finger protein 3 yes no 2 3.3596E-262 184.01 By matching By MS/MS By matching By matching By MS/MS By MS/MS 2 1 1 8116800 0 3060600 0 0 0 5056300 2069 1353 2096 9299;9300;9301;9302 6173;6174;6175;6176;6177 6174 5 EQEPMPTVDSHEPR ARKAGPAKEQEPMPTV TVDSHEPRLGPRPRSH K E Q P R L 0 1 0 1 0 1 3 0 1 0 0 0 1 0 3 1 1 0 0 1 0 14 0 1650.7308 Q9H910;B4DLH4;H3BU16;Q9H910-2;A6NGP5 Q9H910 153 166 HN1L Hematological and neurological expressed 1-like protein yes no 3 0.015141 45.992 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 3688600 0 0 452570 0 1163700 2072300 2070 98 2097 9303;9304;9305 6178;6179 6178 2 EQESYDNRLLMGDER ELMQQYLKEQESYDNR RLLMGDERVKNGLNFM K E Q E R V 0 2 1 2 0 1 3 1 0 0 2 0 1 0 0 1 0 0 1 0 0 15 1 1853.8214 Q86X95-2;Q86X95;F2Z3Q1 Q86X95-2 49 63 CIR1 Corepressor interacting with RBPJ 1 yes no 3 0.011729 46.41 By matching By matching By matching By matching By matching By MS/MS 1 1 1844400 0 534920 0 0 0 1309500 2071 1270 2098 9306;9307 6180;6181 6180 2 EQESYDNRLLMGDERVK ELMQQYLKEQESYDNR LMGDERVKNGLNFMYE K E Q V K N 0 2 1 2 0 1 3 1 0 0 2 1 1 0 0 1 0 0 1 1 0 17 2 2080.9848 Q86X95-2;Q86X95;F2Z3Q1 Q86X95-2 49 65 CIR1 Corepressor interacting with RBPJ 1 yes no 3 0.033303 42.818 By matching By matching By matching By matching By matching By MS/MS 1 1 1565300 0 0 693610 0 0 871710 2072 1270 2099 9308;9309 6182 6182 1 EQEVPTFTELSRENDEEK VRRGLEGKEQEVPTFT SRENDEEKVTFNLSKG K E Q E K V 0 1 1 1 0 1 6 0 0 0 1 1 0 1 1 1 2 0 0 1 0 18 1 2178.9917 B4DX32;O60870;F5GXB3 B4DX32 185 202 KIN DNA/RNA-binding protein KIN17 yes no 3 1.4257E-59 124.68 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 105840000 18166000 24189000 29488000 13645000 2205600 18150000 2073 136 2100 9310;9311;9312;9313;9314;9315 6183;6184;6185;6186;6187 6184 5 EQFEGLGSTPDAK GSGTSLEREQFEGLGS LGSTPDAKLDKTCISR R E Q A K L 1 0 0 1 0 1 2 2 0 0 1 1 0 1 1 1 1 0 0 0 0 13 0 1377.6412 Q8NCN4 Q8NCN4 546 558 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 2 0.0013462 81.278 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 6985000 360670 1664600 640500 1040500 1328000 1950800 2074 1318 2101 9316;9317;9318;9319;9320;9321 6188;6189 6188 2 EQGIQDPIKGGDVRDK GSGGLGAKEQGIQDPI KGGDVRDKWDQYKGVG K E Q D K W 0 1 0 3 0 2 1 3 0 2 0 2 0 0 1 0 0 0 0 1 0 16 2 1753.8959 Q8IWX8 Q8IWX8 864 879 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 4 0.039696 35.836 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 5436600 0 953780 1049300 1048400 898760 1486400 2075 1281 2102 9322;9323;9324;9325;9326 6190 6190 1 EQGPYETYEGSPVSK EASCDLAKEQGPYETY YEGSPVSKGILQYDMW K E Q S K G 0 0 0 0 0 1 3 2 0 0 0 1 0 0 2 2 1 0 2 1 0 15 0 1669.7471 P23921;H0YFI0;E9PD78;E9PL69;F5H861 P23921 549 563 RRM1 Ribonucleoside-diphosphate reductase large subunit;Ribonucleoside-diphosphate reductase yes no 2 2.5388E-14 106.6 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 35091000 6498100 7493900 3287600 1228400 5557400 11025000 2076 870 2103 9327;9328;9329;9330;9331;9332 6191;6192;6193;6194;6195;6196 6191 6 EQHQHSDLDSNQTHSSGTVTSSSSTANIDDLKK LSQLRESREQHQHSDL ANIDDLKKRLERIKSS R E Q K K R 1 0 2 4 0 3 1 1 3 1 2 2 0 0 0 8 4 0 0 1 0 33 1 3553.6153 Q14008-2;Q14008;Q14008-3 Q14008-2 1930 1962 CKAP5 Cytoskeleton-associated protein 5 yes no 5 4.643E-06 37.105 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 19902000 3346300 2848200 3261800 3943200 3142200 3360000 2077 1093 2104 9333;9334;9335;9336;9337;9338 6197;6198;6199;6200 6200 3 EQILEEFSK SIPKSKTKEQILEEFS QILEEFSKVTEGLTDV K E Q S K V 0 0 0 0 0 1 3 0 0 1 1 1 0 1 0 1 0 0 0 0 0 9 0 1121.5605 O60506-2;O60506;O60506-4;O60506-3;O60506-5 O60506-2 257 265 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 2 0.030918 64.103 By matching By matching By matching By matching By MS/MS By matching 1 3896000 0 0 0 0 3896000 0 2078 731 2105 9339 6201 6201 1 EQITGQIDK PPETQVEKEQITGQID QITGQIDKSTVKPKPQ K E Q D K S 0 0 0 1 0 2 1 1 0 2 0 1 0 0 0 0 1 0 0 0 0 9 0 1030.5295 Q7Z6E9;Q7Z6E9-2;Q7Z6E9-4 Q7Z6E9 1601 1609 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 2 0.015262 76.228 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 5790700 0 1048700 713040 448820 1359700 2220400 2079 1255 2106 9340;9341;9342;9343;9344 6202;6203 6202 2 EQITQHIADLSSK EELEDNEKEQITQHIA HIADLSSKAAGTPKKK K E Q S K A 1 0 0 1 0 2 1 0 1 2 1 1 0 0 0 2 1 0 0 0 0 13 0 1468.7522 P49916-2;P49916 P49916-2 175 187 LIG3 DNA ligase 3 yes no 3 0.016791 48.467 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 3882000 1786300 1828800 266860 0 0 0 2080 947 2107 9345;9346;9347 6204;6205 6205 2 EQIVPKPEEEVAQK IEMILTEKEQIVPKPE PEEEVAQKKKISQKKL K E Q Q K K 1 0 0 0 0 2 4 0 0 1 0 2 0 0 2 0 0 0 0 2 0 14 1 1622.8516 P18621;B4E3C2 P18621 154 167 RPL17 60S ribosomal protein L17 yes no 3 0.0016976 67.952 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 19486000 4694600 2808900 2205200 3457500 574450 5745000 2081 855 2108 9348;9349;9350;9351;9352;9353 6206;6207;6208;6209 6208 4 EQIVPKPEEEVAQKK IEMILTEKEQIVPKPE EEEVAQKKKISQKKLK K E Q K K K 1 0 0 0 0 2 4 0 0 1 0 3 0 0 2 0 0 0 0 2 0 15 2 1750.9465 P18621;B4E3C2 P18621 154 168 RPL17 60S ribosomal protein L17 yes no 3;4 6.5547E-05 89.507 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 2 2 1 2 1 31372000 7581700 0 5269600 2395700 13803000 2321600 2082 855 2109 9354;9355;9356;9357;9358;9359;9360;9361 6210;6211;6212;6213;6214;6215 6213 6 EQLDNQLDAYMSK LARPVLTKEQLDNQLD QLDAYMSKTKGHLDAE K E Q S K T 1 0 1 2 0 2 1 0 0 0 2 1 1 0 0 1 0 0 1 0 0 13 0 1553.7032 Q9Y3Y2-4;Q9Y3Y2;Q9Y3Y2-3 Q9Y3Y2-4 168 180 CHTOP Chromatin target of PRMT1 protein yes no 2 1.4502E-46 127.36 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 36602000 0 7516700 13310000 12492000 3282900 0 2083 1649 2110 9362;9363;9364;9365 6216;6217;6218;6219 6217 3 EQLQSVTTNSGYTR TVPYEVDKEQLQSVTT TTNSGYTRLSDVDANT K E Q T R L 0 1 1 0 0 2 1 1 0 0 1 0 0 0 0 2 3 0 1 1 0 14 0 1582.7587 Q12888;Q12888-2;A6NNK5;F8VY86;C9JXV0 Q12888 193 206 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.001007 85.45 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 2907600 0 0 1209700 662230 768940 266690 2084 1063 2111 9366;9367;9368;9369 6220;6221 6220 2 EQLQSVTTNSGYTRLSDVDANTAIK TVPYEVDKEQLQSVTT VDANTAIKHEEQSNED K E Q I K H 2 1 2 2 0 2 1 1 0 1 2 1 0 0 0 3 4 0 1 2 0 25 1 2710.341 Q12888;Q12888-2;A6NNK5;F8VY86;C9JXV0 Q12888 193 217 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 1.1708E-08 62.589 By matching By MS/MS By matching By matching By matching By matching 1 8920200 0 8920200 0 0 0 0 2085 1063 2112 9370 6222 6222 1 EQLSAERQEQIKQR ISAMKEEKEQLSAERQ RQEQIKQRTKLELKAK K E Q Q R T 1 2 0 0 0 4 3 0 0 1 1 1 0 0 0 1 0 0 0 0 0 14 2 1741.9071 Q9UQE7 Q9UQE7 289 302 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3;4 7.744E-05 93.766 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 1 1 2 23781000 1657100 5046500 1985400 1078700 4290500 9722600 2086 1625 2113 9371;9372;9373;9374;9375;9376;9377;9378;9379;9380 6223;6224;6225;6226;6227;6228 6227 6 EQNLSSQVECLELEK DQEACKAKEQNLSSQV VECLELEKAQLLQGLD K E Q E K A 0 0 1 0 1 2 4 0 0 0 3 1 0 0 0 2 0 0 0 1 0 15 0 1804.8513 P49454 P49454 2564 2578 CENPF Centromere protein F yes yes 2 1.4151E-05 91.355 By matching By MS/MS By matching By matching By matching By matching 1 1 20124000 0 17880000 0 2244000 0 0 2087 936 2114 9381;9382 6229 6229 1 EQNSPIYISR GFNIMGGKEQNSPIYI NSPIYISRIIPGGIAD K E Q S R I 0 1 1 0 0 1 1 0 0 2 0 0 0 0 1 2 0 0 1 0 0 10 0 1205.6041 G3V1D4;Q9NUP9;O14910;H0YI92;H0YIA8;Q9HAP6 G3V1D4 88 97 LIN7C;LIN7A;LIN7B Protein lin-7 homolog C;Protein lin-7 homolog A;Protein lin-7 homolog B yes no 2 0.019616 63.944 By matching By matching By matching By matching By matching By MS/MS 1 1 1352200 0 565450 0 0 0 786780 2088 575 2115 9383;9384 6230 6230 1 EQPPRFAQPGSFEYEYAMR NQQFHKEREQPPRFAQ FEYEYAMRWKALIEME R E Q M R W 2 2 0 0 0 2 3 1 0 0 0 0 1 2 3 1 0 0 2 0 0 19 1 2302.0477 Q15233;F5GYZ3;C9JYS8;H7C367 Q15233 252 270 NONO Non-POU domain-containing octamer-binding protein yes no 3 0.012619 62.94 By matching By MS/MS By matching By matching By matching By matching 1 5788600 0 5788600 0 0 0 0 2089 1133 2116 9385 6231 6231 141 1 EQPQLTSTCHIAISNSENLLGK EMFKTPVKEQPQLTST NSENLLGKQFQGTDSG K E Q G K Q 1 0 2 0 1 2 2 1 1 2 3 1 0 0 1 3 2 0 0 0 0 22 0 2439.2064 P46013;F5H4V4;P46013-2;E7EN66 P46013 765 786 MKI67 Antigen KI-67 no no 3 6.1316E-10 85.969 By matching By MS/MS By matching By matching By matching By matching 1 110680000 0 110680000 0 0 0 0 2090 919;920 2117 9386 6232 6232 1 EQPQPSGKQESGSEIHVEVK PVLKKIIKEQPQPSGK SEIHVEVKAQSLVISP K E Q V K A 0 0 0 0 0 3 4 2 1 1 0 2 0 0 2 3 0 0 0 2 0 20 1 2192.0709 P46013;F5H4V4;P46013-2;E7EN66 P46013 553 572 MKI67 Antigen KI-67 no no 3;4 2.0862E-06 84.249 By matching By MS/MS By matching By matching By MS/MS By matching 2 1 2 1 29292000 0 19024000 4949100 0 4586400 732850 2091 919;920 2118 9387;9388;9389;9390;9391;9392 6233;6234;6235 6234 3 EQQCVVMAENSK RAFQYHSKEQQCVVMA VVMAENSKNTPVFRMR K E Q S K N 1 0 1 0 1 2 2 0 0 0 0 1 1 0 0 1 0 0 0 2 0 12 0 1421.6279 CON__P06868 CON__P06868 77 88 yes yes 2 0.0018034 83.692 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 24018000 4875200 1378600 2776500 4036100 7168100 3783000 + 2092 295 2119 9393;9394;9395;9396;9397;9398 6236;6237;6238;6239;6240 6237 5 EQQLLSTLK LEESVSEKEQQLLSTL QQLLSTLKCQDEELEK K E Q L K C 0 0 0 0 0 2 1 0 0 0 3 1 0 0 0 1 1 0 0 0 0 9 0 1058.5972 O95239;O95239-2;F5H4Q9 O95239 956 964 KIF4A Chromosome-associated kinesin KIF4A yes no 2 0.022125 68.657 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5813400 0 1637000 499930 0 636300 3040300 2093 768 2120 9399;9400;9401;9402 6241 6241 1 EQQLLSTLKCQDEELEK LEESVSEKEQQLLSTL CQDEELEKMREVCEQN K E Q E K M 0 0 0 1 1 3 4 0 0 0 4 2 0 0 0 1 1 0 0 0 0 17 1 2090.0201 O95239;O95239-2;F5H4Q9 O95239 956 972 KIF4A Chromosome-associated kinesin KIF4A yes no 3 2.4305E-181 155.37 By matching By MS/MS By matching By matching By matching By matching 1 63308000 0 63308000 0 0 0 0 2094 768 2121 9403 6242 6242 1 EQQSNIAVFQGK WEASRRRKEQQSNIAV NIAVFQGKKITFDD__ K E Q G K K 1 0 1 0 0 3 1 1 0 1 0 1 0 1 0 1 0 0 0 1 0 12 0 1347.6783 Q8NEF9 Q8NEF9 412 423 SRFBP1 Serum response factor-binding protein 1 yes yes 2 3.9776E-07 101.71 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 8025700 657950 987940 1085200 823160 1988000 2483500 2095 1322 2122 9404;9405;9406;9407;9408;9409 6243;6244;6245 6244 3 EQSQPCADNAVLSSGLTAAR PYFYPVVKEQSQPCAD SSGLTAAR________ K E Q A R - 4 1 1 1 1 2 1 1 0 0 2 0 0 0 1 3 1 0 0 1 0 20 0 2073.9749 H3BV19;H3BSA1;P19784 H3BV19 133 152 CSNK2A2 Casein kinase II subunit alpha yes no 2 0.0036524 47.016 By matching By MS/MS By matching By matching By matching By matching 1 1 2742100 0 1983100 0 758970 0 0 2096 647 2123 9410;9411 6246 6246 1 EQSTRSSGHSSSELSPDAVEK TDPSLDMKEQSTRSSG LSPDAVEKAGMSSNQS K E Q E K A 1 1 0 1 0 1 3 1 1 0 1 1 0 0 1 7 1 0 0 1 0 21 1 2217.0145 Q9UQ35;F5GWZ7;Q9UQ35-2;I3L2L6 Q9UQ35 1373 1393 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3;4 9.9618E-05 58.93 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 2 2 2 12202000 1217400 4144200 3108200 0 1387800 2344000 2097 1623 2124 9412;9413;9414;9415;9416;9417;9418;9419;9420;9421 6247;6248;6249 6249 3 EQSVQEIPVSR GAHNEKVREQSVQEIP VQEIPVSRLFREPSQA R E Q S R L 0 1 0 0 0 2 2 0 0 1 0 0 0 0 1 2 0 0 0 2 0 11 0 1270.6517 CON__P06868 CON__P06868 648 658 yes yes 2 0.0057012 71.176 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 10090000 1117100 1557000 1019800 853450 1975400 3567700 + 2098 295 2125 9422;9423;9424;9425;9426;9427 6250;6251;6252;6253 6252 4 EQTFSGGTSQDTK DNQGDEAKEQTFSGGT GGTSQDTKASESSKPW K E Q T K A 0 0 0 1 0 2 1 2 0 0 0 1 0 1 0 2 3 0 0 0 0 13 0 1384.6107 Q9Y2W1 Q9Y2W1 203 215 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.0022321 68.277 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 6783200 682430 1942400 3274600 645780 237980 0 2099 1639 2126 9428;9429;9430;9431;9432 6254;6255 6255 2 EQVANSAFVER YYITGESKEQVANSAF ANSAFVERVRKRGFEV K E Q E R V 2 1 1 0 0 1 2 0 0 0 0 0 0 1 0 1 0 0 0 2 0 11 0 1248.6099 P08238;H0Y6E4;E9PHI1;Q58FF7 P08238 492 502 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 yes no 2 0.010215 64.64 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 5264900 827790 614880 0 631410 1400400 1790500 2100 805 2127 9433;9434;9435;9436;9437 6256 6256 1 EQVSPLETTLEK YREIKDAKEQVSPLET PLETTLEKFQQEKEEL K E Q E K F 0 0 0 0 0 1 3 0 0 0 2 1 0 0 1 1 2 0 0 1 0 12 0 1372.7086 Q92878-2;Q92878;Q92878-3 Q92878-2 916 927 RAD50 DNA repair protein RAD50 yes no 2 0.0044546 65.043 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 6419000 0 0 0 1559400 0 4859600 2101 1362 2128 9438;9439 6257;6258 6258 2 ERALQGSLGGVEK TVQKLEEKERALQGSL GSLGGVEKELTLRSQA K E R E K E 1 1 0 0 0 1 2 3 0 0 2 1 0 0 0 1 0 0 0 1 0 13 1 1342.7205 O75150-4;H3BP71;O75150;F8W8Z4;F6SYU7;Q6ZN99 O75150-4 735 747 RNF40 E3 ubiquitin-protein ligase BRE1B yes no 3 0.012497 53.3 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4126400 0 1015600 1170300 266150 0 1674300 2102 634 2129 9440;9441;9442;9443 6259 6259 1 ERCLGPPTTPGPYR AAQAPCPRERCLGPPT PTTPGPYRSIYFSSPK R E R Y R S 0 2 0 0 1 0 1 2 0 0 1 0 0 0 4 0 2 0 1 0 0 14 1 1599.7828 G5E9E2;Q5J9I4;P29372-2;P29372;A2IDA3 G5E9E2 42 55 MPG DNA-3-methyladenine glycosylase yes no 3 1.313E-41 119.25 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 42594000 369610 7930600 0 0 10170000 24123000 2103 594 2130 9444;9445;9446;9447 6260;6261;6262 6261 3 ERDQGGFGDRNEYGSR EMVMDILRERDQGGFG DRNEYGSRIGGGIDVP R E R S R I 0 3 1 2 0 1 2 4 0 0 0 0 0 1 0 1 0 0 1 0 0 16 2 1841.8041 Q92945-2;Q92945;E7EP96 Q92945-2 305 320 KHSRP Far upstream element-binding protein 2 yes no 4 4.4113E-12 100.18 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 85329000 2656500 12600000 7776000 5644900 14041000 42611000 2104 1366 2131 9448;9449;9450;9451;9452;9453 6263;6264;6265;6266;6267 6266 5 ERENNENSNSNSHNPLNGSGK RDRAAEAKERENNENS NPLNGSGKSVLGSSED K E R G K S 0 1 7 0 0 0 3 2 1 0 1 1 0 0 1 4 0 0 0 0 0 21 1 2297.0017 Q9NPC8 Q9NPC8 186 206 SIX2 Homeobox protein SIX2 yes yes 4 1.2795E-05 63.488 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 9393000 370920 2012500 2243000 536790 791480 3438300 2105 1525 2132 9454;9455;9456;9457;9458;9459 6268;6269;6270 6270 3 ERGDQTVLILHAK EAMRNYLKERGDQTVL TVLILHAKVAQKSYGN K E R A K V 1 1 0 1 0 1 1 1 1 1 2 1 0 0 0 0 1 0 0 1 0 13 1 1478.8205 Q06330;D6R927;Q06330-5;Q06330-4;Q06330-6;Q06330-7;D6RBQ8;D6RA45;D6RCM1;D6R946;D6RB37;D6REP3;D6RF98;D6RIV8;D6RAT2;D6RIZ8;D6R9X3;D6R9K5;D6REC2 Q06330 42 54 RBPJ Recombining binding protein suppressor of hairless yes no 3 0.0058853 60.196 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 8854200 0 0 1920500 1461600 1827900 3644300 2106 1042 2133 9460;9461;9462;9463 6271 6271 1 ERHIDALEDK EKTQRFLKERHIDALE HIDALEDKIDEEVRRF K E R D K I 1 1 0 2 0 0 2 0 1 1 1 1 0 0 0 0 0 0 0 0 0 10 1 1224.6099 P49959-2;F8W7U8;P49959;B3KTC7 P49959-2 487 496 MRE11A Double-strand break repair protein MRE11A yes no 3 0.02 63.944 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 2137700 0 479880 214060 210410 536880 696510 2107 558 2134 9464;9465;9466;9467;9468 6272 6272 1 ERLPTTAQQEDPEK GLEALRQRERLPTTAQ AQQEDPEKIQVQLCFK R E R E K I 1 1 0 1 0 2 3 0 0 0 1 1 0 0 2 0 2 0 0 0 0 14 1 1640.8006 Q4VC44-2;Q4VC44;Q4VC44-3;I3L287;Q4VC44-5;Q4VC44-4;I3L1A7;I3L188 Q4VC44-2 671 684 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 yes no 3 0.0011279 74.966 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 7488900 0 1531200 1425600 0 1334900 3197200 2108 1171 2135 9469;9470;9471;9472 6273;6274;6275;6276 6276 3 ERPEGETGDLGK PLDGQEHRERPEGETG GETGDLGKREDVKGDR R E R G K R 0 1 0 1 0 0 3 3 0 0 1 1 0 0 1 0 1 0 0 0 0 12 1 1286.6103 Q12873;E9PG89 Q12873 1663 1674 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 2 0.0049112 85.45 By matching By matching By MS/MS By matching By matching By matching 1 1 1 4609100 0 1421800 2281600 0 0 905700 2109 430 2136 9473;9474;9475 6277 6277 1 ERPVQLGGVEQR VEPSTLPRERPVQLGG QLGGVEQRRRSLKEMP R E R Q R R 0 2 0 0 0 2 2 2 0 0 1 0 0 0 1 0 0 0 0 2 0 12 1 1366.7317 Q9BY89 Q9BY89 1235 1246 KIAA1671 Uncharacterized protein KIAA1671 yes yes 3 0.012101 57.434 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 8402500 3392000 0 446710 2879700 0 1684100 2110 1466 2137 9476;9477;9478;9479 6278 6278 1 ERSGVSLAALKK TKAVAASKERSGVSLA VSLAALKKALAAAGYD K E R K K A 2 1 0 0 0 0 1 1 0 0 2 2 0 0 0 2 0 0 0 1 0 12 2 1257.7405 P16403;P10412;P16402 P10412 53 64 HIST1H1C;HIST1H1E;HIST1H1D Histone H1.2;Histone H1.4;Histone H1.3 no no 3 0.011072 69.352 By MS/MS By matching By matching By matching By matching By matching 1 1928600 1928600 0 0 0 0 0 2111 818;843 2138 9480 6279 6279 1 ERSSLLASRYDSPINSASHIPSSK EEMEKESRERSSLLAS ASHIPSSKTASLPGYG R E R S K T 2 2 1 1 0 0 1 0 1 2 2 1 0 0 2 8 0 0 1 0 0 24 2 2601.3147 O14639-4;O14639-3;O14639-5;Q5JVV3;H0Y3K7;F8WAB1;Q5T6N2;F8WAB0;O14639-2;F8W8M4;A6NKJ2;O14639;Q5T6N4;A6NCD9 O14639-4 252 275 ABLIM1 Actin-binding LIM protein 1 yes no 4 0.00034916 53.454 By matching By matching By MS/MS By matching By matching By matching 1 3239900 0 0 3239900 0 0 0 2112 13 2139 9481 6280 6280 1 ERTEEPMETEPK KVEKAEVKERTEEPME EPMETEPKGAADVEKV K E R P K G 0 1 0 0 0 0 5 0 0 0 0 1 1 0 2 0 2 0 0 0 0 12 1 1474.661 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1599 1610 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.0020566 76.326 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 4975600 0 1037800 837770 0 0 3100000 2113 486 2140 9482;9483;9484 6281;6282;6283 6282 3 ERTEEPMETEPKGAADVEK KVEKAEVKERTEEPME KGAADVEKVEEKSAID K E R E K V 2 1 0 1 0 0 6 1 0 0 0 2 1 0 2 0 2 0 0 1 0 19 2 2144.9896 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1599 1617 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3;4 1.2258E-25 101.28 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 2 1 2 39890000 474060 10781000 12810000 387330 0 15438000 2114 486 2141 9485;9486;9487;9488;9489;9490;9491;9492 6284;6285;6286;6287;6288;6289 6285 6 ERYVEVVPCSTEEMSR RCHKKVMKERYVEVVP CSTEEMSRVLMGGTLG K E R S R V 0 2 0 0 1 0 4 0 0 0 0 0 1 0 1 2 1 0 1 3 0 16 1 1969.8874 Q9H6T0-2;Q9H6T0 Q9H6T0-2 535 550 ESRP2 Epithelial splicing regulatory protein 2 yes no 3 0.027891 39.338 By matching By MS/MS By matching By matching By matching By matching 1 1 1 3359200 0 1191100 1436900 731200 0 0 2115 1498 2142 9493;9494;9495 6290 6290 1 ESAAHDYTLRELK VMRVRNVKESAAHDYT DYTLRELKLSKVGQAL K E S L K L 2 1 0 1 0 0 2 0 1 0 2 1 0 0 0 1 1 0 1 0 0 13 1 1531.7631 Q06124;Q06124-2;Q06124-3 Q06124 390 402 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes no 3 1.1765E-15 110.98 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 20458000 2348100 2873000 2069900 1671100 3733500 7762600 2116 1040 2143 9496;9497;9498;9499;9500;9501;9502 6291;6292;6293;6294;6295;6296 6294 6 ESADGLQGETQLLVSR QTDYATEKESADGLQG ETQLLVSRKSRPKSGG K E S S R K 1 1 0 1 0 2 2 2 0 0 3 0 0 0 0 2 1 0 0 1 0 16 0 1701.8533 P46013;F5H4V4 P46013 275 290 MKI67 Antigen KI-67 yes no 2 0.00026101 84.375 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 36648000 0 29824000 0 6824700 0 0 2117 919 2144 9503;9504 6297;6298 6297 2 ESADGLQGETQLLVSRK QTDYATEKESADGLQG TQLLVSRKSRPKSGGS K E S R K S 1 1 0 1 0 2 2 2 0 0 3 1 0 0 0 2 1 0 0 1 0 17 1 1829.9483 P46013;F5H4V4 P46013 275 291 MKI67 Antigen KI-67 yes no 2;3 1.844E-73 126.16 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 263480000 50061000 89476000 86892000 26768000 6179300 4106500 2118 919 2145 9505;9506;9507;9508;9509;9510;9511 6299;6300;6301;6302;6303;6304;6305;6306;6307 6306 9 ESAIVSRPLNPFTAK HVRGFLEKESAIVSRP PLNPFTAKALSGTSPD K E S A K A 2 1 1 0 0 0 1 0 0 1 1 1 0 1 2 2 1 0 0 1 0 15 1 1628.8886 Q9Y314 Q9Y314 118 132 NOSIP Nitric oxide synthase-interacting protein yes yes 2;3 0 185.86 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 1 1 189130000 60791000 0 50545000 64057000 13734000 0 2119 1642 2146 9512;9513;9514;9515;9516;9517;9518;9519;9520 6308;6309;6310;6311;6312;6313;6314;6315;6316 6314 9 ESAQAIEDLAGFKDPAAGHTEESMTDDK RRRPRAPRESAQAIED EESMTDDKTTKIPCKS R E S D K T 5 0 0 4 0 1 4 2 1 1 1 2 1 1 1 2 2 0 0 0 0 28 1 2962.3138 P46013;F5H4V4;P46013-2 P46013 2792 2819 MKI67 Antigen KI-67 no no 3;4 1.597E-30 88.709 By matching By matching By MS/MS By matching By matching By MS/MS 1 2 65614000 0 0 20324000 0 0 45290000 2120 919;920 2147 9521;9522;9523 6317;6318;6319 6317 3 ESDCHYLEAR CKPHHQFKESDCHYLE DCHYLEARSLNERDYR K E S A R S 1 1 0 1 1 0 2 0 1 0 1 0 0 0 0 1 0 0 1 0 0 10 0 1278.5299 Q9HAZ1;E7ES88;B7ZL31 Q9HAZ1 51 60 CLK4 Dual specificity protein kinase CLK4 yes no 2;3 0.022451 58.63 By matching By matching By matching By matching By matching By MS/MS 2 2 1 2 1 2 12795000 1713000 1420600 1189800 1234500 3264900 3971700 2121 1515 2148 9524;9525;9526;9527;9528;9529;9530;9531;9532;9533 6320;6321 6321 2 ESDTKNEVNGTSEDIK EDTNTESKESDTKNEV NGTSEDIKSEGDTQSN K E S I K S 0 0 2 2 0 0 3 1 0 1 0 2 0 0 0 2 2 0 0 1 0 16 1 1764.8014 O95232;B4DJ96;H0YBV7;H0YAR4 O95232 409 424 LUC7L3 Luc7-like protein 3 yes no 3 0.0068919 47.217 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 12440000 1641600 2732700 1743800 0 1527200 4795100 2122 766 2149 9534;9535;9536;9537;9538 6322;6323;6324 6322 3 ESDTKNEVNGTSEDIKSEGDTQSN EDTNTESKESDTKNEV SEGDTQSN________ K E S S N - 0 0 3 3 0 1 4 2 0 1 0 2 0 0 0 4 3 0 0 1 0 24 2 2583.1056 O95232 O95232 409 432 LUC7L3 Luc7-like protein 3 yes yes 3 8.6612E-30 98.76 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 14874000 0 2888700 4279400 1929400 2078900 3697500 2123 766 2150 9539;9540;9541;9542;9543 6325;6326;6327;6328 6327 4 ESDWDGIIACHQGK KFAAEEARESDWDGII IIACHQGKLSCSTWNY R E S G K L 1 0 0 2 1 1 1 2 1 2 0 1 0 0 0 1 0 1 0 0 0 14 0 1614.7097 Q8NI36;D6R922 Q8NI36 454 467 WDR36 WD repeat-containing protein 36 yes no 2;3 5.4986E-86 139.19 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 18345000 0 4328700 6100000 2290000 0 5626300 2124 1331 2151 9544;9545;9546;9547 6329;6330 6329 2 ESECITKPVSFLPQNK DSGGTSAKESECITKP VSFLPQNKEEIERTIK K E S N K E 0 0 1 0 1 1 2 0 0 1 1 2 0 1 2 2 1 0 0 1 0 16 1 1875.94 O75691 O75691 1754 1769 UTP20 Small subunit processome component 20 homolog yes yes 3 0.03727 53.395 By matching By MS/MS By matching By matching By matching By matching 1 4638900 0 4638900 0 0 0 0 2125 750 2152 9548 6331 6331 0 ESEFDDEPKFMSK KDKAKGRKESEFDDEP DEPKFMSKVIGANKNQ K E S S K V 0 0 0 2 0 0 3 0 0 0 0 2 1 2 1 2 0 0 0 0 0 13 1 1587.6763 Q9Y2W1 Q9Y2W1 443 455 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2;3 1.0633E-46 128.36 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 2 1 2 2 35412000 0 2365700 13098000 9025600 1849000 9074100 2126 1639 2153 9549;9550;9551;9552;9553;9554;9555;9556 6332;6333;6334;6335;6336;6337 6332 6 ESELPRRVNSASSSNPPAEVDPDTILK SDSPSMKKESELPRRV VDPDTILKALFKSSGA K E S L K A 2 2 2 2 0 0 3 0 0 1 2 1 0 0 4 5 1 0 0 2 0 27 2 2907.4574 Q9BY77;Q9BY77-2 Q9BY77 374 400 POLDIP3 Polymerase delta-interacting protein 3 yes no 4 0.00098339 40.83 By matching By MS/MS By matching By matching By matching By matching 1 1 14634000 0 9758700 0 4875400 0 0 2127 1465 2154 9557;9558 6338 6338 1 ESEMTDLTRK LEFSEAGKESEMTDLT EMTDLTRKEGLSACQQ K E S R K E 0 1 0 1 0 0 2 0 0 0 1 1 1 0 0 1 2 0 0 0 0 10 1 1208.5707 Q69YH5;E9PEI0 Q69YH5 173 182 CDCA2 Cell division cycle-associated protein 2 yes no 3 0.015 57.785 By matching By MS/MS By matching By matching By matching By matching 1 1 1395100 0 664060 731000 0 0 0 2128 1219 2155 9559;9560 6339 6339 1 ESFQRFLENHEK RSKYKEAKESFQRFLE RFLENHEKMTSTTRYK K E S E K M 0 1 1 0 0 1 3 0 1 0 1 1 0 2 0 1 0 0 0 0 0 12 1 1562.7478 E9PHJ7;O75400-2;O75400-3;F8W9L2;O75400 E9PHJ7 334 345 PRPF40A Pre-mRNA-processing factor 40 homolog A yes no 3 0.0018464 80.871 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 23002000 261250 6727200 13559000 0 0 2454300 2129 438 2156 9561;9562;9563;9564 6340 6340 1 ESGELYYSIEK GVVKGHRKESGELYYS ELYYSIEKEGQRKWYK K E S E K E 0 0 0 0 0 0 3 1 0 1 1 1 0 0 0 2 0 0 2 0 0 11 0 1316.6136 Q12888;Q12888-2;A6NNK5;F8VY86;H7BZY0 Q12888 1564 1574 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.017447 57.52 By MS/MS By matching By matching By matching By matching By matching 1 1 5583700 2893900 2689800 0 0 0 0 2130 1063 2157 9565;9566 6341 6341 1 ESHRDVLPDKPAPGAVNVPAAGSHLGQGK RTKIPAEKESHRDVLP GSHLGQGKRAIPVPNK K E S G K R 4 1 1 2 0 1 1 4 2 0 2 2 0 0 4 2 0 0 0 3 0 29 2 2903.5002 Q9NYZ3 Q9NYZ3 254 282 GTSE1 G2 and S phase-expressed protein 1 yes yes 4;5 0.0014888 42.353 By matching By matching By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 24491000 0 0 8547100 4010500 4329900 7603900 2131 1564 2158 9567;9568;9569;9570;9571;9572;9573;9574 6342;6343;6344;6345 6345 4 ESHRLPVDIAYK TGGIIDPKESHRLPVD LPVDIAYKRGYFNEEL K E S Y K R 1 1 0 1 0 0 1 0 1 1 1 1 0 0 1 1 0 0 1 1 0 12 1 1426.7569 P15924;P15924-2 P15924 2382 2393 DSP Desmoplakin yes no 3 0.00018486 96.604 By matching By MS/MS By matching By matching By matching By matching 1 1 1 5206500 0 1921000 1400100 0 0 1885400 2132 840 2159 9575;9576;9577 6346 6346 1 ESHWEENRNENSGNSWNK TRNPEKLKESHWEENR NSGNSWNKNFGSGWVS K E S N K N 0 1 5 0 0 0 4 1 1 0 0 1 0 0 0 3 0 2 0 0 0 18 1 2215.9267 Q99590-2;F8VXG7;Q99590 Q99590-2 729 746 SCAF11 Protein SCAF11 yes no 4 0.020316 38.808 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 4953800 0 0 0 1071800 1506700 2375200 2133 547 2160 9578;9579;9580 6347;6348 6348 2 ESLAGNKPANAVLHK ESHQHLSKESLAGNKP PANAVLHKVLNQLEEL K E S H K V 3 0 2 0 0 0 1 1 1 0 2 2 0 0 1 1 0 0 0 1 0 15 1 1547.842 H7C0J3;H7C3H7;I3L229;Q12873;E9PG89;Q12873-2 Q12873 1849 1863 CHD3 Chromodomain-helicase-DNA-binding protein 3 no no 3 0.0025558 61.03 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 33270000 0 7418900 5874800 729400 1877100 17370000 2134 430;663 2161 9581;9582;9583;9584;9585 6349 6349 1 ESLAGNKPANAVLHKGK ESHQHLSKESLAGNKP NAVLHKGKGRGGPARG K E S G K G 3 0 2 0 0 0 1 2 1 0 2 3 0 0 1 1 0 0 0 1 0 17 2 1732.9584 H7C0J3 H7C0J3 177 193 CHD3 yes yes 4 0.0031834 50.305 By matching By matching By matching By matching By matching By MS/MS 1 1 2368000 0 0 0 507080 0 1861000 2135 663 2162 9586;9587 6350 6350 1 ESLGHWSQGLK GKDAPIKKESLGHWSQ GHWSQGLKISMQDPKM K E S L K I 0 0 0 0 0 1 1 2 1 0 2 1 0 0 0 2 0 1 0 0 0 11 0 1240.62 C9JZ40;Q7Z2E3-4;Q7Z2E3-5;Q7Z2E3-9;Q7Z2E3-10;Q7Z2E3-11;Q7Z2E3-7;Q7Z2E3;C9J8U3;Q6JV81;F8W6G5;Q7Z2E3-3 C9JZ40 122 132 APTX Aprataxin yes no 2;3 0.012444 59.198 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 2 1 2 9707100 0 1848500 1930300 1748500 1435500 2744300 2136 274 2163 9588;9589;9590;9591;9592;9593;9594;9595 6351;6352;6353 6351 3 ESLKNVDENIRK QEQLEKAKESLKNVDE NVDENIRKLTGRDPND K E S R K L 0 1 2 1 0 0 2 0 0 1 1 2 0 0 0 1 0 0 0 1 0 12 2 1443.7682 Q9H307;G3V5F0;G3V579 Q9H307 17 28 PNN Pinin yes no 3 0.036767 84.821 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 12825000 0 1680100 712720 958090 5919500 3554300 2137 1486 2164 9596;9597;9598;9599;9600 6354 6354 0 ESMAGNKPANAVLHK ESHQHLSKESMAGNKP PANAVLHKVLKQLEEL K E S H K V 3 0 2 0 0 0 1 1 1 0 1 2 1 0 1 1 0 0 0 1 0 15 1 1565.7984 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1812 1826 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.00072722 78.287 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 60373000 1017500 8100300 18234000 1307600 3272000 28442000 2138 486 2165 9601;9602;9603;9604;9605;9606 6355;6356;6357;6358;6359 6356 5 ESPARSTPHRTPIITPNTK ERCQEHSKESPARSTP PIITPNTKAIQERLFK K E S T K A 1 2 1 0 0 0 1 0 1 2 0 1 0 0 4 2 4 0 0 0 0 19 2 2102.1233 Q9NQW6;Q9NQW6-2;H7C3S1 Q9NQW6 387 405 ANLN Actin-binding protein anillin yes no 4 0.0012358 55.437 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 44992000 4636600 6853100 11853000 9529200 7128700 4991600 2139 1533 2166 9607;9608;9609;9610;9611;9612 6360;6361 6361 2 ESPKQILDPAAR GKSIRTFKESPKQILD QILDPAARVTGMKKWP K E S A R V 2 1 0 1 0 1 1 0 0 1 1 1 0 0 2 1 0 0 0 0 0 12 1 1323.7147 P46013;F5H4V4;P46013-2 P46013 1070 1081 MKI67 Antigen KI-67 no no 2;3 0.0018592 82.505 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 3 14816000 2227300 3946000 2726000 0 0 5917100 2140 919;920 2167 9613;9614;9615;9616;9617;9618 6362;6363;6364;6365 6362 4 ESPKQILDPAARVTGMK GKSIRTFKESPKQILD AARVTGMKKWPRTPKE K E S M K K 2 1 0 1 0 1 1 1 0 1 1 2 1 0 2 1 1 0 0 1 0 17 2 1839.9877 P46013;F5H4V4;P46013-2 P46013 1070 1086 MKI67 Antigen KI-67 no no 3;4 1.0812E-12 95.755 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 2 1 1 2 113870000 32699000 7927300 30725000 2907400 0 39611000 2141 919;920 2168 9619;9620;9621;9622;9623;9624;9625;9626 6366;6367;6368;6369;6370;6371;6372;6373 6372 8 ESPKQILDPAASVTGSR SKSIKAFKESPKQILD AASVTGSRRQLRTRKE K E S S R R 2 1 0 1 0 1 1 1 0 1 1 1 0 0 2 3 1 0 0 1 0 17 1 1754.9163 P46013;F5H4V4;P46013-2 P46013 2527 2543 MKI67 Antigen KI-67 no no 3 5.2598E-05 84.94 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 6324200 0 2445500 0 702280 0 3176400 2142 919;920 2169 9627;9628;9629;9630 6374;6375;6376 6376 3 ESPKQILDPAASVTGSRR SKSIKAFKESPKQILD ASVTGSRRQLRTRKEK K E S R R Q 2 2 0 1 0 1 1 1 0 1 1 1 0 0 2 3 1 0 0 1 0 18 2 1911.0174 P46013;F5H4V4;P46013-2 P46013 2527 2544 MKI67 Antigen KI-67 no no 4 0.0069895 44.045 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 8210600 0 462160 1550400 717910 2236900 3243200 2143 919;920 2170 9631;9632;9633;9634;9635 6377 6377 1 ESQGSSGPEFSCNSFLQEK RTECSVARESQGSSGP CNSFLQEKAAAATGGT R E S E K A 0 0 1 0 1 2 3 2 0 0 1 1 0 2 1 5 0 0 0 0 0 19 0 2116.9008 P28356 P28356 198 216 HOXD9 Homeobox protein Hox-D9 yes yes 2 6.4321E-06 84.249 By matching By matching By MS/MS By matching By matching By matching 1 10342000 0 0 10342000 0 0 0 2144 884 2171 9636 6378 6378 1 ESQLLPDGERLAPNGR LGFPLELRESQLLPDG ERLAPNGREREAPAMG R E S G R E 1 2 1 1 0 1 2 2 0 0 3 0 0 0 2 1 0 0 0 0 0 16 1 1750.8962 Q6PJG2;F6RU81;H7C1L3 Q6PJG2 406 421 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 3 0.019967 40.941 By matching By matching By matching By matching By matching By MS/MS 1 1 2460500 659810 0 0 0 0 1800700 2145 1231 2172 9637;9638 6379 6379 1 ESQVNFQEGQLNSGK ISHELQVKESQVNFQE EGQLNSGKKQIEKLEQ K E S G K K 0 0 2 0 0 3 2 2 0 0 1 1 0 1 0 2 0 0 0 1 0 15 0 1663.7802 P49454 P49454 94 108 CENPF Centromere protein F yes yes 2 3.5959E-09 100.43 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 11072000 0 1980800 2532600 781270 1702800 4074100 2146 936 2173 9639;9640;9641;9642;9643 6380;6381;6382;6383;6384 6381 5 ESRPPDFISISASK EKSSDTTKESRPPDFI FISISASKNISGETPE K E S S K N 1 1 0 1 0 0 1 0 0 2 0 1 0 1 2 4 0 0 0 0 0 14 1 1532.7835 C9JA69;Q8WY36-2;Q8WY36 C9JA69 549 562 BBX HMG box transcription factor BBX yes no 3 0.00027681 71.031 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 10723000 0 2290700 0 0 0 8432800 2147 238 2174 9644;9645 6385;6386;6387 6387 2 ESRQEEMNSQQEEEEMETDAR LEKILQLKESRQEEMN EEMETDARSSLGQSAS K E S A R S 1 2 1 1 0 3 8 0 0 0 0 0 2 0 0 2 1 0 0 0 0 21 1 2584.029 Q13435;E9PPJ0;E9PJ04;H0YCG1 Q13435 281 301 SF3B2 Splicing factor 3B subunit 2 yes no 3 4.4905E-15 92.932 By matching By matching By matching By matching By matching By MS/MS 1 859010 0 0 0 0 0 859010 2148 1083 2175 9646 6388 6388 1 ESSEPTGSPAPVIQHSSATAPSNGLSVR QGYLESPKESSEPTGS PSNGLSVRSAAEAVAT K E S V R S 3 1 1 0 0 1 2 2 1 1 1 0 0 0 4 7 2 0 0 2 0 28 0 2762.3471 P17544-4;P17544-2;P17544-3;P17544-6;P17544 P17544-4 240 267 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes no 3 0.022521 28.039 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 2623200 966850 0 0 0 0 1656300 2149 850 2176 9647;9648 6389;6390 6390 2 ESSEVYFLATQYHGRK IKPEASRKESSEVYFL ATQYHGRKGTVKQ___ K E S R K G 1 1 0 0 0 1 2 1 1 0 1 1 0 1 0 2 1 0 2 1 0 16 1 1913.9272 E9PGN6;Q9UI43 E9PGN6 132 147 FTSJ2 Putative ribosomal RNA methyltransferase 2 yes no 3 0.036404 32.702 By matching By matching By matching By matching By matching By MS/MS 1 1925600 0 0 0 0 0 1925600 2150 432 2177 9649 6391 6391 1 ESSTVFELK TTIFTDAKESSTVFEL SSTVFELKRIVEGILK K E S L K R 0 0 0 0 0 0 2 0 0 0 1 1 0 1 0 2 1 0 0 1 0 9 0 1038.5233 B8ZZU8;Q15370;B7WPD3;I3L0M9 B8ZZU8 15 23 TCEB2 Transcription elongation factor B polypeptide 2 yes no 2 0.018678 70.552 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 19591000 0 3534400 4160100 957520 439150 10500000 2151 179 2178 9650;9651;9652;9653;9654 6392 6392 1 ESTDDESNPLGR SIQAEDERESTDDESN DESNPLGRAGIWTKTH R E S G R A 0 1 1 2 0 0 2 1 0 0 1 0 0 0 1 2 1 0 0 0 0 12 0 1318.5637 Q14CA3;Q14669;Q14CF1 Q14CA3 1423 1434 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 2 0.028678 48.115 By matching By matching By matching By matching By matching By MS/MS 1 881880 0 0 0 0 0 881880 2152 1122 2179 9655 6393 6393 1 ESTGAQVQVAGDMLPNSTER GCKIKEIRESTGAQVQ MLPNSTERAITIAGVP R E S E R A 2 1 1 1 0 2 2 2 0 0 1 0 1 0 1 2 2 0 0 2 0 20 0 2088.9746 F8VZX2;Q15366-4;Q15366-5;Q15366-3;Q15366;Q15366-2;H3BRU6;G3V0E8;B4DXP5;B4DRD7;F8W0G4;B4DLC0;F8VRG9;F8VXH9;F8VWQ4;P57721-2;P57721-3;P57721-5;E9PFP8;P57721-4;P57721;H9KV40;Q15365 Q15365 125 144 PCBP2;PCBP3;PCBP1 Poly(rC)-binding protein 2;Poly(rC)-binding protein 3;Poly(rC)-binding protein 1 no no 2;3 1.3636E-199 158.15 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 3 1 1 1 2 175240000 11836000 103910000 8113000 5079000 1765500 44539000 2153 1135;548 2180;2181 9656;9657;9658;9659;9660;9661;9662;9663;9664;9665 6394;6395;6396;6397;6398;6399;6400;6401 6396 62 8 ESTNYPGDYTLCVSCDGK ETGLFLVRESTNYPGD LCVSCDGKVEHYRIMY R E S G K V 0 0 1 2 2 0 1 2 0 0 1 1 0 0 1 2 2 0 2 1 0 18 0 2064.8405 P41240;H3BU69 P41240 108 125 CSK Tyrosine-protein kinase CSK yes no 2 0.0017941 64.298 By matching By matching By matching By matching By matching By MS/MS 1 2425700 0 0 0 0 0 2425700 2154 912 2182 9666 6402 6402 1 ESTSSDCKLPTSEESR SVPKEDGKESTSSDCK LPTSEESRLGSKEPRP K E S S R L 0 1 0 1 1 0 3 0 0 0 1 1 0 0 1 5 2 0 0 0 0 16 1 1811.7843 O15014 O15014 1185 1200 ZNF609 Zinc finger protein 609 yes yes 3 0.00147 75.998 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 8742200 0 1831300 1917700 904790 1866400 2222000 2155 701 2183 9667;9668;9669;9670;9671 6403;6404;6405;6406 6404 4 ESWSGETRQDGESK TFRRDRERESWSGETR TRQDGESKTIMLKRIY R E S S K T 0 1 0 1 0 1 3 2 0 0 0 1 0 0 0 3 1 1 0 0 0 14 1 1594.6859 Q86SS3;E9PGM9;P78332;C9JSL1;F8WF63;F8WCA5 Q86SS3 121 134 RBM6 RNA-binding protein 6 yes no 3 0.024471 43.594 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 2190200 296700 431530 586710 0 318900 556390 2156 431 2184 9672;9673;9674;9675;9676 6407 6407 1 ESYSVYVYK KKRKRSRKESYSVYVY SYSVYVYKVLKQVHPD K E S Y K V 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 2 0 0 3 2 0 9 0 1136.539 Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q5QNW6-2;B4DR52;Q99880;P57053 Q99879 36 44 HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B;Histone H2B type 1-L;Histone H2B type F-S yes no 2 0.011026 83.783 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 51280000 427360 10909000 3156500 4370800 19590000 12826000 2157 119 2185 9677;9678;9679;9680;9681;9682 6408;6409;6410 6409 3 ETAAGGLTLK SLEGPLPKETAAGGLT AAGGLTLKEERSPQTL K E T L K E 2 0 0 0 0 0 1 2 0 0 2 1 0 0 0 0 2 0 0 0 0 10 0 959.52876 Q92797 Q92797 1230 1239 SYMPK Symplekin yes yes 2 0.030524 57.149 By matching By matching By matching By matching By matching By MS/MS 1 1133500 0 0 0 0 0 1133500 2158 1360 2186 9683 6411 6411 1 ETEENKELTDTCKER EDTKSEEKETEENKEL LTDTCKERESDTGKKK K E T E R E 0 1 1 1 1 0 5 0 0 0 1 2 0 0 0 0 3 0 0 0 0 15 2 1880.8422 Q92922 Q92922 834 848 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 3;4 0.0024434 76.311 By matching By MS/MS By matching By MS/MS By matching By MS/MS 2 2 2 1 2 2 29138000 3774300 4877300 4549100 1830300 6991500 7115800 2159 1365 2187 9684;9685;9686;9687;9688;9689;9690;9691;9692;9693;9694 6412;6413;6414;6415 6414 4 ETEISLKDSTLDN KKPSSEERETEISLKD LKDSTLDN________ R E T D N - 0 0 1 2 0 0 2 0 0 1 2 1 0 0 0 2 2 0 0 0 0 13 1 1463.6991 O75475 O75475 518 530 PSIP1 PC4 and SFRS1-interacting protein yes yes 2 1.4079E-08 101.39 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 58504000 9725500 10409000 8084700 5291700 8855900 16137000 2160 741 2188 9695;9696;9697;9698;9699;9700 6416;6417;6418;6419;6420 6419 5 ETEPCESQLTLTAGEIR E T I R 1 1 0 0 1 1 4 1 0 1 2 0 0 0 1 1 3 0 0 0 0 17 0 1932.9099 REV__Q14872 yes yes 3 0.0032987 49.265 By MS/MS By matching By matching By matching By matching By matching 1 7925200 7925200 0 0 0 0 0 + 2161 1677 2189 9701 6421 6421 1 ETGLSYTEDDK LKAPEKTRETGLSYTE LSYTEDDKKASPEHRI R E T D K K 0 0 0 2 0 0 2 1 0 0 1 1 0 0 0 1 2 0 1 0 0 11 0 1256.5408 Q13415 Q13415 298 308 ORC1 Origin recognition complex subunit 1 yes yes 2 0.00029965 98.182 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 7119700 681980 1125500 1672000 446850 898960 2294400 2162 1080 2190 9702;9703;9704;9705;9706;9707 6422;6423;6424;6425;6426 6425 5 ETGLSYTEDDKK LKAPEKTRETGLSYTE SYTEDDKKASPEHRII R E T K K A 0 0 0 2 0 0 2 1 0 0 1 2 0 0 0 1 2 0 1 0 0 12 1 1384.6358 Q13415 Q13415 298 309 ORC1 Origin recognition complex subunit 1 yes yes 2 0.0032456 93.766 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1876800 0 324700 419550 0 243520 888990 2163 1080 2191 9708;9709;9710;9711 6427 6427 1 ETGYVVERPSTTKDK EEKNYKLKETGYVVER RPSTTKDKHKEEDKNS K E T D K H 0 1 0 1 0 0 2 1 0 0 0 2 0 0 1 1 3 0 1 2 0 15 2 1708.8632 Q9NYF8-2;Q9NYF8;E9PK09;E9PQN2;E9PKI6;Q9NYF8-3;E9PK91 Q9NYF8-2 461 475 BCLAF1 Bcl-2-associated transcription factor 1 no no 3 0.026719 48.277 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 5590800 0 0 246460 1086400 1851900 2406000 2164 1563;452 2192 9712;9713;9714;9715 6428 6428 1 ETIELSPTGRPK NMFGSSEKETIELSPT LSPTGRPKRRTRKSIN K E T P K R 0 1 0 0 0 0 2 1 0 1 1 1 0 0 2 1 2 0 0 0 0 12 1 1326.7143 Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-4;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9 Q9NRZ9-6 368 379 HELLS Lymphoid-specific helicase yes no 2 0.0024547 92.781 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 7024600 0 1960600 1216900 425150 924700 2497300 2165 1540 2193 9716;9717;9718;9719;9720 6429;6430 6430 2 ETIVEVGSDLPDSGK EFLKHAGKETIVEVGS SDLPDSGKGFASRENR K E T G K G 0 0 0 2 0 0 2 2 0 1 1 1 0 0 1 2 1 0 0 2 0 15 0 1544.757 Q9BYW2;F2Z317;H7C3H4;H7BZ93;Q9BYW2-3;Q9BYW2-2;F5H340;C9JG86;H7BXT4 Q9BYW2 927 941 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 2 0.025064 49.595 By matching By matching By matching By matching By matching By MS/MS 1 1906500 0 0 0 0 0 1906500 2166 479 2194 9721 6431 6431 0 ETLGSEAVSSNVIDYGHASK LPSQSRNKETLGSEAV IDYGHASKYGYTEDPL K E T S K Y 2 0 1 1 0 0 2 2 1 1 1 1 0 0 0 4 1 0 1 2 0 20 0 2062.9807 Q14966-3;Q14966;Q14966-4;Q14966-2;C9JBI6;F5H330 Q14966-3 197 216 ZNF638 Zinc finger protein 638 yes no 3 8.2379E-66 121.51 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 27362000 0 3358400 0 3831700 0 20172000 2167 1118 2195 9722;9723;9724 6432;6433;6434 6433 3 ETMQILPFQPKLFDLK E T L K 0 0 0 1 0 2 1 0 0 1 3 2 1 2 2 0 1 0 0 0 0 16 1 1947.054 REV__P59045-2 yes no 4 0.0042188 52.009 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 2 1 1 61143000 0 6691000 8379100 22033000 18425000 5613800 + 2168 1676 2196 9725;9726;9727;9728;9729;9730 6435;6436 6436 2 ETPHSPGVEDAPIAK PAQLANARETPHSPGV VEDAPIAKVGVLAASM R E T A K V 2 0 0 1 0 0 2 1 1 1 0 1 0 0 3 1 1 0 0 1 0 15 0 1546.7627 F8VQE1;Q9UHB6-2;B4DN52;Q9UHB6;Q9UHB6-4;F8VS07;Q9UHB6-3 F8VQE1 325 339 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.0069264 48.608 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 7970100 740850 1374100 1197600 798760 1441000 2417800 2169 107 2197 9731;9732;9733;9734;9735;9736 6437;6438 6438 2 ETPYSEEDFQHLQK LLPEDKCKETPYSEED EDFQHLQKEIEQLQEK K E T Q K E 0 0 0 1 0 2 3 0 1 0 1 1 0 1 1 1 1 0 1 0 0 14 0 1749.7846 Q9H081;I3L4K6 Q9H081 106 119 MIS12 Protein MIS12 homolog yes no 3 0.0043056 56.414 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1797800 0 548220 394910 0 854630 0 2170 1476 2198 9737;9738;9739 6439 6439 1 ETRMDLQIGTEK EEKEFNTKETRMDLQI DLQIGTEKAEKNEGRM K E T E K A 0 1 0 1 0 1 2 1 0 1 1 1 1 0 0 0 2 0 0 0 0 12 1 1419.7028 Q14966-3;Q14966;Q14966-5;F5H6M8;E7EUZ3 Q14966-3 1319 1330 ZNF638 Zinc finger protein 638 yes no 3 0.0014092 91.313 By matching By MS/MS By matching By matching By matching By matching 1 1 1 4487500 1850900 1140200 1496400 0 0 0 2171 1118 2199 9740;9741;9742 6440 6440 1 ETSMTEPSEPGSK SEVSEQPKETSMTEPS EPSEPGSKAEAKKALG K E T S K A 0 0 0 0 0 0 3 1 0 0 0 1 1 0 2 3 2 0 0 0 0 13 0 1378.5922 Q9UKJ3;Q9UKJ3-2 Q9UKJ3 467 479 GPATCH8 G patch domain-containing protein 8 yes no 2 0.00037117 84.169 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 353690 0 0 0 0 353690 0 2172 1601 2200 9743;9744 6441;6442 6441 2 ETTRYNHPKPNLLYQK VQIRSLSKETTRYNHP KPNLLYQKFVKMATLT K E T Q K F 0 1 2 0 0 1 1 0 1 0 2 2 0 0 2 0 2 0 2 0 0 16 2 2001.0432 Q5T3I0;Q5T3I0-3;E9PAV9;E9PPY4;F2Z3C6;Q5T3I0-2 Q5T3I0 93 108 GPATCH4 G patch domain-containing protein 4 yes no 4 0.0009801 74.649 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 16310000 0 3321900 3934000 2972000 6081600 0 2173 1191 2201 9745;9746;9747;9748 6443;6444;6445;6446 6446 4 ETTSSSISRHYGLSDSRK FTGASSAKETTSSSIS YGLSDSRKRTRTGRSW K E T R K R 0 2 0 1 0 0 1 1 1 1 1 1 0 0 0 6 2 0 1 0 0 18 2 2009.9766 B1AKT6;Q9Y483;Q9Y483-2;Q9Y483-3 B1AKT6 407 424 MTF2 Metal-response element-binding transcription factor 2 yes no 4 0.011745 40.693 By MS/MS By matching By matching By matching By MS/MS By matching 2 1 1 1 1 1 19601000 2845400 1503500 5677600 3463200 3974100 2137600 2174 62 2202 9749;9750;9751;9752;9753;9754;9755 6447;6448 6447 2 ETTTGYYKDIVENICGREK AASPSLIKETTTGYYK ENICGREKSGIQPLCP K E T E K S 0 1 1 1 1 0 3 2 0 2 0 2 0 0 0 0 3 0 2 1 0 19 2 2275.0791 P42166 P42166 316 334 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 3 0.022464 43.752 By matching By matching By matching By MS/MS By matching By matching 1 8541600 0 0 0 8541600 0 0 2175 913 2203 9756 6449 6449 1 ETVIKQTMER QGRRHCSRETVIKQTM VIKQTMERERQQFEGY R E T E R E 0 1 0 0 0 1 2 0 0 1 0 1 1 0 0 0 2 0 0 1 0 10 1 1233.6387 Q96EY4;H0Y9X1;D6RA57 Q96EY4 110 119 TMA16 Translation machinery-associated protein 16 yes no 2;3 0.018925 72.434 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 2 2 1 5380000 460190 681200 1963100 0 902470 1373000 2176 615 2204 9757;9758;9759;9760;9761;9762;9763 6450;6451;6452 6452 3 ETYGDMADCCEK LCKVASLRETYGDMAD DMADCCEKQEPERNEC R E T E K Q 1 0 0 2 2 0 2 1 0 0 0 1 1 0 0 0 1 0 1 0 0 12 0 1477.516 CON__P02769 CON__P02769 106 117 yes yes 2 0.00046629 94.402 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 19808000 2370900 2472200 1473100 1188100 3814100 8489900 + 2177 294 2205 9764;9765;9766;9767;9768;9769 6453;6454;6455;6456 6456 4 EVAAQVKAPLVLKD IVEALNGKEVAAQVKA KAPLVLKD________ K E V K D - 3 0 0 1 0 1 1 0 0 0 2 2 0 0 1 0 0 0 0 3 0 14 2 1479.8661 Q99497 Q99497 176 189 PARK7 Protein DJ-1 yes yes 2;3 0.0036664 84.753 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 2 54792000 0 7321900 0 554860 0 46915000 2178 1425 2206 9770;9771;9772;9773;9774 6457;6458;6459;6460 6457 4 EVADSYAQNAK EEEEIEAREVADSYAQ DSYAQNAKVIEKQLER R E V A K V 3 0 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 0 1 1 0 11 0 1194.5517 A8MPX7;F5GWL7;Q9H5V9 A8MPX7 124 134 CXorf56 UPF0428 protein CXorf56 yes no 2 0.0018545 90.05 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 4658700 0 1185200 1734900 0 488310 1250300 2179 37 2207 9775;9776;9777;9778 6461;6462;6463 6463 3 EVAEKQEATRQDHAQQLATAAEER KQKEQQLKEVAEKQEA LATAAEEREASLRERD K E V E R E 6 2 0 1 0 4 5 0 1 0 1 1 0 0 0 0 2 0 0 1 0 24 2 2708.3114 Q14980-2;Q14980;F5H4J1;F5H6Y5 Q14980-2 569 592 NUMA1 Nuclear mitotic apparatus protein 1 yes no 4 3.5272E-07 60.735 By matching By matching By matching By matching By matching By MS/MS 1 1 2639900 0 1387900 0 0 0 1251900 2180 1121 2208 9779;9780 6464;6465 6465 2 EVASNSELVQSSR SKTEELNKEVASNSEL SELVQSSRSEVTELRR K E V S R S 1 1 1 0 0 1 2 0 0 0 1 0 0 0 0 4 0 0 0 2 0 13 0 1404.6845 P08779;CON__P08779 P08779 318 330 KRT16 Keratin, type I cytoskeletal 16 yes no 2 0.018793 56.139 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 710920 0 330980 0 0 0 379940 + 2181 297 2209 9781;9782 6466;6467 6466 1 EVATAIRGAIILAK GLGVKCSKEVATAIRG RGAIILAKLSIVPVRR K E V A K L 4 1 0 0 0 0 1 1 0 3 1 1 0 0 0 0 1 0 0 1 0 14 1 1424.8715 P15880;H0YEN5;E9PMM9;I3L404;E9PM36;E9PPT0 P15880 146 159 RPS2 40S ribosomal protein S2 yes no 2;3 3.4015E-146 157.5 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 2 1 1 143120000 0 34723000 11938000 54589000 15622000 26246000 2182 839 2210 9783;9784;9785;9786;9787;9788 6468;6469;6470;6471;6472 6469 5 EVATNSELVQSGK TKTEELNREVATNSEL SELVQSGKSEISELRR R E V G K S 1 0 1 0 0 1 2 1 0 0 1 1 0 0 0 2 1 0 0 2 0 13 0 1360.6834 P02533;CON__P02533;Q04695;CON__Q04695;H9KV34;A8MW45;CON__Q9QWL7;F5GWP8 P02533 316 328 KRT14;KRT17;JUP Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 2 0.0022316 70.373 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1952800 0 0 790790 475680 0 686320 + 2183 286;304;485 2211 9789;9790;9791 6473;6474 6474 2 EVDATSPAPSTSSTVK ALSRKRKKEVDATSPA PSTSSTVKTEGAEATP K E V V K T 2 0 0 1 0 0 1 0 0 0 0 1 0 0 2 4 3 0 0 2 0 16 0 1575.7628 Q16666-3;Q16666-2;Q16666;H3BLV7;E7EPR3;H3BM18 Q16666-3 101 116 IFI16 Gamma-interferon-inducible protein 16 yes no 2 0.0014419 75.998 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 6801700 1980800 0 788630 1315400 0 2716900 2184 1155 2212 9792;9793;9794;9795 6475;6476;6477;6478;6479 6476 5 EVDATSPAPSTSSTVKTEGAEATPGAQK ALSRKRKKEVDATSPA EATPGAQKRKKSTKEK K E V Q K R 5 0 0 1 0 1 3 2 0 0 0 2 0 0 3 4 5 0 0 2 0 28 1 2716.3039 Q16666-3;Q16666-2;Q16666;H3BM18 Q16666-3 101 128 IFI16 Gamma-interferon-inducible protein 16 yes no 3 0.00022549 43.696 By matching By matching By matching By matching By MS/MS By matching 1 806470 0 0 0 0 806470 0 2185 1155 2213 9796 6480 6480 1 EVDEQMLNVQNK FRGRMSMKEVDEQMLN QMLNVQNKNSSYFVEW K E V N K N 0 0 2 1 0 2 2 0 0 0 1 1 1 0 0 0 0 0 0 2 0 12 0 1445.682 P68371;E7EWR1;Q5ST81;F5H8C9;Q9BVA1;Q13885;F5H894;F8VUJ7;Q5JP53;F8VYX6;F8VW92;P07437;E9PBJ4 P68371 325 336 TUBB4B;TUBB;TUBB2B;TUBB2A Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta chain no no 2 4.3174E-141 165.63 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 22385000 819380 0 0 0 3198500 18367000 2186 1007;542 2214;2215 9797;9798;9799;9800;9801 6481;6482;6483;6484;6485;6486 6483 60 6 EVDGLLR PTWRDFAKEVDGLLRI KEVDGLLRIGAVNCGD K E V L R I 0 1 0 1 0 0 1 1 0 0 2 0 0 0 0 0 0 0 0 1 0 7 0 800.43922 Q8IXB1;Q8IXB1-2;F8W884;Q3B7W8;E7EP04 Q8IXB1 174 180 DNAJC10 DnaJ homolog subfamily C member 10 yes no 2 0.019919 106.42 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 8798800 868730 3033100 0 600950 0 4296000 2187 1287 2216 9802;9803;9804;9805;9806 6487;6488;6489 6488 3 EVDYDSDMPRK DITVLREREVDYDSDM YDSDMPRKITEVLVRK R E V R K I 0 1 0 3 0 0 1 0 0 0 0 1 1 0 1 1 0 0 1 1 0 11 1 1353.5871 H0Y7A5;Q9BX10-2;Q9BX10-4;Q9BX10 H0Y7A5 111 121 GTPBP2 GTP-binding protein 2 yes no 3 0.0056992 63.694 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 5443700 0 717830 897660 605960 1875500 1346800 2188 613 2217 9807;9808;9809;9810;9811 6490;6491;6492;6493;6494 6492 5 EVDYSDSLTEK GRGSRHRKEVDYSDSL YSDSLTEKQWLKAIEE K E V E K Q 0 0 0 2 0 0 2 0 0 0 1 1 0 0 0 2 1 0 1 1 0 11 0 1284.5721 P51532-5;P51532-2;P51532-3;P51532-4;P51532;Q9HBD4;F5H0X5;H0YGM3 P51532-5 1343 1353 SMARCA4 Transcription activator BRG1 yes no 2 0.0036199 81.525 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4898800 0 0 415080 0 1168000 3315700 2189 952 2218 9812;9813;9814 6495 6495 1 EVEAQLPEK FLLRRLKKEVEAQLPE VEAQLPEKVEYVIKCD K E V E K V 1 0 0 0 0 1 3 0 0 0 1 1 0 0 1 0 0 0 0 1 0 9 0 1041.5342 P51532-5;P51532-2;P51532-3;P51532-4;P51532;Q9HBD4;F5H0X5 P51532-5 983 991 SMARCA4 Transcription activator BRG1 yes no 2 0.021779 68.847 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 5717700 0 591700 786410 361280 1506000 2472300 2190 952 2219 9815;9816;9817;9818;9819 6496 6496 1 EVEIQSHLRHPNILR GVEHQLRREVEIQSHL LRHPNILRLYGYFHDA R E V L R L 0 2 1 0 0 1 2 0 2 2 2 0 0 0 1 1 0 0 0 1 0 15 1 1840.0068 O14965;A3KFJ0;Q5QPD4 O14965 181 195 AURKA Aurora kinase A yes no 4 0.0027835 63.662 By matching By matching By matching By matching By matching By MS/MS 1 1 1 11126000 0 0 1480300 0 1313300 8332200 2191 698 2220 9820;9821;9822 6497 6497 1 EVELVSE KKKKKKAKEVELVSE_ KEVELVSE________ K E V S E - 0 0 0 0 0 0 3 0 0 0 1 0 0 0 0 1 0 0 0 2 0 7 0 803.39126 O60832 O60832 508 514 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 1 7.0611E-05 117.56 By matching By matching By matching By matching By MS/MS By matching 1 1 1 3241600 0 0 0 394310 1776000 1071300 2192 733 2221 9823;9824;9825 6498 6498 1 EVEQSRQEVVR KEMAAQIREVEQSRQE QSRQEVVRSVLEPQAV R E V V R S 0 2 0 0 0 2 3 0 0 0 0 0 0 0 0 1 0 0 0 3 0 11 1 1357.695 Q86UT8;E9PJ16 Q86UT8 157 167 CCDC84 Coiled-coil domain-containing protein 84 yes no 3 1.4541E-05 105.2 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 4723600 538580 1370100 0 294250 622520 1898200 2193 1263 2222 9826;9827;9828;9829;9830 6499;6500 6499 2 EVESQLPEK FLLRRLKKEVESQLPE VESQLPEKVEYVIKCD K E V E K V 0 0 0 0 0 1 3 0 0 0 1 1 0 0 1 1 0 0 0 1 0 9 0 1057.5292 P51531-2;P51531 P51531-2 953 961 SMARCA2 Probable global transcription activator SNF2L2 yes no 2 0.016649 72.848 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 2554700 0 0 456380 0 552730 1545600 2194 951 2223 9831;9832;9833 6501;6502;6503 6501 3 EVEVIGGADK TKRLGTEKEVEVIGGA EVIGGADKYHSVCRLC K E V D K Y 1 0 0 1 0 0 2 2 0 1 0 1 0 0 0 0 0 0 0 2 0 10 0 1015.5186 P04183 P04183 171 180 TK1 Thymidine kinase, cytosolic yes yes 2 0.002822 96.342 By matching By matching By MS/MS By matching By matching By matching 1 1 4034200 0 0 2498300 0 1535800 0 2195 787 2224 9834;9835 6504 6504 1 EVEVIGGADKYHSVCR TKRLGTEKEVEVIGGA DKYHSVCRLCYFKKAS K E V C R L 1 1 0 1 1 0 2 2 1 1 0 1 0 0 0 1 0 0 1 3 0 16 1 1817.873 P04183 P04183 171 186 TK1 Thymidine kinase, cytosolic yes yes 3;4 9.1183E-38 117.08 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 1 2 94701000 6056200 18187000 23103000 6959300 8257800 32139000 2196 787 2225 9836;9837;9838;9839;9840;9841;9842;9843;9844;9845 6505;6506;6507;6508;6509;6510;6511;6512;6513 6506 9 EVEVIGGADKYHSVCRLCYFK TKRLGTEKEVEVIGGA VCRLCYFKKASGQPAG K E V F K K 1 1 0 1 2 0 2 2 1 1 1 2 0 1 0 1 0 0 2 3 0 21 2 2529.2144 P04183 P04183 171 191 TK1 Thymidine kinase, cytosolic yes yes 3;4 2.5975E-09 84.653 By matching By matching By matching By MS/MS By matching By matching 2 34983000 0 0 0 34983000 0 0 2197 787 2226 9846;9847 6514;6515 6514 2 EVFEDAAEIR KVTQDELKEVFEDAAE FEDAAEIRLVSKDGKS K E V I R L 2 1 0 1 0 0 3 0 0 1 0 0 0 1 0 0 0 0 0 1 0 10 0 1177.5615 E7EX81;P19338;H7BY16 E7EX81 303 312 NCL Nucleolin yes no 2 0.003334 89.171 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 2159300 1122800 1036600 0 0 0 0 2198 397 2227 9848;9849 6516;6517 6517 2 EVGSIIGK IRLLMHGKEVGSIIGK EVGSIIGKKGESVKRI K E V G K K 0 0 0 0 0 0 1 2 0 2 0 1 0 0 0 1 0 0 0 1 0 8 0 801.45962 F8VZX2;Q15366-4;Q15366-5;Q15366-3;Q15366;Q15366-2;H3BRU6;G3V0E8;B4DXP5;F8W0G4;B4DLC0;F8VRG9;F8W1G6;P57721-2;P57721-3;P57721-5;E9PFP8;P57721-4;P57721;F8VTZ0;H3BSP4;C9K0A2;F8WC71;C9IZV9;C9J7A9;C9JSA6;C9J5V4;C9JTY5;C9JZY3;C9J0A4;P57723-2;E7EST1;P57723;Q15365 Q15365 24 31 PCBP2;PCBP3;PCBP4;PCBP1 Poly(rC)-binding protein 2;Poly(rC)-binding protein 3;Poly(rC)-binding protein 4;Poly(rC)-binding protein 1 no no 1;2 0.020209 79.713 By MS/MS By matching By MS/MS By matching By MS/MS By matching 2 1 2 1 2 1 217070000 16095000 40322000 37342000 10815000 32501000 79993000 2199 1135;548 2228 9850;9851;9852;9853;9854;9855;9856;9857;9858 6518;6519;6520;6521 6520 4 EVIAKELSK SKELSMAKEVIAKELS VIAKELSKTYQETPEI K E V S K T 1 0 0 0 0 0 2 0 0 1 1 2 0 0 0 1 0 0 0 1 0 9 1 1015.5914 O96006 O96006 449 457 ZBED1 Zinc finger BED domain-containing protein 1 yes yes 2 0.015711 93.667 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 7237900 600580 1249400 3701200 0 0 1686700 2200 778 2229 9859;9860;9861;9862 6522;6523 6523 2 EVIDKYTAVVK HKKKAIVKEVIDKYTA DKYTAVVKMIDSGDKL K E V V K M 1 0 0 1 0 0 1 0 0 1 0 2 0 0 0 0 1 0 1 3 0 11 1 1263.7075 B4DX32;O60870;F5GXB3 B4DX32 307 317 KIN DNA/RNA-binding protein KIN17 yes no 3 0.011762 63.073 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2739200 0 550080 0 0 542440 1646700 2201 136 2230 9863;9864;9865 6524;6525;6526 6525 3 EVINHHPDVQTK TCISEHSKEVINHHPD HHPDVQTKDDKLKNSV K E V T K D 0 0 1 1 0 1 1 0 2 1 0 1 0 0 1 0 1 0 0 2 0 12 0 1415.7157 Q5VYS8-6;Q5VYS8;Q5VYS8-4 Q5VYS8-6 656 667 ZCCHC6 Terminal uridylyltransferase 7 yes no 3 0.0036108 65.179 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1292500 358030 558570 0 0 375910 0 2202 1210 2231 9866;9867;9868 6527 6527 1 EVINRPFTNESLQPHALGPVK LNFAARSKEVINRPFT PHALGPVKLSQKELLG K E V V K L 1 1 2 0 0 1 2 1 1 1 2 1 0 1 3 1 1 0 0 2 0 21 1 2345.2492 Q14807;B7Z265;H3BRB3 Q14807 367 387 KIF22 Kinesin-like protein KIF22 yes no 3;4 2.5687E-133 137.69 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 158280000 0 0 0 3275000 5639100 149370000 2203 1115 2232 9869;9870;9871;9872 6528;6529;6530;6531 6530 4 EVITAQDTVIKAK QEEVTKQKEVITAQDT QDTVIKAKYAEVAKHK K E V A K Y 2 0 0 1 0 1 1 0 0 2 0 2 0 0 0 0 2 0 0 2 0 13 1 1414.8031 O95347-2;O95347 O95347-2 880 892 SMC2 Structural maintenance of chromosomes protein 2 yes no 2 0.0057852 69.352 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1356000 0 0 232760 0 352580 770640 2204 770 2233 9873;9874;9875 6532 6532 1 EVKEELSAVER CPKTRPRKEVKEELSA EELSAVERLTQTSGQS K E V E R L 1 1 0 0 0 0 4 0 0 0 1 1 0 0 0 1 0 0 0 2 0 11 1 1287.667 P46013;F5H4V4;P46013-2 P46013 2611 2621 MKI67 Antigen KI-67 no no 3 0.026147 52.79 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 7027300 351210 1208100 1163200 765490 0 3539300 2205 919;920 2234 9876;9877;9878;9879;9880 6533 6533 1 EVLEDFAEDGEK RRLEKNVKEVLEDFAE DFAEDGEKKIKLLTGK K E V E K K 1 0 0 2 0 0 4 1 0 0 1 1 0 1 0 0 0 0 0 1 0 12 0 1379.6093 O60313;E5KLK1;E5KLJ6;E5KLJ9;O60313-2;E5KLJ5;H7C141;H7C3G2 O60313 912 923 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 2 3.0634E-05 100.38 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 21474000 0 2914900 8914000 2111500 2294300 5238800 2206 336 2235 9881;9882;9883;9884;9885 6534;6535;6536 6536 3 EVLEEISCYPENNDAK SDAVQRAKEVLEEISC YPENNDAKELKRILTQ K E V A K E 1 0 2 1 1 0 4 0 0 1 1 1 0 0 1 1 0 0 1 1 0 16 0 1908.8411 Q5JS72;O14936-5;Q5JS74;O14936-3;O14936-4;O14936-6;F8W998;O14936-2;H9KV37;O14936 Q5JS72 26 41 CASK Peripheral plasma membrane protein CASK yes no 2 0.0029454 55.011 By matching By MS/MS By matching By matching By matching By matching 1 2218600 0 2218600 0 0 0 0 2207 562 2236 9886 6537 6537 1 EVLEHPWITANSSKPSNCQNK PSQRPMLREVLEHPWI KPSNCQNKESASKQS_ R E V N K E 1 0 3 0 1 1 2 0 1 1 1 2 0 0 2 3 1 1 0 1 0 21 1 2438.1649 O14965 O14965 376 396 AURKA Aurora kinase A yes yes 3 0.0029764 47.732 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 8987200 550200 803210 0 0 299850 7334000 2208 698 2237 9887;9888;9889;9890 6538 6538 1 EVLLLMQALNTLSTPEEK NKEKTLGKEVLLLMQA TLSTPEEKLAALCKKY K E V E K L 1 0 1 0 0 1 3 0 0 0 5 1 1 0 1 1 2 0 0 1 0 18 0 2028.0813 Q9NUQ3;Q9BZA5;H7C3Y3 Q9NUQ3 138 155 TXLNG;TXLNG2P Gamma-taxilin;Putative gamma-taxilin 2 yes no 2 4.1098E-29 107.41 By matching By matching By matching By MS/MS By matching By matching 1 0 0 0 0 0 0 0 2209 1546 2238 9891 6539 6539 1 EVLVVNSQGEISR NKLFKEGKEVLVVNSQ NSQGEISRLSTKKEVI K E V S R L 0 1 1 0 0 1 2 1 0 1 1 0 0 0 0 2 0 0 0 3 0 13 0 1428.7573 Q12830-4;Q12830-2;Q12830;F5GXF5;F5H176 Q12830-4 811 823 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 0.0030946 64.104 By matching By MS/MS By matching By matching By matching By matching 1 1 1 3483600 0 918440 0 0 539280 2025800 2210 1061 2239 9892;9893;9894 6540;6541 6541 2 EVLVVNSQGEISRLSTK NKLFKEGKEVLVVNSQ EISRLSTKKEVIMKGN K E V T K K 0 1 1 0 0 1 2 1 0 1 2 1 0 0 0 3 1 0 0 3 0 17 1 1858.016 Q12830-4;Q12830-2;Q12830;F5GXF5;F5H176 Q12830-4 811 827 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2;3 1.6013E-131 145.94 By matching By MS/MS By matching By matching By matching By matching 2 1 148710000 0 117750000 0 30959000 0 0 2211 1061 2240 9895;9896;9897 6542;6543 6542 2 EVMLQNGETPK KKEEEEKKEVMLQNGE LQNGETPKDLNDEKQK K E V P K D 0 0 1 0 0 1 2 1 0 0 1 1 1 0 1 0 1 0 0 1 0 11 0 1244.6071 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1645 1655 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 0.00066204 94.767 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 5152900 0 1074900 948400 0 0 3129600 2212 486 2241 9898;9899;9900 6544;6545;6546;6547 6544 4 EVNEGIQALSNSEEEK IAKREVKKEVNEGIQA LSNSEEEKKGVAASLL K E V E K K 1 0 2 0 0 1 5 1 0 1 1 1 0 0 0 2 0 0 0 1 0 16 0 1774.8221 Q8N3X1;Q8N3X1-2 Q8N3X1 303 318 FNBP4 Formin-binding protein 4 yes no 2 0.0061163 47.855 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 5473300 1431100 1149000 1388600 1247400 0 257180 2213 1298 2242 9901;9902;9903;9904;9905 6548;6549;6550 6549 3 EVNEQTHFASMPR DPYGPQTKEVNEQTHF THFASMPRDIYQDYTQ K E V P R D 1 1 1 0 0 1 2 0 1 0 0 0 1 1 1 1 1 0 0 1 0 13 0 1544.7042 O15226;G3V1N1 O15226 82 94 NKRF NF-kappa-B-repressing factor yes no 3 0.0015824 73.082 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 13547000 1677000 1469800 1122000 699690 2909000 5669500 2214 578 2243 9906;9907;9908;9909;9910;9911 6551;6552;6553 6551 3 EVNSQEEEEEELLRK KMSEQEAREVNSQEEE EEEELLRKAIAESLNS R E V R K A 0 1 1 0 0 1 7 0 0 0 2 1 0 0 0 1 0 0 0 1 0 15 1 1859.8749 Q96RL1;F8VQY2;Q96RL1-3;F2Z2T8;Q96RL1-2;D6RC40;D6RCQ3;D6RCF3;Q96RL1-5 Q96RL1 98 112 UIMC1 BRCA1-A complex subunit RAP80 yes no 3 1.1337E-05 89.26 By MS/MS By MS/MS By matching By matching By matching By MS/MS 2 1 1 1 1 1 40095000 3821100 12988000 5453000 1123400 262390 16447000 2215 535 2244 9912;9913;9914;9915;9916;9917;9918 6554;6555;6556 6556 3 EVPEYLNHVSK GQRLMQEREVPEYLNH EYLNHVSKRLEEEGDR R E V S K R 0 0 1 0 0 0 2 0 1 0 1 1 0 0 1 1 0 0 1 2 0 11 0 1313.6616 Q13619;Q13619-2 Q13619 255 265 CUL4A Cullin-4A yes no 3 0.0068726 67.385 By matching By matching By matching By matching By matching By MS/MS 1 965330 0 0 0 0 0 965330 2216 1089 2245 9919 6557 6557 1 EVPMCSDPEPR YTDSEPRQEVPMCSDP MCSDPEPRQEVPTCTG Q E V P R Q 0 1 0 1 1 0 2 0 0 0 0 0 1 0 3 1 0 0 0 1 0 11 0 1315.5537 F2Z2E1;Q96EK7;F5GZX9;F5GY05;Q96EK7-2 F2Z2E1 376 386 FAM120B Constitutive coactivator of peroxisome proliferator-activated receptor gamma yes no 2 0.030492 51.286 By matching By matching By matching By matching By matching By MS/MS 1 750650 0 0 0 0 0 750650 2217 474 2246 9920 6558 6558 1 EVQTNDLKEVVNK KMMEIMTREVQTNDLK DLKEVVNKLIPDSIGK R E V N K L 0 0 2 1 0 1 2 0 0 0 1 2 0 0 0 0 1 0 0 3 0 13 1 1514.794 D6RAT0;P61247;D6RG13;D6R9B6;D6RB09;H0Y9Y4;F5H4F9;E9PFI5 D6RAT0 138 150 RPS3A 40S ribosomal protein S3a yes no 2;3 7.9807E-60 132.86 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 2 1 1 2 2 22867000 4403100 2065300 699680 777430 11196000 3725100 2218 321 2247 9921;9922;9923;9924;9925;9926;9927;9928;9929;9930 6559;6560;6561;6562;6563 6561 5 EVQTVCAGLTR RRLKMYNKEVQTVCAG TVCAGLTRISKEILTQ K E V T R I 1 1 0 0 1 1 1 1 0 0 1 0 0 0 0 0 2 0 0 2 0 11 0 1232.6183 Q5VWQ0;H0YDA9;Q5VWQ0-4 Q5VWQ0 277 287 RSBN1 Round spermatid basic protein 1 yes no 2 0.0036025 81.625 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 5252500 0 840750 534910 0 1097700 2779100 2219 1209 2248 9931;9932;9933;9934 6564;6565;6566 6565 3 EVSDFIQDSGQIKK EFRKRMEKEVSDFIQD QDSGQIKKKFQPMNKI K E V K K K 0 0 0 2 0 2 1 1 0 2 0 2 0 1 0 2 0 0 0 1 0 14 1 1592.8046 I3L0Q5;I3L0X5;I3L4C3;O75391 I3L0Q5 44 57 SPAG7 Sperm-associated antigen 7 yes no 3 0.001653 60.345 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 7603000 1000800 2053100 1340500 919130 521410 1768100 2220 678 2249 9935;9936;9937;9938;9939;9940 6567;6568;6569;6570 6568 4 EVSPGSRDILDGVR SETFDLEREVSPGSRD RDILDGVRIIMADKEV R E V V R I 0 2 0 2 0 0 1 2 0 1 1 0 0 0 1 2 0 0 0 2 0 14 1 1498.774 Q96RL1;F8VQY2;Q96RL1-3;F2Z2T8;Q96RL1-2;D6RCF3;Q96RL1-4;H7BXP9 Q96RL1 461 474 UIMC1 BRCA1-A complex subunit RAP80 yes no 3 0.02726 42.469 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 3112300 0 1412200 0 0 0 1700100 2221 535 2250 9941;9942;9943 6571;6572 6571 2 EVSTAPAGTDMPAAK ________________ GTDMPAAKKQKLSSDE R E V A K K 4 0 0 1 0 0 1 1 0 0 0 1 1 0 2 1 2 0 0 1 0 15 0 1444.6868 O75530-3;O75530;O75530-2;F5GY72;E9PJK2;H0YEL4 O75530-3 5 19 EED Polycomb protein EED yes no 2 0.0034282 56.793 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 8454100 0 1293500 1035800 1032900 2800500 2291400 2222 745 2251 9944;9945;9946;9947;9948 6573;6574 6574 2 EVSTNTAMIQTSK TKSAELNKEVSTNTAM TAMIQTSKTEITELRR K E V S K T 1 0 1 0 0 1 1 0 0 1 0 1 1 0 0 2 3 0 0 1 0 13 0 1408.6868 P13646;CON__P13646-1;P13646-2;C9JA77;P13646-3;CON__ENSEMBL:ENSP00000377550 P13646 306 318 KRT13 Keratin, type I cytoskeletal 13 yes no 2 5.3701E-09 101.45 By matching By matching By matching By matching By matching By MS/MS 1 1 2448300 0 0 836150 0 0 1612100 + 2223 834 2252 9949;9950 6575;6576 6575 2 EVSTYIKK KRYEEIVKEVSTYIKK EVSTYIKKIGYNPDTV K E V K K I 0 0 0 0 0 0 1 0 0 1 0 2 0 0 0 1 1 0 1 1 0 8 1 966.5386 Q5VTE0;P68104;Q6IQ15;F8W6I0 Q5VTE0 173 180 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 2 0.039261 98.458 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 8515200 530050 3493700 4057600 0 433750 0 2224 1006 2253 9951;9952;9953;9954 6577 6577 1 EVVCTTQNTPTVK PDFLQTPKEVVCTTQN TQNTPTVKKSRDTALK K E V V K K 0 0 1 0 1 1 1 0 0 0 0 1 0 0 1 0 4 0 0 3 0 13 0 1475.729 P54132;H0YNU5;H0YLV8 P54132 117 129 BLM Bloom syndrome protein yes no 2 0.0017395 73.927 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 6266500 0 0 904240 450800 900120 4011400 2225 965 2254 9955;9956;9957;9958;9959 6578;6579;6580 6580 3 EWDEFLAKGK VRQKLKAKEWDEFLAK DEFLAKGKRFRVLQPV K E W G K R 1 0 0 1 0 0 2 1 0 0 1 2 0 1 0 0 0 1 0 0 0 10 1 1221.603 Q13111-2;C9JLF8;Q13111-3;Q13111 Q13111-2 667 676 CHAF1A Chromatin assembly factor 1 subunit A yes no 3 0.024951 59.908 By matching By matching By matching By matching By matching By MS/MS 1 3470200 0 0 0 0 0 3470200 2226 258 2255 9960 6581 6581 1 EWGKAICYPPEDYTVLMR E W M R 1 1 0 1 1 0 2 1 0 1 1 1 1 0 2 0 1 1 2 1 0 18 1 2227.0442 REV__Q5JSJ4 yes yes 3;4 0.0018943 54.281 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 2 2 139100000 0 46292000 0 52190000 0 40616000 + 2227 1679 2256 9961;9962;9963;9964;9965 6582;6583;6584 6583 2 EWMPVTK RGGKAEDKEWMPVTKL KEWMPVTKLGRLVKDM K E W T K L 0 0 0 0 0 0 1 0 0 0 0 1 1 0 1 0 1 1 0 1 0 7 0 889.43677 P15880;E9PQD7;E9PMM9;E9PPT0 P15880 59 65 RPS2 40S ribosomal protein S2 yes no 2 0.0060524 95.352 By matching By matching By matching By MS/MS By matching By MS/MS 2 1 1 1 1 2 86528000 18264000 7359500 3858800 13979000 22316000 20750000 2228 839 2257 9966;9967;9968;9969;9970;9971;9972;9973 6585;6586 6586 2 EWSQHINGASHSRR DLPVHSNKEWSQHING NGASHSRRCQLLLEIY K E W R R C 1 2 1 0 0 1 1 1 2 1 0 0 0 0 0 3 0 1 0 0 0 14 1 1663.7927 P43243;A8MXP9;D6REM6;D6R991;H0Y8T4;P43243-2;D6RIA2 P43243 305 318 MATR3 Matrin-3 yes no 3 0.0028068 55.98 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 3744100 0 0 966540 460800 848410 1468300 2229 52 2258 9974;9975;9976;9977 6587;6588 6587 2 EYEAAVEQLK LEQQSKLKEYEAAVEQ EAAVEQLKSEQIRAQA K E Y L K S 2 0 0 0 0 1 3 0 0 0 1 1 0 0 0 0 0 0 1 1 0 10 0 1178.5819 G3V1I6;H0Y2W2;Q9NVI7-2;Q9NVI7 G3V1I6 16 25 ATAD3A ATPase family AAA domain-containing protein 3A no no 2 0.0022251 102.06 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 5188900 0 1319500 0 830940 1432100 1606400 2230 576 2259 9978;9979;9980;9981 6589;6590;6591;6592 6590 4 EYEATLEECCAK SVLLRLAKEYEATLEE TLEECCAKDDPHACYS K E Y A K D 2 0 0 0 2 0 4 0 0 0 1 1 0 0 0 0 1 0 1 0 0 12 0 1501.6065 CON__P02769 CON__P02769 375 386 yes yes 2 1.3397E-117 155.99 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 279360000 32994000 65569000 33195000 26091000 50554000 70959000 + 2231 294 2260 9982;9983;9984;9985;9986;9987;9988 6593;6594;6595;6596;6597;6598;6599;6600;6601;6602;6603;6604;6605;6606 6593 14 EYGFCIMDNHKER EENEKLLKEYGFCIMD IMDNHKERIANFKIEP K E Y E R I 0 1 1 1 1 0 2 1 1 1 0 1 1 1 0 0 0 0 1 0 0 13 1 1697.729 P11387 P11387 337 349 TOP1 DNA topoisomerase 1 yes yes 3;4 0.0095642 56.414 By matching By matching By matching By matching By MS/MS By MS/MS 1 2 2 6267300 0 421070 0 0 3895500 1950700 2232 825 2261 9989;9990;9991;9992;9993 6607;6608 6607 2 EYIKQNPMATEK LKNISIRREYIKQNPM QNPMATEKLLSLLPEY R E Y E K L 1 0 1 0 0 1 2 0 0 1 0 2 1 0 1 0 1 0 1 0 0 12 1 1450.7126 Q29RF7 Q29RF7 981 992 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2;3 0.00049799 96.334 By matching By matching By matching By matching By matching By MS/MS 1 2 3204200 0 0 0 0 278260 2926000 2233 1159 2262 9994;9995;9996 6609;6610 6609 2 EYNVNDDSMK VKKNLLKKEYNVNDDS NVNDDSMKLGGNNTSE K E Y M K L 0 0 2 2 0 0 1 0 0 0 0 1 1 0 0 1 0 0 1 1 0 10 0 1213.4921 Q14527;Q14527-2;E7ESN4;F5H3D6 Q14527 331 340 HLTF Helicase-like transcription factor yes no 2 0.0028315 96.113 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 2 20979000 834790 3689300 8469900 819620 1250100 5914900 2234 1107 2263 9997;9998;9999;10000;10001;10002;10003 6611;6612;6613;6614 6612 4 EYNVNDDSMKLGGNNTSEK VKKNLLKKEYNVNDDS GGNNTSEKADGLSKDA K E Y E K A 0 0 4 2 0 0 2 2 0 0 1 2 1 0 0 2 1 0 1 1 0 19 1 2113.9222 Q14527;Q14527-2;E7ESN4;F5H3D6 Q14527 331 349 HLTF Helicase-like transcription factor yes no 3 4.9161E-66 124.45 By matching By matching By MS/MS By matching By matching By matching 1 1 1 6970500 0 0 4682200 1615800 672500 0 2235 1107 2264 10004;10005;10006 6615 6615 1 EYQEPEVPESNQK LAKLEETKEYQEPEVP EVPESNQKQWQSKRKS K E Y Q K Q 0 0 1 0 0 2 4 0 0 0 0 1 0 0 2 1 0 0 1 1 0 13 0 1575.7053 P33981-2;P33981 P33981-2 373 385 TTK Dual specificity protein kinase TTK yes no 2 3.7934E-09 103.11 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 2 1 29956000 2606700 4494200 6802500 3355000 4763200 7934400 2236 891 2265 10007;10008;10009;10010;10011;10012;10013 6616;6617;6618;6619 6617 4 EYQEYLKRPPESPPIVEEWNSR SRFTENDKEYQEYLKR IVEEWNSRAGGNQRNR K E Y S R A 0 2 1 0 0 1 5 0 0 1 1 1 0 0 4 2 0 1 2 1 0 22 2 2745.3398 Q9BTL3 Q9BTL3 25 46 FAM103A1 RNMT-activating mini protein yes yes 4 0.029788 36.687 By matching By matching By matching By matching By matching By MS/MS 1 14582000 0 0 0 0 0 14582000 2237 1448 2266 10014 6620 6620 0 EYQMELK QTQGQKVKEYQMELKY KEYQMELKYLKQYKEK K E Y L K Y 0 0 0 0 0 1 2 0 0 0 1 1 1 0 0 0 0 0 1 0 0 7 0 939.43717 Q92878-2;Q92878;Q92878-3;E7EN38;E7ESD9 Q92878-2 211 217 RAD50 DNA repair protein RAD50 yes no 2 0.0074562 94.262 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 4807600 0 741020 526070 0 1298200 2242300 2238 1362 2267 10015;10016;10017;10018 6621 6621 1 EYSGFAGVSRPR FKTHHEMKEYSGFAGV FAGVSRPRGTFFRIRG K E Y P R G 1 2 0 0 0 0 1 2 0 0 0 0 0 1 1 2 0 0 1 1 0 12 1 1324.6524 Q9NYF8-2;Q9NYF8;Q9NYF8-4;H0YF14;Q9NYF8-3;E9PK91;H0YF63 Q9NYF8-2 783 794 BCLAF1 Bcl-2-associated transcription factor 1 no no 3 0.00017871 96.756 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2 1 24501000 4720500 1561300 3967100 2536700 3999300 7716200 2239 1563;452 2268 10019;10020;10021;10022;10023;10024;10025;10026 6622;6623;6624;6625;6626;6627;6628 6623 7 EYSIGTGSTKQEAK YKCKMGQKEYSIGTGS GSTKQEAKQLAAKLAY K E Y A K Q 1 0 0 0 0 1 2 2 0 1 0 2 0 0 0 2 2 0 1 0 0 14 1 1497.7311 Q05CP4;E9PC80;P19525 Q05CP4 141 154 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes no 2;3 7.3535E-08 98.337 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 2 2 15645000 1605200 1877300 3903200 2252000 2515200 3492100 2240 412 2269 10027;10028;10029;10030;10031;10032;10033;10034;10035;10036;10037;10038 6629;6630;6631;6632;6633;6634;6635;6636;6637 6632 9 EYSSELNAPSQESDSHPR GAIEVLIREYSSELNA QESDSHPRKKKKEKKE R E Y P R K 1 1 1 1 0 1 3 0 1 0 1 0 0 0 2 5 0 0 1 0 0 18 0 2031.877 P49756;P49756-2;P49756-3;E9PQU5 P49756 217 234 RBM25 RNA-binding protein 25 yes no 3 0.0065794 43.955 By matching By MS/MS By matching By matching By matching By matching 1 1 952250 0 601430 350820 0 0 0 2241 942 2270 10039;10040 6638 6638 1 EYVAAQLR LDSFCDSKEYVAAQLR EYVAAQLRQLPAQPPE K E Y L R Q 2 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 8 0 948.50288 Q14151;A8MXT5;B4DU53 Q14151 164 171 SAFB2 Scaffold attachment factor B2 yes no 2 0.014854 87.181 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 14289000 0 2410000 2478100 694220 3773500 4933600 2242 1097 2271 10041;10042;10043;10044;10045 6639;6640;6641 6639 3 EYVAAQLRQLPAQPPEHAVDGEGFK LDSFCDSKEYVAAQLR AVDGEGFKNTLETSSL K E Y F K N 4 1 0 1 0 3 3 2 1 0 2 1 0 1 3 0 0 0 1 2 0 25 1 2749.3824 Q14151;B4DU53 Q14151 164 188 SAFB2 Scaffold attachment factor B2 yes no 3;4 2.1177E-08 60.347 By matching By MS/MS By matching By matching By matching By matching 2 27420000 0 27420000 0 0 0 0 2243 1097 2272 10046;10047 6642;6643 6643 2 EYVCVKCCAEEDK QQMGEEDKEYVCVKCC KCCAEEDKKTEILDPD K E Y D K K 1 0 0 1 3 0 3 0 0 0 0 2 0 0 0 0 0 0 1 2 0 13 1 1688.6844 Q92576-2;Q92576;E7EVH3;E9PE34;B3KP41;E7ER40 Q92576-2 675 687 PHF3 PHD finger protein 3 yes no 3 0.0059126 60.157 By matching By matching By matching By MS/MS By matching By matching 1 1 1204700 700760 0 0 503930 0 0 2244 1353 2273 10048;10049 6644 6644 1 EYYTQNMER MPKSDVNKEYYTQNME YYTQNMEREISNSDGT K E Y E R E 0 1 1 0 0 1 2 0 0 0 0 0 1 0 0 0 1 0 2 0 0 9 0 1232.5132 E5RJW4;Q9NW64;E5RHA8;Q9NW64-2;F5GWK3 E5RJW4 108 116 RBM22 Pre-mRNA-splicing factor RBM22 yes no 2 0.0063088 92.538 By matching By MS/MS By matching By matching By matching By matching 1 1 1 4768900 0 1509000 399500 0 0 2860500 2245 345 2274 10050;10051;10052 6645 6645 1 FAALDNEEEDK GKAKPQNKFAALDNEE LDNEEEDKEEEIIKEK K F A D K E 2 0 1 2 0 0 3 0 0 0 1 1 0 1 0 0 0 0 0 0 0 11 0 1279.5568 E9PC67;F8VQZ0;Q5STZ8;Q8NE71;Q8NE71-2 Q8NE71 193 203 ABCF1 ATP-binding cassette sub-family F member 1 no no 2 7.1951E-08 109.39 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 37382000 15282000 12247000 9852400 0 0 0 2246 1321;411 2275 10053;10054;10055 6646;6647;6648 6647 3 FAANPNQNKNVALLSQLYHSPAR SSEPITVKFAANPNQN QLYHSPARRFGGPVHH K F A A R R 4 1 4 0 0 2 0 0 1 0 3 1 0 1 2 2 0 0 1 1 0 23 1 2552.3248 Q15717 Q15717 183 205 ELAVL1 ELAV-like protein 1 yes yes 4 3.2508E-84 119.62 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 48388000 0 8413400 35874000 0 4101200 0 2247 1146 2276 10056;10057;10058 6649;6650;6651;6652 6649 4 FAANPNQNKNVALLSQLYHSPARR SSEPITVKFAANPNQN LYHSPARRFGGPVHHQ K F A R R F 4 2 4 0 0 2 0 0 1 0 3 1 0 1 2 2 0 0 1 1 0 24 2 2708.4259 Q15717 Q15717 183 206 ELAVL1 ELAV-like protein 1 yes yes 5 4.8259E-05 59.342 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 37938000 0 0 16589000 15073000 6276300 0 2248 1146 2277 10059;10060;10061 6653;6654 6654 2 FAAQNLHQNLIR HGGIRASKFAAQNLHQ NLHQNLIRKFPKGDVI K F A I R K 2 1 2 0 0 2 0 0 1 1 2 0 0 1 0 0 0 0 0 0 0 12 0 1423.7684 Q9H0C8;E9PC05 Q9H0C8 162 173 ILKAP Integrin-linked kinase-associated serine/threonine phosphatase 2C yes no 3 0.0015215 82.831 By matching By matching By matching By matching By matching By MS/MS 1 1 1 6442100 806410 0 0 0 2226900 3408800 2249 1478 2278 10062;10063;10064 6655 6655 1 FAAQNLHQNLIRKFPK HGGIRASKFAAQNLHQ NLIRKFPKGDVISVEK K F A P K G 2 1 2 0 0 2 0 0 1 1 2 2 0 2 1 0 0 0 0 0 0 16 2 1924.0795 Q9H0C8;E9PC05 Q9H0C8 162 177 ILKAP Integrin-linked kinase-associated serine/threonine phosphatase 2C yes no 4 0.0032523 65.043 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 17718000 0 0 12335000 1648200 0 3734900 2250 1478 2279 10065;10066;10067 6656;6657 6656 2 FAASGGFLHHMAGLSSSK SVPTKQMKFAASGGFL MAGLSSSKLSMSKALP K F A S K L 3 0 0 0 0 0 0 3 2 0 2 1 1 2 0 4 0 0 0 0 0 18 0 1803.8726 Q9BY77;Q9BY77-2;B4DMM2;F8WCX5 Q9BY77 201 218 POLDIP3 Polymerase delta-interacting protein 3 yes no 3;4 1.963E-20 97.073 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 91196000 26347000 0 46856000 0 11508000 6484800 2251 1465 2280 10068;10069;10070;10071 6658;6659;6660;6661 6660 2 FACHSASLTVR RGKQLRVRFACHSASL HSASLTVRNLPQYVSN R F A V R N 2 1 0 0 1 0 0 0 1 0 1 0 0 1 0 2 1 0 0 1 0 11 0 1247.6081 Q15233;F5GYZ3;C9JYS8;C9IZL7 Q15233 143 153 NONO Non-POU domain-containing octamer-binding protein yes no 3 1.8481E-86 150.15 By MS/MS By MS/MS By matching By matching By MS/MS By matching 3 1 1 1 1 1 17781000 3445000 2192500 2161400 2324900 4606800 3050200 2252 1133 2281 10072;10073;10074;10075;10076;10077;10078;10079 6662;6663;6664;6665 6664 4 FACPECPK RTHTGEKKFACPECPK FACPECPKRFMRSDHL K F A P K R 1 0 0 0 2 0 1 0 0 0 0 1 0 1 2 0 0 0 0 0 0 8 0 1007.4205 P08047;G5E9M8 P08047 686 693 SP1 Transcription factor Sp1 yes no 2 1.9016E-16 130.22 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 13565000 2512100 0 1388600 870330 4360900 4433000 2253 804 2282 10080;10081;10082;10083;10084 6666;6667;6668;6669 6669 4 FAEAECLAESHQHLSK PAMALHARFAEAECLA ESHQHLSKESLAGNKP R F A S K E 3 0 0 0 1 1 3 0 2 0 2 1 0 1 0 2 0 0 0 0 0 16 0 1855.8523 H7C0J3;H7C3H7;I3L229;Q12873;E9PG89;Q12873-2 Q12873 1833 1848 CHD3 Chromodomain-helicase-DNA-binding protein 3 no no 3;4 1.5315E-37 115.04 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 3 3 107690000 6321500 24958000 21458000 3465900 9551700 41933000 2254 430;663 2283 10085;10086;10087;10088;10089;10090;10091;10092;10093;10094;10095;10096;10097;10098 6670;6671;6672;6673;6674;6675;6676;6677;6678;6679;6680 6678 11 FAEALGSTEAK VDQLFCKKFAEALGST ALGSTEAKAVPYQKFE K F A A K A 3 0 0 0 0 0 2 1 0 0 1 1 0 1 0 1 1 0 0 0 0 11 0 1122.5557 P78347-2;P78347-4;P78347-3;B4DH52;P78347 P78347-2 437 447 GTF2I General transcription factor II-I yes no 2 2.5958E-09 109.72 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 5828100 0 0 0 2060200 3767900 0 2255 90 2284 10099;10100;10101;10102 6681;6682;6683;6684 6682 4 FAEEFYSFRR NFTVSAAKFAEEFYSF EEFYSFRRRKTIGGKC K F A R R R 1 2 0 0 0 0 2 0 0 0 0 0 0 3 0 1 0 0 1 0 0 10 1 1350.6357 C9K0Y1;Q96GN5-4;Q96GN5-2;Q96GN5 C9K0Y1 247 256 CDCA7L Cell division cycle-associated 7-like protein yes no 3 0.0048254 76.221 By matching By matching By matching By matching By matching By MS/MS 1 10725000 0 0 0 0 0 10725000 2256 280 2285 10103 6685 6685 1 FAEEQLLK EVKSRGMKFAEEQLLK FAEEQLLKHGWTQGKG K F A L K H 1 0 0 0 0 1 2 0 0 0 2 1 0 1 0 0 0 0 0 0 0 8 0 976.52295 Q5T3I0;Q5T3I0-3;E9PAV9;F8W895;E9PPY4;F2Z3C6 Q5T3I0 14 21 GPATCH4 G patch domain-containing protein 4 yes no 2 0.023129 77.318 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 14494000 2435100 3026500 0 4849100 724250 3458700 2257 1191 2286 10104;10105;10106;10107;10108 6686 6686 1 FAEMEER KRKNKDPKFAEMEERF KFAEMEERFYRYGIKP K F A E R F 1 1 0 0 0 0 3 0 0 0 0 0 1 1 0 0 0 0 0 0 0 7 0 910.38547 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 579 585 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 0.022126 87.754 By matching By matching By matching By matching By matching By MS/MS 1 1 13083000 0 2095300 0 0 0 10988000 2258 486 2287 10109;10110 6687 6687 1 FAEVECLAESHQHLSK PSMALNTRFAEVECLA ESHQHLSKESMAGNKP R F A S K E 2 0 0 0 1 1 3 0 2 0 2 1 0 1 0 2 0 0 0 1 0 16 0 1883.8836 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1796 1811 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2;3;4 2.0496E-37 113.43 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 1 2 3 95654000 2019300 27194000 24020000 817940 3161900 38441000 2259 486 2288 10111;10112;10113;10114;10115;10116;10117;10118;10119;10120;10121 6688;6689;6690;6691;6692;6693;6694;6695 6689 8 FAEVTQEVEVARPVDK EENLQVMRFAEVTQEV EVARPVDKAICGLTPG R F A D K A 2 1 0 1 0 1 3 0 0 0 0 1 0 1 1 0 1 0 0 4 0 16 1 1815.9367 Q02241-2;H7BYN4;Q02241;B4E1K0;H0YKQ5 Q02241-2 429 444 KIF23 Kinesin-like protein KIF23 yes no 3 0.010089 45.438 By matching By matching By matching By MS/MS By matching By matching 1 1887400 0 0 0 1887400 0 0 2260 660 2289 10122 6696 6696 1 FAFDYATK AKSQRIAKFAFDYATK FAFDYATKKGRGKVTA K F A T K K 2 0 0 1 0 0 0 0 0 0 0 1 0 2 0 0 1 0 1 0 0 8 0 961.45453 O43837-3;O43837-2;O43837 O43837-3 48 55 IDH3B Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial yes no 2 0.0036054 109.71 By MS/MS By matching By matching By matching By matching By matching 1 5305800 5305800 0 0 0 0 0 2261 723 2290 10123 6697 6697 1 FAGSAGWEGTESLKKPEDK LIKSINEKFAGSAGWE SLKKPEDKKQLGDFFG K F A D K K 2 0 0 1 0 0 3 3 0 0 1 3 0 1 1 2 1 1 0 0 0 19 2 2035.9851 Q13123 Q13123 414 432 IK Protein Red yes yes 3;4 0.001317 66.809 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 2 2 20013000 2424200 2502900 2903900 1767400 2968200 7446800 2262 1071 2291 10124;10125;10126;10127;10128;10129;10130;10131;10132;10133;10134;10135 6698;6699;6700;6701;6702;6703;6704 6700 7 FAGSSPSQSSMVAR FGLARFSRFAGSSPSQ SQSSMVARTQTVRGTL R F A A R T 2 1 0 0 0 1 0 1 0 0 0 0 1 1 1 5 0 0 0 1 0 14 0 1410.6562 H7C2I6;H7C224;P51617-4;P51617-2;P51617-3;D3YTB5;P51617 H7C2I6 40 53 IRAK1 Interleukin-1 receptor-associated kinase 1 yes no 2 0.0065412 54.09 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2395700 0 0 255990 0 992720 1146900 2263 313 2292 10136;10137;10138 6705;6706 6705 2 FAIGSQVSEHSIIK IEKQLKRRFAIGSQVS VSEHSIIKDFTKQKYP R F A I K D 1 0 0 0 0 1 1 1 1 3 0 1 0 1 0 3 0 0 0 1 0 14 0 1514.8093 P33992;B1AHB1 P33992 683 696 MCM5 DNA replication licensing factor MCM5 yes no 3 9.1591E-13 102.9 By matching By MS/MS By matching By matching By matching By matching 1 5163000 0 5163000 0 0 0 0 2264 892 2293 10139 6707 6707 1 FALPQYLK KISQRYQKFALPQYLK FALPQYLKTVYQHQKA K F A L K T 1 0 0 0 0 1 0 0 0 0 2 1 0 1 1 0 0 0 1 0 0 8 0 978.55385 CON__P02663 CON__P02663 174 181 yes yes 2 0.0015751 111.65 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 286630000 22341000 0 0 0 264290000 0 + 2265 289 2294 10140;10141 6708;6709 6708 2 FALVAPVQAEEDSGNVNGK QRARYNTKFALVAPVQ DSGNVNGKKRNHTKRI K F A G K K 3 0 2 1 0 1 2 2 0 0 1 1 0 1 1 1 0 0 0 3 0 19 0 1943.9589 O96028-5;O96028-3;O96028;H0Y9L4 O96028-5 506 524 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 2 2.5534E-06 87.24 By matching By MS/MS By matching By matching By matching By matching 1 17374000 0 17374000 0 0 0 0 2266 779 2295 10142 6710 6710 1 FALVAPVQAEEDSGNVNGKK QRARYNTKFALVAPVQ SGNVNGKKRNHTKRIQ K F A K K R 3 0 2 1 0 1 2 2 0 0 1 2 0 1 1 1 0 0 0 3 0 20 1 2072.0538 O96028-5;O96028-3;O96028;H0Y9L4 O96028-5 506 525 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 3 4.1138E-07 87.24 By matching By MS/MS By matching By matching By matching By matching 1 17942000 0 17942000 0 0 0 0 2267 779 2296 10143 6711 6711 1 FAQASTLTYHVR VCDRCGQRFAQASTLT STLTYHVRRHTGEKPY R F A V R R 2 1 0 0 0 1 0 0 1 0 1 0 0 1 0 1 2 0 1 1 0 12 0 1392.715 Q9NPC7-3;Q9NPC7-2;Q9NPC7 Q9NPC7-3 424 435 MYNN Myoneurin yes no 3 0.024028 48.044 By matching By matching By matching By matching By matching By MS/MS 1 1 1837500 0 461870 0 0 0 1375600 2268 1524 2297 10144;10145 6712 6712 1 FAQHGTFEYEYSQR KERETPPRFAQHGTFE FEYEYSQRWKSLDEME R F A Q R W 1 1 0 0 0 2 2 1 1 0 0 0 0 2 0 1 1 0 2 0 0 14 0 1761.7747 P23246;P23246-2;H0Y9K7 P23246 480 493 SFPQ Splicing factor, proline- and glutamine-rich yes no 3 0.00035641 87.863 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 2 1 34335000 8786900 1050900 8226100 4837200 5397100 6037100 2269 865 2298 10146;10147;10148;10149;10150;10151;10152;10153 6713;6714;6715;6716;6717;6718 6715 6 FAQIDEK KKKQIEQKFAQIDEKT KFAQIDEKTEKAKEER K F A E K T 1 0 0 1 0 1 1 0 0 1 0 1 0 1 0 0 0 0 0 0 0 7 0 849.42323 Q9NQS7-2;Q9NQS7 Q9NQS7-2 599 605 INCENP Inner centromere protein yes no 2 0.015202 89.752 By matching By matching By MS/MS By matching By matching By matching 1 2173400 0 0 2173400 0 0 0 2270 1531 2299 10154 6719 6719 1 FAQPGSFEYEYAMR KEREQPPRFAQPGSFE FEYEYAMRWKALIEME R F A M R W 2 1 0 0 0 1 2 1 0 0 0 0 1 2 1 1 0 0 2 0 0 14 0 1694.7399 Q15233;F5GYZ3;C9JYS8;H7C367 Q15233 257 270 NONO Non-POU domain-containing octamer-binding protein yes no 2 0.0041932 77.776 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 77127000 35305000 0 23498000 14227000 4097700 0 2271 1133 2300 10155;10156;10157;10158;10159 6720;6721;6722;6723;6724 6724 141 5 FARHVEPGNAAIREK EYTINNLKFARHVEPG GNAAIREKLAWAKEKY K F A E K L 3 2 1 0 0 0 2 1 1 1 0 1 0 1 1 0 0 0 0 1 0 15 2 1693.9012 H3BPK3;H3BPQ4;Q16775-2;Q16775 H3BPK3 161 175 HAGH Hydroxyacylglutathione hydrolase, mitochondrial yes no 4 0.00090194 69.878 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2604900 0 0 273950 705400 554280 1071300 2272 637 2301 10160;10161;10162;10163 6725;6726 6725 2 FASHCLMNHPDLAK PVRLESVKFASHCLMN MNHPDLAKDLTEYLKV K F A A K D 2 0 1 1 1 0 0 0 2 0 2 1 1 1 1 1 0 0 0 0 0 14 0 1639.7599 Q29RF7;Q29RF7-3;Q9NTI5-3;B7Z5S1;Q9NTI5-2;Q9NTI5 Q29RF7 346 359 PDS5A;PDS5B Sister chromatid cohesion protein PDS5 homolog A;Sister chromatid cohesion protein PDS5 homolog B yes no 3 1.7522E-124 153.32 By matching By matching By matching By matching By matching By MS/MS 1 1 1 16371000 0 990370 0 0 3417900 11963000 2273 1159 2302 10164;10165;10166 6727 6727 1 FASWALESDNNTALLLSKK KHQEHILRFASWALES TALLLSKKLIYFQLHR R F A K K L 3 0 2 1 0 0 1 0 0 0 4 2 0 1 0 3 1 1 0 0 0 19 1 2107.095 Q13263-2;Q13263 Q13263-2 266 284 TRIM28 Transcription intermediary factor 1-beta yes no 3 0.03759 29.422 By matching By MS/MS By matching By matching By matching By matching 1 7531900 0 7531900 0 0 0 0 2274 1076 2303 10167 6728 6728 1 FATHAAALSVR RGRQLRVRFATHAAAL HAAALSVRNLSPYVSN R F A V R N 4 1 0 0 0 0 0 0 1 0 1 0 0 1 0 1 1 0 0 1 0 11 0 1142.6196 P23246;P23246-2 P23246 366 376 SFPQ Splicing factor, proline- and glutamine-rich yes no 2 0.0050529 73.951 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 3484800 1683300 824140 977370 0 0 0 2275 865 2304 10168;10169;10170 6729;6730 6729 2 FAVHRITPEEAK LIYDTKGRFAVHRITP RITPEEAKYKLCKVRK R F A A K Y 2 1 0 0 0 0 2 0 1 1 0 1 0 1 1 0 1 0 0 1 0 12 1 1396.7463 P62701;A6NH36 P62701 109 120 RPS4X 40S ribosomal protein S4, X isoform yes no 3 0.032449 46.955 By matching By matching By matching By matching By MS/MS By matching 1 2107000 0 0 0 0 2107000 0 2276 993 2305 10171 6731 6731 1 FAVRDMRQTVAVGVIK SDYPPLGRFAVRDMRQ TVAVGVIKAVDKKAAG R F A I K A 2 2 0 1 0 1 0 1 0 1 0 1 1 1 0 0 1 0 0 4 0 16 2 1789.0033 Q5VTE0;P68104;Q6IQ15;Q05639 Q5VTE0 424 439 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 3;4 5.3025E-18 101.75 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 2 1 1 71007000 10355000 9936000 5594800 25266000 6695300 13160000 2277 1006 2306 10172;10173;10174;10175;10176;10177;10178;10179 6732;6733;6734;6735;6736;6737 6734 6 FAYRGVLNSPVK TLINYMAKFAYRGVLN GVLNSPVKAVRDTLIT K F A V K A 1 1 1 0 0 0 0 1 0 0 1 1 0 1 1 1 0 0 1 2 0 12 1 1349.7456 E7EP00;G5EA31;P53992;B4DZT4 E7EP00 735 746 SEC24C Protein transport protein Sec24C yes no 3 0.0030602 72.289 By matching By matching By matching By matching By matching By MS/MS 1 2799800 0 0 0 0 0 2799800 2278 354 2307 10180 6738 6738 1 FCAFGGNPPVTGPR IPPGLRPRFCAFGGNP NPPVTGPRSALAPNLL R F C P R S 1 1 1 0 1 0 0 3 0 0 0 0 0 2 3 0 1 0 0 1 0 14 0 1475.698 O15446;O15446-2 O15446 149 162 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes no 2 6.4849E-42 122.1 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 38169000 0 8016000 0 5432600 0 24720000 2279 706 2308 10181;10182;10183 6739;6740;6741 6741 3 FCCAVFAK VCAIKVEKFCCAVFAK FCCAVFAKVPSSWQVK K F C A K V 2 0 0 0 2 0 0 0 0 0 0 1 0 2 0 0 0 0 0 1 0 8 0 1001.4463 Q08AF3;Q08AF3-2;B4E128;Q8IYM2;F5H6G3;Q6IEE8-2;Q6IEE8 Q08AF3 301 308 SLFN5;SLFN12;SLFN12L Schlafen family member 5;Schlafen family member 12;Schlafen family member 12-like yes no 2 0.0074275 97.602 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4282000 0 0 0 759540 1585900 1936600 2280 1049 2309 10184;10185;10186 6742 6742 1 FCEADVSSDLRK TTDVKKSKFCEADVSS DVSSDLRKEVENHYKL K F C R K E 1 1 0 2 1 0 1 0 0 0 1 1 0 1 0 2 0 0 0 1 0 12 1 1425.6558 Q9NWY4;A8MVJ9 Q9NWY4 28 39 C4orf27 UPF0609 protein C4orf27;Putative UPF0609 protein C4orf27-like yes no 3 0.020096 44.829 By matching By matching By matching By matching By matching By MS/MS 1 1 1 7147600 0 0 0 2036000 1385800 3725700 2281 1558 2310 10187;10188;10189 6743 6743 1 FCECDNFNCDRSNGLICGGNGVCK TNEIYSGKFCECDNFN CGGNGVCKCRVCECNP K F C C K C 0 1 4 2 5 0 1 4 0 1 1 1 0 2 0 1 0 0 0 1 0 24 1 2852.1193 P05556;H7C4N8;P05556-2;P05556-5;P05556-4;P05556-3 P05556 552 575 ITGB1 Integrin beta-1 yes no 3 6.4322E-09 74.776 By matching By matching By matching By matching By matching By MS/MS 1 1 4262900 0 758390 0 0 0 3504500 2282 798 2311 10190;10191 6744;6745 6745 2 FCIQEIEK PAAISTAKFCIQEIEK FCIQEIEKSGGSKEAT K F C E K S 0 0 0 0 1 1 2 0 0 2 0 1 0 1 0 0 0 0 0 0 0 8 0 1065.5165 Q5JTH9-2;E9PCK7;Q5JTH9 Q5JTH9-2 187 194 RRP12 RRP12-like protein yes no 2 1.4398E-25 136.27 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 59672000 26313000 5531100 0 4913300 0 22914000 2283 414 2312 10192;10193;10194;10195;10196 6746;6747;6748 6748 3 FCSFSCESSSSLK ATSYYWCKFCSFSCES CESSSSLKLLEHYGKQ K F C L K L 0 0 0 0 2 0 1 0 0 0 1 1 0 2 0 6 0 0 0 0 0 13 0 1524.6225 Q9UHF7;Q9UHF7-3;Q9UHF7-2;E5RJ97 Q9UHF7 438 450 TRPS1 Zinc finger transcription factor Trps1 yes no 2 0.015794 51.135 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2330200 0 584200 414200 0 0 1331800 2284 1594 2313 10197;10198;10199 6749 6749 1 FCVDYAK PCEMAEQRFCVDYAKR RFCVDYAKRGTAGCKK R F C A K R 1 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 0 1 1 0 7 0 901.40039 P49916-2;P49916 P49916-2 93 99 LIG3 DNA ligase 3 yes no 2 0.027408 86.472 By matching By matching By matching By matching By MS/MS By matching 1 1 1 3742100 608670 0 0 0 1358100 1775300 2285 947 2314 10200;10201;10202 6750;6751 6750 2 FDDAVVQSDMK AKRLIGRRFDDAVVQS AVVQSDMKHWPFMVVN R F D M K H 1 0 0 3 0 1 0 0 0 0 0 1 1 1 0 1 0 0 0 2 0 11 0 1253.5598 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 P11142 78 88 HSPA8 Heat shock cognate 71 kDa protein yes no 2 0.013088 61.233 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1898100 404400 686360 0 0 807340 0 2286 824 2315 10203;10204;10205 6752 6752 1 FDECVLDK HCRKQQAKFDECVLDK FDECVLDKLGWVRPDL K F D D K L 0 0 0 2 1 0 1 0 0 0 1 1 0 1 0 0 0 0 0 1 0 8 0 1024.4535 F5H7V7;P51970 F5H7V7 107 114 NDUFA8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes no 2 6.7561E-05 114.89 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 4920900 113000 1669900 0 0 0 3138000 2287 529 2316 10206;10207;10208 6753;6754 6753 2 FDEIFSATR EGKALKQKFDEIFSAT DEIFSATRYIKALETL K F D T R Y 1 1 0 1 0 0 1 0 0 1 0 0 0 2 0 1 1 0 0 0 0 9 0 1084.5189 Q92878-2;Q92878;Q92878-3;E7EN38;E7ESD9;C9JNH8 Q92878-2 182 190 RAD50 DNA repair protein RAD50 yes no 2 0.014686 77.533 By MS/MS By matching By matching By matching By matching By matching 1 2372100 2372100 0 0 0 0 0 2288 1362 2317 10209 6755 6755 1 FDENGLPTHDMEGK SETDKYSKFDENGLPT PTHDMEGKELSKGQAK K F D G K E 0 0 1 2 0 0 2 2 1 0 1 1 1 1 1 0 1 0 0 0 0 14 0 1588.6828 P49589;P49589-3;A8MVQ3 P49589 701 714 CARS Cysteine--tRNA ligase, cytoplasmic yes no 3 7.944E-05 89.747 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 10695000 2736400 926980 1124400 2959700 2947400 0 2289 938 2318 10210;10211;10212;10213;10214 6756 6756 1 FDENYAFLHR QQFMPWYKFDENYAFL ENYAFLHRTLKEILRY K F D H R T 1 1 1 1 0 0 1 0 1 0 1 0 0 2 0 0 0 0 1 0 0 10 0 1310.6044 B0QYD2;Q9UH17;Q9UH17-2;B0QYD3 B0QYD2 174 183 APOBEC3B DNA dC->dU-editing enzyme APOBEC-3B yes no 3 0.015634 64.654 By matching By matching By matching By matching By matching By MS/MS 1 1468400 0 0 0 0 0 1468400 2290 56 2319 10215 6757 6757 1 FDEVFSNK KGGNGSSKFDEVFSNK FDEVFSNKRTTLSTKW K F D N K R 0 0 1 1 0 0 1 0 0 0 0 1 0 2 0 1 0 0 0 1 0 8 0 984.45526 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 20 27 WAPAL Wings apart-like protein homolog yes no 2 8.6105E-16 127.68 By MS/MS By matching By matching By matching By matching By MS/MS 2 1 1 1 1 1 58448000 14975000 3971600 8315600 6976100 13618000 10592000 2291 1253 2320 10216;10217;10218;10219;10220;10221;10222 6758;6759;6760 6759 3 FDFDACNEVPPAPK DSKEDGRKFDFDACNE NEVPPAPKESSTSEGA K F D P K E 2 0 1 2 1 0 1 0 0 0 0 1 0 2 3 0 0 0 0 1 0 14 0 1605.7133 Q14151;A8MXT5;C9JPX0;F5GXS4;Q15424;F5H1L1;F5H0H3;F5GZU3;B7Z959;B7Z2F6 Q14151 356 369 SAFB2;SAFB Scaffold attachment factor B2;Scaffold attachment factor B1 no no 2 3.1485E-56 130.66 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 79054000 12049000 16905000 10514000 7702000 5264300 26619000 2292 1097;1137 2321 10223;10224;10225;10226;10227;10228 6761;6762;6763;6764;6765;6766;6767;6768 6766 8 FDFDACNEVPPAPKESSTSEGADQK DSKEDGRKFDFDACNE TSEGADQKMSSFKEEK K F D Q K M 3 0 1 3 1 1 3 1 0 0 0 2 0 2 3 3 1 0 0 1 0 25 1 2725.1814 Q14151;A8MXT5;C9JPX0;F5GXS4;Q15424;F5H1L1;F5H0H3;F5GZU3;B7Z959;B7Z2F6 Q14151 356 380 SAFB2;SAFB Scaffold attachment factor B2;Scaffold attachment factor B1 no no 3 1.57E-79 116.45 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 78687000 21758000 6132700 26566000 7009400 4567600 12653000 2293 1097;1137 2322 10229;10230;10231;10232;10233;10234 6769;6770;6771;6772;6773;6774;6775;6776 6771 8 FDGSENRPFSPSPLNNISSTVTVKNNQETMIK QTFITLEKFDGSENRP NNQETMIKTDFLPKAK K F D I K T 0 1 5 1 0 1 2 1 0 2 1 2 1 2 3 5 3 0 0 2 0 32 2 3550.7362 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1227 1258 RIF1 Telomere-associated protein RIF1 yes no 4 2.4108E-11 54.363 By matching By MS/MS By matching By matching By matching By matching 1 8976500 0 8976500 0 0 0 0 2294 1201 2323 10235 6777 6777 1 FDLMYAK AWARLDHKFDLMYAKR KFDLMYAKRAFVHWYV K F D A K R 1 0 0 1 0 0 0 0 0 0 1 1 1 1 0 0 0 0 1 0 0 7 0 886.42588 G3V1U9;Q9BQE3;Q71U36;P68363;F5H5D3;F8VXZ4;Q6PEY2;Q13748;Q9NY65-2;Q9NY65;C9J2C0;F8VWX4;E7ET24;A6NHL2-2;A6NHL2;A8MUB1;P68366 G3V1U9 360 366 TUBA1A;TUBA1C;TUBA1B;TUBA3E;TUBA3C;TUBA8;TUBAL3;TUBA4A Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain;Tubulin alpha chain-like 3;Tubulin alpha-4A chain no no 2 2.8941E-13 128.86 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 48747000 0 10133000 0 1455100 0 37159000 2295 518;44 2324 10236;10237;10238 6778;6779 6778 2 FDNIGMNAMANKDNASLK LDENMGSKFDNIGMNA NKDNASLKQLRWEAER K F D L K Q 3 0 4 2 0 0 0 1 0 1 1 2 2 1 0 1 0 0 0 0 0 18 1 1952.9084 Q03701 Q03701 994 1011 CEBPZ CCAAT/enhancer-binding protein zeta yes yes 3 0.030882 35.624 By matching By matching By matching By matching By matching By MS/MS 1 1 2757100 0 765970 0 0 0 1991100 2296 1037 2325 10239;10240 6780 6780 1 FDRNSNDYDTSEK LLFPPTYKFDRNSNDY NDYDTSEKKRKPAWTD K F D E K K 0 1 2 3 0 0 1 0 0 0 0 1 0 1 0 2 1 0 1 0 0 13 1 1589.6594 C9JZB0;F5GXZ0;B7Z4V9;Q9BT40-2;Q9BT40 C9JZB0 157 169 INPP5K Inositol polyphosphate 5-phosphatase K yes no 3 0.013829 52.5 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 5709400 0 1035500 1171600 622230 1203200 1676800 2297 188 2326 10241;10242;10243;10244;10245 6781 6781 1 FDRNSNDYDTSEKK LLFPPTYKFDRNSNDY DYDTSEKKRKPAWTDR K F D K K R 0 1 2 3 0 0 1 0 0 0 0 2 0 1 0 2 1 0 1 0 0 14 2 1717.7544 C9JZB0;F5GXZ0;B7Z4V9;Q9BT40-2;Q9BT40 C9JZB0 157 170 INPP5K Inositol polyphosphate 5-phosphatase K yes no 3 0.0043233 83.877 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 3432300 0 258020 721350 242150 649420 1561400 2298 188 2327 10246;10247;10248;10249;10250 6782;6783 6783 2 FDSEYER ETSHNYHKFDSEYERM KFDSEYERMGRGPGPL K F D E R M 0 1 0 1 0 0 2 0 0 0 0 0 0 1 0 1 0 0 1 0 0 7 0 944.38758 P43243;A8MXP9;D6REM6;D6R991;H0Y8T4 P43243 246 252 MATR3 Matrin-3 yes no 2 0.019919 105.39 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 5738600 523780 1592600 2247700 353970 338890 681640 2299 52 2328 10251;10252;10253;10254;10255;10256 6784 6784 1 FDSLTDLVEHYK YDVGGGERFDSLTDLV TDLVEHYKKNPMVETL R F D Y K K 0 0 0 2 0 0 1 0 1 0 2 1 0 1 0 1 1 0 1 1 0 12 0 1465.7089 Q06124;Q06124-2;Q06124-3;H0YF12 Q06124 187 198 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes no 2 0.032193 46.844 By matching By matching By matching By matching By MS/MS By matching 1 3724700 0 0 0 0 3724700 0 2300 1040 2329 10257 6785 6785 1 FDSNEEDSASVFSPSFGLKQTDKVPSK KSEDDSAKFDSNEEDS QTDKVPSKTVAAKKGK K F D S K T 1 0 1 3 0 1 2 1 0 0 1 3 0 3 2 6 1 0 0 2 0 27 2 2945.3931 Q02880-2;Q02880;B4DLV2 Q02880-2 1459 1485 TOP2B DNA topoisomerase 2-beta yes no 4 0.016969 30.916 By matching By matching By matching By matching By matching By MS/MS 1 18904000 0 0 0 0 0 18904000 2301 1035 2330 10258 6786 6786 1 FDYVAQQEQELDIKK EEVVVVAKFDYVAQQE EQELDIKKNERLWLLD K F D K K N 1 0 0 2 0 3 2 0 0 1 1 2 0 1 0 0 0 0 1 1 0 15 1 1852.9207 C9J0K5;C9K098;C9JVV5;C9J869;P16333 C9J0K5 11 25 NCK1 Cytoplasmic protein NCK1 yes no 3 1.4799E-05 78.529 By matching By MS/MS By matching By matching By matching By matching 1 1 6273700 0 4555200 0 1718600 0 0 2302 223 2331 10259;10260 6787 6787 0 FEDEDSDDVPRK PVDSVFNKFEDEDSDD DSDDVPRKRKLVPLDY K F E R K R 0 1 0 4 0 0 2 0 0 0 0 1 0 1 1 1 0 0 0 1 0 12 1 1450.6212 P49756 P49756 698 709 RBM25 RNA-binding protein 25 yes yes 3 1.1627E-26 119.03 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 1 1 1 10647000 719030 1105500 2089600 540040 1905100 4287200 2303 942 2332 10261;10262;10263;10264;10265;10266;10267;10268 6788;6789;6790;6791;6792 6789 4 FEDENFILK GKSIYGEKFEDENFIL EDENFILKHTGPGILS K F E L K H 0 0 1 1 0 0 2 0 0 1 1 1 0 2 0 0 0 0 0 0 0 9 0 1153.5655 P62937;Q567Q0;F8WE65;C9J5S7 P62937 83 91 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 2 3.8561E-282 191.45 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 13552000 0 0 0 13136000 0 415840 2304 999 2333 10269;10270;10271 6793;6794 6794 2 FEEAQSILKAPGTNVAMASNQAVR EAALFKCKFEEAQSIL MASNQAVRIVKEPTSH K F E V R I 5 1 2 0 0 2 2 1 0 1 1 1 1 1 1 2 1 0 0 2 0 24 1 2531.2802 P49792 P49792 1298 1321 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 3 0.0018743 57.046 By MS/MS By matching By matching By matching By matching By matching 1 12579000 12579000 0 0 0 0 0 2305 945 2334 10272 6795 6795 0 FEEFQNTLSK QLALYTEKFEEFQNTL EFQNTLSKSSEVFTTF K F E S K S 0 0 1 0 0 1 2 0 0 0 1 1 0 2 0 1 1 0 0 0 0 10 0 1241.5928 P40222 P40222 394 403 TXLNA Alpha-taxilin yes yes 2 3.5758E-15 121.36 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 14070000 0 1991600 1742700 1193400 5230200 3912600 2306 907 2335 10273;10274;10275;10276;10277 6796;6797;6798;6799 6797 4 FEEFQTTMAK QLSLYMDKFEEFQTTM EFQTTMAKSNELFTTF K F E A K S 1 0 0 0 0 1 2 0 0 0 0 1 1 2 0 0 2 0 0 0 0 10 0 1230.5591 Q9NUQ3;Q9NUQ3-2;Q9BZA4 Q9NUQ3 361 370 TXLNG;CYorf15B Gamma-taxilin;Putative gamma-taxilin-like protein CYorf15B yes no 2 0.019916 63.694 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 7462200 0 760920 0 0 1849100 4852200 2307 1546 2336 10278;10279;10280 6800;6801 6800 2 FEEMFASR DTAEAVPKFEEMFASR FEEMFASRFTENDKEY K F E S R F 1 1 0 0 0 0 2 0 0 0 0 0 1 2 0 1 0 0 0 0 0 8 0 1015.4433 Q9BTL3 Q9BTL3 11 18 FAM103A1 RNMT-activating mini protein yes yes 2 0.022624 77.732 By matching By matching By matching By matching By matching By MS/MS 1 1713300 0 0 0 0 0 1713300 2308 1448 2337 10281 6802 6802 1 FEKTEDGGEFEEGASENNAK EEPIDEKKFEKTEDGG GASENNAKESSPEKEA K F E A K E 2 0 2 1 0 0 6 3 0 0 0 2 0 2 0 1 1 0 0 0 0 20 1 2186.924 O43719;E9PFP2 O43719 431 450 HTATSF1 HIV Tat-specific factor 1 yes no 3 2.1252E-22 93.5 By MS/MS By matching By matching By matching By matching By MS/MS 2 1 1 1 1 8836600 1743600 977840 3205600 646110 0 2263300 2309 720 2338 10282;10283;10284;10285;10286;10287 6803;6804 6803 1 FEMEQNLR TLDDFRIKFEMEQNLR FEMEQNLRQGVDADIN K F E L R Q 0 1 1 0 0 1 2 0 0 0 1 0 1 1 0 0 0 0 0 0 0 8 0 1065.4913 P35527;CON__P35527 P35527 243 250 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.021358 78.77 By matching By MS/MS By matching By matching By matching By matching 1 1 1623600 0 1111800 0 0 511830 0 + 2310 899 2339 10288;10289 6805 6805 1 FEPPQSDSDGQRR KTKGRLSRFEPPQSDS SDSDGQRRSMDAPSRR R F E R R S 0 2 0 2 0 2 1 1 0 0 0 0 0 1 2 2 0 0 0 0 0 13 1 1517.6859 O15042-2;E7ET15;O15042;E7EW00;H0Y8D9 O15042-2 231 243 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 3 0.024843 40.015 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 6005300 860910 988860 0 0 1632200 2523300 2311 378 2340 10290;10291;10292;10293 6806;6807 6807 2 FEPVHFVASSSK SKFHARPRFEPVHFVA HFVASSSKDERQEDPY R F E S K D 1 0 0 0 0 0 1 0 1 0 0 1 0 2 1 3 0 0 0 2 0 12 0 1333.6667 O15226;G3V1N1 O15226 57 68 NKRF NF-kappa-B-repressing factor yes no 2 0.0071997 89.189 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 16047000 202540 1464500 1204800 1562500 5950300 5662800 2312 578 2341 10294;10295;10296;10297;10298;10299 6808 6808 1 FESPEVAER SKGCGVVKFESPEVAE ESPEVAERACRMMNGM K F E E R A 1 1 0 0 0 0 3 0 0 0 0 0 0 1 1 1 0 0 0 1 0 9 0 1062.4982 P52272-2;P52272;Q59ES8;F5H7Z1 P52272-2 660 668 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.0062516 95.775 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 11863000 1701700 1856800 1054000 630400 3650700 2969600 2313 956 2342 10300;10301;10302;10303;10304;10305;10306 6809;6810;6811;6812;6813;6814 6812 6 FFGTEDHAWIK GKKCFFVKFFGTEDHA TEDHAWIKVEQLKPYH K F F I K V 1 0 0 1 0 0 1 1 1 1 0 1 0 2 0 0 1 1 0 0 0 11 0 1349.6404 Q49A26-2;Q49A26;Q49A26-3;Q49A26-5 Q49A26-2 46 56 GLYR1 Putative oxidoreductase GLYR1 no no 2;3 2.0495E-153 161.67 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 185820000 27698000 13250000 19264000 21704000 69985000 33924000 2314 1168;1169 2343 10307;10308;10309;10310;10311;10312;10313 6815;6816;6817;6818;6819;6820;6821 6818 7 FFGVIPSGK ________________ FGVIPSGKKLVSETVK K F F G K K 0 0 0 0 0 0 0 2 0 1 0 1 0 2 1 1 0 0 0 1 0 9 0 950.52255 P35251-2;P35251;E0CX09;D6RAD2 P35251-2 6 14 RFC1 Replication factor C subunit 1 yes no 2 0.0071345 89.08 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 14572000 0 8332600 0 6239500 0 0 2315 896 2344 10314;10315 6822;6823 6822 2 FFRHECYLK FPCLECGKFFRHECYL FRHECYLKRHRLLHGT K F F L K R 0 1 0 0 1 0 1 0 1 0 1 1 0 2 0 0 0 0 1 0 0 9 1 1298.623 Q96SL8 Q96SL8 450 458 FIZ1 Flt3-interacting zinc finger protein 1 yes yes 3 0.017233 72.23 By matching By matching By matching By MS/MS By matching By matching 1 1 1 3041600 0 0 0 652660 650020 1739000 2316 1419 2345 10316;10317;10318 6824 6824 1 FFRNGDTASPK VRGYPTIKFFRNGDTA NGDTASPKEYTAEAID K F F P K E 1 1 1 1 0 0 0 1 0 0 0 1 0 2 1 1 1 0 0 0 0 11 1 1238.6044 I3L2P8;F5H8J2;H7BZ94;E7EPA8;P07237;I3L3P5;I3NI03;I3L3U6 I3L2P8 104 114 P4HB Protein disulfide-isomerase yes no 3 0.01381 60.691 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2366500 0 585790 391710 288090 0 1100900 2317 356 2346 10319;10320;10321;10322 6825 6825 1 FFRVLNGYSLQHK RLKNNQSKFFRVLNGY NGYSLQHKLLLTGTPL K F F H K L 0 1 1 0 0 1 0 1 1 0 2 1 0 2 0 1 0 0 1 1 0 13 1 1607.8572 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 859 871 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3;4 0 202.18 By matching By matching By matching By matching By matching By MS/MS 2 143830000 0 0 0 0 0 143830000 2318 486 2347 10323;10324 6826;6827 6826 2 FFTEASEAK KSFPSIFKFFTEASEA FTEASEAKTSSLKPAV K F F A K T 2 0 0 0 0 0 2 0 0 0 0 1 0 2 0 1 1 0 0 0 0 9 0 1028.4815 Q8WUF8-3;Q8WUF8;B4DMI0;Q8WUF8-4 Q8WUF8-3 342 350 FAM172A Protein FAM172A yes no 2 0.015286 76.17 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 3609600 0 528090 783940 237580 644490 1415500 2319 1341 2348 10325;10326;10327;10328;10329 6828 6828 1 FFTQPEK KDPVLPMKFFTQPEKD KFFTQPEKDFCNDKSY K F F E K D 0 0 0 0 0 1 1 0 0 0 0 1 0 2 1 0 1 0 0 0 0 7 0 895.44397 Q29RF7 Q29RF7 1107 1113 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 0.00024061 117.93 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 43482000 5438500 0 8027000 4612000 11672000 13733000 2320 1159 2349 10330;10331;10332;10333;10334 6829;6830;6831 6831 3 FFTTPSK TPKKPEAKFFTTPSKS KFFTTPSKSVRKASHT K F F S K S 0 0 0 0 0 0 0 0 0 0 0 1 0 2 1 1 2 0 0 0 0 7 0 826.4225 O76021;B4DJ58 O76021 462 468 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2 0.0067714 101.28 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 20266000 3724800 1969500 1868300 2990800 6586300 3126000 2321 753 2350 10335;10336;10337;10338;10339;10340 6832;6833;6834;6835;6836 6833 4 FGDLTDNFSSPHAR VSRLVLGKFGDLTDNF NFSSPHARRKVLAGVV K F G A R R 1 1 1 2 0 0 0 1 1 0 1 0 0 2 1 2 1 0 0 0 0 14 0 1562.7114 P78563-2;P78563-3;P78563-4;G5E9B4;P78563;F5H398 P78563-2 335 348 ADARB1 Double-stranded RNA-specific editase 1 yes no 3 0.030705 39.961 By matching By matching By matching By matching By matching By MS/MS 1 1 2611600 0 781650 0 0 0 1829900 2322 593 2351 10341;10342 6837 6837 1 FGDPVVQSDMK AKRLIGRKFGDPVVQS PVVQSDMKHWPFQVIN K F G M K H 0 0 0 2 0 1 0 1 0 0 0 1 1 1 1 1 0 0 0 2 0 11 0 1221.57 P08107;H0YG33 P08107 78 88 HSPA1A Heat shock 70 kDa protein 1A/1B yes no 2 0.0065944 69.846 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2 1 17370000 1466200 2260700 1627900 1395800 4039800 6579200 2323 619 2352 10343;10344;10345;10346;10347;10348;10349 6838;6839;6840;6841 6841 4 FGERALK LRCASIQKFGERALKA KFGERALKAWSVARLS K F G L K A 1 1 0 0 0 0 1 1 0 0 1 1 0 1 0 0 0 0 0 0 0 7 1 819.46029 CON__P02769 CON__P02769 229 235 yes yes 2 0.031082 101.6 By matching By MS/MS By matching By matching By matching By matching 1 1 2408000 0 2273100 0 0 134910 0 + 2324 294 2353 10350;10351 6842 6842 1 FGEVVDCTLK DLKDYFSKFGEVVDCT EVVDCTLKLDPITGRS K F G L K L 0 0 0 1 1 0 1 1 0 0 1 1 0 1 0 0 1 0 0 2 0 10 0 1166.5642 D6RF44;H0YA96;D6RAF8;H0Y8G5;H7BXN2;Q14103-4;B4DTC3;Q14103-3;Q14103-2;Q14103;D6RD83;D6RBQ9 D6RF44 22 31 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2 0.0016888 103.31 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 45073000 8525600 7406900 1983500 3974800 12573000 10610000 2325 126 2354 10352;10353;10354;10355;10356;10357;10358;10359;10360;10361 6843;6844;6845;6846;6847;6848;6849;6850;6851;6852;6853 6847 11 FGFAESIANQR KVRKEGGKFGFAESIA AESIANQRITAFKMEK K F G Q R I 2 1 1 0 0 1 1 1 0 1 0 0 0 2 0 1 0 0 0 0 0 11 0 1238.6044 Q06265-3;Q06265-4;D6RIY6;Q06265;Q06265-2 Q06265-3 198 208 EXOSC9 Exosome complex component RRP45 yes no 2 1.1443E-55 141.91 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 64464000 0 17794000 0 4194100 0 42475000 2326 330 2355 10362;10363;10364 6854;6855;6856 6855 3 FGGLQNKAPPMDKLR DRIRSNGKFGGLQNKA APPMDKLRGMVFGAPV K F G L R G 1 1 1 1 0 1 0 2 0 0 2 2 1 1 2 0 0 0 0 0 0 15 2 1670.8926 A6NHR9;A6NHR9-2 A6NHR9 1873 1887 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes no 4 0.015689 43.69 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 5753300 664570 944130 897150 0 399980 2847400 2327 23 2356 10365;10366;10367;10368;10369 6857 6857 1 FGGNPGGFGNQGGFGNSR RQLERSGRFGGNPGGF QGGFGNSRGGGAGLGN R F G S R G 0 1 3 0 0 1 0 8 0 0 0 0 0 3 1 1 0 0 0 0 0 18 0 1725.7608 Q13148;Q13148-2;B4DJ45 Q13148 276 293 TARDBP TAR DNA-binding protein 43 yes no 2 1.6414E-32 110.77 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 16376000 3419500 1648600 3232300 986620 1521400 5567400 2328 1073 2357 10370;10371;10372;10373;10374;10375 6858;6859;6860;6861;6862 6859 5 FGGSRAGPLSGK DRGFGAPRFGGSRAGP RAGPLSGKKFGNPGEK R F G G K K 1 1 0 0 0 0 0 4 0 0 1 1 0 1 1 2 0 0 0 0 0 12 1 1132.5989 P17844;E7ETL9 P17844 21 32 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 2 0.037527 55.291 By MS/MS By matching By matching By matching By matching By matching 1 2162800 2162800 0 0 0 0 0 2329 853 2358 10376 6863 6863 1 FGHGRFQTMEEK KFIDTTSKFGHGRFQT RFQTMEEKKAFMGPLK K F G E K K 0 1 0 0 0 1 2 2 1 0 0 1 1 2 0 0 1 0 0 0 0 12 1 1465.6772 P39023;G5E9G0 P39023 374 385 RPL3 60S ribosomal protein L3 yes no 3 0.0027593 73.499 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 13922000 0 987140 3045000 5757600 0 4131800 2330 905 2359 10377;10378;10379;10380 6864;6865;6866 6865 3 FGISEPGNQEK PVSADGFKFGISEPGN SEPGNQEKKSEKPLEN K F G E K K 0 0 1 0 0 1 2 2 0 1 0 1 0 1 1 1 0 0 0 0 0 11 0 1204.5724 P49792;E9PGT0;P0DJD0;P0DJD1;F8VYC4;Q99666;O14715;Q7Z3J3;B4DZH4 P49792 1900 1910 RANBP2;RGPD1;RGPD2;RGPD5;RGPD8;RGPD4 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RanBP2-like and GRIP domain-containing protein 4 no no 2 8.6933E-13 115.29 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 23495000 3219700 4765200 2792100 1640600 4568400 6509000 2331 945;1251 2360 10381;10382;10383;10384;10385;10386;10387 6867;6868;6869;6870;6871;6872;6873 6870 7 FGIVTSSAGTGTTEDTEAK KLKKRKERFGIVTSSA TTEDTEAKKRKRAERF R F G A K K 2 0 0 1 0 0 2 3 0 1 0 1 0 1 0 2 5 0 0 1 0 19 0 1870.8796 P82979;H0YHG0 P82979 181 199 SARNP SAP domain-containing ribonucleoprotein yes no 2 0.0021518 51.798 By matching By matching By matching By matching By MS/MS By matching 1 1042800 0 0 0 0 1042800 0 2332 621 2361 10388 6874 6874 1 FGLESHAHTIQICK DARKCLGRFGLESHAH AHTIQICKLSGGQKAR R F G C K L 1 0 0 0 1 1 1 1 2 2 1 1 0 1 0 1 1 0 0 0 0 14 0 1639.8141 Q8NE71;Q8NE71-2;H0YGW7;Q5STZ7 Q8NE71 729 742 ABCF1 ATP-binding cassette sub-family F member 1 yes no 3 5.8517E-31 118.76 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 3982600 877590 0 0 0 680620 2424400 2333 1321 2362 10389;10390;10391 6875;6876;6877 6875 3 FGNTEQGFK NFSEKASKFGNTEQGF GNTEQGFKFGHVDQEN K F G F K F 0 0 1 0 0 1 1 2 0 0 0 1 0 2 0 0 1 0 0 0 0 9 0 1026.4771 P49792 P49792 1852 1860 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 2 1.9031E-06 113.66 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 34282000 4199800 5788200 4168800 2145300 7405800 10574000 2334 945 2363 10392;10393;10394;10395;10396;10397 6878;6879;6880;6881;6882 6881 5 FGNVYLAR GRPLGKGKFGNVYLAR FGNVYLAREKQSKFIL K F G A R E 1 1 1 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 1 1 0 8 0 938.4974 O14965;A3KFJ0;Q5QPD4;A3KFJ1;Q9UQB9-2;Q9UQB9-3;Q9UQB9;B4DNM4;C7G535;Q96GD4 O14965 144 151 AURKA;AURKC;AURKB Aurora kinase A;Aurora kinase C;Aurora kinase B no no 2 1.0093E-15 127.12 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 2 1 118720000 3519000 19782000 19166000 8297300 14594000 53362000 2335 698;111 2364 10398;10399;10400;10401;10402;10403;10404;10405 6883;6884;6885;6886;6887 6886 5 FGQGAHHAAGQAGNEAGR QVGKEAEKFGQGAHHA QAGNEAGRFGQGVHHG K F G G R F 5 1 1 0 0 2 1 5 2 0 0 0 0 1 0 0 0 0 0 0 0 18 0 1734.7935 E9PBV3 E9PBV3 242 259 SBSN Suprabasin yes no 4 0.031711 34.382 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 2408600 0 345960 811240 0 899460 351950 2336 409 2365 10406;10407;10408;10409 6888 6888 1 FGQGDLPKPINSDFR FVHQASFKFGQGDLPK KPINSDFRSVFSTKEG K F G F R S 0 1 1 2 0 1 0 2 0 1 1 1 0 2 2 1 0 0 0 0 0 15 1 1689.8475 P49792 P49792 1459 1473 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 3 0.0073455 82.483 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 13378000 0 0 0 0 0 13378000 2337 945 2366 10410;10411 6889;6890 6889 2 FGQGGAGPVGGQGPR GSDMRTERFGQGGAGP PVGGQGPRGMGPGTPA R F G P R G 1 1 0 0 0 2 0 7 0 0 0 0 0 1 2 0 0 0 0 1 0 15 0 1340.6585 P23246 P23246 667 681 SFPQ Splicing factor, proline- and glutamine-rich yes yes 2 0.0024265 61.409 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 47480000 6594100 9938700 6978000 5716900 10107000 8145000 2338 865 2367 10412;10413;10414;10415;10416;10417 6891;6892;6893;6894;6895;6896 6896 6 FGQGVDNAAGQAGNEAGR QAGSEAGKFGQGVDNA QAGNEAGRFGQGVHHA K F G G R F 4 1 2 1 0 2 1 5 0 0 0 0 0 1 0 0 0 0 0 1 0 18 0 1717.7768 E9PBV3 E9PBV3 152 169 SBSN Suprabasin yes yes 2 0.017465 48.376 By matching By matching By matching By matching By MS/MS By matching 1 1 838580 0 0 0 158910 679670 0 2339 409 2368 10418;10419 6897 6897 0 FGTEELFK QELDDILKFGTEELFK FGTEELFKDEATDGGG K F G F K D 0 0 0 0 0 0 2 1 0 0 1 1 0 2 0 0 1 0 0 0 0 8 0 969.48075 F5H2G1;F5GWX5;Q14839;Q14839-2;Q12873;E9PG89;Q12873-2 F5H2G1 1195 1202 CHD4;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 no no 2 1.4398E-25 136.27 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 258140000 0 0 35118000 3584400 9657000 209780000 2340 486;430 2369 10420;10421;10422;10423;10424 6898;6899;6900;6901;6902 6900 5 FGTEELFKDEATDGGGDNK QELDDILKFGTEELFK TDGGGDNKEGEDSSVI K F G N K E 1 0 1 3 0 0 3 4 0 0 1 2 0 2 0 0 2 0 0 0 0 19 1 2028.8912 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1195 1213 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 3.6912E-17 97.095 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 24194000 0 9926100 0 0 0 14268000 2341 486 2370 10425;10426 6903;6904;6905 6903 3 FGTEELFKDENEGENKEEDSSVIHYDNEAIAR QELDDILKFGTEELFK YDNEAIARLLDRNQDA K F G A R L 2 1 3 3 0 0 8 2 1 2 1 2 0 2 0 2 1 0 1 1 0 32 2 3713.6605 Q12873;E9PG89;Q12873-2 Q12873 1231 1262 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 4 7.2049E-18 63.932 By matching By matching By matching By matching By matching By MS/MS 1 6788000 0 0 0 0 0 6788000 2342 430 2371 10427 6906 6906 1 FGTFGGLGSK KGKHGKLKFGTFGGLG TFGGLGSKSKGHYEVT K F G S K S 0 0 0 0 0 0 0 4 0 0 1 1 0 2 0 1 1 0 0 0 0 10 0 969.49198 Q09666 Q09666 5822 5831 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.004291 88.056 By matching By matching By matching By matching By matching By MS/MS 1 1717000 0 0 0 0 0 1717000 2343 1054 2372 10428 6907;6908 6907 2 FGTSETSKAPK VPAPASFKFGTSETSK SETSKAPKSGFEGMFT K F G P K S 1 0 0 0 0 0 1 1 0 0 0 2 0 1 1 2 2 0 0 0 0 11 1 1151.5823 P49792 P49792 1586 1596 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 2 2.0707E-07 108.98 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 9267900 1786500 0 3091800 785550 1404300 2199700 2344 945 2373 10429;10430;10431;10432;10433;10434 6909;6910;6911;6912 6910 4 FGVEQDRMDK ASHGYGGKFGVEQDRM VEQDRMDKSAVGHEYQ K F G D K S 0 1 0 2 0 1 1 1 0 0 0 1 1 1 0 0 0 0 0 1 0 10 1 1223.5605 Q14247;Q14247-3;Q14247-2;H7C314 Q14247 88 97 CTTN Src substrate cortactin yes no 3 0.008731 81.525 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 10762000 1081400 1691100 2399800 1090700 1518900 2979600 2345 1104 2374 10435;10436;10437;10438;10439;10440 6913;6914;6915;6916 6916 4 FGVQSERQDSAAVGFDYKEK YKTGFGGKFGVQSERQ VGFDYKEKLAKHESQQ K F G E K L 2 1 0 2 0 2 2 2 0 0 0 2 0 2 0 2 0 0 1 2 0 20 2 2260.076 Q14247 Q14247 273 292 CTTN Src substrate cortactin yes yes 3 0.0039179 58.848 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 2346 1104 2375 10441 6917 6917 1 FGVSSESKPEEVKK SKPIGDFKFGVSSESK SKPEEVKKDSKNDNFK K F G K K D 0 0 0 0 0 0 3 1 0 0 0 3 0 1 1 3 0 0 0 2 0 14 2 1549.7988 P49790;F6QR24;Q4LE47 P49790 961 974 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 3 4.6798E-12 101.38 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 31674000 5600200 10979000 5913400 0 9181000 0 2347 531 2376 10442;10443;10444;10445 6918;6919 6918 2 FHCPHCDTVIARK KHTENVAKFHCPHCDT CDTVIARKSDLGVHLR K F H R K S 1 1 0 1 2 0 0 0 2 1 0 1 0 1 1 0 1 0 0 1 0 13 1 1639.7711 P49711;B5MC38 P49711 437 449 CTCF Transcriptional repressor CTCF yes no 4 0.036068 36.954 By matching By matching By matching By matching By MS/MS By matching 1 1 2621200 0 0 0 0 1492800 1128400 2348 940 2377 10446;10447 6920 6920 1 FHEAQLSEK MQQELQRKFHEAQLSE HEAQLSEKISLQAIQQ K F H E K I 1 0 0 0 0 1 2 0 1 0 1 1 0 1 0 1 0 0 0 0 0 9 0 1087.5298 E9PF10;O75694-2;B4DLT2;O75694 E9PF10 767 775 NUP155 Nuclear pore complex protein Nup155 yes no 2 0.0067401 96.342 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 5265600 699560 2313300 1855400 397380 0 0 2349 100 2378 10448;10449;10450;10451 6921;6922 6921 2 FHPIQGHRVEVK ADKAAVVKFHPIQGHR QGHRVEVKKAVPKEDI K F H V K K 0 1 0 0 0 1 1 1 2 1 0 1 0 1 1 0 0 0 0 2 0 12 1 1445.7892 Q13151 Q13151 160 171 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 3 0.0018591 82.494 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 16200000 0 729680 0 4816400 8850400 1803700 2350 1074 2379 10452;10453;10454;10455 6923;6924;6925 6924 3 FHPIQGHRVEVKK ADKAAVVKFHPIQGHR GHRVEVKKAVPKEDIY K F H K K A 0 1 0 0 0 1 1 1 2 1 0 2 0 1 1 0 0 0 0 2 0 13 2 1573.8841 Q13151 Q13151 160 172 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 3 0.024259 57.885 By matching By matching By matching By matching By MS/MS By matching 1 1 2565500 0 0 0 0 2064600 500890 2351 1074 2380 10456;10457 6926 6926 1 FIADGCKEALLEEK SRQSEIQKFIADGCKE KEALLEEKRRFCFLVD K F I E K R 2 0 0 1 1 0 3 1 0 1 2 2 0 1 0 0 0 0 0 0 0 14 1 1621.8022 Q9UHR4 Q9UHR4 177 190 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 3 0.03287 40.88 By matching By matching By matching By MS/MS By matching By matching 1 1 4710300 3813300 0 0 897030 0 0 2352 1595 2381 10458;10459 6927 6927 1 FIASTGMDR VAFGHHAKFIASTGMD IASTGMDRSLKFYSL_ K F I D R S 1 1 0 1 0 0 0 1 0 1 0 0 1 1 0 1 1 0 0 0 0 9 0 996.46987 Q9UMS4;H0YGZ5 Q9UMS4 489 497 PRPF19 Pre-mRNA-processing factor 19 yes no 2 0.0060651 93.649 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 27689000 2140200 2773800 1873200 2633700 8653700 9614000 2353 1613 2382 10460;10461;10462;10463;10464;10465 6928;6929;6930;6931 6929 4 FICTTSAIQNR TGKELLYKFICTTSAI TTSAIQNRFKYARVTP K F I N R F 1 1 1 0 1 1 0 0 0 2 0 0 0 1 0 1 2 0 0 0 0 11 0 1309.6449 B4E3P0;P53396-2;P53396;E7ENH9 B4E3P0 18 28 ACLY ATP-citrate synthase yes no 2 5.2361E-08 110.39 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 3041200 0 513630 0 0 0 2527500 2354 168 2383 10466;10467 6932;6933 6932 2 FICTTSAIQNRFK TGKELLYKFICTTSAI SAIQNRFKYARVTPDT K F I F K Y 1 1 1 0 1 1 0 0 0 2 0 1 0 2 0 1 2 0 0 0 0 13 1 1584.8082 B4E3P0;P53396-2;P53396;E7ENH9 B4E3P0 18 30 ACLY ATP-citrate synthase yes no 3 0.0043885 62.338 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 6574800 0 0 0 1980600 0 4594200 2355 168 2384 10468;10469 6934;6935 6934 2 FIEIAAR RAPQCLGKFIEIAARK KFIEIAARKKRNFILD K F I A R K 2 1 0 0 0 0 1 0 0 2 0 0 0 1 0 0 0 0 0 0 0 7 0 818.46504 Q00839;B3KX72;Q00839-2 Q00839 566 572 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 2 0.010406 110.61 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 65952000 7099800 6873100 7937400 0 19565000 24477000 2356 1022;1023 2385 10470;10471;10472;10473;10474 6936;6937;6938;6939;6940 6940 5 FINDQYEK NCWQPIMKFINDQYEK FINDQYEKYLQEEVNI K F I E K Y 0 0 1 1 0 1 1 0 0 1 0 1 0 1 0 0 0 0 1 0 0 8 0 1055.4924 Q9UHD8-3;Q9UHD8-7;Q9UHD8-2;Q9UHD8-5;Q9UHD8;F5GWR9;Q9UHD8-4;Q9UHD8-9;Q9UHD8-8 Q9UHD8-3 218 225 SEPT9 Septin-9 yes no 2 0.034536 69.825 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 4665300 417850 751960 0 0 1596300 1899200 2357 1593 2386 10475;10476;10477;10478 6941 6941 1 FINHCCTPNCYAK TKCGNLARFINHCCTP CTPNCYAKVITIESQK R F I A K V 1 0 2 0 3 0 0 0 1 1 0 1 0 1 1 0 1 0 1 0 0 13 0 1683.6956 O15047 O15047 1644 1656 SETD1A Histone-lysine N-methyltransferase SETD1A yes yes 3 0.0018602 67.252 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 6186600 599790 988470 682930 0 1141500 2773900 2358 703 2387 10479;10480;10481;10482;10483 6942;6943;6944;6945 6944 4 FINYVKNCFR SLPKVEAKFINYVKNC NYVKNCFRMTDQEAIQ K F I F R M 0 1 2 0 1 0 0 0 0 1 0 1 0 2 0 0 0 0 1 1 0 10 1 1359.6758 P06748-2;P06748 P06748-2 239 248 NPM1 Nucleophosmin yes no 2;3 0.00024739 106.68 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 2 1 116120000 63423000 4603500 17115000 3815400 18443000 8718400 2359 801 2388 10484;10485;10486;10487;10488;10489;10490;10491 6946;6947;6948;6949;6950;6951 6950 6 FIQTFGK GLGAFRRKFIQTFGKE KFIQTFGKEFDKHFGK K F I G K E 0 0 0 0 0 1 0 1 0 1 0 1 0 2 0 0 1 0 0 0 0 7 0 839.45414 P78527;E7EUY0;P78527-2 P78527 3632 3638 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.00054892 116.54 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 76689000 0 6708500 4769300 3662800 17610000 43939000 2360 1012 2389 10492;10493;10494;10495;10496 6952;6953;6954;6955 6954 4 FIQTFGKEFDK GLGAFRRKFIQTFGKE TFGKEFDKHFGKGGSK K F I D K H 0 0 0 1 0 1 1 1 0 1 0 2 0 3 0 0 1 0 0 0 0 11 1 1358.6871 P78527;E7EUY0;P78527-2 P78527 3632 3642 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2;3 2.9802E-41 132.03 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 2 1 2 45845000 7639000 4183100 7234800 3353100 8071100 15364000 2361 1012 2390 10497;10498;10499;10500;10501;10502;10503;10504;10505 6956;6957;6958;6959;6960;6961 6959 6 FIQTFGKEFDKHFGK GLGAFRRKFIQTFGKE EFDKHFGKGGSKLLRM K F I G K G 0 0 0 1 0 1 1 2 1 1 0 3 0 4 0 0 1 0 0 0 0 15 2 1827.9308 P78527;E7EUY0;P78527-2 P78527 3632 3646 PRKDC DNA-dependent protein kinase catalytic subunit yes no 4 0.00024893 86.262 By matching By matching By matching By MS/MS By matching By matching 1 3016500 0 0 0 3016500 0 0 2362 1012 2391 10506 6962 6962 1 FIRVQNEGTGK HNLSLHTRFIRVQNEG VQNEGTGKSSWWMLNP R F I G K S 0 1 1 0 0 1 1 2 0 1 0 1 0 1 0 0 1 0 0 1 0 11 1 1247.6622 A8MYZ6;A6NCE0;Q12778 A8MYZ6 151 161 FOXO6;FOXO1 Forkhead box protein O6;Forkhead box protein O1 yes no 3 0.0068574 69.65 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 7421700 782940 1192000 1871800 736760 1052600 1785600 2363 14 2392 10507;10508;10509;10510;10511;10512 6963;6964;6965 6964 3 FIVCLNK HQNTMEDKFIVCLNKV KFIVCLNKVTKSFPPL K F I N K V 0 0 1 0 1 0 0 0 0 1 1 1 0 1 0 0 0 0 0 1 0 7 0 892.48406 P78527;E7EUY0;P78527-2 P78527 2360 2366 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.040671 81.381 By matching By matching By matching By matching By matching By MS/MS 1 1 6398800 0 1651200 0 0 0 4747600 2364 1012 2393 10513;10514 6966 6966 1 FKDLGEEHFK HKSEIAHRFKDLGEEH DLGEEHFKGLVLIAFS R F K F K G 0 0 0 1 0 0 2 1 1 0 1 2 0 2 0 0 0 0 0 0 0 10 1 1248.6139 CON__P02769 CON__P02769 35 44 yes yes 3 2.5331E-06 112.83 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 40090000 2288700 7613900 3108400 2593400 9438600 15047000 + 2365 294 2394 10515;10516;10517;10518;10519;10520 6967;6968;6969;6970;6971 6971 5 FKEDLLNNGQPR QDLERKLRFKEDLLNN LLNNGQPRLTYEERMA R F K P R L 0 1 2 1 0 1 1 1 0 0 2 1 0 1 1 0 0 0 0 0 0 12 1 1429.7314 Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-5;Q8WX93-4;Q8WX93-2;Q8WX93-9 Q8WX93-3 532 543 PALLD Palladin yes no 3 0.0068234 62.528 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5299600 0 904730 883790 0 1371500 2139500 2366 1343 2395 10521;10522;10523;10524 6972 6972 1 FKLITEDVQGK NDEVAFRKFKLITEDV ITEDVQGKNCLTNFHG K F K G K N 0 0 0 1 0 1 1 1 0 1 1 2 0 1 0 0 1 0 0 1 0 11 1 1276.7027 D6RAT0;P61247;D6RG13;D6RB09;F5H4F9;E9PFI5;D6RED7;D6RAS7;H0Y8L7;D6RGE0 D6RAT0 47 57 RPS3A 40S ribosomal protein S3a yes no 3 0.003673 81.625 By matching By matching By matching By MS/MS By matching By matching 1 1 17263000 0 0 0 2792500 14470000 0 2367 321 2396 10525;10526 6973 6973 1 FKLQDVADSFKK KVEHLAVRFKLQDVAD DVADSFKKIFDEAKTA R F K K K I 1 0 0 2 0 1 0 0 0 0 1 3 0 2 0 1 0 0 0 1 0 12 2 1424.7664 P49792;E9PGT0;P0DJD0;P0DJD1;F8VYC4;Q99666;O14715;E7ES93;B4DTM4;Q7Z3J3 P49792 2423 2434 RANBP2;RGPD1;RGPD2;RGPD5;RGPD8;RGPD4 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RanBP2-like and GRIP domain-containing protein 4 no no 3 0.0022992 84.352 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2850300 0 0 0 0 2850300 0 2368 945;1251 2397 10527;10528 6974;6975 6974 2 FLALQGDMEQALENYDICTEMLQSSTAIQVEAGAERR RVYWLKARFLALQGDM VEAGAERRDIVIRLPN R F L R R D 5 2 1 2 1 4 5 2 0 2 4 0 2 1 0 2 2 0 1 1 0 37 1 4186.9609 G5E9F3;Q9Y6J0 G5E9F3 574 610 CABIN1 Calcineurin-binding protein cabin-1 yes no 6 0.029193 8.9121 By matching By matching By matching By MS/MS By matching By matching 1 11591000 0 0 0 11591000 0 0 2369 595 2398 10529 6976 6976 1 FLDQNLQK SENCNKNKFLDQNLQK FLDQNLQKYQAECSQF K F L Q K Y 0 0 1 1 0 2 0 0 0 0 2 1 0 1 0 0 0 0 0 0 0 8 0 1004.5291 P15924;P15924-2;H7BYR0 P15924 1057 1064 DSP Desmoplakin yes no 2 0.0088122 93.162 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 4705400 0 1032000 811250 442330 612250 1807500 2370 840 2399 10530;10531;10532;10533;10534 6977;6978 6977 2 FLEELGEGK DQEQRILKFLEELGEG LEELGEGKATTAHDLS K F L G K A 0 0 0 0 0 0 3 2 0 0 2 1 0 1 0 0 0 0 0 0 0 9 0 1020.5128 P55265;P55265-4;E7ENU4;H0YCK3;P55265-2;P55265-3 P55265 146 154 ADAR Double-stranded RNA-specific adenosine deaminase no no 2 0.0071345 89.08 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 2648000 0 846520 249890 0 359190 1192400 2371 352;968 2400 10535;10536;10537;10538 6979 6979 1 FLEHLSGAGK APKGSLRKFLEHLSGA EHLSGAGKAIGVLTSG K F L G K A 1 0 0 0 0 0 1 2 1 0 2 1 0 1 0 1 0 0 0 0 0 10 0 1057.5556 Q01813 Q01813 16 25 PFKP 6-phosphofructokinase type C yes yes 2 3.041E-09 117.02 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 8667900 706180 879470 1752700 1087200 2344900 1897400 2372 1031 2401 10539;10540;10541;10542;10543;10544 6980;6981;6982;6983;6984 6982 5 FLEKYPSAEVAR MAIPVLWKFLEKYPSA YPSAEVARTADWRDVS K F L A R T 2 1 0 0 0 0 2 0 0 0 1 1 0 1 1 1 0 0 1 1 0 12 1 1408.7351 O95243-2 O95243-2 475 486 MBD4 Methyl-CpG-binding domain protein 4 no no 3 0.0055191 63.966 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6980800 836830 0 620080 0 1823700 3700200 2373 769 2402 10545;10546;10547;10548 6985 6985 1 FLENVAAAETEKQVALAQGR ERSIYKARFLENVAAA QVALAQGRAETLAGAM R F L G R A 5 1 1 0 0 2 3 1 0 0 2 1 0 1 0 0 1 0 0 2 0 20 1 2144.1226 Q9Y613 Q9Y613 443 462 FHOD1 FH1/FH2 domain-containing protein 1 yes yes 3 0.025444 55.031 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 2374 1659 2403 10549 6986 6986 1 FLEQQNQVLQTK ASFIDKVRFLEQQNQV QNQVLQTKWELLQQMN R F L T K W 0 0 1 0 0 4 1 0 0 0 2 1 0 1 0 0 1 0 0 1 0 12 0 1474.778 P35908;CON__P35908;CON__Q6NXH9;CON__Q6IFZ6;Q7Z794;CON__Q7Z794;P04264;CON__P04264 P35908 198 209 KRT2;KRT77;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 1 no no 2 3.0104E-223 180.61 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 45300000 2903700 19200000 5118000 3991900 2621800 11464000 + 2375 302;789 2404 10550;10551;10552;10553;10554;10555 6987;6988;6989;6990;6991;6992;6993 6990 7 FLESLPEEEQQRVLGEEK DYEVELLRFLESLPEE QRVLGEEKMLNINKKQ R F L E K M 0 1 0 0 0 2 6 1 0 0 3 1 0 1 1 1 0 0 0 1 0 18 1 2159.0746 E9PKP7;P17480-2;P17480 E9PKP7 324 341 UBTF Nucleolar transcription factor 1 yes no 3 0.00081364 69.379 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 173920000 14297000 0 0 0 159630000 0 2376 455 2405 10556;10557 6994;6995 6994 1 FLESTDSFNNELK RHQEKKRKFLESTDSF DSFNNELKRLCGLKVE K F L L K R 0 0 2 1 0 0 2 0 0 0 2 1 0 2 0 2 1 0 0 0 0 13 0 1542.7202 C0IMW5;B4DFR4;Q969G3-2;B4DGM3;Q969G3;H7C048;H7BXG8;H7C3F6 C0IMW5 224 236 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes no 2 2.3496E-131 157.33 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 67628000 0 15593000 14890000 0 5656700 31489000 2377 85 2406 10558;10559;10560;10561 6996;6997;6998;6999 6997 3 FLESYATDNEK DDDPEYRKFLESYATD SYATDNEKMTSTPETL K F L E K M 1 0 1 1 0 0 2 0 0 0 1 1 0 1 0 1 1 0 1 0 0 11 0 1315.5932 Q0VAK7;Q9BZI7-2;Q9BZI7 Q0VAK7 163 173 UPF3B Regulator of nonsense transcripts 3B yes no 2 9.2367E-08 108.35 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 1 1 18857000 4133900 2062900 2591100 2126300 2857600 5085700 2378 1055 2407 10562;10563;10564;10565;10566;10567;10568 7000;7001;7002;7003;7004;7005;7006;7007;7008 7008 9 FLHSSIFEQDSK RQELFASRFLHSSIFE SIFEQDSKRLQHLERK R F L S K R 0 0 0 1 0 1 1 0 1 1 1 1 0 2 0 3 0 0 0 0 0 12 0 1436.6936 Q96T58 Q96T58 1530 1541 SPEN Msx2-interacting protein yes yes 3 0.0091413 58.172 By matching By matching By matching By matching By MS/MS By matching 1 1 2059000 0 647480 0 0 1411600 0 2379 1422 2408 10569;10570 7009 7009 1 FLIDKNGCVVK AIKWNFTKFLIDKNGC DKNGCVVKRYGPMEEP K F L V K R 0 0 1 1 1 0 0 1 0 1 1 2 0 1 0 0 0 0 0 2 0 11 1 1291.6958 P36969-2;P36969 P36969-2 141 151 GPX4 Phospholipid hydroperoxide glutathione peroxidase, mitochondrial yes no 2;3 5.0456E-08 111.86 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 2 2 1 3 35723000 11457000 0 4331800 9049200 5584300 5300700 2380 902 2409 10571;10572;10573;10574;10575;10576;10577;10578;10579;10580 7010;7011;7012;7013;7014;7015;7016 7010 7 FLKSTEEQELEK CMPPAKQKFLKSTEEQ TEEQELEKSMKMQQEV K F L E K S 0 0 0 0 0 1 4 0 0 0 2 2 0 1 0 1 1 0 0 0 0 12 1 1479.7457 Q9ULW0;Q96RR5 Q9ULW0 206 217 TPX2;HCA90 Targeting protein for Xklp2 yes no 3 4.131E-80 148.13 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 10354000 4161900 0 4284400 1908100 0 0 2381 1611 2410 10581;10582;10583 7017;7018;7019;7020 7020 4 FLQVHASSGHK LLLENRSKFLQVHASS VHASSGHKYSLKEALC K F L H K Y 1 0 0 0 0 1 0 1 2 0 1 1 0 1 0 2 0 0 0 1 0 11 0 1209.6255 Q9BRX2 Q9BRX2 240 250 PELO Protein pelota homolog yes yes 2;3 0.010215 64.64 By matching By matching By MS/MS By matching By matching By matching 2 4996100 0 0 4996100 0 0 0 2382 1443 2411 10584;10585 7021;7022 7022 2 FLQVHASSGHKYSLK LLLENRSKFLQVHASS SGHKYSLKEALCDPTV K F L L K E 1 0 0 0 0 1 0 1 2 0 2 2 0 1 0 3 0 0 1 1 0 15 1 1700.8998 Q9BRX2 Q9BRX2 240 254 PELO Protein pelota homolog yes yes 4 0.023023 41.621 By MS/MS By matching By matching By matching By matching By matching 1 1577600 1577600 0 0 0 0 0 2383 1443 2412 10586 7023 7023 1 FLRPSDDEELSFHSK SFGNLRAKFLRPSDDE EELSFHSKGRKFEPLS K F L S K G 0 1 0 2 0 0 2 0 1 0 2 1 0 2 1 3 0 0 0 0 0 15 1 1805.8584 Q2TBE0-3;Q2TBE0-2;Q2TBE0;H0YE03;H7C3G7 Q2TBE0-3 368 382 CWF19L2 CWF19-like protein 2 yes no 3;4 1.326E-70 135.14 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 2 11367000 0 1980900 4607800 0 0 4777800 2384 1163 2413 10587;10588;10589;10590 7024;7025;7026;7027;7028;7029 7027 6 FLRSIRPDNMSEYSK YHSDDYIKFLRSIRPD DNMSEYSKQMQRFNVG K F L S K Q 0 2 1 1 0 0 1 0 0 1 1 1 1 1 1 3 0 0 1 0 0 15 2 1841.9094 Q92769;H3BM24;B3KRS5;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;Q13547;Q5TEE2 Q13547 75 89 HDAC2;HDAC1 Histone deacetylase 2;Histone deacetylase;Histone deacetylase 1 no no 3;4 0.00024893 86.262 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 2 3 2 2 3 315080000 8070100 25508000 72024000 14512000 11852000 183120000 2385 1086;1358 2414 10591;10592;10593;10594;10595;10596;10597;10598;10599;10600;10601;10602;10603;10604;10605 7030;7031;7032;7033;7034;7035;7036 7030 7 FLSLQSEHK HFAELQEKFLSLQSEH LSLQSEHKILHDQHCQ K F L H K I 0 0 0 0 0 1 1 0 1 0 2 1 0 1 0 2 0 0 0 0 0 9 0 1087.5662 P49454 P49454 1411 1419 CENPF Centromere protein F yes yes 2 0.010415 84.615 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1825600 0 626840 0 233400 0 965350 2386 936 2415 10606;10607;10608 7037 7037 1 FLSREDQVILR GTSLEVARFLSREDQV REDQVILRLRGLPFSA R F L L R L 0 2 0 1 0 1 1 0 0 1 2 0 0 1 0 1 0 0 0 1 0 11 1 1374.7619 Q9H6T0-2;Q9H6T0 Q9H6T0-2 341 351 ESRP2 Epithelial splicing regulatory protein 2 yes no 3 0.0098672 65.278 By matching By matching By matching By matching By matching By MS/MS 1 2139300 0 0 0 0 0 2139300 2387 1498 2416 10609 7038;7039 7038 2 FLTGLAGASDTNSSK F L S K 2 0 1 1 0 0 0 2 0 0 2 1 0 1 0 3 2 0 0 0 0 15 0 1467.7205 REV__E7ESA7 yes no 3 0.0042909 52.891 By matching By matching By MS/MS By matching By matching By matching 1 6765000 0 0 6765000 0 0 0 + 2388 1671 2417 10610 7040 7040 1 FLVSQNVDGLHVR LERVGLLRFLVSQNVD NVDGLHVRSGFPRDKL R F L V R S 0 1 1 1 0 1 0 1 1 0 2 0 0 1 0 1 0 0 0 3 0 13 0 1482.7943 Q8N6T7-4;Q8N6T7-2;Q8N6T7;B4DDV3 Q8N6T7-4 67 79 SIRT6 NAD-dependent protein deacetylase sirtuin-6 yes no 2;3 0.0042879 61.11 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 40813000 0 4658100 0 0 0 36155000 2389 1306 2418 10611;10612;10613 7041;7042;7043 7041 3 FLVTPQDYAR AEVQMKEKFLVTPQDY VTPQDYARFKKSMVKG K F L A R F 1 1 0 1 0 1 0 0 0 0 1 0 0 1 1 0 1 0 1 1 0 10 0 1208.619 Q86UT8;E9PJ16;E9PPT8 Q86UT8 119 128 CCDC84 Coiled-coil domain-containing protein 84 yes no 2 6.9298E-48 140.16 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 364590000 38360000 66104000 43532000 15093000 123010000 78490000 2390 1263 2419 10614;10615;10616;10617;10618;10619;10620 7044;7045;7046;7047;7048;7049 7048 6 FLVTPQDYARFKK AEVQMKEKFLVTPQDY QDYARFKKSMVKGLDS K F L K K S 1 1 0 1 0 1 0 0 0 0 1 2 0 2 1 0 1 0 1 1 0 13 2 1611.8773 Q86UT8;E9PJ16 Q86UT8 119 131 CCDC84 Coiled-coil domain-containing protein 84 yes no 4 0.016341 49.632 By matching By matching By matching By MS/MS By matching By matching 1 1678600 0 0 0 1678600 0 0 2391 1263 2420 10621 7050 7050 1 FMATLGPEEEAEK RVTAHWEKFMATLGPE GPEEEAEKAQADFVKS K F M E K A 2 0 0 0 0 0 4 1 0 0 1 1 1 1 1 0 1 0 0 0 0 13 0 1450.665 Q9UFC0;H7C5S6 Q9UFC0 152 164 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes no 2 0.0030946 64.104 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 4478500 0 1172100 0 639320 0 2667100 2392 1587 2421 10622;10623;10624 7051;7052;7053 7052 3 FMGTELNGK DGKWERKKFMGTELNG MGTELNGKTLGILGLG K F M G K T 0 0 1 0 0 0 1 2 0 0 1 1 1 1 0 0 1 0 0 0 0 9 0 995.47462 O43175;Q5SZU1;F5H634 O43175 138 146 PHGDH D-3-phosphoglycerate dehydrogenase yes no 2 0.0066274 91.087 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 6603300 0 730960 843580 705190 1544700 2778800 2393 711 2422 10625;10626;10627;10628;10629 7054 7054 1 FMNHCCQPNCETQK GPKGNYARFMNHCCQP QPNCETQKWSVNGDTR R F M Q K W 0 0 2 0 3 2 1 0 1 0 0 1 1 1 1 0 1 0 0 0 0 14 0 1852.7113 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 1749 1762 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 3 0.0012515 82.774 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 3930700 0 770270 469830 472390 672530 1545700 2394 1404 2423 10630;10631;10632;10633;10634 7055 7055 1 FMQEVYLDK GAVPGITKFMQEVYLD MQEVYLDKFIRLLDAP K F M D K F 0 0 0 1 0 1 1 0 0 0 1 1 1 1 0 0 0 0 1 1 0 9 0 1171.5583 Q9NVN8;Q52LT0 Q9NVN8 289 297 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes no 2 0.006502 91.658 By matching By matching By matching By matching By matching By MS/MS 1 1 1772800 0 360310 0 0 0 1412500 2395 1549 2424 10635;10636 7056 7056 1 FMQRGLDSETK SKNLLRMKFMQRGLDS RGLDSETKKQLEEEEK K F M T K K 0 1 0 1 0 1 1 1 0 0 1 1 1 1 0 1 1 0 0 0 0 11 1 1310.6289 Q99547;H3BNK8;H3BU96 Q99547 18 28 MPHOSPH6 M-phase phosphoprotein 6 yes no 2;3 0.005387 72.848 By matching By matching By MS/MS By matching By matching By MS/MS 2 1 1 1 2 6828000 0 1150100 957750 493070 1250600 2976400 2396 1427 2425 10637;10638;10639;10640;10641;10642;10643 7057;7058;7059 7058 3 FMSVQRPGPYDRPGTAR SYSDPPLKFMSVQRPG YDRPGTARRYIGIVKQ K F M A R R 1 3 0 1 0 1 0 2 0 0 0 0 1 1 3 1 1 0 1 1 0 17 2 1933.9581 P52597;B4DKS8 P52597 201 217 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 3;4 0.0059818 78.902 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 2 2 2 610300000 11908000 0 68026000 70491000 151230000 308640000 2397 958 2426 10644;10645;10646;10647;10648;10649;10650;10651;10652 7060;7061;7062 7062 3 FNAHGDANTIVCNSK LCLHFNPRFNAHGDAN NTIVCNSKDGGAWGTE R F N S K D 2 0 3 1 1 0 0 1 1 1 0 1 0 1 0 1 1 0 0 1 0 15 0 1646.7471 P09382 P09382 50 64 LGALS1 Galectin-1 yes yes 2;3 0.0011114 69.045 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 1 2 2 89456000 1914200 19355000 7967000 3938500 12656000 43625000 2398 812 2427 10653;10654;10655;10656;10657;10658;10659;10660;10661;10662 7063;7064;7065;7066;7067;7068;7069 7063 7 FNAHGDANTIVCNSKDGGAWGTEQR LCLHFNPRFNAHGDAN GAWGTEQREAVFPFQP R F N Q R E 3 1 3 2 1 1 1 4 1 1 0 1 0 1 0 1 2 1 0 1 0 25 1 2704.2048 P09382 P09382 50 74 LGALS1 Galectin-1 yes yes 4 0.012198 35.16 By matching By MS/MS By matching By matching By matching By matching 1 1032900 0 1032900 0 0 0 0 2399 812 2428 10663 7070 7070 1 FNQNRPWSETIK LLERLHAKFNQNRPWS RPWSETIKLVRQVMEK K F N I K L 0 1 2 0 0 1 1 0 0 1 0 1 0 1 1 1 1 1 0 0 0 12 1 1518.7579 Q15648;Q15648-3 Q15648 27 38 MED1 Mediator of RNA polymerase II transcription subunit 1 yes no 3 0.015937 54.343 By matching By matching By matching By matching By matching By MS/MS 1 1 1837300 0 0 0 0 384820 1452500 2400 1143 2429 10664;10665 7071 7071 1 FNTTSVIK AQIFRPLKFNTTSVIK FNTTSVIKIAVEPVNP K F N I K I 0 0 1 0 0 0 0 0 0 1 0 1 0 1 0 1 2 0 0 1 0 8 0 908.49673 B4DK30;Q15029 B4DK30 547 554 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes no 2 0.02381 76.679 By matching By matching By matching By matching By matching By MS/MS 1 1398900 0 0 0 0 0 1398900 2401 92 2430 10666 7072 7072 1 FNVWDTAGQEK HTNRGPIKFNVWDTAG WDTAGQEKFGGLRDGY K F N E K F 1 0 1 1 0 1 1 1 0 0 0 1 0 1 0 0 1 1 0 1 0 11 0 1293.599 P62826;B5MDF5;F5H018;H0YFC6 P62826 61 71 RAN GTP-binding nuclear protein Ran yes no 2 0.010566 64.224 By matching By MS/MS By matching By matching By matching By matching 1 1 7296100 0 791320 0 0 0 6504800 2402 173 2431 10667;10668 7073 7073 1 FQAFKGVGCLYEK KENNLKPKFQAFKGVG GVGCLYEKESMKKSLK K F Q E K E 1 0 0 0 1 1 1 2 0 0 1 2 0 2 0 0 0 0 1 1 0 13 1 1545.765 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;Q76FK4-3 F5H101 570 582 NOL8 Nucleolar protein 8 yes no 3 0.0015585 88.224 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 49791000 0 10426000 0 39364000 0 0 2403 27 2432 10669;10670 7074;7075 7074 2 FQEEANLYAAK RYKKNIGKFQEEANLY EANLYAAKTAVTAAHA K F Q A K T 3 0 1 0 0 1 2 0 0 0 1 1 0 1 0 0 0 0 1 0 0 11 0 1282.6194 P40426-4;P40426-3;B7Z5Q0;P40426-2;E9PB27;P40426;Q5JS98 P40426-4 119 129 PBX3 Pre-B-cell leukemia transcription factor 3 yes no 2 0.0027813 85.813 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 11554000 249320 2512600 1115400 1345200 1259700 5071600 2404 191 2433 10671;10672;10673;10674;10675;10676 7076;7077 7077 2 FQETEFLSPPRKVPR QKRIDQSKFQETEFLS SPPRKVPRLSEKSVEE K F Q P R L 0 2 0 0 0 1 2 0 0 0 1 1 0 2 3 1 1 0 0 1 0 15 2 1829.9788 P42166 P42166 417 431 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 3;4 2.804E-21 111.88 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 3 2 4 1 365980000 95017000 29941000 94543000 20389000 51058000 75031000 2405 913 2434 10677;10678;10679;10680;10681;10682;10683;10684;10685;10686;10687;10688;10689 7078;7079;7080;7081;7082;7083;7084;7085;7086;7087 7084 10 FQGASNLTLSETQNGDVSEETMGSRKVK KLRQRNLKFQGASNLT TMGSRKVKKSKQKPMN K F Q V K K 1 1 2 1 0 2 3 3 0 0 2 2 1 1 0 4 3 0 0 2 0 28 2 3012.4458 Q9NVP1 Q9NVP1 27 54 DDX18 ATP-dependent RNA helicase DDX18 yes yes 4 1.137E-17 66.609 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 29466000 15048000 685280 7167500 2015700 1080700 3468800 2406 1550 2435 10690;10691;10692;10693;10694;10695 7088;7089;7090;7091;7092 7089 5 FQGEPKKPPMNGYQK TNSSKKMKFQGEPKKP PPMNGYQKFSQELLSN K F Q Q K F 0 0 1 0 0 2 1 2 0 0 0 3 1 1 3 0 0 0 1 0 0 15 2 1747.8716 E9PKP7;P17480-2;P17480;E9PLT2 E9PKP7 526 540 UBTF Nucleolar transcription factor 1 yes no 4 0.0022143 59.225 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 7493700 1131900 961560 903720 841060 1379500 2276000 2407 455 2436 10696;10697;10698;10699;10700;10701 7093 7093 1 FQGSGAATETAESR GGKALSEKFQGSGAAT ATETAESRRRSSSDTA K F Q S R R 3 1 0 0 0 1 2 2 0 0 0 0 0 1 0 2 2 0 0 0 0 14 0 1410.6375 O15047;C9J2Z9 O15047 204 217 SETD1A Histone-lysine N-methyltransferase SETD1A yes no 2 0.0014291 83.692 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 7402700 948590 1514300 582720 427340 1464700 2465100 2408 703 2437 10702;10703;10704;10705;10706;10707 7094;7095;7096;7097;7098 7096 5 FQIAQYK ELMRRVRRFQIAQYKC RFQIAQYKCLVIKYAK R F Q Y K C 1 0 0 0 0 2 0 0 0 1 0 1 0 1 0 0 0 0 1 0 0 7 0 896.4756 P04183 P04183 43 49 TK1 Thymidine kinase, cytosolic yes yes 2 0.015516 103.29 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 17341000 3654800 0 2070800 1086900 1522600 9005500 2409 787 2438 10708;10709;10710;10711;10712 7099 7099 1 FQPASAPAEDCISSSTEPKPDPK MGGSAPAKFQPASAPA TEPKPDPKKAKAPGLS K F Q P K K 3 0 0 2 1 1 2 0 0 1 0 2 0 1 5 4 1 0 0 0 0 23 1 2458.1322 Q14008-2;Q14008;Q14008-3 Q14008-2 1103 1125 CKAP5 Cytoskeleton-associated protein 5 yes no 3 0.0034839 47.603 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 23528000 0 5244500 5980400 4969700 7333400 0 2410 1093 2439 10713;10714;10715;10716 7100;7101;7102 7100 3 FQPPQVPDQAPAEAPTEK NKRRCKNKFQPPQVPD PAEAPTEKTEVSPVPR K F Q E K T 3 0 0 1 0 3 2 0 0 0 0 1 0 1 5 0 1 0 0 1 0 18 0 1948.9531 E9PPY3;O43159 E9PPY3 202 219 RRP8 Ribosomal RNA-processing protein 8 yes no 2 0.00746 44.391 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 4144400 1585600 2558800 0 0 0 0 2411 462 2440 10717;10718 7103;7104 7103 2 FQRPGDPQSAQDK GHIASDCKFQRPGDPQ DPQSAQDKARMDKEYL K F Q D K A 1 1 0 2 0 3 0 1 0 0 0 1 0 1 2 1 0 0 0 0 0 13 1 1472.7008 H7C561;Q15637-6;Q15637-4;Q15637-3;Q15637-2;Q15637 Q15637-6 294 306 SF1 Splicing factor 1 no no 3 0.0021661 71.888 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 43153000 6073000 6492200 4773900 3073500 7020200 15721000 2412 1141;674 2441 10719;10720;10721;10722;10723;10724;10725 7105;7106;7107;7108;7109;7110;7111 7109 7 FQRPGDPQSAQDKAR GHIASDCKFQRPGDPQ QSAQDKARMDKEYLSL K F Q A R M 2 2 0 2 0 3 0 1 0 0 0 1 0 1 2 1 0 0 0 0 0 15 2 1699.839 H7C561;Q15637-6;Q15637-4;Q15637-3;Q15637-2;Q15637 Q15637-6 294 308 SF1 Splicing factor 1 no no 3;4 0.0022412 60.968 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 1 2 137880000 13567000 29323000 10277000 5626300 20532000 58557000 2413 1141;674 2442 10726;10727;10728;10729;10730;10731;10732;10733;10734;10735;10736 7112;7113;7114;7115;7116 7115 5 FQRQAANLQDCYR DLNRLAKKFQRQAANL ANLQDCYRLYQGINQL K F Q Y R L 2 2 1 1 1 3 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 13 1 1668.7791 B4E2Z2;P43246;E9PHA6;E7EU21;B4DL39;B4DSB9;E7EQQ1;E9PCI8 B4E2Z2 328 340 MSH2 DNA mismatch repair protein Msh2 yes no 3 0.019252 49.243 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2744000 0 807230 0 0 655770 1281000 2414 162 2443 10737;10738;10739 7117 7117 1 FQSEEQQQTEDELQDK RINKKIEKFQSEEQQQ TEDELQDKIHPFAQTQ K F Q D K I 0 0 0 2 0 5 4 0 0 0 1 1 0 1 0 1 1 0 0 0 0 16 0 1980.8549 CON__P02666 CON__P02666 33 48 yes yes 2 0.01235 44.045 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 5807200 0 1298700 1106500 884290 1865500 652230 + 2415 290 2444 10740;10741;10742;10743;10744 7118;7119 7118 2 FQSFQDHKLK CEINYVKKFQSFQDHK SFQDHKLKISKEDSKI K F Q L K I 0 0 0 1 0 2 0 0 1 0 1 2 0 2 0 1 0 0 0 0 0 10 1 1276.6564 Q14331;E9PLY7;Q9BZ01 Q14331 213 222 FRG1;FRG1B Protein FRG1;Protein FRG1B yes no 3 3.9277E-06 112.71 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 11215000 0 2366100 3032300 1499800 0 4316500 2416 1106 2445 10745;10746;10747;10748 7120;7121 7120 2 FQVATDALK QQLRDLGKFQVATDAL QVATDALKSREPQAKP K F Q L K S 2 0 0 1 0 1 0 0 0 0 1 1 0 1 0 0 1 0 0 1 0 9 0 991.53385 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9;H0YH75 Q14980-2 1686 1694 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 0.025285 66.92 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 5581400 0 766520 305960 0 1144100 3364800 2417 1121 2446 10749;10750;10751;10752 7122 7122 1 FQVVINGR PPHEPRFKFQVVINGR FQVVINGREFPPAEAG K F Q G R E 0 1 1 0 0 1 0 1 0 1 0 0 0 1 0 0 0 0 0 2 0 8 0 931.52395 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 537 544 ADAR Double-stranded RNA-specific adenosine deaminase no no 2 0.015951 83.206 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 41763000 3540800 0 4037500 2593200 9325000 22266000 2418 352;968 2447 10753;10754;10755;10756;10757 7123;7124 7124 2 FQYCVAVGAQTFPSVSAPSKK EGPAHEPKFQYCVAVG SVSAPSKKVAKQMAAE K F Q K K V 3 0 0 0 1 2 0 1 0 0 0 2 0 2 2 3 1 0 1 3 0 21 1 2271.1358 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 646 666 ADAR Double-stranded RNA-specific adenosine deaminase no no 3 2.7191E-185 151.22 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 225760000 0 173510000 0 52247000 0 0 2419 352;968 2448 10758;10759 7125;7126 7125 2 FREDHPDLIQNAK EFERNLARFREDHPDL PDLIQNAKKSDIPEKP R F R A K K 1 1 1 2 0 1 1 0 1 1 1 1 0 1 1 0 0 0 0 0 0 13 1 1581.79 E9PKP7;P17480-2;P17480 E9PKP7 179 191 UBTF Nucleolar transcription factor 1 yes no 3 1.6925E-131 158.34 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 30642000 4262800 0 2989300 3171800 10525000 9693300 2420 455 2449 10760;10761;10762;10763;10764 7127;7128;7129;7130 7129 4 FREDHPDLIQNAKK EFERNLARFREDHPDL DLIQNAKKSDIPEKPK R F R K K S 1 1 1 2 0 1 1 0 1 1 1 2 0 1 1 0 0 0 0 0 0 14 2 1709.8849 E9PKP7;P17480-2;P17480 E9PKP7 179 192 UBTF Nucleolar transcription factor 1 yes no 4 4.2283E-30 117.27 By MS/MS By matching By matching By matching By MS/MS By MS/MS 2 1 1 1 1 1 14676000 3876900 1551400 1155700 1001500 3676700 3413900 2421 455 2450 10765;10766;10767;10768;10769;10770;10771 7131;7132;7133 7132 3 FREIQQELSSGRNEGQLNGETNTPIEGNQAGDAAASAR FRSFVVSKFREIQQEL GDAAASARSLPNEEIV K F R A R S 5 3 4 1 0 4 5 5 0 2 2 0 0 1 1 3 2 0 0 0 0 38 2 4014.9016 P18583-2;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-6;P18583-8 P18583-2 17 54 SON Protein SON yes no 4 0.035437 16.945 By matching By MS/MS By matching By matching By matching By matching 1 2326800 0 2326800 0 0 0 0 2422 854 2451 10772 7134 7134 1 FRISNSSTANRVK RSAIEQVRFRISNSST SSTANRVKTSQPPVPQ R F R V K T 1 2 2 0 0 0 0 0 0 1 0 1 0 1 0 3 1 0 0 1 0 13 2 1478.7954 Q12789-3;Q12789;H7BYG6 Q12789-3 712 724 GTF3C1 General transcription factor 3C polypeptide 1 yes no 3 0.020044 59.294 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 13083000 0 1593600 2108400 988300 0 8392700 2423 1059 2452 10773;10774;10775;10776 7135;7136 7136 2 FRLDNTLGGTSEVIHRK LSAEEQAKFRLDNTLG TSEVIHRKALQRIYAD K F R R K A 0 2 1 1 0 0 1 2 1 1 2 1 0 1 0 1 2 0 0 1 0 17 2 1942.0385 Q96ST3 Q96ST3 651 667 SIN3A Paired amphipathic helix protein Sin3a yes yes 4 0.0047168 47 By matching By matching By matching By matching By matching By MS/MS 1 1 2849000 0 263340 0 0 0 2585700 2424 1420 2453 10777;10778 7137 7137 1 FRMLSQDAPTVKESCK KVSKMEQKFRMLSQDA PTVKESCKTSSNNNSM K F R C K T 1 1 0 1 1 1 1 0 0 0 1 2 1 1 1 2 1 0 0 1 0 16 2 1895.9234 O60934;F5H3R2 O60934 393 408 NBN Nibrin yes no 3 0.0084432 55.975 By matching By matching By MS/MS By matching By matching By matching 1 1 1532500 0 0 892090 640450 0 0 2425 736 2454 10779;10780 7138 7138 1 FRYLNEQLYSGPSSAAQR AQRLDGARFRYLNEQL GPSSAAQRLFQEDPEA R F R Q R L 2 2 1 0 0 2 1 1 0 0 2 0 0 1 1 3 0 0 2 0 0 18 1 2086.0232 E9PPY3;O43159 E9PPY3 251 268 RRP8 Ribosomal RNA-processing protein 8 yes no 3 0.022017 71.376 By matching By MS/MS By matching By matching By matching By matching 1 1 8327500 0 5539300 0 2788200 0 0 2426 462 2455 10781;10782 7139 7139 0 FSADAARFQIGK GAKFDTRRFSADAARF AARFQIGKRKYDFDSS R F S G K R 3 1 0 1 0 1 0 1 0 1 0 1 0 2 0 1 0 0 0 0 0 12 1 1309.6779 Q9Y2R4;F5H5G9;F5H0R7 Q9Y2R4 21 32 DDX52 Probable ATP-dependent RNA helicase DDX52 yes no 2;3 8.5445E-37 128.57 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 2 1 2 1 25540000 2050800 1147000 7701100 1053400 10560000 3027100 2427 1635 2456 10783;10784;10785;10786;10787;10788;10789;10790 7140;7141;7142;7143;7144 7142 4 FSAGGDSDPPLK TERLGKRKFSAGGDSD GDSDPPLKRSLAQRLG K F S L K R 1 0 0 2 0 0 0 2 0 0 1 1 0 1 2 2 0 0 0 0 0 12 0 1189.5615 B4DLG2;O75152;E9PQ61;E9PBY7 B4DLG2 235 246 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 0.0018067 80.318 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 20923000 2509100 2177500 1726000 2654500 6341500 5514900 2428 97 2457 10791;10792;10793;10794;10795;10796 7145;7146;7147 7146 3 FSAGGDSDPPLKR TERLGKRKFSAGGDSD DSDPPLKRSLAQRLGK K F S K R S 1 1 0 2 0 0 0 2 0 0 1 1 0 1 2 2 0 0 0 0 0 13 1 1345.6626 B4DLG2;O75152;E9PQ61;E9PBY7 B4DLG2 235 247 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 3 0.0048869 56.139 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 4804600 1344700 0 618630 0 2515300 325980 2429 97 2458 10797;10798;10799;10800 7148 7148 1 FSAPRHGSLGFLPRK ________________ SLGFLPRKRSSRHRGK K F S R K R 1 2 0 0 0 0 0 2 1 0 2 1 0 2 2 2 0 0 0 0 0 15 2 1668.9212 P39023;H7C422;H7C3M2;F8WCR1 P39023 6 20 RPL3 60S ribosomal protein L3 yes no 3;4 0.0026783 76.868 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 2 2 2 3 37618000 2861400 0 3757700 8354500 11625000 11019000 2430 905 2459 10801;10802;10803;10804;10805;10806;10807;10808;10809;10810 7149;7150;7151;7152;7153;7154 7153 6 FSCDTDGEPVPTVTWLRK VYEGESARFSCDTDGE PTVTWLRKGQVLSTSA R F S R K G 0 1 0 2 1 0 1 1 0 0 1 1 0 1 2 1 3 1 0 2 0 18 1 2107.0044 E7ENC6;Q8WZ42-3;Q8WZ42-10;Q8WZ42-9;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42;Q8WZ42-8 E7ENC6 26080 26097 TTN Titin yes no 3 0.034191 31.111 By matching By matching By MS/MS By matching By matching By matching 1 989440 0 0 989440 0 0 0 2431 349 2460 10811 7155 7155 1 FSDEYLTK LRAKTIVKFSDEYLTK FSDEYLTKQWKYPIEL K F S T K Q 0 0 0 1 0 0 1 0 0 0 1 1 0 1 0 1 1 0 1 0 0 8 0 1001.4706 O95243-2 O95243-2 513 520 MBD4 Methyl-CpG-binding domain protein 4 no no 2 0.019305 80.455 By matching By matching By matching By matching By MS/MS By matching 1 1 1 6866400 917920 0 0 0 1900100 4048400 2432 769 2461 10812;10813;10814 7156 7156 1 FSEILETSSTK EDPTLRNRFSEILETS ILETSSTKLHPDVPTD R F S T K L 0 0 0 0 0 0 2 0 0 1 1 1 0 1 0 3 2 0 0 0 0 11 0 1240.6187 Q6W2J9;Q6W2J9-4;Q6W2J9-2;H7BYY2;Q6W2J9-3;A1A564 Q6W2J9 764 774 BCOR BCL-6 corepressor yes no 2 0.02083 55.261 By matching By matching By matching By matching By matching By MS/MS 1 735590 0 0 0 0 0 735590 2433 1237 2462 10815 7157 7157 1 FSENPHVYQR SLQQSVRKFSENPHVY ENPHVYQRHHLPPPGP K F S Q R H 0 1 1 0 0 1 1 0 1 0 0 0 0 1 1 1 0 0 1 1 0 10 0 1275.5996 O75319 O75319 267 276 DUSP11 RNA/RNP complex-1-interacting phosphatase yes yes 3 0.032268 53.756 By MS/MS By matching By matching By matching By matching By matching 1 712220 712220 0 0 0 0 0 2434 739 2463 10816 7158 7158 1 FSEQGGTPQNVATSSSLTAHLR EEENVVLKFSEQGGTP SSLTAHLRSLSKGDSP K F S L R S 2 1 1 0 0 2 1 2 1 0 2 0 0 1 1 4 3 0 0 1 0 22 0 2287.1193 Q9H1A4 Q9H1A4 285 306 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 3 9.0585E-92 126.09 By matching By matching By matching By matching By matching By MS/MS 1 6639100 0 0 0 0 0 6639100 2435 1483 2464 10817 7159 7159 1 FSGEEGEIEDDESGTENREEK SPKWAHDKFSGEEGEI GTENREEKDNIQPTTE K F S E K D 0 1 1 2 0 0 8 3 0 1 0 1 0 1 0 2 1 0 0 0 0 21 1 2384.9728 Q9Y2W1 Q9Y2W1 927 947 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 4.0135E-06 66.264 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 5900300 0 1022400 1598300 809440 1327400 1142700 2436 1639 2465 10818;10819;10820;10821;10822 7160;7161;7162;7163 7162 4 FSGFSAKPNNSGEAPSSPTPK VTSTNPRKFSGFSAKP APSSPTPKRSLSSSKC K F S P K R 2 0 2 0 0 0 1 2 0 0 0 2 0 2 4 5 1 0 0 0 0 21 1 2106.0018 P49916-2;P49916 P49916-2 226 246 LIG3 DNA ligase 3 yes no 3 7.0116E-33 102.98 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 12780000 5055400 1825900 0 1679000 2887300 1333000 2437 947 2466 10823;10824;10825;10826;10827 7164;7165;7166;7167;7168 7168 5 FSGGFGARDYRQSSGASSSSFSSSR RGRSKSSRFSGGFGAR SSSFSSSRASSSRSGG R F S S R A 2 3 0 1 0 1 0 4 0 0 0 0 0 3 0 10 0 0 1 0 0 25 2 2574.1484 O00571;O00571-2;B4DLU5 O00571 593 617 DDX3X ATP-dependent RNA helicase DDX3X yes no 4 0.010126 35.246 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 12201000 1801700 0 2063300 1784000 2929600 3622300 2438 693 2467 10828;10829;10830;10831;10832 7169;7170 7170 2 FSIEDLKAQPK LEKGVDVKFSIEDLKA EDLKAQPKQTTCWDGV K F S P K Q 1 0 0 1 0 1 1 0 0 1 1 2 0 1 1 1 0 0 0 0 0 11 1 1274.6871 Q9P016;Q9P016-2;E9PPQ6 Q9P016 75 85 THYN1 Thymocyte nuclear protein 1 yes no 3 3.8345E-05 102.06 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 9524800 4852400 0 0 0 0 4672400 2439 1570 2468 10833;10834 7171;7172 7172 2 FSKEQLPIFKAQNPDAK KPVSSYLRFSKEQLPI KAQNPDAKTTELIRRI R F S A K T 2 0 1 1 0 2 1 0 0 1 1 3 0 2 2 1 0 0 0 0 0 17 2 1960.0418 Q00059;A8MRB2;H7BYN3 Q00059 60 76 TFAM Transcription factor A, mitochondrial yes no 4 0.0015403 57.936 By matching By matching By matching By matching By matching By MS/MS 1 1 5893800 0 0 0 718300 0 5175500 2440 1019 2469 10835;10836 7173 7173 1 FSLDSQVNHR SINSEVLKFSLDSQVN LDSQVNHRMKKELPSH K F S H R M 0 1 1 1 0 1 0 0 1 0 1 0 0 1 0 2 0 0 0 1 0 10 0 1201.584 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 2059 2068 SETX Probable helicase senataxin yes no 2 0.019099 64.374 By matching By matching By matching By matching By matching By MS/MS 1 1 3507000 0 0 869480 0 0 2637500 2441 1250 2470 10837;10838 7174 7174 1 FSLVDLAGNERGADTSSADRQTR AKGRMHGKFSLVDLAG SSADRQTRMEGAEINK K F S T R M 3 3 1 3 0 1 1 2 0 0 2 0 0 1 0 3 2 0 0 1 0 23 2 2465.1895 B7Z6Q6;Q99661;Q99661-2;B7Z7M6 B7Z6Q6 447 469 KIF2C Kinesin-like protein KIF2C yes no 3;4 1.8481E-08 65.416 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 2 573530000 98242000 76379000 331480000 40880000 26555000 0 2442 193 2471 10839;10840;10841;10842;10843;10844 7175;7176;7177;7178 7175 4 FSNSSSSNEFSK HEYGSCGRFSNSSSSN SSSNEFSKCDQYGSGS R F S S K C 0 0 2 0 0 0 1 0 0 0 0 1 0 2 0 6 0 0 0 0 0 12 0 1319.563 Q5D862;CON__Q5D862 Q5D862 404 415 FLG2 Filaggrin-2 yes no 2 2.3148E-18 116.63 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 8666500 671720 0 4017200 1504200 0 2473400 + 2443 306 2472 10845;10846;10847;10848 7179;7180;7181;7182;7183 7180 5 FSPNGEWLASSSADKLIK TKAVSSVKFSPNGEWL SSADKLIKIWGAYDGK K F S I K I 2 0 1 1 0 0 1 1 0 1 2 2 0 1 1 4 0 1 0 0 0 18 1 1948.9894 P61964 P61964 53 70 WDR5 WD repeat-containing protein 5 yes yes 3 0.0055026 59.606 By matching By matching By matching By matching By MS/MS By matching 1 3754000 0 0 0 0 3754000 0 2444 983 2473 10849 7184 7184 0 FSPVATASYR GIGKDHAKFSPVATAS PVATASYRLLPDITLL K F S Y R L 2 1 0 0 0 0 0 0 0 0 0 0 0 1 1 2 1 0 1 1 0 10 0 1097.5506 O15160-2;O15160 O15160-2 225 234 POLR1C DNA-directed RNA polymerases I and III subunit RPAC1 yes no 2 0.022744 61.344 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 6195000 820900 0 1427700 0 1945600 2000800 2445 704 2474 10850;10851;10852;10853 7185;7186 7185 2 FSQELLSNGELNHLPLKER PPMNGYQKFSQELLSN NHLPLKERMVEIGSRW K F S E R M 0 1 2 0 0 1 3 1 1 0 5 1 0 1 1 2 0 0 0 0 0 19 1 2223.1648 E9PKP7;P17480-2;P17480;E9PLT2 E9PKP7 541 559 UBTF Nucleolar transcription factor 1 yes no 4 0.0067715 44.539 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 81400000 0 21848000 0 10976000 0 48576000 2446 455 2475 10854;10855;10856 7187;7188 7187 2 FSSASGASARINSSSVK PGTACLSKFSSASGAS RINSSSVKQEATFCSQ K F S V K Q 3 1 1 0 0 0 0 1 0 1 0 1 0 1 0 7 0 0 0 1 0 17 1 1654.8275 Q9NQW6;Q9NQW6-2;H7C167;H7C0Y6 Q9NQW6 238 254 ANLN Actin-binding protein anillin yes no 3 0.015114 40.983 By MS/MS By matching By matching By MS/MS By matching By matching 2 1 1 1 1 7648600 2156400 1588900 2578700 968640 355990 0 2447 1533 2476 10857;10858;10859;10860;10861;10862 7189;7190 7189 2 FSSCGGGGGSFGAGGGFGSR RSGGGGGRFSSCGGGG AGGGFGSRSLVNLGGS R F S S R S 1 1 0 0 1 0 0 10 0 0 0 0 0 3 0 4 0 0 0 0 0 20 0 1764.7274 P04264;CON__P04264 P04264 46 65 KRT1 Keratin, type II cytoskeletal 1 yes no 2 9.6357E-05 76.78 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 5 4 4 4 3 4 69696000 9549200 10180000 13216000 9745100 13194000 13811000 + 2448 789 2477 10863;10864;10865;10866;10867;10868;10869;10870;10871;10872;10873;10874;10875;10876;10877;10878;10879;10880;10881;10882;10883;10884;10885;10886 7191;7192;7193;7194;7195;7196;7197;7198;7199;7200;7201;7202 7195 10 FSSCGGGGGSFGAGGGFGSRSLVNLGGSK RSGGGGGRFSSCGGGG LVNLGGSKSISISVAR R F S S K S 1 1 1 0 1 0 0 12 0 0 2 1 0 3 0 6 0 0 0 1 0 29 1 2620.2088 P04264;CON__P04264 P04264 46 74 KRT1 Keratin, type II cytoskeletal 1 yes no 3 3.7673E-12 59.687 By matching By matching By matching By MS/MS By matching By matching 1 11379000 0 0 0 11379000 0 0 + 2449 789 2478 10887 7203 7203 1 FSSLQCSSCDK AQNHRSSKFSSLQCSS LQCSSCDKTFPNTIEH K F S D K T 0 0 0 1 2 1 0 0 0 0 1 1 0 1 0 4 0 0 0 0 0 11 0 1317.5329 Q9NUA8;F8WAI8 Q9NUA8 1043 1053 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes no 2 5.9465E-42 134.38 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 27710000 5674200 3171000 5104000 3726300 5774400 4259800 2450 1545 2479 10888;10889;10890;10891;10892;10893;10894 7204;7205;7206;7207;7208 7207 5 FSSQQAATKQSNASSDVEVEEK IDNNPKVKFSSQQAAT SDVEVEEKETSVSKED K F S E K E 3 0 1 1 0 3 3 0 0 0 0 2 0 1 0 5 1 0 0 2 0 22 1 2369.0983 O75475;O75475-2 O75475 92 113 PSIP1 PC4 and SFRS1-interacting protein yes no 3 1.5182E-111 131.56 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 58805000 12896000 7268800 19780000 10897000 5278200 2685100 2451 741 2480 10895;10896;10897;10898;10899;10900;10901 7209;7210;7211;7212;7213;7214;7215 7213 7 FSSSGGGGGGGRFSSSSGYGGGSSR SIRSSYSRFSSSGGGG GYGGGSSRVCGRGGGG R F S S R V 0 2 0 0 0 0 0 11 0 0 0 0 0 2 0 9 0 0 1 0 0 25 1 2197.9373 P35527 P35527 35 59 KRT9 Keratin, type I cytoskeletal 9 yes yes 3 2.581E-12 66.308 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 2 2 1 2 27369000 3550300 580530 7136200 4932600 6557400 4612100 + 2452 899 2481 10902;10903;10904;10905;10906;10907;10908;10909;10910;10911 7216;7217;7218;7219;7220 7219 5 FSSSSGYGGGSSR GGGGGGGRFSSSSGYG GYGGGSSRVCGRGGGG R F S S R V 0 1 0 0 0 0 0 4 0 0 0 0 0 1 0 6 0 0 1 0 0 13 0 1234.5214 P35527;CON__P35527 P35527 47 59 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.0017006 86.288 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 3052400 0 464990 1967100 307590 312720 0 + 2453 899 2482 10912;10913;10914;10915 7221;7222 7221 2 FSSSSGYGGGSSRVCGR GGGGGGGRFSSSSGYG GSSRVCGRGGGGSFGY R F S G R G 0 2 0 0 1 0 0 5 0 0 0 0 0 1 0 6 0 0 1 1 0 17 1 1706.7431 P35527;CON__P35527 P35527 47 63 KRT9 Keratin, type I cytoskeletal 9 yes no 3 0.002115 60.657 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 8384300 0 1095200 2263100 1585600 1604000 1836300 + 2454 899 2483 10916;10917;10918;10919;10920 7223;7224;7225 7223 3 FSTPEQAAK FSESRNNRFSTPEQAA STPEQAAKNRIQHPSN R F S A K N 2 0 0 0 0 1 1 0 0 0 0 1 0 1 1 1 1 0 0 0 0 9 0 977.48181 P14866;A6NIT8 P14866 485 493 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 2 0.0065883 91.265 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 11664000 913340 2853600 0 1070200 1883000 4943700 2455 838 2484 10921;10922;10923;10924;10925 7226;7227;7228;7229;7230 7228 5 FSTPEQAAKNR FSESRNNRFSTPEQAA PEQAAKNRIQHPSNVL R F S N R I 2 1 1 0 0 1 1 0 0 0 0 1 0 1 1 1 1 0 0 0 0 11 1 1247.6258 P14866;A6NIT8 P14866 485 495 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 3 0.016095 58.63 By matching By matching By matching By matching By matching By MS/MS 1 613700 0 0 0 0 0 613700 2456 838 2485 10926 7231 7231 1 FSTRFHC LTVPVSPKFSTRFHC_ KFSTRFHC________ K F S H C - 0 1 0 0 1 0 0 0 1 0 0 0 0 2 0 1 1 0 0 0 0 7 1 953.41777 Q9ULW0;Q96RR5 Q9ULW0 741 747 TPX2;HCA90 Targeting protein for Xklp2 yes no 2 0.039234 91.9 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 2457 1611 2486 10927 7232 7232 1 FSTWEPTK KMQGVGEKFSTWEPTK FSTWEPTKRELELLKH K F S T K R 0 0 0 0 0 0 1 0 0 0 0 1 0 1 1 1 2 1 0 0 0 8 0 994.476 Q9UPT9-2;Q9UPT9 Q9UPT9-2 133 140 USP22 Ubiquitin carboxyl-terminal hydrolase 22 yes no 2 0.024294 76.221 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 7207600 532810 0 1538400 242390 1925700 2968300 2458 1621 2487 10928;10929;10930;10931;10932 7233 7233 1 FSVCVLGDQQHCDEAK LKSTPRPKFSVCVLGD QQHCDEAKAVDIPHMD K F S A K A 1 0 0 2 2 2 1 1 1 0 1 1 0 1 0 1 0 0 0 2 0 16 0 1891.8193 P62906 P62906 63 78 RPL10A 60S ribosomal protein L10a yes yes 3 6.6998E-07 90.476 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 32969000 0 4381400 4811400 1972600 16259000 5544300 2459 997 2488 10933;10934;10935;10936;10937 7234;7235;7236 7235 3 FSVSGEGEGDATYGK DGDVNGHKFSVSGEGE EGDATYGKLTLKFICT K F S G K L 1 0 0 1 0 0 2 4 0 0 0 1 0 1 0 2 1 0 1 1 0 15 0 1502.6525 CON__Q9U6Y5 CON__Q9U6Y5 27 41 yes yes 2 0.014789 44.925 By matching By MS/MS By matching By matching By matching By matching 1 1265000 0 1265000 0 0 0 0 + 2460 310 2489 10938 7237 7237 1 FTAILYR KDEAQKEKFTAILYRT KFTAILYRTLERRRLA K F T Y R T 1 1 0 0 0 0 0 0 0 1 1 0 0 1 0 0 1 0 1 0 0 7 0 882.49634 Q8IWC1-2;Q8IWC1;H7BY77;Q8IWC1-3 Q8IWC1-2 142 148 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.025785 86.866 By matching By matching By matching By matching By matching By MS/MS 1 1704100 0 0 0 0 0 1704100 2461 1280 2490 10939 7238 7238 1 FTDADKETEIVK NDDEDMEKFTDADKET DKETEIVKKLETEETV K F T V K K 1 0 0 2 0 0 2 0 0 1 0 2 0 1 0 0 2 0 0 1 0 12 1 1394.6929 Q03701;F5H3Y6 Q03701 647 658 CEBPZ CCAAT/enhancer-binding protein zeta yes no 3 0.012719 56.936 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 3882500 0 599740 985030 382400 651810 1263500 2462 1037 2491 10940;10941;10942;10943;10944 7239 7239 1 FTDLFEK VNVPISQKFTDLFEKM KFTDLFEKMVPVSVQQ K F T E K M 0 0 0 1 0 0 1 0 0 0 1 1 0 2 0 0 1 0 0 0 0 7 0 898.44363 Q8WUM4;E9PFU1 Q8WUM4 351 357 PDCD6IP Programmed cell death 6-interacting protein yes no 2 0.035543 84.498 By matching By matching By matching By matching By matching By MS/MS 1 1633200 0 0 0 0 0 1633200 2463 429 2492 10945 7240 7240 1 FTEYETQVK SKGFGFVRFTEYETQV TEYETQVKVMSQRHMI R F T V K V 0 0 0 0 0 1 2 0 0 0 0 1 0 1 0 0 2 0 1 1 0 9 0 1143.5448 Q13148;Q13148-2;B1AKP7;G3V162;B4DJ45 Q13148 152 160 TARDBP TAR DNA-binding protein 43 yes no 2 4.9295E-12 122.96 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 37967000 4189100 5808300 4152300 2165200 5820900 15831000 2464 1073 2493 10946;10947;10948;10949;10950;10951;10952 7241;7242;7243;7244;7245;7246;7247 7245 7 FTIENVTR AGKGGKTKFTIENVTR FTIENVTRTRIVLADV K F T T R T 0 1 1 0 0 0 1 0 0 1 0 0 0 1 0 0 2 0 0 1 0 8 0 978.51345 Q9NRX1 Q9NRX1 192 199 PNO1 RNA-binding protein PNO1 yes yes 2 1.1225E-58 146.58 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 15815000 1339300 2100700 2339100 2438600 0 7597700 2465 1538 2494 10953;10954;10955;10956;10957;10958 7248;7249;7250 7249 3 FTIRGVPQQIEVAR NSDPNLRRFTIRGVPQ PQQIEVARQLIDEKVG R F T A R Q 1 2 0 0 0 2 1 1 0 2 0 0 0 1 1 0 1 0 0 2 0 14 1 1612.9049 Q96I24 Q96I24 405 418 FUBP3 Far upstream element-binding protein 3 yes yes 3 3.4461E-20 110.55 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 51344000 0 16242000 0 0 0 35102000 2466 1394 2495 10959;10960 7251;7252 7252 2 FTKDVSHEIIQHEVK EPSEKIQKFTKDVSHE EIIQHEVKSSKNSASS K F T V K S 0 0 0 1 0 1 2 0 2 2 0 2 0 1 0 1 1 0 0 2 0 15 1 1808.9421 Q7Z6E9;Q7Z6E9-2;Q7Z6E9-4 Q7Z6E9 1376 1390 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 3;4 0.00070671 74.789 By MS/MS By MS/MS By matching By MS/MS By matching By matching 2 2 2 2 1 1 16599000 5175500 1964500 2706300 2924600 2245800 1582600 2467 1255 2496 10961;10962;10963;10964;10965;10966;10967;10968;10969;10970 7253;7254;7255;7256;7257;7258;7259;7260 7254 8 FTLAGHTK VKPNYALKFTLAGHTK FTLAGHTKAVSSVKFS K F T T K A 1 0 0 0 0 0 0 1 1 0 1 1 0 1 0 0 2 0 0 0 0 8 0 873.47085 P61964 P61964 39 46 WDR5 WD repeat-containing protein 5 yes yes 2 0.022624 77.732 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2918700 340220 880750 1581900 0 115770 0 2468 983 2497 10971;10972;10973;10974 7261;7262 7262 2 FTLYENKDSTNPR LQSPGNMRFTLYENKD NKDSTNPRKRNQRILA R F T P R K 0 1 2 1 0 0 1 0 0 0 1 1 0 1 1 1 2 0 1 0 0 13 1 1583.758 Q9GZS1-2;Q9GZS1;B4DW33 Q9GZS1-2 41 53 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes no 3 0.026375 46.069 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1633100 0 363220 0 476360 793540 0 2469 1475 2498 10975;10976;10977 7263 7263 1 FTLYENKDSTNPRK LQSPGNMRFTLYENKD KDSTNPRKRNQRILAA R F T R K R 0 1 2 1 0 0 1 0 0 0 1 2 0 1 1 1 2 0 1 0 0 14 2 1711.8529 Q9GZS1-2;Q9GZS1;B4DW33 Q9GZS1-2 41 54 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes no 3 0.0034559 73.36 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 9068200 761010 1275100 1045900 909280 1996000 3080800 2470 1475 2499 10978;10979;10980;10981;10982;10983 7264;7265;7266 7265 3 FTPELQPK VEPAGRSRFTPELQPK FTPELQPKASQSRKRS R F T P K A 0 0 0 0 0 1 1 0 0 0 1 1 0 1 2 0 1 0 0 0 0 8 0 958.51238 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7;Q14676-4 Q14676 1799 1806 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 2 0.0067418 106.36 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 11746000 1543800 1667400 0 1191300 3404100 3939100 2471 1109 2500 10984;10985;10986;10987;10988 7267;7268;7269 7268 3 FTQTSGETTDADKEPAGEDK KEEPSAVKFTQTSGET KEPAGEDKGIKALKES K F T D K G 2 0 0 3 0 1 3 2 0 0 0 2 0 1 1 1 4 0 0 0 0 20 1 2125.9288 P46013;F5H4V4;P46013-2 P46013 2742 2761 MKI67 Antigen KI-67 no no 3 0.0031959 47.68 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 8866100 0 2162600 1566500 832220 1362800 2942000 2472 919;920 2501 10989;10990;10991;10992;10993 7270;7271;7272;7273 7270 4 FTQTSGETTDADKEPAGEDKGIK KEEPSAVKFTQTSGET AGEDKGIKALKESAKQ K F T I K A 2 0 0 3 0 1 3 3 0 1 0 3 0 1 1 1 4 0 0 0 0 23 2 2424.1292 P46013;F5H4V4;P46013-2 P46013 2742 2764 MKI67 Antigen KI-67 no no 3;4 2.6573E-41 104.35 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 1 179970000 8383900 47457000 41969000 13809000 29171000 39181000 2473 919;920 2502 10994;10995;10996;10997;10998;10999;11000;11001;11002;11003;11004 7274;7275;7276;7277;7278;7279;7280;7281;7282 7278 9 FTRQGDFESDHSGYVRPVPVPR WAVYRLSKFTRQGDFE VRPVPVPRSLNSDISY K F T P R S 0 3 0 2 0 1 1 2 1 0 0 0 0 2 3 2 1 0 1 3 0 22 2 2545.2462 A6NHR9;A6NHR9-2 A6NHR9 205 226 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes no 4;5 5.4228E-05 69.975 By matching By matching By matching By matching By matching By MS/MS 1 1 2 2 1 2 76981000 9888300 2581400 19959000 9735600 3809600 31007000 2474 23 2503 11005;11006;11007;11008;11009;11010;11011;11012;11013 7283;7284 7283 2 FTRTSGETTHTHREPAGDGK EELLAVGKFTRTSGET REPAGDGKSIRTFKES K F T G K S 1 2 0 1 0 0 2 3 2 0 0 1 0 1 1 1 5 0 0 0 0 20 2 2184.0308 P46013;F5H4V4;P46013-2 P46013 1044 1063 MKI67 Antigen KI-67 no no 4 0.0025377 48.51 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 34541000 0 0 19339000 0 4242800 10959000 2475 919;920 2504 11014;11015;11016 7285;7286 7286 2 FTVETACK LCNIFSTKFTVETACK FTVETACKEYKHSFKQ K F T C K E 1 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 2 0 0 1 0 8 0 954.44807 Q02880-2;Q02880;E9PCY5 Q02880-2 193 200 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 2 7.4066E-05 114.5 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 15791000 1328200 3139100 4132900 774770 1248600 5166800 2476 1035 2505 11017;11018;11019;11020;11021;11022 7287;7288;7289;7290;7291 7288 5 FTVETASR LCNIFSTKFTVETASR FTVETASREYKKMFKQ K F T S R E 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 1 2 0 0 1 0 8 0 909.4556 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5 P11388 177 184 TOP2A DNA topoisomerase 2-alpha yes no 2 0.0061452 107.29 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5544500 460690 1712200 0 0 0 3371600 2477 655 2506 11023;11024;11025 7292 7292 1 FTVETASREYKK LCNIFSTKFTVETASR TASREYKKMFKQTWMD K F T K K M 1 1 0 0 0 0 2 0 0 0 0 2 0 1 0 1 2 0 1 1 0 12 2 1457.7514 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5 P11388 177 188 TOP2A DNA topoisomerase 2-alpha yes no 3 0.0031814 92.538 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 21393000 1559400 4455300 3675400 1237200 2973800 7491500 2478 655 2507 11026;11027;11028;11029;11030;11031 7293;7294 7294 2 FVAEGGPELEK KVIEKLARFVAEGGPE EGGPELEKVAMEDYKD R F V E K V 1 0 0 0 0 0 3 2 0 0 1 1 0 1 1 0 0 0 0 1 0 11 0 1174.587 Q8IWZ8 Q8IWZ8 198 208 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 2 0.014934 59.198 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 2 1 17542000 1474500 3222600 1750300 1211000 3625500 6257600 2479 1283 2508 11032;11033;11034;11035;11036;11037;11038 7295;7296;7297 7296 3 FVEQQSYK SSGSESFKFVEQQSYK FVEQQSYKRKSEQEFS K F V Y K R 0 0 0 0 0 2 1 0 0 0 0 1 0 1 0 1 0 0 1 1 0 8 0 1027.4975 Q99590-2;F8VXG7;Q99590 Q99590-2 802 809 SCAF11 Protein SCAF11 yes no 2 0.015715 83.948 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 7845300 962420 1475700 1244000 0 1368800 2794500 2480 547 2509 11039;11040;11041;11042;11043 7298;7299;7300 7299 3 FVGDATRLTDK HMKKSLEKFVGDATRL DATRLTDKLLELCNKP K F V D K L 1 1 0 2 0 0 0 1 0 0 1 1 0 1 0 0 2 0 0 1 0 11 1 1221.6354 Q13535-2;Q13535-3;Q13535;H0Y9K2 Q13535-2 2147 2157 ATR Serine/threonine-protein kinase ATR yes no 3 0.016152 75.652 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 2681100 0 0 1360600 0 0 1320600 2481 1085 2510 11044;11045;11046 7301;7302 7301 2 FVGNIYTLKCR PPQTSLVKFVGNIYTL NIYTLKCRFCEVEFQG K F V C R F 0 1 1 0 1 0 0 1 0 1 1 1 0 1 0 0 1 0 1 1 0 11 1 1369.7176 B7ZM82;B3KVH1;O95785;O95785-2 B7ZM82 903 913 WIZ Protein Wiz yes no 3 0.0045354 76.843 By MS/MS By matching By matching By matching By matching By matching 1 1469300 1469300 0 0 0 0 0 2482 212 2511 11047 7303 7303 1 FVIKRPELLTHSTTEVTQPR IQVGNRIKFVIKRPEL TTEVTQPRTNTPVKED K F V P R T 0 2 0 0 0 1 2 0 1 1 2 1 0 1 2 1 4 0 0 2 0 20 2 2351.2961 P78347-2;P78347-4;P78347-3;B4DH52;P78347 P78347-2 495 514 GTF2I General transcription factor II-I yes no 4 0.0025829 48.371 By matching By matching By matching By matching By matching By MS/MS 1 14420000 0 0 0 0 0 14420000 2483 90 2512 11048 7304 7304 1 FVINYDYPNSSEDYVHR GLDVEDVKFVINYDYP SSEDYVHRIGRTARST K F V H R I 0 1 2 2 0 0 1 0 1 1 0 0 0 1 1 2 0 0 3 2 0 17 0 2116.949 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 410 426 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 3 1.0124E-155 153.2 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 13931000 0 0 0 0 3577300 10354000 2484 1361;629 2513 11049;11050 7305;7306;7307 7305 3 FVQCPDGELQK DAMGSQTKFVQCPDGE CPDGELQKRKEVVHTV K F V Q K R 0 0 0 1 1 2 1 1 0 0 1 1 0 1 1 0 0 0 0 1 0 11 0 1319.618 Q9Y230;B3KQ59 Q9Y230 224 234 RUVBL2 RuvB-like 2 yes no 2 0.0021961 88.596 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 33303000 0 0 3841800 2357700 12906000 14198000 2485 1627 2514 11051;11052;11053;11054 7308;7309;7310;7311 7308 4 FWIQKLPK KKQKSTKKFWIQKLPK FWIQKLPKVLCLHLKR K F W P K V 0 0 0 0 0 1 0 0 0 1 1 2 0 1 1 0 0 1 0 0 0 8 1 1058.6277 Q6JHV3;H0YMI4;Q9Y6I4;B3KMX7;H0YLB7;H0YKU8;F5H1A6;B4DWJ6 Q6JHV3 376 383 USP3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 2 0.020637 98.523 By matching By matching By matching By matching By matching By MS/MS 1 6646200 0 0 0 0 0 6646200 2486 628 2515 11055 7312 7312 1 FYCDYCDTYLTHDSPSVRK ________________ HDSPSVRKTHCSGRKH K F Y R K T 0 1 0 3 2 0 0 0 1 0 1 1 0 1 1 2 2 0 3 1 0 19 1 2426.0307 P09234 P09234 4 22 SNRPC U1 small nuclear ribonucleoprotein C yes yes 3;4 0.00023615 79.393 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 23036000 17688000 0 0 2510200 0 2837200 2487 811 2516 11056;11057;11058 7313;7314;7315 7315 3 FYEDYQEK RIPESLRRFYEDYQEK FYEDYQEKSGLHTL__ R F Y E K S 0 0 0 1 0 1 2 0 0 0 0 1 0 1 0 0 0 0 2 0 0 8 0 1120.4713 Q8NB90 Q8NB90 880 887 SPATA5 Spermatogenesis-associated protein 5 yes yes 2 0.015759 83.783 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 3824500 0 590770 310340 0 1049300 1874000 2488 1315 2517 11059;11060;11061;11062 7316;7317 7317 2 FYEEVHDLERK RCAHIEAKFYEEVHDL EVHDLERKYAALYQPL K F Y R K Y 0 1 0 1 0 0 3 0 1 0 1 1 0 1 0 0 0 0 1 1 0 11 1 1463.7045 E9PNW0;F8VRJ2;E9PJJ2;F5H1X5;E9PS34;E9PNJ7;A8MXH2;F8VVB5;E9PKT8;H0YH88;C9J6D1;H0YHC3;F8W020;F8W118;F8VXI6;F8VUX1;F8VY35;C9JZI7;B3KV44;F8VV59;F8W543;B7Z9C2;B3KNT8;Q99733;F8W0J6;F5H4R6;H0YIV4;F5HFY4;A8MZ22;P55209 E9PNW0 84 94 NAP1L4;NAP1L1;NAP1L4b Nucleosome assembly protein 1-like 4;Nucleosome assembly protein 1-like 1 yes no 3 0.0014174 86.014 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 8262200 579780 1400800 1421100 660880 1419400 2780100 2489 51 2518 11063;11064;11065;11066;11067;11068 7318;7319;7320;7321 7318 4 FYFYERAK IRAYPTVKFYFYERAK FYFYERAKRNFQEEQI K F Y A K R 1 1 0 0 0 0 1 0 0 0 0 1 0 2 0 0 0 0 2 0 0 8 1 1122.5498 Q8IXB1;Q8IXB1-2;F8W884 Q8IXB1 748 755 DNAJC10 DnaJ homolog subfamily C member 10 yes no 2 0.037817 88.177 By MS/MS By matching By matching By matching By matching By matching 1 1619600 1619600 0 0 0 0 0 2490 1287 2519 11069 7322 7322 1 FYGELALKK KIGELFSKFYGELALK YGELALKKKIPDTVLE K F Y K K K 1 0 0 0 0 0 1 1 0 0 2 2 0 1 0 0 0 0 1 0 0 9 1 1067.6015 P78527;E7EUY0;P78527-2;F5GX40 P78527 156 164 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 2.1447E-11 123.21 By matching By matching By matching By matching By matching By MS/MS 1 1 1 7334100 0 370690 431960 0 0 6531400 2491 1012 2520 11070;11071;11072 7323 7323 1 FYGYDNVK GILIHLAKFYGYDNVK FYGYDNVKEYLESLQK K F Y V K E 0 0 1 1 0 0 0 1 0 0 0 1 0 1 0 0 0 0 2 1 0 8 0 1004.4603 C9K0Y1;Q96GN5-4;Q96GN5-2;Q96GN5 C9K0Y1 387 394 CDCA7L Cell division cycle-associated 7-like protein yes no 2 0.0074467 97.635 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 17401000 300380 0 3738400 0 590570 12772000 2492 280 2521 11073;11074;11075;11076 7324 7324 1 FYQASTSELYGK CGLINSVKFYQASTSE STSELYGKVQEIPQKE K F Y G K V 1 0 0 0 0 1 1 1 0 0 1 1 0 1 0 2 1 0 2 0 0 12 0 1392.6561 E9PI88;O60547 E9PI88 120 131 GMDS GDP-mannose 4,6 dehydratase yes no 2 0.00065502 93.766 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 8602700 942490 1495500 0 0 2089700 4075000 2493 444 2522 11077;11078;11079;11080 7325;7326;7327;7328;7329;7330 7327 6 FYWQHCETSSLEEVK F Y V K 0 0 0 0 1 1 3 0 1 0 1 1 0 1 0 2 1 1 1 1 0 15 0 1941.8567 REV__A6PVH5 yes no 2 0.0026064 58.885 By matching By MS/MS By matching By matching By matching By matching 2 1 92799000 0 90543000 0 2256000 0 0 + 2494 1665 2523 11081;11082;11083 7331 7331 1 GAADVEKVEEK EPMETEPKGAADVEKV DVEKVEEKSAIDLTPI K G A E K S 2 0 0 1 0 0 3 1 0 0 0 2 0 0 0 0 0 0 0 2 0 11 1 1173.5877 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1611 1621 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 0.00016048 100.93 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1072700 0 0 662930 0 0 409790 2495 486 2524 11084;11085 7332;7333 7332 2 GAAEGSGGDGEGPPGEAGAEK ATPGSEPKGAAEGSGG PGEAGAEKSSSAVAPQ K G A E K S 4 0 0 1 0 0 4 8 0 0 0 1 0 0 2 1 0 0 0 0 0 21 0 1798.7606 E7EQ07;P31277 E7EQ07 57 77 HOXD11 Homeobox protein Hox-D11 yes no 2 0.020361 35.875 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 5511900 0 1240300 796100 478950 664790 2331800 2496 360 2525 11086;11087;11088;11089;11090 7334;7335 7334 2 GAAPPPPPVPR RGVPVRGRGAAPPPPP PPPPPVPRGRGVGPPR R G A P R G 2 1 0 0 0 0 0 1 0 0 0 0 0 0 6 0 0 0 0 1 0 11 0 1054.5924 Q07666;Q07666-3;Q07666-2;E7ET98 Q07666 292 302 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 2 0.025855 52.725 By matching By MS/MS By matching By matching By matching By matching 1 1077900 0 1077900 0 0 0 0 2497 1045 2526 11091 7336 7336 1 GAAVNGPVSHSSLTK SENFILPKGAAVNGPV VSHSSLTKTSNMNKGS K G A T K T 2 0 1 0 0 0 0 2 1 0 1 1 0 0 1 3 1 0 0 2 0 15 0 1423.7419 Q9H582-2;Q9H582;F5H7T9 Q9H582-2 113 127 ZNF644 Zinc finger protein 644 yes no 2;3 7.8168E-14 105.58 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 2 24657000 623690 5097900 4717000 1826000 4296800 8095500 2498 1492 2527 11092;11093;11094;11095;11096;11097;11098;11099 7337;7338;7339;7340;7341;7342 7340 5 GACLLPKIETMR ECCQAEDKGACLLPKI LPKIETMREKVLASSA K G A M R E 1 1 0 0 1 0 1 1 0 1 2 1 1 0 1 0 1 0 0 0 0 12 1 1387.7316 CON__P02769 CON__P02769 198 209 yes yes 2;3 0.0090035 69.815 By matching By MS/MS By matching By matching By matching By matching 2 11644000 0 11644000 0 0 0 0 + 2499 294 2528 11100;11101 7343;7344 7344 2 GACLLPKIETMREK ECCQAEDKGACLLPKI KIETMREKVLASSARQ K G A E K V 1 1 0 0 1 0 2 1 0 1 2 2 1 0 1 0 1 0 0 0 0 14 2 1644.8691 CON__P02769 CON__P02769 198 211 yes yes 3;4 0.00017381 76.073 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 2 3 2 20449000 0 3225300 3923200 6661200 0 6638800 + 2500 294 2529;2530 11102;11103;11104;11105;11106;11107;11108;11109;11110;11111 7345;7346;7347;7348;7349;7350 7346 24 5 GADSELSTVPSVTK QKLNGISKGADSELST STVPSVTKTQASSSFQ K G A T K T 1 0 0 1 0 0 1 1 0 0 1 1 0 0 1 3 2 0 0 2 0 14 0 1389.6987 P46087;Q3KQS4;P46087-2 P46087 656 669 NOP2 Putative ribosomal RNA methyltransferase NOP2 yes no 2 0.0016293 68.168 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 11312000 2494100 1493800 0 267470 5071200 1985700 2501 923 2531 11112;11113;11114;11115;11116 7351;7352 7351 2 GADTSSADRQTRLEGAEINK IDLAGNERGADTSSAD LEGAEINKSLLALKEC R G A N K S 3 2 1 2 0 1 2 2 0 1 1 1 0 0 0 2 2 0 0 0 0 20 2 2118.0301 O00139-1;E9PB70;O00139;O00139-4;O00139-2 O00139-2 437 456 KIF2A Kinesin-like protein KIF2A no no 3 0.03355 40.798 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2980800 649260 442460 0 0 810800 1078300 2502 403;686 2532 11117;11118;11119;11120 7353 7353 1 GAEAANVTGPGGVPVQGSK FDVVEGEKGAEAANVT GVPVQGSKYAADRNHY K G A S K Y 3 0 1 0 0 1 1 5 0 0 0 1 0 0 2 1 1 0 0 3 0 19 0 1694.8588 E7ETA0;P67809;H0Y449 E7ETA0 115 133 YBX1 Nuclease-sensitive element-binding protein 1 yes no 2 0.013404 39.905 By matching By matching By matching By matching By MS/MS By matching 1 1 1 5358700 0 909350 0 0 2633300 1816000 2503 380 2533 11121;11122;11123 7354 7354 1 GAFSSVSMSGGAGR AIVGGGKRGAFSSVSM SMSGGAGRCSSGGFGS R G A G R C 2 1 0 0 0 0 0 4 0 0 0 0 1 1 0 4 0 0 0 1 0 14 0 1269.5772 F8VS64;P19013;CON__P19013;F5H8K9;F8VX05;F8VZR6 F8VS64 28 41 KRT4 Keratin, type II cytoskeletal 4 yes no 2 0.011818 49.62 By matching By matching By matching By matching By MS/MS By matching 1 1620700 0 0 0 0 1620700 0 + 2504 300 2534 11124 7355 7355 1 GAGIEIYPGSQCTLSDNGIHHCK NSDLYGAKGAGIEIYP DNGIHHCKEGILIKDF K G A C K E 1 0 1 1 2 1 1 4 2 3 1 1 0 0 1 2 1 0 1 0 0 23 0 2513.1427 Q8NEM2 Q8NEM2 489 511 SHCBP1 SHC SH2 domain-binding protein 1 yes yes 4 0.00034569 55.337 By matching By matching By matching By matching By matching By MS/MS 1 1760000 0 0 0 0 0 1760000 2505 1323 2535 11125 7356;7357 7357 2 GAGLGFSTAPNK AMSWKYSRGAGLGFST GFSTAPNKIFYIDRNA R G A N K I 2 0 1 0 0 0 0 3 0 0 1 1 0 1 1 1 1 0 0 0 0 12 0 1118.572 Q1ED39;H3BNU8 Q1ED39 431 442 KNOP1 Lysine-rich nucleolar protein 1 yes no 2 0.0030011 72.29 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 19402000 2015300 1915200 2331800 2028400 5521900 5589900 2506 1157 2536 11126;11127;11128;11129;11130;11131 7358;7359;7360 7359 3 GALMLENLQK SALVKRLKGALMLENL LMLENLQKHSTPHAAF K G A Q K H 1 0 1 0 0 1 1 1 0 0 3 1 1 0 0 0 0 0 0 0 0 10 0 1115.6009 E7EQT4;Q9UKV3;Q9UKV3-5 E7EQT4 104 113 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.0087327 79.489 By matching By matching By matching By matching By matching By MS/MS 1 9147300 0 0 0 0 0 9147300 2507 364 2537 11132 7361 7361 1 GALQNIIPASTGAAK GKLWRDGRGALQNIIP PASTGAAKAVGKVIPE R G A A K A 4 0 1 0 0 1 0 2 0 2 1 1 0 0 1 1 1 0 0 0 0 15 0 1410.7831 P04406;E7EUT5;E7EUT4 P04406 201 215 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 0.0005823 73.386 By matching By matching By matching By matching By MS/MS By matching 1 1 4393300 0 0 2308200 0 2085100 0 2508 791 2538 11133;11134 7362 7362 1 GALRGYVCAIKVEK NFLEVHDKGALRGYVC VCAIKVEKFCCAVFAK K G A E K F 2 1 0 0 1 0 1 2 0 1 1 2 0 0 0 0 0 0 1 2 0 14 2 1562.8603 Q08AF3;Q08AF3-2;B4E128 Q08AF3 287 300 SLFN5 Schlafen family member 5 yes no 3 0.018932 54.898 By MS/MS By matching By matching By matching By matching By matching 1 1438900 1438900 0 0 0 0 0 2509 1049 2539 11135 7363 7363 1 GALYCELCYEK YIGFVEEKGALYCELC YCELCYEKFFAPECGR K G A E K F 1 0 0 0 2 0 2 1 0 0 2 1 0 0 0 0 0 0 2 0 0 11 0 1404.6054 H0Y8Y3;F5H7Y0;E9PBF5;Q96HC4-4;Q96HC4;D6RB78 H0Y8Y3 206 216 PDLIM5 PDZ and LIM domain protein 5 yes no 2 0.021563 54.772 By matching By MS/MS By matching By matching By matching By matching 1 2279200 0 2279200 0 0 0 0 2510 405 2540 11136 7364 7364 1 GANRTETVTSFRK GAYMLMYKGANRTETV ETVTSFRKRESKVPAD K G A R K R 1 2 1 0 0 0 1 1 0 0 0 1 0 1 0 1 3 0 0 1 0 13 2 1465.7637 P78527;E7EUY0;P78527-2 P78527 3861 3873 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 0.0053811 81.185 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 124070000 10045000 14498000 10397000 9307000 31438000 48383000 2511 1012 2541 11137;11138;11139;11140;11141;11142;11143 7365;7366;7367;7368;7369 7367 5 GAPAAATAPAPTAHKAK LEGGGERRGAPAAATA APTAHKAKKAAPGAAG R G A A K K 8 0 0 0 0 0 0 1 1 0 0 2 0 0 3 0 2 0 0 0 0 17 1 1529.8314 Q92522 Q92522 129 145 H1FX Histone H1x yes yes 3 0.0039058 49.595 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 2395600 575510 363570 0 0 906030 550490 2512 1350 2542 11144;11145;11146;11147 7370 7370 1 GAPATPHLADAPK EPPPAASKGAPATPHL PHLADAPKEAEKKVVI K G A P K E 4 0 0 1 0 0 0 1 1 0 1 1 0 0 3 0 1 0 0 0 0 13 0 1244.6513 Q99958 Q99958 193 205 FOXC2 Forkhead box protein C2 yes yes 2;3 1.5228E-47 130.56 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 10486000 1464700 1767600 2152800 681180 2156800 2262700 2513 1434 2543 11148;11149;11150;11151;11152;11153;11154 7371;7372;7373;7374;7375;7376;7377;7378;7379 7373 9 GAPATPHLADAPKEAEK EPPPAASKGAPATPHL DAPKEAEKKVVIKSEA K G A E K K 5 0 0 1 0 0 2 1 1 0 1 2 0 0 3 0 1 0 0 0 0 17 1 1701.8686 Q99958 Q99958 193 209 FOXC2 Forkhead box protein C2 yes yes 3;4 0.00076571 72.662 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 2 1 34023000 10151000 2310700 6267200 7028400 5430400 2835900 2514 1434 2544 11155;11156;11157;11158;11159;11160;11161;11162;11163;11164 7380;7381;7382;7383;7384;7385;7386;7387 7384 8 GAPLAQELCSESKPPGYTGPVTR LRTSGLARGAPLAQEL GYTGPVTRTMARRLSG R G A T R T 2 1 0 0 1 1 2 3 0 0 2 1 0 0 4 2 2 0 1 1 0 23 1 2414.19 H9KV46;Q86Y91 H9KV46 575 597 KIF18B Kinesin-like protein KIF18B yes no 3 2.4026E-08 72.864 By matching By MS/MS By matching By matching By matching By matching 1 6580700 0 6580700 0 0 0 0 2515 675 2545 11165 7388 7388 1 GAQQIHSIRQHSSTGPPPLLLAPR VVMPPLVRGAQQIHSI PPLLLAPRASVPSVQI R G A P R A 2 2 0 0 0 3 0 2 2 2 3 0 0 0 4 3 1 0 0 0 0 24 1 2560.3986 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7 Q86YP4 250 273 GATAD2A Transcriptional repressor p66-alpha yes no 4 0.029653 32.227 By matching By matching By matching By matching By matching By MS/MS 1 3363400 0 0 0 0 0 3363400 2516 170 2546 11166 7389 7389 1 GASEISDSCKPLKK TVKTGLQKGASEISDS DSCKPLKKRSRASTDV K G A K K R 1 0 0 1 1 0 1 1 0 1 1 3 0 0 1 3 0 0 0 0 0 14 2 1518.7712 Q9BZ95-4;C9JY66;Q9BZ95-2;B7ZL11;Q9BZ95 Q9BZ95-4 556 569 WHSC1L1 Histone-lysine N-methyltransferase NSD3 yes no 3 0.02161 53.448 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 8072800 737940 1446600 1702000 914400 859620 2412300 2517 210 2547 11167;11168;11169;11170;11171;11172 7390 7390 1 GASFVTSTNPRK GQVTSPVKGASFVTST VTSTNPRKFSGFSAKP K G A R K F 1 1 1 0 0 0 0 1 0 0 0 1 0 1 1 2 2 0 0 1 0 12 1 1263.6571 P49916-2;P49916 P49916-2 214 225 LIG3 DNA ligase 3 yes no 3 0.025874 41.48 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1524000 526510 0 0 371660 0 625850 2518 947 2548 11173;11174;11175 7391 7391 1 GASGSFVVVQK VIKQVKGKGASGSFVV GSFVVVQKSRKTPQKS K G A Q K S 1 0 0 0 0 1 0 2 0 0 0 1 0 1 0 2 0 0 0 3 0 11 0 1077.5819 Q5SSJ5;Q5SWC8;Q5SSJ5-3;Q5SSJ5-2 Q5SSJ5 223 233 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 2 0.016471 58.172 By matching By matching By matching By matching By MS/MS By matching 1 1 1 4729000 877010 0 0 0 2815800 1036200 2519 1186 2549 11176;11177;11178 7392 7392 1 GASSPYGAPGTPR NPMTPVHKGASSPYGA YGAPGTPRMNLSSNLG K G A P R M 2 1 0 0 0 0 0 3 0 0 0 0 0 0 3 2 1 0 1 0 0 13 0 1216.5836 Q5UIP0-2;Q5UIP0;H7BZN3 Q5UIP0-2 399 411 RIF1 Telomere-associated protein RIF1 yes no 2 0.0022782 65.295 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4753600 0 886910 416010 0 0 3450600 2520 1201 2550 11179;11180;11181 7393 7393 1 GATGEPEVMEPALEGTGK APAGEQLRGATGEPEV PALEGTGKEGKKASSR R G A G K E 2 0 0 0 0 0 4 4 0 0 1 1 1 0 2 0 2 0 0 1 0 18 0 1771.8298 Q9H6R4-4;Q9H6R4;Q9H6R4-2;G8JLK7;Q9H6R4-3 Q9H6R4-4 12 29 NOL6 Nucleolar protein 6 yes no 2 0.00049115 81.606 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 23297000 6550600 1766200 6596400 0 1988400 6395900 2521 1497 2551 11182;11183;11184;11185;11186 7394;7395;7396 7394 3 GATSAEPGSSNHTNMGNLAVLSQGNTSSSR TCGEVIVKGATSAEPG QGNTSSSRRKTKSKSI K G A S R R 3 1 4 0 0 1 1 4 1 0 2 0 1 0 1 7 3 0 0 1 0 30 0 2931.3377 A6NF48;Q9Y2X9;F5H1Z5 A6NF48 338 367 ZNF281 Zinc finger protein 281 yes no 3 0.0026184 33.776 By matching By matching By matching By matching By matching By MS/MS 1 929790 0 0 0 0 0 929790 2522 19 2552 11187 7397 7397 1 GATYGKPVHHGVNQLK GRKRPVPKGATYGKPV HHGVNQLKFARSLQSV K G A L K F 1 0 1 0 0 1 0 3 2 0 1 2 0 0 1 0 1 0 1 2 0 16 1 1704.906 E7EX53;Q642I1;E7EQV9;P61313;E7ENU7 E7EX53 78 93 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 3;4 0.00013652 86.738 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 2 6741000 0 2248700 0 0 1386900 3105400 2523 365 2553 11188;11189;11190;11191;11192 7398;7399;7400 7398 3 GAVAIADAIRGGLPK GDCLVRSKGAVAIADA AIRGGLPKLKELNLSF K G A P K L 4 1 0 1 0 0 0 3 0 2 1 1 0 0 1 0 0 0 0 1 0 15 1 1407.8198 P46060;F8W7I9;H0Y4Q3 P46060 280 294 RANGAP1 Ran GTPase-activating protein 1 yes no 3 0.00070259 80.371 By matching By MS/MS By matching By matching By matching By matching 1 5061400 0 5061400 0 0 0 0 2524 921 2554 11193 7401 7401 1 GAVEAELDPVEYTLRK MAENREPRGAVEAELD PVEYTLRKRLPSRLPR R G A R K R 2 1 0 1 0 0 3 1 0 0 2 1 0 0 1 0 1 0 1 2 0 16 1 1788.9258 C9JYM0;O75817 C9JYM0 9 24 POP7 Ribonuclease P protein subunit p20 yes no 2 6.6057E-09 91.657 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 2525 273 2555 11194 7402 7402 1 GAVEDVISRNEIQGR TVINNLKKGAVEDVIS SRNEIQGRSAEEAYKQ K G A G R S 1 2 1 1 0 1 2 2 0 2 0 0 0 0 0 1 0 0 0 2 0 15 1 1641.8434 O15226;G3V1N1 O15226 525 539 NKRF NF-kappa-B-repressing factor yes no 3 0.0046666 53.869 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 6281900 359360 2081200 2663400 1177900 0 0 2526 578 2556 11195;11196;11197;11198 7403;7404 7404 2 GAVIVVSHDAR GEAINEYKGAVIVVSH IVVSHDARLITETNCQ K G A A R L 2 1 0 1 0 0 0 1 1 1 0 0 0 0 0 1 0 0 0 3 0 11 0 1122.6146 E9PC67;F8VQZ0;Q8NE71;Q8NE71-2;H0YGW7;Q5STZ7 Q8NE71 790 800 ABCF1 ATP-binding cassette sub-family F member 1 no no 2 0.0057989 71.03 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 527470 0 0 0 0 527470 0 2527 1321;411 2557 11199;11200 7405;7406 7405 2 GAVLAQGQGDGTVSK GPMGEAEKGAVLAQGQ QGDGTVSKGGRGPGSQ K G A S K G 2 0 0 1 0 2 0 4 0 0 1 1 0 0 0 1 1 0 0 2 0 15 0 1386.7103 F8W689;P48382;B7Z848 F8W689 527 541 RFX5 DNA-binding protein RFX5 yes no 2 0.00066963 80.746 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 6024100 0 981930 1051300 639830 1265200 2085800 2528 553 2558 11201;11202;11203;11204;11205 7407;7408;7409;7410 7410 4 GAVQTGVDTAK TGAANVAKGAVQTGVD QTGVDTAKTVLTGTKD K G A A K T 2 0 0 1 0 1 0 2 0 0 0 1 0 0 0 0 2 0 0 2 0 11 0 1045.5404 Q96Q06-2;Q96Q06 Q96Q06-2 567 577 PLIN4 Perilipin-4 yes no 2 4.1671E-08 110.93 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 39814000 3592300 7984500 15344000 2053600 2362100 8478300 2529 1413 2559 11206;11207;11208;11209;11210;11211 7411;7412;7413;7414;7415 7414 5 GAVTDDEVIRK ________________ TDDEVIRKRLLIDGDG M G A R K R 1 1 0 2 0 0 1 1 0 1 0 1 0 0 0 0 1 0 0 2 0 11 1 1201.6303 Q6I9Y2 Q6I9Y2 2 12 THOC7 THO complex subunit 7 homolog yes yes 2 0.00010273 100.69 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 26798000 2660400 3192600 4312100 3553400 6837900 6241600 2530 1221 2560 11212;11213;11214;11215;11216;11217 7416;7417;7418 7416 3 GAVVPPVHDIYR DSDEDEEKGAVVPPVH PPVHDIYRARQQKRIR K G A Y R A 1 1 0 1 0 0 0 1 1 1 0 0 0 0 2 0 0 0 1 3 0 12 0 1321.7143 Q12996;H0YE74;F5H0G6 Q12996 698 709 CSTF3 Cleavage stimulation factor subunit 3 yes no 3 0.038221 58.172 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 2531 1067 2561 11218 7419 7419 1 GAWSNVLR EGGKAFFKGAWSNVLR GAWSNVLRGMGGAFVL K G A L R G 1 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 1 0 8 0 901.477 P12236;P12235;P05141 P05141 273 280 SLC25A6;SLC25A4;SLC25A5 ADP/ATP translocase 3;ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 2 0.01958 80.229 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 4018500 2045300 0 0 0 1973200 0 2532 795;826 2562 11219;11220 7420;7421 7420 2 GCAQRAADAAGPGCPR PCGHSLCRGCAQRAAD AAGPGCPRCRARGPGW R G C P R C 5 2 0 1 2 1 0 3 0 0 0 0 0 0 2 0 0 0 0 0 0 16 1 1613.7151 Q8NCN4 Q8NCN4 90 105 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 3 0.0022477 57.973 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1795700 304690 502570 0 0 398090 590390 2533 1318 2563 11221;11222;11223;11224 7422 7422 1 GCCFVTFYTRK SQNPPQSKGCCFVTFY FVTFYTRKAALEAQNA K G C R K A 0 1 0 0 2 0 0 1 0 0 0 1 0 2 0 0 2 0 1 1 0 11 1 1437.6533 Q92879-2;Q92879-3;F8W940;Q92879;Q92879-4;G5EA30;E9PQK4;E9PSH0;E9PKU1;F5H4Y5;F5H0D8;O95319-5;O95319-2;Q5VZZ6;O95319;O95319-4;O95319-3;E9PC62 Q92879-2 60 70 CELF1;CELF2 CUGBP Elav-like family member 1;CUGBP Elav-like family member 2 yes no 3 0.0077284 59.198 By matching By matching By matching By matching By matching By MS/MS 1 1 4456100 0 0 0 1051100 0 3405000 2534 560 2564 11225;11226 7423 7423 1 GCPVNTEPSGPTCEK PMHEGKMKGCPVNTEP PSGPTCEKKTYSVPAH K G C E K K 0 0 1 0 2 0 2 2 0 0 0 1 0 0 3 1 2 0 0 1 0 15 0 1631.692 P53701 P53701 34 48 HCCS Cytochrome c-type heme lyase yes yes 2 0.0025899 62.357 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 7321200 907960 1141600 1146200 798610 1864100 1462800 2535 963 2565 11227;11228;11229;11230;11231;11232 7424;7425 7425 2 GCPVNTEPSGPTCEKK PMHEGKMKGCPVNTEP SGPTCEKKTYSVPAHQ K G C K K T 0 0 1 0 2 0 2 2 0 0 0 2 0 0 3 1 2 0 0 1 0 16 1 1759.7869 P53701 P53701 34 49 HCCS Cytochrome c-type heme lyase yes yes 3 0.001007 59.709 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 5070300 460230 438770 548070 481290 1394300 1747600 2536 963 2566 11233;11234;11235;11236;11237;11238 7426 7426 1 GCQAEADRAEVSRFAK ALRTLITKGCQAEADR AEVSRFAKNFLPILFN K G C A K N 4 2 0 1 1 1 2 1 0 0 0 1 0 1 0 1 0 0 0 1 0 16 2 1793.8479 Q5JTH9-2;E9PCK7;Q5JTH9;F5H456 Q5JTH9-2 572 587 RRP12 RRP12-like protein yes no 3 0.010518 53.377 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 10953000 903410 911860 1289100 1166600 3170400 3512000 2537 414 2567 11239;11240;11241;11242;11243;11244 7427 7427 1 GCTATLGNFAK DDCYTSARGCTATLGN ATLGNFAKATFDAISK R G C A K A 2 0 1 0 1 0 0 2 0 0 1 1 0 1 0 0 2 0 0 0 0 11 0 1138.5441 P15880;H0YEN5;E9PQD7 P15880 228 238 RPS2 40S ribosomal protein S2 yes no 2 0.030492 69.721 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 26253000 2002600 2418200 1501300 1646800 7969300 10714000 2538 839 2568 11245;11246;11247;11248;11249;11250 7428;7429 7429 1 GCTIVKPFNLSQGK SSPARVTKGCTIVKPF PFNLSQGKKRTFDETV K G C G K K 0 0 1 0 1 1 0 2 0 1 1 2 0 1 1 1 1 0 0 1 0 14 1 1547.813 Q9ULW0;Q96RR5 Q9ULW0 300 313 TPX2;HCA90 Targeting protein for Xklp2 yes no 2;3 6.2854E-124 150.49 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 1 1 2 65534000 0 13453000 26004000 5978200 1117400 18982000 2539 1611 2569 11251;11252;11253;11254;11255;11256;11257;11258 7430;7431;7432;7433;7434;7435 7433 6 GCTIVKPFNLSQGKK SSPARVTKGCTIVKPF FNLSQGKKRTFDETVS K G C K K R 0 0 1 0 1 1 0 2 0 1 1 3 0 1 1 1 1 0 0 1 0 15 2 1675.908 Q9ULW0;Q96RR5 Q9ULW0 300 314 TPX2;HCA90 Targeting protein for Xklp2 yes no 3;4 6.4672E-104 143.58 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 170970000 16215000 26166000 24499000 11553000 28542000 64000000 2540 1611 2570 11259;11260;11261;11262;11263;11264;11265;11266;11267;11268;11269;11270 7436;7437;7438;7439;7440;7441;7442;7443;7444;7445 7440 10 GDEVDGVDEVAK VKSEGKRKGDEVDGVD DGVDEVAKKKSKKEKD K G D A K K 1 0 0 3 0 0 2 2 0 0 0 1 0 0 0 0 0 0 0 3 0 12 0 1231.5568 P09874;F8WC10 P09874 210 221 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2 0.0040679 66.023 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 5766800 515500 941380 963650 802290 1426400 1117600 2541 815 2571 11271;11272;11273;11274;11275;11276 7446;7447 7447 2 GDHEEFNQCQTQLK HARIALEKGDHEEFNQ NQCQTQLKSLYAENLP K G D L K S 0 0 1 1 1 3 2 1 1 0 1 1 0 1 0 0 1 0 0 0 0 14 0 1732.7475 Q96PV6;Q96PV6-2;F8W9Q9;E7EQP8 Q96PV6 598 611 LENG8 Leukocyte receptor cluster member 8 yes no 3 8.2985E-08 97.273 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 10629000 635270 1597000 1364800 747870 2201400 4082800 2542 362 2572 11277;11278;11279;11280;11281;11282 7448;7449;7450 7448 3 GDIVDIKGMGTVQK TYMRIYKKGDIVDIKG KGMGTVQKGMPHKCYH K G D Q K G 0 0 0 2 0 1 0 3 0 2 0 2 1 0 0 0 1 0 0 2 0 14 1 1459.7705 G3V1B3;P46778 G3V1B3 37 50 RPL21 60S ribosomal protein L21 yes no 3 0.024058 43.761 By MS/MS By matching By matching By matching By matching By matching 1 2601000 2601000 0 0 0 0 0 2543 574 2573 11283 7451 7451 1 GDLPREPLVATNLPGRGQLQK AKKVHTSKGDLPREPL PGRGQLQKLASERNLF K G D Q K L 1 2 1 1 0 2 1 3 0 0 4 1 0 0 3 0 1 0 0 1 0 21 2 2258.2495 P42166 P42166 249 269 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 3;4 0 189.56 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 3 1 1363100000 148670000 654000000 82163000 348940000 28205000 101130000 2544 913 2574 11284;11285;11286;11287;11288;11289;11290;11291;11292;11293;11294 7452;7453;7454;7455;7456;7457;7458;7459;7460;7461 7458 10 GDRQRFYSDSHHLK DRPFNRGKGDRQRFYS YSDSHHLKRERHEKEW K G D L K R 0 2 0 2 0 1 0 1 2 0 1 1 0 1 0 2 0 0 1 0 0 14 2 1744.8394 Q92576-2;Q92576 Q92576-2 1830 1843 PHF3 PHD finger protein 3 yes no 4 0.017654 45.357 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 8458900 0 0 2034200 1600000 1229600 3595100 2545 1353 2575 11295;11296;11297;11298 7462 7462 1 GDSIQNEKNPNPIESLEK SGHENKTKGDSIQNEK NPIESLEKESAFKTKA K G D E K E 0 0 3 1 0 1 3 1 0 2 1 2 0 0 2 2 0 0 0 0 0 18 1 2010.9858 E9PFZ0;P38398-4;P38398-2;P38398;E9PFC7;E7EP70;F8W8H7;E7EMP0;E9PH68;E7EWN5 E9PFZ0 512 529 BRCA1 Breast cancer type 1 susceptibility protein yes no 3 0.0034301 49.924 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 15527000 4695900 2044400 4720900 742280 563690 2760000 2546 426 2576 11299;11300;11301;11302;11303;11304 7463;7464 7464 2 GDSLSLKGETVNDCHAEIISR GTGNRCVKGDSLSLKG CHAEIISRRGFIRFLY K G D S R R 1 1 1 2 1 0 2 2 1 2 2 1 0 0 0 3 1 0 0 1 0 21 1 2300.1067 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 896 916 ADAR Double-stranded RNA-specific adenosine deaminase no no 3;4 0.014282 38.996 By MS/MS By matching By matching By matching By matching By MS/MS 1 2 9888700 3578700 0 0 0 0 6310000 2547 352;968 2577 11305;11306;11307 7465;7466 7465 2 GDSNANSDVCAAALR MAPPSHRKGDSNANSD DVCAAALRGLSRTILM K G D L R G 4 1 2 2 1 0 0 1 0 0 1 0 0 0 0 2 0 0 0 1 0 15 0 1519.6685 E7EV54;Q8IZL8;I3L3A8;C9JFV4;Q8IZL8-2 E7EV54 366 380 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 2 0.018838 64.52 By matching By matching By matching By matching By MS/MS By matching 1 0 0 0 0 0 0 0 2548 242 2578 11308 7467 7467 1 GDSNANSDVCAAALRGLSR MAPPSHRKGDSNANSD AALRGLSRTILMCGPL K G D S R T 4 2 2 2 1 0 0 2 0 0 2 0 0 0 0 3 0 0 0 1 0 19 1 1932.9072 E7EV54;Q8IZL8;I3L3A8;C9JFV4;Q8IZL8-2 E7EV54 366 384 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 3 0.0050877 46.249 By matching By MS/MS By matching By matching By matching By matching 1 1 5479600 0 2028600 0 0 0 3451000 2549 242 2579 11309;11310 7468 7468 1 GEAAAERPGEAAVASSPSK QFSKTAAKGEAAAERP AVASSPSKANGQENGH K G E S K A 6 1 0 0 0 0 3 2 0 0 0 1 0 0 2 3 0 0 0 1 0 19 1 1783.8701 P29966 P29966 12 30 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 0.015117 39.364 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3796300 0 955360 0 0 642250 2198700 2550 886 2580 11311;11312;11313 7469 7469 1 GEAGNSDSMCLR LMQNQKGKGEAGNSDS NSDSMCLRSRKTKSQP K G E L R S 1 1 1 1 1 0 1 2 0 0 1 0 1 0 0 2 0 0 0 0 0 12 0 1295.5234 P46013;F5H4V4;P46013-2 P46013 3190 3201 MKI67 Antigen KI-67 no no 2 2.9068E-18 116.03 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 24453000 1542000 3256000 3925800 0 4731500 10998000 2551 919;920 2581 11314;11315;11316;11317;11318 7470;7471;7472;7473;7474;7475 7473 6 GEALYGYCNLKDK EVCLLYNKGEALYGYC GYCNLKDKCNKFHVCK K G E D K C 1 0 1 1 1 0 1 2 0 0 2 2 0 0 0 0 0 0 2 0 0 13 1 1529.7184 Q96H79 Q96H79 175 187 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 3 0.0043885 62.338 By matching By MS/MS By matching By matching By matching By matching 1 1280500 0 1280500 0 0 0 0 2552 1390 2582 11319 7476 7476 1 GEANGCPGLEPLRQK PKRRPEPRGEANGCPG GLEPLRQKLAALQGAH R G E Q K L 1 1 1 0 1 1 2 3 0 0 2 1 0 0 2 0 0 0 0 0 0 15 1 1624.7991 P0CW18 P0CW18 468 482 PRSS56 Serine protease 56 yes yes 3 0.00077679 76.01 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2619100 0 0 553680 299280 0 1766200 2553 817 2583 11320;11321;11322 7477 7477 1 GEATVSFDDPPSAK DKDTGKPKGEATVSFD FDDPPSAKAAIDWFDG K G E A K A 2 0 0 2 0 0 1 1 0 0 0 1 0 1 2 2 1 0 0 1 0 14 0 1419.6518 F5GWQ7;B4DR70;P35637-2;P35637;H3BPE7;Q92804-2;Q92804 F5GWQ7 87 100 FUS;TAF15 RNA-binding protein FUS;TATA-binding protein-associated factor 2N yes no 2 0.0026818 66.215 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 5092900 1655500 0 0 0 1422600 2014800 2554 120 2584 11323;11324;11325;11326 7478;7479;7480;7481 7481 4 GEAVCPTCNVVTRK WQRAIHERGEAVCPTC TCNVVTRKTLVGLKKH R G E R K T 1 1 1 0 2 0 1 1 0 0 0 1 0 0 1 0 2 0 0 3 0 14 1 1589.7654 Q96KM6 Q96KM6 508 521 ZNF512B Zinc finger protein 512B yes yes 3 0.00083377 68.277 By MS/MS By MS/MS By matching By matching By matching By matching 2 1 1 1 2 12325000 1789000 2015800 0 881230 2000900 5638300 2555 1402 2585 11327;11328;11329;11330;11331;11332;11333 7482;7483 7482 2 GEAVLRPGLDAEPELSPEEQR SGEGAGSKGEAVLRPG ELSPEEQRVLERKLKK K G E Q R V 2 2 0 1 0 1 5 2 0 0 3 0 0 0 3 1 0 0 0 1 0 21 1 2291.1394 C9JQV0;Q9BRJ6 C9JQV0 44 64 C7orf50 Uncharacterized protein C7orf50 yes no 3 0.034242 45.069 By matching By MS/MS By matching By matching By matching By matching 1 2627800 0 2627800 0 0 0 0 2556 266 2586 11334 7484 7484 0 GEEGHDPKEPEQLRK SGRRRRRRGEEGHDPK KEPEQLRKLFIGGLSF R G E R K L 0 1 0 1 0 1 4 2 1 0 1 2 0 0 2 0 0 0 0 0 0 15 2 1747.8489 P51991 P51991 22 36 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes yes 4 0.003718 54.951 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 12970000 1538100 1599300 1730300 1329800 2770000 4002800 2557 955 2587 11335;11336;11337;11338;11339;11340 7485 7485 1 GEFGGFGSVSGK ASHYDSEKGEFGGFGS GFGSVSGKIEIEIKIN K G E G K I 0 0 0 0 0 0 1 5 0 0 0 1 0 2 0 2 0 0 0 1 0 12 0 1127.5247 Q09028-3;Q09028;Q09028-2;Q09028-4;C9JPP3 Q09028-3 103 114 RBBP4 Histone-binding protein RBBP4 yes no 2 0.0018256 82.774 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 37013000 0 12148000 0 0 0 24865000 2558 1051 2588 11341;11342 7486;7487;7488 7487 3 GEFGGFGSVTGK ASHCDSDKGEFGGFGS GFGSVTGKIECEIKIN K G E G K I 0 0 0 0 0 0 1 5 0 0 0 1 0 2 0 1 1 0 0 1 0 12 0 1141.5404 Q16576;Q16576-2;Q5JP01 Q16576 102 113 RBBP7 Histone-binding protein RBBP7 yes no 2 0.013255 56.295 By matching By MS/MS By matching By matching By matching By matching 1 1 23998000 0 9314600 0 0 0 14683000 2559 1153 2589 11343;11344 7489;7490 7489 2 GEFSASPMLK RSPIRQDRGEFSASPM FSASPMLKSGMSPEQS R G E L K S 1 0 0 0 0 0 1 1 0 0 1 1 1 1 1 2 0 0 0 0 0 10 0 1065.5165 Q9UQ35;F5GWZ7;Q9UQ35-2;I3L2L6 Q9UQ35 1119 1128 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.0027701 97.597 By matching By matching By matching By matching By matching By MS/MS 1 1 1 6514900 967680 1500900 0 0 0 4046300 2560 1623 2590 11345;11346;11347 7491;7492 7492 2 GEGIRTPLEK ATPAPSEKGEGIRTPL GIRTPLEKEEAENQEE K G E E K E 0 1 0 0 0 0 2 2 0 1 1 1 0 0 1 0 1 0 0 0 0 10 1 1098.6033 Q12873;E9PG89;Q12873-2 Q12873 1564 1573 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 2 0.0012137 106.16 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 16607000 386780 5142100 3666200 226260 769950 6416100 2561 430 2591 11348;11349;11350;11351;11352;11353 7493;7494 7494 2 GEGLVGDGPVDMR ATAMAMGRGEGLVGDG GDGPVDMRTSHSDMKS R G E M R T 0 1 0 2 0 0 1 4 0 0 1 0 1 0 1 0 0 0 0 2 0 13 0 1300.6082 Q86YP4;B5MC40;Q86YP4-2;C9JHD7;C9JJK9;C9JVY3;C9JMI3;C9JGN4 Q86YP4 74 86 GATAD2A Transcriptional repressor p66-alpha yes no 2 0.0022315 70.68 By matching By matching By matching By matching By matching By MS/MS 1 3586900 0 0 0 0 0 3586900 2562 170 2592 11354 7495 7495 1 GEGVSTVGYR RPGGIEARGEGVSTVG GVSTVGYRNKNVRQKT R G E Y R N 0 1 0 0 0 0 1 3 0 0 0 0 0 0 0 1 1 0 1 2 0 10 0 1023.4985 Q9P031;F8VNY5 Q9P031 19 28 CCDC59 Thyroid transcription factor 1-associated protein 26 yes no 2 0.034866 55.353 By matching By matching By matching By matching By matching By MS/MS 1 1 1986600 0 0 0 0 1160300 826340 2563 1571 2593 11355;11356 7496 7496 1 GEGVSTVGYRNK RPGGIEARGEGVSTVG STVGYRNKNVRQKTWR R G E N K N 0 1 1 0 0 0 1 3 0 0 0 1 0 0 0 1 1 0 1 2 0 12 1 1265.6364 Q9P031;F8VNY5 Q9P031 19 30 CCDC59 Thyroid transcription factor 1-associated protein 26 yes no 3 0.0022829 75.416 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 2013200 519650 331300 664110 498150 0 0 2564 1571 2594 11357;11358;11359;11360 7497;7498;7499 7499 3 GEITPAAIQK AAPRQRGKGEITPAAI ITPAAIQKMLDDNNHL K G E Q K M 2 0 0 0 0 1 1 1 0 2 0 1 0 0 1 0 1 0 0 0 0 10 0 1026.571 Q15532-2;Q15532 Q15532-2 14 23 SS18 Protein SSXT yes no 2 0.015276 67.704 By matching By matching By matching By matching By matching By MS/MS 1 1 2586300 0 682320 0 0 0 1904000 2565 1140 2595 11361;11362 7500 7500 1 GEPAAAAAPEAGASPVEK ASPSAAEKGEPAAAAA AGASPVEKEAPAEGEA K G E E K E 7 0 0 0 0 0 3 2 0 0 0 1 0 0 3 1 0 0 0 1 0 18 0 1621.7948 P29966 P29966 88 105 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 2 0.0015726 58.635 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 3253300 0 747550 0 543070 0 1962700 2566 886 2596 11363;11364;11365 7501;7502 7502 1 GERLNQDQLDAVSK DYQERMNKGERLNQDQ DQLDAVSKYQEVTNNL K G E S K Y 1 1 1 2 0 2 1 1 0 0 2 1 0 0 0 1 0 0 0 1 0 14 1 1571.7903 E9PP31;E9PLA9;G3V153;Q14444-2;Q14444 E9PP31 85 98 CAPRIN1 Caprin-1 yes no 3 0.0032244 60.489 By matching By MS/MS By matching By matching By matching By matching 1 1 1895100 0 1311400 0 0 583730 0 2567 459 2597 11366;11367 7503 7503 1 GESLGIKHEEAPGHRPTTNPNASK AGTLSTDKGESLGIKH TTNPNASKFAQKIGGS K G E S K F 2 1 2 0 0 0 3 3 2 1 1 2 0 0 3 2 2 0 0 0 0 24 2 2526.2575 P21291;E9PND2;E9PS42;E9PP21 P21291 85 108 CSRP1 Cysteine and glycine-rich protein 1 yes no 4 0.038403 29.447 By MS/MS By matching By matching By matching By matching By matching 1 1049900 1049900 0 0 0 0 0 2568 859 2598 11368 7504 7504 1 GETQGLLTAK QEGSLLGKGETQGLLT TQGLLTAKGGVGKLVT K G E A K G 1 0 0 0 0 1 1 2 0 0 2 1 0 0 0 0 2 0 0 0 0 10 0 1016.5502 Q8IX01-4;Q8IX01-3;Q8IX01 Q8IX01-4 229 238 SUGP2 SURP and G-patch domain-containing protein 2 yes no 2 0.020366 63.32 By matching By matching By matching By matching By matching By MS/MS 1 775080 0 0 0 0 0 775080 2569 1284 2599 11369 7505 7505 1 GETVNDCHAEIISR KGDSLSLKGETVNDCH CHAEIISRRGFIRFLY K G E S R R 1 1 1 1 1 0 2 1 1 2 0 0 0 0 0 1 1 0 0 1 0 14 0 1599.7311 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 903 916 ADAR Double-stranded RNA-specific adenosine deaminase no no 3 1.7498E-30 118.24 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 8025900 0 795220 793990 858520 1901000 3677200 2570 352;968 2600 11370;11371;11372;11373;11374 7506 7506 1 GETVNDCHAEIISRR KGDSLSLKGETVNDCH HAEIISRRGFIRFLYS K G E R R G 1 2 1 1 1 0 2 1 1 2 0 0 0 0 0 1 1 0 0 1 0 15 1 1755.8322 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 903 917 ADAR Double-stranded RNA-specific adenosine deaminase no no 3 0.020883 37.793 By matching By matching By matching By matching By matching By MS/MS 1 884520 0 0 0 0 0 884520 2571 352;968 2601 11375 7507 7507 1 GEYHRAPVAIK NEVSTLYKGEYHRAPV HRAPVAIKVFKKLQAG K G E I K V 2 1 0 0 0 0 1 1 1 1 0 1 0 0 1 0 0 0 1 1 0 11 1 1239.6724 Q8NB16;I3L4A6 Q8NB16 220 230 MLKL Mixed lineage kinase domain-like protein yes no 3 0.014348 60.064 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2037300 0 443950 378160 0 235570 979650 2572 1314 2602 11376;11377;11378;11379 7508 7508 1 GFCQDESIYK WFFDSIEKGFCQDESI CQDESIYKTEPRPEAK K G F Y K T 0 0 0 1 1 1 1 1 0 1 0 1 0 1 0 1 0 0 1 0 0 10 0 1245.5336 Q92547;H0Y8I7;I3L1F2 Q92547 274 283 TOPBP1 DNA topoisomerase 2-binding protein 1 yes no 2 0.0027701 97.597 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 16292000 0 4076100 0 0 4605500 7610600 2573 1351 2603 11380;11381;11382 7509;7510;7511 7509 3 GFCQDESIYKTEPRPEAK WFFDSIEKGFCQDESI TEPRPEAKTMPNSSTP K G F A K T 1 1 0 1 1 1 3 1 0 1 0 2 0 1 2 1 1 0 1 0 0 18 2 2154.0052 Q92547;H0Y8I7;I3L1F2 Q92547 274 291 TOPBP1 DNA topoisomerase 2-binding protein 1 yes no 3;4 0.001447 57.973 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 41592000 0 9076500 11528000 4689700 7328400 8969400 2574 1351 2604 11383;11384;11385;11386;11387;11388;11389;11390;11391;11392 7512;7513;7514;7515;7516;7517 7513 6 GFDTSSSSSNSAASSSFK PGTKSGFKGFDTSSSS SAASSSFKFGVSSSSS K G F F K F 2 0 1 1 0 0 0 1 0 0 0 1 0 2 0 9 1 0 0 0 0 18 0 1752.7439 P49790;F6QR24;Q4LE47 P49790 887 904 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 2 0.0042911 47.68 By matching By matching By matching By matching By matching By MS/MS 1 1 1252500 0 418970 0 0 0 833580 2575 531 2605 11393;11394 7518 7518 1 GFEAGFENEDNSK PVLFQSPRGFEAGFEN FENEDNSKRDISEEVQ R G F S K R 1 0 2 1 0 0 3 2 0 0 0 1 0 2 0 1 0 0 0 0 0 13 0 1442.595 Q8IWY8-2;Q8IWY8;Q8IWY8-4 Q8IWY8-2 444 456 ZSCAN29 Zinc finger and SCAN domain-containing protein 29 yes no 2 0.0022327 66.215 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 2860900 0 579490 396860 0 375730 1508900 2576 1282 2606 11395;11396;11397;11398 7519;7520 7520 2 GFGYGQGAGALVHAQ YAKNFGPKGFGYGQGA AGALVHAQ________ K G F A Q - 3 0 0 0 0 2 0 5 1 0 1 0 0 1 0 0 0 0 1 1 0 15 0 1431.6895 Q16527;F8VW96 Q16527 179 193 CSRP2 Cysteine and glycine-rich protein 2 yes no 2 2.5164E-102 139.78 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 267400000 31643000 61891000 0 10351000 12362000 151160000 2577 1152 2607 11399;11400;11401;11402;11403;11404 7521;7522;7523;7524;7525 7521 5 GFGYKGSCFHR RALSTGEKGFGYKGSC YKGSCFHRIIPGFMCQ K G F H R I 0 1 0 0 1 0 0 3 1 0 0 1 0 2 0 1 0 0 1 0 0 11 1 1314.5928 P62937;B4DM82;F8WE65;C9J5S7 P62937 45 55 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 3 0.020044 56.043 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 4086900 0 572840 0 749610 808190 1956200 2578 999 2608 11405;11406;11407;11408 7526 7526 1 GFLQGAPAGGEK YGLAVETKGFLQGAPA GAPAGGEKSGALPQQY K G F E K S 2 0 0 0 0 1 1 4 0 0 1 1 0 1 1 0 0 0 0 0 0 12 0 1130.572 Q9UHF7;Q9UHF7-3;Q9UHF7-2;E5RJ97;E5RFF3;H0YC29 Q9UHF7 851 862 TRPS1 Zinc finger transcription factor Trps1 yes no 2 0.0055041 63.864 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 5601200 555370 695020 870320 413720 859320 2207500 2579 1594 2609 11409;11410;11411;11412;11413;11414 7527;7528 7527 2 GFNEGLWEIDNNPKVK YGKPNKRKGFNEGLWE IDNNPKVKFSSQQAAT K G F V K F 0 0 3 1 0 0 2 2 0 1 1 2 0 1 1 0 0 1 0 1 0 16 1 1858.9214 O75475;O75475-2 O75475 76 91 PSIP1 PC4 and SFRS1-interacting protein yes no 2;3 2.2195E-50 120.29 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 66074000 0 55335000 0 10346000 0 391940 2580 741 2610 11415;11416;11417 7529;7530;7531 7531 3 GFNLPYQDARK TPTEYLQRGFNLPYQD LPYQDARKCLGRFGLE R G F R K C 1 1 1 1 0 1 0 1 0 0 1 1 0 1 1 0 0 0 1 0 0 11 1 1307.6622 Q8NE71;Q8NE71-2;H0YGW7;Q5STZ7 Q8NE71 714 724 ABCF1 ATP-binding cassette sub-family F member 1 yes no 3 0.002144 78.513 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 15960000 4529800 2119700 1206400 1747900 0 6356000 2581 1321 2611 11418;11419;11420;11421;11422 7532;7533 7532 2 GFPHVIYAR RLQVAGRKGFPHVIYA FPHVIYARLWRWPDLH K G F A R L 1 1 0 0 0 0 0 1 1 1 0 0 0 1 1 0 0 0 1 1 0 9 0 1058.5661 E7EUB6;Q9BYG6;Q13485 E7EUB6 89 97 SMAD4 Mothers against decapentaplegic homolog 4 yes no 2 0.02 69.825 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5791400 0 0 735360 0 2083600 2972400 2582 385 2612 11423;11424;11425 7534 7534 1 GFQGTTQTSHGSLMTNK RLFRSSSKGFQGTTQT HGSLMTNKQHQGKSNN K G F N K Q 0 0 1 0 0 2 0 3 1 0 1 1 1 1 0 2 4 0 0 0 0 17 0 1793.8366 Q8NDF8;H3BQM0;E9PC61;B4DV38 Q8NDF8 527 543 PAPD5 PAP-associated domain-containing protein 5 yes no 3 0.0010738 80.719 By matching By matching By matching By matching By matching By MS/MS 1 1 2787500 0 0 497680 0 0 2289900 2583 130 2613 11426;11427 7535 7535 1 GFQRPVYLFHK ATPHNTSKGFQRPVYL RPVYLFHKARSPSH__ K G F H K A 0 1 0 0 0 1 0 1 1 0 1 1 0 2 1 0 0 0 1 1 0 11 1 1390.751 D6W5V7;Q7L2J0 D6W5V7 204 214 MEPCE 7SK snRNA methylphosphate capping enzyme yes no 3 0.0035604 82.261 By matching By matching By matching By matching By matching By MS/MS 1 1 4141500 0 0 0 804620 0 3336800 2584 332 2614 11428;11429 7536 7536 1 GFSCGSAIVGGGK QCVRGGPRGFSCGSAI SAIVGGGKRGAFSSVS R G F G K R 1 0 0 0 1 0 0 5 0 1 0 1 0 1 0 2 0 0 0 1 0 13 0 1195.5656 F8VS64;P19013;CON__P19013;F5H8K9;F8VX05;F8VZR6 F8VS64 14 26 KRT4 Keratin, type II cytoskeletal 4 yes no 2 0.0019752 82.774 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 16018000 0 0 1776100 161540 8193400 5886800 + 2585 300 2615 11430;11431;11432;11433 7537 7537 1 GFSDSGGGPPAKQR RGSLLLRRGFSDSGGG GGPPAKQRDLEGAVSR R G F Q R D 1 1 0 1 0 1 0 4 0 0 0 1 0 1 2 2 0 0 0 0 0 14 1 1359.6531 Q9H307;G3V5F0;G3V579 Q9H307 64 77 PNN Pinin yes no 3 0.0070564 53.448 By matching By matching By matching By matching By matching By MS/MS 1 1 1 976190 0 219240 0 0 319730 437230 2586 1486 2616 11434;11435;11436 7538 7538 1 GFSLLATEDK EYSASQLKGFSLLATE SLLATEDKEALKKQLP K G F D K E 1 0 0 1 0 0 1 1 0 0 2 1 0 1 0 1 1 0 0 0 0 10 0 1079.5499 P09874;F8WC10 P09874 183 192 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2 2.1572E-11 117.71 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 2587 815 2617 11437 7539 7539 1 GFSLLATEDKEALKK EYSASQLKGFSLLATE EDKEALKKQLPGVKSE K G F K K Q 2 0 0 1 0 0 2 1 0 0 3 3 0 1 0 1 1 0 0 0 0 15 2 1648.9036 P09874;F8WC10 P09874 183 197 PARP1 Poly [ADP-ribose] polymerase 1 yes no 3 0.0078539 61.167 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 18699000 12835000 870340 0 1262300 0 3731600 2588 815 2618 11438;11439;11440;11441 7540;7541;7542;7543 7540 4 GFSQSANLVVHQR FTCSVCGKGFSQSANL ANLVVHQRIHTGEKPF K G F Q R I 1 1 1 0 0 2 0 1 1 0 1 0 0 1 0 2 0 0 0 2 0 13 0 1441.7426 P13682;B4DUB8 P13682 230 242 ZNF35 Zinc finger protein 35 yes no 2;3 0.0012815 80.014 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 2 2 1 1 1 1 15580000 3319300 1404900 1168400 912460 3337700 5437700 2589 835 2619 11442;11443;11444;11445;11446;11447;11448;11449 7544;7545;7546;7547;7548;7549;7550 7546 7 GFSRPDHLSCHVK YTCSVCGKGFSRPDHL DHLSCHVKHVHSTERP K G F V K H 0 1 0 1 1 0 0 1 2 0 1 1 0 1 1 2 0 0 0 1 0 13 1 1538.7412 Q14119 Q14119 240 252 VEZF1 Vascular endothelial zinc finger 1 yes yes 3 0.0011463 77.185 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 7552500 148600 0 1286400 2271300 0 3846200 2590 1094 2620 11450;11451;11452;11453 7551;7552;7553;7554 7552 4 GFSSGSAVVSGGSRR GGGGGGFRGFSSGSAV VVSGGSRRSTSSFSCL R G F R R S 1 2 0 0 0 0 0 4 0 0 0 0 0 1 0 5 0 0 0 2 0 15 1 1409.7011 P35908;CON__P35908;CON__Q3TTY5 P35908 21 35 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 0.0003823 70.563 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 5086800 0 1084200 0 1065300 1032800 1904500 + 2591 302 2621 11454;11455;11456;11457 7555;7556;7557 7556 3 GFYDKDSSGWSSSKDK LRNREATKGFYDKDSS GWSSSKDKDAYSSFGS K G F D K D 0 0 0 3 0 0 0 2 0 0 0 3 0 1 0 5 0 1 1 0 0 16 2 1792.7904 O00571;B4DLU5;B4E3C4;B4DLA0 O00571 51 66 DDX3X ATP-dependent RNA helicase DDX3X yes no 3 0.019639 47.506 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 3609200 714370 519320 1384500 990950 0 0 2592 693 2622 11458;11459;11460;11461 7558 7558 1 GFYSNGAASSVSTK SLNNTSIKGFYSNGAA AASSVSTKHALIMDEV K G F T K H 2 0 1 0 0 0 0 2 0 0 0 1 0 1 0 4 1 0 1 1 0 14 0 1374.6416 P35251-2;P35251;H0Y8U4 P35251-2 700 713 RFC1 Replication factor C subunit 1 yes no 2 0.00061501 87.083 By matching By matching By matching By matching By matching By MS/MS 1 1 1718400 0 0 0 0 352120 1366300 2593 896 2623 11462;11463 7559 7559 1 GGAAVDPDSGLEHSAHVLEK KRMKLTLKGGAAVDPD HSAHVLEKGGKVFSAT K G G E K G 3 0 0 2 0 0 2 3 2 0 2 1 0 0 1 2 0 0 0 2 0 20 0 1987.9599 P09874 P09874 529 548 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 0.00018475 63.614 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 3745100 875070 1594800 640560 0 0 634650 2594 815 2624 11464;11465;11466;11467 7560;7561 7560 2 GGENVKAINQQTGAFVEISR KCGLVIGRGGENVKAI GAFVEISRQLPPNGDP R G G S R Q 2 1 2 0 0 2 2 3 0 2 0 1 0 1 0 1 1 0 0 2 0 20 1 2117.0865 Q92945-2;Q92945 Q92945-2 443 462 KHSRP Far upstream element-binding protein 2 yes no 3 1.7372E-171 151.28 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 72020000 24243000 15711000 20254000 10121000 1692000 0 2595 1366 2625 11468;11469;11470;11471;11472 7562;7563;7564;7565;7566 7565 5 GGEQINKIQQDSGCK MVGLIIGRGGEQINKI IQQDSGCKVQISPDSG R G G C K V 0 0 1 1 1 3 1 3 0 2 0 2 0 0 0 1 0 0 0 0 0 15 1 1660.7839 Q92945-2;Q92945;E7EP96 Q92945-2 163 177 KHSRP Far upstream element-binding protein 2 yes no 2;3 2.0019E-13 103.3 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 66431000 4609500 13360000 10585000 6164700 15158000 16554000 2596 1366 2626 11473;11474;11475;11476;11477;11478;11479;11480;11481;11482;11483;11484;11485 7567;7568;7569;7570;7571;7572;7573;7574;7575;7576;7577;7578 7573 11 GGEQINKIQQDSGCKVQISPDSGGLPER MVGLIIGRGGEQINKI DSGGLPERSVSLTGAP R G G E R S 0 1 1 2 1 4 2 5 0 3 1 2 0 0 2 3 0 0 0 1 0 28 2 2996.4622 Q92945-2;Q92945;E7EP96 Q92945-2 163 190 KHSRP Far upstream element-binding protein 2 yes no 4 1.6474E-19 75.044 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 19949000 7251300 2138500 8337100 0 0 2222300 2597 1366 2627 11486;11487;11488;11489 7579;7580;7581;7582 7579 4 GGETIKQLQER KAGLVIGKGGETIKQL TIKQLQERAGVKMILI K G G E R A 0 1 0 0 0 2 2 2 0 1 1 1 0 0 0 0 1 0 0 0 0 11 1 1257.6677 Q92945-2;Q92945;E7EP96;Q96I24;A6NJ37;Q96I24-2 Q92945-2 252 262 KHSRP;FUBP3 Far upstream element-binding protein 2;Far upstream element-binding protein 3 no no 2;3 2.5885E-07 107.97 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 3 2 1 2 1 2 78412000 9340300 19452000 4772500 5742800 15821000 23283000 2598 1366;1394 2628 11490;11491;11492;11493;11494;11495;11496;11497;11498;11499;11500 7583;7584;7585;7586;7587;7588;7589;7590;7591 7584 8 GGGDGGGGGRSFSQPEAGGSHHK NRREATPRGGGDGGGG EAGGSHHKVSVSPVVH R G G H K V 1 1 0 1 0 1 1 10 2 0 0 1 0 1 1 3 0 0 0 0 0 23 1 2094.9216 Q8WVV9-4;C9J9G0;Q8WVV9;Q5JB52;B7WPG3;Q8WVV9-3;Q8WVV9-2;C9IYN3 Q8WVV9-4 44 66 HNRNPLL;HNRPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 4 0.0081476 40.158 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 9339200 890730 3402200 0 0 1042600 4003600 2599 236 2629 11501;11502;11503;11504 7592;7593;7594 7592 3 GGGGGGFRGFSSGSAVVSGGSR ISCKSRGRGGGGGGFR AVVSGGSRRSTSSFSC R G G S R R 1 2 0 0 0 0 0 10 0 0 0 0 0 2 0 5 0 0 0 2 0 22 1 1898.8983 P35908;CON__P35908;CON__Q3TTY5 P35908 13 34 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 0.00054727 55.302 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 4887200 0 681010 1572300 1336900 0 1297100 + 2600 302 2630 11505;11506;11507;11508 7595;7596 7596 2 GGGGPGGGGPGGGSAGGPSQPPGGGGPGIRK GPPGAGDRGGGGPGGG GGGPGIRKDAFADAVQ R G G R K D 1 1 0 0 0 1 0 18 0 1 0 1 0 0 6 2 0 0 0 0 0 31 1 2397.1534 Q92945-2;Q92945 Q92945-2 41 71 KHSRP Far upstream element-binding protein 2 yes no 3 1.4558E-32 78.206 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 23723000 3577300 5713700 6785200 3624200 4023100 0 2601 1366 2631 11509;11510;11511;11512;11513 7597;7598;7599;7600;7601;7602 7597 6 GGGQEERPFVAR KEAGTVGRGGGQEERP EERPFVARFGFDVVTC R G G A R F 1 2 0 0 0 1 2 3 0 0 0 0 0 1 1 0 0 0 0 1 0 12 1 1301.6476 Q9HA64;F5H4E4;I3L2G3 Q9HA64 131 142 FN3KRP Ketosamine-3-kinase yes no 3 0.033206 46.73 By matching By MS/MS By matching By matching By matching By matching 1 1 923830 0 656640 0 0 0 267190 2602 1511 2632 11514;11515 7603 7603 1 GGHFYSAKPEILR SKSKEAQKGGHFYSAK SAKPEILRAMQRADEA K G G L R A 1 1 0 0 0 0 1 2 1 1 1 1 0 1 1 1 0 0 1 0 0 13 1 1473.7728 P52701;F5H769;P52701-2;E7ER38;C9JH55;C9J8Y8;C9J7Y7 P52701 162 174 MSH6 DNA mismatch repair protein Msh6 yes no 3 0.0066807 59.155 By matching By matching By matching By matching By MS/MS By matching 1 1 9861300 0 0 0 0 3924000 5937300 2603 959 2633 11516;11517 7604 7604 1 GGIPNVEGAAK QRRGMHQKGGIPNVEG PNVEGAAKLLWSEWTG K G G A K L 2 0 1 0 0 0 1 3 0 1 0 1 0 0 1 0 0 0 0 1 0 11 0 1011.5349 Q9BVP2-2;Q9BVP2 Q9BVP2-2 366 376 GNL3 Guanine nucleotide-binding protein-like 3 yes no 2 0.012994 61.344 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 16111000 2099200 0 1904600 1867000 5361100 4878700 2604 1455 2634 11518;11519;11520;11521;11522 7605 7605 1 GGKPEPPAMPQPVPTA TTPISEQKGGKPEPPA MPQPVPTA________ K G G T A - 2 0 0 0 0 1 1 2 0 0 0 1 1 0 6 0 1 0 0 1 0 16 1 1572.797 E9PPU1;H0YEU2;E9PL09;P23396 E9PPU1 143 158 RPS3 40S ribosomal protein S3 yes no 2 0.00075833 71.531 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 22758000 13302000 2119600 0 2069000 2812800 2454600 2605 457 2635 11523;11524;11525;11526;11527 7606;7607;7608;7609;7610 7606 5 GGLVWDENSSDGRYVK RKQKYFYKGGLVWDEN SSDGRYVKENCKPLKS K G G V K E 0 1 1 2 0 0 1 3 0 0 1 1 0 0 0 2 0 1 1 2 0 16 1 1780.838 P49761-1;P49761;P49761-3;G5E959;H3BRW2;H3BNQ5 P49761-1 410 425 CLK3 Dual specificity protein kinase CLK3 yes no 2;3 0.00081121 70.373 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 18703000 3201100 2324200 0 1076000 4687600 7414000 2606 944 2636 11528;11529;11530;11531;11532 7611;7612;7613 7613 3 GGPESRKDPSGASNPSADSPLHR GSGGSGAKGGPESRKD SADSPLHRGVHGKTGQ K G G H R G 2 2 1 2 0 0 1 3 1 0 1 1 0 0 4 5 0 0 0 0 0 23 2 2318.0999 B7ZAP5;P55317 B7ZAP5 256 278 FOXA1 Hepatocyte nuclear factor 3-alpha yes no 4 0.00054649 54.457 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 4831000 531560 859910 722320 0 1061300 1655900 2607 201 2637 11533;11534;11535;11536;11537 7614 7614 0 GGPGSTLSFVGK GPGDPKRKGGPGSTLS STLSFVGKRRGGNKLA K G G G K R 0 0 0 0 0 0 0 4 0 0 1 1 0 1 1 2 1 0 0 1 0 12 0 1105.5768 Q9BQ61 Q9BQ61 107 118 C19orf43 Uncharacterized protein C19orf43 yes yes 2 2.2159E-18 116.74 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 65722000 8559600 9946700 13286000 4298200 5940000 23692000 2608 1437 2638 11538;11539;11540;11541;11542;11543;11544 7615;7616;7617;7618;7619;7620 7617 6 GGPGSTLSFVGKR GPGDPKRKGGPGSTLS TLSFVGKRRGGNKLAL K G G K R R 0 1 0 0 0 0 0 4 0 0 1 1 0 1 1 2 1 0 0 1 0 13 1 1261.6779 Q9BQ61 Q9BQ61 107 119 C19orf43 Uncharacterized protein C19orf43 yes yes 3 0.0062219 53.448 By matching By matching By matching By matching By matching By MS/MS 1 2880200 0 0 0 0 0 2880200 2609 1437 2639 11545 7621 7621 1 GGPLQALTR EWTSGSSKGGPLQALT GPLQALTRESTRGSRR K G G T R E 1 1 0 0 0 1 0 2 0 0 2 0 0 0 1 0 1 0 0 0 0 9 0 911.51886 P42167 P42167 240 248 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes yes 2 0.0060651 93.649 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 4251400 1513400 0 0 0 2738000 0 2610 914 2640 11546;11547 7622;7623 7622 2 GGPPGQFHDNANGGQNGTVQEIMIPAGK DDIVSRGRGGPPGQFH EIMIPAGKAGLVIGKG R G G G K A 2 0 3 1 0 3 1 7 1 2 0 1 1 1 3 0 1 0 0 1 0 28 0 2790.3144 Q92945-2;Q92945;E7EP96 Q92945-2 217 244 KHSRP Far upstream element-binding protein 2 yes no 3 4.6878E-93 118.09 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 2 2 431740000 73714000 73720000 90640000 27208000 24635000 141830000 2611 1366 2641;2642 11548;11549;11550;11551;11552;11553;11554;11555;11556 7624;7625;7626;7627;7628;7629;7630;7631;7632;7633;7634;7635 7627 156 12 GGPRGFSCGSAIVGGGK IARQQCVRGGPRGFSC SAIVGGGKRGAFSSVS R G G G K R 1 1 0 0 1 0 0 7 0 1 0 1 0 1 1 2 0 0 0 1 0 17 1 1562.7624 F8VS64;P19013;CON__P19013;F5H8K9;F8VX05;F8VZR6 F8VS64 10 26 KRT4 Keratin, type II cytoskeletal 4 yes no 3 0.0017102 63.374 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 10407000 0 0 1618800 0 3516400 5272200 + 2612 300 2643 11557;11558;11559 7636;7637 7637 2 GGPSPGDVEAIK GLPTDKKKGGPSPGDV PGDVEAIKNAIANAST K G G I K N 1 0 0 1 0 0 1 3 0 1 0 1 0 0 2 1 0 0 0 1 0 12 0 1125.5666 P09661;H0YLR3;H0YMA0 P09661 194 205 SNRPA1 U2 small nuclear ribonucleoprotein A yes no 2 0.0028937 72.731 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 12269000 971980 2981200 0 0 3810600 4505300 2613 814 2644 11560;11561;11562;11563 7638;7639 7638 2 GGQGPRPNICGICGK GRRGGRARGGQGPRPN NICGICGKSFGRGSTL R G G G K S 0 1 1 0 2 1 0 5 0 2 0 1 0 0 2 0 0 0 0 0 0 15 1 1569.7504 H3BS42;Q9H5H4;B7Z2Y7 H3BS42 223 237 ZNF768 Zinc finger protein 768 yes no 3 0.027889 40.477 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 7074700 612810 1384400 1184100 902270 1070000 1921100 2614 646 2645 11564;11565;11566;11567;11568;11569 7640 7640 1 GGRGDVGSADIQDLEK EFLECSAKGGRGDVGS ADIQDLEKWLAKIA__ K G G E K W 1 1 0 3 0 1 1 4 0 1 1 1 0 0 0 1 0 0 0 1 0 16 1 1615.7802 H7C4H2;Q9Y5M8 H7C4H2 139 154 SRPRB Signal recognition particle receptor subunit beta yes no 3 0.00174 77.027 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 6794900 1215500 2359100 0 0 0 3220300 2615 672 2646 11570;11571;11572 7641;7642;7643;7644 7642 4 GGRHVDYVADQIVTK VNSIATSKGGRHVDYV VADQIVTKLVDVVKKK K G G T K L 1 1 0 2 0 1 0 2 1 1 0 1 0 0 0 0 1 0 1 3 0 15 1 1656.8584 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5 P11388 322 336 TOP2A DNA topoisomerase 2-alpha yes no 3 4.9051E-10 101.04 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 8471000 0 1167700 541230 0 1730800 5031300 2616 655 2647 11573;11574;11575;11576 7645;7646 7645 2 GGRHVDYVVDQVVGK VNSIATTKGGRHVDYV VVDQVVGKLIEVVKKK K G G G K L 0 1 0 2 0 1 0 3 1 0 0 1 0 0 0 0 0 0 1 5 0 15 1 1626.8478 Q02880-2;Q02880;E9PCY5 Q02880-2 338 352 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 3 2.1405E-05 89.506 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 5220000 0 1281400 0 0 0 3938600 2617 1035 2648 11577;11578 7647;7648;7649 7648 3 GGSFGGRSSGSPYGGGYGSGGGSGGYGSR QSNYGPMKGGSFGGRS GSGGYGSRRF______ K G G S R R 0 2 0 0 0 0 0 15 0 0 0 0 0 1 1 7 0 0 3 0 0 29 1 2528.0701 E7EWI9;E7ERJ4;P51991-2;H7C1J8;P51991 E7EWI9 292 320 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 3 0.00013014 42.851 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 28414000 6409100 4046200 3531100 3394000 4698800 6335100 2618 371;955 2649 11579;11580;11581;11582;11583;11584 7650;7651;7652 7650 3 GGSGGGGSISGGGYGSGGGSGGRYGSGGGSK GGRQSGSRGGSGGGGS YGSGGGSKGGSISGGG R G G S K G 0 1 0 0 0 0 0 19 0 1 0 1 0 0 0 7 0 0 2 0 0 31 1 2434.0494 P35908;CON__P35908 P35908 550 580 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 6.2408E-25 70.112 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 21038000 0 1141400 9634800 2965700 2343800 4952300 + 2619 302 2650 11585;11586;11587;11588;11589 7653;7654;7655;7656 7654 4 GGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGK YGGGSGSRGGSGGSHG GYGGGSGKSSHS____ R G G G K S 1 0 0 0 0 0 3 23 1 0 0 1 0 1 0 8 0 0 2 0 0 40 0 3222.2743 P35527;CON__P35527 P35527 580 619 KRT9 Keratin, type I cytoskeletal 9 yes no 3 1.1011E-19 51.268 By matching By matching By MS/MS By matching By matching By matching 1 1 7684600 0 0 7030000 654570 0 0 + 2620 899 2651 11590;11591 7657 7657 1 GGSGGSYGGGGSGGGYGGGSGSR GSYGRGSRGGSGGSYG YGGGSGSRGGSGGSYG R G G S R G 0 1 0 0 0 0 0 15 0 0 0 0 0 0 0 5 0 0 2 0 0 23 0 1790.7204 P35527;CON__P35527 P35527 491 513 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.0073141 40.533 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 2410700 0 294110 1353300 421790 0 341430 + 2621 899 2652 11592;11593;11594;11595 7658 7658 1 GGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSR GKIGLGGRGGSGGSYG YGGGSGSRGGSGGSYG R G G S R G 0 3 0 0 0 0 0 21 0 0 0 0 0 0 0 8 0 0 3 0 0 35 2 2869.2108 P35527;CON__P35527 P35527 479 513 KRT9 Keratin, type I cytoskeletal 9 yes no 4 0.015545 22.698 By matching By matching By MS/MS By matching By matching By matching 1 845260 0 0 845260 0 0 0 + 2622 899 2653 11596 7659 7659 1 GGSGSGPTIEEVD GFGAQGPKGGSGSGPT GPTIEEVD________ K G G V D - 0 0 0 1 0 0 2 4 0 1 0 0 0 0 1 2 1 0 0 1 0 13 0 1203.5255 P08107;H0YG33;F8VZJ4;F5H1D3;F5GZ62;Q5SP16;E7EP94 P08107 629 641 HSPA1A Heat shock 70 kDa protein 1A/1B yes no 2 0.010497 55.04 By matching By matching By matching By matching By matching By MS/MS 1 1 2876400 0 0 0 0 1202900 1673500 2623 619 2654 11597;11598 7660 7660 1 GGSISGGGYGSGGGK YGSGGGSKGGSISGGG GYGSGGGKHSSGGGSR K G G G K H 0 0 0 0 0 0 0 9 0 1 0 1 0 0 0 3 0 0 1 0 0 15 0 1196.5422 P35908;CON__P35908 P35908 581 595 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 0.037418 38.399 By matching By MS/MS By matching By matching By matching By matching 1 1 1799200 0 1319400 0 479790 0 0 + 2624 302 2655 11599;11600 7661 7661 1 GGSLESDGCPKEPAK CKEEKMPRGGSLESDG GCPKEPAKTQPAVATA R G G A K T 1 0 0 1 1 0 2 3 0 0 1 2 0 0 2 2 0 0 0 0 0 15 1 1530.6984 P51608-2;P51608 P51608-2 433 447 MECP2 Methyl-CpG-binding protein 2 yes no 3 0.00056754 82.925 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 4979200 0 0 358210 564760 1964900 2091300 2625 953 2656 11601;11602;11603;11604 7662;7663 7663 2 GGTLFGGEVCK KLASTPFKGGTLFGGE LFGGEVCKVIKKRGNK K G G C K V 0 0 0 0 1 0 1 4 0 0 1 1 0 1 0 0 1 0 0 1 0 11 0 1123.5332 P42166 P42166 675 685 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 0.030492 51.286 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 12703000 702490 0 1539800 0 284370 10177000 2626 913 2657 11605;11606;11607;11608 7664 7664 1 GGTRELLPCGPETQPQSETK ELAGTGSRGGTRELLP TQPQSETKTTPSQAQP R G G T K T 0 1 0 0 1 2 3 3 0 0 2 1 0 0 3 1 3 0 0 0 0 20 1 2184.0481 Q76L83-2;E7EWD6;Q76L83 Q76L83-2 478 497 ASXL2 Putative Polycomb group protein ASXL2 yes no 3 0.00035252 60.621 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 5670500 574050 1243300 1275800 0 0 2577300 2627 391 2658 11609;11610;11611;11612 7665;7666 7666 2 GGVEEGPTVLRK PFSKGQPRGGVEEGPT EGPTVLRKAGLLEKLK R G G R K A 0 1 0 0 0 0 2 3 0 0 1 1 0 0 1 0 1 0 0 2 0 12 1 1240.6776 P05089-3;P05089;P05089-2 P05089-3 22 33 ARG1 Arginase-1 yes no 3 0.00093703 80.834 By matching By MS/MS By MS/MS By matching By matching By matching 1 3 2 1 1 7741700 155140 2878600 2074700 901100 0 1732200 2628 793 2659 11613;11614;11615;11616;11617;11618;11619;11620 7667;7668;7669 7667 3 GGVEVLESCQGSSNGAQDQEASEQFGSPVAERGK EDERSEEKGGVEVLES SPVAERGKRLPGVAGQ K G G G K R 3 1 1 1 1 4 5 6 0 0 1 1 0 1 1 5 0 0 0 3 0 34 1 3493.5652 Q86W50;B7Z3X7 Q86W50 472 505 METTL16 Methyltransferase-like protein 16 yes no 3 0.00017106 32.172 By matching By MS/MS By matching By matching By matching By matching 1 4714600 0 4714600 0 0 0 0 2629 1267 2660 11621 7670 7670 1 GGVRGGQDQFNWEDVK ________________ QFNWEDVKTDKQRENY R G G V K T 0 1 1 2 0 2 1 4 0 0 0 1 0 1 0 0 0 1 0 2 0 16 1 1790.8336 Q9BU76-4;Q9BU76;Q9BU76-2;Q9BU76-3 Q9BU76-4 7 22 MMTAG2 Multiple myeloma tumor-associated protein 2 yes no 3 0.00075491 81.526 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 11200000 0 0 0 3459500 0 7741000 2630 1449 2661 11622;11623 7671;7672;7673 7672 3 GHAVGDIPGVRFK LVAGFGRKGHAVGDIP DIPGVRFKSFHGYSGM K G H F K S 1 1 0 1 0 0 0 3 1 1 0 1 0 1 1 0 0 0 0 2 0 13 1 1351.7361 D6RD47;P62266 D6RD47 109 121 RPS23 40S ribosomal protein S23 yes no 3 0.0019702 82.505 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4809300 0 0 1125900 1121700 0 2561800 2631 325 2662 11624;11625;11626 7674 7674 1 GHLSRPEAQSLSPYTTSANR GTTEPHSRGHLSRPEA PYTTSANRAKLLAKNR R G H N R A 2 2 1 0 0 1 1 1 1 0 2 0 0 0 2 4 2 0 1 0 0 20 1 2171.0719 O94776;Q68DB1 O94776 424 443 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 3;4 7.6754E-11 90.872 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 2 42537000 0 9160200 8820200 0 0 24557000 2632 754 2663 11627;11628;11629;11630;11631;11632 7675;7676;7677;7678;7679 7676 5 GHLSRPEAQSLSPYTTSANRAK GTTEPHSRGHLSRPEA TTSANRAKLLAKNRQT R G H A K L 3 2 1 0 0 1 1 1 1 0 2 1 0 0 2 4 2 0 1 0 0 22 2 2370.204 O94776;Q68DB1 O94776 424 445 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 3;4 2.7951E-138 133.35 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 2 54869000 0 13594000 13382000 0 0 27893000 2633 754 2664 11633;11634;11635;11636 7680;7681;7682;7683 7682 4 GHQQLYWSHPRK ________________ LYWSHPRKFGQGSRSC M G H R K F 0 1 0 0 0 2 0 1 2 0 1 1 0 0 1 1 0 1 1 0 0 12 1 1535.7746 P62273;P62273-2 P62273 2 13 RPS29 40S ribosomal protein S29 yes no 3 0.0011179 75.739 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2386400 0 0 0 329130 810020 1247200 2634 988 2665 11637;11638;11639 7684;7685 7684 2 GIASTSDPPTANIKPTPVVSTPSK TTPASGERGIASTSDP PVVSTPSKVTAAAMAG R G I S K V 2 0 1 1 0 0 0 1 0 2 0 2 0 0 5 4 4 0 0 2 0 24 1 2364.2537 P12270 P12270 1657 1680 TPR Nucleoprotein TPR yes yes 3 2.7316E-41 101.75 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 24681000 9625500 2132100 10173000 0 0 2750400 2635 827 2666 11640;11641;11642;11643 7686;7687;7688;7689 7689 4 GIAVIVTGQGEQCER KGIEELEKGIAVIVTG GQGEQCERARRLQAKM K G I E R A 1 1 0 0 1 2 2 3 0 2 0 0 0 0 0 0 1 0 0 2 0 15 0 1615.7988 Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0 Q9UBP0-4 73 87 SPAST Spastin yes no 2 0.0044172 54.276 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1667800 0 576960 0 0 0 1090800 2636 1583 2667 11644;11645 7690;7691 7690 2 GIDFKEDGNILGHK LVNRIELKGIDFKEDG DGNILGHKLEYNYNSH K G I H K L 0 0 1 2 0 0 1 3 1 2 1 2 0 1 0 0 0 0 0 0 0 14 1 1541.7838 CON__Q9U6Y5 CON__Q9U6Y5 127 140 yes yes 3 0.040622 74.987 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 + 2637 310 2668 11646 7692 7692 1 GIEERQQLIK NLEMFKGKGIEERQQL EERQQLIKQLRDELRL K G I I K Q 0 1 0 0 0 2 2 1 0 2 1 1 0 0 0 0 0 0 0 0 0 10 1 1212.6826 Q8WXI9 Q8WXI9 158 167 GATAD2B Transcriptional repressor p66-beta yes yes 2 0.0071804 97.597 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 7427900 0 1062000 1460700 0 165310 4739900 2638 1344 2669 11647;11648;11649;11650 7693 7693 1 GIGEFFR RPTPKWQKGIGEFFRL KGIGEFFRLSPKDSEK K G I F R L 0 1 0 0 0 0 1 2 0 1 0 0 0 2 0 0 0 0 0 0 0 7 0 824.41809 Q15004;H0YMA4;H0YKX3 Q15004 64 70 KIAA0101 PCNA-associated factor yes no 2 0.010676 100.74 By matching By MS/MS By matching By matching By matching By matching 1 11111000 0 11111000 0 0 0 0 2639 1124 2670 11651 7694 7694 1 GIGEFFRLSPKDSEK RPTPKWQKGIGEFFRL LSPKDSEKENQIPEEA K G I E K E 0 1 0 1 0 0 2 2 0 1 1 2 0 2 1 2 0 0 0 0 0 15 2 1708.8784 Q15004;H0YMA4;H0YKX3 Q15004 64 78 KIAA0101 PCNA-associated factor yes no 3 0.016753 52.599 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 12939000 0 0 0 2177100 0 10762000 2640 1124 2671 11652;11653 7695;7696 7696 1 GIHVETLETEK TLSWKYPKGIHVETLE VETLETEKKERYIVIS K G I E K K 0 0 0 0 0 0 3 1 1 1 1 1 0 0 0 0 2 0 0 1 0 11 0 1254.6456 O95453-2;O95453-3;O95453;H3BRK1 O95453-2 163 173 PARN Poly(A)-specific ribonuclease PARN yes no 2;3 3.659E-06 106.62 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 3 2 27992000 2807300 3881700 3841200 1712600 4938300 10810000 2641 772 2672 11654;11655;11656;11657;11658;11659;11660;11661;11662;11663;11664;11665;11666;11667 7697;7698;7699;7700;7701;7702;7703;7704;7705 7705 9 GINSSNVENQLQATQAARK WSVDDIVKGINSSNVE QATQAARKLLSREKQP K G I R K L 3 1 3 0 0 3 1 1 0 1 1 1 0 0 0 2 1 0 0 1 0 19 1 2028.0348 P52292 P52292 84 102 KPNA2 Importin subunit alpha-1 yes yes 3 0.020203 33.667 By matching By MS/MS By matching By matching By matching By matching 1 1 2424700 0 1000700 0 0 0 1424000 2642 957 2673 11668;11669 7706 7706 1 GINVFRETAKQK KVPGDEDKGINVFRET FRETAKQKLDPAASVT K G I Q K L 1 1 1 0 0 1 1 1 0 1 0 2 0 1 0 0 1 0 0 1 0 12 2 1389.7728 P46013;F5H4V4;P46013-2 P46013 2156 2167 MKI67 Antigen KI-67 no no 3 0.012118 67.214 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 14450000 0 4664300 2540900 1228100 1608000 4408300 2643 919;920 2674 11670;11671;11672;11673;11674 7707 7707 1 GIPACEQNVSRK PDNNQQPKGIPACEQN CEQNVSRKDTRSEQDK K G I R K D 1 1 1 0 1 1 1 1 0 1 0 1 0 0 1 1 0 0 0 1 0 12 1 1357.6772 Q02040 Q02040 559 570 AKAP17A A-kinase anchor protein 17A yes yes 3 0.0063056 57.175 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1464100 638600 0 0 0 825470 0 2644 1032 2675 11675;11676 7708;7709 7709 2 GIPHLVTHDAR RKIFVGTKGIPHLVTH HLVTHDARTIRYPDPL K G I A R T 1 1 0 1 0 0 0 1 2 1 1 0 0 0 1 0 1 0 0 1 0 11 0 1214.652 P62701;Q8TD47;C9JEH7;P22090 P62701 135 145 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 3 0.0055651 69.721 By matching By matching By matching By matching By MS/MS By matching 1 1 4224100 0 0 0 0 2551500 1672600 2645 993 2676 11677;11678 7710 7710 1 GIPLESTDGERLVK LVMVILFKGIPLESTD TDGERLVKAAQCGHPV K G I V K A 0 1 0 1 0 0 2 2 0 1 2 1 0 0 1 1 1 0 0 1 0 14 1 1512.8148 P08651-4;P08651-5;P08651-3;P08651-2;P08651;F8W9H9;Q12857-2;B1AKN5;F5H0R0;Q12857;B1AKN8;F8W8W3;B1AKN6;B1AKN7 P08651-4 131 144 NFIC;NFIA Nuclear factor 1 C-type;Nuclear factor 1 A-type no no 2;3 7.8074E-13 104.17 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 2 1 1 2 35424000 12198000 3591700 7535300 0 931470 11168000 2646 563;1062 2677 11679;11680;11681;11682;11683;11684;11685;11686 7711;7712;7713;7714;7715 7715 5 GIPVVEHKVEK ISIWNNGKGIPVVEHK VVEHKVEKVYVPALIF K G I E K V 0 0 0 0 0 0 2 1 1 1 0 2 0 0 1 0 0 0 0 3 0 11 1 1233.7081 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5;Q02880-2;Q02880;E9PCY5 Q02880-2 140 150 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta;DNA topoisomerase 2 no no 3 0.0048077 75.566 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 13330000 0 0 2726500 546380 3302900 6754700 2647 1035;655 2678 11687;11688;11689;11690 7716;7717 7716 2 GIRIPYPGRSPQDLASTSR EFRSDSARGIRIPYPG QDLASTSRAREGLRNM R G I S R A 1 3 0 1 0 1 0 2 0 2 1 0 0 0 3 3 1 0 1 0 0 19 2 2070.097 Q9HC52;C9J6K3;C9JM54 Q9HC52 101 119 CBX8 Chromobox protein homolog 8 yes no 4 0.028206 34.669 By matching By matching By matching By matching By matching By MS/MS 1 23200000 0 0 0 0 0 23200000 2648 1519 2679 11691 7718 7718 1 GISAGAVQTAGK PLPGKLPKGISAGAVQ GAVQTAGKKGPQSLFN K G I G K K 3 0 0 0 0 1 0 3 0 1 0 1 0 0 0 1 1 0 0 1 0 12 0 1058.572 P46087;Q3KQS4;F5GWB7;F5H709 P46087 80 91 NOP2 Putative ribosomal RNA methyltransferase NOP2 yes no 2 0.0019624 89.356 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 13014000 830100 1172700 786710 1119800 6014300 3089900 2649 923 2680 11692;11693;11694;11695;11696;11697 7719;7720;7721;7722;7723 7721 5 GISQFQVLGSQSRDCHPK TTGPQESKGISQFQVL QSRDCHPKACRVSPMT K G I P K A 0 1 0 1 1 3 0 2 1 1 1 1 0 1 1 3 0 0 0 1 0 18 1 2042.9956 Q14865-2;Q14865 Q14865-2 693 710 ARID5B AT-rich interactive domain-containing protein 5B yes no 4 0.0090036 43.208 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3749100 369030 1122300 1119000 0 0 1138800 2650 1117 2681 11698;11699;11700;11701 7724 7724 1 GITEECLKQPSLEQK IEELALAKGITEECLK KQPSLEQKEGRRASHT K G I Q K E 0 0 0 0 1 2 3 1 0 1 2 2 0 0 1 1 1 0 0 0 0 15 1 1758.8822 E7EQT4;Q9UKV3;Q9UKV3-5 E7EQT4 501 515 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2;3 1.0474E-42 122.66 By matching By matching By matching By matching By matching By MS/MS 1 1 2 2 12302000 0 3639000 1336300 0 3082000 4244600 2651 364 2682 11702;11703;11704;11705;11706;11707 7725;7726;7727 7726 3 GIVEFASKPAAR DRGRSTGKGIVEFASK FASKPAARKAFERCSE K G I A R K 3 1 0 0 0 0 1 1 0 1 0 1 0 1 1 1 0 0 0 1 0 12 1 1244.6877 P23246;P23246-2 P23246 414 425 SFPQ Splicing factor, proline- and glutamine-rich yes no 2;3 1.0607E-09 107.09 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 2 1 1 2 1 27944000 8900700 6992500 1268500 986920 6612100 3182800 2652 865 2683 11708;11709;11710;11711;11712;11713;11714;11715;11716 7728;7729;7730;7731;7732;7733;7734 7732 7 GIVEFASKPAARK DRGRSTGKGIVEFASK ASKPAARKAFERCSEG K G I R K A 3 1 0 0 0 0 1 1 0 1 0 2 0 1 1 1 0 0 0 1 0 13 2 1372.7827 P23246;P23246-2 P23246 414 426 SFPQ Splicing factor, proline- and glutamine-rich yes no 3 0.0052487 74.237 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 16956000 0 1640300 1619500 2302600 6273800 5119500 2653 865 2684 11717;11718;11719;11720;11721 7735;7736;7737 7735 3 GIVEFSGKPAAR DRGRPSGKGIVEFSGK FSGKPAARKALDRCSE K G I A R K 2 1 0 0 0 0 1 2 0 1 0 1 0 1 1 1 0 0 0 1 0 12 1 1230.6721 Q15233;F5GYZ3;H7C367;C9IZL7 Q15233 191 202 NONO Non-POU domain-containing octamer-binding protein yes no 2;3 1.0598E-49 131.17 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 2 2 2 2 41077000 5883900 6052400 4935100 4638400 8085600 11482000 2654 1133 2685 11722;11723;11724;11725;11726;11727;11728;11729;11730;11731;11732;11733 7738;7739;7740;7741;7742;7743;7744;7745;7746;7747;7748 7741 11 GIVEFSGKPAARK DRGRPSGKGIVEFSGK SGKPAARKALDRCSEG K G I R K A 2 1 0 0 0 0 1 2 0 1 0 2 0 1 1 1 0 0 0 1 0 13 2 1358.767 Q15233;F5GYZ3;H7C367;C9IZL7 Q15233 191 203 NONO Non-POU domain-containing octamer-binding protein yes no 3 0.0044402 79.283 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 6271500 1059700 1152800 1122900 0 2936100 0 2655 1133 2686 11734;11735;11736;11737 7749;7750;7751;7752 7750 4 GIVESSVTSAVSGK TDICSSAKGIVESSVT VTSAVSGKDEVTPVPG K G I G K D 1 0 0 0 0 0 1 2 0 1 0 1 0 0 0 4 1 0 0 3 0 14 0 1319.6933 Q8NFC6 Q8NFC6 1952 1965 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 0.027934 52.966 By matching By MS/MS By matching By matching By matching By matching 1 1914000 0 1914000 0 0 0 0 2656 1325 2687 11738 7753 7753 0 GIVHITSESLAK DHRYRCQRGIVHITSE ITSESLAKDQLAIAAS R G I A K D 1 0 0 0 0 0 1 1 1 2 1 1 0 0 0 2 1 0 0 1 0 12 0 1253.698 Q9Y6X8 Q9Y6X8 497 508 ZHX2 Zinc fingers and homeoboxes protein 2 yes yes 3 0.0021736 73.9 By matching By matching By matching By matching By matching By MS/MS 1 2065900 0 0 0 0 0 2065900 2657 1664 2688 11739 7754 7754 1 GIYAMASR GKAQNASKGIYAMASR GIYAMASRDVFLLKNQ K G I S R D 2 1 0 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 1 0 0 8 0 867.42727 B7Z6Q6;Q99661;Q99661-2;B7Z7M6 B7Z6Q6 331 338 KIF2C Kinesin-like protein KIF2C yes no 2 2.4518E-09 122.74 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 23282000 0 2249700 1938000 0 5630500 13464000 2658 193 2689 11740;11741;11742;11743 7755;7756 7755 2 GKEDALVTKNLVPGESVYGEK HEGVFICRGKEDALVT GESVYGEKRVSISEGD R G K E K R 1 0 1 1 0 0 3 3 0 0 2 3 0 0 1 1 1 0 1 3 0 21 2 2232.1638 P22087 P22087 101 121 FBL rRNA 2-O-methyltransferase fibrillarin yes yes 3;4 5.994E-33 105.94 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 2 2 53046000 11760000 32721000 0 8565200 0 0 2659 862 2690 11744;11745;11746;11747;11748 7757;7758;7759;7760;7761 7761 5 GKGEAGNSDSMCLR KVLMQNQKGKGEAGNS NSDSMCLRSRKTKSQP K G K L R S 1 1 1 1 1 0 1 3 0 0 1 1 1 0 0 2 0 0 0 0 0 14 1 1480.6399 P46013;F5H4V4;P46013-2 P46013 3188 3201 MKI67 Antigen KI-67 no no 2;3 6.4618E-08 98.676 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 2 34608000 2117700 4950800 6273100 1532100 3208900 16525000 2660 919;920 2691 11749;11750;11751;11752;11753;11754;11755;11756;11757 7762;7763;7764;7765;7766;7767;7768 7764 7 GKGEGDLSQLSK FEPARGGRGKGEGDLS GDLSQLSKQYSSRDLP R G K S K Q 0 0 0 1 0 1 1 3 0 0 2 2 0 0 0 2 0 0 0 0 0 12 1 1217.6252 Q9P013 Q9P013 17 28 CWC15 Spliceosome-associated protein CWC15 homolog yes yes 3 3.2936E-27 124.12 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 2 1 15029000 3218200 1441900 2818000 915610 2073800 4561800 2661 1569 2692 11758;11759;11760;11761;11762;11763;11764;11765 7769;7770;7771;7772;7773;7774;7775;7776;7777 7772 9 GKGEITPAAIQK AFAAPRQRGKGEITPA ITPAAIQKMLDDNNHL R G K Q K M 2 0 0 0 0 1 1 2 0 2 0 2 0 0 1 0 1 0 0 0 0 12 1 1211.6874 Q15532-2;Q15532 Q15532-2 12 23 SS18 Protein SSXT yes no 2;3 0.0037491 68.515 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 2 2 6160400 0 638780 2056700 0 750640 2714200 2662 1140 2693 11766;11767;11768;11769;11770;11771;11772 7778;7779;7780 7780 3 GKPVGLVGVTELSDAQK LKGLGYEKGKPVGLVG TELSDAQKKQLKEQQE K G K Q K K 1 0 0 1 0 1 1 3 0 0 2 2 0 0 1 1 1 0 0 3 0 17 1 1696.9359 Q8IWZ8 Q8IWZ8 426 442 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 3 0.00028537 83.894 By matching By MS/MS By matching By matching By matching By matching 1 26732000 0 26732000 0 0 0 0 2663 1283 2694 11773 7781 7781 1 GKPVLELPERK RTKTSKIKGKPVLELP VLELPERKVFIQHITL K G K R K V 0 1 0 0 0 0 2 1 0 0 2 2 0 0 2 0 0 0 0 1 0 11 2 1264.7503 Q14527;Q14527-2;H7C5K0 Q14527 652 662 HLTF Helicase-like transcription factor yes no 3 0.021817 69.261 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5849700 0 957830 1055500 0 892120 2944300 2664 1107 2695 11774;11775;11776;11777 7782 7782 1 GKSMGVLFGGRSYMPSTHR SINVVYSRGKSMGVLF SYMPSTHRTTEKWNSV R G K H R T 0 2 0 0 0 0 0 4 1 0 1 1 2 1 1 3 1 0 1 1 0 19 2 2067.0142 P55895 P55895 149 167 RAG2 V(D)J recombination-activating protein 2 yes yes 2 0.0017264 51.798 By matching By matching By matching By matching By MS/MS By matching 1 260180000 0 0 0 0 260180000 0 2665 971 2696 11778 7783 7783 113;114 1 GLAGPAASYGPYTR PGAAAVVKGLAGPAAS ASYGPYTRVQSMALPP K G L T R V 3 1 0 0 0 0 0 3 0 0 1 0 0 0 2 1 1 0 2 0 0 14 0 1379.6834 P58012 P58012 247 260 FOXL2 Forkhead box protein L2 yes yes 2 0.00075548 86.498 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 27919000 0 5313800 2129800 787280 853130 18835000 2666 976 2697 11779;11780;11781;11782;11783 7784;7785 7784 2 GLDISNVK VATAVAARGLDISNVK GLDISNVKHVINFDLP R G L V K H 0 0 1 1 0 0 0 1 0 1 1 1 0 0 0 1 0 0 0 1 0 8 0 844.46543 O00571;O00571-2 O00571 504 511 DDX3X ATP-dependent RNA helicase DDX3X yes no 2 0.009371 101.33 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 18133000 750880 2302900 871330 658490 3440200 10109000 2667 693 2698 11784;11785;11786;11787;11788;11789 7786;7787 7787 2 GLDNTEFQGK EDAVEAIRGLDNTEFQ DNTEFQGKRMHVQLST R G L G K R 0 0 1 1 0 1 1 2 0 0 1 1 0 1 0 0 1 0 0 0 0 10 0 1107.5197 Q9BWF3;E9PB51;Q9BQ04;E7EQS3 Q9BWF3 130 139 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 2 0.022444 61.593 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1473900 0 0 729120 0 171230 573520 2668 1457 2699 11790;11791;11792 7788 7788 1 GLDSYEEKEDK RFKKSMVKGLDSYEEK SYEEKEDKVIKEMAAQ K G L D K V 0 0 0 2 0 0 3 1 0 0 1 2 0 0 0 1 0 0 1 0 0 11 1 1311.583 Q86UT8;E9PJ16 Q86UT8 136 146 CCDC84 Coiled-coil domain-containing protein 84 yes no 2;3 0.025416 59.418 By matching By matching By matching By matching By matching By MS/MS 1 1 2 1749800 0 132490 207650 0 0 1409600 2669 1263 2700 11793;11794;11795;11796 7789;7790 7789 2 GLDVEDVK IATDVASRGLDVEDVK GLDVEDVKFVINYDYP R G L V K F 0 0 0 2 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 2 0 8 0 873.44436 P17844;E7ETL9;Q92841-1;Q92841;Q92841-2;Q92841-3;H3BLZ8;Q59F66 Q92841-1 402 409 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 2 0.019592 80.219 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 24649000 1362100 4551300 1231600 651720 3104300 13748000 2670 1361;629;853 2701 11797;11798;11799;11800;11801;11802 7791 7791 1 GLEPSQSTAAKVPK KKKNKGKKGLEPSQST STAAKVPKKAKTWIPE K G L P K K 2 0 0 0 0 1 1 1 0 0 1 2 0 0 2 2 1 0 0 1 0 14 1 1411.7671 G3V529;Q9GZR7;F5H4J5 G3V529 119 132 DDX24 ATP-dependent RNA helicase DDX24 yes no 3 0.010381 50.897 By matching By matching By MS/MS By matching By matching By matching 1 1 2 1 6455200 809640 1754400 2378600 0 1512600 0 2671 588 2702 11803;11804;11805;11806;11807 7792 7792 1 GLESTTLADK FRCAKCGKGLESTTLA ESTTLADKDGEIYCKG K G L D K D 1 0 0 1 0 0 1 1 0 0 2 1 0 0 0 1 2 0 0 0 0 10 0 1033.5292 P21291;E9PND2;B3KVC9;E9PP21 P21291 152 161 CSRP1 Cysteine and glycine-rich protein 1 yes no 2 0.0026885 99.568 By matching By matching By matching By matching By MS/MS By matching 1 4585400 0 0 0 0 4585400 0 2672 859 2703 11808 7793 7793 1 GLESTTLADKDGEIYCK FRCAKCGKGLESTTLA KDGEIYCKGCYAKNFG K G L C K G 1 0 0 2 1 0 2 2 0 1 2 2 0 0 0 1 2 0 1 0 0 17 1 1898.8932 P21291;E9PND2;B3KVC9;E9PP21 P21291 152 168 CSRP1 Cysteine and glycine-rich protein 1 yes no 3 0.0014348 80.411 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 14701000 3373200 0 1091200 3226100 7010900 0 2673 859 2704 11809;11810;11811;11812 7794;7795;7796;7797;7798 7797 5 GLESTTLADKDGEIYCKGCYAK FRCAKCGKGLESTTLA YCKGCYAKNFGPKGFG K G L A K N 2 0 0 2 2 0 2 3 0 1 2 3 0 0 0 1 2 0 2 0 0 22 2 2478.1407 P21291;E9PND2;B3KVC9;E9PP21 P21291 152 173 CSRP1 Cysteine and glycine-rich protein 1 yes no 3;4 1.087E-09 87.676 By MS/MS By matching By matching By MS/MS By matching By matching 2 1 1 1 1 1 23994000 15092000 1224800 2156500 1817700 2616400 1086400 2674 859 2705 11813;11814;11815;11816;11817;11818;11819 7799;7800;7801;7802 7801 4 GLEVINDYHFR YKNIVLLKGLEVINDY VINDYHFRMVKSLLSN K G L F R M 0 1 1 1 0 0 1 1 1 1 1 0 0 1 0 0 0 0 1 1 0 11 0 1361.6728 Q16666-3;Q16666-2;Q16666;H3BLV7;E7EPR3;H3BM18;H3BVE6;Q6K0P9-6;Q6K0P9-5;Q6K0P9-4;Q6K0P9-3;Q6K0P9-2;Q6K0P9 Q16666-3 13 23 IFI16;PYHIN1 Gamma-interferon-inducible protein 16;Pyrin and HIN domain-containing protein 1 yes no 3 0.0034768 78.342 By matching By matching By matching By MS/MS By matching By matching 1 4011300 0 0 0 4011300 0 0 2675 1155 2706 11820 7803 7803 1 GLGGSGGAGGPPGTPYELAK DGAADASKGLGGSGGA GTPYELAKEDPQRYHL K G L A K E 2 0 0 0 0 0 1 8 0 0 2 1 0 0 3 1 1 0 1 0 0 20 0 1741.8635 Q9ULL5-3 Q9ULL5-3 673 692 PRR12 Proline-rich protein 12 yes yes 2 0.0072229 43.326 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2507600 0 762080 0 0 0 1745500 2676 1608 2707 11821;11822 7804;7805 7805 2 GLGHPPSSPLLK SPPGFSAKGLGHPPSS PPSSPLLKKTPLALAG K G L L K K 0 0 0 0 0 0 0 2 1 0 3 1 0 0 3 2 0 0 0 0 0 12 0 1201.6819 B7ZM82;B3KVH1;O95785 B7ZM82 157 168 WIZ Protein Wiz yes no 3 0.03559 43.501 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 12987000 0 1757500 2197000 1261400 3528400 4242300 2677 212 2708 11823;11824;11825;11826;11827 7806 7806 1 GLGLDESGLAK IASHSHVKGLGLDESG LDESGLAKQAASGLVG K G L A K Q 1 0 0 1 0 0 1 3 0 0 3 1 0 0 0 1 0 0 0 0 0 11 0 1058.5608 Q9Y265;Q9Y265-2 Q9Y265 23 33 RUVBL1 RuvB-like 1 yes no 2 0.0021961 88.596 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 74686000 16289000 13832000 8401400 6306500 16862000 12996000 2678 1629 2709 11828;11829;11830;11831;11832;11833 7807;7808;7809;7810;7811;7812;7813;7814 7812 7 GLGVGFGSGGGSSSSVK GFSASSGRGLGVGFGS GGSSSSVKFVSTTSSS R G L V K F 0 0 0 0 0 0 0 7 0 0 1 1 0 1 0 5 0 0 0 2 0 17 0 1438.7052 P13647;CON__P13647;E7EU87 P13647 560 576 KRT5 Keratin, type II cytoskeletal 5 yes no 2 0.00065679 72.428 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 5160000 0 603000 504240 2010600 1454100 588040 + 2679 299 2710 11834;11835;11836;11837;11838 7815 7815 1 GLHCPPPPGGPGAGK KPPVLGVRGLHCPPPP PGGPGAGKRLCAICGD R G L G K R 1 0 0 0 1 0 0 5 1 0 1 1 0 0 5 0 0 0 0 0 0 15 0 1397.6874 F8VZR5;F8VNP5;P28702;Q5STQ1;B7Z3E4 F8VZR5 49 63 RXRB Retinoic acid receptor RXR-beta yes no 3 0.0014539 67.997 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 5293600 213190 974130 0 472930 0 3633300 2680 533 2711 11839;11840;11841;11842 7816;7817 7816 2 GLIDGVVEADLVEALQEFGPISYVVVMPK ASPVVHIRGLIDGVVE SYVVVMPKKRQALVEF R G L P K K 2 0 0 2 0 1 3 3 0 2 3 1 1 1 2 1 0 0 1 6 0 29 0 3086.625 P14866;B4DPK8 P14866 108 136 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 3 3.5746E-29 83.879 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 56619000 36665000 8540600 7328500 0 4084700 0 2681 838 2712 11843;11844;11845;11846 7818;7819;7820;7821 7821 85 4 GLKDMGYGNWISKPQEEK TAKNYFKKGLKDMGYG ISKPQEEKNFYLCPV_ K G L E K N 0 0 1 1 0 1 2 3 0 1 1 3 1 0 1 1 0 1 1 0 0 18 2 2079.0095 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 1202 1219 ADAR Double-stranded RNA-specific adenosine deaminase no no 3;4 6.7631E-06 86.222 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 10261000 0 0 0 0 0 10261000 2682 352;968 2713 11847;11848 7822;7823 7822 2 GLLETTVQK ALLLCQNKGLLETTVQ LLETTVQKVARVKAPN K G L Q K V 0 0 0 0 0 1 1 1 0 0 2 1 0 0 0 0 2 0 0 1 0 9 0 987.56006 O43290;G3V1T2 O43290 649 657 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 2 0.007326 88.819 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 7628300 0 1289600 640640 520470 2732700 2444900 2683 713 2714 11849;11850;11851;11852;11853 7824;7825 7825 2 GLNSRLEATAASSVK ASLLGMRRGLNSRLEA ATAASSVKTRMQKLAE R G L V K T 3 1 1 0 0 0 1 1 0 0 2 1 0 0 0 3 1 0 0 1 0 15 1 1502.8053 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 129 143 ANLN Actin-binding protein anillin yes no 3 1.9879E-05 89.911 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 18317000 3127100 2299600 1399100 0 2150200 9341100 2684 1533 2715 11854;11855;11856;11857;11858 7826;7827;7828 7826 3 GLNSRLEATAASSVKTR ASLLGMRRGLNSRLEA AASSVKTRMQKLAEQR R G L T R M 3 2 1 0 0 0 1 1 0 0 2 1 0 0 0 3 2 0 0 1 0 17 2 1759.9541 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 129 145 ANLN Actin-binding protein anillin yes no 3 0.0050268 65.905 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 1 16878000 5223100 5291400 2805300 0 0 3558300 2685 1533 2716 11859;11860;11861;11862;11863 7829;7830;7831;7832;7833;7834 7831 6 GLPFGCSK NDGFVRLRGLPFGCSK GLPFGCSKEEIVQFFS R G L S K E 0 0 0 0 1 0 0 2 0 0 1 1 0 1 1 1 0 0 0 0 0 8 0 864.41637 D6RBM0;E9PCY7;P31943;G8JLB6;D6RIU0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E5RGV0;E5RGH4;H0YAQ2;P55795 D6RBM0 117 124 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H2, N-terminally processed no no 2 0.0066096 106.36 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 1 1 1 1 25596000 7244300 8152800 6926600 2627000 0 645490 2686 322;970 2717 11864;11865;11866;11867;11868;11869 7835;7836;7837;7838;7839 7838 5 GLPWQSSDQDVAR SETVVRARGLPWQSSD SSDQDVARFFKGLNVA R G L A R F 1 1 0 2 0 2 0 1 0 0 1 0 0 0 1 2 0 1 0 1 0 13 0 1457.6899 Q9H6T0-2;Q9H6T0 Q9H6T0-2 253 265 ESRP2 Epithelial splicing regulatory protein 2 yes no 2 0.0070898 58.595 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 8299300 0 1188800 0 0 0 7110500 2687 1498 2718 11870;11871 7840;7841 7841 2 GLPWSCSADEVQR EGFVVKVRGLPWSCSA CSADEVQRFFSDCKIQ R G L Q R F 1 1 0 1 1 1 1 1 0 0 1 0 0 0 1 2 0 1 0 1 0 13 0 1503.6776 D6RBM0;E9PCY7;P31943;G8JLB6;D6RIU0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E7EQJ0;E5RGV0;E7EN40;D6RDL0;D6RF17;D6R9D3 D6RBM0 17 29 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 2 8.172E-182 171.49 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 226320000 40702000 39133000 32660000 6497000 13145000 94185000 2688 322 2719 11872;11873;11874;11875;11876;11877 7842;7843;7844;7845;7846 7843 5 GLQTVHINENFAK KRLAADGRGLQTVHIN HINENFAKLAEALYIA R G L A K L 1 0 2 0 0 1 1 1 1 1 1 1 0 1 0 0 1 0 0 1 0 13 0 1469.7627 Q13573;G3V3A4;G3V4X8 Q13573 274 286 SNW1 SNW domain-containing protein 1 yes no 2;3 0.003651 63.292 By MS/MS By MS/MS By matching By matching By matching By MS/MS 2 1 2 14139000 3215500 3029100 0 0 0 7894900 2689 583 2720 11878;11879;11880;11881;11882 7847;7848;7849;7850 7848 4 GLRRPHCTVEEGVQK MISEESGKGLRRPHCT TVEEGVQKEEREKYRK K G L Q K E 0 2 0 0 1 1 2 2 1 0 1 1 0 0 1 0 1 0 0 2 0 15 2 1764.9053 B4DQ42;Q9HC62;C9IYB7 B4DQ42 186 200 SENP2 Sentrin-specific protease 2 yes no 3;4 0.00066954 70.54 By matching By MS/MS By matching By matching By matching By MS/MS 3 1 2 1 1 11421000 0 4263600 1356000 980860 1216600 3604000 2690 115 2721 11883;11884;11885;11886;11887;11888;11889;11890 7851;7852;7853 7851 3 GLSEAAGQTAQMLER EENEKLSRGLSEAAGQ QTAQMLERIILTEQAN R G L E R I 3 1 0 0 0 2 2 2 0 0 2 0 1 0 0 1 1 0 0 0 0 15 0 1560.7566 O95239;O95239-2 O95239 405 419 KIF4A Chromosome-associated kinesin KIF4A yes no 2 1.051E-08 99.069 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 46532000 0 25148000 0 0 0 21384000 2691 768 2722 11891;11892 7854;7855 7855 1 GLSGPSGPGHMASR ARWQGGERGLSGPSGP GPGHMASRGGVAGRGG R G L S R G 1 1 0 0 0 0 0 4 1 0 1 0 1 0 2 3 0 0 0 0 0 14 0 1309.6197 Q14151 Q14151 884 897 SAFB2 Scaffold attachment factor B2 yes yes 3 0.004229 56.569 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 4140300 0 731120 514810 0 0 2894400 2692 1097 2723 11893;11894;11895 7856;7857 7856 2 GLSNPSEVEVLR ILFNPDAKGLSNPSEV PSEVEVLREKVYASLE K G L L R E 0 1 1 0 0 0 2 1 0 0 2 0 0 0 1 2 0 0 0 2 0 12 0 1298.683 F8VZR5;F8VNP5;P28702;Q5STQ1;E9PK95 F8VZR5 309 320 RXRB Retinoic acid receptor RXR-beta yes no 2 0.0087986 60.161 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2 6598600 0 754250 430420 0 979440 4434500 2693 533 2724 11896;11897;11898;11899;11900 7858;7859;7860 7859 3 GLSNPSEVEVLREK ILFNPDAKGLSNPSEV EVEVLREKVYASLETY K G L E K V 0 1 1 0 0 0 3 1 0 0 2 1 0 0 1 2 0 0 0 2 0 14 1 1555.8206 F8VZR5;F8VNP5;P28702;Q5STQ1;E9PK95 F8VZR5 309 322 RXRB Retinoic acid receptor RXR-beta yes no 2 0.03727 47.622 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3300900 0 525540 310610 0 507630 1957100 2694 533 2725 11901;11902;11903;11904 7861 7861 1 GLSQSALPYRR GRMHAPGKGLSQSALP QSALPYRRSVPTWLKL K G L R R S 1 2 0 0 0 1 0 1 0 0 2 0 0 0 1 2 0 0 1 0 0 11 1 1246.6782 E9PS50;P62277 E9PS50 10 20 RPS13 40S ribosomal protein S13 yes no 3 0.01553 51.436 By MS/MS By matching By matching By matching By matching By matching 1 1618500 1618500 0 0 0 0 0 2695 471 2726 11905 7862 7862 1 GLTCESCHTTQSAQWYAWGPPNMQCR MNGAGFQKGLTCESCH GPPNMQCRLCASCWIY K G L C R L 2 1 1 0 3 3 1 2 1 0 1 0 1 0 2 2 3 2 1 0 0 26 0 3125.3001 O94776;Q68DB1 O94776 364 389 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 3 0.022218 30.499 By matching By matching By matching By matching By matching By MS/MS 1 5111600 0 0 0 0 0 5111600 2696 754 2727 11906 7863 7863 1 GLTDLSACK LHFHNLVKGLTDLSAC LTDLSACKAQLGLGHS K G L C K A 1 0 0 1 1 0 0 1 0 0 2 1 0 0 0 1 1 0 0 0 0 9 0 963.46953 O00567;Q5JXT2 O00567 135 143 NOP56 Nucleolar protein 56 yes no 2 0.014268 78.264 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 10095000 0 0 0 280190 3162000 6652700 2697 692 2728 11907;11908;11909 7864;7865 7864 2 GLTETGLYR CVNEIEQRGLTETGLY LTETGLYRISGCDRTV R G L Y R I 0 1 0 0 0 0 1 2 0 0 2 0 0 0 0 0 2 0 1 0 0 9 0 1008.524 Q9H0H5;H0YIK5 Q9H0H5 377 385 RACGAP1 Rac GTPase-activating protein 1 yes no 2 0.036278 61.691 By matching By MS/MS By matching By matching By matching By matching 1 1 2308900 0 1096800 0 0 1212100 0 2698 1479 2729 11910;11911 7866 7866 1 GLTTTGNSSLNSTSNTK SVATSSMKGLTTTGNS LNSTSNTKVSAVPTNM K G L T K V 0 0 3 0 0 0 0 2 0 0 2 1 0 0 0 4 5 0 0 0 0 17 0 1681.8119 Q96KR1;B5MEH6 Q96KR1 468 484 ZFR Zinc finger RNA-binding protein yes no 2 1.6389E-44 114.28 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 118240000 7341400 17245000 20050000 7689200 28285000 37627000 2699 1403 2730 11912;11913;11914;11915;11916;11917 7867;7868;7869;7870;7871;7872 7872 6 GLVQALQTK QEELQLCKGLVQALQT LVQALQTKVTQQGLKM K G L T K V 1 0 0 0 0 2 0 1 0 0 2 1 0 0 0 0 1 0 0 1 0 9 0 956.56548 P49327;F5H0D4 P49327 1143 1151 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 2 0.012404 81.525 By matching By matching By matching By matching By matching By MS/MS 1 1 3864800 0 824030 0 0 0 3040800 2700 934 2731 11918;11919 7873 7873 1 GLVRECLAETER KRGIIHARGLVRECLA ECLAETERNARS____ R G L E R N 1 2 0 0 1 0 3 1 0 0 2 0 0 0 0 0 1 0 0 1 0 12 1 1431.714 F5GYA4;O14519 F5GYA4 72 83 CDK2AP1 Cyclin-dependent kinase 2-associated protein 1 yes no 3 0.0018619 82.85 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 10605000 0 1648500 2021100 0 0 6935000 2701 495 2732 11920;11921;11922 7874;7875;7876 7875 3 GLVRECLAETERNAR KRGIIHARGLVRECLA AETERNARS_______ R G L A R S 2 3 1 0 1 0 3 1 0 0 2 0 0 0 0 0 1 0 0 1 0 15 2 1772.8952 F5GYA4;O14519 F5GYA4 72 86 CDK2AP1 Cyclin-dependent kinase 2-associated protein 1 yes no 3 0.011702 55.98 By matching By matching By matching By matching By matching By MS/MS 1 4613800 0 0 0 0 0 4613800 2702 495 2733 11923 7877 7877 1 GLVYSSNFQNVK ESRQGSIKGLVYSSNF SSNFQNVKQLYALVCE K G L V K Q 0 0 2 0 0 1 0 1 0 0 1 1 0 1 0 2 0 0 1 2 0 12 0 1354.6881 C9JJU9;Q96P11-2;G3V0G9;Q96P11;Q96P11-4 C9JJU9 23 34 NSUN5 Putative methyltransferase NSUN5 yes no 2 0.0087153 60.255 By matching By matching By matching By matching By matching By MS/MS 1 1353100 0 0 0 0 0 1353100 2703 255 2734 11924 7878 7878 1 GLYAAAAGVLAGVESR ________________ VLAGVESRQGSIKGLV M G L S R Q 5 1 0 0 0 0 1 3 0 0 2 0 0 0 0 1 0 0 1 2 0 16 0 1503.8045 C9JJU9;Q96P11-2;G3V0G9;Q96P11;Q96P11-4 C9JJU9 2 17 NSUN5 Putative methyltransferase NSUN5 yes no 2 2.8393E-19 106.6 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 36781000 30091000 0 0 0 0 6689200 2704 255 2735 11925;11926 7879;7880 7879 2 GMATCFAYGQTGSGK LVETIFERGMATCFAY YGQTGSGKTHTMGGDF R G M G K T 2 0 0 0 1 1 0 4 0 0 0 1 1 1 0 1 2 0 1 0 0 15 0 1534.6544 O00139-1;E9PB70;O00139;O00139-4;E9PD67;Q8N4N8;O00139-2 O00139-2 278 292 KIF2A;KIF2B Kinesin-like protein KIF2A;Kinesin-like protein KIF2B no no 2 0.0026215 62.861 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 6730400 487540 1267200 0 181380 1259300 3535000 2705 403;686 2736 11927;11928;11929;11930;11931 7881;7882 7881 2 GMGTVEGGDQSNPK EPEEELQKGMGTVEGG GGDQSNPKSKKEKKKS K G M P K S 0 0 1 1 0 1 1 4 0 0 0 1 1 0 1 1 1 0 0 1 0 14 0 1375.6038 Q13428-7;E7ETY2;Q13428-6;H0YA99;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 1425 1438 TCOF1 Treacle protein no no 2 1.9822E-228 173.59 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 10753000 1595300 1210900 1145600 662790 2713500 3425400 2706 1082;383 2737 11932;11933;11934;11935;11936;11937 7883;7884;7885;7886;7887;7888;7889;7890 7887 8 GMGTVEGGDQSNPKSK EPEEELQKGMGTVEGG DQSNPKSKKEKKKSDK K G M S K K 0 0 1 1 0 1 1 4 0 0 0 2 1 0 1 2 1 0 0 1 0 16 1 1590.7308 Q13428-7;E7ETY2;Q13428-6;H0YA99;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 1425 1440 TCOF1 Treacle protein no no 3 1.1819E-27 112.62 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 19113000 3625700 3125800 4698700 1876700 2684100 3102000 2707 1082;383 2738 11938;11939;11940;11941;11942;11943 7891;7892;7893;7894;7895;7896 7892 6 GMSDDPRYNQMK PMESMHEKGMSDDPRY DPRYNQMKGMGMRSGG K G M M K G 0 1 1 2 0 1 0 1 0 0 0 1 2 0 1 1 0 0 1 0 0 12 1 1440.6126 P51532-5;P51532-2;P51532-3;P51532-4;P51532;Q9HBD4;F5H0X5 P51532-5 83 94 SMARCA4 Transcription activator BRG1 yes no 2 0.033553 56.551 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 3042800 257700 277520 536370 0 745260 1226000 2708 952 2739 11944;11945;11946;11947;11948 7897 7897 1 GMYYGRDVNVCR DLKSLCSRGMYYGRDV GRDVNVCRCVNGKKKV R G M C R C 0 2 1 1 1 0 0 2 0 0 0 0 1 0 0 0 0 0 2 2 0 12 1 1488.6602 Q8IUF8-4;Q8IUF8;Q8IUF8-2;D6RCB6 Q8IUF8-4 93 104 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA yes no 3 0.0071518 62.166 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 24965000 251000 2964800 2983400 3528600 6711300 8525800 2709 1275 2740 11949;11950;11951;11952;11953;11954 7898;7899 7898 2 GNFCPLCDKCYDDDDYESK DCAKLFAKGNFCPLCD DDDDYESKMMQCGKCD K G N S K M 0 0 1 5 3 0 1 1 0 0 1 2 0 1 1 1 0 0 2 0 0 19 1 2399.8981 Q03164-2;Q03164;E9PQG7;H7BYJ6 Q03164-2 1528 1546 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 3 0.00089914 61.87 By MS/MS By matching By matching By matching By matching By matching 1 4286600 4286600 0 0 0 0 0 2710 464 2741 11955 7900 7900 1 GNFGGSFAGSFGGAGGHAPGVARK DRAIEMERGNFGGSFA HAPGVARKACQIFVRN R G N R K A 4 1 1 0 0 0 0 9 1 0 0 1 0 3 1 2 0 0 0 1 0 24 1 2162.0406 P52272-2;P52272;Q59ES8;F5H7Z1 P52272-2 589 612 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 3;4 1.8013E-07 61.276 By MS/MS By matching By matching By matching By MS/MS By matching 2 1 1 19672000 9743700 0 1617800 0 8310300 0 2711 956 2742 11956;11957;11958;11959 7901;7902;7903 7903 3 GNIAQMYHAPGKK GRKFVVTKGNIAQMYH MYHAPGKKREFNAFVL K G N K K R 2 0 1 0 0 1 0 2 1 1 0 2 1 0 1 0 0 0 1 0 0 13 1 1413.7187 Q15269 Q15269 116 128 PWP2 Periodic tryptophan protein 2 homolog yes yes 3 0.0011548 70.728 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 2 1 5180300 0 0 735140 0 1623500 2821700 2712 1134 2743 11960;11961;11962;11963 7904;7905;7906;7907 7906 4 GNIWSAEK CLRGRFDKGNIWSAEK GNIWSAEKGGNSKSKQ K G N E K G 1 0 1 0 0 0 1 1 0 1 0 1 0 0 0 1 0 1 0 0 0 8 0 903.44503 Q9NQW6;Q9NQW6-2 Q9NQW6 445 452 ANLN Actin-binding protein anillin yes no 2 0.015392 85.161 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 9151000 768060 1652100 0 436780 1300600 4993500 2713 1533 2744 11964;11965;11966;11967;11968 7908;7909 7909 2 GNIWSAEKGGNSK CLRGRFDKGNIWSAEK AEKGGNSKSKQLETKQ K G N S K S 1 0 2 0 0 0 1 3 0 1 0 2 0 0 0 2 0 1 0 0 0 13 1 1346.6579 Q9NQW6;Q9NQW6-2 Q9NQW6 445 457 ANLN Actin-binding protein anillin yes no 2;3 0.022254 57.034 By matching By matching By MS/MS By matching By matching By matching 2 1966000 0 0 1966000 0 0 0 2714 1533 2745 11969;11970 7910;7911 7910 2 GNLGAGNGNLQGPR GGPAVGPRGNLGAGNG NGNLQGPRHMQKGRVE R G N P R H 1 1 3 0 0 1 0 5 0 0 2 0 0 0 1 0 0 0 0 0 0 14 0 1323.6644 P43243;A8MXP9;D6REM6;D6R991;H0Y8T4;B3KM87;P43243-2;D6RAM9;D6RAY2;D6RBI2;D6RE02;D6RIA2 P43243 374 387 MATR3 Matrin-3 yes no 2 0.0014867 69.03 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 18233000 0 2246200 1688500 1162900 3138100 9997300 2715 52 2746 11971;11972;11973;11974;11975 7912;7913;7914;7915 7915 4 GNLGAGNGNLQGPRHMQK GGPAVGPRGNLGAGNG QGPRHMQKGRVETSRV R G N Q K G 1 1 3 0 0 2 0 5 1 0 2 1 1 0 1 0 0 0 0 0 0 18 1 1847.9173 P43243;A8MXP9;D6REM6;D6R991;H0Y8T4;B3KM87;P43243-2;D6RAM9;D6RAY2;D6RBI2;D6RE02;D6RIA2 P43243 374 391 MATR3 Matrin-3 yes no 3 0.00059475 70.197 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 8893600 0 1391900 244670 632230 2281900 4343000 2716 52 2747 11976;11977;11978;11979;11980 7916;7917;7918 7916 3 GNLYSFGCPEYGQLGHNSDGK FSMIMDCKGNLYSFGC LGHNSDGKFIARAQRI K G N G K F 0 0 2 1 1 1 1 5 1 0 2 1 0 1 1 2 0 0 2 0 0 21 0 2298.9964 Q9P258 Q9P258 273 293 RCC2 Protein RCC2 yes yes 3 0.0089587 40.384 By MS/MS By matching By matching By matching By matching By matching 1 5315800 5315800 0 0 0 0 0 2717 1575 2748 11981 7919 7919 1 GNTAEGCVHETQEKQK LYLLRVLKGNTAEGCV HETQEKQKAGTDPSHM K G N Q K A 1 0 1 0 1 2 3 2 1 0 0 2 0 0 0 0 2 0 0 1 0 16 1 1814.8217 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 856 871 MYBBP1A Myb-binding protein 1A yes no 3 0.0095787 45.722 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1621000 0 0 870490 141920 142340 466220 2718 682 2749 11982;11983;11984;11985 7920 7920 1 GNTLKNIEKECNAK VGLLIGPRGNTLKNIE IEKECNAKIMIRGKGS R G N A K I 1 0 3 0 1 0 2 1 0 1 1 3 0 0 0 0 1 0 0 0 0 14 2 1617.8145 Q15637-6;Q15637-4;Q15637-3;Q15637-2;Q15637 Q15637-6 161 174 SF1 Splicing factor 1 no no 3 0.012107 58.595 By matching By matching By matching By MS/MS By matching By matching 1 2287400 0 0 0 2287400 0 0 2719 1141 2750 11986 7921 7921 1 GNVFSSPTAAGTPNKETAGLK NIKSMWEKGNVFSSPT NKETAGLKVGVSSRIN K G N L K V 3 0 2 0 0 0 1 3 0 0 1 2 0 1 2 2 3 0 0 1 0 21 1 2046.0382 Q05682-5;E9PGZ1;Q05682-4;F5H1Z9;E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;E7EUR9 Q05682-5 458 478 CALD1 Caldesmon yes no 3 2.6763E-09 85.087 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 8938300 0 2516400 2088100 0 1454400 2879300 2720 396 2751 11987;11988;11989;11990 7922;7923 7923 2 GPAPAGEQLR ________________ APAGEQLRGATGEPEV M G P L R G 2 1 0 0 0 1 1 2 0 0 1 0 0 0 2 0 0 0 0 0 0 10 0 994.51959 Q9H6R4-4;Q9H6R4;Q9H6R4-2;G8JLK7;Q9H6R4-3 Q9H6R4-4 2 11 NOL6 Nucleolar protein 6 yes no 2 0.022964 61.161 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2761800 0 794670 0 219520 0 1747700 2721 1497 2752 11991;11992;11993 7924 7924 1 GPAPAGEQLRGATGEPEVMEPALEGTGK ________________ PALEGTGKEGKKASSR M G P G K E 4 1 0 0 0 1 5 6 0 0 2 1 1 0 4 0 2 0 0 1 0 28 1 2748.3389 Q9H6R4-4;Q9H6R4;Q9H6R4-2;G8JLK7;Q9H6R4-3 Q9H6R4-4 2 29 NOL6 Nucleolar protein 6 yes no 3 4.4782E-48 97.059 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 1 2 1 206050000 0 113410000 16756000 56519000 0 19361000 2722 1497 2753;2754 11994;11995;11996;11997;11998;11999 7925;7926;7927;7928 7925 171 3 GPAPAGEQLRGATGEPEVMEPALEGTGKEGK ________________ EGTGKEGKKASSRKRT M G P G K K 4 1 0 0 0 1 6 7 0 0 2 2 1 0 4 0 2 0 0 1 0 31 2 3062.4979 Q9H6R4-4;Q9H6R4;Q9H6R4-2;G8JLK7;Q9H6R4-3 Q9H6R4-4 2 32 NOL6 Nucleolar protein 6 yes no 4 1.8949E-27 74.392 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 36106000 22055000 1951800 0 12099000 0 0 2723 1497 2755 12000;12001;12002 7929;7930 7930 2 GPASVPSVGK QNSTVLARGPASVPSV ASVPSVGKAVATAAQA R G P G K A 1 0 0 0 0 0 0 2 0 0 0 1 0 0 2 2 0 0 0 2 0 10 0 897.49198 Q13428-7;E7ETY2;Q13428-6;Q13428-5;H0YAB7;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 843 852 TCOF1 Treacle protein no no 2 0.024284 60.064 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 2 1 7823500 0 0 1298300 866200 5494600 164410 2724 1082;383 2756 12003;12004;12005;12006;12007 7931;7932 7932 2 GPLEPSEPAVVAAAR DEAVWLERGPLEPSEP PAVVAAARVGVGHAGE R G P A R V 4 1 0 0 0 0 2 1 0 0 1 0 0 0 3 1 0 0 0 2 0 15 0 1462.778 G5E9E2;Q5J9I4;P29372-2;P29372;A2IDA3 G5E9E2 230 244 MPG DNA-3-methyladenine glycosylase yes no 2 2.0509E-70 134.06 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 151020000 27475000 10464000 23024000 2971100 1937900 85144000 2725 594 2757 12008;12009;12010;12011;12012;12013 7933;7934;7935;7936;7937 7934 5 GPLLVSTESHPVK VSAALALKGPLLVSTE STESHPVKSGIHKWIS K G P V K S 0 0 0 0 0 0 1 1 1 0 2 1 0 0 2 2 1 0 0 2 0 13 0 1362.7507 Q9Y3A4 Q9Y3A4 137 149 RRP7A Ribosomal RNA-processing protein 7 homolog A yes yes 3 0.0088816 54.871 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3624600 433860 0 0 0 257930 2932800 2726 1643 2758 12014;12015;12016 7938 7938 1 GPPDFSSDEEREPTPVLGSGAAAAGR LPAGTNSKGPPDFSSD SGAAAAGRSRAAVGRK K G P G R S 4 2 0 2 0 0 3 4 0 0 1 0 0 1 4 3 1 0 0 1 0 26 1 2569.2045 P42166;P42167;P42167-2;G5E972 P42166 61 86 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 3 3.8301E-05 57.152 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 14701000 3932900 0 4318100 0 0 6450300 2727 913;914 2759 12017;12018;12019 7939;7940;7941 7940 3 GPSSVEDIKAK EKTPKTPKGPSSVEDI SVEDIKAKMQASIEKG K G P A K M 1 0 0 1 0 0 1 1 0 1 0 2 0 0 1 2 0 0 0 1 0 11 1 1129.5979 P06748-2;P06748;P06748-3 P06748-2 211 221 NPM1 Nucleophosmin yes no 2 2.112E-07 108.9 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 9808900 2520400 0 1709200 484870 1963600 3130800 2728 801 2760 12020;12021;12022;12023;12024 7942;7943 7942 2 GQEEVEMPSKEK RNEKKNQKGQEEVEMP VEMPSKEKQQPQKPQA K G Q E K Q 0 0 0 0 0 1 4 1 0 0 0 2 1 0 1 1 0 0 0 1 0 12 1 1389.6446 Q14690 Q14690 1446 1457 PDCD11 Protein RRP5 homolog yes yes 2 0.030494 57.52 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 2361200 340500 540430 414530 0 0 1065800 2729 1112 2761 12025;12026;12027;12028 7944;7945 7945 2 GQGALDPNGTRVR RAAFLEAKGQGALDPN DPNGTRVRHGSGPPSS K G Q V R H 1 2 1 1 0 1 0 3 0 0 1 0 0 0 1 0 1 0 0 1 0 13 1 1339.6957 Q9HC52 Q9HC52 296 308 CBX8 Chromobox protein homolog 8 yes yes 3 0.0024035 65.179 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 7761500 562200 1391500 920080 356010 1208800 3322800 2730 1519 2762 12029;12030;12031;12032;12033;12034 7946 7946 1 GQNLLQTQDHAKAPK ELMKDTARGQNLLQTQ QDHAKAPKSEKGKITK R G Q P K S 2 0 1 1 0 3 0 1 1 0 2 2 0 0 1 0 1 0 0 0 0 15 1 1647.8693 P46013;F5H4V4;P46013-2 P46013 982 996 MKI67 Antigen KI-67 no no 3;4 1.627E-08 98 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 2 2 79923000 14023000 10558000 9836900 4609700 16734000 24161000 2731 919;920 2763 12035;12036;12037;12038;12039;12040;12041;12042;12043;12044;12045;12046;12047;12048 7947;7948;7949;7950;7951;7952;7953;7954;7955;7956;7957;7958;7959;7960;7961;7962 7955 16 GQPIYIQFSNHK TSVTPVLRGQPIYIQF YIQFSNHKELKTDSSP R G Q H K E 0 0 1 0 0 2 0 1 1 2 0 1 0 1 1 1 0 0 1 0 0 12 0 1430.7306 P26599;P26599-2;P26599-3 P26599 123 134 PTBP1 Polypyrimidine tract-binding protein 1 yes no 2;3 7.57E-118 158.06 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 102690000 14021000 27404000 22110000 7198100 8108700 23844000 2732 882 2764 12049;12050;12051;12052;12053;12054;12055;12056;12057;12058;12059 7963;7964;7965;7966;7967;7968;7969;7970;7971 7964 9 GQPIYIQFSNHKELK TSVTPVLRGQPIYIQF FSNHKELKTDSSPNQA R G Q L K T 0 0 1 0 0 2 1 1 1 2 1 2 0 1 1 1 0 0 1 0 0 15 1 1800.9523 P26599;P26599-2;P26599-3 P26599 123 137 PTBP1 Polypyrimidine tract-binding protein 1 yes no 3;4 0.001275 69.258 By matching By MS/MS By matching By MS/MS By matching By MS/MS 2 1 2 6373900 0 2282400 0 499330 0 3592200 2733 882 2765 12060;12061;12062;12063;12064 7972;7973;7974;7975;7976 7976 5 GQPRGGVEEGPTVLRK IIGAPFSKGQPRGGVE EGPTVLRKAGLLEKLK K G Q R K A 0 2 0 0 0 1 2 4 0 0 1 1 0 0 2 0 1 0 0 2 0 16 2 1678.9115 P05089-3;P05089;P05089-2 P05089-3 18 33 ARG1 Arginase-1 yes no 3 0.009018 62.69 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 6007400 627500 237890 1406400 765060 617850 2352600 2734 793 2766 12065;12066;12067;12068;12069;12070 7977;7978 7977 2 GQSINVHTPNSQK GPLDFSTKGQSINVHT VHTPNSQKVDSQKAAT K G Q Q K V 0 0 2 0 0 2 0 1 1 1 0 1 0 0 1 2 1 0 0 1 0 13 0 1408.7059 Q86Y07-4;Q86Y07-3;Q86Y07;Q86Y07-5;Q86Y07-2;E9PFA9 Q86Y07-4 211 223 VRK2 Serine/threonine-protein kinase VRK2 yes no 3 0.038239 40.373 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 3023500 0 1143300 813470 208960 857790 0 2735 1271 2767 12071;12072;12073;12074 7979 7979 1 GQSPAGDGSPEPPTPR NVRSAWYRGQSPAGDG SPEPPTPRYNTWVLQD R G Q P R Y 1 1 0 1 0 1 1 3 0 0 0 0 0 0 5 2 1 0 0 0 0 16 0 1548.7168 Q9H6R4-4;Q9H6R4;Q9H6R4-2;G8JLK7;Q9H6R4-3 Q9H6R4-4 281 296 NOL6 Nucleolar protein 6 yes no 2 0.01354 43.37 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3075100 0 790110 291780 0 533100 1460100 2736 1497 2768 12075;12076;12077;12078 7980 7980 1 GQTVNEDSMDVK ________________ NEDSMDVKKENQEKTP M G Q V K K 0 0 1 2 0 1 1 1 0 0 0 1 1 0 0 1 1 0 0 2 0 12 0 1321.582 B4DZR9;Q9UQR0 B4DZR9 2 13 SCML2 Sex comb on midleg-like protein 2 yes no 2 3.9679E-12 110.31 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 15275000 2046200 1615600 2591100 1340500 2468100 5213800 2737 149 2769 12079;12080;12081;12082;12083;12084;12085 7981;7982;7983;7984;7985;7986;7987 7984 6 GQTVNEDSMDVKK ________________ EDSMDVKKENQEKTPQ M G Q K K E 0 0 1 2 0 1 1 1 0 0 0 2 1 0 0 1 1 0 0 2 0 13 1 1449.677 B4DZR9;Q9UQR0 B4DZR9 2 14 SCML2 Sex comb on midleg-like protein 2 yes no 2;3 1.4381E-09 104.17 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 13281000 1586400 1290000 2633600 1560100 2432700 3778500 2738 149 2770 12086;12087;12088;12089;12090;12091;12092;12093;12094;12095;12096;12097 7988;7989;7990;7991;7992;7993;7994;7995 7990 8 GQWDCSVCCVQNESSSLK FEGMFIRKGQWDCSVC QNESSSLKCVACDASK K G Q L K C 0 0 1 1 3 2 1 1 0 0 1 1 0 0 0 4 0 1 0 2 0 18 0 2142.8769 P49792 P49792 1783 1800 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 2 1.4195E-155 149.47 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 18975000 0 4850900 0 2697700 0 11426000 2739 945 2771 12098;12099;12100 7996;7997 7996 2 GQYHTLQAGFSSR ETARGTSRGQYHTLQA LQAGFSSRSQGLSGDK R G Q S R S 1 1 0 0 0 2 0 2 1 0 1 0 0 1 0 2 1 0 1 0 0 13 0 1450.6953 Q9Y446;E9PK71 Q9Y446 82 94 PKP3 Plakophilin-3 yes no 3 0.0024239 64.374 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 11015000 0 1907600 1394300 988720 1614300 5109700 2740 1650 2772 12101;12102;12103;12104;12105 7998;7999;8000;8001;8002 7999 5 GRDVESVQTPSK ELDQNKGKGRDVESVQ ESVQTPSKAVGASFPL K G R S K A 0 1 0 1 0 1 1 1 0 0 0 1 0 0 1 2 1 0 0 2 0 12 1 1301.6575 P46013;F5H4V4 P46013 320 331 MKI67 Antigen KI-67 yes no 3 0.00011429 98.337 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1962300 0 712410 0 186230 0 1063700 2741 919 2773 12106;12107;12108 8003;8004;8005;8006 8004 4 GRFPESSAVQSSSFERR NDFDHRERGRFPESSA QSSSFERRDRFVGQSE R G R R R D 1 3 0 0 0 1 2 1 0 0 0 0 0 2 1 5 0 0 0 1 0 17 2 1925.9344 Q9NWH9;H7C3F4;A8K5V8;H0YMM0 Q9NWH9 777 793 SLTM SAFB-like transcription modulator yes no 4 0.0021092 53.395 By MS/MS By matching By matching By matching By matching By matching 1 1 1 4853700 2173900 1122900 0 1556900 0 0 2742 1554 2774 12109;12110;12111 8007 8007 1 GRGGGGGGFRGFSSGSAVVSGGSR CQISCKSRGRGGGGGG AVVSGGSRRSTSSFSC R G R S R R 1 3 0 0 0 0 0 11 0 0 0 0 0 2 0 5 0 0 0 2 0 24 2 2112.0209 P35908;CON__P35908 P35908 11 34 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 4 0.035378 30 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 6625600 0 960460 2420700 1491300 0 1753100 + 2743 302 2775 12112;12113;12114;12115 8008 8008 1 GRGGPPGQFHDNANGGQNGTVQEIMIPAGK MLDDIVSRGRGGPPGQ EIMIPAGKAGLVIGKG R G R G K A 2 1 3 1 0 3 1 8 1 2 0 1 1 1 3 0 1 0 0 1 0 30 1 3003.4369 Q92945-2;Q92945;E7EP96 Q92945-2 215 244 KHSRP Far upstream element-binding protein 2 yes no 3;4 3.6193E-77 108.3 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 3 673130000 116600000 31135000 109570000 19258000 27674000 368890000 2744 1366 2776;2777 12116;12117;12118;12119;12120;12121;12122;12123;12124;12125;12126;12127 8009;8010;8011;8012;8013;8014;8015;8016;8017;8018 8017 156 10 GRIVETEAYLGPEDEAAHSR LPNGTELRGRIVETEA EDEAAHSRGGRQTPRN R G R S R G 3 2 0 1 0 0 4 2 1 1 1 0 0 0 1 1 1 0 1 1 0 20 1 2199.0556 G5E9E2;Q5J9I4;P29372-2;P29372;A2IDA3 G5E9E2 102 121 MPG DNA-3-methyladenine glycosylase yes no 3;4 0.00019382 64.377 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 2 6068300 1041500 0 0 0 0 5026800 2745 594 2778 12128;12129;12130;12131;12132 8019;8020;8021;8022 8019 4 GRIVETEAYLGPEDEAAHSRGGR LPNGTELRGRIVETEA AAHSRGGRQTPRNRGM R G R G R Q 3 3 0 1 0 0 4 4 1 1 1 0 0 0 1 1 1 0 1 1 0 23 2 2469.1997 G5E9E2;Q5J9I4;P29372-2;P29372;A2IDA3 G5E9E2 102 124 MPG DNA-3-methyladenine glycosylase yes no 4 0.00043541 54.857 By matching By matching By matching By matching By matching By MS/MS 1 1 5164200 0 0 0 0 920570 4243600 2746 594 2779 12133;12134 8023;8024;8025 8025 3 GRRDLAGAPPGEVVGCFTPQSR ALQRLEGRGRRDLAGA GCFTPQSRRLRELPLA R G R S R R 2 3 0 1 1 1 1 4 0 0 1 0 0 1 3 1 1 0 0 2 0 22 2 2326.16 Q9Y446 Q9Y446 554 575 PKP3 Plakophilin-3 yes yes 4 4.2527E-06 69.986 By matching By matching By matching By matching By matching By MS/MS 1 3831400 0 0 0 0 0 3831400 2747 1650 2780 12135 8026 8026 1 GRSSFYPDGGDQETAK NAPRDESRGRSSFYPD GGDQETAKTGKFLKRF R G R A K T 1 1 0 2 0 1 1 3 0 0 0 1 0 1 1 2 1 0 1 0 0 16 1 1713.7594 Q9NYF8-2;Q9NYF8;Q9NYF8-4;E9PK09;E9PQN2;E9PKI6;E9PJA7;H0YF00;Q9NYF8-3;E9PK91 Q9NYF8-2 315 330 BCLAF1 Bcl-2-associated transcription factor 1 no no 2;3 1.5131E-05 88.951 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 58479000 6801100 10842000 9433900 11654000 6988900 12758000 2748 1563;452 2781 12136;12137;12138;12139;12140;12141;12142 8027;8028;8029;8030;8031;8032;8033 8030 7 GSAFAIGSDGLCCQSR WQMNPYDRGSAFAIGS DGLCCQSREVKEWHGC R G S S R E 2 1 0 1 2 1 0 3 0 1 1 0 0 1 0 3 0 0 0 0 0 16 0 1684.7297 Q92499 Q92499 99 114 DDX1 ATP-dependent RNA helicase DDX1 yes yes 2 0.0057343 48.623 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 4028100 0 1909800 0 0 0 2118200 2749 1348 2782 12143;12144 8034;8035 8035 2 GSALGTPAAAEPVTPTSK PHKEEAGKGSALGTPA EPVTPTSKAGSGAPGG K G S S K A 4 0 0 0 0 0 1 2 0 0 1 1 0 0 3 2 3 0 0 1 0 18 0 1653.8574 H7C1H8;P00519;P00519-2 H7C1H8 654 671 ABL1 Tyrosine-protein kinase ABL1 yes no 2 0.0046292 47.222 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2882900 0 871670 617510 0 0 1393700 2750 666 2783 12145;12146;12147 8036;8037 8036 2 GSATTPRGVLHTFSPSPK QASSQLSRGSATTPRG HTFSPSPKLQNSASAT R G S P K L 1 1 0 0 0 0 0 2 1 0 1 1 0 1 3 3 3 0 0 1 0 18 1 1838.9639 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7;F5H7D9;H7C3H1 Q86YP4 533 550 GATAD2A Transcriptional repressor p66-alpha yes no 4 0.019654 38.996 By matching By MS/MS By matching By matching By matching By matching 1 1 1 18324000 0 5179800 5816600 0 0 7327400 2751 170 2784 12148;12149;12150 8038 8038 1 GSAVATSHFEVGNTCPSEFPSK ETVHPFRRGSAVATSH CPSEFPSKSITFTSRS R G S S K S 2 0 1 0 1 0 2 2 1 0 0 1 0 2 2 4 2 0 0 2 0 22 0 2308.043 Q92576-2;Q92576 Q92576-2 1669 1690 PHF3 PHD finger protein 3 yes no 3 6.9804E-134 138.04 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 1 17360000 0 1700600 0 582900 0 15077000 2752 1353 2785 12151;12152;12153;12154 8039;8040;8041;8042 8040 4 GSAYGLSGADSYK KGAGLGAKGSAYGLSG LSGADSYKDAVRKAMF K G S Y K D 2 0 0 1 0 0 0 3 0 0 1 1 0 0 0 3 0 0 2 0 0 13 0 1274.5779 Q59HE6;H0YGC0;P52756 Q59HE6 478 490 RBM5 RNA-binding protein 5 yes no 2 0.032596 43.761 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6359900 992170 1320800 0 0 1370700 2676200 2753 620 2786 12155;12156;12157;12158 8043 8043 1 GSAYGLSGADSYKDAVRK KGAGLGAKGSAYGLSG SYKDAVRKAMFARFTE K G S R K A 3 1 0 2 0 0 0 3 0 0 1 2 0 0 0 3 0 0 2 1 0 18 2 1843.9064 Q59HE6;H0YGC0;P52756 Q59HE6 478 495 RBM5 RNA-binding protein 5 yes no 3 0.010081 50.252 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 10723000 0 2895900 2438000 0 2114600 3274000 2754 620 2787 12159;12160;12161;12162 8044;8045 8044 2 GSAYLEAGGTK AGLLSQAKGSAYLEAG YLEAGGTKVLCAVSGP K G S T K V 2 0 0 0 0 0 1 3 0 0 1 1 0 0 0 1 1 0 1 0 0 11 0 1052.5138 Q5RKV6 Q5RKV6 51 61 EXOSC6 Exosome complex component MTR3 yes yes 2 0.0069874 69.261 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1644300 0 876200 0 239860 0 528210 2755 1185 2788 12163;12164;12165 8046;8047 8047 2 GSDRDGGADGMSAECECNIK GQYALAVRGSDRDGGA AECECNIKILDVNDNI R G S I K I 2 1 1 3 2 0 2 4 0 1 0 1 1 0 0 2 0 0 0 0 0 20 1 2127.8256 Q02413 Q02413 239 258 DSG1 Desmoglein-1 yes yes 3 0.016156 38.736 By matching By matching By MS/MS By matching By matching By matching 1 1 1758800 0 828470 930280 0 0 0 2756 1033 2789 12166;12167 8048 8048 1 GSEFMFEKAPAHHPAAISTAK HGVCSVLKGSEFMFEK PAAISTAKFCIQEIEK K G S A K F 5 0 0 0 0 0 2 1 2 1 0 2 1 2 2 2 1 0 0 0 0 21 1 2226.0892 Q5JTH9-2;E9PCK7;Q5JTH9 Q5JTH9-2 166 186 RRP12 RRP12-like protein yes no 3;4 0.013498 39.349 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2 15935000 0 2058200 0 0 4013400 9863100 2757 414 2790 12168;12169;12170;12171 8049;8050;8051 8051 3 GSEHQAIVQHLEK RKARKLRKGSEHQAIV AIVQHLEKSFAIASLV K G S E K S 1 0 0 0 0 2 2 1 2 1 1 1 0 0 0 1 0 0 0 1 0 13 0 1474.7528 Q14690;F5H7X0 Q14690 925 937 PDCD11 Protein RRP5 homolog yes no 3 0.0018602 67.019 By matching By matching By matching By matching By MS/MS By matching 1 1 2369600 0 884030 0 0 1485600 0 2758 1112 2791 12172;12173 8052 8052 1 GSFSDTGLGDGK DKEKIKEKGSFSDTGL DTGLGDGKMKSDSFAP K G S G K M 0 0 0 2 0 0 0 4 0 0 1 1 0 1 0 2 1 0 0 0 0 12 0 1139.5095 Q9Y2W1 Q9Y2W1 376 387 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 0.018667 52.576 By matching By matching By MS/MS By matching By matching By matching 1 1 1 6087100 0 1406400 2237300 0 2443500 0 2759 1639 2792 12174;12175;12176 8053 8053 1 GSFSDTGLGDGKMK DKEKIKEKGSFSDTGL GLGDGKMKSDSFAPKT K G S M K S 0 0 0 2 0 0 0 4 0 0 1 2 1 1 0 2 1 0 0 0 0 14 1 1398.6449 Q9Y2W1 Q9Y2W1 376 389 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2;3 0.0010705 87.363 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 3 2 50454000 8244900 3932800 9139500 7699900 9849000 11588000 2760 1639 2793 12177;12178;12179;12180;12181;12182;12183;12184;12185;12186;12187;12188;12189;12190 8054;8055;8056;8057;8058;8059;8060;8061;8062 8060 9 GSFVNGVFEVHKK NQLCSQTKGSFVNGVF GVFEVHKKNVRGEFTY K G S K K N 0 0 1 0 0 0 1 2 1 0 0 2 0 2 0 1 0 0 0 3 0 13 1 1446.7619 Q16666-3;Q16666-2;Q16666;H3BLV7;E7EPR3 Q16666-3 572 584 IFI16 Gamma-interferon-inducible protein 16 yes no 2;3 0.013387 61.409 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 4575700 0 898200 627770 0 1923300 1126500 2761 1155 2794 12191;12192;12193;12194 8063;8064;8065 8063 3 GSGGLGGACGGAGFGSR SVSVSRSRGSGGLGGA GGAGFGSRSLYGLGGS R G S S R S 2 1 0 0 1 0 0 9 0 0 1 0 0 1 0 2 0 0 0 0 0 17 0 1423.6263 P02538;CON__P02538;P04259;CON__P04259;F5H6G5 P02538 43 59 KRT6A;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6B no no 2 2.511E-58 123.08 By MS/MS By matching By matching By matching By MS/MS By MS/MS 2 1 1 1 1 1 57368000 6392200 8384700 5501900 19501000 10988000 6600500 + 2762 287;788 2795 12195;12196;12197;12198;12199;12200;12201 8066;8067;8068 8068 3 GSGGLGGACGGAGFGSRSLYGLGGSK SVSVSRSRGSGGLGGA LYGLGGSKRISIGGGS R G S S K R 2 1 0 0 1 0 0 12 0 0 3 1 0 1 0 4 0 0 1 0 0 26 1 2286.0811 P02538;CON__P02538;P04259;CON__P04259;F5H6G5 P02538 43 68 KRT6A;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6B no no 3 5.0852E-29 93.416 By matching By matching By matching By MS/MS By matching By matching 1 12667000 0 0 0 12667000 0 0 + 2763 287;788 2796 12202 8069 8069 1 GSGIFDESTPVQTR RTNPPGGKGSGIFDES ESTPVQTRQHLNPPGG K G S T R Q 0 1 0 1 0 1 1 2 0 1 0 0 0 1 1 2 2 0 0 1 0 14 0 1492.7158 Q9H910;B4DLH4;H3BU16;Q9H910-2;A6NGP5;H3BMV3;B4DL85;H3BMT0;H3BTV5 Q9H910 68 81 HN1L Hematological and neurological expressed 1-like protein yes no 2 0.0056126 55.66 By matching By MS/MS By matching By matching By matching By matching 2 1 3840100 0 2792600 0 0 0 1047600 2764 98 2797 12203;12204;12205 8070 8070 1 GSGSGQSPSSGQHGTGFGR QSPGHGQRGSGSGQSP QHGTGFGRSSSSGPYV R G S G R S 0 1 0 0 0 2 0 7 1 0 0 0 0 1 1 5 1 0 0 0 0 19 0 1746.767 Q86YZ3;CON__Q86YZ3 Q86YZ3 430 448 HRNR Hornerin yes no 3 0.019452 36.127 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3725600 0 0 2141000 685550 0 899040 + 2765 308 2798 12206;12207;12208 8071 8071 1 GSKDHNIRAQEPESGLSEETQVK RDYVAVARGSKDHNIR LSEETQVKCLMDQATD R G S V K C 1 1 1 1 0 2 4 2 1 1 1 2 0 0 1 3 1 0 0 1 0 23 2 2538.231 P78527;E7EUY0;P78527-2 P78527 4083 4105 PRKDC DNA-dependent protein kinase catalytic subunit yes no 4 0.0044044 44.054 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 48032000 11264000 5889300 9724600 6264900 9938900 4950400 2766 1012 2799 12209;12210;12211;12212;12213;12214 8072;8073;8074;8075 8074 4 GSKPGGVGTGLGGSSGTETLEK MGGLMHSKGSKPGGVG SGTETLEKKKKNSLKS K G S E K K 0 0 0 0 0 0 2 8 0 0 2 2 0 0 1 3 3 0 0 1 0 22 1 1974.9858 F5H4P2;Q6GQQ9 F5H4P2 529 550 OTUD7B OTU domain-containing protein 7B yes no 3 0.0036495 46.971 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 7570400 0 2185800 1734400 1207700 0 2442500 2767 517 2800 12215;12216;12217;12218 8076 8076 1 GSLEEAEAER CVDEEHGKGSLEEAEA LEEAEAERLLLIATGK K G S E R L 2 1 0 0 0 0 4 1 0 0 1 0 0 0 0 1 0 0 0 0 0 10 0 1089.4938 Q9NQW6;Q9NQW6-2;H7C1K5 Q9NQW6 752 761 ANLN Actin-binding protein anillin yes no 2 0.011321 71.221 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 9388400 540900 1872600 543070 286260 1461600 4684000 2768 1533 2801 12219;12220;12221;12222;12223;12224 8077;8078 8077 2 GSLGGGFSSGGFSGGSFSR SLRISSSKGSLGGGFS FSGGSFSRGSSGGGCF K G S S R G 0 1 0 0 0 0 0 8 0 0 1 0 0 3 0 6 0 0 0 0 0 19 0 1706.7649 P13645;CON__P13645 P13645 41 59 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0 234.51 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 491580000 27038000 193790000 0 123580000 9614500 137560000 + 2769 298 2802 12225;12226;12227;12228;12229 8079;8080;8081;8082;8083 8079 5 GSLGQGTAPVLPGKTGPTVTQVK KAASVPVKGSLGQGTA GPTVTQVKAEKQEDSE K G S V K A 1 0 0 0 0 2 0 5 0 0 2 2 0 0 3 1 4 0 0 3 0 23 1 2192.2165 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 733 755 TCOF1 Treacle protein no no 3 0.016233 35.195 By matching By matching By matching By matching By matching By MS/MS 1 2079000 0 0 0 0 0 2079000 2770 1082;383 2803 12230 8084 8084 1 GSLPDTQPSQGPSTPK SFLPCLRRGSLPDTQP SQGPSTPKGERASSPC R G S P K G 0 0 0 1 0 2 0 2 0 0 1 1 0 0 4 3 2 0 0 0 0 16 0 1595.7791 H9KV46;Q86Y91;Q86Y91-2;Q86Y91-3;Q86Y91-4 H9KV46 664 679 KIF18B Kinesin-like protein KIF18B yes no 2 0.0052374 49.621 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 10129000 0 1389900 947190 563880 1872700 5355000 2771 675 2804 12231;12232;12233;12234;12235 8085;8086;8087 8086 3 GSNLDAPEPYRIGR RKYSDYIKGSNLDAPE PEPYRIGRIKEIFCPK K G S G R I 1 2 1 1 0 0 1 2 0 1 1 0 0 0 2 1 0 0 1 0 0 14 1 1543.7743 F5GX68 F5GX68 982 995 DNMT1 Cytosine-specific methyltransferase no no 3 0.0033796 59.796 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 20118000 1085400 2175100 0 0 3782100 13076000 2772 487 2805 12236;12237;12238;12239 8088;8089 8088 2 GSPDGSHPVVVAPYNGGPPRTCPK PSVISVSKGSPDGSHP GPPRTCPKIKQEAVSS K G S P K I 1 1 1 1 1 0 0 4 1 0 0 1 0 0 6 2 1 0 1 3 0 24 1 2445.1859 O43474-4;O43474-1;O43474 O43474-4 203 226 KLF4 Krueppel-like factor 4 yes no 4 0.0039802 46.558 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 19430000 0 2641700 2245900 2126800 5203200 7212200 2773 717 2806 12240;12241;12242;12243;12244 8090;8091 8090 2 GSPDGSLQTGKPSAPK ALKLRSPRGSPDGSLQ TGKPSAPKKLKLDVGE R G S P K K 1 0 0 1 0 1 0 3 0 0 1 2 0 0 3 3 1 0 0 0 0 16 1 1525.7736 E7EV54;Q8IZL8;I3L3A8;C9JFV4;Q8IZL8-2;F8WDZ1 E7EV54 333 348 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 3 0.004993 50.305 By matching By matching By matching By matching By MS/MS By matching 1 1 1 4722600 0 1394300 0 0 1485300 1843000 2774 242 2807 12245;12246;12247 8092 8092 1 GSPEEPVVGCPLGQRQPCRK TKLPQLSKGSPEEPVV GQRQPCRKMLPDRSRA K G S R K M 0 2 0 0 2 2 2 3 0 0 1 1 0 0 4 1 0 0 0 2 0 20 2 2250.0998 Q2TAK8;Q2TAK8-2 Q2TAK8 539 558 MUM1 PWWP domain-containing protein MUM1 yes no 4 0.012834 39.348 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 20167000 1689800 3408300 2883300 1576500 1885500 8723300 2775 1161 2808 12248;12249;12250;12251;12252;12253 8093;8094 8093 2 GSPHPGVGVPTYYNHPEALK LSLYSATKGSPHPGVG YNHPEALKREKAGGPQ K G S L K R 1 0 1 0 0 0 1 3 2 0 1 1 0 0 4 1 1 0 2 2 0 20 0 2119.0487 Q6PJG2;F6RU81 Q6PJG2 147 166 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 3;4 0.00011802 73.735 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 2 24299000 4786200 1077800 2522200 0 0 15912000 2776 1231 2809 12254;12255;12256;12257;12258;12259 8095;8096;8097;8098;8099;8100;8101 8099 6 GSPHPGVGVPTYYNHPEALKR LSLYSATKGSPHPGVG NHPEALKREKAGGPQL K G S K R E 1 1 1 0 0 0 1 3 2 0 1 1 0 0 4 1 1 0 2 2 0 21 1 2275.1498 Q6PJG2;F6RU81 Q6PJG2 147 167 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 4 0.039429 28.325 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4609200 642080 1180500 0 0 0 2786600 2777 1231 2810 12260;12261;12262 8102 8102 1 GSPRPQAPKANGTSALTAQNGK EEEKLKGKGSPRPQAP ALTAQNGKAAKNSEEE K G S G K A 4 1 2 0 0 2 0 3 0 0 1 2 0 0 3 2 2 0 0 0 0 22 2 2150.1192 Q14978;Q14978-3;Q14978-2 Q14978 537 558 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 3 0.030015 40.137 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 3653200 695180 924180 0 0 1183300 850510 2778 1120 2811 12263;12264;12265;12266 8103 8103 1 GSPTGGAQLLK GSHPQGPRGSPTGGAQ TGGAQLLKRKRKLGVV R G S L K R 1 0 0 0 0 1 0 3 0 0 2 1 0 0 1 1 1 0 0 0 0 11 0 1027.5662 Q14684-2;Q14684 Q14684-2 494 504 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 2 0.029525 64.64 By MS/MS By matching By matching By matching By matching By matching 1 2333900 2333900 0 0 0 0 0 2779 1111 2812 12267 8104 8104 0 GSPVNALQNK VGVPKGAKGSPVNALQ PVNALQNKRAPKQAES K G S N K R 1 0 2 0 0 1 0 1 0 0 1 1 0 0 1 1 0 0 0 1 0 10 0 1026.5458 Q8NI27 Q8NI27 406 415 THOC2 THO complex subunit 2 yes yes 2 0.0034562 89.029 By MS/MS By matching By MS/MS By MS/MS By matching By matching 2 1 1 1 1 1 16179000 2878500 1823000 2931800 1452700 2761500 4331700 2780 1330 2813 12268;12269;12270;12271;12272;12273;12274 8105;8106;8107;8108 8106 4 GSQITQQSTNQSRNPATTNQTEFERVF YLAPPRRKGSQITQQS QTEFERVF________ K G S V F - 1 2 3 0 0 5 2 1 0 1 0 0 0 2 1 3 5 0 0 1 0 27 2 3068.4548 P50750;P50750-2 P50750 346 372 CDK9 Cyclin-dependent kinase 9 yes no 3 0.0024453 44.474 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 13418000 0 6942200 6476300 0 0 0 2781 949 2814 12275;12276 8109;8110 8109 2 GSQTNLKDPVGVYCR PRKPTVKKGSQTNLKD DPVGVYCRVRPLGFPD K G S C R V 0 1 1 1 1 1 0 2 0 0 1 1 0 0 1 1 1 0 1 2 0 15 1 1692.8254 Q02241-2;H7BYN4;Q02241;H0YME6;H0YMJ4 Q02241-2 17 31 KIF23 Kinesin-like protein KIF23 yes no 3 0.0038229 55.975 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5467800 0 2219500 864400 0 0 2383900 2782 660 2815 12277;12278;12279 8111 8111 1 GSRGGSGGSYGGGGSGGGYGGGSGSR GSGGSYGRGSRGGSGG YGGGSGSRGGSGGSYG R G S S R G 0 2 0 0 0 0 0 16 0 0 0 0 0 0 0 6 0 0 2 0 0 26 1 2090.875 P35527;CON__P35527 P35527 488 513 KRT9 Keratin, type I cytoskeletal 9 yes no 3 0.0011934 50.593 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 3842700 146870 413100 1928600 287000 263910 803240 + 2783 899 2816 12280;12281;12282;12283;12284;12285 8112;8113;8114 8113 3 GSRVFCVEEEDSESSLQK KTNLEKEKGSRVFCVE DSESSLQKRRRKKKKK K G S Q K R 0 1 0 1 1 1 4 1 0 0 1 1 0 1 0 4 0 0 0 2 0 18 1 2084.9321 Q14684-2;Q14684 Q14684-2 363 380 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 3 1.1298E-110 141.22 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 260760000 76753000 35517000 45135000 37044000 16723000 49592000 2784 1111 2817 12286;12287;12288;12289;12290;12291 8115;8116;8117;8118;8119;8120;8121 8116 7 GSSQLRVNAAFAAR RTAMPEPRGSSQLRVN VNAAFAARYNRYRERE R G S A R Y 4 2 1 0 0 1 0 1 0 0 1 0 0 1 0 2 0 0 0 1 0 14 1 1446.7692 Q8N9T8;F5H196;H0YFD2;H0YG97;F8WFC1;H0YG91;H0YH26 Q8N9T8 12 25 KRI1 Protein KRI1 homolog yes no 3 0.0055782 55.899 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2800400 0 615900 0 0 808070 1376500 2785 1312 2818 12292;12293;12294 8122 8122 1 GSSWHETCFICHR GTRKMEYKGSSWHETC ETCFICHRCQQPIGTK K G S H R C 0 1 0 0 2 0 1 1 2 1 0 0 0 1 0 2 1 1 0 0 0 13 0 1675.6984 Q14192 Q14192 119 131 FHL2 Four and a half LIM domains protein 2 yes yes 3 0.00186 67.879 By matching By matching By matching By matching By MS/MS By MS/MS 2 1 4199300 0 0 0 0 1701200 2498000 2786 1101 2819 12295;12296;12297 8123;8124;8125 8125 3 GSVEAASNAHLLQSK PPPLKLLKGSVEAASN NAHLLQSKSGTQPHAA K G S S K S 3 0 1 0 0 1 1 1 1 0 2 1 0 0 0 3 0 0 0 1 0 15 0 1510.774 Q92766-3;Q92766;Q92766-2;C9JU34 Q92766-3 552 566 RREB1 Ras-responsive element-binding protein 1 yes no 2;3 0.00061075 73.802 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2 2 6248400 426160 0 534110 203510 2013400 3071200 2787 1357 2820 12298;12299;12300;12301;12302;12303;12304 8126;8127 8126 2 GSVSLTTGQPVDQPTTESCSTLK TKTSNMNKGSVSLTTG TESCSTLKVAADLQLS K G S L K V 0 0 0 1 1 2 1 2 0 0 2 1 0 0 2 4 5 0 0 2 0 23 0 2392.1428 Q9H582-2;Q9H582;F5H7T9 Q9H582-2 134 156 ZNF644 Zinc finger protein 644 yes no 2 0.0091329 39.188 By MS/MS By matching By matching By matching By matching By matching 1 2268700 2268700 0 0 0 0 0 2788 1492 2821 12305 8128 8128 1 GTAYTFFTPGNLKQAR RTARSTNKGTAYTFFT PGNLKQARELIKVLEE K G T A R E 2 1 1 0 0 1 0 2 0 0 1 1 0 2 1 0 3 0 1 0 0 16 1 1770.9053 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 437 452 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 2;3 0 186.29 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 1 510900000 0 130500000 202700000 107620000 65739000 4336400 2789 1361;629 2822 12306;12307;12308;12309;12310;12311;12312;12313 8129;8130;8131;8132;8133;8134;8135 8130 6 GTEASSGTEAATGLEGEEK LYQDEAPKGTEASSGT TGLEGEEKDGISDSDS K G T E K D 3 0 0 0 0 0 5 4 0 0 1 1 0 0 0 2 3 0 0 0 0 19 0 1822.8068 Q8IY81 Q8IY81 594 612 FTSJ3 pre-rRNA processing protein FTSJ3 yes yes 2 0.038738 33.707 By matching By MS/MS By matching By matching By matching By matching 1 566660 0 566660 0 0 0 0 2790 1289 2823 12314 8136 8136 1 GTEGMEPEEGVTVESQPQVK TKKRKRQKGTEGMEPE VESQPQVKVEPLEEAI K G T V K V 0 0 0 0 0 2 5 3 0 0 0 1 1 0 2 1 2 0 0 3 0 20 0 2129.9787 O15446;O15446-2 O15446 295 314 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes no 2 0.014293 39.364 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 10314000 0 1559200 2130300 1603700 392360 4628800 2791 706 2824 12315;12316;12317;12318;12319 8137;8138 8138 2 GTFHDDRDDGVDYWAK FAGVSRPRGTFHDDRD DGVDYWAKRGRGRGTF R G T A K R 1 1 0 5 0 0 0 2 1 0 0 1 0 1 0 0 1 1 1 1 0 16 1 1895.8075 Q9NYF8-3;E9PK91;H0YF63 Q9NYF8-3 795 810 BCLAF1 Bcl-2-associated transcription factor 1 yes no 3 0.0032951 66.215 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 7255600 1486400 850260 1548900 1482500 1887700 0 2792 452 2825 12320;12321;12322;12323;12324 8139;8140 8139 2 GTGASGSFKLNK KGTLVQTKGTGASGSF SGSFKLNKKAASGEAK K G T N K K 1 0 1 0 0 0 0 3 0 0 1 2 0 1 0 2 1 0 0 0 0 12 1 1165.6091 P16401;P16403;Q02539;P10412;P16402 P10412 98 109 HIST1H1B;HIST1H1C;HIST1H1A;HIST1H1E;HIST1H1D Histone H1.5;Histone H1.2;Histone H1.1;Histone H1.4;Histone H1.3 no no 2 1.2523E-289 190.66 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 38787000 10319000 4523000 7637300 2230100 10236000 3841500 2793 818;843;842 2826 12325;12326;12327;12328;12329;12330 8141;8142;8143;8144 8144 4 GTGIVSAPVPK VRLIPAPRGTGIVSAP IVSAPVPKKLLMMAGI R G T P K K 1 0 0 0 0 0 0 2 0 1 0 1 0 0 2 1 1 0 0 2 0 11 0 1024.5917 P15880;H0YEN5;E9PQD7;E9PMM9;I3L404;E9PM36 P15880 201 211 RPS2 40S ribosomal protein S2 yes no 2 0.0097086 65.241 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 50635000 684450 5988400 2427300 9227600 18143000 14164000 2794 839 2827 12331;12332;12333;12334;12335;12336 8145;8146;8147;8148;8149 8145 5 GTIQTGVDTSK TGAMNVAKGTIQTGVD QTGVDTSKTVLTGTKD K G T S K T 0 0 0 1 0 1 0 2 0 1 0 1 0 0 0 1 3 0 0 1 0 11 0 1105.5615 Q96Q06-2;Q96Q06 Q96Q06-2 270 280 PLIN4 Perilipin-4 yes no 2 0.01798 57.164 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2135500 550620 1023800 561160 0 0 0 2795 1413 2828 12337;12338;12339 8150;8151 8151 2 GTISAPGKVVTAAAQAK AARAPSAKGTISAPGK VTAAAQAKQRSPSKVK K G T A K Q 5 0 0 0 0 1 0 2 0 1 0 2 0 0 1 1 2 0 0 2 0 17 1 1568.8886 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 804 820 TCOF1 Treacle protein no no 2;3 0.00029306 83.751 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 2 1 2 2 1 27693000 7524800 3281600 2265000 3797000 8849600 1974600 2796 1082;383 2829 12340;12341;12342;12343;12344;12345;12346;12347;12348 8152;8153;8154;8155 8155 4 GTKTPINRNQLSQNR PLKPKTPRGTKTPINR RNQLSQNRGLGGIMVK R G T N R G 0 2 3 0 0 2 0 1 0 1 1 1 0 0 1 1 2 0 0 0 0 15 2 1725.9234 O94776;Q68DB1 O94776 537 551 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 4 0.011666 45.722 By matching By matching By matching By matching By matching By MS/MS 1 1 2316900 0 0 442540 0 0 1874400 2797 754 2830 12349;12350 8156 8156 1 GTLVQTKGTGASGSFK GLKSLVSKGTLVQTKG TGASGSFKLNKKAASG K G T F K L 1 0 0 0 0 1 0 4 0 0 1 2 0 1 0 2 3 0 0 1 0 16 1 1537.81 P16401;P16403;Q02539;P10412;P16402 P10412 91 106 HIST1H1B;HIST1H1C;HIST1H1A;HIST1H1E;HIST1H1D Histone H1.5;Histone H1.2;Histone H1.1;Histone H1.4;Histone H1.3 no no 2;3 2.2057E-50 120.32 By MS/MS By MS/MS By matching By MS/MS By matching By matching 4 2 2 2 1 2 55535000 28673000 5910800 4528500 4207500 8565400 3650400 2798 818;843;842 2831 12351;12352;12353;12354;12355;12356;12357;12358;12359;12360;12361;12362;12363 8157;8158;8159;8160;8161;8162;8163 8163 6 GTLVQTKGTGASGSFKLNK GLKSLVSKGTLVQTKG SGSFKLNKKAASGEAK K G T N K K 1 0 1 0 0 1 0 4 0 0 2 3 0 1 0 2 3 0 0 1 0 19 2 1893.032 P16401;P16403;Q02539;P10412;P16402 P10412 91 109 HIST1H1B;HIST1H1C;HIST1H1A;HIST1H1E;HIST1H1D Histone H1.5;Histone H1.2;Histone H1.1;Histone H1.4;Histone H1.3 no no 3;4 4.8058E-27 106.87 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 2 2 2 2 183930000 100260000 11928000 21923000 23404000 19079000 7327000 2799 818;843;842 2832 12364;12365;12366;12367;12368;12369;12370;12371;12372;12373;12374;12375 8164;8165;8166;8167;8168;8169;8170;8171;8172;8173 8173 10 GTNIQENEYVK QACQLRVKGTNIQENE IQENEYVKMGAYHTIE K G T V K M 0 0 2 0 0 1 2 1 0 1 0 1 0 0 0 0 1 0 1 1 0 11 0 1293.6201 Q9BRX2 Q9BRX2 85 95 PELO Protein pelota homolog yes yes 2 0.0097086 75.788 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 13787000 0 1731300 1324400 1239300 4723900 4767700 2800 1443 2833 12376;12377;12378;12379;12380 8174;8175;8176;8177 8174 3 GTPAGTTPGASQAPK APHSSPARGTPAGTTP PGASQAPKAFNKPHLA R G T P K A 3 0 0 0 0 1 0 3 0 0 0 1 0 0 3 1 3 0 0 0 0 15 0 1339.6732 Q8IVT2 Q8IVT2 218 232 MISP Mitotic interactor and substrate of PLK1 yes yes 2 0.0050947 52.966 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3512000 385140 360450 529280 0 0 2237100 2801 1278 2834 12381;12382;12383;12384 8178 8178 1 GTPGKGATPAPPGK RAASAPAKGTPGKGAT ATPAPPGKAGAVASQT K G T G K A 2 0 0 0 0 0 0 4 0 0 0 2 0 0 4 0 2 0 0 0 0 14 1 1234.667 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 309 322 TCOF1 Treacle protein no no 3 0.0011282 80.96 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 11996000 1896200 1757700 1299600 927610 3227800 2887100 2802 1082;383 2835 12385;12386;12387;12388;12389;12390 8179;8180;8181;8182;8183;8184 8183 6 GTQLLSSGSDGLVK LKVAFVSRGTQLLSSG SGSDGLVKLWTIKNNE R G T V K L 0 0 0 1 0 1 0 3 0 0 3 1 0 0 0 3 1 0 0 1 0 14 0 1360.7198 Q12788 Q12788 575 588 TBL3 Transducin beta-like protein 3 yes yes 2 0.0080932 52.527 By matching By matching By matching By matching By matching By MS/MS 1 1 4373000 0 525780 0 0 0 3847200 2803 1058 2836 12391;12392 8185 8185 1 GTQNIPAGKPSLQTSSAR TTPPPLVRGTQNIPAG SLQTSSARMPGSVIPP R G T A R M 2 1 1 0 0 2 0 2 0 1 1 1 0 0 2 3 2 0 0 0 0 18 1 1811.949 Q86YP4;B5MC40;Q86YP4-2 Q86YP4 196 213 GATAD2A Transcriptional repressor p66-alpha yes no 3 0.0018493 54.953 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 16437000 0 4296000 4830000 0 0 7310800 2804 170 2837 12393;12394;12395 8186;8187;8188 8186 3 GTQTYSVLEGDPSENYSK EICRIITKGTQTYSVL DPSENYSKYLLSLKEK K G T S K Y 0 0 1 1 0 1 2 2 0 0 1 1 0 0 1 3 2 0 2 1 0 18 0 1973.8854 P52701;B4DF41;F5H2F9;F5H769;P52701-2 P52701 520 537 MSH6 DNA mismatch repair protein Msh6 yes no 2 1.0674E-33 112.91 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 14952000 2903500 0 5896700 0 6151500 0 2805 959 2838 12396;12397;12398 8189;8190;8191 8190 3 GTSISTKPPLTK ________________ STKPPLTKDRGVAASA K G T T K D 0 0 0 0 0 0 0 1 0 1 1 2 0 0 2 2 3 0 0 0 0 12 1 1228.7027 P35249;C9JZI1;C9JGY5;F8WE44;C9JXZ7;C9JTT7;C9J8M3;C9JW34 P35249 7 18 RFC4 Replication factor C subunit 4 yes no 2;3 0.0049515 85.973 By matching By matching By MS/MS By matching By matching By MS/MS 1 2 2 2 1 9248000 671470 0 1543700 1133300 3480600 2419000 2806 894 2839 12399;12400;12401;12402;12403;12404;12405;12406 8192;8193;8194 8194 3 GTTATSAQANSTPTSVASVVTSAESPASRQAAAK QPTPASLKGTTATSAQ ASRQAAAKLALRKQLE K G T A K L 9 1 1 0 0 2 1 1 0 0 0 1 0 0 2 7 6 0 0 3 0 34 1 3204.5858 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7 Q86YP4 316 349 GATAD2A Transcriptional repressor p66-alpha yes no 3 9.1533E-24 59.565 By matching By MS/MS By matching By matching By matching By matching 1 31808000 0 31808000 0 0 0 0 2807 170 2840 12407 8195 8195 1 GTTEPHSRGHLSRPEAQSLSPYTTSANR TQLEGATRGTTEPHSR PYTTSANRAKLLAKNR R G T N R A 2 3 1 0 0 1 2 2 2 0 2 0 0 0 3 5 4 0 1 0 0 28 2 3036.4762 O94776;Q68DB1 O94776 416 443 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 5 0.001788 48.51 By matching By matching By matching By matching By matching By MS/MS 1 7877400 0 0 0 0 0 7877400 2808 754 2841 12408 8196 8196 1 GTVQTGVDTAK TGAVNVAKGTVQTGVD QTGVDTAKTVLSGAKD K G T A K T 1 0 0 1 0 1 0 2 0 0 0 1 0 0 0 0 3 0 0 2 0 11 0 1075.551 Q96Q06-2;Q96Q06 Q96Q06-2 996 1006 PLIN4 Perilipin-4 yes no 2 0.029071 51.727 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1101400 0 728140 0 110920 0 262310 2809 1413 2842 12409;12410;12411 8197 8197 1 GVAFIRFDK DQTTGLSRGVAFIRFD VAFIRFDKRSEAEEAI R G V D K R 1 1 0 1 0 0 0 1 0 1 0 1 0 2 0 0 0 0 0 1 0 9 1 1051.5815 Q15717 Q15717 148 156 ELAVL1 ELAV-like protein 1 yes yes 2 3.9514E-86 157.34 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 92049000 0 11739000 23378000 0 10245000 46688000 2810 1146 2843 12412;12413;12414;12415 8198;8199;8200;8201 8198 4 GVAVKVEEPR PTWKEMAKGVAVKVEE AVKVEEPRYKKDKQLN K G V P R Y 1 1 0 0 0 0 2 1 0 0 0 1 0 0 1 0 0 0 0 3 0 10 1 1082.6084 Q9BQ69 Q9BQ69 134 143 MACROD1 O-acetyl-ADP-ribose deacetylase MACROD1 yes yes 2 0.015668 86.014 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 2469700 454900 578070 172270 131100 0 1133300 2811 1439 2844 12416;12417;12418;12419;12420 8202;8203 8202 2 GVAVKVEEPRYK PTWKEMAKGVAVKVEE KVEEPRYKKDKQLNEK K G V Y K K 1 1 0 0 0 0 2 1 0 0 0 2 0 0 1 0 0 0 1 3 0 12 2 1373.7667 Q9BQ69 Q9BQ69 134 145 MACROD1 O-acetyl-ADP-ribose deacetylase MACROD1 yes yes 3 0.01156 68.355 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 9414500 2344200 2461200 4609100 0 0 0 2812 1439 2845 12421;12422;12423 8204;8205 8205 2 GVDGSFLARPSK AENLLLTRGVDGSFLA SFLARPSKSNPGDFTL R G V S K S 1 1 0 1 0 0 0 2 0 0 1 1 0 1 1 2 0 0 0 1 0 12 1 1232.6513 Q06124;Q06124-2;Q06124-3 Q06124 24 35 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes no 2;3 0.0018641 83.137 By matching By matching By matching By matching By MS/MS By MS/MS 1 2 2 4116100 292210 0 0 0 1380300 2443600 2813 1040 2846 12424;12425;12426;12427;12428 8206;8207;8208 8208 3 GVEICIATPGR PQIRDLERGVEICIAT ICIATPGRLIDFLESG R G V G R L 1 1 0 0 1 0 1 2 0 2 0 0 0 0 1 0 1 0 0 1 0 11 0 1171.6019 P17844;E7ETL9;Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 215 225 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 2 0.0023914 87.667 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 7727100 0 1550100 0 0 0 6177000 2814 1361;629;853 2847 12429;12430 8209;8210;8211 8210 3 GVEKQQLPEQPFEK HQPLGRAKGVEKQQLP LPEQPFEKAAFQKQND K G V E K A 0 0 0 0 0 3 3 1 0 0 1 2 0 1 2 0 0 0 0 1 0 14 1 1655.8519 P46087;Q3KQS4;P46087-2 P46087 754 767 NOP2 Putative ribosomal RNA methyltransferase NOP2 yes no 3 0.00415 58.268 By matching By matching By matching By matching By MS/MS By matching 1 1 1 8312500 0 0 0 1246000 5283900 1782600 2815 923 2848 12431;12432;12433 8212 8212 1 GVGGNNGGNGNGGGAFSQAR TAVVKIEKGVGGNNGG GGAFSQARSSSTGSSS K G V A R S 2 1 4 0 0 1 0 9 0 0 0 0 0 1 0 1 0 0 0 1 0 20 0 1746.7782 P08047;G5E9M8;H3BUU5;H3BVI2 P08047 20 39 SP1 Transcription factor Sp1 yes no 2 0.00016211 78.674 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 19381000 1144100 3575600 3367100 930670 2756100 7607000 2816 804 2849 12434;12435;12436;12437;12438;12439 8213;8214;8215;8216;8217 8215 5 GVLHTFSPSPK RGSATTPRGVLHTFSP HTFSPSPKLQNSASAT R G V P K L 0 0 0 0 0 0 0 1 1 0 1 1 0 1 2 2 1 0 0 1 0 11 0 1168.6241 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7;F5H7D9;H7C3H1 Q86YP4 540 550 GATAD2A Transcriptional repressor p66-alpha yes no 2 0.0050529 73.951 By matching By matching By matching By matching By matching By MS/MS 1 1 6084300 0 0 648960 0 0 5435400 2817 170 2850 12440;12441 8218 8218 1 GVLLTDGSEKDK LYRHMQAKGVLLTDGS TDGSEKDKKGKGGTKT K G V D K K 0 0 0 2 0 0 1 2 0 0 2 2 0 0 0 1 1 0 0 1 0 12 1 1260.6561 P51532-5;P51532-2;P51532-3;P51532-4;P51532;Q9HBD4;F5H0X5 P51532-5 1015 1026 SMARCA4 Transcription activator BRG1 yes no 2;3 8.9909E-07 102.4 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2 8845400 367020 669620 876380 0 920660 6011800 2818 952 2851 12442;12443;12444;12445;12446;12447 8219;8220;8221;8222;8223 8219 5 GVLNVHPAASASKPSADQIR MKKKKVEKGVLNVHPA KPSADQIRQSVRHSLK K G V I R Q 4 1 1 1 0 1 0 1 1 1 1 1 0 0 2 3 0 0 0 2 0 20 1 2017.0705 Q92576-2;Q92576;E7EVH3;E7ER40 Q92576-2 821 840 PHF3 PHD finger protein 3 yes no 4 0.016693 38.665 By matching By matching By matching By matching By matching By MS/MS 1 1 3814800 0 0 743360 0 0 3071400 2819 1353 2852 12448;12449 8224 8224 1 GVPATNPAPGKGTGSGLIGASGATMPTDTSK ARHATATKGVPATNPA TMPTDTSKSEKLASRA K G V S K S 4 0 1 1 0 0 0 7 0 1 1 2 1 0 4 3 5 0 0 1 0 31 1 2797.3916 Q14781 Q14781 380 410 CBX2 Chromobox protein homolog 2 yes yes 3 5.901E-05 38.553 By matching By matching By matching By matching By matching By MS/MS 1 2718600 0 0 0 0 0 2718600 2820 1114 2853 12450 8225 8225 1 GVPQQIEVAR NLRRFTIRGVPQQIEV PQQIEVARQLIDEKVG R G V A R Q 1 1 0 0 0 2 1 1 0 1 0 0 0 0 1 0 0 0 0 2 0 10 0 1095.6037 Q96I24 Q96I24 409 418 FUBP3 Far upstream element-binding protein 3 yes yes 2 0.0028455 95.775 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 23257000 1954500 2654100 2223500 0 3888200 12537000 2821 1394 2854 12451;12452;12453;12454;12455 8226;8227;8228;8229 8227 4 GVQDSGGSEVAWGPQK TVQPPCSRGVQDSGGS EVAWGPQKGQAGLTWK R G V Q K G 1 0 0 1 0 2 1 4 0 0 0 1 0 0 1 2 0 1 0 2 0 16 0 1600.7481 E7EMV9;E5RI52;E5RJC6;B7Z1T6;Q6NTE8-2;E9PAK6;Q6NTE8 E7EMV9 109 124 C5orf45 UPF0544 protein C5orf45 yes no 2 3.7995E-07 92.952 By matching By matching By matching By matching By matching By MS/MS 1 835360 0 0 0 0 0 835360 2822 182 2855 12456 8230 8230 1 GVQGFQDYIEK ________________ GFQDYIEKHCPSAVVP M G V E K H 0 0 0 1 0 2 1 2 0 1 0 1 0 1 0 0 0 0 1 1 0 11 0 1282.6194 Q9NZB2;Q9NZB2-6;Q9NZB2-4;Q9NZB2-2;Q9NZB2-5 Q9NZB2 2 12 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 2 0.0036025 81.625 By matching By MS/MS By matching By matching By matching By matching 1 1 4461200 0 2601900 0 1859300 0 0 2823 1566 2856 12457;12458 8231 8231 1 GVTAKGPVNSCQGK KGPNCVIRGVTAKGPV PVNSCQGKNYNLKVTL R G V G K N 1 0 1 0 1 1 0 3 0 0 0 2 0 0 1 1 1 0 0 2 0 14 1 1401.7034 A6NHR9;A6NHR9-2 A6NHR9 887 900 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes no 3 0.029471 41.577 By matching By MS/MS By matching By matching By matching By matching 1 239140 0 239140 0 0 0 0 2824 23 2857 12459 8232 8232 1 GVTCLSFSK RFERAHSKGVTCLSFS VTCLSFSKDSSQILSA K G V S K D 0 0 0 0 1 0 0 1 0 0 1 1 0 1 0 2 1 0 0 1 0 9 0 997.49027 B4E3L0;Q2TAY7 B4E3L0 148 156 SMU1 WD40 repeat-containing protein SMU1 yes no 2 0.0087494 86.882 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4076300 0 0 706200 0 1101100 2269000 2825 167 2858 12460;12461;12462 8233 8233 1 GVVEVTHDLQK AVAISLPKGVVEVTHD EVTHDLQKHLAGLGLT K G V Q K H 0 0 0 1 0 1 1 1 1 0 1 1 0 0 0 0 1 0 0 3 0 11 0 1223.651 E9PKH2;B4DN87;P50454 E9PKH2 92 102 SERPINH1 Serpin H1 yes no 2 0.0068157 81.525 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 2826 108 2859 12463 8234 8234 1 GWGEEQNHGVK QMDTLKTKGWGEEQNH EEQNHGVKTTQFVPKQ K G W V K T 0 0 1 0 0 1 2 3 1 0 0 1 0 0 0 0 0 1 0 1 0 11 0 1239.5632 B4DQ42;Q9HC62;E7ENF4 B4DQ42 244 254 SENP2 Sentrin-specific protease 2 yes no 2;3 0.004109 74.533 By matching By matching By MS/MS By matching By matching By MS/MS 2 2 1 2 2 6451000 0 1185200 1529600 495780 182460 3058000 2827 115 2860 12464;12465;12466;12467;12468;12469;12470;12471;12472 8235;8236;8237 8237 3 GYAVEVLLEQNRSR QKYLQSEKGYAVEVLL LLEQNRSRLTKFHNLK K G Y S R L 1 2 1 0 0 1 2 1 0 0 2 0 0 0 0 1 0 0 1 2 0 14 1 1632.8584 F2Z2E1;Q96EK7;F5GZX9;F5GY05;B4DL34 F2Z2E1 820 833 FAM120B Constitutive coactivator of peroxisome proliferator-activated receptor gamma yes no 3 0.004242 58.116 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3094700 0 0 507990 0 789370 1797400 2828 474 2861 12473;12474;12475 8238 8238 1 GYAYVEFENPDEAEK RMHPHLSKGYAYVEFE ENPDEAEKALKHMDGG K G Y E K A 2 0 1 1 0 0 4 1 0 0 0 1 0 1 1 0 0 0 2 1 0 15 0 1759.7577 H3BV80;H3BMM9;H3BTC0;Q15287;H3BR57;H3BPG5;H3BMS0;Q15287-3;Q15287-2 H3BV80 110 124 RNPS1 RNA-binding protein with serine-rich domain 1 yes no 2 1.8246E-199 168.93 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 112280000 34945000 36721000 0 9229400 9071000 22312000 2829 631 2862 12476;12477;12478;12479;12480;12481 8239;8240;8241;8242;8243;8244;8245 8241 7 GYEEEIIHFK NLALGRQKGYEEEIIH EEEIIHFKKELREPQF K G Y F K K 0 0 0 0 0 0 3 1 1 2 0 1 0 1 0 0 0 0 1 0 0 10 0 1263.6136 Q92878-2;Q92878;Q92878-3 Q92878-2 1086 1095 RAD50 DNA repair protein RAD50 yes no 3 0.027422 72.607 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 0 0 0 0 0 0 0 2830 1362 2863 12482;12483 8246;8247 8246 2 GYGPATQVR RIAARNEKGYGPATQV YGPATQVRWLQETSKD K G Y V R W 1 1 0 0 0 1 0 2 0 0 0 0 0 0 1 0 1 0 1 1 0 9 0 947.48248 A6NEM2;P51610-2;P51610;H7C1C4;Q9Y5Z7 A6NEM2 2035 2043 HCFC1;HCFC2 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6;Host cell factor 2 yes no 2 0.038976 68.371 By matching By matching By matching By matching By matching By MS/MS 1 1 6526400 0 0 0 0 1856800 4669700 2831 18 2864 12484;12485 8248 8248 1 GYGYGQGAGTLNMDR YGKKYGPKGYGYGQGA AGTLNMDRGERLGIKP K G Y D R G 1 1 1 1 0 1 0 5 0 0 1 0 1 0 0 0 1 0 2 0 0 15 0 1558.6834 Q16527;F8VW96;F8VQR7 Q16527 70 84 CSRP2 Cysteine and glycine-rich protein 2 yes no 2 0.00060771 73.758 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 2 15221000 820570 2130900 1452100 0 1771400 9046300 2832 1152 2865 12486;12487;12488;12489;12490;12491 8249;8250;8251;8252;8253 8251 5 GYGYGQGAGTLNMDRGER YGKKYGPKGYGYGQGA LNMDRGERLGIKPESV K G Y E R L 1 2 1 1 0 1 1 6 0 0 1 0 1 0 0 0 1 0 2 0 0 18 1 1900.8486 Q16527;F8VW96;F8VQR7 Q16527 70 87 CSRP2 Cysteine and glycine-rich protein 2 yes no 3 0.0015797 60.549 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 2 1 99666000 6191600 16686000 13053000 4142100 9421300 50173000 2833 1152 2866 12492;12493;12494;12495;12496;12497;12498 8254;8255;8256;8257;8258;8259;8260 8256 7 GYGYGQGAGTLSTDK YGKKYGPKGYGYGQGA AGTLSTDKGESLGIKH K G Y D K G 1 0 0 1 0 1 0 5 0 0 1 1 0 0 0 1 2 0 2 0 0 15 0 1473.6736 P21291;E9PND2;E9PS42;E9PP21 P21291 70 84 CSRP1 Cysteine and glycine-rich protein 1 yes no 2 0.00069414 75.02 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 9133300 573670 1434300 761880 652100 3841600 1869700 2834 859 2867 12499;12500;12501;12502;12503;12504 8261;8262;8263;8264;8265 8263 4 GYGYGQGAGTLSTDKGESLGIK YGKKYGPKGYGYGQGA KGESLGIKHEEAPGHR K G Y I K H 1 0 0 1 0 1 1 7 0 1 2 2 0 0 0 2 2 0 2 0 0 22 1 2158.0542 P21291;E9PND2;E9PS42;E9PP21 P21291 70 91 CSRP1 Cysteine and glycine-rich protein 1 yes no 3 5.3197E-06 63.225 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 17239000 8686500 948530 0 1252500 3044600 3306500 2835 859 2868 12505;12506;12507;12508;12509 8266;8267;8268;8269 8267 4 GYHTLSQGSLPNYPK LEKDLHLKGYHTLSQG GSLPNYPKSVKCYLSR K G Y P K S 0 0 1 0 0 1 0 2 1 0 2 1 0 0 2 2 1 0 2 0 0 15 0 1660.8209 Q9H649 Q9H649 73 87 NSUN3 Putative methyltransferase NSUN3 yes yes 3 0.0021215 61.657 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 8916500 779720 2129400 1579200 0 973020 3455200 2836 1495 2869 12510;12511;12512;12513;12514 8270 8270 1 GYNATVLAYGQTGSGK PLIKGVFKGYNATVLA YGQTGSGKTYSMGGAY K G Y G K T 2 0 1 0 0 1 0 4 0 0 1 1 0 0 0 1 2 0 2 1 0 16 0 1585.7736 O95239;O95239-2;Q2VIQ3 O95239 79 94 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 2 0.0039681 52.172 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 7999800 649190 1840700 1074400 0 0 4435500 2837 768 2870 12515;12516;12517;12518 8271;8272;8273;8274 8272 3 GYPHLCSICDLPVHSNK DFHGLLPKGYPHLCSI DLPVHSNKEWSQHING K G Y N K E 0 0 1 1 2 0 0 1 2 1 2 1 0 0 2 2 0 0 1 1 0 17 0 1995.9295 P43243;A8MXP9;D6REM6;D6R991;H0Y8T4 P43243 288 304 MATR3 Matrin-3 yes no 3;4 3.9757E-271 174.24 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 1 1 1 2 101940000 7934700 38205000 9534900 16436000 1828800 28006000 2838 52 2871 12519;12520;12521;12522;12523;12524;12525;12526 8275;8276;8277;8278;8279;8280;8281 8279 7 GYPHWPARIDEMPEAAVK DLVFAKMKGYPHWPAR EMPEAAVKSTANKYQV K G Y V K S 3 1 0 1 0 0 2 1 1 1 0 1 1 0 3 0 0 1 1 1 0 18 1 2066.0044 P51858;B7Z525 P51858 22 39 HDGF Hepatoma-derived growth factor yes no 3;4 0.035508 43.05 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 24114000 4404400 0 0 19710000 0 0 2839 954 2872 12527;12528 8282;8283 8283 1 GYSPTHREEEYGK SSEKKERKGYSPTHRE HREEEYGKNHHNSSKK K G Y G K N 0 1 0 0 0 0 3 2 1 0 0 1 0 0 1 1 1 0 2 0 0 13 1 1551.6954 P20930;CON__P20930 P20930 163 175 FLG Filaggrin yes no 3 0.0017063 80.871 By matching By matching By matching By matching By matching By MS/MS 1 1 9360900 0 0 0 2859600 0 6501300 + 2840 301 2873 12529;12530 8284 8284 1 GYTIPLDK ISNWKNAKGYTIPLDK GYTIPLDKRLAADGRG K G Y D K R 0 0 0 1 0 0 0 1 0 1 1 1 0 0 1 0 1 0 1 0 0 8 0 905.48583 Q13573;G3V3A4;G3V4X8;E9PGQ7;G3V5R3 Q13573 259 266 SNW1 SNW domain-containing protein 1 yes no 2 9.186E-05 113.41 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 30266000 1668400 6069600 4382500 3077000 4439100 10630000 2841 583 2874 12531;12532;12533;12534;12535;12536 8285;8286;8287;8288;8289 8289 5 GYYSPGIVSTR HTNYLLMRGYYSPGIV SPGIVSTRNLNPNDSI R G Y T R N 0 1 0 0 0 0 0 2 0 1 0 0 0 0 1 2 1 0 2 1 0 11 0 1198.5982 Q12789-3;Q12789;H7BYG6 Q12789-3 1650 1660 GTF3C1 General transcription factor 3C polypeptide 1 yes no 2 0.0006488 94.82 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 7828000 0 0 1081200 417310 813830 5515700 2842 1059 2875 12537;12538;12539;12540 8290 8290 1 HAAADEALKILQK YGTKKTSKHAAADEAL EALKILQKTQPTYPSV K H A Q K T 4 0 0 1 0 1 1 0 1 1 2 2 0 0 0 0 0 0 0 0 0 13 1 1406.7882 O15226;G3V1N1 O15226 399 411 NKRF NF-kappa-B-repressing factor yes no 3 1.1317E-59 131.17 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 49553000 9887100 4892000 12419000 7685700 979900 13689000 2843 578 2876 12541;12542;12543;12544;12545;12546;12547 8291;8292;8293;8294 8292 3 HAAENPGKYNILGTNTIMDK GKTTWVTKHAAENPGK GTNTIMDKMMVAGFKK K H A D K M 2 0 3 1 0 0 1 2 1 2 1 2 1 0 1 0 2 0 1 0 0 20 1 2186.079 Q00839;B3KX72;Q00839-2 Q00839 517 536 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 3;4 0 190.37 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 1 545590000 115920000 174060000 128520000 49640000 14575000 62872000 2844 1022;1023 2877;2878 12548;12549;12550;12551;12552;12553;12554;12555;12556;12557;12558;12559 8295;8296;8297;8298;8299;8300;8301;8302;8303;8304;8305 8298 122 11 HAAFVTPDQK DKTPLHQKHAAFVTPD AFVTPDQKYSMDNTPH K H A Q K Y 2 0 0 1 0 1 0 0 1 0 0 1 0 1 1 0 1 0 0 1 0 10 0 1112.5615 F8W6N6;P10244 F8W6N6 476 485 MYBL2 Myb-related protein B yes no 2 0.0070719 84.817 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 3553100 828040 794370 0 455760 672840 802060 2845 554 2879 12560;12561;12562;12563;12564 8306;8307;8308;8309;8310 8307 5 HAALSLSKEHNPTQYEER RYNEESQKHAALSLSK NPTQYEERMRIQKAGG K H A E R M 2 1 1 0 0 1 3 0 2 0 2 1 0 0 1 2 1 0 1 0 0 18 1 2109.0239 Q9H0C8;H7C2I8 Q9H0C8 251 268 ILKAP Integrin-linked kinase-associated serine/threonine phosphatase 2C yes no 4 0.0006069 72.797 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 4682900 1600500 1232300 0 0 1850200 0 2846 1478 2880 12565;12566;12567 8311;8312 8311 2 HAASTVQILGAEK GSLLNLAKHAASTVQI VQILGAEKALFRALKS K H A E K A 3 0 0 0 0 1 1 1 1 1 1 1 0 0 0 1 1 0 0 1 0 13 0 1323.7147 Q9Y2X3 Q9Y2X3 311 323 NOP58 Nucleolar protein 58 yes yes 2;3 1.5633E-34 120.6 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 2 2 75994000 15661000 5085400 8575600 11182000 20938000 14552000 2847 1640 2881 12568;12569;12570;12571;12572;12573;12574;12575;12576;12577;12578;12579;12580;12581 8313;8314;8315;8316;8317;8318;8319;8320;8321;8322;8323;8324;8325;8326;8327;8328;8329 8322 17 HADNCAGPDGVEGENGGETK TRRNTMARHADNCAGP GENGGETKKSKRGRKR R H A T K K 2 0 2 2 1 0 3 5 1 0 0 1 0 0 1 0 1 0 0 1 0 20 0 2012.813 P49711;B5MC38 P49711 573 592 CTCF Transcriptional repressor CTCF yes no 3 8.4938E-05 70.538 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1 1 5821500 961430 766710 228260 735760 1187400 1941900 2848 940 2882 12582;12583;12584;12585;12586;12587;12588 8330;8331;8332;8333;8334;8335;8336;8337 8333 8 HAIPIIKEK TRPTPVQKHAIPIIKE AIPIIKEKRDLMACAQ K H A E K R 1 0 0 0 0 0 1 0 1 3 0 2 0 0 1 0 0 0 0 0 0 9 1 1047.6441 O00571;O00571-2;B4DLU5;B4E3C4 O00571 209 217 DDX3X ATP-dependent RNA helicase DDX3X yes no 2 4.8407E-54 143.37 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 11347000 1720800 3115100 0 0 6511200 0 2849 693 2883 12589;12590;12591 8338;8339 8338 2 HAIPIIKEKR TRPTPVQKHAIPIIKE IPIIKEKRDLMACAQT K H A K R D 1 1 0 0 0 0 1 0 1 3 0 2 0 0 1 0 0 0 0 0 0 10 2 1203.7452 O00571;O00571-2;B4DLU5;B4E3C4 O00571 209 218 DDX3X ATP-dependent RNA helicase DDX3X yes no 3 0.015831 87.149 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 7606500 0 1373000 1617900 1066600 1242000 2307000 2850 693 2884 12592;12593;12594;12595;12596 8340;8341 8341 2 HALFPELPK ALFPEPRKHALFPELP ALFPELPKSALFSESQ K H A P K S 1 0 0 0 0 0 1 0 1 0 2 1 0 1 2 0 0 0 0 0 0 9 0 1050.5862 Q96JM3 Q96JM3 557 565 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0059488 104.2 By matching By MS/MS By matching By matching By matching By matching 1 4023300 0 4023300 0 0 0 0 2851 1399 2885 12597 8342 8342 1 HALKNGDICETSGKPK DKAVASFKHALKNGDI CETSGKPKTTPKRKPA K H A P K T 1 0 1 1 1 0 1 2 1 1 1 3 0 0 1 1 1 0 0 0 0 16 2 1753.8781 B4DP61;Q16637-4;Q16637-2;Q16637-3;Q16637;E7EQZ4 B4DP61 52 67 SMN1 Survival motor neuron protein yes no 4 0.0015634 68.751 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 9521000 1440700 1131000 2374400 2074600 1295000 1205300 2852 113 2886 12598;12599;12600;12601;12602;12603 8343;8344;8345;8346;8347 8344 5 HAPINSAQHLDNVDQTGPK KRKRKCQKHAPINSAQ NVDQTGPKAWKGSTTN K H A P K A 2 0 2 2 0 2 0 1 2 1 1 1 0 0 2 1 1 0 0 1 0 19 0 2040.9977 E9PPY3;O43159 E9PPY3 139 157 RRP8 Ribosomal RNA-processing protein 8 yes no 3;4 1.0453E-81 127.49 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 181370000 13680000 47390000 39332000 16003000 16019000 48943000 2853 462 2887 12604;12605;12606;12607;12608;12609;12610;12611;12612;12613;12614;12615 8348;8349;8350;8351;8352;8353;8354;8355;8356;8357;8358;8359 8353 12 HAQVHAGGPAPHPCPR KRLADLARHAQVHAGG PAPHPCPRCPRRFSRA R H A P R C 3 1 0 0 1 1 0 2 3 0 0 0 0 0 4 0 0 0 0 1 0 16 0 1687.8114 Q8NAF0 Q8NAF0 430 445 ZNF579 Zinc finger protein 579 yes yes 4 0.0018634 57.414 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 5843800 0 685760 591000 746980 1248300 2571700 2854 1313 2888 12616;12617;12618;12619;12620 8360;8361;8362 8360 3 HATIYPTEEELQAVQK DDRYVMTKHATIYPTE EELQAVQKIVSITERA K H A Q K I 2 0 0 0 0 2 3 0 1 1 1 1 0 0 1 0 2 0 1 1 0 16 0 1855.9316 Q96KR1;B5MEH6;H0Y8W1 Q96KR1 731 746 ZFR Zinc finger RNA-binding protein yes no 2;3 0 236.05 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 1 2 289010000 88616000 22661000 61477000 9910700 52402000 53942000 2855 1403 2889 12621;12622;12623;12624;12625;12626;12627;12628;12629;12630 8363;8364;8365;8366;8367;8368;8369;8370;8371;8372;8373 8364 10 HATLSVCYK TLIALADKHATLSVCY ATLSVCYKAGPGADNG K H A Y K A 1 0 0 0 1 0 0 0 1 0 1 1 0 0 0 1 1 0 1 1 0 9 0 1077.5277 Q13330;E7ESY4;Q13330-2 Q13330 62 70 MTA1 Metastasis-associated protein MTA1 yes no 2 0.018956 70.399 By matching By matching By matching By matching By matching By MS/MS 1 1803300 0 0 0 0 0 1803300 2856 1078 2890 12631 8374 8374 1 HAVNGFLKENKDNDK DETIFKFKHAVNGFLK KENKDNDKLIGVHCTH K H A D K L 1 0 3 2 0 0 1 1 1 0 1 3 0 1 0 0 0 0 0 1 0 15 2 1727.8591 O75319;O75319-2;C9JGC8;C9JYA6 O75319 132 146 DUSP11 RNA/RNP complex-1-interacting phosphatase yes no 3;4 9.0732E-08 95.428 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 18047000 0 1578500 2716600 1060000 1901000 10791000 2857 739 2891 12632;12633;12634;12635;12636;12637;12638 8375;8376;8377;8378;8379;8380;8381 8378 7 HAVSEGTKAVTK LLPGELAKHAVSEGTK EGTKAVTKYTSSK___ K H A T K Y 2 0 0 0 0 0 1 1 1 0 0 2 0 0 0 1 2 0 0 2 0 12 1 1226.6619 Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q5QNW6-2;B4DR52;Q99880;P57053;Q96A08 Q99879 110 121 HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS;HIST1H2BA Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 1-A no no 3 0.0016751 90.434 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 6303000 893280 2227400 1612900 802940 766470 0 2858 119 2892 12639;12640;12641;12642;12643 8382;8383;8384 8383 3 HCEDGICTVTAGPK HAHSLVGKHCEDGICT CTVTAGPKDMVVGFAN K H C P K D 1 0 0 1 2 0 1 2 1 1 0 1 0 0 1 0 2 0 0 1 0 14 0 1543.6759 D6RH30;P19838;P19838-2;D6RC45 D6RH30 126 139 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes no 3 1.0909E-07 96.059 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 9165600 607070 1752700 1433000 426440 1353200 3593200 2859 329 2893 12644;12645;12646;12647;12648;12649 8385;8386 8385 2 HCFLQKPSVAHFGSEK AQQHFHRKHCFLQKPS VAHFGSEKSNLYKFTA K H C E K S 1 0 0 0 1 1 1 1 2 0 1 2 0 2 1 2 0 0 0 1 0 16 1 1870.9148 Q9Y4E5-2;E9PH99;Q9Y4E5 Q9Y4E5-2 812 827 ZNF451 Zinc finger protein 451 yes no 4 0.017462 41.542 By matching By matching By matching By matching By matching By MS/MS 1 1 1 9470400 0 373810 0 0 2808300 6288300 2860 436 2894 12650;12651;12652 8387 8387 1 HCPSAVVPVELQK GFQDYIEKHCPSAVVP VVPVELQKLARGSLVG K H C Q K L 1 0 0 0 1 1 1 0 1 0 1 1 0 0 2 1 0 0 0 3 0 13 0 1462.7602 Q9NZB2;Q9NZB2-6;Q9NZB2-4;Q9NZB2-2;Q9NZB2-5 Q9NZB2 13 25 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 2 0.025608 46.159 By MS/MS By matching By matching By matching By matching By matching 1 448080 448080 0 0 0 0 0 2861 1566 2895 12653 8388 8388 1 HCSQVDSVRGFGGK EYQSKLSKHCSQVDSV SVRGFGGKFGVQMDRV K H C G K F 0 1 0 1 1 1 0 3 1 0 0 1 0 1 0 2 0 0 0 2 0 14 1 1532.7154 Q14247;Q14247-3;Q14247-2;H7C314 Q14247 111 124 CTTN Src substrate cortactin yes no 3 8.6484E-42 121.21 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 11806000 2537500 2428800 0 1306200 2341400 3192500 2862 1104 2896 12654;12655;12656;12657;12658;12659 8389;8390;8391;8392;8393;8394;8395 8391 7 HDEEDYVEMK ASETDLAKHDEEDYVE EEDYVEMKEQMYQDKL K H D M K E 0 0 0 2 0 0 3 0 1 0 0 1 1 0 0 0 0 0 1 1 0 10 0 1293.5183 Q9H7L9 Q9H7L9 60 69 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 yes yes 2 0.0018419 102.95 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2258600 0 556750 295230 0 0 1406600 2863 1500 2897 12660;12661;12662 8396;8397 8396 2 HDELTYF NYQTNKAKHDELTYF_ KHDELTYF________ K H D Y F - 0 0 0 1 0 0 1 0 1 0 1 0 0 1 0 0 1 0 1 0 0 7 0 923.4025 P04080 P04080 92 98 CSTB Cystatin-B yes yes 1;2 0.0079774 97.596 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 1 1 1 1 164520000 28687000 18281000 38078000 5976200 46606000 26897000 2864 786 2898 12663;12664;12665;12666;12667;12668;12669 8398;8399;8400;8401;8402;8403 8399 6 HDGRGIIVDAR ELIKNCNKHDGRGIIV RGIIVDARQLPSPEPC K H D A R Q 1 2 0 2 0 0 0 2 1 2 0 0 0 0 0 0 0 0 0 1 0 11 1 1207.6422 Q5VVJ2;Q5VVJ2-2 Q5VVJ2 326 336 MYSM1 Histone H2A deubiquitinase MYSM1 yes no 3 0.02964 51.727 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2002000 0 761690 457570 0 782750 0 2865 1207 2899 12670;12671;12672 8404 8404 1 HDVGAYMLMYK WLTKMSGKHDVGAYML GAYMLMYKGANRTETV K H D Y K G 1 0 0 1 0 0 0 1 1 0 1 1 2 0 0 0 0 0 2 1 0 11 0 1326.6101 P78527;E7EUY0;P78527-2 P78527 3850 3860 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 1.1143E-127 164.65 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 53133000 0 0 9207500 0 7621800 36303000 2866 1012 2900 12673;12674;12675 8405;8406 8405 2 HDVKFPLDSTGSELKQK KIIWNKTKHDVKFPLD TGSELKQKIHSITGLP K H D Q K I 0 0 0 2 0 1 1 1 1 0 2 3 0 1 1 2 1 0 0 1 0 17 2 1928.0003 H3BRL3;O14562;H3BUM8 H3BRL3 88 104 UBFD1 Ubiquitin domain-containing protein UBFD1 yes no 3;4 0.003421 49.621 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 2 1 2 19140000 1438800 2786000 3185100 1147000 0 10583000 2867 644 2901 12676;12677;12678;12679;12680;12681;12682;12683 8407;8408;8409;8410 8410 4 HEADANPRAGLIPSK DATWWQAKHEADANPR RAGLIPSKHFQERRLA K H E S K H 3 1 1 1 0 0 1 1 1 1 1 1 0 0 2 1 0 0 0 0 0 15 1 1574.8165 Q5T2T1;B4DWL9 Q5T2T1 277 291 MPP7 MAGUK p55 subfamily member 7 yes no 3 0.0027599 64.224 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 4102600 421640 436300 874370 466500 804310 1099500 2868 1190 2902 12684;12685;12686;12687;12688;12689 8411;8412;8413 8413 3 HECQANGPEDLNR KKKFQGIKHECQANGP NGPEDLNRACIAEKLG K H E N R A 1 1 2 1 1 1 2 1 1 0 1 0 0 0 1 0 0 0 0 0 0 13 0 1538.6532 P60981;P60981-2 P60981 133 145 DSTN Destrin yes no 3 0.0012826 74.987 By matching By matching By matching By matching By matching By MS/MS 1 1 1260200 0 199410 0 0 0 1060800 2869 980 2903 12690;12691 8414;8415 8414 2 HECQANGPEDLNRACIAEK KKKFQGIKHECQANGP NRACIAEKLGGSLIVA K H E E K L 3 1 2 1 2 1 3 1 1 1 1 1 0 0 1 0 0 0 0 0 0 19 1 2210.9797 P60981;P60981-2 P60981 133 151 DSTN Destrin yes no 3;4 0.00036971 68.41 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 2 1 1 3 17586000 435170 1676900 5342600 698570 2587600 6845200 2870 980 2904 12692;12693;12694;12695;12696;12697;12698;12699;12700 8416;8417;8418;8419;8420 8419 5 HECQNLESEPIRNSVK LMKVMKTKHECQNLES EPIRNSVKERESERNQ K H E V K E 0 1 2 0 1 1 3 0 1 1 1 1 0 0 1 2 0 0 0 1 0 16 1 1938.9218 P49454 P49454 1164 1179 CENPF Centromere protein F yes yes 3 0.0031603 54.393 By matching By matching By matching By matching By matching By MS/MS 1 1027700 0 0 0 0 0 1027700 2871 936 2905 12701 8421 8421 1 HEEQSNEDIPIAEQSSK VDANTAIKHEEQSNED PIAEQSSKDIPVTAQP K H E S K D 1 0 1 1 0 2 4 0 1 2 0 1 0 0 1 3 0 0 0 0 0 17 0 1939.8759 Q12888;Q12888-2;A6NNK5;F8VY86;C9JXV0 Q12888 218 234 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.00090636 73.498 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 15603000 0 2283600 2101000 2760700 3689300 4768400 2872 1063 2906 12702;12703;12704;12705;12706 8422;8423 8423 2 HELQANCYEEVKDR KKKLTGIKHELQANCY CYEEVKDRCTLAEKLG K H E D R C 1 1 1 1 1 1 3 0 1 0 1 1 0 0 0 0 0 0 1 1 0 14 1 1789.8053 E9PP50;P23528;G3V1A4;E9PK25 E9PP50 133 146 CFL1 Cofilin-1 yes no 3 0.0030109 61.444 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2592600 0 586480 0 0 616630 1389500 2873 461 2907 12707;12708;12709 8424;8425 8424 2 HEPVQPSAHHSAEPAEAGK KKEEKEGKHEPVQPSA AEPAEAGKAETSEGSG K H E G K A 4 0 0 0 0 1 3 1 3 0 0 1 0 0 3 2 0 0 0 1 0 19 0 1977.9293 P51608-2;P51608;B5MCB4;F8WAB7;F5H1U8 P51608-2 55 73 MECP2 Methyl-CpG-binding protein 2 yes no 4 0.00096931 58.461 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 2 1 4552000 679160 659840 548030 0 1420100 1244800 2874 953 2908 12710;12711;12712;12713;12714;12715 8426;8427;8428 8428 3 HEQADEDLLSQYENGSSTVVEAK KDFAPSEKHEQADEDL SSTVVEAKTSEARPFN K H E A K T 2 0 1 2 0 2 4 1 1 0 2 1 0 0 0 3 1 0 1 2 0 23 0 2548.1565 Q92547 Q92547 483 505 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 3 0 200.14 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 90746000 23449000 0 0 26667000 0 40630000 2875 1351 2909 12716;12717;12718 8429;8430;8431;8432;8433 8430 5 HEQGLSTALSVEK REGQGLGKHEQGLSTA STALSVEKTSKRGGKI K H E E K T 1 0 0 0 0 1 2 1 1 0 2 1 0 0 0 2 1 0 0 1 0 13 0 1397.7151 Q96I25;H0Y6J6;Q5W012 Q96I25 257 269 RBM17 Splicing factor 45 yes no 2;3 2.3398E-131 157.35 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 1 2 1 2 45157000 5290500 9929200 4312600 9936900 859220 14829000 2876 1395 2910 12719;12720;12721;12722;12723;12724;12725;12726;12727;12728 8434;8435;8436;8437;8438;8439;8440;8441;8442 8439 9 HEQGLSTALSVEKTSK REGQGLGKHEQGLSTA LSVEKTSKRGGKIIVG K H E S K R 1 0 0 0 0 1 2 1 1 0 2 2 0 0 0 3 2 0 0 1 0 16 1 1713.8897 Q96I25;H0Y6J6;Q5W012 Q96I25 257 272 RBM17 Splicing factor 45 yes no 3 0.03924 37.042 By MS/MS By matching By matching By matching By matching By matching 1 797620 797620 0 0 0 0 0 2877 1395 2911 12729 8443 8443 1 HERFQSLSFPHTK NLASRNLKHERFQSLS SLSFPHTKEMMKIFHK K H E T K E 0 1 0 0 0 1 1 0 2 0 1 1 0 2 1 2 1 0 0 0 0 13 1 1612.811 P54132;F5H7R6;H0YNU5 P54132 641 653 BLM Bloom syndrome protein yes no 4 9.1931E-06 99.732 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 8005100 0 0 2210100 976830 2044500 2773800 2878 965 2912 12730;12731;12732;12733 8444;8445 8445 2 HEYELNSTPDKK AYEELRQKHEYELNST LNSTPDKKDYEQPTCA K H E K K D 0 0 1 1 0 0 2 0 1 0 1 2 0 0 1 1 1 0 1 0 0 12 1 1459.6943 Q9UK61-2;Q9UK61-3;Q9UK61-4;Q9UK61 Q9UK61-2 416 427 FAM208A Protein FAM208A yes no 3 0.0021198 65.842 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1144100 0 345030 441000 0 0 358080 2879 1600 2913 12734;12735;12736 8446;8447 8447 2 HFADGLETDGTLQK SSLSEELKHFADGLET ETDGTLQKCFEDSNGK K H F Q K C 1 0 0 2 0 1 1 2 1 0 2 1 0 1 0 0 2 0 0 0 0 14 0 1530.7314 Q9H410;B4DWT2;Q5JW53;Q5JW54;Q9H410-2;Q5JW58;Q9H410-3;Q5JW57 Q9H410 177 190 DSN1 Kinetochore-associated protein DSN1 homolog yes no 2;3 0.0010777 79.886 By matching By MS/MS By matching By matching By MS/MS By MS/MS 2 1 1 1 2 6819900 1062200 797260 0 406870 1409400 3144100 2880 1488 2914 12737;12738;12739;12740;12741;12742;12743 8448;8449;8450;8451;8452 8451 5 HFCGGTLISPK VSLRRSSRHFCGGTLI GGTLISPKWVLTAAHC R H F P K W 0 0 0 0 1 0 0 2 1 1 1 1 0 1 1 1 1 0 0 0 0 11 0 1215.607 CON__P06868 CON__P06868 607 617 yes yes 2 1.5856E-29 125.23 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 22230000 2508600 1710400 1527000 2055300 5469800 8958900 + 2881 295 2915 12744;12745;12746;12747;12748;12749 8453;8454;8455 8453 3 HFEEHNSMNELKQPINK QYIERKKKHFEEHNSM ELKQPINKGGVRTPVP K H F N K G 0 0 3 0 0 1 3 0 2 1 1 2 1 1 1 1 0 0 0 0 0 17 1 2093.9953 Q9BXS6-2;Q9BXS6-3;E7ERR5;H0YMD2;Q9BXS6-4 Q9BXS6-2 209 225 NUSAP1 Nucleolar and spindle-associated protein 1 no no 4 0.0034214 66.674 By matching By matching By matching By matching By matching By MS/MS 1 1587700 0 0 0 0 0 1587700 2882 1463;1464 2916 12750 8456 8456 1 HFHTQTQSLQQSVRK IQGHSAPRHFHTQTQS SLQQSVRKFSENPHVY R H F R K F 0 1 0 0 0 4 0 0 2 0 1 1 0 1 0 2 2 0 0 1 0 15 1 1823.9391 O75319 O75319 252 266 DUSP11 RNA/RNP complex-1-interacting phosphatase yes yes 4 1.2974E-08 96.464 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 6717000 0 753860 753580 974960 1508300 2726300 2883 739 2917 12751;12752;12753;12754;12755 8457;8458;8459;8460;8461 8459 5 HFILDECDK SLNLKHIKHFILDECD FILDECDKMLEQLDMR K H F D K M 0 0 0 2 1 0 1 0 1 1 1 1 0 1 0 0 0 0 0 0 0 9 0 1175.5281 H0Y6N8;H0Y4V8;H0Y6G9;H0Y557;F6S4E6;F6UN21;F6TRA5;B4DIJ6;F6WLT2;F8VZL8;H0Y7X6;H0Y7G4;Q5STU3;Q13838;Q13838-2;F8VQ10;H0Y800;F6UJC5;E9PP12;B4DP52 H0Y6N8 92 100 DDX39B Spliceosome RNA helicase DDX39B yes no 2 0.0071581 89.047 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 8918100 704960 1444000 1389600 867840 2029000 2482800 2884 91 2918 12756;12757;12758;12759;12760;12761 8462;8463;8464;8465 8462 4 HFMLSVK ISDSDKRKHFMLSVKM KHFMLSVKMFYGNSDD K H F V K M 0 0 0 0 0 0 0 0 1 0 1 1 1 1 0 1 0 0 0 1 0 7 0 860.45784 Q06330;D6R927;Q06330-5;Q06330-4;Q06330-6;Q06330-7;Q06330-3;Q06330-2;D6RBQ8;D6RA45;D6RCM1;D6R946;D6RB37 Q06330 138 144 RBPJ Recombining binding protein suppressor of hairless yes no 2 0.014319 102.71 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 11097000 1975900 0 3171200 0 0 5949500 2885 1042 2919 12762;12763;12764 8466;8467 8466 2 HFSQGSALILHQR HICDECGKHFSQGSAL SALILHQRIHSGEKPY K H F Q R I 1 1 0 0 0 2 0 1 2 1 2 0 0 1 0 2 0 0 0 0 0 13 0 1492.7899 P17028 P17028 259 271 ZNF24 Zinc finger protein 24 yes yes 3 5.5437E-74 137.09 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 21743000 1749600 2804700 3636200 2472300 263700 10816000 2886 844 2920 12765;12766;12767;12768;12769;12770 8468;8469;8470;8471;8472;8473 8471 6 HFTILDAPGHK AYFETEKKHFTILDAP ILDAPGHKSFVPNMIG K H F H K S 1 0 0 1 0 0 0 1 2 1 1 1 0 1 1 0 1 0 0 0 0 11 0 1234.6459 H3BR35;P15170;P15170-2;F5GWG9;Q8IYD1;H3BSV8 H3BR35 159 169 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 3 0.0033714 79.07 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 14241000 730600 2766100 1934200 1096300 2488300 5225500 2887 642 2921 12771;12772;12773;12774;12775;12776 8474;8475;8476 8474 3 HFVGILNK LKCNTLCRHFVGILNK HFVGILNKTSGQMEVY R H F N K T 0 0 1 0 0 0 0 1 1 1 1 1 0 1 0 0 0 0 0 1 0 8 0 926.53379 Q9GZS1-2;Q9GZS1;B4DW33 Q9GZS1-2 87 94 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes no 2 0.0061215 107.32 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 9595900 0 1024900 0 0 3680900 4890100 2888 1475 2922 12777;12778;12779 8477;8478 8477 2 HFYLSPLDNSK RRRSAVWKHFYLSPLD LSPLDNSKAVCIHCMN K H F S K A 0 0 1 1 0 0 0 0 1 0 2 1 0 1 1 2 0 0 1 0 0 11 0 1319.651 O75132 O75132 293 303 ZBED4 Zinc finger BED domain-containing protein 4 yes yes 2 0.0043384 77.387 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5679700 0 1044000 0 865030 0 3770700 2889 737 2923 12780;12781;12782 8479 8479 1 HGATLVHCAAGVSR KIHSVSRKHGATLVHC HCAAGVSRSATLCIAY K H G S R S 3 1 0 0 1 0 0 2 2 0 1 0 0 0 0 1 1 0 0 2 0 14 0 1434.715 O95147 O95147 104 117 DUSP14 Dual specificity protein phosphatase 14 yes yes 3 0.0011161 69.92 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 2172800 0 373740 0 205420 447410 1146200 2890 762 2924 12783;12784;12785;12786 8480;8481 8480 2 HGDEIITSTTSNYETQTFSSK TQTRTVNKHGDEIITS ETQTFSSKTEWRVRAI K H G S K T 0 0 1 1 0 1 2 1 1 2 0 1 0 1 0 4 5 0 1 0 0 21 0 2345.0659 Q6P2Q9 Q6P2Q9 2050 2070 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 3 0.00013201 62.648 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2754700 0 0 0 0 0 2754700 2891 1224 2925 12787;12788 8482;8483 8483 2 HGDLPDIQIK VVLYRSYRHGDLPDIQ DLPDIQIKHSSLITPL R H G I K H 0 0 0 2 0 1 0 1 1 2 1 1 0 0 1 0 0 0 0 0 0 10 0 1134.6033 P78527;E7EUY0;P78527-2 P78527 2777 2786 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.0020237 102.53 By matching By matching By matching By matching By matching By MS/MS 1 1 12673000 750590 0 0 0 0 11923000 2892 1012 2926 12789;12790 8484 8484 1 HGDVITIIDR IDEPVRLKHGDVITII DVITIIDRSFRYENES K H G D R S 0 1 0 2 0 0 0 1 1 3 0 0 0 0 0 0 1 0 0 1 0 10 0 1137.6142 P46013;F5H4V4;P46013-2 P46013 84 93 MKI67 Antigen KI-67 no no 2 0.013063 69.672 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 22601000 0 3484000 2228800 820960 3187100 12880000 2893 919;920 2927 12791;12792;12793;12794;12795 8485;8486 8485 2 HGEPEEDIVGLQAFQER GLGLHFYKHGEPEEDI GLQAFQERLNSYKCIT K H G E R L 1 1 0 1 0 2 4 2 1 1 1 0 0 1 1 0 0 0 0 1 0 17 0 1952.9228 E9PF10;O75694-2;B4DLT2;O75694 E9PF10 888 904 NUP155 Nuclear pore complex protein Nup155 yes no 3 1.9541E-155 151.73 By matching By matching By matching By MS/MS By matching By matching 1 36594000 0 0 0 36594000 0 0 2894 100 2928 12796 8487 8487 1 HGEVCPAGWKPGSDTIKPDVQK QAFQFTDKHGEVCPAG TIKPDVQKSKEYFSKQ K H G Q K S 1 0 0 2 1 1 1 3 1 1 0 3 0 0 3 1 1 1 0 2 0 22 2 2405.1798 Q06830 Q06830 169 190 PRDX1 Peroxiredoxin-1 yes yes 3;4;5 6.8061E-215 159.4 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 4 2 4 3 2 1074100000 2811900 233770000 142580000 73767000 148360000 472850000 2895 1044 2929 12797;12798;12799;12800;12801;12802;12803;12804;12805;12806;12807;12808;12809;12810;12811;12812 8488;8489;8490;8491;8492;8493;8494;8495 8492 8 HGGGGGGFGGGGFGSR SSFSCLSRHGGGGGGF GGGGFGSRSLVGLGGT R H G S R S 0 1 0 0 0 0 0 11 1 0 0 0 0 2 0 1 0 0 0 0 0 16 0 1319.5755 P35908;CON__P35908 P35908 46 61 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 0.0016596 67.846 By MS/MS By matching By matching By matching By MS/MS By MS/MS 2 1 2 2 1 156580000 11215000 28052000 39269000 0 32928000 45112000 + 2896 302 2930 12813;12814;12815;12816;12817;12818;12819;12820 8496;8497;8498;8499 8497 4 HGGGGGGFGGGGFGSRSLVGLGGTK SSFSCLSRHGGGGGGF LVGLGGTKSISISVAG R H G T K S 0 1 0 0 0 0 0 14 1 0 2 1 0 2 0 2 1 0 0 1 0 25 1 2132.0511 P35908;CON__P35908 P35908 46 70 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3;4 2.9015E-163 142.27 By matching By matching By matching By MS/MS By matching By matching 2 93137000 0 0 0 93137000 0 0 + 2897 302 2931 12821;12822 8500;8501 8500 2 HGGGGGGGSGPSAGSGGGGFGGSAAVAAATASGGK ________________ AATASGGKSGGGSCGG K H G G K S 7 0 0 0 0 0 0 17 1 0 0 1 0 1 1 5 1 0 0 1 0 35 0 2629.1865 Q15022 Q15022 6 40 SUZ12 Polycomb protein SUZ12 yes yes 3 2.9409E-17 55.977 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 8212700 1654300 1580100 1416500 1530200 0 2031600 2898 1126 2932 12823;12824;12825;12826;12827 8502;8503;8504;8505;8506;8507;8508 8506 7 HGHLCPIDTGLIEK TCFSVYCKHGHLCPID IDTGLIEKNIELFFSG K H G E K N 0 0 0 1 1 0 1 2 2 2 2 1 0 0 1 0 1 0 0 0 0 14 0 1588.8032 F5GX68 F5GX68 416 429 DNMT1 Cytosine-specific methyltransferase no no 2;3 2.1915E-104 147.73 By matching By matching By MS/MS By matching By matching By MS/MS 2 2 18128000 0 0 3953200 0 0 14174000 2899 487 2933 12828;12829;12830;12831 8509;8510;8511;8512 8512 4 HGIGTDATHAEHIETIKAR DLIALMEKHGIGTDAT HIETIKARMYVGLTPD K H G A R M 3 1 0 1 0 0 2 2 3 3 0 1 0 0 0 0 3 0 0 0 0 19 1 2056.045 B4DSJ0;B4DK80;Q13472-2;Q13472 B4DSJ0 60 78 TOP3A DNA topoisomerase;DNA topoisomerase 3-alpha yes no 4 0.033468 34.586 By matching By matching By matching By matching By matching By MS/MS 1 1861500 0 0 0 0 0 1861500 2900 93 2934 12832 8513 8513 1 HGISWSPEEVEEARK WFATQRLKHGISWSPE EEVEEARKKMFNGTIQ K H G R K K 1 1 0 0 0 0 4 1 1 1 0 1 0 0 1 2 0 1 0 1 0 15 1 1752.8431 Q9Y6X8 Q9Y6X8 317 331 ZHX2 Zinc fingers and homeoboxes protein 2 yes yes 3 0.027182 52.599 By matching By matching By matching By matching By matching By MS/MS 1 1 1940900 0 0 0 0 721090 1219800 2901 1664 2935 12833;12834 8514 8514 0 HGKAPILIATDVASR DWVLNEFKHGKAPILI IATDVASRGLDVEDVK K H G S R G 3 1 0 1 0 0 0 1 1 2 1 1 0 0 1 1 1 0 0 1 0 15 1 1547.8784 P17844;E7ETL9 P17844 389 403 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 3 2.7579E-08 95.822 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 2 1 73279000 0 10676000 5896100 3667300 13938000 39101000 2902 853 2936 12835;12836;12837;12838;12839;12840 8515;8516;8517 8517 3 HGKNPVMELNEK EQGPILTKHGKNPVME PVMELNEKRRGLKYEL K H G E K R 0 0 2 0 0 0 2 1 1 0 1 2 1 0 1 0 0 0 0 1 0 12 1 1394.6976 Q12906-5;Q12906-4;Q12906-2;Q12906-6;Q12906-3;C9JFV5;Q12906;G5E9M5;B4DFG4 Q12906-5 524 535 ILF3 Interleukin enhancer-binding factor 3 yes no 3 0.0078298 61.419 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 8180500 0 1433900 0 0 2283500 4463100 2903 243 2937 12841;12842;12843 8518;8519 8518 2 HGKPTDSTPATWK IKQGLLDKHGKPTDST DSTPATWKQEYVDYSE K H G W K Q 1 0 0 1 0 0 0 1 1 0 0 2 0 0 2 1 3 1 0 0 0 13 1 1424.7048 O60832;O60832-2;H7C2Q2 O60832 401 413 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 3 2.5486E-24 117.27 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 34422000 6432900 4661500 193270 3045700 11858000 8230200 2904 733 2938 12844;12845;12846;12847;12848;12849;12850 8520;8521;8522;8523;8524;8525 8524 6 HGKPTDSTPATWKQEYVDYSESAK IKQGLLDKHGKPTDST VDYSESAKKEVVAEVV K H G A K K 2 0 0 2 0 1 2 1 1 0 0 3 0 0 2 3 3 1 2 1 0 24 2 2724.2667 O60832 O60832 401 424 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 4 1.4057E-07 63.536 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 22578000 10139000 0 8251300 2405500 1782400 0 2905 733 2939 12851;12852;12853;12854 8526;8527;8528;8529 8527 4 HGLAHDEMKSPREPGYK ISPSTFRKHGLAHDEM SPREPGYKAEGKYKDD K H G Y K A 1 1 0 1 0 0 2 2 2 0 1 2 1 0 2 1 0 0 1 0 0 17 2 1950.937 Q9Y2W1 Q9Y2W1 689 705 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 4 0.0065223 45.438 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 2091600 0 0 0 927810 0 1163800 2906 1639 2940 12855;12856 8530;8531 8531 2 HGLQGASLGHAAAAQAHLSCR LAACEPLKHGLQGASL AQAHLSCRDLPLGQPH K H G C R D 6 1 0 0 1 2 0 3 3 0 3 0 0 0 0 2 0 0 0 0 0 21 0 2112.0395 Q5TGY3 Q5TGY3 1427 1447 AHDC1 AT-hook DNA-binding motif-containing protein 1 yes yes 4 2.2455E-05 60.669 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 5720000 0 1052000 1408900 0 0 3259200 2907 1199 2941 12857;12858;12859 8532;8533 8532 2 HGSASFVSLLK SEAEAPDKHGSASFVS ASFVSLLKSSVNSHMT K H G L K S 1 0 0 0 0 0 0 1 1 0 2 1 0 1 0 3 0 0 0 1 0 11 0 1144.6241 Q9NXV6 Q9NXV6 239 249 CDKN2AIP CDKN2A-interacting protein yes yes 2 2.5693E-25 134.3 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 21633000 0 0 5205500 0 5218600 11209000 2908 1560 2942 12860;12861;12862 8534;8535 8534 1 HGYAPSDLPVKAK FRIRCGMKHGYAPSDL SDLPVKAKRSTYNYSL K H G A K R 2 0 0 1 0 0 0 1 1 0 1 2 0 0 2 1 0 0 1 1 0 13 1 1381.7354 Q5T7U1;Q9Y5Q8-2;H7BY84;Q9Y5Q8;Q9Y5Q8-3;H0Y5D2;H0Y3Y0;C9J393;H9KV68;Q5T7U0 Q5T7U1 260 272 GTF3C5 General transcription factor 3C polypeptide 5 yes no 3 4.2444E-60 134.75 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 42516000 3161400 4330700 8298900 4271600 8050100 14403000 2909 657 2943 12863;12864;12865;12866;12867;12868 8536;8537;8538;8539;8540;8541 8538 6 HGYIPGKNRDLK DPILISLKHGYIPGKN PGKNRDLKVVKKNILD K H G L K V 0 1 1 1 0 0 0 2 1 1 1 2 0 0 1 0 0 0 1 0 0 12 2 1396.7575 Q9ULV4;A7MAP0;B4E3S0;H0YHL7 Q9ULV4 392 403 CORO1C Coronin-1C;Coronin yes no 3 0.0061123 87.568 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 2492900 0 912040 980970 0 0 599880 2910 33 2944 12869;12870;12871 8542;8543 8542 2 HHAQETLHYQNLAK QQQALQSRHHAQETLH LHYQNLAKYQHYGQQG R H H A K Y 2 0 1 0 0 2 1 0 3 0 2 1 0 0 0 0 1 0 1 0 0 14 0 1688.8383 Q7Z5J4-3;E7EVZ3;Q7Z5J4;A8MTC3;Q7Z5J4-2;C9JWB0;A8MXE8;Q7Z5J4-4;E7ETW1 Q7Z5J4-3 297 310 RAI1 Retinoic acid-induced protein 1 yes no 4 0.0027846 59.227 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 3567400 0 0 2020200 0 1547200 0 2911 39 2945 12872;12873 8544;8545 8545 2 HHFDQPSVAPGK LDKKGPQKHHFDQPSV QPSVAPGKNYSFTREE K H H G K N 1 0 0 1 0 1 0 1 2 0 0 1 0 1 2 1 0 0 0 1 0 12 0 1318.6418 Q9P2B7-2;Q9P2B7 Q9P2B7-2 364 375 KIAA1430 UPF0501 protein KIAA1430 yes no 3 0.0028879 69.864 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 2884600 0 531660 0 507070 721500 1124400 2912 1577 2946 12874;12875;12876;12877 8546 8546 1 HHLQPENPGPGGAAPSLEQNR RRRKKKKKHHLQPENP APSLEQNRGREPEASG K H H N R G 2 1 2 0 0 2 2 3 2 0 2 0 0 0 4 1 0 0 0 0 0 21 0 2205.0675 Q14684-2;Q14684 Q14684-2 389 409 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 4 0.03995 35.992 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 3131100 289420 847780 0 786340 1207500 0 2913 1111 2947 12878;12879;12880;12881 8547 8547 0 HHTDQRDYICEYCAR KQLLRHAKHHTDQRDY YICEYCARAFKSSHNL K H H A R A 1 2 0 2 2 1 1 0 2 1 0 0 0 0 0 0 1 0 2 0 0 15 1 2022.8425 Q96JP5-2;H9KV86;Q96JP5;H3BTR0 Q96JP5-2 365 379 ZFP91;ZFP91-CNTF E3 ubiquitin-protein ligase ZFP91 yes no 4 0.00064164 73.877 By MS/MS By matching By matching By matching By MS/MS By matching 1 2 1 1 16060000 4386100 0 2689200 0 4714900 4269600 2914 677 2948 12882;12883;12884;12885;12886 8548;8549 8548 2 HHTLRQAPQPQSSLQR SKQETIMRHHTLRQAP QPQSSLQRGIPTSARS R H H Q R G 1 2 0 0 0 4 0 0 2 0 2 0 0 0 2 2 1 0 0 0 0 16 1 1882.9874 Q8WXI9 Q8WXI9 505 520 GATAD2B Transcriptional repressor p66-beta yes yes 4 0.0033481 66.246 By matching By MS/MS By matching By matching By matching By matching 1 1492000 0 1492000 0 0 0 0 2915 1344 2949 12887 8550 8550 1 HIENICACGK LSSHYLAKHIENICAC ENICACGKCGQILVKG K H I G K C 1 0 1 0 2 0 1 1 1 2 0 1 0 0 0 0 0 0 0 0 0 10 0 1200.538 Q9Y2K1;Q9Y2K1-2 Q9Y2K1 443 452 ZBTB1 Zinc finger and BTB domain-containing protein 1 yes no 2 0.010239 73.841 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 5500900 538710 1109700 1332500 545500 553830 1420700 2916 1633 2950 12888;12889;12890;12891;12892;12893 8551;8552;8553;8554 8552 4 HIGVGMYQHDVSQTLLK ELVKIEPKHIGVGMYQ DVSQTLLKATLDSVVE K H I L K A 0 0 0 1 0 2 0 2 2 1 2 1 1 0 0 1 1 0 1 2 0 17 0 1924.9829 Q8N5C6;Q8N5C6-2;B7Z6X7 Q8N5C6 676 692 SRBD1 S1 RNA-binding domain-containing protein 1 yes no 3 1.146E-13 100.68 By matching By matching By matching By matching By matching By MS/MS 1 33463000 0 0 0 0 0 33463000 2917 1302 2951 12894 8555 8555 149 1 HIGYDDSSKGFDYK KVVREAVKHIGYDDSS SSKGFDYKTCNVLVAL K H I Y K T 0 0 0 3 0 0 0 2 1 1 0 2 0 1 0 2 0 0 2 0 0 14 1 1630.7264 B4DN45;P31153 B4DN45 26 39 MAT2A S-adenosylmethionine synthase;S-adenosylmethionine synthase isoform type-2 yes no 3 0.0015157 69.03 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 4346300 328130 1102100 0 0 1342300 1573700 2918 106 2952 12895;12896;12897;12898 8556;8557 8556 2 HILEMNFSK EWVRHLQRHILEMNFS ILEMNFSKADPPPEES R H I S K A 0 0 1 0 0 0 1 0 1 1 1 1 1 1 0 1 0 0 0 0 0 9 0 1117.559 B7ZM82;B3KVH1;O95785;O95785-2 B7ZM82 936 944 WIZ Protein Wiz yes no 2 0.015957 74.533 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3246100 0 0 0 545500 152480 2548100 2919 212 2953 12899;12900;12901 8558 8558 1 HINPVAASLIQK KNEYSIPKHINPVAAS VAASLIQKMLQTDPTA K H I Q K M 2 0 1 0 0 1 0 0 1 2 1 1 0 0 1 1 0 0 0 1 0 12 0 1289.7456 P53350;B4E083;I3L309;I3L2H5 P53350 273 284 PLK1 Serine/threonine-protein kinase PLK1 yes no 2;3 6.3071E-12 108.68 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 1 2 1 1 2 35320000 3876400 238150 5469800 1106300 3465200 21164000 2920 962 2954 12902;12903;12904;12905;12906;12907;12908;12909;12910 8559;8560;8561;8562;8563;8564 8562 6 HIQSNLDFSPVNSASSEENVK ESPSGFSKHIQSNLDF ASSEENVKYSSSQPEP K H I V K Y 1 0 3 1 0 1 2 0 1 1 1 1 0 1 1 5 0 0 0 2 0 21 0 2301.0873 O14757-2;F5H7S4;O14757;E7EPP6 O14757-2 199 219 CHEK1 Serine/threonine-protein kinase Chk1 yes no 3 2.8558E-111 132.52 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 90190000 9186700 6600700 16609000 1168700 17058000 39566000 2921 358 2955 12911;12912;12913;12914;12915;12916 8565;8566;8567 8565 3 HITTLQASFLTK CENKFNDKHITTLQAS LQASFLTKKLNIGGKR K H I T K K 1 0 0 0 0 1 0 0 1 1 2 1 0 1 0 1 3 0 0 0 0 12 0 1358.7558 Q9UL25 Q9UL25 48 59 RAB21 Ras-related protein Rab-21 yes yes 2;3 0.0027404 73.36 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 19798000 0 5195500 0 0 0 14603000 2922 1605 2956 12917;12918;12919;12920 8568;8569;8570;8571 8571 4 HKEPGSGSGGGVYWVDSQQK VTKCGRLRHKEPGSGS YWVDSQQKRYVPVKGD R H K Q K R 0 0 0 1 0 2 1 5 1 0 0 2 0 0 1 3 0 1 1 2 0 20 1 2101.9817 Q9NQT5-2;Q9NQT5 Q9NQT5-2 88 107 EXOSC3 Exosome complex component RRP40 yes no 3 0.00023137 63.488 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4760600 0 0 944060 426110 0 3390400 2923 1532 2957 12921;12922;12923 8572 8572 1 HKLEVLESQLSEGSQK SKALHARKHKLEVLES QLSEGSQKHASLQKSI K H K Q K H 0 0 0 0 0 2 3 1 1 0 3 2 0 0 0 3 0 0 0 1 0 16 1 1810.9425 D6RCT6;D6R9E3;Q9BWT6 D6RCT6 69 84 MND1 Meiotic nuclear division protein 1 homolog yes no 3 0.037088 37.477 By matching By matching By matching By matching By matching By MS/MS 1 1 2496700 0 0 0 0 578690 1918000 2924 316 2958 12924;12925 8573 8573 1 HLAAVEERKIK ASAATKAKHLAAVEER AVEERKIKSLVALLVE K H L I K S 2 1 0 0 0 0 2 0 1 1 1 2 0 0 0 0 0 0 0 1 0 11 2 1292.7565 Q92922;Q8TAQ2-2;F8VTJ5;Q8TAQ2;F8VXC8 Q92922 883 893 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 no no 3 0.016841 72.321 By matching By matching By MS/MS By matching By matching By matching 1 2096700 0 0 2096700 0 0 0 2925 1365;539 2959 12926 8574 8574 1 HLAESESLLTSPPK EGVMHQVKHLAESESL SLLTSPPKACTNGSGS K H L P K A 1 0 0 0 0 0 2 0 1 0 3 1 0 0 2 3 1 0 0 0 0 14 0 1507.7882 Q14CA3;Q14669;Q14CF1 Q14CA3 980 993 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 2;3 9.4774E-05 78.529 By matching By matching By matching By matching By matching By MS/MS 2 1 1 2 5904300 0 1362800 755760 0 234920 3550800 2926 1122 2960 12927;12928;12929;12930;12931;12932 8575;8576 8576 1 HLAGLGLTEAIDKNK EVTHDLQKHLAGLGLT TEAIDKNKADLSRMSG K H L N K A 2 0 1 1 0 0 1 2 1 1 3 2 0 0 0 0 1 0 0 0 0 15 1 1578.873 E9PKH2;B4DN87;P50454 E9PKH2 103 117 SERPINH1 Serpin H1 yes no 3 1.4994E-06 94.781 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 14085000 2445300 0 3775500 1205400 1574000 5084700 2927 108 2961 12933;12934;12935;12936;12937 8577;8578;8579;8580 8577 4 HLAGLGLTEAIDKNKADLSR EVTHDLQKHLAGLGLT KNKADLSRMSGKKDLY K H L S R M 3 1 1 2 0 0 1 2 1 1 4 2 0 0 0 1 1 0 0 0 0 20 2 2121.1542 E9PKH2;B4DN87;P50454 E9PKH2 103 122 SERPINH1 Serpin H1 yes no 4 1.018E-65 120.99 By matching By matching By matching By MS/MS By matching By matching 1 60468000 0 0 0 60468000 0 0 2928 108 2962 12938 8581 8581 1 HLCEPGADGAETFADGVPREGLSR AYVSLFMRHLCEPGAD VPREGLSRQHVLTRIG R H L S R Q 3 2 0 2 1 0 3 4 1 0 2 0 0 1 2 1 1 0 0 1 0 24 1 2540.1714 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1440 1463 CHD4 Chromodomain-helicase-DNA-binding protein 4 no no 3;4 1.2612E-22 89.011 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 39606000 0 19059000 0 0 0 20547000 2929 486 2963 12939;12940;12941;12942 8582;8583;8584;8585 8583 3 HLCEPGADGSETFADGVPR AYVSLFMRHLCEPGAD TFADGVPREGLSRQQV R H L P R E 2 1 0 2 1 0 2 3 1 0 1 0 0 1 2 1 1 0 0 1 0 19 0 2013.8851 Q12873;E9PG89;Q12873-2 Q12873 1462 1480 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 3 0.015674 37.85 By matching By MS/MS By matching By matching By matching By matching 1 821770 0 821770 0 0 0 0 2930 430 2964 12943 8586 8586 1 HLCQQLQAEQAAAEK VSELLPAKHLCQQLQA AEQAAAEKRHREELEQ K H L E K R 4 0 0 0 1 4 2 0 1 0 2 1 0 0 0 0 0 0 0 0 0 15 0 1723.8312 Q14980-2;Q14980;F5H2L0;H0YFY6 Q14980-2 1365 1379 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2;3 1.5735E-124 149.22 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 3 2 115090000 15902000 14071000 23131000 14223000 25616000 22144000 2931 1121 2965 12944;12945;12946;12947;12948;12949;12950;12951;12952;12953;12954;12955;12956;12957;12958 8587;8588;8589;8590;8591;8592;8593;8594;8595;8596;8597 8589 11 HLEAQGTSLPK LLKSNRLKHLEAQGTS AQGTSLPKKLECIKTS K H L P K K 1 0 0 0 0 1 1 1 1 0 2 1 0 0 1 1 1 0 0 0 0 11 0 1179.6248 A8MVI8;Q6NW34-2;Q6NW34;E7ENV3 A8MVI8 269 279 C3orf17 Uncharacterized protein C3orf17 yes no 2 0.0026696 86.344 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 11063000 2285700 1304200 1933300 1097000 2057600 2385000 2932 49 2966 12959;12960;12961;12962;12963;12964 8598;8599;8600;8601;8602;8603 8601 6 HLEAQGTSLPKK LLKSNRLKHLEAQGTS QGTSLPKKLECIKTSI K H L K K L 1 0 0 0 0 1 1 1 1 0 2 2 0 0 1 1 1 0 0 0 0 12 1 1307.7197 A8MVI8;Q6NW34-2;Q6NW34;E7ENV3 A8MVI8 269 280 C3orf17 Uncharacterized protein C3orf17 yes no 3 0.0033385 62.799 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 4119200 623690 472010 445910 365980 930080 1281500 2933 49 2967 12965;12966;12967;12968;12969;12970 8604;8605;8606 8605 3 HLEHAPSPSDVSNAPEVK ANPPELQKHLEHAPSP VSNAPEVKAGVNSDSP K H L V K A 2 0 1 1 0 0 2 0 2 0 1 1 0 0 3 3 0 0 0 2 0 18 0 1912.9279 Q9Y4C1;F5H4E6;F5H070;F8WE62 Q9Y4C1 439 456 KDM3A Lysine-specific demethylase 3A yes no 3 0.00052278 81.01 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 7634200 1194100 1107700 1511000 806320 986560 2028500 2934 516 2968 12971;12972;12973;12974;12975;12976 8607;8608;8609;8610 8608 3 HLEQQQGQLEVPEQQVGQPK EEQEGQLKHLEQQQGQ EQQVGQPKNLEQEEKQ K H L P K N 0 0 0 0 0 7 3 2 1 0 2 1 0 0 2 0 0 0 0 2 0 20 0 2299.1557 P07476 P07476 442 461 IVL Involucrin yes yes 3 0.0010484 52.866 By matching By matching By matching By matching By MS/MS By matching 1 1259600 0 0 0 0 1259600 0 2935 802 2969 12977 8611;8612 8612 2 HLESFYEKPPPGLIK AQQLQQLKHLESFYEK KPPPGLIKEDETKPED K H L I K E 0 0 0 0 0 0 2 1 1 1 2 2 0 1 3 1 0 0 1 0 0 15 1 1753.9403 Q8TA86 Q8TA86 47 61 RP9 Retinitis pigmentosa 9 protein yes yes 3 0.00080673 78.401 By matching By matching By matching By MS/MS By matching By matching 1 3525800 0 0 0 3525800 0 0 2936 1333 2970 12978 8613 8613 1 HLIVLINK LAKTAGVKHLIVLINK HLIVLINKMDDPTVNW K H L N K M 0 0 1 0 0 0 0 0 1 2 2 1 0 0 0 0 0 0 0 1 0 8 0 948.61204 H3BR35;P15170;P15170-2;F5GWG9;Q8IYD1 H3BR35 220 227 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 2 5.0788E-25 134.66 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 15757000 997820 2073300 2170500 957290 1302900 8254700 2937 642 2971 12979;12980;12981;12982;12983;12984 8614;8615;8616;8617 8614 4 HLKPEQPADGVSAVDLEK EGRLKARKHLKPEQPA VSAVDLEKLEARKRRF K H L E K L 2 0 0 2 0 1 2 1 1 0 2 2 0 0 2 1 0 0 0 2 0 18 1 1931.9953 Q96T58 Q96T58 963 980 SPEN Msx2-interacting protein yes yes 3 0.003593 56.424 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 9760200 1669100 1992100 1409000 779340 1987800 1922900 2938 1422 2972 12985;12986;12987;12988;12989;12990 8618;8619;8620 8620 1 HLLEGQNASVLAYGPTGAGK GSVQPILRHLLEGQNA YGPTGAGKTHTMLGSP R H L G K T 3 0 1 0 0 1 1 4 1 0 3 1 0 0 1 1 1 0 1 1 0 20 0 1982.0221 Q14807;B7Z265;H3BRB3;H3BTH5 Q14807 114 133 KIF22 Kinesin-like protein KIF22 yes no 3 1.4803E-122 141.74 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 45434000 6292100 16268000 0 0 0 22874000 2939 1115 2973 12991;12992;12993 8621;8622;8623;8624 8623 4 HLLSYCPMPEK GCGPRFGKHLLSYCPM SYCPMPEKTFTTTPGG K H L E K T 0 0 0 0 1 0 1 0 1 0 2 1 1 0 2 1 0 0 1 0 0 11 0 1373.6472 Q14641 Q14641 38 48 INSL4 Early placenta insulin-like peptide;Early placenta insulin-like peptide B chain;Early placenta insulin-like peptide A chain yes yes 2 0.0054004 72.289 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 3010500 0 535580 552790 0 0 1922200 2940 1108 2974 12994;12995;12996 8625;8626;8627 8626 3 HLLVSNVGGDGEEIER LRPVDQLRHLLVSNVG GDGEEIERFFKLHQED R H L E R F 0 1 1 1 0 0 3 3 1 1 2 0 0 0 0 1 0 0 0 2 0 16 0 1722.8537 E9PF10;O75694-2;B4DLT2;O75694 E9PF10 522 537 NUP155 Nuclear pore complex protein Nup155 yes no 3 0.0026063 54.281 By matching By matching By matching By matching By matching By MS/MS 1 1 1893900 713170 0 0 0 0 1180700 2941 100 2975 12997;12998 8628 8628 1 HLMLLSR AAGGDMKKHLMLLSRA KHLMLLSRAADSICDG K H L S R A 0 1 0 0 0 0 0 0 1 0 3 0 1 0 0 1 0 0 0 0 0 7 0 868.49529 P35251-2;P35251 P35251-2 903 909 RFC1 Replication factor C subunit 1 yes no 2 0.040617 77.741 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4926200 0 652620 0 0 1171100 3102500 2942 896 2976 12999;13000;13001 8629 8629 1 HLPESLYPHTYNPK LDCAQECKHLPESLYP YPHTYNPKMSLDISAV K H L P K M 0 0 1 0 0 0 1 0 2 0 2 1 0 0 3 1 1 0 2 0 0 14 0 1694.8417 Q92547 Q92547 983 996 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 3 0.00027685 74.78 By matching By matching By matching By matching By matching By MS/MS 2 2 1 2 2 2 10028000 1195200 1412300 698980 1447400 799610 4474400 2943 1351 2977 13002;13003;13004;13005;13006;13007;13008;13009;13010;13011;13012 8630;8631 8631 1 HLPNLQTHKENPVLDVVSNPEQTAGEERGDGNSGFNEHLK SHFSMLSRHLPNLQTH SGFNEHLKENKVADPV R H L L K E 1 1 5 2 0 2 5 4 3 0 4 2 0 1 3 2 2 0 0 3 0 40 2 4406.1276 Q12888;Q12888-2;A6NNK5;F8VY86;C9JXV0 Q12888 46 85 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 6 0.00079795 20.78 By matching By matching By matching By matching By matching By MS/MS 1 14573000 0 0 0 0 0 14573000 2944 1063 2978 13013 8632 8632 1 HLQLAIRNDEELNK KKTRIIPRHLQLAIRN RNDEELNKLLGKVTIA R H L N K L 1 1 2 1 0 1 2 0 1 1 3 1 0 0 0 0 0 0 0 0 0 14 1 1691.8955 Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;H0YFX9;Q96QV6;P16104;Q9BTM1-2;C9JE22 Q99878 83 96 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AA;H2AFX Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A;Histone H2A type 1-A;Histone H2A.x yes no 3 1.5215E-06 95.094 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 22532000 2010800 13129000 1371100 0 2675500 3345200 2945 792 2979 13014;13015;13016;13017;13018 8633;8634 8633 2 HLSLQPFQK PATKDSIKHLSLQPFQ LSLQPFQKGFIIQPDS K H L Q K G 0 0 0 0 0 2 0 0 1 0 2 1 0 1 1 1 0 0 0 0 0 9 0 1096.6029 Q92766-3;Q92766;Q92766-2;C9JU34 Q92766-3 436 444 RREB1 Ras-responsive element-binding protein 1 yes no 2 0.023859 67.704 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4879000 0 1097800 1096600 702910 0 1981700 2946 1357 2980 13019;13020;13021;13022 8635;8636 8635 2 HLSSQNRYFSEADKIK GSLDAMDKHLSSQNRY FSEADKIKVAQGVSGA K H L I K V 1 1 1 1 0 1 1 0 1 1 1 2 0 1 0 3 0 0 1 0 0 16 2 1921.9646 H0Y4R1;P12268 H0Y4R1 379 394 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes no 4 0.0003 71.529 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 12432000 1447600 1156100 1258200 1790700 4025800 2753500 2947 610 2981 13023;13024;13025;13026;13027;13028 8637;8638;8639;8640;8641;8642;8643 8640 5 HLTDPSYGIPREQQK LPSGPSLKHLTDPSYG GIPREQQKAALQELTR K H L Q K A 0 1 0 1 0 2 1 1 1 1 1 1 0 0 2 1 1 0 1 0 0 15 1 1767.8904 F8WDS4;F8WAK7;F8WBB9;F8WCS3;C9JJG2;C9JS83;F8W898;Q9H9Y6-2;Q9H9Y6;F5GZX4 F8WDS4 18 32 POLR1B DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA2 yes no 3 0.0027522 64.104 By matching By matching By matching By matching By MS/MS By matching 1 1 1 4277900 614150 0 0 0 1332000 2331700 2948 254 2982 13029;13030;13031 8644 8644 1 HLTYNDFINK FLYGTATKHLTYNDFI TYNDFINKELILFSNS K H L N K E 0 0 2 1 0 0 0 0 1 1 1 1 0 1 0 0 1 0 1 0 0 10 0 1263.6248 Q02880-2;Q02880;E9PCY5 Q02880-2 708 717 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 2 1.3958E-115 152.54 By matching By matching By matching By matching By matching By MS/MS 1 6604000 0 0 0 0 0 6604000 2949 1035 2983 13032 8645 8645 1 HLVAAATAQRPTHR PIVPLKSRHLVAAATA TAQRPTHR________ R H L H R - 4 2 0 0 0 1 0 0 2 0 1 0 0 0 1 0 2 0 0 1 0 14 1 1527.8382 I3L4J3;Q7Z3B3;C9JHY2;I3L0X0;B3KT49;E9PCT4;Q7Z3B3-2 I3L4J3 1028 1041 KANSL1;KIAA1267 KAT8 regulatory NSL complex subunit 1 yes no 3 0.024941 43.405 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1438900 0 264210 475500 0 306190 393040 2950 247 2984 13033;13034;13035;13036 8646;8647 8647 2 HLVDEPQNLIK STVFDKLKHLVDEPQN DEPQNLIKQNCDQFEK K H L I K Q 0 0 1 1 0 1 1 0 1 1 2 1 0 0 1 0 0 0 0 1 0 11 0 1304.7089 CON__P02769 CON__P02769 402 412 yes yes 2 0.0097609 65.179 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6736800 0 1500900 765480 0 1281000 3189500 + 2951 294 2985 13037;13038;13039;13040 8648 8648 1 HLVDEPQNLIKQNCDQFEK STVFDKLKHLVDEPQN QNCDQFEKLGEYGFQN K H L E K L 0 0 2 2 1 3 2 0 1 1 2 2 0 1 1 0 0 0 0 1 0 19 1 2354.1325 CON__P02769 CON__P02769 402 420 yes yes 3;4 0 205.98 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 2 355300000 33269000 54562000 54367000 48565000 6156200 158380000 + 2952 294 2986 13041;13042;13043;13044;13045;13046;13047;13048;13049;13050;13051 8649;8650;8651;8652;8653;8654;8655;8656;8657;8658;8659 8652 10 HLVQQEGQLEQQER VQQEGQLKHLVQQEGQ GQLEQQERQVEHLEQQ K H L E R Q 0 1 0 0 0 5 3 1 1 0 2 0 0 0 0 0 0 0 0 1 0 14 0 1720.8493 P07476 P07476 405 418 IVL Involucrin yes yes 3 0.00076162 85.837 By matching By matching By matching By matching By MS/MS By matching 1 659280 0 0 0 0 659280 0 2953 802 2987 13052 8660 8660 1 HLYEEYVEKPLK HKKHKSDKHLYEEYVE EYVEKPLKLVLKVGGN K H L L K L 0 0 0 0 0 0 3 0 1 0 2 2 0 0 1 0 0 0 2 1 0 12 1 1546.8031 Q9NPI1;Q9NPI1-2 Q9NPI1 13 24 BRD7 Bromodomain-containing protein 7 yes no 3 0.0019127 84.821 By matching By matching By matching By matching By matching By MS/MS 1 2017000 0 0 0 0 0 2017000 2954 1529 2988 13053 8661 8661 1 HMGPSRNLLLNGK LANHGQARHMGPSRNL RNLLLNGKSYPTKVRL R H M G K S 0 1 2 0 0 0 0 2 1 0 3 1 1 0 1 1 0 0 0 0 0 13 1 1435.7718 Q13330;Q13330-3;E7ESY4;E7EN71;H0Y4T7;F8W9Y9;C9JJM0;H0YIV8 Q13330 614 626 MTA1 Metastasis-associated protein MTA1 yes no 3 0.0022762 66.663 By matching By matching By MS/MS By matching By matching By matching 1 1 5067600 0 1501700 3566000 0 0 0 2955 1078 2989 13054;13055 8662 8662 1 HMIDGRWCDCKLPNSK QVKVMSQRHMIDGRWC DCKLPNSKQSQDEPLR R H M S K Q 0 1 1 2 2 0 0 1 1 1 1 2 1 0 1 1 0 1 0 0 0 16 2 2015.9128 Q13148;Q13148-2;B1AKP7;G3V162;B4DJ45 Q13148 166 181 TARDBP TAR DNA-binding protein 43 yes no 4 0.0024128 62.077 By matching By matching By matching By matching By matching By MS/MS 1 1 26340000 0 0 6728200 0 0 19612000 2956 1073 2990 13056;13057 8663 8663 1 HNADALSDRFEK LQEAKKLKHNADALSD ALSDRFEKAVYYLDAV K H N E K A 2 1 1 2 0 0 1 0 1 0 1 1 0 1 0 1 0 0 0 0 0 12 1 1401.6637 Q9UHB7 Q9UHB7 927 938 AFF4 AF4/FMR2 family member 4 yes yes 3 0.0063126 63.091 By matching By matching By matching By matching By matching By MS/MS 1 622150 0 0 0 0 0 622150 2957 1592 2991 13058 8664 8664 1 HNAVIEHLKQK SQPQVVMKHNAVIEHL VIEHLKQKKSMTPAER K H N Q K K 1 0 1 0 0 1 1 0 2 1 1 2 0 0 0 0 0 0 0 1 0 11 1 1315.7361 Q12830-4;Q12830-2;Q12830;E7ETD6 Q12830-4 2527 2537 BPTF Nucleosome-remodeling factor subunit BPTF yes no 3 0.022638 54.343 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1515800 0 0 675200 116310 183940 540330 2958 1061 2992 13059;13060;13061;13062 8665 8665 1 HNGAAEPEPEAETAR LQLGQQPRHNGAAEPE EPEAETARGTSRGQYH R H N A R G 4 1 1 0 0 0 4 1 1 0 0 0 0 0 2 0 1 0 0 0 0 15 0 1577.707 Q9Y446 Q9Y446 63 77 PKP3 Plakophilin-3 yes yes 3 0.023868 40.211 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3217900 0 374340 0 335650 735080 1772900 2959 1650 2993 13063;13064;13065;13066 8666 8666 1 HNGAAEPEPEAETARGTSR LQLGQQPRHNGAAEPE ETARGTSRGQYHTLQA R H N S R G 4 2 1 0 0 0 4 2 1 0 0 0 0 0 2 1 2 0 0 0 0 19 1 1978.9093 Q9Y446 Q9Y446 63 81 PKP3 Plakophilin-3 yes yes 3 0.015186 39.338 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 6488200 708530 1176000 511720 457320 932830 2701800 2960 1650 2994 13067;13068;13069;13070;13071;13072 8667 8667 1 HNGICIYFSR PEIVYSGKHNGICIYF GICIYFSRIMGNIWDA K H N S R I 0 1 1 0 1 0 0 1 1 2 0 0 0 1 0 1 0 0 1 0 0 10 0 1265.5975 E9PF10;O75694-2;B4DLT2;O75694 E9PF10 663 672 NUP155 Nuclear pore complex protein Nup155 yes no 3 0.0080367 75.387 By matching By matching By matching By matching By matching By MS/MS 1 1641400 0 0 0 0 0 1641400 2961 100 2995 13073 8668 8668 1 HNLMTVEQNNGSSQK FEASVKAKHNLMTVEQ QNNGSSQKKLLAPDMF K H N Q K K 0 0 3 0 0 2 1 1 1 0 1 1 1 0 0 2 1 0 0 1 0 15 0 1685.7791 F5H2U2;Q13523;H0YEC8;H0YDJ3 F5H2U2 597 611 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes no 3 0.0020159 59.634 By matching By matching By matching By matching By matching By MS/MS 1 1 1503600 0 0 0 0 673390 830210 2962 514 2996 13074;13075 8669 8669 1 HNNQQALSHSIEEGLK RVLARINKHNNQQALS HSIEEGLKIQAMNRLQ K H N L K I 1 0 2 0 0 2 2 1 2 1 2 1 0 0 0 2 0 0 0 0 0 16 0 1803.8864 Q99496 Q99496 134 149 RNF2 E3 ubiquitin-protein ligase RING2 yes yes 3 0.0021522 56.46 By matching By matching By matching By matching By matching By MS/MS 1 1 1698400 0 0 0 0 340380 1358000 2963 1424 2997 13076;13077 8670 8670 1 HNRTPENFPCK WSEQTPHKHNRTPENF TPENFPCKNLEENYCR K H N C K N 0 1 2 0 1 0 1 0 1 0 0 1 0 1 2 0 1 0 0 0 0 11 1 1398.6463 CON__P06868;P00747 CON__P06868 314 324 PLG Plasminogen;Plasmin heavy chain A;Activation peptide;Angiostatin;Plasmin heavy chain A, short form;Plasmin light chain B yes yes 3 0.0014763 91.658 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 16066000 0 3895600 2119700 815800 2620800 6614300 + 2964 295 2998 13078;13079;13080;13081;13082 8671;8672;8673;8674 8673 4 HPYLPINSAAIK LRPWHAARHPYLPINS PINSAAIKAECTARLP R H P I K A 2 0 1 0 0 0 0 0 1 2 1 1 0 0 2 1 0 0 1 0 0 12 0 1322.7347 Q13330;Q13330-3;E7ESY4;E7EN71;H0Y4T7;F8W9Y9 Q13330 498 509 MTA1 Metastasis-associated protein MTA1 yes no 2 0.0019619 87.713 By matching By matching By matching By matching By matching By MS/MS 1 1812400 0 0 0 0 0 1812400 2965 1078 2999 13083 8675 8675 1 HQACLLLQK ITGPVRPRHQACLLLQ QACLLLQKTLSMREVR R H Q Q K T 1 0 0 0 1 2 0 0 1 0 3 1 0 0 0 0 0 0 0 0 0 9 0 1109.6015 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 948 956 MYBBP1A Myb-binding protein 1A yes no 2 0.0064746 96.034 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 11200000 1436800 842430 786500 606030 2544300 4983500 2966 682 3000 13084;13085;13086;13087;13088;13089 8676;8677;8678;8679 8678 4 HQAVQLPREGQEDQGLTK VLRATLSKHQAVQLPR QEDQGLTKDFSNSPLH K H Q T K D 1 1 0 1 0 4 2 2 1 0 2 1 0 0 1 0 1 0 0 1 0 18 1 2033.029 O95758-1;O95758-6;O95758-2;O95758;O95758-5;O95758-4;B1ALY6 O95758-1 401 418 PTBP3 Polypyrimidine tract-binding protein 3 yes no 3;4 0.010354 41.695 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 2 2 1 2 2 32866000 7144100 5019000 8173900 2973100 1565100 7990800 2967 774 3001 13090;13091;13092;13093;13094;13095;13096;13097;13098;13099 8680;8681;8682;8683 8680 4 HQEGEIFDTEKEK KKKLRKPRHQEGEIFD IFDTEKEKYEITEQRK R H Q E K Y 0 0 0 1 0 1 4 1 1 1 0 2 0 1 0 0 1 0 0 0 0 13 1 1588.7369 F8W181;Q02878 F8W181 167 179 RPL6 60S ribosomal protein L6 yes no 3 0.0022755 69.352 By matching By matching By matching By matching By matching By MS/MS 1 1199200 0 0 0 0 0 1199200 2968 551 3002 13100 8684;8685 8685 2 HQEVQDQDPVFQGSDSSGYQSDHKK KKKKKKKKHQEVQDQD GYQSDHKKKKKKRKHS K H Q K K K 0 0 0 4 0 5 1 2 2 0 0 2 0 1 1 4 0 0 1 2 0 25 1 2845.2539 Q3B726 Q3B726 284 308 TWISTNB DNA-directed RNA polymerase I subunit RPA43 yes yes 4 0.0020778 47.554 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 3444700 0 987640 0 0 0 2457100 2969 1164 3003 13101;13102 8686;8687 8687 2 HQEYLNSILQHAK QERKRRQKHQEYLNSI NSILQHAKDFKEYHRS K H Q A K D 1 0 1 0 0 2 1 0 2 1 2 1 0 0 0 1 0 0 1 0 0 13 0 1579.8107 P51531-2;P51531;F6VDE0;P51532-5;P51532-2;P51532-3;P51532-4;P51532;Q9HBD4;F5H0X5 P51532-5 472 484 SMARCA2;SMARCA4 Probable global transcription activator SNF2L2;Transcription activator BRG1 no no 3 8.7167E-47 128.35 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 2 2 1 2 92428000 32831000 5644600 0 7584100 15574000 30794000 2970 952;951 3004 13103;13104;13105;13106;13107;13108;13109;13110 8688;8689;8690;8691;8692 8692 5 HQGLPQEVLNENLLR ________________ VLNENLLRFFVAPFPE K H Q L R F 0 1 2 0 0 2 2 1 1 0 4 0 0 0 1 0 0 0 0 1 0 15 0 1758.9377 CON__P02662 CON__P02662 8 22 yes yes 2;3 2.714E-230 178.22 By matching By MS/MS By MS/MS By MS/MS By matching By matching 2 1 2 443790000 0 267820000 0 175970000 0 0 + 2971 288 3005 13111;13112;13113;13114;13115 8693;8694;8695;8696 8693 4 HQGVMVGMGQK PSIVGRPRHQGVMVGM VMVGMGQKDSYVGDEA R H Q Q K D 0 0 0 0 0 2 0 3 1 0 0 1 2 0 0 0 0 0 0 2 0 11 0 1170.5638 F5H0N0;B4E335;P63261;P60709;I3L3I4;G5E9R0;I3L3R2;E7EVS6;I3L3I0;I3L1U9;E7EQV5;Q5T8M8;A6NL76;P68133;P68032;Q5T8M7;F5H1C1;P63267;P62736;C9JUM1;C9JZR7;C9JTX5;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;Q562R1 F5H0N0 40 50 ACTG1;ACTB;ACTA1;ACTC1;ACTG2;ACTA2;ACTBL2 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;Beta-actin-like protein 2 yes no 2 9.3065E-08 108.31 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 7017500 0 938560 0 784790 0 5294200 2972 164 3006 13116;13117;13118 8697;8698 8698 2 HQLEAHGAGGEPDAPK DSKKELDKHQLEAHGA GGEPDAPKKKKKRLPV K H Q P K K 3 0 0 1 0 1 2 3 2 0 1 1 0 0 2 0 0 0 0 0 0 16 0 1612.7594 Q9NUA8;F8WAI8 Q9NUA8 784 799 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes no 3;4 0.00080319 74.141 By matching By MS/MS By matching By MS/MS By matching By MS/MS 2 1 2 2 1 2 9629500 2128300 844760 1327800 2021300 620660 2686600 2973 1545 3007 13119;13120;13121;13122;13123;13124;13125;13126;13127;13128 8699;8700;8701;8702 8700 3 HQLEAHGAGGEPDAPKK DSKKELDKHQLEAHGA GEPDAPKKKKKRLPVT K H Q K K K 3 0 0 1 0 1 2 3 2 0 1 2 0 0 2 0 0 0 0 0 0 17 1 1740.8543 Q9NUA8;F8WAI8 Q9NUA8 784 800 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes no 4 0.035271 33.682 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 2345600 595780 240350 492160 474730 0 542610 2974 1545 3008 13129;13130;13131;13132;13133 8703 8703 0 HQLEAHGAGGEPDAPKKK DSKKELDKHQLEAHGA EPDAPKKKKKRLPVTC K H Q K K K 3 0 0 1 0 1 2 3 2 0 1 3 0 0 2 0 0 0 0 0 0 18 2 1868.9493 Q9NUA8;F8WAI8 Q9NUA8 784 801 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes no 4 0.0015679 55.912 By matching By matching By MS/MS By matching By matching By matching 1 1 1 3839200 292290 0 2894900 0 0 652010 2975 1545 3009 13134;13135;13136 8704 8704 1 HQLEEELR ALKAQTWKHQLEEELR HQLEEELRQQKEAACF K H Q L R Q 0 1 0 0 0 1 3 0 1 0 2 0 0 0 0 0 0 0 0 0 0 8 0 1052.5251 Q9ULW0;Q96RR5 Q9ULW0 610 617 TPX2;HCA90 Targeting protein for Xklp2 yes no 2 0.024422 76.1 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 7310800 0 1700200 0 530730 0 5079900 2976 1611 3010 13137;13138;13139 8705;8706 8706 2 HQLEEELRQQK ALKAQTWKHQLEEELR EEELRQQKEAACFKAR K H Q Q K E 0 1 0 0 0 3 3 0 1 0 2 1 0 0 0 0 0 0 0 0 0 11 1 1436.7372 Q9ULW0;Q96RR5 Q9ULW0 610 620 TPX2;HCA90 Targeting protein for Xklp2 yes no 2;3 5.6471E-55 138.25 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 2 2 2 2 1 2 231140000 13201000 55494000 8847300 36258000 7468700 109870000 2977 1611 3011 13140;13141;13142;13143;13144;13145;13146;13147;13148;13149;13150 8707;8708;8709;8710;8711;8712 8707 5 HQLNELGSESAKIK PQELLLGKHQLNELGS GSESAKIKAMGIMDKL K H Q I K A 1 0 1 0 0 1 2 1 1 1 2 2 0 0 0 2 0 0 0 0 0 14 1 1552.8209 Q6KC79-2;Q6KC79 Q6KC79-2 1236 1249 NIPBL Nipped-B-like protein yes no 3 0.0011276 75.968 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 16637000 1060900 3056700 3015200 1684600 3642700 4177200 2978 1222 3012 13151;13152;13153;13154;13155;13156 8713 8713 1 HQNIHTGEKPYECNECGK GQKKYLIKHQNIHTGE YECNECGKAFSQRTSL K H Q G K A 0 0 2 0 2 1 3 2 2 1 0 2 0 0 1 0 1 0 1 0 0 18 1 2199.9426 Q15072 Q15072 174 191 ZNF146 Zinc finger protein OZF yes yes 3;4 0.00065363 81.01 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 2 2 11984000 0 1036300 2419300 3511700 1965000 3051500 2979 1131 3013 13157;13158;13159;13160;13161;13162;13163;13164;13165 8714;8715;8716;8717;8718 8716 5 HQNVQLPR PIRITLSKHQNVQLPR HQNVQLPREGQEDQGL K H Q P R E 0 1 1 0 0 2 0 0 1 0 1 0 0 0 1 0 0 0 0 1 0 8 0 990.53591 P26599;P26599-2;P26599-3;A6NLN1 P26599 411 418 PTBP1 Polypyrimidine tract-binding protein 1 yes no 2 0.024805 75.738 By matching By matching By matching By matching By matching By MS/MS 1 1 32128000 0 0 0 5292000 0 26836000 2980 882 3014 13166;13167 8719 8719 1 HQNVQLPREGQEDQGLTK PIRITLSKHQNVQLPR QEDQGLTKDYGNSPLH K H Q T K D 0 1 1 1 0 4 2 2 1 0 2 1 0 0 1 0 1 0 0 1 0 18 1 2076.0348 P26599;P26599-2;P26599-3;A6NLN1 P26599 411 428 PTBP1 Polypyrimidine tract-binding protein 1 yes no 3;4 2.0967E-271 173.19 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 3 812950000 106630000 119660000 204020000 71493000 110610000 200530000 2981 882 3015 13168;13169;13170;13171;13172;13173;13174;13175;13176;13177;13178;13179;13180;13181 8720;8721;8722;8723;8724;8725;8726;8727;8728;8729;8730;8731;8732 8723 13 HQQIPLHSPPSK IQPHSLIKHQQIPLHS PLHSPPSKVSHHQLIL K H Q S K V 0 0 0 0 0 2 0 0 2 1 1 1 0 0 3 2 0 0 0 0 0 12 0 1367.731 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;C9JAU4 E7EX82 267 278 PHC3 Polyhomeotic-like protein 3 yes no 3 0.0043953 64.121 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 7048500 0 1334300 978940 654570 2018300 2062400 2982 398 3016 13182;13183;13184;13185;13186 8733;8734;8735;8736 8736 4 HQSFVLVGETGSGK RFTDILVRHQSFVLVG VGETGSGKTTQIPQWC R H Q G K T 0 0 0 0 0 1 1 3 1 0 1 1 0 1 0 2 1 0 0 2 0 14 0 1444.731 F5H6K0;O43143 F5H6K0 142 155 DHX15 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 2;3 0.00060167 87.138 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 3 20292000 2031600 2199500 1597700 0 0 14463000 2983 524 3017 13187;13188;13189;13190;13191;13192;13193 8737;8738;8739;8740;8741;8742;8743 8739 7 HQTLELEK KKRCPYTKHQTLELEK HQTLELEKEFLFNMYL K H Q E K E 0 0 0 0 0 1 2 0 1 0 2 1 0 0 0 0 1 0 0 0 0 8 0 996.52401 Q9NYD6;P31260-2;D6RAR5;E7EN04;H0Y2M1;P31269;P28358;P31260 Q9NYD6 278 285 HOXC10;HOXA10;HOXA9;HOXD10 Homeobox protein Hox-C10;Homeobox protein Hox-A10;Homeobox protein Hox-A9;Homeobox protein Hox-D10 yes no 2 0.0061273 95.358 By matching By matching By MS/MS By matching By matching By matching 1 1 1 5504700 462450 1939700 3102600 0 0 0 2984 1562 3018 13194;13195;13196 8744 8744 1 HQVEQLSSSLKQK EQASQGLRHQVEQLSS LSSSLKQKEQQLKEVA R H Q Q K E 0 0 0 0 0 3 1 0 1 0 2 2 0 0 0 3 0 0 0 1 0 13 1 1510.8104 Q14980-2;Q14980;F5H4J1;F5H6Y5 Q14980-2 551 563 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 5.5937E-29 116.9 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 4683600 0 1289600 945670 414400 2033900 0 2985 1121 3019 13197;13198;13199;13200;13201 8745;8746 8745 2 HQVSVEGTNQTDVK SAIIHIKKHQVSVEGT GTNQTDVKAVGGPAKL K H Q V K A 0 0 1 1 0 2 1 1 1 0 0 1 0 0 0 1 2 0 0 3 0 14 0 1540.7481 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7;Q14676-4 Q14676 541 554 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3 0.00092155 84.173 By matching By matching By matching By matching By matching By MS/MS 1 1 759260 146120 0 0 0 0 613140 2986 1109 3020 13202;13203 8747;8748 8747 2 HQVSVEGTNQTDVKAVGGPAK SAIIHIKKHQVSVEGT KAVGGPAKLLVVSLEE K H Q A K L 2 0 1 1 0 2 1 3 1 0 0 2 0 0 1 1 2 0 0 4 0 21 1 2121.0814 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7;Q14676-4 Q14676 541 561 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3 0.00063636 54.964 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 3106300 0 500920 687230 889600 518680 509910 2987 1109 3021 13204;13205;13206;13207;13208 8749;8750 8749 2 HRELIMGEDPAQPR EHKQSYWRHRELIMGE GEDPAQPRKYKKKKKE R H R P R K 1 2 0 1 0 1 2 1 1 1 1 0 1 0 2 0 0 0 0 0 0 14 1 1647.8151 Q12873;E9PG89;Q12873-2 Q12873 683 696 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 3 0.01549 47.217 By matching By matching By matching By matching By matching By MS/MS 1 1650600 0 0 0 0 0 1650600 2988 430 3022 13209 8751 8751 1 HRKEVDYSDSLTEK KMFGRGSRHRKEVDYS YSDSLTEKQWLKAIEE R H R E K Q 0 1 0 2 0 0 2 0 1 0 1 2 0 0 0 2 1 0 1 1 0 14 2 1705.8271 P51532-5;P51532-2;P51532-3;P51532-4;P51532;Q9HBD4;F5H0X5;H0YGM3 P51532-5 1340 1353 SMARCA4 Transcription activator BRG1 yes no 3 0.0080621 67.102 By matching By matching By matching By matching By matching By MS/MS 1 1 1848200 0 0 0 0 580260 1267900 2989 952 3023 13210;13211 8752 8752 0 HRLLSQVVRPQESR SGDDKNEKHRLLSQVV VVRPQESRSLSPSHLT K H R S R S 0 3 0 0 0 2 1 0 1 0 2 0 0 0 1 2 0 0 0 2 0 14 2 1703.9543 Q5T200-2;Q5T200 Q5T200-2 861 874 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 4 0.022721 43.03 By matching By matching By matching By matching By matching By MS/MS 1 1 3628900 0 0 0 0 1537500 2091400 2990 1188 3024 13212;13213 8753 8753 1 HRQMINLAESK VPIVAFNKHRQMINLA MINLAESKASLAAILE K H R S K A 1 1 1 0 0 1 1 0 1 1 1 1 1 0 0 1 0 0 0 0 0 11 1 1325.6874 Q14149 Q14149 153 163 MORC3 MORC family CW-type zinc finger protein 3 yes yes 3 0.014549 81.625 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 2991 1096 3025 13214 8754 8754 1 HRQVGNAVPPPLAK LFGNILDKHRQVGNAV AVPPPLAKAIGLEIKL K H R A K A 2 1 1 0 0 1 0 1 1 0 1 1 0 0 3 0 0 0 0 2 0 14 1 1482.8419 F5GX68 F5GX68 1576 1589 DNMT1 Cytosine-specific methyltransferase no no 3 0.0083349 52.463 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4803400 0 320640 761120 0 1050400 2671300 2992 487 3026 13215;13216;13217;13218 8755 8755 1 HSAEAIALEQSR QCGSEKCKHSAEAIAL AIALEQSRLARLDPHP K H S S R L 3 1 0 0 0 1 2 0 1 1 1 0 0 0 0 2 0 0 0 0 0 12 0 1310.6579 Q96KQ7-2;B0UZY3;Q96KQ7;B0UZY0;A2ABF8;B0UZY1;A2ABF9;H0YIM0;H0YHA9;A2BED6;A2BED7 Q96KQ7-2 1143 1154 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes no 3 0.0033224 70.54 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 5053400 1075700 1813000 664440 0 1500200 0 2993 7 3027 13219;13220;13221;13222;13223 8756;8757;8758 8758 3 HSAELIAMEK SPVSSPRKHSAELIAM AELIAMEKRRLQKLEY K H S E K R 2 0 0 0 0 0 2 0 1 1 1 1 1 0 0 1 0 0 0 0 0 10 0 1127.5645 O60293-2;O60293 O60293-2 957 966 ZFC3H1 Zinc finger C3H1 domain-containing protein yes no 2 0.012231 70.412 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 3456700 0 644120 763520 0 640340 1408700 2994 729 3028 13224;13225;13226;13227 8759;8760 8760 2 HSANCDRLSESSASPQPK QSLRRSTRHSANCDRL SSASPQPKRRQQDTSA R H S P K R 2 1 1 1 1 1 1 0 1 0 1 1 0 0 2 5 0 0 0 0 0 18 1 1969.8912 A6NCU2;B7Z227;A6NHW8;Q8N5Y2-2;Q8N5Y2-3;Q8N5Y2 A6NCU2 188 205 MSL3 Male-specific lethal 3 homolog yes no 4 0.011286 41.367 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 5501000 709380 1069200 886020 727120 0 2109300 2995 15 3029 13228;13229;13230;13231;13232 8761;8762 8762 2 HSEEAEFTPPLK KKKKKKRKHSEEAEFT AEFTPPLKCSPKRKGK K H S L K C 1 0 0 0 0 0 3 0 1 0 1 1 0 1 2 1 1 0 0 0 0 12 0 1383.667 Q3B726 Q3B726 315 326 TWISTNB DNA-directed RNA polymerase I subunit RPA43 yes yes 2 0.018851 74.237 By matching By matching By matching By matching By MS/MS By matching 1 1523900 0 0 0 0 1523900 0 2996 1164 3030 13233 8763 8763 0 HSFNLANHLR PRCGKGFKHSFNLANH FNLANHLRSHTGERPY K H S L R S 1 1 2 0 0 0 0 0 2 0 2 0 0 1 0 1 0 0 0 0 0 10 0 1207.621 Q96SL8 Q96SL8 62 71 FIZ1 Flt3-interacting zinc finger protein 1 yes yes 3 0.011865 68.626 By matching By matching By matching By matching By matching By MS/MS 1 1 1 8151000 0 0 620190 0 1849700 5681100 2997 1419 3031 13234;13235;13236 8764 8764 1 HSGAKPLQCEVCGFQCR HLLVHQMRHSGAKPLQ EVCGFQCRQRASLKYH R H S C R Q 1 1 0 0 3 2 1 2 1 0 1 1 0 1 1 1 0 0 0 1 0 17 1 2032.903 Q8N554-2;Q8N554;A8K186 Q8N554-2 443 459 ZNF276 Zinc finger protein 276 yes no 3 0.011537 42.314 By matching By matching By matching By matching By matching By MS/MS 1 2794800 0 0 0 0 0 2794800 2998 1300 3032 13237 8765 8765 1 HSGNNFKCPHCDFLGDSK LKSHIRIKHSGNNFKC CDFLGDSKATLRKHSR K H S S K A 0 0 2 2 2 0 0 2 2 0 1 2 0 2 1 2 0 0 0 0 0 18 1 2118.9 B3KQX0;Q9NPA5-2;E2QRH5;Q5JWM1;Q9NPA5 B3KQX0 152 169 ZFP64 Zinc finger protein 64 homolog, isoforms 1 and 2;Zinc finger protein 64 homolog, isoforms 3 and 4 yes no 4 0.0017007 66.201 By matching By matching By matching By matching By MS/MS By MS/MS 2 1 2 1 11610000 0 0 1887400 868220 3679200 5174800 2999 72 3033 13238;13239;13240;13241;13242;13243 8766;8767 8766 1 HSGPNSADSANDGFVR TEMDWVLKHSGPNSAD SANDGFVRLRGLPFGC K H S V R L 2 1 2 2 0 0 0 2 1 0 0 0 0 1 1 3 0 0 0 1 0 16 0 1629.7132 P52597;B4DKS8 P52597 99 114 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 2;3 1.6758E-05 87.99 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 2 1 13998000 815250 3181600 2160000 887600 2746700 4207000 3000 958 3034 13244;13245;13246;13247;13248;13249;13250 8768;8769;8770;8771;8772;8773 8772 5 HSLAEILR LHKKTQSKHSLAEILR HSLAEILRSEYSSGME K H S L R S 1 1 0 0 0 0 1 0 1 1 2 0 0 0 0 1 0 0 0 0 0 8 0 937.53451 F8WAJ0;Q9H8H2;Q9H8H2-2 F8WAJ0 652 659 DDX31 Probable ATP-dependent RNA helicase DDX31 yes no 2 0.02216 78.113 By matching By MS/MS By matching By matching By matching By matching 1 1 1 12904000 0 1565500 0 0 3710200 7627900 3001 565 3035 13251;13252;13253 8774 8774 1 HSLECTLILTEGDSAK DANDAGGKHSLECTLI LTEGDSAKSLAVSGLG K H S A K S 1 0 0 1 1 0 2 1 1 1 3 1 0 0 0 2 2 0 0 0 0 16 0 1772.8615 Q02880-2;Q02880;E9PCY5 Q02880-2 467 482 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 2;3 1.5448E-249 177.04 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 2 2 2 2 173260000 20078000 88478000 0 2559100 0 62143000 3002 1035 3036 13254;13255;13256;13257;13258;13259;13260;13261 8775;8776;8777;8778;8779;8780;8781 8779 7 HSLLEHMSLHSGQK CSKALTTKHSLLEHMS MSLHSGQKSFTCDQCG K H S Q K S 0 0 0 0 0 1 1 1 3 0 3 1 1 0 0 3 0 0 0 0 0 14 0 1602.7937 O43167 O43167 363 376 ZBTB24 Zinc finger and BTB domain-containing protein 24 yes yes 4 0.029289 39.961 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2842000 0 0 383080 213380 1047600 1197900 3003 710 3037 13262;13263;13264;13265 8782 8782 1 HSLVGQGQSSGPR SSWADSSRHSLVGQGQ QGQSSGPRTSRPRGSS R H S P R T 0 1 0 0 0 2 0 3 1 0 1 0 0 0 1 3 0 0 0 1 0 13 0 1308.6535 P20930;CON__P20930 P20930 2222 2234 FLG Filaggrin yes no 3 0.025523 44.436 By matching By matching By matching By matching By matching By MS/MS 1 205650 0 0 0 0 0 205650 + 3004 301 3038 13266 8783 8783 1 HSNVNLTIFTAR EVAEFLARHSNVNLTI NLTIFTARLYYFQYPC R H S A R L 1 1 2 0 0 0 0 0 1 1 1 0 0 1 0 1 2 0 0 1 0 12 0 1371.7259 Q9NRW3;Q8IUX4 Q9NRW3 111 122 APOBEC3C;APOBEC3F DNA dC->dU-editing enzyme APOBEC-3C;DNA dC->dU-editing enzyme APOBEC-3F no no 2;3 0 215.77 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 3 1 2 377250000 3591200 253000000 0 3828700 0 116830000 3005 1537 3039 13267;13268;13269;13270;13271;13272;13273 8784;8785;8786;8787;8788;8789 8785 6 HSRNPATRGLPSTASGR RDREERLRHSRNPATR LPSTASGRLRGTQEVA R H S G R L 2 3 1 0 0 0 0 2 1 0 1 0 0 0 2 3 2 0 0 0 0 17 2 1763.9139 P48730-2;B4DIJ9;P48730;Q59FJ7;H7BYT1 P48730-2 317 333 CSNK1D Casein kinase I isoform delta yes no 4 0.015324 40.493 By matching By matching By matching By matching By matching By MS/MS 1 1210500 0 0 0 0 0 1210500 3006 932 3040 13274 8790 8790 1 HSSTPNSSEFSRK KKKRKKEKHSSTPNSS NSSEFSRK________ K H S R K - 0 1 1 0 0 0 1 0 1 0 0 1 0 1 1 5 1 0 0 0 0 13 1 1462.6801 Q8N9Q2 Q8N9Q2 143 155 SREK1IP1 Protein SREK1IP1 yes yes 3 0.0043273 57.267 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 2670400 420370 0 1192500 380300 296440 380810 3007 1311 3041 13275;13276;13277;13278;13279 8791 8791 1 HSVDSVLTALQDSSK VNSRTSEKHSVDSVLT TALQDSSKRKQLVSDG K H S S K R 1 0 0 2 0 1 0 0 1 0 2 1 0 0 0 4 1 0 0 2 0 15 0 1585.7948 Q5T5X7 Q5T5X7 42 56 BEND3 BEN domain-containing protein 3 yes yes 3 0.00021161 86.539 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 41141000 0 32817000 0 8324600 0 0 3008 1192 3042 13280;13281 8792;8793 8793 2 HSVGVVIGR GIDVPVPRHSVGVVIG SVGVVIGRSGEMIKKI R H S G R S 0 1 0 0 0 0 0 2 1 1 0 0 0 0 0 1 0 0 0 3 0 9 0 922.53485 Q92945-2;Q92945;E7EP96 Q92945-2 332 340 KHSRP Far upstream element-binding protein 2 yes no 2 6.2868E-42 141.52 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 2 459370000 53504000 77446000 66176000 25771000 75897000 160580000 3009 1366 3043 13282;13283;13284;13285;13286;13287;13288;13289 8794;8795;8796;8797;8798;8799 8796 6 HSVGVVIGRSGEMIK GIDVPVPRHSVGVVIG GRSGEMIKKIQNDAGV R H S I K K 0 1 0 0 0 0 1 3 1 2 0 1 1 0 0 2 0 0 0 3 0 15 1 1567.8504 Q92945-2;Q92945;E7EP96 Q92945-2 332 346 KHSRP Far upstream element-binding protein 2 yes no 3 1.6944E-05 90.689 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 76234000 14422000 10620000 20376000 16113000 0 14703000 3010 1366 3044 13290;13291;13292;13293;13294 8800;8801;8802;8803;8804;8805;8806;8807 8805 8 HSVGVVIGRSGEMIKK GIDVPVPRHSVGVVIG RSGEMIKKIQNDAGVR R H S K K I 0 1 0 0 0 0 1 3 1 2 0 2 1 0 0 2 0 0 0 3 0 16 2 1695.9454 Q92945-2;Q92945;E7EP96 Q92945-2 332 347 KHSRP Far upstream element-binding protein 2 yes no 4 0.011266 43.914 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 3934200 0 0 1369600 841010 512730 1210900 3011 1366 3045 13295;13296;13297;13298 8808;8809;8810;8811 8809 4 HTANYDTEERVGSSSSESCAQDLPVLVGEEGEVK EQIEESEKHTANYDTE VGEEGEVKKLENTGIE K H T V K K 2 1 1 2 1 1 6 3 1 0 2 1 0 0 1 5 2 0 1 4 0 34 1 3678.6591 Q99590-2;F8VXG7;Q99590;F8W028 Q99590-2 145 178 SCAF11 Protein SCAF11 yes no 4 1.4028E-17 58.565 By matching By matching By matching By MS/MS By matching By matching 1 1 24448000 0 2936300 0 21512000 0 0 3012 547 3046 13299;13300 8812 8812 1 HTASINDLER TAVKDQNKHTASINDL ASINDLERETQPSYDI K H T E R E 1 1 1 1 0 0 1 0 1 1 1 0 0 0 0 1 1 0 0 0 0 10 0 1154.568 P54132;F5H7R6;H0YNU5 P54132 536 545 BLM Bloom syndrome protein yes no 2 0.002987 93.561 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4631400 0 1566500 0 0 723770 2341100 3013 965 3047 13301;13302;13303 8813 8813 1 HTEMITTLK VTMQQAQKHTEMITTL TEMITTLKKIRRFKVS K H T L K K 0 0 0 0 0 0 1 0 1 1 1 1 1 0 0 0 3 0 0 0 0 9 0 1072.5587 O75475 O75475 393 401 PSIP1 PC4 and SFRS1-interacting protein yes yes 2 0.0068334 90.149 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 17394000 540700 0 3511000 1803000 4878000 6661100 3014 741 3048 13304;13305;13306;13307;13308 8814;8815 8814 2 HTEMITTLKK VTMQQAQKHTEMITTL EMITTLKKIRRFKVSQ K H T K K I 0 0 0 0 0 0 1 0 1 1 1 2 1 0 0 0 3 0 0 0 0 10 1 1200.6536 O75475 O75475 393 402 PSIP1 PC4 and SFRS1-interacting protein yes yes 3 0.0014239 98.044 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 6792600 0 2382500 1806100 490290 2113700 0 3015 741 3049 13309;13310;13311;13312;13313 8816;8817;8818;8819 8819 4 HTGAKPFQCGVCNR ELTRHYRKHTGAKPFQ FQCGVCNRSFSRSDHL K H T N R S 1 1 1 0 2 1 0 2 1 0 0 1 0 1 1 0 1 0 0 1 0 14 1 1630.7457 A2TJX0;B4DL96;Q13887 A2TJX0 336 349 KLF5 Krueppel-like factor 5 yes no 3 0.0011271 77.185 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 29182000 2563700 2615400 3666900 3419100 5143200 11774000 3016 9 3050 13314;13315;13316;13317;13318;13319 8820;8821;8822 8820 3 HTGEKPFECPNCHER HFKEHLRKHTGEKPFE ECPNCHERFARNSTLK K H T E R F 0 1 1 0 2 0 3 1 2 0 0 1 0 1 2 0 1 0 0 0 0 15 1 1896.7995 P52739-2;P52739 P52739-2 316 330 ZNF131 Zinc finger protein 131 yes no 4 0.00053069 72.321 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4387700 370200 0 711510 0 1402900 1903100 3017 960 3051 13320;13321;13322;13323 8823 8823 1 HTGEKPYICGICGK SLITHSRKHTGEKPYI YICGICGKSFISSGEL K H T G K S 0 0 0 0 2 0 1 3 1 2 0 2 0 0 1 0 1 0 1 0 0 14 1 1618.7596 Q9NPC7-3;Q9NPC7-2;Q9NPC7 Q9NPC7-3 465 478 MYNN Myoneurin yes no 3 0.031096 41.227 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 5292600 1059100 682880 821140 915920 1813600 0 3018 1524 3052 13324;13325;13326;13327;13328 8824 8824 1 HTGEKPYVCDTCGK TLTYHVRRHTGEKPYV YVCDTCGKAFAVSSSL R H T G K A 0 0 0 1 2 0 1 2 1 0 0 2 0 0 1 0 2 0 1 1 0 14 1 1650.713 Q9NPC7-3;Q9NPC7-2;Q9NPC7 Q9NPC7-3 437 450 MYNN Myoneurin yes no 3 0.0059184 55.335 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 2731000 679980 534380 972650 301280 242730 0 3019 1524 3053 13329;13330;13331;13332;13333 8825 8825 1 HTGPNSPDTANDGFVR VEMDWVLKHTGPNSPD TANDGFVRLRGLPFGC K H T V R L 1 1 2 2 0 0 0 2 1 0 0 0 0 1 2 1 2 0 0 1 0 16 0 1683.7601 D6RBM0;E9PCY7;P31943;G8JLB6;D6RIU0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E7EQJ0;E5RGV0;E5RGH4;H0YAQ2;P55795 D6RBM0 99 114 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H2, N-terminally processed no no 3 1.7764E-18 105.17 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 26600000 1633600 5818100 2917400 2198200 5538600 8494300 3020 322;970 3054 13334;13335;13336;13337;13338;13339;13340 8826;8827;8828;8829;8830;8831 8828 6 HTGPNSPDTANDGFVRLR VEMDWVLKHTGPNSPD NDGFVRLRGLPFGCSK K H T L R G 1 2 2 2 0 0 0 2 1 0 1 0 0 1 2 1 2 0 0 1 0 18 1 1952.9453 D6RBM0;E9PCY7;P31943;G8JLB6;D6RIU0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E5RGV0;E5RGH4;H0YAQ2;P55795 D6RBM0 99 116 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H2, N-terminally processed no no 3;4 5.9034E-45 114.31 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 2 2 2 2 20762000 1697200 6869100 2016400 0 2790100 7389400 3021 322;970 3055 13341;13342;13343;13344;13345;13346;13347;13348;13349;13350 8832;8833;8834;8835;8836;8837 8835 6 HTGTIPGAQGLMNSSLLHQPKARP AVNNVHMKHTGTIPGA LHQPKARP________ K H T R P - 2 1 1 0 0 2 0 3 2 1 3 1 1 0 3 2 2 0 0 0 0 24 2 2510.3176 E9PHP9;O15265 E9PHP9 724 747 ATXN7 Ataxin-7 yes no 4 0.0029267 48.354 By matching By matching By matching By MS/MS By matching By matching 1 1621100 0 0 0 1621100 0 0 3022 439 3056 13351 8838 8838 1 HTLSYVDVGTGK PFEEHWRKHTLSYVDV YVDVGTGKVTLEYRPV K H T G K V 0 0 0 1 0 0 0 2 1 0 1 1 0 0 0 1 2 0 1 2 0 12 0 1275.6459 E9PBJ5;P31040;E9PEF8;D6RFM5 E9PBJ5 577 588 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 2;3 0.0017862 77.644 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 2 2 2 24215000 0 3207000 4225200 3493000 5016800 8273300 3023 407 3057 13352;13353;13354;13355;13356;13357;13358;13359;13360 8839;8840;8841;8842 8839 3 HTPADVQLIGTDSQGNKFK VLISPTLKHTPADVQL DSQGNKFKLLSEHQVT K H T F K L 1 0 1 2 0 2 0 2 1 1 1 2 0 1 1 1 2 0 0 1 0 19 1 2055.0385 P42684-7;P42684-5;P42684-6;P42684;P42684-9;P42684-4;P42684-10;P42684-2;D1MPS6;P42684-3 P42684-7 817 835 ABL2 Abelson tyrosine-protein kinase 2 yes no 3 2.1189E-10 91.401 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 7474400 1523400 947050 1553500 0 599470 2851000 3024 916 3058 13361;13362;13363;13364;13365 8843;8844 8844 2 HTQDSARVNPQDGTNTLTR SSHANAAKHTQDSARV DGTNTLTRIAENGVSE K H T T R I 1 2 2 2 0 2 0 1 1 0 1 0 0 0 1 1 4 0 0 1 0 19 1 2110.0152 Q9H9B1-3;Q9H9B1;Q9H9B1-4;C9JD67;Q9H9B1-2 Q9H9B1-3 72 90 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes no 3;4 5.1964E-06 85.362 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 1 2 1 16381000 3076400 3148800 4004600 901850 2377500 2871400 3025 1507 3059 13366;13367;13368;13369;13370;13371;13372;13373;13374;13375;13376 8845;8846;8847;8848;8849;8850;8851;8852 8848 8 HTTFEQPVFSVSK ARKVNTEKHTTFEQPV QPVFSVSKQSPPISTS K H T S K Q 0 0 0 0 0 1 1 0 1 0 0 1 0 2 1 2 2 0 0 2 0 13 0 1505.7514 P33981-2;P33981 P33981-2 421 433 TTK Dual specificity protein kinase TTK yes no 3 0.0010535 78.287 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 10781000 0 225840 6948100 0 0 3606800 3026 891 3060 13377;13378;13379 8853;8854 8853 2 HTVPCMPPAKQK SPEKAKGRHTVPCMPP CMPPAKQKFLKSTEEQ R H T Q K F 1 0 0 0 1 1 0 0 1 0 0 2 1 0 3 0 1 0 0 1 0 12 1 1392.7006 Q9ULW0;Q96RR5 Q9ULW0 194 205 TPX2;HCA90 Targeting protein for Xklp2 yes no 3 0.017519 53.237 By matching By matching By matching By matching By matching By MS/MS 1 1 1447000 0 0 333430 0 0 1113600 3027 1611 3061 13380;13381 8855 8855 1 HVEYEVSSQRFK EKKGLFLKHVEYEVSS EVSSQRFKSSVYRRYN K H V F K S 0 1 0 0 0 1 2 0 1 0 0 1 0 1 0 2 0 0 1 2 0 12 1 1507.7419 Q9Y5X2;C9JCB9;C9J8E6;C9J014;C9J271 Q9Y5X2 92 103 SNX8 Sorting nexin-8 yes no 3 0.032168 47.039 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2870400 0 0 929740 0 404450 1536200 3028 1657 3062 13382;13383;13384 8856 8856 1 HVFIHTGEKPFQCSQCDMR RTNYHLQRHVFIHTGE QCSQCDMRFIQKYLLQ R H V M R F 0 1 0 1 2 2 1 1 2 1 0 1 1 2 1 1 1 0 0 1 0 19 1 2376.0562 Q9UQR1;F5H173 Q9UQR1 189 207 ZNF148 Zinc finger protein 148 yes no 3;4 0.00042164 73.498 By matching By matching By matching By matching By matching By MS/MS 1 2 4135800 0 0 0 287140 0 3848700 3029 1626 3063 13385;13386;13387 8857;8858 8857 2 HVFSANTMGYK PSEDAVEKHVFSANTM SANTMGYKCVVCGKVC K H V Y K C 1 0 1 0 0 0 0 1 1 0 0 1 1 1 0 1 1 0 1 1 0 11 0 1253.5863 Q9Y4E5-2;E9PH99;Q9Y4E5 Q9Y4E5-2 489 499 ZNF451 Zinc finger protein 451 yes no 2 0.013873 60.301 By matching By matching By matching By matching By matching By MS/MS 1 1 1802900 0 0 0 0 673690 1129200 3030 436 3064 13388;13389 8859 8859 1 HVLCAYCYEK ECGHLKQKHVLCAYCY LCAYCYEKVCKETAEI K H V E K V 1 0 0 0 2 0 1 0 1 0 1 1 0 0 0 0 0 0 2 1 0 10 0 1341.5846 Q9BYC8 Q9BYC8 120 129 MRPL32 39S ribosomal protein L32, mitochondrial yes yes 2 2.9819E-05 110.38 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 6305400 0 1171900 1427800 1099200 181940 2424600 3031 1468 3065 13390;13391;13392;13393;13394;13395 8860;8861;8862;8863;8864 8863 5 HVLLTIK WTAELGIRHVLLTIKC RHVLLTIKCLLIHPNP R H V I K C 0 0 0 0 0 0 0 0 1 1 2 1 0 0 0 0 1 0 0 1 0 7 0 822.53272 Q16763 Q16763 111 117 UBE2S Ubiquitin-conjugating enzyme E2 S yes yes 2 0.029981 106.42 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 3032 1156 3066 13396 8865 8865 1 HVLVHTGEKPFPCLECGK RSPRDLERHVLVHTGE FPCLECGKFFRHECYL R H V G K F 0 0 0 0 2 0 2 2 2 0 2 2 0 1 2 0 1 0 0 2 0 18 1 2107.0343 Q96SL8 Q96SL8 432 449 FIZ1 Flt3-interacting zinc finger protein 1 yes yes 4 0.0017634 62.469 By matching By matching By matching By matching By matching By MS/MS 1 1 4233600 0 0 0 0 1353000 2880600 3033 1419 3067 13397;13398 8866;8867 8867 2 HVLVTLGEK TVMGAEIRHVLVTLGE VLVTLGEKMTEEEVEM R H V E K M 0 0 0 0 0 0 1 1 1 0 2 1 0 0 0 0 1 0 0 2 0 9 0 994.58113 F8W1R7;P60660-2;P60660;G3V1V0;G8JLA2;B7Z6Z4;F8VPF3;G3V1Y7;F8VXL3;H0YI43;F8VZU9;F8W180 F8W1R7 111 119 MYL6 Myosin light polypeptide 6 yes no 2 0.0064563 91.867 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1792000 0 935840 0 0 0 856180 3034 552 3068 13399;13400 8868;8869 8869 2 HVPGGGNVQIQNK CGSKDNIKHVPGGGNV GNVQIQNKKVDISKVS K H V N K K 0 0 2 0 0 2 0 3 1 1 0 1 0 0 1 0 0 0 0 2 0 13 0 1346.7055 E7EVA0;P27816-6;P27816;P27816-2;P27816-4;E9PGM5;H0Y2V1;B4DSQ1;F8W9U4 E7EVA0 2161 2173 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.0018601 67.385 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 1 1 3212600 0 799800 453900 0 839820 1119100 3035 388 3069 13401;13402;13403;13404;13405 8870;8871 8870 2 HVPGGGNVQIQNKK CGSKDNIKHVPGGGNV NVQIQNKKVDISKVSS K H V K K V 0 0 2 0 0 2 0 3 1 1 0 2 0 0 1 0 0 0 0 2 0 14 1 1474.8005 E7EVA0;P27816-6;P27816;P27816-2;P27816-4;E9PGM5;H0Y2V1;B4DSQ1;F8W9U4 E7EVA0 2161 2174 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.00035686 86.772 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 7739300 0 1798300 2180800 612230 1246200 1901700 3036 388 3070 13406;13407;13408;13409;13410 8872;8873;8874;8875;8876;8877;8878 8874 7 HVPLSGSQIVKGK APECFNGRHVPLSGSQ GSQIVKGKLAGKRHRY R H V G K L 0 0 0 0 0 1 0 2 1 1 1 2 0 0 1 2 0 0 0 2 0 13 1 1348.7827 O15446;O15446-2 O15446 60 72 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes no 3 2.7694E-05 96.82 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 4486600 691700 713280 0 700040 1289700 1091800 3037 706 3071 13411;13412;13413;13414;13415 8879;8880;8881 8880 3 HVQGWPADHAEK HFSENLIKHVQGWPAD WPADHAEKQASRLREE K H V E K Q 2 0 0 1 0 1 1 1 2 0 0 1 0 0 1 0 0 1 0 1 0 12 0 1373.6476 Q9BTA9-2;Q9BTA9;Q9BTA9-5 Q9BTA9-2 525 536 WAC WW domain-containing adapter protein with coiled-coil yes no 3 0.00335 66.326 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3045300 0 720380 582640 0 332180 1410100 3038 1446 3072 13416;13417;13418;13419 8882 8882 1 HVSNAPLTKLPIK FQEEVFGKHVSNAPLT PLTKLPIKCFLDFKAG K H V I K C 1 0 1 0 0 0 0 0 1 1 2 2 0 0 2 1 1 0 0 1 0 13 1 1416.8453 Q8TAQ2-2;F8VTJ5;Q8TAQ2;F8VXC8;F8VZW6 Q8TAQ2-2 67 79 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 3 3.8203E-05 95.183 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 4896100 0 1459600 1134500 0 520240 1781800 3039 539 3073 13420;13421;13422;13423 8883;8884;8885 8885 3 HVTNPAFTKLPAK FQEDAFGKHVTNPAFT AFTKLPAKCFMDFKAG K H V A K C 2 0 1 0 0 0 0 0 1 0 1 2 0 1 2 0 2 0 0 1 0 13 1 1422.7983 Q92922;F8WE13 Q92922 95 107 SMARCC1 SWI/SNF complex subunit SMARCC1 yes no 3 0.012932 53.038 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 10735000 1638100 2040100 1216800 961660 865200 4013600 3040 1365 3074 13424;13425;13426;13427;13428;13429 8886;8887;8888;8889 8886 4 HVVFGFVK KAEHLDFKHVVFGFVK HVVFGFVKDGMDTVKK K H V V K D 0 0 0 0 0 0 0 1 1 0 0 1 0 2 0 0 0 0 0 3 0 8 0 931.52797 P49792;E9PGT0 P49792 3186 3193 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 2 0.00708 94.407 By matching By matching By matching By matching By matching By MS/MS 1 1154800 0 0 0 0 0 1154800 3041 945 3075 13430 8890 8890 1 HWELTAEGEEIAR EAELRSTKHWELTAEG AEGEEIAREGSHEARV K H W A R E 2 1 0 0 0 0 4 1 1 1 1 0 0 0 0 0 1 1 0 0 0 13 0 1539.7318 B4E363;Q9Y285 B4E363 60 72 FARSA Phenylalanine--tRNA ligase alpha subunit yes no 3 1.8775E-15 109 By matching By MS/MS By matching By matching By matching By matching 1 1067400 0 1067400 0 0 0 0 3042 165 3076 13431 8891 8891 1 HWNHPDSEELPGPPVVKPQSVTVR TKAVYNARHWNHPDSE KPQSVTVRLSSKEPNQ R H W V R L 0 1 1 1 0 1 2 1 2 0 1 1 0 0 5 2 1 1 0 4 0 24 1 2704.3721 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 559 582 WAPAL Wings apart-like protein homolog yes no 4 5.6188E-09 66.732 By matching By matching By matching By matching By matching By MS/MS 1 4972200 0 0 0 0 0 4972200 3043 1253 3077 13432 8892 8892 1 HWPFMVVNDAGRPK AVVQSDMKHWPFMVVN VNDAGRPKVQVEYKGE K H W P K V 1 1 1 1 0 0 0 1 1 0 0 1 1 1 2 0 0 1 0 2 0 14 1 1652.8246 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 P11142 89 102 HSPA8 Heat shock cognate 71 kDa protein yes no 3 6.5026E-20 108.32 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 20219000 0 412250 14696000 432270 3418500 1260000 3044 824 3078;3079 13433;13434;13435;13436;13437 8893;8894;8895 8893 81 2 HYEVEILDAKTR ________________ EILDAKTREKLCFLDK K H Y T R E 1 1 0 1 0 0 2 0 1 1 1 1 0 0 0 0 1 0 1 1 0 12 1 1472.7623 Q9NZ01;Q9NZ01-2 Q9NZ01 3 14 TECR Very-long-chain enoyl-CoA reductase yes no 3 4.1719E-10 107.09 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 4479900 0 657360 768900 0 1415700 1637900 3045 1565 3080 13438;13439;13440;13441 8896;8897;8898;8899 8896 4 HYEVEILDAKTREK ________________ LDAKTREKLCFLDKVE K H Y E K L 1 1 0 1 0 0 3 0 1 1 1 2 0 0 0 0 1 0 1 1 0 14 2 1729.8999 Q9NZ01;Q9NZ01-2 Q9NZ01 3 16 TECR Very-long-chain enoyl-CoA reductase yes no 4 0.0016143 67.118 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 3610200 1107500 0 1155300 1001500 345870 0 3046 1565 3081 13442;13443;13444;13445 8900;8901;8902 8900 3 HYGQFTCEGCK CGDKSSGKHYGQFTCE QFTCEGCKSFFKRSVR K H Y C K S 0 0 0 0 2 1 1 2 1 0 0 1 0 1 0 0 1 0 1 0 0 11 0 1385.5493 P24468;P10589 P10589 90 100 NR2F2;NR2F1 COUP transcription factor 2;COUP transcription factor 1 no no 2;3 0.0039553 75.416 By matching By MS/MS By MS/MS By MS/MS By matching By matching 2 2 2 2 2 16076000 1657500 4145100 5271200 2013700 2988000 0 3047 871;819 3082 13446;13447;13448;13449;13450;13451;13452;13453;13454;13455 8903;8904;8905;8906 8906 4 HYGVFTCEGCK CGDKSSGKHYGVFTCE VFTCEGCKSFFKRSIR K H Y C K S 0 0 0 0 2 0 1 2 1 0 0 1 0 1 0 0 1 0 1 1 0 11 0 1356.5591 B4DQE4;P10588 B4DQE4 40 50 NR2F6 Nuclear receptor subfamily 2 group F member 6 yes no 2;3 0.00064815 94.309 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 3495600 0 730270 0 0 0 2765400 3048 116 3083 13456;13457;13458 8907;8908;8909 8907 3 HYGVYSCEGCK CGDRSSGKHYGVYSCE VYSCEGCKGFFKRTIR K H Y C K G 0 0 0 0 2 0 1 2 1 0 0 1 0 0 0 1 0 0 2 1 0 11 0 1358.5384 F8VZR5;F8VNP5;P28702;Q5STQ1;E9PK95;B7Z3E4;B3KY83;P19793;P48443 F8VZR5 77 87 RXRB;RXRA;RXRG Retinoic acid receptor RXR-beta;Retinoic acid receptor RXR-alpha;Retinoic acid receptor RXR-gamma yes no 2;3 5.9785E-20 119.22 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 2 1 2 2 8619100 757660 1268300 1400500 401780 1414600 3376200 3049 533 3084 13459;13460;13461;13462;13463;13464;13465;13466;13467;13468 8910;8911;8912;8913;8914;8915;8916 8913 7 HYGVYSCEGCKGFFK CGDRSSGKHYGVYSCE EGCKGFFKRTIRKDLT K H Y F K R 0 0 0 0 2 0 1 3 1 0 0 2 0 2 0 1 0 0 2 1 0 15 1 1837.7916 F8VZR5;F8VNP5;P28702;Q5STQ1;E9PK95;B7Z3E4;B3KY83;P19793;P48443 F8VZR5 77 91 RXRB;RXRA;RXRG Retinoic acid receptor RXR-beta;Retinoic acid receptor RXR-alpha;Retinoic acid receptor RXR-gamma yes no 3 7.0635E-56 127.78 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 1 1 61411000 8414500 4084500 16327000 7629800 13134000 11822000 3050 533 3085 13469;13470;13471;13472;13473;13474;13475 8917;8918;8919;8920;8921;8922;8923 8923 7 HYNEEGSQVYNDAHILEK KLMFRNARHYNEEGSQ NDAHILEKLLKEKRKE R H Y E K L 1 0 2 1 0 1 3 1 2 1 1 1 0 0 0 1 0 0 2 1 0 18 0 2144.9763 Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;Q86U86-8;Q86U86;E7EVG2;H0Y5B5;Q86U86-6 Q86U86-5 599 616 PBRM1 Protein polybromo-1 yes no 3 0.00064159 77.191 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 11449000 1877000 1420500 2136100 0 1752500 4263300 3051 1260 3086 13476;13477;13478;13479;13480 8924;8925;8926 8925 3 HYPVFENPK AMESTESRHYPVFENP YPVFENPKQGKLRTKV R H Y P K Q 0 0 1 0 0 0 1 0 1 0 0 1 0 1 2 0 0 0 1 1 0 9 0 1129.5556 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 988 996 ADAR Double-stranded RNA-specific adenosine deaminase no no 2 0.0090399 99.013 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 39509000 2761600 5512000 3057000 2623300 9801100 15754000 3052 352;968 3087 13481;13482;13483;13484;13485;13486 8927;8928 8928 2 HYSSSRSGGGGGGGGCGGGGGVSSLR SVRYSSSKHYSSSRSG GGGVSSLRISSSKGSL K H Y L R I 0 2 0 0 1 0 0 13 1 0 1 0 0 0 0 6 0 0 1 1 0 26 1 2265.9894 P13645;CON__P13645 P13645 10 35 KRT10 Keratin, type I cytoskeletal 10 yes no 4 0.0015442 49.765 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 5645300 1267200 650450 1803300 1104300 0 820090 + 3053 298 3088 13487;13488;13489;13490;13491 8929;8930 8930 2 HYSSSRSGGGGGGGGCGGGGGVSSLRISSSK SVRYSSSKHYSSSRSG SLRISSSKGSLGGGFS K H Y S K G 0 2 0 0 1 0 0 13 1 1 1 1 0 0 0 9 0 0 1 1 0 31 2 2768.2645 P13645;CON__P13645 P13645 10 40 KRT10 Keratin, type I cytoskeletal 10 yes no 5 0.035268 32.775 By matching By matching By matching By MS/MS By matching By matching 1 1 3094900 0 0 1652800 1442100 0 0 + 3054 298 3089 13492;13493 8931 8931 1 HYYEVSCHDQGLCR TKGLMKGKHYYEVSCH CHDQGLCRVGWSTMQA K H Y C R V 0 1 0 1 2 1 1 1 2 0 1 0 0 0 0 1 0 0 2 1 0 14 0 1822.7515 Q92499;B4DME8;B4DPN6 Q92499 133 146 DDX1 ATP-dependent RNA helicase DDX1 yes no 3 0.0064295 52.821 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 8019400 718300 975080 1214400 618310 1281600 3211700 3055 1348 3090 13494;13495;13496;13497;13498;13499 8932 8932 1 IAAEIAQAEEQAR KVEVDMEKIAAEIAQA AQAEEQARKRQEEREK K I A A R K 5 1 0 0 0 2 3 0 0 2 0 0 0 0 0 0 0 0 0 0 0 13 0 1398.7103 C0IMW5;B4DFR4;Q969G3-2;B4DGM3;Q969G3;H7C048;H7BXG8;H7C3F6 C0IMW5 250 262 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes no 2 0.0051068 61.167 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 6957100 0 1552800 800270 0 1426700 3177300 3056 85 3091 13500;13501;13502;13503 8933;8934;8935;8936 8934 4 IAAKTKDHTLVQTIAR KFIDPFCKIAAKTKDH TLVQTIARGVFEAIVD K I A A R G 3 1 0 1 0 1 0 0 1 2 1 2 0 0 0 0 3 0 0 1 0 16 2 1765.021 Q14684-2;Q14684 Q14684-2 181 196 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 3;4 4.1861E-26 108.06 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 44497000 7418700 7987700 8128800 2262400 9375100 9323800 3057 1111 3092 13504;13505;13506;13507;13508;13509;13510;13511;13512;13513 8937;8938;8939;8940;8941;8942;8943;8944 8937 8 IACHEEPVMDLDFDSQK SEQKVCSRIACHEEPV DLDFDSQKARGISGSA R I A Q K A 1 0 0 3 1 1 2 0 1 1 1 1 1 1 1 1 0 0 0 1 0 17 0 2032.887 Q9BYB4 Q9BYB4 204 220 GNB1L Guanine nucleotide-binding protein subunit beta-like protein 1 yes yes 3 0.0032112 49.535 By matching By matching By matching By matching By MS/MS By matching 1 3768400 0 0 0 0 3768400 0 3058 1467 3093 13514 8945 8945 1 IACHEEPVMDLDFDSQKAR SEQKVCSRIACHEEPV DFDSQKARGISGSAGK R I A A R G 2 1 0 3 1 1 2 0 1 1 1 1 1 1 1 1 0 0 0 1 0 19 1 2260.0253 Q9BYB4 Q9BYB4 204 222 GNB1L Guanine nucleotide-binding protein subunit beta-like protein 1 yes yes 3;4 2.222E-26 103.87 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 39148000 0 16574000 0 0 1454700 21119000 3059 1467 3094 13515;13516;13517 8946;8947;8948 8947 2 IACKSPPPESMDTPTSTR TTDDKTTKIACKSPPP MDTPTSTRRRPKTPLG K I A T R R 1 1 0 1 1 0 1 0 0 1 0 1 1 0 4 3 3 0 0 0 0 18 1 1973.9187 P46013;F5H4V4;P46013-2 P46013 2101 2118 MKI67 Antigen KI-67 no no 3 4.9114E-06 88.781 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 13415000 0 2510500 2300400 356640 1724700 6523200 3060 919;920 3095 13518;13519;13520;13521;13522;13523 8949;8950;8951;8952;8953 8953 5 IACKSPPPESVDTPTSTK MTDEKTTKIACKSPPP VDTPTSTKQWPKRSLR K I A T K Q 1 0 0 1 1 0 1 0 0 1 0 2 0 0 4 3 3 0 0 1 0 18 1 1913.9404 P46013;F5H4V4;P46013-2 P46013 1127 1144 MKI67 Antigen KI-67 no no 3 0 233.84 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 116850000 18855000 25431000 17035000 11424000 22348000 21755000 3061 919;920 3096 13524;13525;13526;13527;13528;13529 8954;8955;8956;8957;8958;8959;8960;8961;8962;8963 8963 10 IACKSPPPESVDTPTSTKQWPK MTDEKTTKIACKSPPP TSTKQWPKRSLRKADV K I A P K R 1 0 0 1 1 1 1 0 0 1 0 3 0 0 5 3 3 1 0 1 0 22 2 2453.2261 P46013;F5H4V4;P46013-2 P46013 1127 1148 MKI67 Antigen KI-67 no no 4 0.00023952 57.41 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 6787800 3166400 0 2558900 1062600 0 0 3062 919;920 3097 13530;13531;13532 8964;8965;8966;8967 8965 4 IACKSPQPDPVDTPASTK TTDEKTTKIACKSPQP VDTPASTKQRPKRNLR K I A T K Q 2 0 0 2 1 1 0 0 0 1 0 2 0 0 4 2 2 0 0 1 0 18 1 1910.9408 P46013;F5H4V4;P46013-2 P46013 2340 2357 MKI67 Antigen KI-67 no no 3 1.3418E-32 111.22 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 30932000 0 5131300 3391200 2219900 5011600 15178000 3063 919;920 3098 13533;13534;13535;13536;13537 8968;8969;8970 8970 3 IACRSPQPDPVGTPTIFKPQSK TTHEKTTKIACRSPQP TIFKPQSKRSLRKADV K I A S K R 1 1 0 1 1 2 0 1 0 2 0 2 0 1 5 2 2 0 0 1 0 22 2 2423.2631 P46013;F5H4V4;P46013-2 P46013 2219 2240 MKI67 Antigen KI-67 no no 3;4 2.001E-46 111.57 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 2 2 707320000 258090000 48386000 164450000 45681000 144740000 45972000 3064 919;920 3099 13538;13539;13540;13541;13542;13543;13544;13545;13546;13547;13548;13549;13550 8971;8972;8973;8974;8975;8976;8977;8978;8979;8980;8981;8982;8983;8984 8983 13 IACRSQPDPVDTPTSSKPQSK TTHEKTTKIACRSQPD TSSKPQSKRSLRKVDV K I A S K R 1 1 0 2 1 2 0 0 0 1 0 2 0 0 4 4 2 0 0 1 0 21 2 2298.1274 P46013;F5H4V4;P46013-2 P46013 1492 1512 MKI67 Antigen KI-67 no no 3;4 1.6825E-09 86.258 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 4 1 4 3 2 2 159970000 43636000 5480900 52931000 26643000 16975000 14303000 3065 919;920 3100 13551;13552;13553;13554;13555;13556;13557;13558;13559;13560;13561;13562;13563;13564;13565;13566 8985;8986;8987;8988;8989;8990;8991;8992;8993;8994;8995;8996 8988 12 IADAIENKTTVYK LLHSPMTKIADAIENK ENKTTVYKIGDLTGYC K I A Y K I 2 0 1 1 0 0 1 0 0 2 0 2 0 0 0 0 2 0 1 1 0 13 1 1464.7824 Q9NVN8 Q9NVN8 470 482 GNL3L Guanine nucleotide-binding protein-like 3-like protein yes yes 3 7.1475E-16 111.79 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 9599600 1209700 1668600 2540500 750420 1267900 2162300 3066 1549 3101 13567;13568;13569;13570;13571;13572 8997;8998;8999 8999 3 IADFGWSVHAPSSR LGSAGELKIADFGWSV SVHAPSSRRTTLCGTL K I A S R R 2 1 0 1 0 0 0 1 1 1 0 0 0 1 1 3 0 1 0 1 0 14 0 1528.7423 O14965;A3KFJ0 O14965 272 285 AURKA Aurora kinase A yes no 3 6.9711E-05 90.412 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 18284000 0 0 0 0 0 18284000 3067 698 3102 13573;13574 9000;9001 9001 2 IADFGWSVHAPSSRR LGSAGELKIADFGWSV VHAPSSRRTTLCGTLD K I A R R T 2 2 0 1 0 0 0 1 1 1 0 0 0 1 1 3 0 1 0 1 0 15 1 1684.8434 O14965;A3KFJ0 O14965 272 286 AURKA Aurora kinase A yes no 3;4 0.0029782 52.071 By matching By matching By matching By matching By matching By MS/MS 2 8366400 0 0 0 0 0 8366400 3068 698 3103 13575;13576 9002;9003 9003 2 IAEEEAKAKEEEGVPDEEGWVK FMEAYDQKIAEEEAKA PDEEGWVKVTRRGRRP K I A V K V 3 0 0 1 0 0 8 2 0 1 0 3 0 0 1 0 0 1 0 2 0 22 2 2471.1704 Q9Y3A4;Q9NSQ0 Q9Y3A4 184 205 RRP7A;RRP7B Ribosomal RNA-processing protein 7 homolog A;Putative ribosomal RNA-processing protein 7 homolog B yes no 4 0.018771 34.843 By matching By matching By matching By matching By MS/MS By matching 1 1 1 5827400 0 0 2627100 1813800 1386600 0 3069 1643 3104 13577;13578;13579 9004 9004 1 IAEFTTNLTEEEEK EKKLLEDRIAEFTTNL NLTEEEEKSKSLAKLK R I A E K S 1 0 1 0 0 0 5 0 0 1 1 1 0 1 0 0 3 0 0 0 0 14 0 1652.7781 P35579 P35579 1001 1014 MYH9 Myosin-9 yes yes 2 0.0045757 57.414 By matching By MS/MS By matching By matching By matching By matching 1 1919500 0 1919500 0 0 0 0 3070 900 3105 13580 9005 9005 1 IAEIFMR GGSGIGFRIAEIFMRH RIAEIFMRHGCHTAAR R I A M R H 1 1 0 0 0 0 1 0 0 2 0 0 1 1 0 0 0 0 0 0 0 7 0 878.46841 Q4VXZ8;Q9NUI1;G8JLH8;G3V0I9;Q9NUI1-2 Q4VXZ8 44 50 DECR2 Peroxisomal 2,4-dienoyl-CoA reductase yes no 2 0.010406 110.61 By MS/MS By matching By matching By matching By matching By matching 1 3584600 3584600 0 0 0 0 0 3071 1172 3106 13581 9006 9006 1 IAELDTEAK NFWQKWAKIAELDTEA AELDTEAKNEKESLVI K I A A K N 2 0 0 1 0 0 2 0 0 1 1 1 0 0 0 0 1 0 0 0 0 9 0 988.50769 Q8TD26 Q8TD26 1029 1037 CHD6 Chromodomain-helicase-DNA-binding protein 6 yes yes 2 0.028575 65.157 By matching By matching By matching By matching By matching By MS/MS 1 1 1396300 0 409260 0 0 0 987040 3072 1335 3107 13582;13583 9007 9007 1 IAELLCKNDVTDGRAK TQKDLVLKIAELLCKN DVTDGRAKYWLERAAK K I A A K Y 2 1 1 2 1 0 1 1 0 1 2 2 0 0 0 0 1 0 0 1 0 16 2 1801.9356 P49792;E9PGT0;P0DJD0;P0DJD1;F8VYC4;Q99666;O14715;Q99666-2;F8W705;C9J1W9;C9JF75;C9J6W1;Q7Z3J3-2;Q7Z3J3 P49792 100 115 RANBP2;RGPD1;RGPD2;RGPD5;RGPD8;RGPD6;RGPD4 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RanBP2-like and GRIP domain-containing protein 4 no no 3 0.0060469 59.68 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 4644100 0 697190 1300600 873260 483750 1289300 3073 945;1251 3108 13584;13585;13586;13587;13588 9008;9009;9010 9008 3 IAENGVSERDSEAAK DGTNTLTRIAENGVSE ERDSEAAKQNHVTADD R I A A K Q 3 1 1 1 0 0 3 1 0 1 0 1 0 0 0 2 0 0 0 1 0 15 1 1574.7536 Q9H9B1-3;Q9H9B1;Q9H9B1-4;C9JD67;Q9H9B1-2 Q9H9B1-3 91 105 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes no 3 0.0026932 63.181 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 7530500 0 1781400 1103700 435900 1025500 3184000 3074 1507 3109 13589;13590;13591;13592;13593 9011;9012 9012 2 IAEQVASFQEEK LPQEQKAKIAEQVASF VASFQEEKSKLDAEVS K I A E K S 2 0 0 0 0 2 3 0 0 1 0 1 0 1 0 1 0 0 0 1 0 12 0 1377.6776 G3XAM7;B4E2G8;P35221;F6XBD8;P35221-2;Q8N1C0;F8W845 G3XAM7 684 695 CTNNA1 Catenin alpha-1 yes no 2 6.5082E-27 123.26 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 10745000 1267400 3119400 2059600 0 290820 4007400 3075 161 3110 13594;13595;13596;13597;13598 9013;9014;9015 9013 3 IAETDFEK NAVMEYEKIAETDFEK IAETDFEKRDFRKVVF K I A E K R 1 0 0 1 0 0 2 0 0 1 0 1 0 1 0 0 1 0 0 0 0 8 0 951.45493 Q99615;Q7Z784 Q99615 148 155 DNAJC7 DnaJ homolog subfamily C member 7 yes no 2 0.026998 73.665 By MS/MS By matching By matching By matching By matching By matching 1 1059700 1059700 0 0 0 0 0 3076 1430 3111 13599 9016 9016 1 IAGEASRLAHYNK FVNDIFERIAGEASRL SRLAHYNKRSTITSRE R I A N K R 3 1 1 0 0 0 1 1 1 1 1 1 0 0 0 1 0 0 1 0 0 13 1 1428.7474 Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q5QNW6-2;B4DR52 Q99879 74 86 HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;HIST1H2BK Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B no no 3 0.011696 54.023 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 7448400 1186600 1850000 2247400 1253600 0 910720 3077 119 3112 13600;13601;13602;13603;13604 9017;9018 9017 2 IAGLYNDSEPPRK EERRIAAKIAGLYNDS NDSEPPRKTMRRGVLM K I A R K T 1 1 1 1 0 0 1 1 0 1 1 1 0 0 2 1 0 0 1 0 0 13 1 1458.7467 Q96ES7 Q96ES7 100 112 CCDC101 SAGA-associated factor 29 homolog yes yes 3 0.0013032 64.945 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1417100 421560 0 0 0 531910 463650 3078 1383 3113 13605;13606;13607 9019 9019 1 IAGRAVLIAGQPGTGK LEMIREGKIAGRAVLI AGQPGTGKTAIAMGMA K I A G K T 3 1 0 0 0 1 0 4 0 2 1 1 0 0 1 0 1 0 0 1 0 16 1 1507.8835 Q9Y230;B3KQ59 Q9Y230 68 83 RUVBL2 RuvB-like 2 yes no 3 0.00044348 69.878 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 18405000 4472500 0 3005100 2126400 4049800 4751200 3079 1627 3114 13608;13609;13610;13611;13612 9020;9021 9021 1 IAHIMGPPDRCEHAAR DDGTGPEKIAHIMGPP DRCEHAARIINDLLQS K I A A R I 3 2 0 1 1 0 1 1 2 2 0 0 1 0 2 0 0 0 0 0 0 16 1 1829.8777 Q92945-2;Q92945;E7EP96 Q92945-2 369 384 KHSRP Far upstream element-binding protein 2 yes no 3;4 0.0034344 82.202 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 3 2 4 3 174750000 9530400 23441000 22768000 17268000 90748000 10992000 3080 1366 3115;3116 13613;13614;13615;13616;13617;13618;13619;13620;13621;13622;13623;13624;13625;13626;13627;13628;13629 9022;9023;9024;9025;9026;9027;9028;9029 9024 157 8 IALEDVPEKQK DGTQNKRKIALEDVPE EDVPEKQKNLEEGHSS K I A Q K N 1 0 0 1 0 1 2 0 0 1 1 2 0 0 1 0 0 0 0 1 0 11 1 1268.6976 O43148;O43148-2 O43148 129 139 RNMT mRNA cap guanine-N7 methyltransferase yes no 2;3 0.0039795 91.313 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 3 4 2 2 2 78067000 13974000 9559900 10920000 6452100 10501000 26660000 3081 709 3117 13630;13631;13632;13633;13634;13635;13636;13637;13638;13639;13640;13641;13642;13643;13644;13645;13646;13647 9030;9031;9032;9033;9034;9035;9036;9037;9038;9039 9039 10 IAMENDDGRTEEEK SSPQYRLRIAMENDDG DGRTEEEKHSAVQRQG R I A E K H 1 1 1 2 0 0 4 1 0 1 0 1 1 0 0 0 1 0 0 0 0 14 1 1635.7046 Q8WWM7-6;Q8WWM7-5;Q8WWM7-4;A8K1R6;Q8WWM7-2;Q63ZY4;H3BUF6;Q8WWM7;Q8WWM7-3;H3BSK9;Q8WWM7-7;C9JXV8 Q8WWM7-6 313 326 ATXN2L Ataxin-2-like protein yes no 3 4.1763E-31 118.87 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 5446900 694310 608730 956680 912760 1022400 1252000 3082 36 3118 13648;13649;13650;13651;13652;13653 9040;9041;9042;9043 9041 4 IANPVEGSSGR QMSGAQIKIANPVEGS PVEGSSGRQVTITGSA K I A G R Q 1 1 1 0 0 0 1 2 0 1 0 0 0 0 1 2 0 0 0 1 0 11 0 1085.5465 Q15365 Q15365 315 325 PCBP1 Poly(rC)-binding protein 1 yes yes 2 0.0039439 79.659 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 1 1 1 55153000 4345400 9237700 5539300 1503900 11204000 23323000 3083 1135 3119 13654;13655;13656;13657;13658;13659;13660 9044;9045;9046;9047;9048;9049 9048 6 IANPVEGSTDR QMSGAQIKIANPVEGS PVEGSTDRQVTITGSA K I A D R Q 1 1 1 1 0 0 1 1 0 1 0 0 0 0 1 1 1 0 0 1 0 11 0 1157.5677 F8VZX2;Q15366-4;Q15366-5;Q15366-3;Q15366;Q15366-2;H3BRU6;G3V0E8;B4DXP5;B4DRD7;F8VRG9;F8VWQ4;F8VRH0;H3BSS4 F8VZX2 279 289 PCBP2 Poly(rC)-binding protein 2 yes no 2 0.023367 53.567 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 3857200 0 1277100 791560 454530 1334000 0 3084 548 3120 13661;13662;13663;13664 9050;9051 9050 2 IANVVINQSANDSK EPEEKRRKIANVVINQ NQSANDSKVLIDNIPD K I A S K V 2 0 3 1 0 1 0 0 0 2 0 1 0 0 0 2 0 0 0 2 0 14 0 1471.7631 O14981 O14981 249 262 BTAF1 TATA-binding protein-associated factor 172 yes yes 2 0.011347 49.988 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 4368800 388600 0 896920 790970 962970 1329300 3085 700 3121 13665;13666;13667;13668;13669 9052 9052 1 IAPQYYDMSNFPQCEAK IKPEWLVKIAPQYYDM NFPQCEAKRQLDRIIA K I A A K R 2 0 1 1 1 2 1 0 0 1 0 1 1 1 2 1 0 0 2 0 0 17 0 2060.8972 F5H6K0;O43143 F5H6K0 750 766 DHX15 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 2 0.0019136 75.548 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 19266000 0 13743000 0 0 0 5522900 3086 524 3122 13670;13671 9053;9054 9054 2 IAPYSVEIK FLEKMGQKIAPYSVEI APYSVEIKNTCTSVYT K I A I K N 1 0 0 0 0 0 1 0 0 2 0 1 0 0 1 1 0 0 1 1 0 9 0 1018.5699 P78527;E7EUY0;P78527-2;F5GX40 P78527 100 108 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.0066274 91.087 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 51248000 0 6746200 6234000 3082800 1288900 33896000 3087 1012 3123 13672;13673;13674;13675;13676 9055;9056;9057 9056 3 IAPYSVEIKNTCTSVYTK FLEKMGQKIAPYSVEI TCTSVYTKDRAAKCKI K I A T K D 1 0 1 0 1 0 1 0 0 2 0 2 0 0 1 2 3 0 2 2 0 18 1 2073.0452 P78527;E7EUY0;P78527-2;F5GX40 P78527 100 117 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 0.0086468 43.37 By matching By matching By matching By MS/MS By matching By matching 1 1 19251000 0 16560000 0 2691200 0 0 3088 1012 3124 13677;13678 9058 9058 1 IAQDKLNDIKEK NKKNTSNKIAQDKLND KLNDIKEKVKNIHGYM K I A E K V 1 0 1 2 0 1 1 0 0 2 1 3 0 0 0 0 0 0 0 0 0 12 2 1413.7827 Q92878-2;Q92878;Q92878-3 Q92878-2 945 956 RAD50 DNA repair protein RAD50 yes no 3 0.0037158 91.961 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 11061000 0 2261400 1673900 1304000 2841500 2980200 3089 1362 3125 13679;13680;13681;13682;13683 9059;9060;9061;9062;9063 9060 4 IAQLASITGPQSR AKGGEVVKIAQLASIT SITGPQSRVAQPETPV K I A S R V 2 1 0 0 0 2 0 1 0 2 1 0 0 0 1 2 1 0 0 0 0 13 0 1340.7412 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A7E2D7 Q96L91-4 1489 1501 EP400 E1A-binding protein p400 yes no 2 0.0019495 72.815 By matching By matching By matching By matching By matching By MS/MS 1 1 1 7928900 0 1291100 4063000 0 0 2574800 3090 1405 3126 13684;13685;13686 9064 9064 1 IASNAGSIA ECADLWPRIASNAGSI ASNAGSIA________ R I A I A - 3 0 1 0 0 0 0 1 0 2 0 0 0 0 0 2 0 0 0 0 0 9 0 802.41848 P62829 P62829 132 140 RPL23 60S ribosomal protein L23 yes yes 1 0.0056169 65.252 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 4075800 0 842220 1175500 554600 0 1503500 3091 995 3127 13687;13688;13689;13690 9065;9066 9066 2 IASSVTAGVASSLSEK GSSTPNPKIASSVTAG VASSLSEKIADSIGNN K I A E K I 3 0 0 0 0 0 1 1 0 1 1 1 0 0 0 5 1 0 0 2 0 16 0 1505.7937 Q8NHV4-2;Q8NHV4;G3V3F1 Q8NHV4-2 466 481 NEDD1 Protein NEDD1 yes no 2 0.014706 42.708 By matching By MS/MS By matching By matching By matching By matching 1 886450 0 886450 0 0 0 0 3092 585 3128 13691 9067 9067 1 IATCSDDNTLK WCPSDFTKIATCSDDN CSDDNTLKIWRLNRGL K I A L K I 1 0 1 2 1 0 0 0 0 1 1 1 0 0 0 1 2 0 0 0 0 11 0 1236.5656 F5GZ90;Q9NZJ0 F5GZ90 334 344 DTL Denticleless protein homolog yes no 2 0.0038421 80.245 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 7561100 754820 1406100 2541200 526910 97343 2234800 3093 499 3129 13692;13693;13694;13695;13696;13697 9068;9069;9070;9071 9070 4 IATGHGQQGVTQVVLK KIITAVPKIATGHGQQ GVTQVVLKGAPGQPGT K I A L K G 1 0 0 0 0 3 0 3 1 1 1 1 0 0 0 0 2 0 0 3 0 16 0 1634.9104 A6NEM2;P51610-2;P51610 A6NEM2 821 836 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2;3 2.3278E-11 95.751 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 1 3 93241000 8552700 15412000 10914000 6179400 10683000 41500000 3094 18 3130 13698;13699;13700;13701;13702;13703;13704;13705;13706;13707;13708;13709;13710 9072;9073;9074;9075;9076;9077;9078;9079 9076 8 IATGHGQQGVTQVVLKGAPGQPGTILR KIITAVPKIATGHGQQ GQPGTILRTVPMGGVR K I A L R T 2 1 0 0 0 4 0 6 1 2 2 1 0 0 2 0 3 0 0 3 0 27 1 2682.4929 A6NEM2;P51610-2;P51610 A6NEM2 821 847 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 4 7.8692E-06 58.924 By MS/MS By matching By matching By matching By matching By matching 1 9031800 9031800 0 0 0 0 0 3095 18 3131 13711 9080 9080 0 IATTTASAATAAAIGATPR SGTRRSPRIATTTASA AAIGATPRAKGKAKH_ R I A P R A 8 1 0 0 0 0 0 1 0 2 0 0 0 0 1 1 5 0 0 0 0 19 0 1714.9214 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9 Q14980-2 2076 2094 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2;3 1.9635E-296 178.52 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 2 2 234640000 76965000 18962000 27086000 4663900 10622000 96341000 3096 1121 3132 13712;13713;13714;13715;13716;13717;13718;13719;13720 9081;9082;9083;9084;9085;9086;9087;9088 9082 8 IATTTASAATAAAIGATPRAK SGTRRSPRIATTTASA IGATPRAKGKAKH___ R I A A K G 9 1 0 0 0 0 0 1 0 2 0 1 0 0 1 1 5 0 0 0 0 21 1 1914.0534 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9 Q14980-2 2076 2096 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 8.7416E-74 119.5 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 26315000 7214100 1860300 10939000 3897100 514980 1888900 3097 1121 3133 13721;13722;13723;13724;13725;13726 9089;9090;9091;9092;9093 9089 5 IATTTASAATAAAIGATPRAKGK SGTRRSPRIATTTASA ATPRAKGKAKH_____ R I A G K A 9 1 0 0 0 0 0 2 0 2 0 2 0 0 1 1 5 0 0 0 0 23 2 2099.1699 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9 Q14980-2 2076 2098 NUMA1 Nuclear mitotic apparatus protein 1 yes no 4 0.01166 36.312 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 5596000 0 1449900 2663700 0 0 1482300 3098 1121 3134 13727;13728;13729 9094;9095 9095 2 IAVAVLEETTR PRESPCGKIAVAVLEE AVLEETTRERTDVIQG K I A T R E 2 1 0 0 0 0 2 0 0 1 1 0 0 0 0 0 2 0 0 2 0 11 0 1200.6714 P49792;E9PGT0;P0DJD0;P0DJD1;F8VYC4;E7ES93;B4DTM4;Q7Z3J3 P49792 2467 2477 RANBP2;RGPD1;RGPD2;RGPD4 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 4 no no 2 0.0046624 75.819 By matching By MS/MS By matching By matching By matching By matching 1 24357000 0 24357000 0 0 0 0 3099 945;1251 3135 13730 9096 9096 1 IAVAVLEETTRER PRESPCGKIAVAVLEE LEETTRERTDVIQGDD K I A E R T 2 2 0 0 0 0 3 0 0 1 1 0 0 0 0 0 2 0 0 2 0 13 1 1485.8151 P49792;E9PGT0;P0DJD0;P0DJD1;F8VYC4;E7ES93;B4DTM4;Q7Z3J3 P49792 2467 2479 RANBP2;RGPD1;RGPD2;RGPD4 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 4 no no 3 0.015116 51.727 By matching By matching By matching By matching By matching By MS/MS 1 3627200 0 0 0 0 0 3627200 3100 945;1251 3136 13731 9097 9097 1 IAVEAQNKYER RDCQEQAKIAVEAQNK EAQNKYERELMLHAAD K I A E R E 2 1 1 0 0 1 2 0 0 1 0 1 0 0 0 0 0 0 1 1 0 11 1 1319.6834 P12270 P12270 1074 1084 TPR Nucleoprotein TPR yes yes 3 0.00031805 98.04 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 3315800 0 900020 791570 474360 0 1149800 3101 827 3137 13732;13733;13734;13735 9098;9099;9100;9101 9100 4 IAVEPVNPSELPK FNTTSVIKIAVEPVNP VNPSELPKMLDGLRKV K I A P K M 1 0 1 0 0 0 2 0 0 1 1 1 0 0 3 1 0 0 0 2 0 13 0 1391.766 B4DK30;Q15029 B4DK30 555 567 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes no 2 0.0022319 69.352 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 27034000 0 8466600 0 0 4682300 13885000 3102 92 3138 13736;13737;13738 9102;9103;9104;9105 9105 3 IAVHCTVRGAK FGIRRNEKIAVHCTVR HCTVRGAKAEEILEKG K I A A K A 2 1 0 0 1 0 0 1 1 1 0 1 0 0 0 0 1 0 0 2 0 11 1 1210.6605 P62913;P62913-2;Q5VVC9;Q5VVC8 P62913 68 78 RPL11 60S ribosomal protein L11 yes no 3 0.015426 59.067 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 3466000 0 893650 2026000 403370 0 142910 3103 998 3139 13739;13740;13741;13742 9106 9106 1 IAVSNLHKETK DYAILAARIAVSNLHK SNLHKETKKVFSDVME R I A T K K 1 0 1 0 0 0 1 0 1 1 1 2 0 0 0 1 1 0 0 1 0 11 1 1238.6983 P23921 P23921 81 91 RRM1 Ribonucleoside-diphosphate reductase large subunit yes yes 3 0.0034215 83.045 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 3325100 0 1121100 1053200 0 295000 855890 3104 870 3140 13743;13744;13745;13746 9107;9108;9109 9108 3 ICAFLLR MDLVKDAKICAFLLRK KICAFLLRKKRFGQWT K I C L R K 1 1 0 0 1 0 0 0 0 1 2 0 0 1 0 0 0 0 0 0 0 7 0 891.50004 Q8N556;E9PDT7;Q8TED9-3;Q8TED9-2;Q8TED9 Q8N556 156 162 AFAP1;AFAP1L1 Actin filament-associated protein 1;Actin filament-associated protein 1-like 1 yes no 2 0.006649 96.048 By matching By matching By matching By matching By MS/MS By matching 1 57202000 0 0 0 0 57202000 0 3105 423 3141 13747 9110 9110 1 ICANDAIPK LPNIKMRKICANDAIP CANDAIPKTCKRKTII K I C P K T 2 0 1 1 1 0 0 0 0 2 0 1 0 0 1 0 0 0 0 0 0 9 0 1000.5012 Q96EY4;H0Y9X1 Q96EY4 161 169 TMA16 Translation machinery-associated protein 16 yes no 2 0.012161 81.95 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 102930000 10006000 0 26102000 0 25545000 41274000 3106 615 3142 13748;13749;13750;13751 9111;9112 9111 2 ICANHYISPDMK MRREQVLKICANHYIS HYISPDMKLTPNAGSD K I C M K L 1 0 1 1 1 0 0 0 1 2 0 1 1 0 1 1 0 0 1 0 0 12 0 1447.6588 P49792 P49792 1242 1253 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 2;3 8.8126E-27 122.18 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 3 2 61116000 13740000 0 4517500 8388800 17099000 17371000 3107 945 3143 13752;13753;13754;13755;13756;13757;13758;13759;13760 9113;9114;9115;9116;9117;9118;9119 9114 7 ICDECNYGSYQGR VRPCTLVRICDECNYG NYGSYQGRCVICGGPG R I C G R C 0 1 1 1 2 1 1 2 0 1 0 0 0 0 0 1 0 0 2 0 0 13 0 1620.6297 Q7RTV0 Q7RTV0 45 57 PHF5A PHD finger-like domain-containing protein 5A yes yes 2 0.001679 82.705 By MS/MS By MS/MS By matching By matching By matching By MS/MS 2 1 1 1 8327400 2711600 1519700 660340 0 0 3435700 3108 1246 3144 13761;13762;13763;13764;13765 9120;9121;9122;9123;9124 9123 5 ICEILQAEK NKLNELEKICEILQAE CEILQAEKYELVTELN K I C E K Y 1 0 0 0 1 1 2 0 0 2 1 1 0 0 0 0 0 0 0 0 0 9 0 1102.5692 P49454 P49454 1306 1314 CENPF Centromere protein F yes yes 2 0.0087373 86.898 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 7295600 424690 1625100 1110400 0 920030 3215300 3109 936 3145 13766;13767;13768;13769;13770 9125 9125 1 ICIVGPNGVGK FGIDMDSRICIVGPNG VGPNGVGKSTLLLLLT R I C G K S 0 0 1 0 1 0 0 3 0 2 0 1 0 0 1 0 0 0 0 2 0 11 0 1112.6012 Q8NE71;Q8NE71-2;H0YGW7 Q8NE71 654 664 ABCF1 ATP-binding cassette sub-family F member 1 yes no 2 0.017051 57.785 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 11616000 1827200 2475800 952280 1028700 0 5331500 3110 1321 3146 13771;13772;13773;13774;13775 9126;9127 9127 2 ICLEREHPEQHVSTVNSK EKLTKQDKICLEREHP HVSTVNSKEEKNPVKE K I C S K E 0 1 1 0 1 1 3 0 2 1 1 1 0 0 1 2 1 0 0 2 0 18 1 2162.0538 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 1039 1056 SETX Probable helicase senataxin yes no 4 0.016062 40.014 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 8788900 817650 1713700 2359200 688030 1319900 1890400 3111 1250 3147 13776;13777;13778;13779;13780;13781 9128 9128 1 ICLIHGPPGTGK KHSPSVAKICLIHGPP HGPPGTGKSKTIVGLL K I C G K S 0 0 0 0 1 0 0 3 1 2 1 1 0 0 2 0 1 0 0 0 0 12 0 1248.6649 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 1958 1969 SETX Probable helicase senataxin yes no 3 0.00017549 84.507 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 3112 1250 3148 13782 9129 9129 1 ICMAQIAYSGNTSNLSYHLEK QWKKIYCRICMAQIAY NLSYHLEKNHPEEFCE R I C E K N 2 0 2 0 1 1 1 1 1 2 2 1 1 0 0 3 1 0 2 0 0 21 0 2399.125 O96006;C9JXP4 O96006 49 69 ZBED1 Zinc finger BED domain-containing protein 1 yes no 3 0.0027993 47.088 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 9472700 0 6478000 0 2994700 0 0 3113 778 3149 13783;13784 9130;9131 9130 2 ICMNEDPAKRPK PHVCKLMKICMNEDPA EDPAKRPKFDMIVPIL K I C P K F 1 1 1 1 1 0 1 0 0 1 0 2 1 0 2 0 0 0 0 0 0 12 2 1457.7119 B7Z1I0;B7Z418;Q13418 B7Z1I0 293 304 ILK Integrin-linked protein kinase yes no 3 0.0056934 82.494 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2296200 0 126730 0 688480 769550 711480 3114 181 3150 13785;13786;13787;13788 9132 9132 1 ICNYEGPAK RKTYPTVKICNYEGPA CNYEGPAKIEVDLVTH K I C A K I 1 0 1 0 1 0 1 1 0 1 0 1 0 0 1 0 0 0 1 0 0 9 0 1050.4804 Q00653-3;Q00653-4;Q00653 Q00653-3 82 90 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes no 2 0.028426 65.224 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 5758100 1285800 1696700 0 616720 0 2158900 3115 1021 3151 13789;13790;13791;13792 9133;9134;9135 9133 3 ICNYVGPAK KKSYPQVKICNYVGPA CNYVGPAKVIVQLVTN K I C A K V 1 0 1 0 1 0 0 1 0 1 0 1 0 0 1 0 0 0 1 1 0 9 0 1020.5063 D6RH30;P19838;P19838-2;D6RC45 D6RH30 95 103 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes no 2 0.016902 72.23 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 6511700 708700 1826400 2656900 0 1319700 0 3116 329 3152 13793;13794;13795;13796 9136 9136 1 ICPGEESYGCDDCGK SDHTEHQRICPGEESY YGCDDCGKAFSQHSHL R I C G K A 0 0 0 2 3 0 2 3 0 1 0 1 0 0 1 1 0 0 1 0 0 15 0 1745.6331 O43309 O43309 267 281 ZSCAN12 Zinc finger and SCAN domain-containing protein 12 yes yes 2 0.021618 41.838 By matching By matching By matching By matching By matching By MS/MS 1 497330 0 0 0 0 0 497330 3117 714 3153 13797 9137 9137 1 ICRDPQTPVLQTK PSKSSVTKICRDPQTP QTPVLQTKHRARAVTC K I C T K H 0 1 0 1 1 2 0 0 0 1 1 1 0 0 2 0 2 0 0 1 0 13 1 1554.8188 Q9ULW0;Q96RR5 Q9ULW0 363 375 TPX2;HCA90 Targeting protein for Xklp2 yes no 2;3 0.0018134 85.837 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 1 2 2 229210000 23984000 32946000 45477000 14996000 31862000 79946000 3118 1611 3154 13798;13799;13800;13801;13802;13803;13804;13805;13806;13807;13808;13809 9138;9139;9140;9141;9142;9143;9144;9145;9146 9139 9 ICRDPQTPVLQTKHR PSKSSVTKICRDPQTP PVLQTKHRARAVTCKS K I C H R A 0 2 0 1 1 2 0 0 1 1 1 1 0 0 2 0 2 0 0 1 0 15 2 1847.9788 Q9ULW0;Q96RR5 Q9ULW0 363 377 TPX2;HCA90 Targeting protein for Xklp2 yes no 3;4 0.0022307 75.316 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 1 1 2 1 34805000 12492000 4633100 7434300 592020 5739800 3913800 3119 1611 3155 13810;13811;13812;13813;13814;13815;13816;13817;13818 9147;9148;9149;9150;9151 9147 5 ICTGQVPSAEDEPAPK HLFDLNCKICTGQVPS AEDEPAPKKQKLSASV K I C P K K 2 0 0 1 1 1 2 1 0 1 0 1 0 0 3 1 1 0 0 1 0 16 0 1697.7931 Q9BTC0;Q9BTC0-1 Q9BTC0 855 870 DIDO1 Death-inducer obliterator 1 yes no 2 0.0043049 51.495 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 61072000 10811000 10587000 12504000 5941000 10035000 11193000 3120 1447 3156 13819;13820;13821;13822;13823;13824 9152;9153;9154;9155;9156 9154 5 ICTGQVPSAEDEPAPKKQK HLFDLNCKICTGQVPS EPAPKKQKLSASVKKE K I C Q K L 2 0 0 1 1 2 2 1 0 1 0 3 0 0 3 1 1 0 0 1 0 19 2 2082.0416 Q9BTC0;Q9BTC0-1 Q9BTC0 855 873 DIDO1 Death-inducer obliterator 1 yes no 3;4 0.00050267 78.228 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 3 2 2 2 3 2 34601000 5753900 4528000 6550900 2986700 7565400 7216100 3121 1447 3157 13825;13826;13827;13828;13829;13830;13831;13832;13833;13834;13835;13836;13837;13838 9157;9158;9159;9160;9161;9162;9163;9164 9157 8 ICTLGLQR GALVELRKICTLGLQR ICTLGLQRIFYLKLED K I C Q R I 0 1 0 0 1 1 0 1 0 1 2 0 0 0 0 0 1 0 0 0 0 8 0 959.52224 Q92570;Q92570-3 Q92570 593 600 NR4A3 Nuclear receptor subfamily 4 group A member 3 yes no 2 0.012699 90.37 By matching By matching By matching By matching By matching By MS/MS 1 1 8084800 0 0 0 0 4308700 3776100 3122 1352 3158 13839;13840 9165 9165 1 ICVNGDDAHPLWK VKFDMFSKICVNGDDA DDAHPLWKWMKIQPKG K I C W K W 1 0 1 2 1 0 0 1 1 1 1 1 0 0 1 0 0 1 0 1 0 13 0 1523.7191 P36969-2;P36969 P36969-2 106 118 GPX4 Phospholipid hydroperoxide glutathione peroxidase, mitochondrial yes no 2;3 6.1675E-110 150.51 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 2 1 2 170300000 93925000 8635200 0 14294000 43309000 10134000 3123 902 3159 13841;13842;13843;13844;13845;13846;13847;13848;13849 9166;9167;9168;9169;9170;9171;9172;9173;9174 9166 9 IDALNENKVLVLDTDYKK TKIPAVFKIDALNENK VLDTDYKKYLLFCMEN K I D K K Y 1 0 2 3 0 0 1 0 0 1 3 3 0 0 0 0 1 0 1 2 0 18 2 2090.1259 CON__P02754 CON__P02754 84 101 yes yes 3;4 0 202.96 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 2 2 1 445360000 72826000 49870000 98329000 124800000 0 99528000 + 3124 292 3160 13850;13851;13852;13853;13854;13855;13856;13857 9175;9176;9177;9178;9179;9180;9181;9182 9175 8 IDCQQPLK TFCDTFPKIDCQQPLK IDCQQPLKGSKTERKT K I D L K G 0 0 0 1 1 2 0 0 0 1 1 1 0 0 1 0 0 0 0 0 0 8 0 1000.5012 Q5CZC0-2;Q5CZC0 Q5CZC0-2 2196 2203 FSIP2 Fibrous sheath-interacting protein 2 yes no 2 0.014854 87.181 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 59473000 16307000 31585000 0 11582000 0 0 3125 1179 3161 13858;13859;13860 9183;9184 9184 2 IDEAESLNDEELEEKEK AQKEEQLKIDEAESLN EELEEKEKLLTQGFTN K I D E K L 1 0 1 2 0 0 7 0 0 1 2 2 0 0 0 1 0 0 0 0 0 17 1 2018.9168 F5GZI1;O60264 F5GZI1 763 779 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 3 0.00168 58.461 By matching By MS/MS By matching By matching By matching By matching 1 4658000 0 4658000 0 0 0 0 3126 500 3162 13861 9185;9186 9186 2 IDEPLEGSEDR HESGASIKIDEPLEGS PLEGSEDRIITITGTQ K I D D R I 0 1 0 2 0 0 3 1 0 1 1 0 0 0 1 1 0 0 0 0 0 11 0 1258.5677 P61978-3;P61978-2;B4DFF1;P61978;Q5T6W5 P61978-3 399 409 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.0041726 78.342 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 5254900 0 92914 688290 0 960870 3512800 3127 984 3163 13862;13863;13864;13865 9187;9188;9189;9190 9190 4 IDGVFAACQSGSFDK AGVIPAEKIDGVFAAC CQSGSFDKLEAVVKDL K I D D K L 2 0 0 2 1 1 0 2 0 1 0 1 0 2 0 2 0 0 0 1 0 15 0 1600.7192 P35249;H7C1P0 P35249 274 288 RFC4 Replication factor C subunit 4 yes no 2 1.1687E-20 108.66 By matching By MS/MS By matching By matching By matching By matching 1 37783000 0 37783000 0 0 0 0 3128 894 3164 13866 9191 9191 1 IDLKFIDTTSK TKRRALEKIDLKFIDT KFIDTTSKFGHGRFQT K I D S K F 0 0 0 2 0 0 0 0 0 2 1 2 0 1 0 1 2 0 0 0 0 11 1 1279.7024 P39023;G5E9G0 P39023 363 373 RPL3 60S ribosomal protein L3 yes no 3 9.4173E-08 108.35 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 70564000 26857000 17035000 0 19867000 0 6806000 3129 905 3165 13867;13868;13869;13870 9192;9193;9194;9195 9192 4 IDLLASDPHEALICK EYSGSSEKIDLLASDP PHEALICKSERVHSKS K I D C K S 2 0 0 2 1 0 1 0 1 2 3 1 0 0 1 1 0 0 0 0 0 15 0 1693.8709 E9PFZ0;P38398-4;P38398-2;P38398;E9PFC7;E7EP70;F8W8H7;E7EMP0;E9PH68;E7EWN5;Q3B891;C9IZW4;H0Y8D8 E9PFZ0 382 396 BRCA1 Breast cancer type 1 susceptibility protein yes no 2 0.0038733 55.66 By matching By MS/MS By matching By matching By matching By matching 1 3940700 0 3940700 0 0 0 0 3130 426 3166 13871 9196 9196 1 IDLTSLR VIGCEKEKIDLTSLRA KIDLTSLRASIDGCIK K I D L R A 0 1 0 1 0 0 0 0 0 1 2 0 0 0 0 1 1 0 0 0 0 7 0 816.47052 Q08AF3;Q08AF3-2;B4E128 Q08AF3 246 252 SLFN5 Schlafen family member 5 yes no 2 0.00068644 111.04 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 3131 1049 3167 13872 9197 9197 1 IDNLDVNR AEIKNSLKIDNLDVNR IDNLDVNRCIEALDEL K I D N R C 0 1 2 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 8 0 957.48796 O75475 O75475 365 372 PSIP1 PC4 and SFRS1-interacting protein yes yes 2 0.014776 87.476 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2877900 0 729530 0 0 711840 1436500 3132 741 3168 13873;13874;13875 9198;9199 9199 2 IDNSNTPFLPK PQLKFREKIDNSNTPF SNTPFLPKIFIKPNAQ K I D P K I 0 0 2 1 0 0 0 0 0 1 1 1 0 1 2 1 1 0 0 0 0 11 0 1244.6401 Q01780;Q01780-2;B4DKG8 Q01780 191 201 EXOSC10 Exosome component 10 yes no 2 7.0863E-55 136.96 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 45317000 11846000 4999800 16058000 2047300 3042200 7323400 3133 1030 3169 13876;13877;13878;13879;13880;13881 9200;9201;9202;9203;9204 9204 5 IDRPEDAGEKEHVTK ENGTENLKIDRPEDAG GEKEHVTKSSVGHKNE K I D T K S 1 1 0 2 0 0 3 1 1 1 0 2 0 0 1 0 1 0 0 1 0 15 2 1722.8537 Q03164-2;Q03164;E9PQG7 Q03164-2 2717 2731 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 4 0.036724 37.657 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 5776400 711150 875010 1013600 539990 1287900 1348800 3134 464 3170 13882;13883;13884;13885;13886;13887 9205 9205 1 IDTGENKFPGSAPQQHSILSNQTSK STLLSQAKIDTGENKF ILSNQTSKSSDNRETP K I D S K S 1 0 2 1 0 3 1 2 1 2 1 2 0 1 2 4 2 0 0 0 0 25 1 2683.3202 Q5FWF5;Q5FWF5-2 Q5FWF5 540 564 ESCO1 N-acetyltransferase ESCO1 yes no 4 0.0012154 51.827 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 15369000 3381500 2201700 2630700 2195200 2080200 2879700 3135 1180 3171 13888;13889;13890;13891;13892;13893 9206;9207 9207 2 IDTHPSPSHSSTVK EREQKRRKIDTHPSPS PSHSSTVKDSLIELKE K I D V K D 0 0 0 1 0 0 0 0 2 1 0 1 0 0 2 4 2 0 0 1 0 14 0 1491.7318 Q8NI27;Q8NI27-2;B7ZBA0;H0Y594;H7C477;H0Y7U4 Q8NI27 1412 1425 THOC2 THO complex subunit 2 yes no 3 6.0098E-08 98.337 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 3483500 639500 0 1373700 475220 0 995110 3136 1330 3172 13894;13895;13896;13897 9208;9209 9208 2 IDTIEIITDRQSGK DYFEEYGKIDTIEIIT ITDRQSGKKRGFGFVT K I D G K K 0 1 0 2 0 1 1 1 0 4 0 1 0 0 0 1 2 0 0 0 0 14 1 1587.8468 P22626;P22626-2 P22626 138 151 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2 1.6988E-07 98.592 By matching By MS/MS By matching By matching By matching By matching 1 954830 0 954830 0 0 0 0 3137 863 3173 13898 9210 9210 1 IDTIEIITDRQSGKK DYFEEYGKIDTIEIIT TDRQSGKKRGFGFVTF K I D K K R 0 1 0 2 0 1 1 1 0 4 0 2 0 0 0 1 2 0 0 0 0 15 2 1715.9418 P22626;P22626-2 P22626 138 152 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 3;4 6.7649E-13 102.9 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 3 3 3 150190000 27162000 0 15081000 42078000 37770000 28095000 3138 863 3174 13899;13900;13901;13902;13903;13904;13905;13906;13907;13908;13909;13910 9211;9212;9213;9214;9215;9216;9217;9218;9219;9220 9218 9 IDVASIKEK KEASTETKIDVASIKE DVASIKEKVKKAKNKK K I D E K V 1 0 0 1 0 0 1 0 0 2 0 2 0 0 0 1 0 0 0 1 0 9 1 1001.5757 Q13601-2;Q13601 Q13601-2 284 292 KRR1 KRR1 small subunit processome component homolog yes no 2 0.023432 99.013 By matching By matching By matching By matching By MS/MS By matching 1 1 2120900 0 0 0 0 970800 1150200 3139 1087 3175 13911;13912 9221 9221 1 IDVASIKEKVK KEASTETKIDVASIKE ASIKEKVKKAKNKKLG K I D V K K 1 0 0 1 0 0 1 0 0 2 0 3 0 0 0 1 0 0 0 2 0 11 2 1228.7391 Q13601-2;Q13601 Q13601-2 284 294 KRR1 KRR1 small subunit processome component homolog yes no 3 0.0061768 89.561 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 12865000 3100300 2534100 3205800 2224700 1799700 0 3140 1087 3176 13913;13914;13915;13916;13917 9222;9223;9224;9225 9222 4 IEALQNHENESVYK EECGGLDKIEALQNHE HENESVYKASLSLIEK K I E Y K A 1 0 2 0 0 1 3 0 1 1 1 1 0 0 0 1 0 0 1 1 0 14 0 1672.8057 P52292 P52292 473 486 KPNA2 Importin subunit alpha-1 yes yes 3 0.012609 47.242 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5388800 0 2600500 402550 0 0 2385800 3141 957 3177 13918;13919;13920 9226 9226 1 IEANVNSVVTEEK LLAVHAVKIEANVNSV NSVVTEEKDDAVTSAG K I E E K D 1 0 2 0 0 0 3 0 0 1 0 1 0 0 0 1 1 0 0 3 0 13 0 1430.7253 Q8NFC6 Q8NFC6 1638 1650 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 9.9342E-91 143.94 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 21850000 3792100 4099700 3859400 0 4009800 6089300 3142 1325 3178 13921;13922;13923;13924;13925 9227;9228;9229;9230 9227 4 IEAVEMHLTR KLLEIQGKIEAVEMHL AVEMHLTREHMKRVLG K I E T R E 1 1 0 0 0 0 2 0 1 1 1 0 1 0 0 0 1 0 0 1 0 10 0 1197.6176 Q9UKN8 Q9UKN8 676 685 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 3 0.0026539 90.827 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4707400 325390 0 0 0 560310 3821700 3143 1602 3179 13926;13927;13928 9231 9231 1 IEAVEMHLTREHMK KLLEIQGKIEAVEMHL HLTREHMKRVLGEVYL K I E M K R 1 1 0 0 0 0 3 0 2 1 1 1 2 0 0 0 1 0 0 1 0 14 1 1722.8545 Q9UKN8 Q9UKN8 676 689 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 3;4 0.01347 50.222 By matching By matching By MS/MS By matching By matching By MS/MS 2 1 2 7146000 0 0 1575600 0 807490 4763000 3144 1602 3180 13929;13930;13931;13932;13933 9232;9233 9233 1 IEAVYVSR VLYDRPLKIEAVYVSR IEAVYVSRRRSRSPLD K I E S R R 1 1 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 2 0 8 0 935.50763 Q96T37-2;Q96T37-3;Q96T37 Q96T37-2 247 254 RBM15 Putative RNA-binding protein 15 yes no 2 0.0073282 97.431 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 1 7618500 1012700 737440 844730 774140 1835100 2414500 3145 1421 3181 13934;13935;13936;13937;13938;13939 9234;9235 9235 2 IECEIKINHEGEVNR GFGSVTGKIECEIKIN NHEGEVNRARYMPQNP K I E N R A 0 1 2 0 1 0 4 1 1 3 0 1 0 0 0 0 0 0 0 1 0 15 1 1838.8945 Q16576;E9PC52;Q16576-2;Q5JP01 Q16576 114 128 RBBP7 Histone-binding protein RBBP7 yes no 3;4 0.00047307 75.02 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 118390000 3485900 24013000 33432000 2137800 4608900 50710000 3146 1153 3182 13940;13941;13942;13943;13944;13945;13946;13947;13948;13949;13950;13951 9236;9237;9238;9239;9240;9241;9242;9243;9244;9245 9240 10 IECEIKINHEGEVNRAR GFGSVTGKIECEIKIN EGEVNRARYMPQNPHI K I E A R Y 1 2 2 0 1 0 4 1 1 3 0 1 0 0 0 0 0 0 0 1 0 17 2 2066.0327 Q16576;E9PC52;Q16576-2;Q5JP01 Q16576 114 130 RBBP7 Histone-binding protein RBBP7 yes no 3;4;5 0.0050324 68.044 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 3 3 3 2 3 361130000 14893000 36735000 193130000 10359000 10039000 95976000 3147 1153 3183 13952;13953;13954;13955;13956;13957;13958;13959;13960;13961;13962;13963;13964;13965;13966;13967 9246;9247;9248;9249;9250;9251;9252;9253 9247 8 IEDGISSTLPSKESR NLERNDLRIEDGISST TLPSKESRRKGGLDYL R I E S R R 0 1 0 1 0 0 2 1 0 2 1 1 0 0 1 4 1 0 0 0 0 15 1 1617.821 Q86V48-2;Q86V48-3;Q86V48;E5RFK8 Q86V48-2 242 256 LUZP1 Leucine zipper protein 1 yes no 3 0.0039235 55.724 By matching By matching By matching By matching By matching By MS/MS 1 1 1774400 0 0 0 0 466710 1307700 3148 1265 3184 13968;13969 9254 9254 1 IEDVASHCLPQK CSTDQEEKIEDVASHC ASHCLPQKDLYTAEEE K I E Q K D 1 0 0 1 1 1 1 0 1 1 1 1 0 0 1 1 0 0 0 1 0 12 0 1395.6816 Q8TD26;Q8TD26-2;Q8TD26-3;C9JFU2 Q8TD26 48 59 CHD6 Chromodomain-helicase-DNA-binding protein 6 yes no 3 0.023759 48.188 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 3159000 162290 858940 456380 0 625990 1055400 3149 1335 3185 13970;13971;13972;13973;13974 9255;9256 9255 2 IEEDTENMAEK LLQAEGAKIEEDTENM DTENMAEKFLDGELPL K I E E K F 1 0 1 1 0 0 4 0 0 1 0 1 1 0 0 0 1 0 0 0 0 11 0 1307.5551 Q9H9H4;F5H1F6;F5H4M0 Q9H9H4 117 127 VPS37B Vacuolar protein sorting-associated protein 37B yes no 2 0.0083625 67.214 By matching By matching By matching By matching By matching By MS/MS 1 1 544510 0 0 0 0 178270 366240 3150 1508 3186 13975;13976 9257 9257 1 IEEIKTPDSFEESQGEEIGK EHNGNSERIEEIKTPD SQGEEIGKVERSDSKS R I E G K V 0 0 0 1 0 1 6 2 0 3 0 2 0 1 1 2 1 0 0 0 0 20 1 2264.0696 Q5VZK9-2;Q5VZK9 Q5VZK9-2 1123 1142 LRRC16A Leucine-rich repeat-containing protein 16A yes no 3 0.00014672 65.954 By matching By MS/MS By matching By matching By matching By matching 1 5436600 0 5436600 0 0 0 0 3151 1212 3187 13977 9258;9259 9259 2 IEELDQENEAALENGIK KKLKKVDKIEELDQEN AALENGIKNEENTEPG K I E I K N 2 0 2 1 0 1 5 1 0 2 2 1 0 0 0 0 0 0 0 0 0 17 0 1913.9218 P43243;A8MXP9;D6REM6;B3KM87;P43243-2;Q68E03 P43243 720 736 MATR3;DKFZp686L22104 Matrin-3 yes no 2 0 264 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 20247000 0 11935000 8311700 0 0 0 3152 52 3188 13978;13979;13980 9260;9261;9262 9262 3 IEELNKTANGNVEAK SNPYLVRRIEELNKTA ANGNVEAKVVCLFRRR R I E A K V 2 0 3 0 0 0 3 1 0 1 1 2 0 0 0 0 1 0 0 1 0 15 1 1628.837 Q13330;Q13330-3;E7ESY4;Q13330-2;H7C3F3;O94776 O94776 27 41 MTA1;MTA2 Metastasis-associated protein MTA1;Metastasis-associated protein MTA2 no no 2;3 2.3745E-30 114.64 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 2 1 2 69030000 654850 17652000 32680000 0 874010 17169000 3153 754;1078 3189 13981;13982;13983;13984;13985;13986;13987;13988 9263;9264;9265;9266;9267;9268 9263 6 IEEMLENAER IQSFCLEKIEEMLENA EMLENAERERLGNSHQ K I E E R E 1 1 1 0 0 0 4 0 0 1 1 0 1 0 0 0 0 0 0 0 0 10 0 1232.5707 P49959-2;F8W7U8;P49959;B3KTC7 P49959-2 340 349 MRE11A Double-strand break repair protein MRE11A yes no 2 0.017612 65.627 By matching By matching By matching By matching By matching By MS/MS 1 1 3317300 0 0 420330 0 0 2896900 3154 558 3190 13989;13990 9269 9269 1 IEENSLKEEESIEGEK PPAEDGIKIEENSLKE EESIEGEKEVKSTAPE K I E E K E 0 0 1 0 0 0 7 1 0 2 1 2 0 0 0 2 0 0 0 0 0 16 1 1861.8793 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1540 1555 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.00041595 71.98 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 17888000 0 6473200 3621200 0 501700 7291900 3155 486 3191 13991;13992;13993;13994 9270;9271 9271 2 IEENSLKEEESIEGEKEVK PPAEDGIKIEENSLKE IEGEKEVKSTAPETAI K I E V K S 0 0 1 0 0 0 8 1 0 2 1 3 0 0 0 2 0 0 0 1 0 19 2 2218.0853 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1540 1558 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3;4 1.5999E-100 136.34 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 2 30304000 0 9935400 6917900 0 0 13451000 3156 486 3192 13995;13996;13997;13998;13999;14000 9272;9273;9274;9275;9276;9277;9278;9279;9280 9277 9 IEEQFANLHIVK ________________ FANLHIVKCSLGTKEP K I E V K C 1 0 1 0 0 1 2 0 1 2 1 1 0 1 0 0 0 0 0 1 0 12 0 1439.7773 G3V4B8;Q96FK6 G3V4B8 4 15 WDR89 WD repeat-containing protein 89 yes no 3 0.0018353 75.566 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 24383000 14078000 0 0 0 0 10306000 3157 586 3193 14001;14002 9281;9282 9281 2 IEESGNDEARVEGQATDEK TTSDEPERIEESGNDE EGQATDEKKEPKEPRE R I E E K K 2 1 1 2 0 1 5 2 0 1 0 1 0 0 0 1 1 0 0 1 0 19 1 2075.9243 Q8TAQ2-2;F8VTJ5;Q8TAQ2;F8VXC8 Q8TAQ2-2 782 800 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 3 0.039803 33.667 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 2926900 291860 492940 1024300 0 611090 506750 3158 539 3194 14003;14004;14005;14006;14007 9283 9283 1 IEEYISK MFAEIMMKIEEYISKQ KIEEYISKQAKASEVM K I E S K Q 0 0 0 0 0 0 2 0 0 2 0 1 0 0 0 1 0 0 1 0 0 7 0 880.4542 Q8WWY3;E7EVX8;Q8WWY3-2;E7ESA8;E7EU94;E7ESX0;E7EN72 Q8WWY3 67 73 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes no 2 0.038613 83.753 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5359800 473020 1336600 0 0 0 3550200 3159 1342 3195 14008;14009;14010 9284 9284 1 IEEYISKQAK MFAEIMMKIEEYISKQ EYISKQAKASEVMGPV K I E A K A 1 0 0 0 0 1 2 0 0 2 0 2 0 0 0 1 0 0 1 0 0 10 1 1207.6449 Q8WWY3;E7EVX8;Q8WWY3-2;E7ESA8;E7EU94;E7ESX0;E7EN72 Q8WWY3 67 76 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes no 2 0.00013253 108.47 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 7694300 0 1146000 1459800 897230 2042600 2148700 3160 1342 3196 14011;14012;14013;14014;14015 9285;9286 9285 2 IEFAEQINK NALFEGRRIEFAEQIN EFAEQINKMEARPRRQ R I E N K M 1 0 1 0 0 1 2 0 0 2 0 1 0 1 0 0 0 0 0 0 0 9 0 1090.5659 Q9H307;Q9H307-2 Q9H307 272 280 PNN Pinin yes no 2 0.0071581 89.047 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 3245600 969470 711810 0 232380 0 1331900 3161 1486 3197 14016;14017;14018;14019 9287;9288;9289 9287 3 IEFEPASK AKKVLLQKIEFEPASK IEFEPASKSFSYQLEA K I E S K S 1 0 0 0 0 0 2 0 0 1 0 1 0 1 1 1 0 0 0 0 0 8 0 919.4651 Q9P275;Q9P275-2;F5H3B9 Q9P275 40 47 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 6.1599E-16 128.61 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 58260000 12463000 5077000 6876900 5407000 12749000 15687000 3162 1576 3198 14020;14021;14022;14023;14024;14025;14026 9290;9291;9292;9293;9294;9295 9292 6 IEHDVVMK LEVGIRKKIEHDVVMK IEHDVVMKASSSLPKK K I E M K A 0 0 0 1 0 0 1 0 1 1 0 1 1 0 0 0 0 0 0 2 0 8 0 969.49535 Q9UNZ5 Q9UNZ5 61 68 C19orf53 Leydig cell tumor 10 kDa protein homolog yes yes 2 9.4414E-05 113.26 By matching By matching By MS/MS By matching By matching By matching 1 1104600 0 0 1104600 0 0 0 3163 1619 3199 14027 9296 9296 1 IEHQTITTPSK GVGVEKLRIEHQTITT QTITTPSKKKIEISTI R I E S K K 0 0 0 0 0 1 1 0 1 2 0 1 0 0 1 1 3 0 0 0 0 11 0 1253.6616 C9JU95;P40938 C9JU95 69 79 RFC3 Replication factor C subunit 3 yes no 3 0.037738 46.844 By matching By matching By matching By matching By matching By MS/MS 1 802790 0 0 0 0 0 802790 3164 270 3200 14028 9297 9297 1 IEIPSCKDVAPVEK KDQTLKARIEIPSCKD KDVAPVEKTIKLLPSS R I E E K T 1 0 0 1 1 0 2 0 0 2 0 2 0 0 2 1 0 0 0 2 0 14 1 1583.8229 A6NHR9;A6NHR9-2 A6NHR9 1013 1026 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes no 3 0.0015423 82.925 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 14894000 6943000 0 7215600 0 735720 0 3165 23 3201 14029;14030;14031 9298;9299;9300 9298 3 IEISELNRVIQR GDSLKEIKIEISELNR ELNRVIQRLQGEIAHV K I E Q R L 0 2 1 0 0 1 2 0 0 3 1 0 0 0 0 1 0 0 0 1 0 12 1 1468.8362 P35908;CON__P35908;P04264;CON__P04264 P35908 394 405 KRT2;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1 no no 3 0.027218 48.998 By matching By MS/MS By matching By matching By matching By matching 1 11380000 0 11380000 0 0 0 0 + 3166 302;789 3202 14032 9301 9301 1 IEKFHSQLMR DQAQDVKKIEKFHSQL KFHSQLMRLMVAKEAR K I E M R L 0 1 0 0 0 1 1 0 1 1 1 1 1 1 0 1 0 0 0 0 0 10 1 1287.6758 P49458 P49458 62 71 SRP9 Signal recognition particle 9 kDa protein yes yes 3 0.0086687 82.261 By matching By matching By matching By matching By matching By MS/MS 1 1 3189300 0 0 873060 0 0 2316300 3167 937 3203 14033;14034 9302 9302 1 IEKGVGGNNGGNGNGGGAFSQAR DEMTAVVKIEKGVGGN GGAFSQARSSSTGSSS K I E A R S 2 1 4 0 0 1 1 9 0 1 0 1 0 1 0 1 0 0 0 1 0 23 1 2116.9998 P08047;G5E9M8;H3BUU5;H3BVI2 P08047 17 39 SP1 Transcription factor Sp1 yes no 3 0.0024337 49.765 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 135810000 6241800 28126000 44835000 0 17440000 39164000 3168 804 3204 14035;14036;14037;14038;14039 9303;9304;9305;9306;9307 9305 5 IEKYNVPLNRLK ENTDASGKIEKYNVPL NVPLNRLKMMFEKGEP K I E L K M 0 1 2 0 0 0 1 0 0 1 2 2 0 0 1 0 0 0 1 1 0 12 2 1485.8667 F8VQE1;Q9UHB6-2;B4DN52;Q9UHB6;Q9UHB6-4;F8VRN8 F8VQE1 27 38 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.011116 69.261 By MS/MS By matching By matching By matching By matching By matching 1 1458500 1458500 0 0 0 0 0 3169 107 3205 14040 9308 9308 1 IELWEQEHSK LEEELKARIELWEQEH LWEQEHSKAFMVNGQK R I E S K A 0 0 0 0 0 1 3 0 1 1 1 1 0 0 0 1 0 1 0 0 0 10 0 1297.6303 H9KV59;O43663;H0YL53;G3V3N7 H9KV59 410 419 PRC1 Protein regulator of cytokinesis 1 no no 2;3 2.8354E-77 152.04 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 2 2 57721000 0 12870000 3545100 8560700 8548500 24196000 3170 676 3206 14041;14042;14043;14044;14045;14046;14047;14048;14049;14050 9309;9310;9311;9312;9313;9314;9315;9316;9317;9318;9319 9312 11 IENKPLQEQLSVNQIK TRPQIRQKIENKPLQE QLSVNQIKTEPVDYEF K I E I K T 0 0 2 0 0 3 2 0 0 2 2 2 0 0 1 1 0 0 0 1 0 16 1 1880.0367 F5H4I8;E9PCM7;F5H2R1;P37275;Q2KJ05;F5H8J0;F5H838;Q5VZ84;G3V1R3;F5H1R1;H0YND9;H0YME0;H0YKM9;H0YMD3;H0YK86 F5H4I8 265 280 ZEB1 Zinc finger E-box-binding homeobox 1 yes no 3 1.3669E-26 108.06 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 6685000 0 1860200 0 0 0 4824800 3171 415 3207 14051;14052 9320;9321;9322 9322 3 IEPAEELNSNDMK SLRTSAKRIEPAEELN ELNSNDMKTNKEEHKL R I E M K T 1 0 2 1 0 0 3 0 0 1 1 1 1 0 1 1 0 0 0 0 0 13 0 1488.6766 P46013;F5H4V4;P46013-2 P46013 3059 3071 MKI67 Antigen KI-67 no no 2 0.001841 85.271 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3418700 0 1018600 1149000 461120 0 790010 3172 919;920 3208 14053;14054;14055;14056 9323 9323 0 IEPGAEALR QQLVQEEKIEPGAEAL EPGAEALRTSGLARGA K I E L R T 2 1 0 0 0 0 2 1 0 1 1 0 0 0 1 0 0 0 0 0 0 9 0 954.51345 H9KV46;Q86Y91;Q86Y91-2;Q86Y91-3;Q86Y91-4 H9KV46 560 568 KIF18B Kinesin-like protein KIF18B yes no 2 0.017155 71.614 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 3823300 594510 757220 0 0 750500 1721000 3173 675 3209 14057;14058;14059;14060 9324 9324 1 IEPGAEALRTSGLAR QQLVQEEKIEPGAEAL LRTSGLARGAPLAQEL K I E A R G 3 2 0 0 0 0 2 2 0 1 2 0 0 0 1 1 1 0 0 0 0 15 1 1539.8369 H9KV46;Q86Y91;Q86Y91-2;Q86Y91-3;Q86Y91-4 H9KV46 560 574 KIF18B Kinesin-like protein KIF18B yes no 3 0.020961 42.317 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 26241000 0 5775500 5087300 2910300 407970 12060000 3174 675 3210 14061;14062;14063;14064;14065 9325 9325 1 IEPLGYCEDAESNRQLESTEFNK ENTLERNKIEPLGYCE LESTEFNKSNLEVVDT K I E N K S 1 1 2 1 1 1 5 1 0 1 2 1 0 1 1 2 1 0 1 0 0 23 1 2728.2286 Q92576-2;Q92576;E7EVH3;E9PE34;B3KP41;D6R9X2 Q92576-2 308 330 PHF3 PHD finger protein 3 yes no 3 9.9357E-30 97.271 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 49506000 12968000 28658000 0 0 7880300 0 3175 1353 3211 14066;14067;14068 9326;9327;9328 9328 3 IEQVDKEDEITEK PTCSKKRKIEQVDKED KEDEITEKKAKKAKIK K I E E K K 0 0 0 2 0 1 4 0 0 2 0 2 0 0 0 0 1 0 0 1 0 13 1 1574.7675 Q9Y2X3 Q9Y2X3 445 457 NOP58 Nucleolar protein 58 yes yes 2;3 1.7753E-05 98.368 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 3 2 1 2 2 44369000 17065000 0 6709400 2349900 13874000 4371100 3176 1640 3212 14069;14070;14071;14072;14073;14074;14075;14076;14077;14078 9329;9330;9331;9332;9333;9334;9335;9336 9329 8 IERVMDNNTTVKMVPIK IQDEDSTRIERVMDNN TVKMVPIKIVHSESQP R I E I K I 0 1 2 1 0 0 1 0 0 2 0 2 2 0 1 0 2 0 0 3 0 17 2 1987.0595 C9IZC6;B3KU73;F5H3B6;Q13796 C9IZC6 32 48 SHROOM2 Protein Shroom2 yes no 4 0.016567 47.506 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 9161800 330330 1206600 2218400 1359900 1553300 2493300 3177 76 3213 14079;14080;14081;14082;14083;14084 9337 9337 10 1 IESEELDR I E D R 0 1 0 1 0 0 3 0 0 1 1 0 0 0 0 1 0 0 0 0 0 8 0 989.46655 REV__Q9Y6N9-5 yes yes 2 0.018279 81.296 By matching By matching By matching By matching By MS/MS By matching 1 6453100 0 0 0 0 6453100 0 + 3178 1681 3214 14085 9338 9338 1 IESFGSPK DGMDTVKKIESFGSPK IESFGSPKGSVCRRIT K I E P K G 0 0 0 0 0 0 1 1 0 1 0 1 0 1 1 2 0 0 0 0 0 8 0 863.43888 P49792;E9PGT0 P49792 3202 3209 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 2 0.034579 69.812 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 5773900 824440 959050 0 532260 1127700 2330400 3179 945 3215 14086;14087;14088;14089;14090 9339 9339 1 IESHETANLQDDRNSQSSSVSYLESK LNAIESTKIESHETAN SVSYLESKSVKSKHTK K I E S K S 1 1 2 2 0 2 3 0 1 1 2 1 0 0 0 7 1 0 1 1 0 26 1 2923.3432 Q92576-2;Q92576;E7EVH3;E9PE34;B3KP41;D6R9X2 Q92576-2 371 396 PHF3 PHD finger protein 3 yes no 4 7.8571E-29 92.518 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 50078000 0 10778000 7356100 6186700 6290500 19467000 3180 1353 3216 14091;14092;14093;14094;14095 9340;9341;9342;9343 9341 4 IESQKLNFKEK KPGGGDVKIESQKLNF QKLNFKEKAQAKVGSL K I E E K A 0 0 1 0 0 1 2 0 0 1 1 3 0 1 0 1 0 0 0 0 0 11 2 1362.7507 E7EVA0;P27816-6;P27816;P27816-2;P27816-4;E9PGM5;P27816-5;B9ZVR1;H0Y2V1;B4DSQ1;F8W9U4;H7C4C5 E7EVA0 2201 2211 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 2.389E-07 109.16 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 8721400 3242100 2169400 0 3309900 0 0 3181 388 3217 14096;14097;14098 9344;9345;9346 9344 3 IESSSVLSKPCSVTVASEASK VSSQPCTKIESSSVLS TVASEASKKKVDVIDL K I E S K K 2 0 0 0 1 0 2 0 0 1 1 2 0 0 1 7 1 0 0 3 0 21 1 2165.0886 B4DGW0;O75928-2;O75928;F8W7X5 B4DGW0 154 174 PIAS2 E3 SUMO-protein ligase PIAS2 yes no 3 0.0022574 49.655 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 7356400 0 1163100 1014600 0 1570900 3607800 3182 89 3218 14099;14100;14101;14102 9347;9348 9348 2 IETAQRQCPETEPHDTK NPDVLDSRIETAQRQC ETEPHDTKEENSRDLE R I E T K E 1 1 0 1 1 2 3 0 1 1 0 1 0 0 2 0 3 0 0 0 0 17 1 2038.9378 Q8NFC6 Q8NFC6 2795 2811 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 4 0.0045484 48.216 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1800200 0 586000 397670 0 0 816550 3183 1325 3219 14103;14104;14105 9349 9349 1 IETIEVMEDR DYFEKYGKIETIEVME TIEVMEDRQSGKKRGF K I E D R Q 0 1 0 1 0 0 3 0 0 2 0 0 1 0 0 0 1 0 0 1 0 10 0 1233.5911 E7EWI9;E7ERJ4;P51991-2;P51991 E7EWI9 130 139 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 2 2.4482E-48 141.91 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 3 177730000 0 22575000 93680000 9639700 17713000 34118000 3184 371;955 3220;3221 14106;14107;14108;14109;14110;14111;14112;14113;14114;14115 9350;9351;9352;9353;9354;9355;9356;9357;9358 9352 41 9 IETIEVMEDRQSGK DYFEKYGKIETIEVME MEDRQSGKKRGFAFVT K I E G K K 0 1 0 1 0 1 3 1 0 2 0 1 1 0 0 1 1 0 0 1 0 14 1 1633.7981 E7EWI9;E7ERJ4;P51991-2;P51991 E7EWI9 130 143 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 3 0.0014793 82.069 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 6251500 1151000 0 1056400 945680 538770 2559600 3185 371;955 3222 14116;14117;14118;14119;14120 9359;9360;9361 9359 3 IETIEVMEDRQSGKK DYFEKYGKIETIEVME EDRQSGKKRGFAFVTF K I E K K R 0 1 0 1 0 1 3 1 0 2 0 2 1 0 0 1 1 0 0 1 0 15 2 1761.8931 E7EWI9;E7ERJ4;P51991-2;P51991 E7EWI9 130 144 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 3;4 1.9773E-30 115.24 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 237850000 27154000 28877000 42938000 44265000 50607000 44013000 3186 371;955 3223 14121;14122;14123;14124;14125;14126;14127;14128;14129;14130;14131;14132 9362;9363;9364;9365;9366;9367;9368;9369;9370;9371;9372;9373 9363 12 IEVEKPFAIAKE VIIADCGKIEVEKPFA KPFAIAKE________ K I E K E - 2 0 0 0 0 0 3 0 0 2 0 2 0 1 1 0 0 0 0 1 0 12 2 1372.7602 P23284 P23284 205 216 PPIB Peptidyl-prolyl cis-trans isomerase B yes yes 3 1.9551E-11 108.72 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 16479000 13662000 0 0 0 0 2817500 3187 867 3224 14133;14134 9374;9375 9375 1 IEVIEIMTDRGSGKK ________________ TDRGSGKKRGFAFVTF K I E K K R 0 1 0 1 0 0 2 2 0 3 0 2 1 0 0 1 1 0 0 1 0 15 2 1674.8975 H0YH80;P09651-3;F8VXY0;F8VRQ1;P09651-2;F8W6I7;P09651;F8VSB5;F8W1S7;F8VTQ5;F8VZ49;Q32P51;F8VYN5 H0YH80 2 16 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 3;4 0.00055149 83.877 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 2 1 1 57443000 23697000 2921200 6348800 14073000 3351400 7051400 3188 537 3225 14135;14136;14137;14138;14139;14140;14141;14142 9376;9377;9378;9379;9380;9381;9382 9376 5 IEVLEEELR DLKLKNTKIEVLEEEL EVLEEELRLARDANSE K I E L R L 0 1 0 0 0 0 4 0 0 1 2 0 0 0 0 0 0 0 0 1 0 9 0 1128.6027 P15924;P15924-2;H7BYR0 P15924 1034 1042 DSP Desmoplakin yes no 2 0.036116 61.765 By matching By MS/MS By matching By matching By matching By matching 1 15550000 0 15550000 0 0 0 0 3189 840 3226 14143 9383 9383 1 IEVQDTSGGTTALRPSASTQALSSSVSSSK CFGVLSSRIEVQDTSG SSSVSSSKLFSSSTAP R I E S K L 3 1 0 1 0 2 1 2 0 1 2 1 0 0 1 9 4 0 0 2 0 30 1 2951.4684 B4DZP5;Q16531;F5H581;F5GY55 B4DZP5 426 455 DDB1 DNA damage-binding protein 1 yes no 3 2.3873E-180 137.03 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 61180000 13601000 16299000 10298000 3011200 0 17971000 3190 148 3227 14144;14145;14146;14147;14148 9384;9385;9386;9387;9388 9386 5 IEYAKPTRLNVFK YSGCCTLKIEYAKPTR PTRLNVFKNDQDTWDY K I E F K N 1 1 1 0 0 0 1 0 0 1 1 2 0 1 1 0 1 0 1 1 0 13 2 1577.893 P14866;A6NIT8;B4DPK8;B4DVF8 P14866 265 277 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 3 1.395E-08 102.4 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 60150000 3156900 18698000 21202000 5290100 1093500 10709000 3191 838 3228 14149;14150;14151;14152;14153;14154;14155 9389;9390;9391;9392 9390 4 IEYDCELVPR KFIARAQRIEYDCELV YDCELVPRRVAIFIEK R I E P R R 0 1 0 1 1 0 2 0 0 1 1 0 0 0 1 0 0 0 1 1 0 10 0 1292.6071 Q9P258 Q9P258 301 310 RCC2 Protein RCC2 yes yes 2 1.1378E-23 126.39 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 2 18203000 9184200 7538300 0 1480900 0 0 3192 1575 3229 14156;14157;14158;14159 9393;9394;9395 9395 3 IEYVDETGRK DGYKPDVKIEYVDETG YVDETGRKLTPKEAFR K I E R K L 0 1 0 1 0 0 2 1 0 1 0 1 0 0 0 0 1 0 1 1 0 10 1 1208.6037 O43290;G3V1T2 O43290 710 719 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 3 0.0049386 75.652 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 8284800 702600 1092000 1072100 556580 1931700 2929800 3193 713 3230 14160;14161;14162;14163;14164;14165 9396;9397;9398;9399;9400 9397 5 IFAPNHVVAK TPPLYRMRIFAPNHVV APNHVVAKSRFWYFVS R I F A K S 2 0 1 0 0 0 0 0 1 1 0 1 0 1 1 0 0 0 0 2 0 10 0 1094.6237 B4DM74;Q02543 B4DM74 32 41 RPL18A 60S ribosomal protein L18a yes no 2 0.018075 65.224 By matching By matching By matching By matching By MS/MS By matching 1 2 3608500 0 0 0 827210 2781300 0 3194 104 3231 14166;14167;14168 9401;9402 9401 2 IFDPQNPDENE LFPFTHVKIFDPQNPD PQNPDENE________ K I F N E - 0 0 2 2 0 1 2 0 0 1 0 0 0 1 2 0 0 0 0 0 0 11 0 1316.5521 P46109 P46109 293 303 CRKL Crk-like protein yes yes 2 4.5427E-42 134.98 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 75104000 0 0 17795000 8605400 19710000 28993000 3195 924 3232 14169;14170;14171;14172 9403;9404;9405;9406 9404 4 IFEVNASSQR CAQELGFKIFEVNASS EVNASSQRSGRQILSQ K I F Q R S 1 1 1 0 0 1 1 0 0 1 0 0 0 1 0 2 0 0 0 1 0 10 0 1149.5778 Q96QE3;Q96QE3-2 Q96QE3 1153 1162 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 0.0087186 79.659 By matching By matching By matching By matching By matching By MS/MS 1 1 2 11109000 0 0 947410 0 992800 9169000 3196 1415 3233 14173;14174;14175;14176 9407 9407 1 IFGCSECEK SGSGRGKKIFGCSECE FGCSECEKLFRSPRDL K I F E K L 0 0 0 0 2 0 2 1 0 1 0 1 0 1 0 1 0 0 0 0 0 9 0 1128.458 Q96SL8 Q96SL8 413 421 FIZ1 Flt3-interacting zinc finger protein 1 yes yes 2 0.0064563 91.867 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 7669400 1299900 1972000 0 1306800 0 3090700 3197 1419 3234 14177;14178;14179;14180 9408;9409 9409 2 IFIKPNAQKPLPQALSK SNTPFLPKIFIKPNAQ PLPQALSKERRERPQD K I F S K E 2 0 1 0 0 2 0 0 0 2 2 3 0 1 3 1 0 0 0 0 0 17 2 1892.1248 Q01780;Q01780-2;B4DKG8 Q01780 202 218 EXOSC10 Exosome component 10 yes no 3;4 0.00050142 85.988 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 2 47785000 9788100 3937300 12347000 2105800 2059300 17547000 3198 1030 3235 14181;14182;14183;14184;14185;14186;14187 9410;9411;9412;9413;9414;9415;9416;9417 9417 8 IFLGGSEGTLNDCK TKKELRVKIFLGGSEG EGTLNDCKIISVDEIF K I F C K I 0 0 1 1 1 0 1 3 0 1 2 1 0 1 0 1 1 0 0 0 0 14 0 1509.7133 Q96PU4;Q96PU4-2 Q96PU4 285 298 UHRF2 E3 ubiquitin-protein ligase UHRF2 yes no 2 0.0050752 57.425 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 2748400 0 1563300 0 0 0 1185100 3199 1411 3236 14188;14189;14190 9418;9419 9419 1 IFNRSVNIMHDK NILKPYIKIFNRSVNI SVNIMHDKWQHLASEG K I F D K W 0 1 2 1 0 0 0 0 1 2 0 1 1 1 0 1 0 0 0 1 0 12 1 1472.7558 B4DNA9 B4DNA9 54 65 yes yes 2 0.024086 49.448 By matching By MS/MS By matching By matching By matching By matching 1 89175000 0 89175000 0 0 0 0 3200 109 3237 14191 9420 9420 12 0 IFPVPEEPPVKK GYRPAEDKIFPVPEEP PEEPPVKKLMRTSTPP K I F K K L 0 0 0 0 0 0 2 0 0 1 0 2 0 1 4 0 0 0 0 2 0 12 1 1378.786 O96006 O96006 520 531 ZBED1 Zinc finger BED domain-containing protein 1 yes yes 3 2.659E-27 123.62 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 68725000 0 12220000 27005000 6491000 9468800 13540000 3201 778 3238 14192;14193;14194;14195;14196 9421;9422;9423;9424 9422 4 IFQKAPDGVRK LPSDLQAKIFQKAPDG KAPDGVRKCIVATNIA K I F R K C 1 1 0 1 0 1 0 1 0 1 0 2 0 1 1 0 0 0 0 1 0 11 2 1257.7194 Q92620;B4DVG8 Q92620 790 800 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes no 3 0.0010938 97.597 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 9420500 0 2197200 1937700 619170 1153700 3512600 3202 1356 3239 14197;14198;14199;14200;14201 9425;9426 9425 2 IFQPVIEAPGASK PSGKKKLKIFQPVIEA IEAPGASKCIGPGCCH K I F S K C 2 0 0 0 0 1 1 1 0 2 0 1 0 1 2 1 0 0 0 1 0 13 0 1355.7449 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 384 396 DIDO1 Death-inducer obliterator 1 yes no 2 0.00093701 91.307 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 65060000 0 31804000 0 33255000 0 0 3203 1447 3240 14202;14203 9427;9428;9429 9429 3 IFREDYSITTK EMTDRDWRIFREDYSI EDYSITTKGGKIPNPI R I F T K G 0 1 0 1 0 0 1 0 0 2 0 1 0 1 0 1 2 0 1 0 0 11 1 1371.7034 Q9BUQ8 Q9BUQ8 372 382 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 3 0.0052199 73.632 By matching By matching By matching By matching By matching By MS/MS 1 1 2768500 0 0 0 0 678940 2089600 3204 1452 3241 14204;14205 9430 9430 1 IFRRDSDLTCLQK HSSVPMDKIFRRDSDL SDLTCLQKLLECMRKT K I F Q K L 0 2 0 2 1 1 0 0 0 1 2 1 0 1 0 1 1 0 0 0 0 13 2 1650.8512 Q5VVJ2;Q5VVJ2-2;Q5VVJ2-3 Q5VVJ2 764 776 MYSM1 Histone H2A deubiquitinase MYSM1 yes no 4 0.031237 42.976 By matching By matching By matching By matching By matching By MS/MS 1 1410400 0 0 0 0 0 1410400 3205 1207 3242 14206 9431 9431 1 IFSGSSHQDLSQK ________________ SHQDLSQKIADRLGLE K I F Q K I 0 0 0 1 0 2 0 1 1 1 1 1 0 1 0 4 0 0 0 0 0 13 0 1432.6947 B1ALA7;P60891;P21108 B1ALA7 6 18 PRPS1;PRPS1L1 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 3 yes no 2;3 1.9026E-16 112.64 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 2 1 1 1 2 2 8984600 992090 905760 1576900 853830 1511500 3144400 3206 64 3243 14207;14208;14209;14210;14211;14212;14213;14214;14215 9432;9433;9434;9435;9436 9435 5 IFTGNKFTK IKRMFDERIFTGNKFT FTGNKFTKDTTKLEPA R I F T K D 0 0 1 0 0 0 0 1 0 1 0 2 0 2 0 0 2 0 0 0 0 9 1 1054.5811 Q9UHL9-2;Q9UHL9;E9PFE2;Q9UHL9-3 Q9UHL9-2 431 439 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 yes no 2 0.034089 80.219 By matching By matching By matching By matching By MS/MS By matching 1 558660 0 0 0 0 558660 0 3207 427 3244 14216 9437 9437 1 IFTHHLCR DLLHKTARIFTHHLCR IFTHHLCRARRYCHDL R I F C R A 0 1 0 0 1 0 0 0 2 1 1 0 0 1 0 0 1 0 0 0 0 8 0 1082.5444 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 798 805 MYBBP1A Myb-binding protein 1A yes no 2 0.023129 77.318 By matching By matching By matching By matching By matching By MS/MS 1 580910 0 0 0 0 0 580910 3208 682 3245 14217 9438 9438 1 IFVGGIKEDTEEYNLR GAHLTVKKIFVGGIKE DTEEYNLRDYFEKYGK K I F L R D 0 1 1 1 0 0 3 2 0 2 1 1 0 1 0 0 1 0 1 1 0 16 1 1881.9472 E7EWI9;E7ERJ4;P51991-2;P51991 E7EWI9 106 121 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 3 3.0378E-255 171.11 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 21760000 21760000 0 0 0 0 0 3209 371;955 3246 14218;14219 9439;9440 9439 2 IFVGGIPHNCGETELR SDNSKSNKIFVGGIPH NCGETELREYFKKFGV K I F L R E 0 1 1 0 1 0 2 3 1 2 1 0 0 1 1 0 1 0 0 1 0 16 0 1797.8832 Q96EP5-2;Q96EP5 Q96EP5-2 115 130 DAZAP1 DAZ-associated protein 1 yes no 3 0.00029721 71.781 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 43966000 0 11150000 0 6109500 0 26706000 3210 1382 3247 14220;14221;14222 9441;9442;9443;9444;9445;9446 9443 6 IFVGGIPHNCGETELREYFKK SDNSKSNKIFVGGIPH ELREYFKKFGVVTEVV K I F K K F 0 1 1 0 1 0 3 3 1 2 1 2 0 2 1 0 1 0 1 1 0 21 2 2493.2475 Q96EP5-2;Q96EP5 Q96EP5-2 115 135 DAZAP1 DAZ-associated protein 1 yes no 4 0.0024315 48.288 By matching By matching By matching By matching By matching By MS/MS 1 17577000 0 0 0 0 0 17577000 3211 1382 3248 14223 9447 9447 1 IFVGGLNPEATEEK MKKDPVKKIFVGGLNP NPEATEEKIREYFGEF K I F E K I 1 0 1 0 0 0 3 2 0 1 1 1 0 1 1 0 1 0 0 1 0 14 0 1502.7617 D6R9P3;D6RD18;Q99729-3;D6RBZ0;Q99729-2 D6R9P3 156 169 HNRNPAB yes no 2 0.0060635 54.898 By matching By matching By matching By matching By matching By MS/MS 1 6264700 0 0 0 0 0 6264700 3212 318 3249 14224 9448 9448 1 IFVGGLSPDTPEEK KTKEPVKKIFVGGLSP SPDTPEEKIREYFGGF K I F E K I 0 0 0 1 0 0 2 2 0 1 1 1 0 1 2 1 1 0 0 1 0 14 0 1487.7508 D6RF44;H0YA96;D6RAF8;H0Y8G5;H7BXN2;Q14103-4;B4DTC3;Q14103-3;Q14103-2;Q14103;F5H6R6 D6RF44 86 99 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 yes no 2 0.0031492 60.55 By matching By matching By matching By MS/MS By matching By matching 1 12998000 0 0 0 12998000 0 0 3213 126 3250 14225 9449 9449 1 IFVGTKGIPHLVTHDAR YKLCKVRKIFVGTKGI HLVTHDARTIRYPDPL K I F A R T 1 1 0 1 0 0 0 2 2 2 1 1 0 1 1 0 2 0 0 2 0 17 1 1860.037 P62701 P62701 129 145 RPS4X 40S ribosomal protein S4, X isoform yes yes 4 0.037489 36.451 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 4056900 0 0 0 1159400 0 2897500 3214 993 3251 14226;14227 9450;9451 9450 2 IFVNDDRHVMAK ________________ DDRHVMAKHSSVYPTQ R I F A K H 1 1 1 2 0 0 0 0 1 1 0 1 1 1 0 0 0 0 0 2 0 12 1 1443.7293 Q12906-5;Q12906-4;Q12906-2;Q12906-6;Q12906-3;C9JFV5;Q12906;G5E9M5;B4DFG4 Q12906-5 6 17 ILF3 Interleukin enhancer-binding factor 3 yes no 3 0.0057656 63.694 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 12963000 658860 3003700 2194900 1205300 5900600 0 3215 243 3252 14228;14229;14230;14231;14232 9452;9453 9452 2 IFYIDRNASK GFSTAPNKIFYIDRNA YIDRNASKSVKLED__ K I F S K S 1 1 1 1 0 0 0 0 0 2 0 1 0 1 0 1 0 0 1 0 0 10 1 1225.6455 Q1ED39;H3BNU8 Q1ED39 443 452 KNOP1 Lysine-rich nucleolar protein 1 yes no 3 0.0035075 89.047 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 42918000 8704400 5858400 4698100 5244900 10441000 7971300 3216 1157 3253 14233;14234;14235;14236;14237;14238;14239 9454;9455;9456;9457;9458;9459 9459 6 IFYPETTDIYDRK MDEIGLPKIFYPETTD TTDIYDRKNMPRCIYC K I F R K N 0 1 0 2 0 0 1 0 0 2 0 1 0 1 1 0 2 0 2 0 0 13 1 1659.8144 P46940 P46940 131 143 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 3 0.00030728 92.781 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 18157000 4864700 8467600 0 0 4824600 0 3217 929 3254 14240;14241;14242 9460;9461;9462 9461 3 IGAVNCGDDR KEVDGLLRIGAVNCGD AVNCGDDRMLCRMKGV R I G D R M 1 1 1 2 1 0 0 2 0 1 0 0 0 0 0 0 0 0 0 1 0 10 0 1075.4717 Q8IXB1;Q8IXB1-2;F8W884;Q3B7W8;E7EP04 Q8IXB1 181 190 DNAJC10 DnaJ homolog subfamily C member 10 yes no 2 0.0064573 85.533 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 6204000 803450 3894300 0 441900 0 1064400 3218 1287 3255 14243;14244;14245;14246 9463 9463 1 IGAVNCGDDRMLCR KEVDGLLRIGAVNCGD GDDRMLCRMKGVNSYP R I G C R M 1 2 1 2 2 0 0 2 0 1 1 0 1 0 0 0 0 0 0 1 0 14 1 1635.728 Q8IXB1;Q8IXB1-2;F8W884;Q3B7W8;E7EP04 Q8IXB1 181 194 DNAJC10 DnaJ homolog subfamily C member 10 yes no 3 0.0027311 62.694 By matching By MS/MS By matching By matching By matching By matching 1 6494700 0 6494700 0 0 0 0 3219 1287 3256 14247 9464;9465 9464 2 IGCVWAADRDCAGDDLK FRVLQPVKIGCVWAAD DCAGDDLKVLQQFAAH K I G L K V 3 1 0 4 2 0 0 2 0 1 1 1 0 0 0 0 0 1 0 1 0 17 1 1920.8458 Q13111-2;C9JLF8;Q13111-3;Q13111 Q13111-2 686 702 CHAF1A Chromatin assembly factor 1 subunit A yes no 3 0.0018446 57.288 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2748100 0 763130 0 167160 0 1817800 3220 258 3257 14248;14249;14250 9466 9466 1 IGDFGLTK VESEHQVKIGDFGLTK IGDFGLTKAIETDKEY K I G T K A 0 0 0 1 0 0 0 2 0 1 1 1 0 1 0 0 1 0 0 0 0 8 0 849.45962 P23458;F5H5U8;O60674 P23458 1019 1026 JAK1;JAK2 Tyrosine-protein kinase JAK1;Tyrosine-protein kinase;Tyrosine-protein kinase JAK2 yes no 2 0.035301 69.598 By matching By MS/MS By matching By matching By matching By matching 1 1 2549200 0 1009500 0 0 0 1539700 3221 868 3258 14251;14252 9467 9467 1 IGDWLQER KEGHLVCRIGDWLQER IGDWLQERYEIVGNLG R I G E R Y 0 1 0 1 0 1 1 1 0 1 1 0 0 0 0 0 0 1 0 0 0 8 0 1015.5087 P49761-1;P49761;H3BUL5;H3BVF8;H3BQG1;P49761-3;G5E959 P49761-1 148 155 CLK3 Dual specificity protein kinase CLK3 yes no 2 0.0079665 104.01 By MS/MS By matching By matching By matching By matching By matching 1 5032900 5032900 0 0 0 0 0 3222 944 3259 14253 9468 9468 1 IGEEEIQKPEEK EETAIGKKIGEEEIQK EIQKPEEKVTWDGHSG K I G E K V 0 0 0 0 0 1 5 1 0 2 0 2 0 0 1 0 0 0 0 0 0 12 1 1427.7144 Q15459;F5H048;E9PAW1 Q15459 488 499 SF3A1 Splicing factor 3A subunit 1 yes no 3 0.0033275 71.153 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 4620000 538920 983020 771830 613170 672950 1040100 3223 1138 3260 14254;14255;14256;14257;14258;14259 9469;9470;9471;9472 9470 4 IGEEQSAEDAEDGPPELLFIHGGHTAK LNVWDLSKIGEEQSAE IHGGHTAKISDFSWNP K I G A K I 3 0 0 2 0 1 5 4 2 2 2 1 0 1 2 1 1 0 0 0 0 27 0 2846.3359 Q16576;E9PC52;Q16576-2;Q5JNZ6 Q16576 349 375 RBBP7 Histone-binding protein RBBP7 yes no 4 7.2825E-117 125.98 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 569220000 0 0 0 63391000 0 505830000 3224 1153 3261 14260;14261 9473;9474;9475 9474 3 IGEEQSPEDAEDGPPELLFIHGGHTAK LNVWDLSKIGEEQSPE IHGGHTAKISDFSWNP K I G A K I 2 0 0 2 0 1 5 4 2 2 2 1 0 1 3 1 1 0 0 0 0 27 0 2872.3515 Q09028-3;Q09028;Q09028-2;Q09028-4;H0YCT5;H0YF10;H0YDK2;H0YEU5;B4DRT0 Q09028-3 350 376 RBBP4 Histone-binding protein RBBP4 yes no 3;4 0 193.73 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 2 1124900000 0 76637000 302720000 73658000 0 671860000 3225 1051 3262 14262;14263;14264;14265;14266 9476;9477;9478;9479;9480 9480 5 IGEGTYGTVFKAK QKYEKLEKIGEGTYGT YGTVFKAKNRETHEIV K I G A K N 1 0 0 0 0 0 1 3 0 1 0 2 0 1 0 0 2 0 1 1 0 13 1 1369.7242 Q00535-2;Q00535 Q00535-2 10 22 CDK5 Cyclin-dependent kinase 5 yes no 3 0.0022763 66.326 By matching By matching By MS/MS By matching By matching By matching 1 1 1483300 0 0 917710 565570 0 0 3226 1020 3263 14267;14268 9481 9481 1 IGEGTYGVVYK ENFQKVEKIGEGTYGV GTYGVVYKARNKLTGE K I G Y K A 0 0 0 0 0 0 1 3 0 1 0 1 0 0 0 0 1 0 2 2 0 11 0 1184.6077 P06493;P06493-2;E5RIU6;Q00526;P24941-2;P24941;G3V5T9;E7ESI2;G3V317 P24941-2 10 20 CDK1;CDK3;CDK2 Cyclin-dependent kinase 1;Cyclin-dependent kinase 3;Cyclin-dependent kinase 2 no no 2 3.4112E-05 102.53 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 20398000 0 0 3063600 1493600 4546000 11295000 3227 589;799 3264 14269;14270;14271;14272 9482 9482 1 IGEGTYGVVYKAR ENFQKVEKIGEGTYGV YGVVYKARNKLTGEVV K I G A R N 1 1 0 0 0 0 1 3 0 1 0 1 0 0 0 0 1 0 2 2 0 13 1 1411.746 P24941-2;P24941;G3V5T9;E7ESI2;G3V317 P24941-2 10 22 CDK2 Cyclin-dependent kinase 2 yes no 2;3 0.0020797 88.163 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 2 2 2 100070000 13096000 12721000 16551000 10874000 15323000 31501000 3228 589 3265 14273;14274;14275;14276;14277;14278;14279;14280;14281;14282;14283 9483;9484;9485;9486;9487;9488;9489 9486 7 IGEGTYGVVYKGR EDYTKIEKIGEGTYGV YGVVYKGRHKTTGQVV K I G G R H 0 1 0 0 0 0 1 4 0 1 0 1 0 0 0 0 1 0 2 2 0 13 1 1397.7303 P06493;P06493-2;E5RIU6 P06493 10 22 CDK1 Cyclin-dependent kinase 1 yes no 3 0.0022751 70.728 By matching By MS/MS By matching By matching By matching By matching 1 889700 0 889700 0 0 0 0 3229 799 3266 14284 9490 9490 1 IGEVDVEQHTLAK HFLRRASKIGEVDVEQ VEQHTLAKYLMELTML K I G A K Y 1 0 0 1 0 1 2 1 1 1 1 1 0 0 0 0 1 0 0 2 0 13 0 1437.7464 E9PC90;P14635;Q5TZP9;H0YA62 E9PC90 312 324 CCNB1 G2/mitotic-specific cyclin-B1 yes no 2;3 6.5224E-60 132.86 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 126890000 20298000 15866000 17785000 9622400 19729000 43585000 3230 413 3267 14285;14286;14287;14288;14289;14290;14291;14292;14293;14294;14295;14296;14297 9491;9492;9493;9494;9495;9496;9497;9498;9499 9494 8 IGGASSRGENSYGLETVCK GVINRVEKIGGASSRG YGLETVCKDIRNLRFA K I G C K D 1 1 1 0 1 0 2 4 0 1 1 1 0 0 0 3 1 0 1 1 0 19 1 1983.932 F5H545;C9JEX3;A6NN98;Q13614 F5H545 121 139 MTMR2 Myotubularin-related protein 2 yes no 3 0.008343 42.633 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 4297800 0 753810 1073900 495240 1211600 763300 3231 31 3268 14298;14299;14300;14301;14302 9500 9500 1 IGGDAATTVNNSTPDFGFGGQK RARQIAAKIGGDAATT DFGFGGQKRQLEDGDQ K I G Q K R 2 0 2 2 0 1 0 5 0 1 0 1 0 2 1 1 3 0 0 1 0 22 0 2153.0025 Q92945-2;Q92945;E7EP96 Q92945-2 88 109 KHSRP Far upstream element-binding protein 2 yes no 2;3 0 267.69 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 4 2 4 3 6448700000 1351000000 2318700000 683150000 818960000 1047400000 229420000 3232 1366 3269 14303;14304;14305;14306;14307;14308;14309;14310;14311;14312;14313;14314;14315;14316;14317;14318;14319 9501;9502;9503;9504;9505;9506;9507;9508;9509;9510;9511;9512;9513;9514 9501 13 IGGDAATTVNNSTPDFGFGGQKR RARQIAAKIGGDAATT FGFGGQKRQLEDGDQP K I G K R Q 2 1 2 2 0 1 0 5 0 1 0 1 0 2 1 1 3 0 0 1 0 23 1 2309.1036 Q92945-2;Q92945;E7EP96 Q92945-2 88 110 KHSRP Far upstream element-binding protein 2 yes no 3 0 186.45 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 213430000 0 70843000 50535000 31390000 8168900 52490000 3233 1366 3270 14320;14321;14322;14323;14324 9515;9516;9517;9518;9519;9520;9521 9516 7 IGGGIDVPVPR DRNEYGSRIGGGIDVP GIDVPVPRHSVGVVIG R I G P R H 0 1 0 1 0 0 0 3 0 2 0 0 0 0 2 0 0 0 0 2 0 11 0 1078.6135 Q92945-2;Q92945;E7EP96 Q92945-2 321 331 KHSRP Far upstream element-binding protein 2 yes no 2 4.2123E-179 178.54 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1111200000 197300000 248720000 144560000 59818000 127010000 333760000 3234 1366 3271 14325;14326;14327;14328;14329;14330;14331 9522;9523;9524;9525;9526;9527 9524 6 IGGGIDVPVPRHSVGVVIGR DRNEYGSRIGGGIDVP SVGVVIGRSGEMIKKI R I G G R S 0 2 0 1 0 0 0 5 1 3 0 0 0 0 2 1 0 0 0 5 0 20 1 1983.1378 Q92945-2;Q92945;E7EP96 Q92945-2 321 340 KHSRP Far upstream element-binding protein 2 yes no 3;4 4.2674E-18 99.663 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 2 2 1152400000 124540000 105250000 224860000 85270000 22876000 589630000 3235 1366 3272 14332;14333;14334;14335;14336;14337;14338;14339;14340;14341 9528;9529;9530;9531;9532;9533;9534;9535;9536 9530 9 IGGIGTVPVGR LPLQDVYKIGGIGTVP IGTVPVGRVETGVLKP K I G G R V 0 1 0 0 0 0 0 4 0 2 0 0 0 0 1 0 1 0 0 2 0 11 0 1024.6029 Q5VTE0;P68104;Q6IQ15;Q05639 Q5VTE0 256 266 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2 1.4795E-20 123.79 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 5 1 232410000 19926000 31450000 14113000 11261000 80505000 75157000 3236 1006 3273 14342;14343;14344;14345;14346;14347;14348;14349;14350;14351;14352;14353 9537;9538;9539;9540;9541;9542;9543;9544;9545 9540 7 IGHPAPNFK ________________ GHPAPNFKATAVMPDG K I G F K A 1 0 1 0 0 0 0 1 1 1 0 1 0 1 2 0 0 0 0 0 0 9 0 979.52395 Q06830 Q06830 8 16 PRDX1 Peroxiredoxin-1 yes yes 2 0.0061789 104.06 By MS/MS By matching By matching By matching By MS/MS By MS/MS 2 1 1 1 2 1 349060000 41781000 51674000 51196000 24108000 117490000 62815000 3237 1044 3274 14354;14355;14356;14357;14358;14359;14360;14361 9546;9547;9548;9549 9547 4 IGHRSVDSSGETTYKK ASGMPIKKIGHRSVDS SGETTYKKTTSSALKG K I G K K T 0 1 0 1 0 0 1 2 1 1 0 2 0 0 0 3 2 0 1 1 0 16 2 1763.8802 Q99755-2;Q99755-3;A6PW57;Q99755;Q99755-4;A6PW58;A2A5X0 Q99755-2 51 66 PIP5K1A Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha yes no 4 0.0024919 55.66 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 5332900 0 776700 1596200 1307700 549720 1102600 3238 32 3275 14362;14363;14364;14365;14366 9550;9551;9552 9552 3 IGHRYIEIFK ALKKHKERIGHRYIEI HRYIEIFKSSRAEVRT R I G F K S 0 1 0 0 0 0 1 1 1 3 0 1 0 1 0 0 0 0 1 0 0 10 1 1274.7135 D6RBM0;E9PCY7;P31943;G8JLB6;E5RGV0;E7EN40;H0YB39;P55795;B4DFK9 D6RBM0 176 185 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H2, N-terminally processed no no 2;3 1.4742E-14 119.22 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 2 2 202990000 13370000 5955100 33582000 14380000 52533000 83170000 3239 322;970 3276 14367;14368;14369;14370;14371;14372;14373;14374;14375 9553;9554;9555;9556;9557;9558;9559;9560 9556 8 IGHRYIEVFK ALGKHKERIGHRYIEV HRYIEVFKSSQEEVRS R I G F K S 0 1 0 0 0 0 1 1 1 2 0 1 0 1 0 0 0 0 1 1 0 10 1 1260.6979 P52597;B4DKS8 P52597 176 185 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 2;3 0.0089035 79.489 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 114350000 0 7671700 18332000 9035400 22340000 56970000 3240 958 3277 14376;14377;14378;14379;14380;14381 9561;9562;9563;9564;9565;9566 9564 6 IGIDIDHTQSYRK HSVNTEEKIGIDIDHT DHTQSYRKQMEQSRRK K I G R K Q 0 1 0 2 0 1 0 1 1 3 0 1 0 0 0 1 1 0 1 0 0 13 1 1544.7947 Q96T58 Q96T58 1159 1171 SPEN Msx2-interacting protein yes yes 3 0.0096764 49.356 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 5314500 0 1713300 835620 578420 917180 1270000 3241 1422 3278 14382;14383;14384;14385;14386 9567;9568 9567 2 IGLETVGVKINEK GRDACTRKIGLETVGV VGVKINEKTGKIPVTD K I G E K T 0 0 1 0 0 0 2 2 0 2 1 2 0 0 0 0 1 0 0 2 0 13 1 1398.8082 E9PRI8;F5H780;E9PMY9;E9PIR7;B2R5P6;Q16881-5;E2QRB9;Q16881-2;B7Z2S5;Q16881-4;E9PNQ6;E7ESI6;Q16881-3;E7EW10;Q16881-6;Q16881 E9PRI8 13 25 TXNRD1 Thioredoxin reductase 1, cytoplasmic yes no 3 3.1284E-15 107.53 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 6913500 0 2842500 0 4071000 0 0 3242 67 3279 14387;14388 9569;9570 9570 2 IGLGGRGGSGGSYGR FESSGAGKIGLGGRGG GSGGSYGRGSRGGSGG K I G G R G 0 2 0 0 0 0 0 8 0 1 1 0 0 0 0 2 0 0 1 0 0 15 1 1349.68 P35527;CON__P35527 P35527 473 487 KRT9 Keratin, type I cytoskeletal 9 yes no 3 0.0025809 61.423 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 101950000 10253000 20465000 34349000 17353000 18880000 646990 + 3243 899 3280 14389;14390;14391;14392;14393;14394 9571;9572 9571 2 IGLLSASSK LVLEEKLKIGLLSASS GLLSASSKNKEKLIKD K I G S K N 1 0 0 0 0 0 0 1 0 1 2 1 0 0 0 3 0 0 0 0 0 9 0 874.51238 Q56NI9;E5RFE4 Q56NI9 272 280 ESCO2 N-acetyltransferase ESCO2 yes no 2 0.010339 101.46 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5375800 0 0 266550 0 1003900 4105300 3244 1176 3281 14395;14396;14397 9573 9573 1 IGLLSASSKNKEK LVLEEKLKIGLLSASS ASSKNKEKLIKDSSDD K I G E K L 1 0 1 0 0 0 1 1 0 1 2 3 0 0 0 3 0 0 0 0 0 13 2 1373.7878 Q56NI9;E5RFE4 Q56NI9 272 284 ESCO2 N-acetyltransferase ESCO2 yes no 3 0.0044402 79.283 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 11752000 1256600 2587000 3162900 0 1780300 2964700 3245 1176 3282 14398;14399;14400;14401;14402 9574;9575;9576 9574 3 IGLSDARLK QRFDARQKIGLSDARL GLSDARLKLGVKDARE K I G L K L 1 1 0 1 0 0 0 1 0 1 2 1 0 0 0 1 0 0 0 0 0 9 1 971.57638 Q9BY77;Q9BY77-2;F8WCX5;B4DSH9;Q6R954;F8WEE2 Q9BY77 60 68 POLDIP3;PDIP46 Polymerase delta-interacting protein 3 yes no 2 0.016783 96.034 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 4804700 1349300 893690 943410 1082900 535420 0 3246 1465 3283 14403;14404;14405;14406;14407 9577 9577 1 IGLVEDLNKGAKPVVVLQK EPKDKVEKIGLVEDLN KPVVVLQKLSLDDVQK K I G Q K L 1 0 1 1 0 1 1 2 0 1 3 3 0 0 1 0 0 0 0 4 0 19 2 2019.2092 Q6KC79-2;Q6KC79;Q6KC79-3 Q6KC79-2 989 1007 NIPBL Nipped-B-like protein yes no 3;4 4.935E-06 87.99 By matching By matching By matching By MS/MS By matching By MS/MS 1 2 1 30984000 0 6135100 0 15507000 0 9342400 3247 1222 3284 14408;14409;14410;14411 9578;9579;9580;9581 9579 4 IGPLGLSPK ATSALAPKIGPLGLSP GPLGLSPKKVGDDIAK K I G P K K 0 0 0 0 0 0 0 2 0 1 2 1 0 0 2 1 0 0 0 0 0 9 0 880.5382 P30050 P30050 32 40 RPL12 60S ribosomal protein L12 yes yes 2 0.021781 68.846 By matching By matching By matching By matching By matching By MS/MS 1 573460 0 0 0 0 0 573460 3248 887 3285 14412 9582 9582 1 IGQGTFGEVFKAR SKYEKLAKIGQGTFGE FGEVFKARHRKTGQKV K I G A R H 1 1 0 0 0 1 1 3 0 1 0 1 0 2 0 0 1 0 0 1 0 13 1 1408.7463 P50750;P50750-2 P50750 25 37 CDK9 Cyclin-dependent kinase 9 yes no 3 1.6624E-35 124.6 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 29964000 0 7296000 0 5571900 0 17096000 3249 949 3286 14413;14414;14415 9583;9584;9585 9584 3 IGQGYLIK EINKKIYKIGQGYLIK IGQGYLIKDGKLIKNN K I G I K D 0 0 0 0 0 1 0 2 0 2 1 1 0 0 0 0 0 0 1 0 0 8 0 890.52255 P39023;G5E9G0;B5MCW2 P39023 287 294 RPL3 60S ribosomal protein L3 yes no 2 7.0072E-25 133.81 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 39606000 5846100 3184200 2742300 5717800 12758000 9357800 3250 905 3287 14416;14417;14418;14419;14420;14421 9586;9587 9587 2 IGQGYLIKDGK EINKKIYKIGQGYLIK GYLIKDGKLIKNNAST K I G G K L 0 0 0 1 0 1 0 3 0 2 1 2 0 0 0 0 0 0 1 0 0 11 1 1190.6659 P39023;G5E9G0;B5MCW2 P39023 287 297 RPL3 60S ribosomal protein L3 yes no 2 0.029864 63.091 By MS/MS By matching By matching By matching By MS/MS By matching 2 1 1 1 1 1 7213300 1926700 571900 606840 1025400 2077100 1005400 3251 905 3288 14422;14423;14424;14425;14426;14427;14428 9588;9589 9588 2 IGQQPQQPGAPPQQDYTK AWEEYYKKIGQQPQQP PPQQDYTKAWEEYYKK K I G T K A 1 0 0 1 0 6 0 2 0 1 0 1 0 0 4 0 1 0 1 0 0 18 0 1979.9701 Q92945-2;Q92945 Q92945-2 629 646 KHSRP Far upstream element-binding protein 2 yes no 2;3 5.7363E-132 145.79 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 4 2 1 4 4 1163300000 211680000 197130000 254090000 69517000 198460000 232390000 3252 1366 3289 14429;14430;14431;14432;14433;14434;14435;14436;14437;14438;14439;14440;14441;14442;14443;14444;14445;14446 9590;9591;9592;9593;9594;9595;9596;9597;9598;9599;9600;9601;9602;9603;9604;9605;9606;9607;9608;9609;9610;9611 9596 21 IGQQVDREPGDVATPPRK RLCKQLEKIGQQVDRE DVATPPRKRKKIVVEA K I G R K R 1 2 0 2 0 2 1 2 0 1 0 1 0 0 3 0 1 0 0 2 0 18 2 1962.0283 Q9Y5N6;H3BT22 Q9Y5N6 182 199 ORC6 Origin recognition complex subunit 6 yes no 4 0.0061359 44.998 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 9696400 1796300 0 0 2714300 2329600 2856100 3253 1655 3290 14447;14448;14449;14450 9612 9612 1 IGRNGTLTFGDVDTSDEK YTYKKQVKIGRNGTLT DVDTSDEKSAQEEVEV K I G E K S 0 1 1 3 0 0 1 3 0 1 1 1 0 1 0 1 3 0 0 1 0 18 1 1923.9174 Q6PJG2;F6RU81 Q6PJG2 880 897 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 3 2.664E-08 92.679 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 20495000 645500 3023100 9597900 0 2226400 5002500 3254 1231 3291 14451;14452;14453;14454;14455 9613;9614;9615;9616;9617 9613 5 IGSFAEPSSVSFSSK SRELNVSKIGSFAEPS SSVSFSSKEALSFPHL K I G S K E 1 0 0 0 0 0 1 1 0 1 0 1 0 2 1 6 0 0 0 1 0 15 0 1528.7409 Q03164-2;Q03164;E9PQG7 Q03164-2 2310 2324 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 2 0.018938 43.05 By matching By matching By MS/MS By matching By matching By matching 1 1 15865000 0 0 4044600 0 11820000 0 3255 464 3292 14456;14457 9618 9618 1 IGSNGVEMAAKFPSGSQR GMGFHAPKIGSNGVEM KFPSGSQRARVVNTDH K I G Q R A 2 1 1 0 0 1 1 3 0 1 0 1 1 1 1 3 0 0 0 1 0 18 1 1834.8996 Q6IQ49-2;C9JIQ2;Q6IQ49;Q6IQ49-3 Q6IQ49-2 239 256 SDE2 Protein SDE2 homolog yes no 3 0.0018247 55.322 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 21196000 3034100 3129600 0 1997600 5016900 8017900 3256 249 3293 14458;14459;14460;14461;14462 9619;9620;9621;9622 9622 4 IGSTENISNTKEPSEK LNRETGKKIGSTENIS NTKEPSEKLESTSSKV K I G E K L 0 0 2 0 0 0 3 1 0 2 0 2 0 0 1 3 2 0 0 0 0 16 1 1732.8479 Q7Z6E9;Q7Z6E9-2 Q7Z6E9 1219 1234 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 3 3.842E-38 118.2 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 1 1 1 1 1 15503000 3921800 1829700 2303200 2081500 2856900 2509400 3257 1255 3294 14463;14464;14465;14466;14467;14468;14469 9623;9624;9625;9626 9624 4 IGVMSLIRK SRQHVLTRIGVMSLIR GVMSLIRKKVQEFEHV R I G R K K 0 1 0 0 0 0 0 1 0 2 1 1 1 0 0 1 0 0 0 1 0 9 1 1015.6212 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1470 1478 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 4.6555E-06 116.37 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 15502000 0 6584300 0 0 0 8917700 3258 486 3295 14470;14471 9627;9628 9628 2 IGYSHENVSVIPNCQFR DNGAYNAKIGYSHENV VIPNCQFRSKTARLKT K I G F R S 0 1 2 0 1 1 1 1 1 2 0 0 0 1 1 2 0 0 1 2 0 17 0 2018.9632 F8VP72;F8W043;F8W0Q1;F8W057;Q9GZN1 F8VP72 15 31 ACTR6 Actin-related protein 6 yes no 3 0.0022011 67.646 By matching By matching By matching By matching By matching By MS/MS 1 1 5660800 0 0 0 1152000 0 4508800 3259 534 3296 14472;14473 9629 9629 1 IHAAQKPYRCPACGK SSLTCHQRIHAAQKPY YRCPACGKGFTQLSSY R I H G K G 3 1 0 0 2 1 0 1 1 1 0 2 0 0 2 0 0 0 1 0 0 15 2 1755.8661 Q96K58;C9JHH8 Q96K58 245 259 ZNF668 Zinc finger protein 668 yes no 4 0.033305 38.445 By matching By matching By matching By matching By MS/MS By matching 1 1 1189800 0 0 0 0 617920 571890 3260 1401 3297 14474;14475 9630 9630 1 IHAFVQDTTLSEPRQAEIRK LQIKALAKIHAFVQDT PRQAEIRKECLRLWGI K I H R K E 2 2 0 1 0 2 2 0 1 2 1 1 0 1 1 1 2 0 0 1 0 20 2 2338.2393 Q8N1G2 Q8N1G2 514 533 FTSJD2 Cap-specific mRNA (nucleoside-2-O-)-methyltransferase 1 yes yes 4 0.0053098 44.662 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 9108600 1117800 1225500 2372600 1503600 2889200 0 3261 1294 3298 14476;14477;14478;14479;14480 9631;9632 9632 2 IHALTSENTNLKK KCGEDQEKIHALTSEN SENTNLKKMMSNQYVP K I H K K M 1 0 2 0 0 0 1 0 1 1 2 2 0 0 0 1 2 0 0 0 0 13 1 1467.8045 F5H2B9;H0YNH8;G3XAG2;Q9BZF9 F5H2B9 732 744 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes no 3 0.006774 52.79 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2433200 371190 0 0 0 1055800 1006200 3262 512 3299 14481;14482;14483 9633;9634 9633 2 IHETQPLLNLK ________________ TQPLLNLKLDRVMQDI K I H L K L 0 0 1 0 0 1 1 0 1 1 3 1 0 0 1 0 1 0 0 0 0 11 0 1304.7452 Q9BSM1-3;Q9BSM1 Q9BSM1-3 6 16 PCGF1 Polycomb group RING finger protein 1 yes no 3 0.018752 69.721 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 3263 1445 3300 14484 9635 9635 1 IHFFLSK QKLCEIERIHFFLSKK RIHFFLSKKKTDELRN R I H S K K 0 0 0 0 0 0 0 0 1 1 1 1 0 2 0 1 0 0 0 0 0 7 0 890.50142 P35659;P35659-2;B4DFG0;D6R9L5;D6RDA2 P35659 94 100 DEK Protein DEK yes no 2 5.4074E-45 148.33 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 1 176320000 54792000 8133900 24590000 0 32248000 56556000 3264 901 3301 14485;14486;14487;14488;14489;14490 9636;9637;9638;9639 9638 4 IHFPLATYAPVISAEK TNLVPYPRIHFPLATY APVISAEKAYHEQLSV R I H E K A 3 0 0 0 0 0 1 0 1 2 1 1 0 1 2 1 1 0 1 1 0 16 0 1755.956 G3V1U9;Q9BQE3;Q71U36;P68363;F5H5D3;F8VXZ4;Q6PEY2;Q13748;E9PGK3;Q13748-2;F8VVB9;C9JDS9;A8MUB1;P68366 G3V1U9 230 245 TUBA1A;TUBA1C;TUBA1B;TUBA3E;TUBA3C;TUBA4A Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain;Tubulin alpha-4A chain no no 3 0.026555 59.884 By matching By MS/MS By matching By matching By matching By matching 1 30236000 0 30236000 0 0 0 0 3265 518;44 3302 14491 9640 9640 0 IHGYVDEVMTR HDRHADLRIHGYVDEV YVDEVMTRLMKHLGLE R I H T R L 0 1 0 1 0 0 1 1 1 1 0 0 1 0 0 0 1 0 1 2 0 11 0 1318.634 Q8N6T7-4;Q8N6T7-2;Q8N6T7;B4DDV3 Q8N6T7-4 185 195 SIRT6 NAD-dependent protein deacetylase sirtuin-6 yes no 3 0.016783 55.721 By matching By matching By matching By matching By matching By MS/MS 1 1 3005500 0 0 0 0 553010 2452500 3266 1306 3303 14492;14493 9641 9641 1 IHNGEKPYTCNECGK SYLLIHQRIHNGEKPY YTCNECGKAFRQRSSL R I H G K A 0 0 2 0 2 0 2 2 1 1 0 2 0 0 1 0 1 0 1 0 0 15 1 1805.7825 P13682;B4DUB8 P13682 467 481 ZNF35 Zinc finger protein 35 yes no 3 0.0051944 52.966 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 5307400 761160 962450 1399900 530340 602690 1050900 3267 835 3304 14494;14495;14496;14497;14498;14499 9642;9643;9644 9644 3 IHNVGSPLK DLERLLSKIHNVGSPL HNVGSPLKSQNHPDSR K I H L K S 0 0 1 0 0 0 0 1 1 1 1 1 0 0 1 1 0 0 0 1 0 9 0 963.55016 P52701;B4DF41;F5H2F9;F5H769;P52701-2 P52701 825 833 MSH6 DNA mismatch repair protein Msh6 yes no 2 0.010101 100.25 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1252000 0 344000 188700 0 0 719280 3268 959 3305 14500;14501;14502 9645;9646 9645 2 IHQEGDALPGHSKPSR GKVKKKKKIHQEGDAL PGHSKPSRSMESSPRK K I H S R S 1 1 0 1 0 1 1 2 2 1 1 1 0 0 2 2 0 0 0 0 0 16 1 1727.8703 Q1ED39;H3BPL4 Q1ED39 218 233 KNOP1 Lysine-rich nucleolar protein 1 yes no 3;4 0.00027145 71.286 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 2 2 35367000 2421200 4223600 2951500 3237100 10232000 12301000 3269 1157 3306 14503;14504;14505;14506;14507;14508;14509;14510;14511;14512;14513;14514 9647;9648;9649;9650;9651;9652;9653 9650 7 IHQIEYAMEAVK TVWSPQGRIHQIEYAM EYAMEAVKQGSATVGL R I H V K Q 2 0 0 0 0 1 2 0 1 2 0 1 1 0 0 0 0 0 1 1 0 12 0 1430.7228 P25786;P25786-2;B4DEV8 P25786 19 30 PSMA1 Proteasome subunit alpha type-1;Proteasome subunit alpha type yes no 3 0.0024165 72.705 By matching By matching By matching By matching By matching By MS/MS 1 1 2808000 0 918330 0 0 0 1889700 3270 876 3307 14515;14516 9654 9654 1 IHRGERPYICADCGK SNLINHQRIHRGERPY YICADCGKSFIMSSTL R I H G K S 1 2 0 1 2 0 1 2 1 2 0 1 0 0 1 0 0 0 1 0 0 15 2 1830.8618 Q9UEG4 Q9UEG4 423 437 ZNF629 Zinc finger protein 629 yes yes 4 0.033776 38.337 By matching By matching By matching By matching By matching By MS/MS 1 2403200 0 0 0 0 0 2403200 3271 1586 3308 14517 9655 9655 1 IHSDCAANQQVTYR SKRNPIAKIHSDCAAN ANQQVTYRISGVGIDQ K I H Y R I 2 1 1 1 1 2 0 0 1 1 0 0 0 0 0 1 1 0 1 1 0 14 0 1661.758 Q02413 Q02413 73 86 DSG1 Desmoglein-1 yes yes 3 0.00092187 74.789 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 11978000 644490 1960500 2563300 3730300 1886000 1193500 3272 1033 3309 14518;14519;14520;14521;14522;14523 9656;9657;9658;9659;9660 9659 5 IHSGAKPYSCNFCEK SYLAQHIRIHSGAKPY YSCNFCEKSFRQLSHL R I H E K S 1 0 1 0 2 0 1 1 1 1 0 2 0 1 1 2 0 0 1 0 0 15 1 1796.7974 Q8TF68-3;F8W6Q3;Q8TF68-2;Q8TF68;E9PHB3;F5H8L7 Q8TF68-3 222 236 ZNF384 Zinc finger protein 384 yes no 3;4 0.0016668 68.277 By MS/MS By matching By matching By MS/MS By matching By matching 3 1 1 2 2 2 37030000 7206400 999560 1422600 3814600 12470000 11117000 3273 555 3310 14524;14525;14526;14527;14528;14529;14530;14531;14532;14533;14534 9661;9662;9663;9664;9665 9664 5 IHSGDLPYVCNECGK SCLIVHQRIHSGDLPY YVCNECGKAFTCSSYL R I H G K A 0 0 1 1 2 0 1 2 1 1 1 1 0 0 1 1 0 0 1 1 0 15 0 1747.7658 P13682;B4DUB8 P13682 439 453 ZNF35 Zinc finger protein 35 yes no 3 0.0025311 57.788 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 6878600 1063500 1780400 986890 0 3047900 0 3274 835 3311 14535;14536;14537;14538 9666;9667;9668 9666 3 IHSGEKPYECNECGK SNLILHQRIHSGEKPY YECNECGKAFSQSSDL R I H G K A 0 0 1 0 2 0 3 2 1 1 0 2 0 0 1 1 0 0 1 0 0 15 1 1806.7665 B3KRF7;E9PC66;P17029 B3KRF7 241 255 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 no no 3 0.0055448 52.5 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 3462700 0 558390 884170 160240 430360 1429500 3275 74 3312 14539;14540;14541;14542;14543 9669;9670 9670 2 IHSGEKPYGCVECGK SALILHQRIHSGEKPY YGCVECGKAFSRSSIL R I H G K A 0 0 0 0 2 0 2 3 1 1 0 2 0 0 1 1 0 0 1 1 0 15 1 1719.7709 P17028 P17028 272 286 ZNF24 Zinc finger protein 24 yes yes 3;4 2.0046E-08 97.273 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2 1 21599000 1525000 2893700 2627200 745830 5204500 8603300 3276 844 3313 14544;14545;14546;14547;14548;14549;14550 9671;9672;9673;9674;9675 9673 5 IHTAEKPYDCSECGK SHLIVHQRIHTAEKPY YDCSECGKAFSQLSCL R I H G K A 1 0 0 1 2 0 2 1 1 1 0 2 0 0 1 1 1 0 1 0 0 15 1 1793.7713 P13682;B4DUB8 P13682 411 425 ZNF35 Zinc finger protein 35 yes no 3;4 0.0043257 54.951 By matching By MS/MS By matching By matching By MS/MS By MS/MS 2 2 2 2 2 2 20341000 2623400 2283600 2256500 2059700 4514200 6603100 3277 835 3314 14551;14552;14553;14554;14555;14556;14557;14558;14559;14560;14561;14562 9676;9677;9678 9677 3 IHTGEKPFACNDCGK SNLIVHQRIHTGEKPF FACNDCGKAFTQSANL R I H G K A 1 0 1 1 2 0 1 2 1 1 0 2 0 1 1 0 1 0 0 0 0 15 1 1732.7661 P13682;B4DUB8 P13682 355 369 ZNF35 Zinc finger protein 35 yes no 3;4 0.0025475 60.901 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 2 2 2 2 1 17602000 971560 2361700 2903700 3515300 6440800 1408600 3278 835 3315 14563;14564;14565;14566;14567;14568;14569;14570;14571;14572 9679;9680;9681;9682 9682 4 IHTGEKPFECHECGK ANLVVHQRIHTGEKPF FECHECGKAFIQSANL R I H G K A 0 0 0 0 2 0 3 2 2 1 0 2 0 1 1 0 1 0 0 0 0 15 1 1827.8032 P13682;B4DUB8 P13682 243 257 ZNF35 Zinc finger protein 35 yes no 4 0.0017481 68.168 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 11981000 1060800 1404400 1404500 1296700 2594500 4220300 3279 835 3316 14573;14574;14575;14576;14577;14578 9683;9684;9685 9684 3 IHTGEKPFRCDECGMR YLLQRHEKIHTGEKPF RCDECGMRFIQKYHME K I H M R F 0 2 0 1 2 0 2 2 1 1 0 1 1 1 1 0 1 0 0 0 0 16 2 1991.8764 Q9UQR1;F5H173 Q9UQR1 220 235 ZNF148 Zinc finger protein 148 yes no 4 0.0056322 47.506 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 11700000 0 993610 1072000 799940 1509800 7325000 3280 1626 3317 14579;14580;14581;14582;14583 9686 9686 1 IHTGEKPYACNECGK STLTHHQRIHTGEKPY YACNECGKAFSRSSTL R I H G K A 1 0 1 0 2 0 2 2 1 1 0 2 0 0 1 0 1 0 1 0 0 15 1 1762.7767 P17036 P17036 305 319 ZNF3 Zinc finger protein 3 yes yes 3 0.034847 39.068 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1689600 0 0 442460 0 484170 762990 3281 845 3318 14584;14585;14586 9687 9687 1 IHTGEKPYDCKECGK QQLTLHQRIHTGEKPY YDCKECGKTFSRGYHL R I H G K T 0 0 0 1 2 0 2 2 1 1 0 3 0 0 1 0 1 0 1 0 0 15 2 1820.8186 B4DM57;Q9Y2G7;Q3KNS6-2;Q3KNS6;Q8NA42;Q8N972;A8MQ14 B4DM57 262 276 ZFP30;ZNF829;ZNF383;ZNF709;ZNF850 Zinc finger protein 30 homolog;Zinc finger protein 829;Zinc finger protein 383;Zinc finger protein 709;Zinc finger protein 850 yes no 4 0.019874 41.577 By matching By matching By matching By matching By MS/MS By matching 1 1 905050 0 0 562050 0 343000 0 3282 102 3319 14587;14588 9688 9688 1 IHTGEKPYECDECGK SHLIGHQRIHTGEKPY YECDECGKTFRRSSHL R I H G K T 0 0 0 1 2 0 3 2 1 1 0 2 0 0 1 0 1 0 1 0 0 15 1 1821.7662 Q15776 Q15776 455 469 ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 no no 4 0.0038392 56.139 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 4604900 260410 603250 484990 466200 676330 2113800 3283 1147 3320 14589;14590;14591;14592;14593;14594 9689 9689 1 IHTGEKPYECDQCGK AYLIEHQRIHTGEKPY YECDQCGKAFIKNSSL R I H G K A 0 0 0 1 2 1 2 2 1 1 0 2 0 0 1 0 1 0 1 0 0 15 1 1820.7822 Q6ZN57 Q6ZN57 403 417 ZFP2 Zinc finger protein 2 homolog yes yes 3 0.0025123 64.104 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 13724000 0 0 2871700 0 4737300 6115100 3284 1240 3321 14595;14596;14597 9690;9691;9692 9691 3 IHTGEKPYECEECGK SVLIEHQRIHTGEKPY YECEECGKAFSRRSSL R I H G K A 0 0 0 0 2 0 4 2 1 1 0 2 0 0 1 0 1 0 1 0 0 15 1 1835.7818 Q96LW9;C9J423;Q6P178 Q96LW9 260 274 ZSCAN31 Zinc finger and SCAN domain-containing protein 31 no no 3;4 2.5105E-13 102.33 By MS/MS By matching By matching By matching By matching By MS/MS 2 1 2 2 2 2 28852000 2607100 1785900 3494900 2705600 6339800 11919000 3285 1406 3322 14598;14599;14600;14601;14602;14603;14604;14605;14606;14607;14608 9693;9694;9695 9693 3 IHTGEKPYECNECGK SGLTKHVRIHTGEKPY YECNECGKAYNRFYLL R I H G K A 0 0 1 0 2 0 3 2 1 1 0 2 0 0 1 0 1 0 1 0 0 15 1 1820.7822 P17036;P58317;B4DNH5 P58317 221 235 ZNF3;ZNF121 Zinc finger protein 3;Zinc finger protein 121 no no 3 0.0091032 47.774 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 5277700 2834600 0 0 2443100 0 0 3286 977;845 3323 14609;14610 9696;9697 9697 2 IHTGEKPYECVQCGK SGLINHQRIHTGEKPY YECVQCGKSYSQSSNL R I H G K S 0 0 0 0 2 1 2 2 1 1 0 2 0 0 1 0 1 0 1 1 0 15 1 1804.8236 P17028 P17028 328 342 ZNF24 Zinc finger protein 24 yes yes 3;4 0.00011764 88.163 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 1 2 2 36558000 0 8317400 2921800 0 4044700 21274000 3287 844 3324 14611;14612;14613;14614;14615;14616;14617 9698;9699;9700;9701;9702;9703;9704 9702 7 IHTGEKPYQCDECGK TSLIQHQRIHTGEKPY YQCDECGKAFRQRKKT R I H G K A 0 0 0 1 2 1 2 2 1 1 0 2 0 0 1 0 1 0 1 0 0 15 1 1820.7822 O43309 O43309 546 560 ZSCAN12 Zinc finger and SCAN domain-containing protein 12 yes yes 3;4 0.00087896 77.204 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 1 1 1 1 17301000 2241400 3312500 2233900 2221300 2620800 4671400 3288 714 3325 14618;14619;14620;14621;14622;14623;14624 9705;9706 9705 2 IHTGEKPYQCDTCGK RSLIEHQKIHTGEKPY YQCDTCGKGFTRTSYL K I H G K G 0 0 0 1 2 1 1 2 1 1 0 2 0 0 1 0 2 0 1 0 0 15 1 1792.7873 B7Z7H3;Q969J2 B7Z7H3 353 367 ZKSCAN4 Zinc finger protein with KRAB and SCAN domains 4 yes no 3 0.0008586 77.42 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 7189100 663190 859240 1456500 553960 1290800 2365400 3289 194 3326 14625;14626;14627;14628;14629;14630 9707 9707 1 IHTGEKPYQCNMCGK CSLLEHHKIHTGEKPY YQCNMCGKAFRRNSHL K I H G K A 0 0 1 0 2 1 1 2 1 1 0 2 1 0 1 0 1 0 1 0 0 15 1 1821.796 B7Z7H3;Q969J2;H7C1Y5;H7BY15 B7Z7H3 270 284 ZKSCAN4 Zinc finger protein with KRAB and SCAN domains 4 yes no 3 0.0021696 67.019 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 7527500 0 983860 1496600 915530 1457000 2674500 3290 194 3327 14631;14632;14633;14634;14635 9708 9708 1 IHTGEKPYVCQECGK SYLVIHERIHTGEKPY YVCQECGKGFSYSHKL R I H G K G 0 0 0 0 2 1 2 2 1 1 0 2 0 0 1 0 1 0 1 1 0 15 1 1804.8236 Q96SK3-2;F5H141;Q96SK3;F8WEC7;Q8WTR7 Q96SK3-2 145 159 ZNF607;ZNF473 Zinc finger protein 607;Zinc finger protein 473 yes no 3 0.0025025 60.196 By MS/MS By matching By matching By matching By matching By matching 1 1317600 1317600 0 0 0 0 0 3291 508 3328 14636 9709 9709 1 IHTGERPHVCPDCGK SHFSAHRRIHTGERPH HVCPDCGKSFSKSSDL R I H G K S 0 1 0 1 2 0 1 2 2 1 0 1 0 0 2 0 1 0 0 1 0 15 1 1761.8039 Q8IWY8-2;Q8IWY8;Q8IWY8-4 Q8IWY8-2 663 677 ZSCAN29 Zinc finger and SCAN domain-containing protein 29 yes no 4 0.019141 43.305 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 4520500 0 1067800 1029700 392730 577450 1452900 3292 1282 3329 14637;14638;14639;14640;14641 9710 9710 1 IHTGERPYECNECGK SLLIRHQRIHTGERPY YECNECGKSFIRSSSL R I H G K S 0 1 1 0 2 0 3 2 1 1 0 1 0 0 1 0 1 0 1 0 0 15 1 1848.7883 E7ENV5;O75123 E7ENV5 216 230 ZNF623 Zinc finger protein 623 no no 3 0.011066 46.704 By matching By matching By matching By matching By MS/MS By matching 1 1 1 3684100 0 778540 0 0 1244900 1660700 3293 353 3330 14642;14643;14644 9711 9711 1 IHTGQKPYVCSK ANLVVHQRIHTGQKPY QKPYVCSKCGKAFTQS R I H S K C 0 0 0 0 1 1 0 1 1 1 0 2 0 0 1 1 1 0 1 1 0 12 1 1416.7184 P13682;B4DUB8 P13682 271 282 ZNF35 Zinc finger protein 35 yes no 3 0.026451 49.333 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1856100 0 935980 834730 85345 0 0 3294 835 3331 14645;14646;14647 9712;9713 9712 2 IHTGYKPYSCEVCGK AHLKEHLKIHTGYKPY YSCEVCGKSFIRAPDL K I H G K S 0 0 0 0 2 0 1 2 1 1 0 2 0 0 1 1 1 0 2 1 0 15 1 1797.8178 O43829 O43829 326 340 ZBTB14 Zinc finger and BTB domain-containing protein 14 yes yes 3 0.02113 42.242 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 11667000 1580400 1331900 1248600 1215700 2084500 4206100 3295 722 3332 14648;14649;14650;14651;14652;14653 9714;9715 9715 2 IHVQSSSDSSDEPAEK YIEVEKPKIHVQSSSD SSDEPAEKRERKDKVS K I H E K R 1 0 0 2 0 1 2 0 1 1 0 1 0 0 1 5 0 0 0 1 0 16 0 1714.7646 Q8WUF8-3;Q8WUF8;B4DMI0;Q8WUF8-2;E9PBM2;Q8WUF8-4 Q8WUF8-3 165 180 FAM172A Protein FAM172A yes no 3 0.0048609 48.423 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 2110700 0 548210 259550 0 266840 1036100 3296 1341 3333 14654;14655;14656;14657 9716;9717 9716 2 IHYCDYPGCTK NPDLEKRRIHYCDYPG CDYPGCTKVYTKSSHL R I H T K V 0 0 0 1 2 0 0 1 1 1 0 1 0 0 1 0 1 0 2 0 0 11 0 1412.5853 A2TJX0;B4DL96;Q13887 A2TJX0 281 291 KLF5 Krueppel-like factor 5 yes no 2 1.9934E-05 104.43 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 2740400 426490 0 545960 0 676940 1091100 3297 9 3334 14658;14659;14660;14661 9718;9719 9718 2 IHYCDYPGCTKVYTK NPDLEKRRIHYCDYPG GCTKVYTKSSHLKAHL R I H T K S 0 0 0 1 2 0 0 1 1 1 0 2 0 0 1 0 2 0 3 1 0 15 1 1903.8597 A2TJX0;B4DL96;Q13887 A2TJX0 281 295 KLF5 Krueppel-like factor 5 yes no 3 0.0017643 68.033 By MS/MS By matching By matching By matching By matching By matching 1 1 1 2263300 1230300 0 561320 471680 0 0 3298 9 3335 14662;14663;14664 9720;9721 9721 2 IIAEKTKIPAVFK NGECAQKKIIAEKTKI TKIPAVFKIDALNENK K I I F K I 2 0 0 0 0 0 1 0 0 3 0 3 0 1 1 0 1 0 0 1 0 13 2 1456.9017 CON__P02754 CON__P02754 71 83 yes yes 3 1.5986E-73 138.42 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 1 81584000 21232000 14834000 19801000 6184200 4891900 14642000 + 3299 292 3336 14665;14666;14667;14668;14669;14670;14671;14672 9722;9723;9724;9725;9726;9727;9728 9723 7 IIEILESGHLRK IGKRMAEKIIEILESG LESGHLRKLDHISESV K I I R K L 0 1 0 0 0 0 2 1 1 3 2 1 0 0 0 1 0 0 0 0 0 12 1 1406.8245 Q5JQP8;Q9HAJ3;Q9UGP5;Q5JQP3;Q5JQP4;Q9BTN8;B4DEF5;Q5JQP2 Q5JQP8 225 236 POLL DNA polymerase lambda yes no 3 0.00017726 94.82 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 8787900 0 0 4140600 0 3016100 1631200 3300 1183 3337 14673;14674;14675 9729;9730 9730 2 IIELKSEILSK DKKTGLGRIIELKSEI LKSEILSKKQNELKNV R I I S K K 0 0 0 0 0 0 2 0 0 3 2 2 0 0 0 2 0 0 0 0 0 11 1 1271.7701 Q92878-2;Q92878;Q92878-3;E7EN38;E7ESD9 Q92878-2 448 458 RAD50 DNA repair protein RAD50 yes no 3 0.0042239 78.513 By MS/MS By matching By matching By matching By matching By matching 1 3839900 3839900 0 0 0 0 0 3301 1362 3338 14676 9731 9731 1 IIEPIQSR LACNASDKIIEPIQSR IIEPIQSRCAVLRYTK K I I S R C 0 1 0 0 0 1 1 0 0 3 0 0 0 0 1 1 0 0 0 0 0 8 0 954.54983 P35250-2;P35250;H7C5P4 P35250-2 143 150 RFC2 Replication factor C subunit 2 yes no 2 0.029415 71.379 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2469900 0 470060 0 0 927270 1072500 3302 895 3339 14677;14678;14679 9732 9732 1 IIEQINEDTGTAR PYNRIDSRIIEQINED NEDTGTARAIQRKPNP R I I A R A 1 1 1 1 0 1 2 1 0 3 0 0 0 0 0 0 2 0 0 0 0 13 0 1458.7314 Q14CA3;Q14669 Q14CA3 830 842 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 2 0.038415 52.891 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2396300 306010 747670 0 0 0 1342600 3303 1122 3340 14680;14681;14682 9733 9733 0 IIETENMMDRIVTGLSESSVK NDEDIRKKIIETENMM GLSESSVKVRLAAVRC K I I V K V 0 1 1 1 0 0 3 1 0 3 1 1 2 0 0 3 2 0 0 2 0 21 1 2351.1712 C9J2I1;H0YGM5;B7Z637;B7Z441;Q8IUR7-3;F5GWK4;Q8IUR7-2;A8MTG8;Q8IUR7 C9J2I1 273 293 ARMC8 Armadillo repeat-containing protein 8 yes no 3 0.032471 41.513 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 3304 41 3341 14683 9734 9734 7;8 1 IIGAGKPWHK DSVYAAEKIIGAGKPW GAGKPWHKNCFRCAKC K I I H K N 1 0 0 0 0 0 0 2 1 2 0 2 0 0 1 0 0 1 0 0 0 10 1 1105.6396 Q16527;F8VW96;F8VQR7 Q16527 132 141 CSRP2 Cysteine and glycine-rich protein 2 yes no 2 0.0059514 101.9 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 12469000 0 1338800 5769100 730390 1599100 3031300 3305 1152 3342 14684;14685;14686;14687;14688 9735;9736 9735 2 IIGINGDFFANMVVDAVLAIK ________________ VDAVLAIKYTDIRGQP K I I I K Y 3 0 2 2 0 0 0 2 0 4 1 1 1 2 0 0 0 0 0 3 0 21 0 2219.2024 E7EQR6;E7ERF2;P17987 E7EQR6 5 25 TCP1 T-complex protein 1 subunit alpha yes no 2;3 0 197.6 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 4 2 1 4 2 735560000 197660000 119420000 210420000 31509000 92679000 83872000 3306 363 3343;3344 14689;14690;14691;14692;14693;14694;14695;14696;14697;14698;14699;14700;14701;14702;14703;14704;14705 9737;9738;9739;9740;9741;9742;9743;9744;9745;9746;9747;9748;9749;9750;9751;9752;9753;9754;9755 9753 40 18 IIGINGDFFANMVVDAVLAIKYTDIR ________________ AIKYTDIRGQPRYPVN K I I I R G 3 1 2 3 0 0 0 2 0 5 1 1 1 2 0 0 1 0 1 3 0 26 1 2867.5255 E7EQR6;E7ERF2;P17987 E7EQR6 5 30 TCP1 T-complex protein 1 subunit alpha yes no 3 1.0842E-189 146.45 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 184490000 64520000 29803000 31207000 58957000 0 0 3307 363 3345 14706;14707;14708;14709 9756;9757;9758 9758 3 IIHTGEKPYECSECGK SSSLIRHKIIHTGEKP YECSECGKAFSLNSNL K I I G K A 0 0 0 0 2 0 3 2 1 2 0 2 0 0 1 1 1 0 1 0 0 16 1 1906.8553 B3KRF7;E9PC66;P17029 B3KRF7 184 199 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 yes no 3 0.019605 41.014 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 5947200 511050 693480 1594800 744990 578210 1824700 3308 74 3346 14710;14711;14712;14713;14714;14715 9759 9759 1 IIISKHDGGSPSIKAK VGSTGVAKIIISKHDG GSPSIKAKVTLQKPGE K I I A K V 1 0 0 1 0 0 0 2 1 4 0 3 0 0 1 3 0 0 0 0 0 16 2 1649.9465 Q15648 Q15648 1392 1407 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 4 0.0023008 56.514 By matching By matching By MS/MS By matching By matching By matching 1 591500 0 0 591500 0 0 0 3309 1143 3347 14716 9760 9760 1 IIKEQPQPSGK HTPPVLKKIIKEQPQP EQPQPSGKQESGSEIH K I I G K Q 0 0 0 0 0 2 1 1 0 2 0 2 0 0 2 1 0 0 0 0 0 11 1 1223.6874 P46013;F5H4V4;P46013-2;E7EN66 P46013 550 560 MKI67 Antigen KI-67 no no 3 0.01272 61.958 By matching By MS/MS By matching By matching By matching By matching 1 1 1255100 0 1086800 0 0 168280 0 3310 919;920 3348 14717;14718 9761 9761 1 IIKEQPQPSGKQESGSEIHVEVK HTPPVLKKIIKEQPQP SEIHVEVKAQSLVISP K I I V K A 0 0 0 0 0 3 4 2 1 3 0 3 0 0 2 3 0 0 0 2 0 23 2 2546.334 P46013;F5H4V4;P46013-2;E7EN66 P46013 550 572 MKI67 Antigen KI-67 no no 4;5 2.6387E-54 108.13 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 68068000 6861400 12754000 13425000 7783100 8899600 18345000 3311 919;920 3349 14719;14720;14721;14722;14723;14724;14725;14726;14727;14728;14729 9762;9763;9764;9765;9766;9767;9768;9769;9770 9765 9 IIKPDPEDLQLDK DGKSCVAKIIKPDPED PEDLQLDKSRDVPVDA K I I D K S 0 0 0 3 0 1 1 0 0 2 2 2 0 0 2 0 0 0 0 0 0 13 1 1522.8243 B7Z5N6;Q5T1V6-2;Q5T1V6;Q5T1V5 B7Z5N6 24 36 DDX59 Probable ATP-dependent RNA helicase DDX59 yes no 3 0.0037224 63.292 By matching By MS/MS By matching By matching By matching By matching 1 3323200 0 3323200 0 0 0 0 3312 190 3350 14730 9771 9771 1 IIKPLQYQSTVASGTVAR ERRNSRGKIIKPLQYQ VASGTVARVEPNIKWF K I I A R V 2 1 0 0 0 2 0 1 0 2 1 1 0 0 1 2 2 0 1 2 0 18 1 1931.084 Q13823 Q13823 56 73 GNL2 Nucleolar GTP-binding protein 2 yes yes 3 0.0010047 74.812 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 5592300 0 1170800 1336900 0 0 3084600 3313 1092 3351 14731;14732;14733 9772;9773 9773 2 IILDEAHNVKNPR LLRIAWARIILDEAHN AHNVKNPRVQTSIAVC R I I P R V 1 1 2 1 0 0 1 0 1 2 1 1 0 0 1 0 0 0 0 1 0 13 1 1517.8314 Q9UNY4 Q9UNY4 734 746 TTF2 Transcription termination factor 2 yes yes 3 0.017403 50.354 By matching By matching By matching By matching By matching By MS/MS 1 1 1072900 265130 0 0 0 0 807730 3314 1618 3352 14734;14735 9774 9774 1 IILPNVNSDSVHTK AEAGETGRIILPNVNS NSDSVHTKSEKNFQAV R I I T K S 0 0 2 1 0 0 0 0 1 2 1 1 0 0 1 2 1 0 0 2 0 14 0 1535.8308 Q15652-2;Q15652-3;Q15652;H7BXU7 Q15652-2 1135 1148 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes no 3 5.7605E-20 107.93 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 4374600 2097900 858090 0 0 0 1418700 3315 1144 3353 14736;14737;14738 9775;9776 9776 2 IILQPCGSK SSSQSSGKIILQPCGS ILQPCGSKSSSSGHPC K I I S K S 0 0 0 0 1 1 0 1 0 2 1 1 0 0 1 1 0 0 0 0 0 9 0 1014.5532 Q2L6G8;Q15517;G8JLG2 Q2L6G8 443 451 CDSN Corneodesmosin yes no 2 0.00021076 112.11 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 2 2 52988000 0 6506200 14389000 14754000 8747300 8591000 3316 601 3354 14739;14740;14741;14742;14743;14744;14745 9777;9778 9778 2 IILSDEGK YPPCGRRKIILSDEGK IILSDEGKMYGRNELI K I I G K M 0 0 0 1 0 0 1 1 0 2 1 1 0 0 0 1 0 0 0 0 0 8 0 873.48075 H0Y3A6;H0YGS2;H0Y308;Q15561;Q15562;H0YCZ6;H0Y7B0;A4FUP2;H0YEJ9;P28347;H0YE88;Q99594 A4FUP2 74 81 TEAD4;TEAD2;TEAD1;TEAD3 Transcriptional enhancer factor TEF-3;Transcriptional enhancer factor TEF-4;Transcriptional enhancer factor TEF-1;Transcriptional enhancer factor TEF-5 no no 1;2 0.0061452 107.29 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 2 1 123520000 19018000 12628000 14909000 8568500 30206000 38194000 3317 606;12;1429 3355 14746;14747;14748;14749;14750;14751;14752;14753;14754 9779;9780;9781;9782;9783;9784;9785;9786 9779 8 IINDNATYCR YHFPELVKIINDNATY NDNATYCRLAQFIGNR K I I C R L 1 1 2 1 1 0 0 0 0 2 0 0 0 0 0 0 1 0 1 0 0 10 0 1238.5714 O00567;Q5JXT2 O00567 203 212 NOP56 Nucleolar protein 56 yes no 2 0.0027003 99.283 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 6910100 563290 547080 0 417730 2283900 3098100 3318 692 3356 14755;14756;14757;14758;14759 9787;9788;9789;9790 9787 4 IINEPTAAAIAYGLDK IAGLNVLRIINEPTAA AIAYGLDKKVGAERNV R I I D K K 4 0 1 1 0 0 1 1 0 3 1 1 0 0 1 0 1 0 1 0 0 16 0 1658.8879 P11142;E9PKE3;P11142-2;E9PN89;E9PLF4;P54652;E9PI65;F8W1P1;B4DXY3;F8WEE3;Q53FA3;P34931;H0YIE7;P11021;B4DEF7 P11142 172 187 HSPA8;HSPA2;HSPA1L;HSPA5 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1-like;78 kDa glucose-regulated protein no no 2 0.018873 41.088 By matching By matching By matching By matching By MS/MS By matching 1 101500000 0 0 0 0 101500000 0 3319 824;823 3357 14760 9791 9791 1 IINGIVQK RLAGSRNKIINGIVQK IINGIVQKQDTITEES K I I Q K Q 0 0 1 0 0 1 0 1 0 3 0 1 0 0 0 0 0 0 0 1 0 8 0 883.5491 O94913;E9PKN0;E9PQ01 O94913 449 456 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes no 2 0.025385 75.189 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 5913300 575710 600750 495010 543020 1258500 2440400 3320 758 3358 14761;14762;14763;14764;14765;14766 9792;9793 9792 2 IINLDNESQTTSSSNNEKPGEQEK VMEHVYEKIINLDNES EKPGEQEKEEDIAVLA K I I E K E 0 0 4 1 0 2 4 1 0 2 1 2 0 0 1 4 2 0 0 0 0 24 1 2661.2366 Q8TAF3-2;C9JQ19;Q8TAF3-5;Q8TAF3-4;Q8TAF3-3;Q8TAF3 Q8TAF3-2 46 69 WDR48 WD repeat-containing protein 48 yes no 3 1.3135E-08 70.452 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 13724000 1936500 3259300 2353600 1470200 1511100 3193600 3321 264 3359 14767;14768;14769;14770;14771;14772 9794;9795;9796;9797 9794 4 IIPEITAMK MPSPYGRRIIPEITAM IPEITAMKADASKKLL R I I M K A 1 0 0 0 0 0 1 0 0 3 0 1 1 0 1 0 1 0 0 0 0 9 0 1014.5784 Q02880-2;Q02880;B4DLV2 Q02880-2 1237 1245 TOP2B DNA topoisomerase 2-beta yes no 2 0.0061685 93.178 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 90427000 0 24929000 18801000 0 6300500 40397000 3322 1035 3360 14773;14774;14775;14776 9798;9799;9800 9799 3 IIPGFMCQGGDFTRHNGTGGK YKGSCFHRIIPGFMCQ RHNGTGGKSIYGEKFE R I I G K S 0 1 1 1 1 1 0 6 1 2 0 1 1 2 1 0 2 0 0 0 0 21 1 2249.047 P62937;B4DM82;F8WE65;C9J5S7 P62937 56 76 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 3;4 6.2804E-46 111.63 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 2 1 137880000 5611300 29186000 36662000 20522000 14595000 31305000 3323 999 3361 14777;14778;14779;14780;14781;14782;14783;14784 9801;9802;9803;9804;9805;9806;9807;9808 9806 7 IIQEFLSK LEREQGEKIIQEFLSK IIQEFLSKVKQMPFTE K I I S K V 0 0 0 0 0 1 1 0 0 2 1 1 0 1 0 1 0 0 0 0 0 8 0 976.55933 B4E2Z2;P43246;B4DL39;B4DSB9 B4E2Z2 817 824 MSH2 DNA mismatch repair protein Msh2 yes no 2 0.0088271 100.02 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 33573000 7599900 2821600 6440900 1408800 2360200 12942000 3324 162 3362 14785;14786;14787;14788;14789;14790 9809;9810;9811;9812 9810 4 IIQEFLSKVK LEREQGEKIIQEFLSK QEFLSKVKQMPFTEMS K I I V K Q 0 0 0 0 0 1 1 0 0 2 1 2 0 1 0 1 0 0 0 1 0 10 1 1203.7227 B4E2Z2;P43246;B4DL39;B4DSB9 B4E2Z2 817 826 MSH2 DNA mismatch repair protein Msh2 yes no 3 0.0025663 101.38 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 22159000 0 0 0 2032200 0 20127000 3325 162 3363 14791;14792 9813;9814 9813 2 IIQQGLIR SVQIQGQRIIQQGLIR IIQQGLIRVANVPNTS R I I I R V 0 1 0 0 0 2 0 1 0 3 1 0 0 0 0 0 0 0 0 0 0 8 0 939.58655 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7 Q86YP4 286 293 GATAD2A Transcriptional repressor p66-alpha yes no 2 0.02547 75.109 By matching By MS/MS By matching By matching By matching By matching 1 1 1 18099000 0 4099900 3015600 0 0 10983000 3326 170 3364 14793;14794;14795 9815 9815 1 IISDNLTYCK WHFPELGKIISDNLTY SDNLTYCKCLQKVGDR K I I C K C 0 0 1 1 1 0 0 0 0 2 1 1 0 0 0 1 1 0 1 0 0 10 0 1225.6013 Q9Y2X3;H7BZ72 Q9Y2X3 197 206 NOP58 Nucleolar protein 58 yes no 2 0.0031326 91.549 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 56012000 6874900 7728500 0 5279600 15083000 21046000 3327 1640 3365 14796;14797;14798;14799;14800 9816;9817;9818;9819 9817 4 IISNASCTTNCLAPLAK EKYDNSLKIISNASCT NCLAPLAKVIHDNFGI K I I A K V 3 0 2 0 2 0 0 0 0 2 2 1 0 0 1 2 2 0 0 0 0 17 0 1832.9125 P04406;E7EUT5;E7EUT4;E7EU54 P04406 146 162 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 3.1975E-131 142.94 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 71757000 29365000 6355700 12089000 2940200 7377800 13628000 3328 791 3366 14801;14802;14803;14804;14805;14806 9820;9821;9822;9823 9823 4 IISSNIVSGTTTK SLATLGGKIISSNIVS IVSGTTTKITTIPMTS K I I T K I 0 0 1 0 0 0 0 1 0 3 0 1 0 0 0 3 3 0 0 1 0 13 0 1319.7296 Q7Z589-2;E9PMC9;Q7Z589;Q17RM7;B7ZKU2;B7ZKU0;B7ZKT8 Q7Z589-2 554 566 EMSY;C11orf30 Protein EMSY yes no 2 0.0024508 65.043 By matching By matching By matching By matching By matching By MS/MS 1 1010700 0 0 0 0 0 1010700 3329 208 3367 14807 9824 9824 1 IISTTTLNK VSGSSSSKIISTTTLN ISTTTLNKRR______ K I I N K R 0 0 1 0 0 0 0 0 0 2 1 1 0 0 0 1 3 0 0 0 0 9 0 989.57571 F8VS64;P19013;CON__P19013;F5H8K9 F8VS64 510 518 KRT4 Keratin, type II cytoskeletal 4 yes no 2 0.0060764 93.598 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 38520000 0 0 7562300 702980 7931400 22324000 + 3330 300 3368 14808;14809;14810;14811 9825 9825 1 IITDVIGNPEEERR RSQRRDLKIITDVIGN GNPEEERRAAFYHQPW K I I R R A 0 2 1 1 0 0 3 1 0 3 0 0 0 0 1 0 1 0 0 1 0 14 1 1639.8529 Q92925-3;B9EGA3;Q92925-2;Q92925 Q92925-3 433 446 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 yes no 3 0.0068134 48.568 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3307000 0 700230 0 0 958940 1647900 3331 217 3369 14812;14813;14814 9826 9826 1 IITHPNFNGNTLDNDIMLIK EQFINAAKIITHPNFN DNDIMLIKLSSPATLN K I I I K L 0 0 4 2 0 0 0 1 1 4 2 1 1 1 1 0 2 0 0 0 0 20 0 2282.1729 CON__P00761 CON__P00761 78 97 yes yes 3 0.0076928 41.41 By matching By matching By matching By MS/MS By matching By matching 1 2138500 0 0 0 2138500 0 0 + 3332 284 3370 14815 9827 9827 1 IITIEETHEELK VAPHPREKIITIEETH EETHEELKKQYIFQLS K I I L K K 0 0 0 0 0 0 4 0 1 3 1 1 0 0 0 0 2 0 0 0 0 12 0 1453.7664 Q92547 Q92547 1254 1265 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 2;3 1.4304E-18 117.25 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 2 25845000 1927400 4312400 3248700 2394100 7252200 6710600 3333 1351 3371 14816;14817;14818;14819;14820;14821;14822;14823;14824 9828;9829;9830;9831;9832;9833;9834 9833 7 IITIEETHEELKK VAPHPREKIITIEETH ETHEELKKQYIFQLSS K I I K K Q 0 0 0 0 0 0 4 0 1 3 1 2 0 0 0 0 2 0 0 0 0 13 1 1581.8614 Q92547 Q92547 1254 1266 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 3 0.0013032 64.945 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2 1 11915000 1504600 0 1727700 0 3749700 4932600 3334 1351 3372 14825;14826;14827;14828;14829 9835;9836 9836 2 IITQQVQPSK IKQESGVKIITQQVQP TQQVQPSKILPKPVTA K I I S K I 0 0 0 0 0 3 0 0 0 2 0 1 0 0 1 1 1 0 0 1 0 10 0 1140.6503 Q7Z589-2;E9PMC9;Q7Z589;Q17RM7;B7ZKU2;B7ZKU0;B7ZKT8;F5H2F0;E9PPE6 Q7Z589-2 458 467 EMSY;C11orf30 Protein EMSY yes no 2 0.0086142 80.916 By matching By matching By matching By matching By matching By MS/MS 1 1 1308200 0 0 0 0 405330 902900 3335 208 3373 14830;14831 9837 9837 1 IIVGDATEK KTSKRGGKIIVGDATE IVGDATEKDASKKSDS K I I E K D 1 0 0 1 0 0 1 1 0 2 0 1 0 0 0 0 1 0 0 1 0 9 0 944.51786 Q96I25;H0Y6J6 Q96I25 277 285 RBM17 Splicing factor 45 yes no 2 0.0065883 98.044 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 2 1 28158000 4215700 3465300 0 2856600 9713500 7907300 3336 1395 3374 14832;14833;14834;14835;14836;14837 9838;9839;9840;9841 9838 4 IIVNDRQLACAR EKAMKRDKIIVNDRQL DRQLACARIASPEGQD K I I A R I 2 2 1 1 1 1 0 0 0 2 1 0 0 0 0 0 0 0 0 1 0 12 1 1427.7667 Q9Y3I0 Q9Y3I0 286 297 C22orf28 tRNA-splicing ligase RtcB homolog yes yes 3 0.023819 50.484 By MS/MS By matching By matching By matching By matching By matching 1 1 5628700 2226700 3402000 0 0 0 0 3337 1647 3375 14838;14839 9842 9842 1 IKATVEELKEK KQHMGYAKIKATVEEL TVEELKEKLRKRTEEP K I K E K L 1 0 0 0 0 0 3 0 0 1 1 3 0 0 0 0 1 0 0 1 0 11 2 1286.7446 O95232;B4DJ96;H0YA81 O95232 223 233 LUC7L3 Luc7-like protein 3 yes no 2;3 8.0752E-127 161.93 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 2 2 2 2 49461000 4348700 6444200 10058000 5506500 11455000 11648000 3338 766 3376 14840;14841;14842;14843;14844;14845;14846;14847;14848;14849;14850 9843;9844;9845;9846;9847;9848 9848 6 IKEKGSFSDTGLGDGK QTNTDKEKIKEKGSFS DTGLGDGKMKSDSFAP K I K G K M 0 0 0 2 0 0 1 4 0 1 1 3 0 1 0 2 1 0 0 0 0 16 2 1637.8261 Q9Y2W1 Q9Y2W1 372 387 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 4.6339E-05 88.951 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 7480600 1503800 679560 874920 1144700 1731000 1546700 3339 1639 3377 14851;14852;14853;14854;14855;14856;14857 9849;9850;9851;9852 9851 4 IKEVEEKQPEMK TREKIEAKIKEVEEKQ EEKQPEMKSGFMASFL K I K M K S 0 0 0 0 0 1 4 0 0 1 0 3 1 0 1 0 0 0 0 1 0 12 2 1486.7701 Q9ULL5-3;Q9ULL5-2;A6NFN6;Q9ULL5 Q9ULL5-3 1267 1278 PRR12 Proline-rich protein 12 yes no 3 0.0056087 84.169 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 7200000 0 942190 1390500 979520 2457300 1430500 3340 1608 3378 14858;14859;14860;14861;14862 9853;9854 9853 2 IKEVEEKQPEVK HQEKMRQKIKEVEEKQ EEKQPEVKTGFIASFL K I K V K T 0 0 0 0 0 1 4 0 0 1 0 3 0 0 1 0 0 0 0 2 0 12 2 1454.7981 C9JJ88;Q2KHR3-2;Q2KHR3;H0YCQ7 C9JJ88 896 907 QSER1 Glutamine and serine-rich protein 1 yes no 3 0.021914 62.162 By matching By matching By matching By matching By matching By MS/MS 1 1087500 0 0 0 0 0 1087500 3341 253 3379 14863 9855 9855 1 IKFSDDRVCK MGDTTRQRIKFSDDRV FSDDRVCKSHLLNCCP R I K C K S 0 1 0 2 1 0 0 0 0 1 0 2 0 1 0 1 0 0 0 1 0 10 2 1266.6391 B7Z500;Q9Y383-2;Q9Y383;B7Z4Q3;C9JWT3 B7Z500 25 34 LUC7L2;C7orf55 Putative RNA-binding protein Luc7-like 2;UPF0562 protein C7orf55 yes no 3 0.0078591 101.38 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 23628000 2107100 3765700 3259300 2386600 3756800 8352700 3342 186 3380 14864;14865;14866;14867;14868;14869 9856;9857 9856 2 IKGEHPGLSIGDVAK FCSEYRPKIKGEHPGL LSIGDVAKKLGEMWNN K I K A K K 1 0 0 1 0 0 1 3 1 2 1 2 0 0 1 1 0 0 0 1 0 15 1 1519.8358 Q5T7C4;Q5T7C6;P09429;B2RPK0 Q5T7C4 113 127 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 yes no 3 0.0013599 69.045 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 6933200 0 1108000 1061700 956660 1388400 2418500 3343 813 3381 14870;14871;14872;14873;14874 9858;9859 9858 2 IKKLPEYNPR ESETEKEKIKKLPEYN KLPEYNPRTL______ K I K P R T 0 1 1 0 0 0 1 0 0 1 1 2 0 0 2 0 0 0 1 0 0 10 2 1256.7241 Q9P258 Q9P258 511 520 RCC2 Protein RCC2 yes yes 3 1.2028E-05 112.71 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 1 1 42396000 9794100 7748300 4571500 3977200 4963400 11341000 3344 1575 3382 14875;14876;14877;14878;14879;14880;14881;14882 9860;9861;9862;9863;9864;9865;9866 9862 7 IKLEGGIKGIGK EEKQRLEKIKLEGGIK GGIKGIGKTSTNSSKN K I K G K T 0 0 0 0 0 0 1 4 0 3 1 3 0 0 0 0 0 0 0 0 0 12 2 1211.7602 Q12830-4;Q12830-2;Q12830 Q12830-4 1208 1219 BPTF Nucleosome-remodeling factor subunit BPTF yes no 3 0.034254 58.172 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 4455100 0 656930 767360 373620 960670 1696500 3345 1061 3383 14883;14884;14885;14886;14887 9867 9867 1 IKMIDMPVER EIFSTYGKIKMIDMPV MIDMPVERMHPHLSKG K I K E R M 0 1 0 1 0 0 1 0 0 2 0 1 2 0 1 0 0 0 0 1 0 10 1 1230.6464 H3BV80;H3BMM9;H3BTC0;Q15287;H3BR57;H3BPG5;H3BMS0;Q15287-3;Q15287-2 H3BV80 93 102 RNPS1 RNA-binding protein with serine-rich domain 1 yes no 3 0.0087226 81.625 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 14741000 4790900 0 1663800 0 8286700 0 3346 631 3384 14888;14889;14890 9868;9869 9868 2 IKPAATSHVEGSGGVSAK TYWMKMRRIKPAATSH GSGGVSAKGKRKPRQE R I K A K G 3 0 0 0 0 0 1 3 1 1 0 2 0 0 1 3 1 0 0 2 0 18 1 1694.8951 B4DSM5;G3XAG1;Q96ME7;Q86XK6 B4DSM5 82 99 ZNF512 Zinc finger protein 512 yes no 3;4 0.0083934 43.794 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2 2 2 2 6445000 424160 533770 1136800 531530 1721500 2097200 3347 123 3385 14891;14892;14893;14894;14895;14896;14897;14898;14899;14900 9870;9871 9870 2 IKPAATSHVEGSGGVSAKGK TYWMKMRRIKPAATSH GGVSAKGKRKPRQEED R I K G K R 3 0 0 0 0 0 1 4 1 1 0 3 0 0 1 3 1 0 0 2 0 20 2 1880.0116 B4DSM5;G3XAG1;Q96ME7;Q86XK6 B4DSM5 82 101 ZNF512 Zinc finger protein 512 yes no 4 0.0053834 44.577 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 10890000 1424100 1042500 2600900 1370700 1970300 2481200 3348 123 3386 14901;14902;14903;14904;14905;14906 9872 9872 1 IKQEITEGELK LPLSMEAKIKQEITEG EITEGELKAFMTAPGG K I K L K A 0 0 0 0 0 1 3 1 0 2 1 2 0 0 0 0 1 0 0 0 0 11 1 1286.7082 Q92766-3;Q92766;Q92766-2;C9JU34 Q92766-3 614 624 RREB1 Ras-responsive element-binding protein 1 yes no 3 0.0016684 90.913 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4928700 0 0 1442900 695030 988410 1802300 3349 1357 3387 14907;14908;14909;14910 9873 9873 1 IKQYQAGQTVTCFLK HSVSPMEKIKQYQAGQ QTVTCFLKKYNVVKKW K I K L K K 1 0 0 0 1 3 0 1 0 1 1 2 0 1 0 0 2 0 1 1 0 15 1 1783.9291 Q14690 Q14690 1143 1157 PDCD11 Protein RRP5 homolog yes yes 3 0.0032001 57.53 By matching By matching By matching By MS/MS By matching By matching 1 3847900 0 0 0 3847900 0 0 3350 1112 3388 14911 9874 9874 1 IKTFSEVLAEK ARSSSTIRIKTFSEVL FSEVLAEKKHRQQEAE R I K E K K 1 0 0 0 0 0 2 0 0 1 1 2 0 1 0 1 1 0 0 1 0 11 1 1263.7075 B4DLG2;O75152;E9PQ61;E9PBY7 B4DLG2 349 359 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 3 0.031008 76.326 By matching By matching By MS/MS By matching By matching By matching 1 0 0 0 0 0 0 0 3351 97 3389 14912 9875 9875 1 IKVAEDEAEAAAAAK AEKNGLVKIKVAEDEA AEAAAAAKFTGLSKEE K I K A K F 7 0 0 1 0 0 3 0 0 1 0 2 0 0 0 0 0 0 0 1 0 15 1 1485.7675 F5H867;F5H0E2;H0YFS2;B4E2Z3;P08195-2;P08195-3;F5GZS6;P08195;P08195-4 F5H867 45 59 SLC3A2 4F2 cell-surface antigen heavy chain yes no 3 0.0023078 66.674 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 6359500 683570 1811300 0 0 815700 3048900 3352 163 3390 14913;14914;14915;14916 9876;9877 9876 2 IKVKVEEEEEEK EKKAKKAKIKVKVEEE VEEEEEEKVAEEEETS K I K E K V 0 0 0 0 0 0 6 0 0 1 0 3 0 0 0 0 0 0 0 2 0 12 2 1487.7719 Q9Y2X3 Q9Y2X3 464 475 NOP58 Nucleolar protein 58 yes yes 3 1.1471E-117 159.44 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 2 1 34872000 7908300 2857700 3705300 7410700 7437200 5552800 3353 1640 3391 14917;14918;14919;14920;14921;14922;14923 9878;9879;9880;9881;9882 9880 5 ILAAALTECHRK GMGIGGGKILAAALTE ALTECHRKSSAQGKPL K I L R K S 3 1 0 0 1 0 1 0 1 1 2 1 0 0 0 0 1 0 0 0 0 12 1 1381.75 P46060 P46060 161 172 RANGAP1 Ran GTPase-activating protein 1 yes yes 2;3 8.004E-80 146.16 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 107130000 14392000 12455000 18085000 8372300 30772000 23049000 3354 921 3392 14924;14925;14926;14927;14928;14929;14930;14931;14932;14933;14934;14935 9883;9884;9885;9886;9887;9888;9889;9890 9886 8 ILAAIIMK QPSLLGRKILAAIIMK ILAAIIMKKDSEDMGV K I L M K K 2 0 0 0 0 0 0 0 0 3 1 1 1 0 0 0 0 0 0 0 0 8 0 871.5565 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 868 875 ADAR Double-stranded RNA-specific adenosine deaminase no no 2 0.0086462 102.71 By matching By matching By matching By matching By MS/MS By matching 1 133040000 0 0 0 0 133040000 0 3355 352;968 3393 14936 9891 9891 1 ILAAIIMKK QPSLLGRKILAAIIMK LAAIIMKKDSEDMGVV K I L K K D 2 0 0 0 0 0 0 0 0 3 1 2 1 0 0 0 0 0 0 0 0 9 1 999.65146 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 868 876 ADAR Double-stranded RNA-specific adenosine deaminase no no 2 5.4758E-11 120.46 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 32889000 0 1714800 21319000 0 576980 9277600 3356 352;968 3394 14937;14938;14939;14940 9892;9893 9893 2 ILADLNQQAPAPAPAERR ASLFVVARILADLNQQ APAPAERREGAAARKA R I L R R E 5 2 1 1 0 2 1 0 0 1 2 0 0 0 3 0 0 0 0 0 0 18 1 1930.0385 Q9Y2Y9 Q9Y2Y9 67 84 KLF13 Krueppel-like factor 13 yes yes 3 0.0018818 49.265 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 20274000 1216600 4465200 3108200 616480 1921000 8946500 3357 1641 3395 14941;14942;14943;14944;14945;14946 9894;9895;9896 9896 3 ILADQQDKYMK YDAKSSAKILADQQDK DQQDKYMK________ K I L M K - 1 0 0 2 0 2 0 0 0 1 1 2 1 0 0 0 0 0 1 0 0 11 1 1351.6806 Q9Y265;H7C4G5 Q9Y265 446 456 RUVBL1 RuvB-like 1 yes no 2;3 2.1918E-70 148.32 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 3 2 46705000 12356000 3877100 7727900 4765100 8983300 8995400 3358 1629 3396 14947;14948;14949;14950;14951;14952;14953;14954;14955;14956;14957;14958;14959;14960 9897;9898;9899;9900;9901;9902;9903;9904;9905;9906;9907;9908;9909 9900 13 ILAFPCNQFGKQEPGSNEEIK RYAECGLRILAFPCNQ PGSNEEIKEFAAGYNV R I L I K E 1 0 2 0 1 2 3 2 0 2 1 2 0 2 2 1 0 0 0 0 0 21 1 2405.1685 P36969-2;P36969 P36969-2 70 90 GPX4 Phospholipid hydroperoxide glutathione peroxidase, mitochondrial yes no 3 0.016304 37.925 By matching By matching By matching By MS/MS By matching By matching 1 5897000 0 0 0 5897000 0 0 3359 902 3397 14961 9910 9910 1 ILAGLGFDPEMQNRPTQK AAEAKARRILAGLGFD MQNRPTQKFSGGWRMR R I L Q K F 1 1 1 1 0 2 1 2 0 1 2 1 1 1 2 0 1 0 0 0 0 18 1 2014.0306 E9PC67;F8VQZ0;Q8NE71;Q8NE71-2;H0YGW7 Q8NE71 434 451 ABCF1 ATP-binding cassette sub-family F member 1 no no 3 0.024377 71.08 By matching By matching By matching By matching By MS/MS By matching 1 8568800 0 0 0 0 8568800 0 3360 1321;411 3398 14962 9911 9911 0 ILAQDVAQLKEK NDLLEDRKILAQDVAQ DVAQLKEKKESGENPP K I L E K K 2 0 0 1 0 2 1 0 0 1 2 2 0 0 0 0 0 0 0 1 0 12 1 1354.782 O95239;O95239-2;F5H4Q9 O95239 773 784 KIF4A Chromosome-associated kinesin KIF4A yes no 2;3 2.2871E-27 124.39 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 2 2 61561000 6079600 10400000 9225400 1718800 10227000 23911000 3361 768 3399 14963;14964;14965;14966;14967;14968;14969;14970;14971;14972;14973 9912;9913;9914;9915;9916;9917;9918;9919;9920 9917 9 ILAQITGTEHLK TTQSRSFRILAQITGT ITGTEHLKESEADNTK R I L L K E 1 0 0 0 0 1 1 1 1 2 2 1 0 0 0 0 2 0 0 0 0 12 0 1322.7558 H0Y8Y3;F5H7Y0;E9PBF5;Q96HC4-4;Q96HC4;D6RB78;H0YBI4;Q96HC4-3;F5H0X8;Q96HC4-2;D3YTJ1 H0Y8Y3 28 39 PDLIM5 PDZ and LIM domain protein 5 yes no 3 0.0015045 80.17 By MS/MS By matching By matching By matching By matching By matching 1 604070 604070 0 0 0 0 0 3362 405 3400 14974 9921 9921 1 ILATAGWDHRIR VTIRPDRKILATAGWD AGWDHRIRVFHWRTMQ K I L I R V 2 2 0 1 0 0 0 1 1 2 1 0 0 0 0 0 1 1 0 0 0 12 1 1407.7735 Q9BYB4 Q9BYB4 267 278 GNB1L Guanine nucleotide-binding protein subunit beta-like protein 1 yes yes 3 0.0030822 72.2 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 8441100 0 0 1235900 651160 936320 5617800 3363 1467 3401 14975;14976;14977;14978 9922;9923;9924 9924 3 ILCEQCMTSNQK WKQEKNGKILCEQCMT QCMTSNQKKALKAEHT K I L Q K K 0 0 1 0 2 2 1 0 0 1 1 1 1 0 0 1 1 0 0 0 0 12 0 1510.6578 Q8WXI9 Q8WXI9 439 450 GATAD2B Transcriptional repressor p66-beta yes yes 2 1.0436E-63 138.2 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 163460000 5096100 26170000 66361000 2588100 3671800 59571000 3364 1344 3402 14979;14980;14981;14982;14983;14984;14985 9925;9926;9927;9928;9929;9930;9931;9932;9933;9934 9930 10 ILCEQCMTSNQKK WKQEKNGKILCEQCMT CMTSNQKKALKAEHTN K I L K K A 0 0 1 0 2 2 1 0 0 1 1 2 1 0 0 1 1 0 0 0 0 13 1 1638.7528 Q8WXI9 Q8WXI9 439 451 GATAD2B Transcriptional repressor p66-beta yes yes 2;3 2.8129E-46 129.54 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 1 2 68514000 1790100 7999000 25656000 838610 2302800 29928000 3365 1344 3403 14986;14987;14988;14989;14990;14991;14992;14993;14994;14995 9935;9936;9937;9938;9939;9940 9938 6 ILCKSPQSDPADTPTNTK TDEKTTKKILCKSPQS ADTPTNTKQRPKRSLK K I L T K Q 1 0 1 2 1 1 0 0 0 1 1 2 0 0 3 2 3 0 0 0 0 18 1 1971.9572 P46013;F5H4V4;P46013-2 P46013 1857 1874 MKI67 Antigen KI-67 no no 2;3 0.0015913 60.09 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 2 36822000 3534900 5937800 5741400 2491300 5823200 13293000 3366 919;920 3404 14996;14997;14998;14999;15000;15001;15002 9941;9942;9943;9944;9945;9946;9947 9943 7 ILDDSDSNLSVVK KTRGYLIKILDDSDSN DSNLSVVKKLPVPLES K I L V K K 0 0 1 3 0 0 0 0 0 1 2 1 0 0 0 3 0 0 0 2 0 13 0 1403.7144 Q7Z3J3;B4DZH4 Q7Z3J3 722 734 RGPD4 RanBP2-like and GRIP domain-containing protein 4 no no 2 5.3906E-09 101.43 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 8152800 1551600 2735100 1028600 853480 0 1984100 3367 1251 3405 15003;15004;15005;15006;15007 9948;9949;9950 9950 3 ILDDTEDTVVSQRK GVKVADRKILDDTEDT DTVVSQRKKIQINQEE K I L R K K 0 1 0 3 0 1 1 0 0 1 1 1 0 0 0 1 2 0 0 2 0 14 1 1617.821 Q5TCT4;P42696-2;A2A2V2;P42696 Q5TCT4 186 199 RBM34 RNA-binding protein 34 yes no 3 0.00057258 74.537 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 4047000 1145100 0 733940 0 1529000 638880 3368 3 3406 15008;15009;15010;15011 9951;9952;9953;9954 9954 4 ILDEIEEHNIK ERERLKKRILDEIEEH EIEEHNIKIYHLPDAE R I L I K I 0 0 1 1 0 0 3 0 1 3 1 1 0 0 0 0 0 0 0 0 0 11 0 1351.6983 C9J2Q4;H7C2Y0;B5MCX3;Q15019;Q15019-2 C9J2Q4 159 169 SEPT2 Septin-2 yes no 3 0.033726 48.188 By matching By matching By matching By matching By matching By MS/MS 1 1511100 0 0 0 0 0 1511100 3369 172 3407 15012 9955 9955 1 ILDILGETCK LLEPENEKILDILGET DILGETCKSEPVKEES K I L C K S 0 0 0 1 1 0 1 1 0 2 2 1 0 0 0 0 1 0 0 0 0 10 0 1160.6111 Q14151;A8MXT5;C9JPX0;Q15424;F5H1L1;F5H0H3;F5GZU3;B7Z2F6 Q14151 216 225 SAFB2;SAFB Scaffold attachment factor B2;Scaffold attachment factor B1 no no 2 3.041E-09 117.02 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 308460000 0 0 0 40214000 268240000 0 3370 1097;1137 3408 15013;15014 9956;9957 9957 2 ILDLLNEGSAR LLAHGRQKILDLLNEG LLNEGSARDLRSLQRI K I L A R D 1 1 1 1 0 0 1 1 0 1 3 0 0 0 0 1 0 0 0 0 0 11 0 1199.651 Q14807;B7Z265;H3BRB3 Q14807 592 602 KIF22 Kinesin-like protein KIF22 yes no 2 0.0023184 95.477 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 3371 1115 3409 15015 9958 9958 1 ILDVMYSR TKKMGYYKILDVMYSR ILDVMYSRLPKDDVHA K I L S R L 0 1 0 1 0 0 0 0 0 1 1 0 1 0 0 1 0 0 1 1 0 8 0 995.511 P78527;E7EUY0;P78527-2 P78527 1876 1883 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.014419 88.819 By matching By matching By matching By matching By matching By MS/MS 1 1 3300400 0 590390 0 0 0 2710000 3372 1012 3410 15016;15017 9959 9959 1 ILDVMYSRLPK TKKMGYYKILDVMYSR VMYSRLPKDDVHAKES K I L P K D 0 1 0 1 0 0 0 0 0 1 2 1 1 0 1 1 0 0 1 1 0 11 1 1333.7428 P78527;E7EUY0;P78527-2 P78527 1876 1886 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2;3 3.4056E-12 113.38 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 2 1 157110000 0 57142000 37271000 44162000 18533000 0 3373 1012 3411 15018;15019;15020;15021;15022 9960;9961;9962;9963 9961 4 ILDVMYSRLPKDDVHAK TKKMGYYKILDVMYSR PKDDVHAKESKINQVF K I L A K E 1 1 0 3 0 0 0 0 1 1 2 2 1 0 1 1 0 0 1 2 0 17 2 1999.0561 P78527;E7EUY0;P78527-2 P78527 1876 1892 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3;4;5 0.00014128 86.214 By MS/MS By matching By MS/MS By matching By matching By MS/MS 2 1 1 35036000 21584000 0 6970500 0 0 6481400 3374 1012 3412 15023;15024;15025;15026 9964;9965;9966;9967 9966 4 ILEAELAVEQK PEEMPVDRILEAELAV AELAVEQKSDQGGSQH R I L Q K S 2 0 0 0 0 1 3 0 0 1 2 1 0 0 0 0 0 0 0 1 0 11 0 1241.6867 F8VZR5;F8VNP5;P28702;Q5STQ1;E9PK95;B7Z3E4 F8VZR5 165 175 RXRB Retinoic acid receptor RXR-beta yes no 2 0.025814 82.494 By matching By matching By matching By matching By matching By MS/MS 1 703070 0 0 0 0 0 703070 3375 533 3413 15027 9968 9968 0 ILEASQLK RFCSEPQKILEASQLK ILEASQLKETLQAVPK K I L L K E 1 0 0 0 0 1 1 0 0 1 2 1 0 0 0 1 0 0 0 0 0 8 0 900.52803 O00411 O00411 1198 1205 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 2 4.9559E-09 120.46 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 7214100 770190 965120 1058200 586030 1247600 2587000 3376 690 3414 15028;15029;15030;15031;15032;15033 9969 9969 1 ILEDVVGVPEK HSRPCPTKILEDVVGV DVVGVPEKKVLPITVP K I L E K K 0 0 0 1 0 0 2 1 0 1 1 1 0 0 1 0 0 0 0 3 0 11 0 1196.6653 Q9ULW0;Q96RR5 Q9ULW0 466 476 TPX2;HCA90 Targeting protein for Xklp2 yes no 2 0.017295 72.731 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 3377 1611 3415 15034 9970 9970 1 ILEDVVGVPEKK HSRPCPTKILEDVVGV VVGVPEKKVLPITVPK K I L K K V 0 0 0 1 0 0 2 1 0 1 1 2 0 0 1 0 0 0 0 3 0 12 1 1324.7602 Q9ULW0;Q96RR5 Q9ULW0 466 477 TPX2;HCA90 Targeting protein for Xklp2 yes no 2;3 1.1092E-17 116.71 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 3 3 319840000 41647000 56443000 53662000 13937000 19874000 134270000 3378 1611 3416 15035;15036;15037;15038;15039;15040;15041;15042;15043;15044;15045;15046;15047;15048 9971;9972;9973;9974;9975;9976;9977;9978;9979;9980;9981;9982 9977 11 ILEHMPVSNQKPDTDEAEDPEK GFEPDVQKILEHMPVS DEAEDPEKMLANFESG K I L E K M 1 0 1 3 0 1 4 0 1 1 1 2 1 0 3 1 1 0 0 1 0 22 1 2521.1642 Q9BUQ8 Q9BUQ8 566 587 DDX23 Probable ATP-dependent RNA helicase DDX23 yes yes 4 1.0131E-05 61.139 By matching By MS/MS By matching By matching By matching By matching 1 1 2557700 0 1302800 0 0 0 1254800 3379 1452 3417 15049;15050 9983;9984 9984 2 ILELSGSSSEDSEK IEEDKARRILELSGSS SSSEDSEKVIAGLYQR R I L E K V 0 0 0 1 0 0 3 1 0 1 2 1 0 0 0 5 0 0 0 0 0 14 0 1479.694 P78527;E7EUY0;P78527-2 P78527 3359 3372 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 6.6201E-104 145.52 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 35713000 563640 8566400 2256800 1793700 7453700 15078000 3380 1012 3418 15051;15052;15053;15054;15055;15056 9985;9986 9985 1 ILEMNDKYVK QIKVLQQRILEMNDKY EMNDKYVKKETCHQST R I L V K K 0 0 1 1 0 0 1 0 0 1 1 2 1 0 0 0 0 0 1 1 0 10 1 1251.6533 Q14149 Q14149 731 740 MORC3 MORC family CW-type zinc finger protein 3 yes yes 3 0.024349 60.398 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4952200 0 821160 641510 0 0 3489500 3381 1096 3419 15057;15058;15059 9987 9987 1 ILENAASAQK DYEEWKRKILENAASA ENAASAQKATAE____ K I L Q K A 3 0 1 0 0 1 1 0 0 1 1 1 0 0 0 1 0 0 0 0 0 10 0 1043.5611 Q9Y5N6;H3BT22 Q9Y5N6 239 248 ORC6 Origin recognition complex subunit 6 yes no 2 0.0029051 94.692 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 7433500 1778300 1540700 0 0 0 4114500 3382 1655 3420 15060;15061;15062 9988;9989 9988 2 ILEQQQAAK GTTPRTRKILEQQQAA LEQQQAAKGLHRTSVF K I L A K G 2 0 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 9 0 1027.5662 Q8N9M1-3;Q8N9M1-2;Q8N9M1 Q8N9M1-3 85 93 C19orf47 Uncharacterized protein C19orf47 yes no 2 0.034299 62.582 By matching By matching By MS/MS By matching By matching By matching 1 429640 0 0 429640 0 0 0 3383 1310 3421 15063 9990 9990 1 ILEREGEENEALHK KECCSQCKILEREGEE EENEALHKMIANEQKT K I L H K M 1 1 1 0 0 0 5 1 1 1 2 1 0 0 0 0 0 0 0 0 0 14 1 1665.8322 Q86UV5;Q86UV5-2;B7ZKS7;Q86UV5-5 Q86UV5 697 710 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes no 3 0.00033359 88.282 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 24995000 1128200 2146600 9859400 1988000 4809000 5064100 3384 1264 3422 15064;15065;15066;15067;15068;15069 9991;9992;9993 9992 3 ILESHQFSPHNHAK GNFRELYKILESHQFS FSPHNHAKLQQLWLKA K I L A K L 1 0 1 0 0 1 1 0 3 1 1 1 0 1 1 2 0 0 0 0 0 14 0 1643.8168 Q9NPC8 Q9NPC8 69 82 SIX2 Homeobox protein SIX2 yes yes 3;4 0.00079462 85.672 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 49561000 0 7824800 14221000 4047900 0 23468000 3385 1525 3423 15070;15071;15072;15073;15074;15075;15076;15077 9994;9995;9996;9997;9998;9999;10000 9998 7 ILESHQFSPHNHPK GNFRELYKILESHQFS FSPHNHPKLQQLWLKA K I L P K L 0 0 1 0 0 1 1 0 3 1 1 1 0 1 2 2 0 0 0 0 0 14 0 1669.8325 Q15475 Q15475 69 82 SIX1 Homeobox protein SIX1 yes yes 3;4 3.3449E-05 92.781 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 2 25053000 0 3268400 2935500 4075000 8160300 6613700 3386 1139 3424 15078;15079;15080;15081;15082;15083;15084;15085;15086 10001;10002;10003;10004;10005;10006 10006 6 ILESVAEGR KQLKEEEKILESVAEG LESVAEGRALMSVKEM K I L G R A 1 1 0 0 0 0 2 1 0 1 1 0 0 0 0 1 0 0 0 1 0 9 0 972.52401 D6RGI7;Q9UJV9;H0YA06 D6RGI7 116 124 DDX41 Probable ATP-dependent RNA helicase DDX41 yes no 2 0.037456 61.161 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 10083000 0 1746800 2055100 0 2339900 3941100 3387 328 3425 15087;15088;15089;15090 10007;10008 10007 2 ILGPIPQHMIQK EHLAMMERILGPIPQH IPQHMIQKTRKRKYFH R I L Q K T 0 0 0 0 0 2 0 1 1 3 1 1 1 0 2 0 0 0 0 0 0 12 0 1373.7853 Q9HAZ1 Q9HAZ1 392 403 CLK4 Dual specificity protein kinase CLK4 yes yes 3 0.0030287 68.786 By matching By matching By matching By matching By matching By MS/MS 1 1 5827000 0 0 0 716660 0 5110300 3388 1515 3426 15091;15092 10009;10010 10009 2 ILGPIPSHMIHR EHLVMMEKILGPIPSH IPSHMIHRTRKQKYFY K I L H R T 0 1 0 0 0 0 0 1 2 3 1 0 1 0 2 1 0 0 0 0 0 12 0 1369.7653 P49761-1;P49761;P49761-3;G5E959;H3BRW2;H3BNQ5;H3BRE4 P49761-1 389 400 CLK3 Dual specificity protein kinase CLK3 yes no 3 1.9149E-37 127.51 By matching By matching By matching By matching By matching By MS/MS 1 1 8939100 0 0 0 1130500 0 7808600 3389 944 3427 15093;15094 10011 10011 1 ILGPQGNTIK PKFNFVGKILGPQGNT GPQGNTIKRLQEETGA K I L I K R 0 0 1 0 0 1 0 2 0 2 1 1 0 0 1 0 1 0 0 0 0 10 0 1039.6026 Q07666;Q07666-2;E7ET98 Q07666 176 185 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 2 0.0030827 92.239 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 401240000 78630000 51872000 65278000 40290000 51182000 113990000 3390 1045 3428 15095;15096;15097;15098;15099;15100;15101 10012;10013;10014;10015;10016;10017;10018 10012 7 ILGRYYETGSIRPR VSNGCVSKILGRYYET ETGSIRPRAIGGSKPR K I L P R A 0 3 0 0 0 0 1 2 0 2 1 0 0 0 1 1 1 0 2 0 0 14 2 1679.9107 P26367;G3V3Q9;P26367-2 P26367 56 69 PAX6 Paired box protein Pax-6 no no 4 0.0058928 54.023 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 78233000 1403400 0 0 0 14704000 62126000 3391 877;878 3429 15102;15103;15104 10019;10020 10020 2 ILGSLYAASEDQEK PNNYETMKILGSLYAA AASEDQEKRDIAKGHL K I L E K R 2 0 0 1 0 1 2 1 0 1 2 1 0 0 0 2 0 0 1 0 0 14 0 1522.7515 Q6PD62 Q6PD62 380 393 CTR9 RNA polymerase-associated protein CTR9 homolog yes yes 2 0.0011066 74.133 By matching By matching By matching By matching By matching By MS/MS 1 1 4060300 0 2793400 0 0 0 1267000 3392 1229 3430 15105;15106 10021 10021 1 ILGVDKNASEDEIKK SKRKDYYKILGVDKNA ASEDEIKKAYRKRALM K I L K K A 1 0 1 2 0 0 2 1 0 2 1 3 0 0 0 1 0 0 0 1 0 15 2 1657.8887 Q99615;Q7Z784 Q99615 385 399 DNAJC7 DnaJ homolog subfamily C member 7 yes no 3 0.0077211 59.225 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 3226700 1156500 626320 755850 0 688090 0 3393 1430 3431 15107;15108;15109;15110 10022 10022 1 ILHVNGFNGDEK STIVKQMRILHVNGFN NGFNGDEKATKVQDIK R I L E K A 0 0 2 1 0 0 1 2 1 1 1 1 0 1 0 0 0 0 0 1 0 12 0 1341.6677 P63092-3;H0Y7F4 P63092-3 62 73 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short yes no 3 0.0015134 81.565 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 1 14371000 0 5804900 3035100 0 0 5531100 3394 1002 3432 15111;15112;15113;15114 10023;10024 10023 2 ILHVNGFNGDSEK STIVKQMRILHVNGFN GFNGDSEKATKVQDIK R I L E K A 0 0 2 1 0 0 1 2 1 1 1 1 0 1 0 1 0 0 0 1 0 13 0 1428.6997 P63092-2;Q5JWF2-2 P63092-2 62 74 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 3 0.0011118 87.641 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 16266000 1137700 2466900 4488600 1631100 0 6541600 3395 1001 3433 15115;15116;15117;15118;15119 10025;10026;10027;10028;10029;10030;10031 10027 7 ILHVNGFNGEGGEEDPQAAR STIVKQMRILHVNGFN EEDPQAARSNSDGEKA R I L A R S 2 1 2 1 0 1 3 4 1 1 1 0 0 1 1 0 0 0 0 1 0 20 0 2108.9875 P63092;Q5JWD1;A6NI00;Q5JWF2;H0Y7E8;Q5JWE9 P63092 62 81 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 3 6.7537E-11 90.442 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 5432900 603720 1233500 1430100 0 0 2165500 3396 1000 3434 15120;15121;15122;15123 10032;10033 10032 2 ILHVNGFNGEGGEEDPQAARSNSDGEK STIVKQMRILHVNGFN RSNSDGEKATKVQDIK R I L E K A 2 1 3 2 0 1 4 5 1 1 1 1 0 1 1 2 0 0 0 1 0 27 1 2826.2805 P63092;Q5JWF2 P63092 62 88 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 4 5.0143E-06 55.631 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 8759300 0 0 3261000 0 0 5498300 3397 1000 3435 15124;15125 10034;10035 10035 1 ILIANTGMDTDKIK PKRIENAKILIANTGM GMDTDKIKIFGSRVRV K I L I K I 1 0 1 2 0 0 0 1 0 3 1 2 1 0 0 0 2 0 0 0 0 14 1 1531.828 P78371-2;P78371;F8VQ14;F5GWF6 P78371-2 190 203 CCT2 T-complex protein 1 subunit beta yes no 3 0.013477 48.527 By MS/MS By matching By matching By matching By matching By matching 1 2437600 2437600 0 0 0 0 0 3398 1010 3436 15126 10036 10036 1 ILIATDVASR KFKSSIYRILIATDVA IATDVASRGLDIPTVQ R I L S R G 2 1 0 1 0 0 0 0 0 2 1 0 0 0 0 1 1 0 0 1 0 10 0 1057.6132 Q9Y6V7;Q9BVQ8 Q9Y6V7 301 310 DDX49 Probable ATP-dependent RNA helicase DDX49 yes no 2 5.0572E-09 115.7 By matching By matching By matching By matching By matching By MS/MS 1 2758000 0 0 0 0 0 2758000 3399 1662 3437 15127 10037 10037 1 ILIENGVAERQR KKVDNRIRILIENGVA NGVAERQRSLFVVVGD R I L Q R S 1 2 1 0 0 1 2 1 0 2 1 0 0 0 0 0 0 0 0 1 0 12 1 1396.7787 Q9H0A0;E9PJN6;E9PMU0 Q9H0A0 12 23 NAT10 N-acetyltransferase 10 yes no 3 0.036448 45.764 By matching By matching By matching By matching By MS/MS By matching 1 2 1 4959200 0 0 287970 0 3631900 1039300 3400 1477 3438 15128;15129;15130;15131 10038 10038 1 ILIFSSR GKWKNKERILIFSSRG RILIFSSRGINFRTRH R I L S R G 0 1 0 0 0 0 0 0 0 2 1 0 0 1 0 2 0 0 0 0 0 7 0 834.49634 Q8TDN6 Q8TDN6 62 68 BRIX1 Ribosome biogenesis protein BRX1 homolog yes yes 2 4.5651E-19 130.77 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 3401 1337 3439 15132 10039 10039 1 ILKQVSGGEDEIQQLQK MDQGSIERILKQVSGG DEIQQLQKALLDYLDE R I L Q K A 0 0 0 1 0 4 2 2 0 2 2 2 0 0 0 1 0 0 0 1 0 17 1 1912.0266 Q6KC79-2;Q6KC79 Q6KC79-2 1637 1653 NIPBL Nipped-B-like protein yes no 3 0.0028109 62.203 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5698500 1930100 1336200 0 0 0 2432300 3402 1222 3440 15133;15134;15135 10040 10040 1 ILLDPNSEEVSEK SRQETEEKILLDPNSE NSEEVSEKDAKQIIET K I L E K D 0 0 1 1 0 0 3 0 0 1 2 1 0 0 1 2 0 0 0 1 0 13 0 1471.7406 P51531-2;P51531 P51531-2 660 672 SMARCA2 Probable global transcription activator SNF2L2 yes no 2 2.0063E-15 109.44 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 25682000 9842600 5976900 0 2628200 0 7234700 3403 951 3441 15136;15137;15138;15139;15140 10041;10042;10043;10044;10045;10046;10047 10047 7 ILLQSKNAGAVIGK TDEMVELRILLQSKNA NAGAVIGKGGKNIKAL R I L G K G 2 0 1 0 0 1 0 2 0 2 2 2 0 0 0 1 0 0 0 1 0 14 1 1410.8558 P61978-3;P61978-2;B4DFF1;P61978;Q5T6W2 P61978-3 47 60 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 3 0.0012024 70.889 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3616800 454370 1177600 0 0 0 1984800 3404 984 3442 15141;15142;15143 10048 10048 1 ILLVDSPGMGNADDEQQEEGTSSKQVVK KPTHEDSKILLVDSPG TSSKQVVKQGLQERSK K I L V K Q 1 0 1 3 0 3 3 3 0 1 2 2 1 0 1 3 1 0 0 3 0 28 1 2973.4237 Q9UKN8 Q9UKN8 606 633 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 3 9.7993E-30 86.08 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 56162000 9225300 0 21886000 11505000 2590000 10955000 3405 1602 3443 15144;15145;15146;15147;15148;15149 10049;10050;10051;10052;10053;10054;10055 10052 7 ILNDLSSDAPGVPRIEEEK SRRPSYRKILNDLSSD VPRIEEEKSEEETSAL K I L E K S 1 1 1 2 0 0 3 1 0 2 2 1 0 0 2 2 0 0 0 1 0 19 1 2081.0641 P16220-3;P16220-2;P16220;C9J4L5;B7Z7P1;C9JBT4;H7C3I0;E7EWP8;F5H0V3;C9J896 P16220-3 137 155 CREB1 Cyclic AMP-responsive element-binding protein 1 yes no 3 0.00055769 75.564 By matching By matching By matching By MS/MS By matching By matching 1 10877000 0 0 0 10877000 0 0 3406 841 3444 15150 10056 10056 1 ILNEMRDQYEK APGVDLSRILNEMRDQ EMRDQYEKMAEKNRKD R I L E K M 0 1 1 1 0 1 2 0 0 1 1 1 1 0 0 0 0 0 1 0 0 11 1 1437.6922 P02533;CON__P02533;CON__Q6IFX2;Q04695;CON__Q04695;F5GWP8 P02533 283 293 KRT14;KRT17;JUP Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 3 0.034675 50.194 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 4897700 0 664120 1342500 1842600 290070 758350 + 3407 286;304;485 3445 15151;15152;15153;15154;15155 10057 10057 1 ILNFLMHPKPSGKPLPK VNSELVKRILNFLMHP PSGKPLPKSKKTCSKG R I L P K S 0 0 1 0 0 0 0 1 1 1 3 3 1 1 4 1 0 0 0 0 0 17 2 1916.107 P35659;P35659-2;B4DFG0;H0Y8X0 P35659 179 195 DEK Protein DEK yes no 4 0.00052873 82.529 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 14440000 0 0 0 4033800 0 10406000 3408 901 3446 15156;15157 10058;10059 10059 2 ILNREVVNYVQK DSHSLNNKILNREVVN EVVNYVQKRNSQISNE K I L Q K R 0 1 2 0 0 1 1 0 0 1 1 1 0 0 0 0 0 0 1 3 0 12 1 1473.8304 Q9H9A7 Q9H9A7 442 453 RMI1 RecQ-mediated genome instability protein 1 yes yes 3 0.0018546 81.92 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 15738000 1915100 0 3782300 1508500 1819200 6712500 3409 1506 3447 15158;15159;15160;15161;15162 10060;10061;10062 10062 3 ILNTSPDGHPYEK CDHNNCGKILNTSPDG PDGHPYEKIHTAEKQY K I L E K I 0 0 1 1 0 0 1 1 1 1 1 1 0 0 2 1 1 0 1 0 0 13 0 1469.7151 Q16600 Q16600 187 199 ZNF239 Zinc finger protein 239 yes yes 2;3 0.0036874 62.162 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 2 2 1 1 1 15023000 2882300 2089200 2550900 1486000 2682600 3331700 3410 1154 3448 15163;15164;15165;15166;15167;15168;15169;15170;15171 10063;10064;10065;10066;10067 10067 5 ILPAAALASEHSK PFRDSDNKILPAAALA ALASEHSKGTSSIAIT K I L S K G 4 0 0 0 0 0 1 0 1 1 2 1 0 0 1 2 0 0 0 0 0 13 0 1306.7245 Q7Z6E9;Q7Z6E9-2;H3BSK8 Q7Z6E9 436 448 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 2;3 2.7248E-15 107.17 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 2 2 1 2 37562000 4168800 9468600 4110300 4517900 5823400 9472900 3411 1255 3449 15172;15173;15174;15175;15176;15177;15178;15179;15180;15181 10068;10069;10070;10071;10072 10069 5 ILPNGPKAPVTGYVR PKGKKRKKILPNGPKA APVTGYVRFLNERREQ K I L V R F 1 1 1 0 0 0 0 2 0 1 1 1 0 0 3 0 1 0 1 2 0 15 1 1580.9039 C9K049;C9J8X5;Q9P0W2-3;Q9P0W2;C9JQA7 C9K049 79 93 HMG20B SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related yes no 3 0.004818 53.491 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 6500800 1068000 620790 0 787830 0 4024200 3412 235 3450 15182;15183;15184;15185 10073;10074;10075 10073 3 ILQDGGLQVVEK SLDPCCRKILQDGGLQ GGLQVVEKQNLSKEEL K I L E K Q 0 0 0 1 0 2 1 2 0 1 2 1 0 0 0 0 0 0 0 2 0 12 0 1297.7242 O43175 O43175 22 33 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 2 0.0068973 62.298 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2399700 0 671200 0 299530 0 1429000 3413 711 3451 15186;15187;15188 10076 10076 1 ILQDGGLQVVEKQNLSK SLDPCCRKILQDGGLQ VEKQNLSKEELIAELQ K I L S K E 0 0 1 1 0 3 1 2 0 1 3 2 0 0 0 1 0 0 0 2 0 17 1 1868.0367 O43175 O43175 22 38 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 3 1.7318E-07 89.506 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 30379000 6679000 1823500 0 1239000 0 20637000 3414 711 3452 15189;15190;15191;15192 10077;10078;10079 10079 3 ILQNYDNKQVR ERGIGDIKILQNYDNK NYDNKQVRIVMRRDQV K I L V R I 0 1 2 1 0 2 0 0 0 1 1 1 0 0 0 0 0 0 1 1 0 11 1 1389.7365 P49792;E9PGT0;P0DJD0;P0DJD1;F8VYC4;Q99666;O14715;E7ES93;B4DTM4;Q7Z3J3 P49792 2359 2369 RANBP2;RGPD1;RGPD2;RGPD5;RGPD8;RGPD4 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RanBP2-like and GRIP domain-containing protein 4 no no 2 0.013225 74.533 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 3415 945;1251 3453 15193 10080 10080 1 ILQRSQAQQPQK FRDVESQKILQRSQAQ SQAQQPQKEAALSS__ K I L Q K E 1 1 0 0 0 5 0 0 0 1 1 1 0 0 1 1 0 0 0 0 0 12 1 1423.7896 Q3MHD2;Q3MHD2-2 Q3MHD2 178 189 LSM12 Protein LSM12 homolog yes no 3 0.0035565 69.721 By matching By matching By MS/MS By matching By matching By matching 1 1 1 2140000 347300 0 1487600 305080 0 0 3416 1167 3454 15194;15195;15196 10081 10081 1 ILQSLEK VTSSTARRILQSLEKM RILQSLEKMSSPLADA R I L E K M 0 0 0 0 0 1 1 0 0 1 2 1 0 0 0 1 0 0 0 0 0 7 0 829.49092 P49790;F6QR24;Q4LE47 P49790 311 317 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 2 0.010533 92.47 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 8964000 1631400 1609100 3508500 0 2215000 0 3417 531 3455 15197;15198;15199;15200 10082;10083 10083 2 ILQVRAASAPAK SQVKASEKILQVRAAS RAASAPAKGTPGKGAT K I L A K G 4 1 0 0 0 1 0 0 0 1 1 1 0 0 1 1 0 0 0 1 0 12 1 1223.735 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 297 308 TCOF1 Treacle protein no no 2 0.02867 58.098 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1972400 654960 351080 0 470930 495390 0 3418 1082;383 3456 15201;15202;15203;15204 10084 10084 1 ILQVSFK NGYRLGDKILQVSFKT KILQVSFKTNKSHK__ K I L F K T 0 0 0 0 0 1 0 0 0 1 1 1 0 1 0 1 0 0 0 1 0 7 0 833.50109 Q15717 Q15717 314 320 ELAVL1 ELAV-like protein 1 yes yes 2 0.019919 105.39 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 12847000 4711200 0 0 1289500 0 6846100 3419 1146 3457 15205;15206;15207 10085;10086 10086 2 ILQVSFKTNK NGYRLGDKILQVSFKT QVSFKTNKSHK_____ K I L N K S 0 0 1 0 0 1 0 0 0 1 1 2 0 1 0 1 1 0 0 1 0 10 1 1176.6867 Q15717 Q15717 314 323 ELAVL1 ELAV-like protein 1 yes yes 2 0.028759 71.614 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 3737700 283420 1463300 0 0 511250 1479700 3420 1146 3458 15208;15209;15210;15211 10087 10087 1 ILQVSFKTNKSHK NGYRLGDKILQVSFKT FKTNKSHK________ K I L H K - 0 0 1 0 0 1 0 0 1 1 1 3 0 1 0 2 1 0 0 1 0 13 2 1528.8726 Q15717 Q15717 314 326 ELAVL1 ELAV-like protein 1 yes yes 3 0.0063904 83.226 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 10921000 0 2819400 1737300 682140 1394000 4287700 3421 1146 3459 15212;15213;15214;15215;15216 10088;10089 10089 2 ILQVSNGCVSK ARPCDISRILQVSNGC VSNGCVSKILGRYYET R I L S K I 0 0 1 0 1 1 0 1 0 1 1 1 0 0 0 2 0 0 0 2 0 11 0 1203.6282 P26367;E9PKM0 P26367 45 55 PAX6 Paired box protein Pax-6 yes no 2 3.2932E-06 106.67 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 31879000 2110200 6566200 0 1939600 4600100 16663000 3422 877 3460 15217;15218;15219;15220;15221 10090;10091;10092;10093 10090 4 ILQYLECPQYLRK QACVQLARILQYLECP ECPQYLRKAFFPKHQD R I L R K A 0 1 0 0 1 2 1 0 0 1 3 1 0 0 1 0 0 0 2 0 0 13 1 1722.9127 Q5T280 Q5T280 145 157 C9orf114 Uncharacterized protein C9orf114 yes yes 2;3 4.9035E-59 131.79 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 129770000 0 11402000 0 27945000 0 90425000 3423 1189 3461 15222;15223;15224 10094;10095;10096 10096 3 ILRLSGKPQNAPEGYQNR GFDVEEAKILRLSGKP APEGYQNRLKVLYSQK K I L N R L 1 2 2 0 0 2 1 2 0 1 2 1 0 0 2 1 0 0 1 0 0 18 2 2040.0865 B4E1H5;Q12834 B4E1H5 106 123 CDC20 Cell division cycle protein 20 homolog yes no 4 0.00092587 68.481 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 14875000 1201700 2510700 2542300 1035500 2194800 5389900 3424 157 3462 15225;15226;15227;15228;15229;15230 10097;10098;10099;10100;10101 10099 5 ILRPWQSSETR TLREDDNRILRPWQSS PWQSSETRSITNTTVC R I L T R S 0 2 0 0 0 1 1 0 0 1 1 0 0 0 1 2 1 1 0 0 0 11 1 1371.7259 Q15637-6;Q15637-4;Q15637-3;Q15637-2;Q15637 Q15637-6 261 271 SF1 Splicing factor 1 no no 3 0.0031156 84.507 By matching By matching By MS/MS By matching By matching By matching 1 1 3884800 0 0 2311500 1573300 0 0 3425 1141 3463 15231;15232 10102 10102 1 ILRPWQSSETRSITNTTVCTK TLREDDNRILRPWQSS TNTTVCTKCGGAGHIA R I L T K C 0 2 1 0 1 1 1 0 0 2 1 1 0 0 1 3 5 1 0 1 0 21 2 2477.2697 Q15637-6;Q15637-4;Q15637-3;Q15637-2;Q15637 Q15637-6 261 281 SF1 Splicing factor 1 no no 4 0.00072871 53.536 By MS/MS By matching By matching By matching By matching By matching 1 9769000 9769000 0 0 0 0 0 3426 1141 3464 15233 10103 10103 1 ILSGVVTK GNVSIRGRILSGVVTK ILSGVVTKMKMQRTIV R I L T K M 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 1 1 0 0 2 0 8 0 815.51165 P62280 P62280 72 79 RPS11 40S ribosomal protein S11 yes yes 2 0.015503 84.743 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 2 23117000 2603100 2019600 1532300 2463300 6216700 8281700 3427 989 3465 15234;15235;15236;15237;15238;15239;15240 10104;10105 10105 2 ILTAAGSCDVVCVACEK WETVLTSRILTAAGSC VVCVACEKRMLSVFST R I L E K R 3 0 0 1 3 0 1 1 0 1 1 1 0 0 0 1 1 0 0 3 0 17 0 1851.8529 F5GYH8;F5GWE4;F5H4M2;P54198 F5GYH8 247 263 C22orf39;HIRA Protein HIRA yes no 2 0.012581 51.495 By matching By matching By matching By matching By matching By MS/MS 1 3078400 0 0 0 0 0 3078400 3428 483 3466 15241 10106 10106 0 ILTGKIVVGHAIHNDFK IARGQILKILTGKIVV HAIHNDFKALQYFHPK K I L F K A 1 0 1 1 0 0 0 2 2 3 1 2 0 1 0 0 1 0 0 2 0 17 1 1861.0574 Q9H9L3 Q9H9L3 253 269 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 yes yes 4 0.0010486 73.296 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 7688100 0 0 5390100 1586100 0 712020 3429 1509 3467 15242;15243;15244 10107;10108;10109 10109 3 ILTGTDAPK VIHVESGKILTGTDAP LTGTDAPKAGQLEAWL K I L P K A 1 0 0 1 0 0 0 1 0 1 1 1 0 0 1 0 2 0 0 0 0 9 0 914.5073 P51532-5;P51532-2;P51532-3;P51532-4;P51532;Q9HBD4;F5H0X5 P51532-5 627 635 SMARCA4 Transcription activator BRG1 yes no 2 0.006833 90.15 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 9919000 0 1716300 1630800 328310 1323600 4920000 3430 952 3468 15245;15246;15247;15248;15249 10110;10111;10112 10112 3 ILTINEDGSLGLKTPK RKQRSPAKILTINEDG SLGLKTPKSHVCEHCN K I L P K S 0 0 1 1 0 0 1 2 0 2 3 2 0 0 1 1 2 0 0 0 0 16 1 1697.9564 Q9UQR1;F5H173 Q9UQR1 154 169 ZNF148 Zinc finger protein 148 yes no 3 4.0242E-38 118.16 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 21728000 0 0 0 0 0 21728000 3431 1626 3469 15250;15251 10113;10114 10113 2 ILTTIEDLDQKK IVENDKSKILTTIEDL IEDLDQKKNQALNIAW K I L K K N 0 0 0 2 0 1 1 0 0 2 2 2 0 0 0 0 2 0 0 0 0 12 1 1415.7872 O95347-2;O95347 O95347-2 1015 1026 SMC2 Structural maintenance of chromosomes protein 2 yes no 3 2.5165E-09 103.46 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 2764900 0 978650 0 0 0 1786200 3432 770 3470 15252;15253;15254 10115;10116;10117 10116 3 ILVENPSAR APLALLHKILVENPSA LVENPSARITIPDIKK K I L A R I 1 1 1 0 0 0 1 0 0 1 1 0 0 0 1 1 0 0 0 1 0 9 0 997.55564 O14757-2;F5H7S4;O14757;E7EPP6;E9PPA5 O14757-2 151 159 CHEK1 Serine/threonine-protein kinase Chk1 yes no 2 0.006833 90.15 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 12861000 0 0 1843400 687010 1954800 8375600 3433 358 3471 15255;15256;15257;15258 10118;10119;10120 10119 3 ILVNDGDASK CGASEDRKILVNDGDA VNDGDASKARLELREE K I L S K A 1 0 1 2 0 0 0 1 0 1 1 1 0 0 0 1 0 0 0 1 0 10 0 1030.5295 Q6W2J9;Q6W2J9-4;Q6W2J9-2;H7BYY2;Q6W2J9-3 Q6W2J9 31 40 BCOR BCL-6 corepressor yes no 2 0.02 63.624 By matching By MS/MS By matching By matching By matching By matching 1 786960 0 786960 0 0 0 0 3434 1237 3472 15259 10121 10121 1 ILYNSLNDSFKR FARPELMKILYNSLND SLNDSFKRLIYPLLCR K I L K R L 0 1 2 1 0 0 0 0 0 1 2 1 0 1 0 2 0 0 1 0 0 12 1 1468.7674 Q8N5C6;Q8N5C6-2;B7Z6X7 Q8N5C6 484 495 SRBD1 S1 RNA-binding domain-containing protein 1 yes no 3 0.0028115 63.944 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 4918300 2051700 0 0 0 0 2866600 3435 1302 3473 15260;15261 10122;10123 10122 2 ILYSQCGDVMR FDRTGDGKILYSQCGD SQCGDVMRALGQNPTN K I L M R A 0 1 0 1 1 1 0 1 0 1 1 0 1 0 0 1 0 0 1 1 0 11 0 1340.6217 F8W1R7;P60660-2;P60660;G3V1V0;F8VZV5;G8JLA2;B7Z6Z4;F8VPF3;F8W1I5;P14649 F8W1R7 27 37 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B yes no 2 0.0069874 69.261 By MS/MS By matching By matching By matching By matching By matching 1 1024700 1024700 0 0 0 0 0 3436 552 3474 15262 10124 10124 1 IMASSPDMDLATVSALRK AGVLAAHKIMASSPDM ATVSALRKMGVKLTPH K I M R K M 3 1 0 2 0 0 0 0 0 1 2 1 2 0 1 3 1 0 0 1 0 18 1 1904.97 P32322;E2QRB3;A6NFM2;B4DMU0 P32322 30 47 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial;Pyrroline-5-carboxylate reductase yes no 3 0.023546 33.682 By matching By matching By matching By matching By matching By MS/MS 1 38479000 0 0 0 0 0 38479000 3437 890 3475 15263 10125 10125 1 IMCSSICK YCECYEAKIMCSSICK IMCSSICKCIGCKNFE K I M C K C 0 0 0 0 2 0 0 0 0 2 0 1 1 0 0 2 0 0 0 0 0 8 0 997.43949 Q6MZP7-3;Q6MZP7;Q6MZP7-4;Q6MZP7-2 Q6MZP7-3 397 404 LIN54 Protein lin-54 homolog yes no 2 0.026998 73.665 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 2473100 0 490240 0 327850 554520 1100500 3438 1223 3476 15264;15265;15266;15267 10126 10126 1 IMDSAQYAEFCESR ERAERQTRIMDSAQYA YAEFCESRQLSFSKKA R I M S R Q 2 1 0 1 1 1 2 0 0 1 0 0 1 1 0 2 0 0 1 0 0 14 0 1705.7076 O75486-2;O75486-3;O75486 O75486-2 176 189 SUPT3H Transcription initiation protein SPT3 homolog yes no 2 0.0026796 62.69 By matching By matching By matching By matching By matching By MS/MS 1 1 1595900 0 309010 0 0 0 1286900 3439 742 3477 15268;15269 10127 10127 1 IMGGASANEMLLSGRK CSTVMFPKIMGGASAN EMLLSGRKLTAQEACG K I M R K L 2 1 1 0 0 0 1 3 0 1 2 1 2 0 0 2 0 0 0 0 0 16 1 1633.828 Q9Y232-2;Q9Y232;Q9Y232-3;Q9Y232-4 Q9Y232-2 439 454 CDYL Chromodomain Y-like protein yes no 3 0.00010463 85.469 By matching By matching By matching By matching By matching By MS/MS 1 1 1577700 0 475970 0 0 0 1101800 3440 1628 3478 15270;15271 10128;10129;10130 10128 3 IMGGSGTETTLEK IVDKDVKKIMGGSGTE GTETTLEKQKPVSKPG K I M E K Q 0 0 0 0 0 0 2 3 0 1 1 1 1 0 0 1 3 0 0 0 0 13 0 1322.6388 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 768 780 LUZP1 Leucine zipper protein 1 yes no 2 2.7789E-09 104.17 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 5574400 0 1133400 908120 405800 1321700 1805400 3441 1265 3479 15272;15273;15274;15275;15276 10131;10132;10133;10134 10132 4 IMGPNYTPGK VSTGLKVRIMGPNYTP GPNYTPGKKEDLYLKP R I M G K K 0 0 1 0 0 0 0 2 0 1 0 1 1 0 2 0 1 0 1 0 0 10 0 1076.5325 P13639;F5H370 P13639 429 438 EEF2 Elongation factor 2 yes no 2 0.030524 57.149 By matching By matching By matching By matching By MS/MS By matching 1 1 1 2399100 0 0 299170 0 764690 1335300 3442 833 3480 15277;15278;15279 10135 10135 1 IMIMTDQDQDGSHIK LKTLRYGKIMIMTDQD DQDGSHIKGLLINFIH K I M I K G 0 0 0 3 0 2 0 1 1 3 0 1 2 0 0 1 1 0 0 0 0 15 0 1730.7968 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5;Q02880-2;Q02880;E9PCY5 Q02880-2 552 566 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta;DNA topoisomerase 2 no no 3 6.2861E-87 140.31 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 34213000 1005900 1015800 2893600 971850 4429700 23896000 3443 1035;655 3481 15280;15281;15282;15283;15284;15285 10136;10137;10138 10137 3 IMLDSSNLQHQK VFDKVKVKIMLDSSNL SSNLQHQKIRMSLVEP K I M Q K I 0 0 1 1 0 2 0 0 1 1 2 1 1 0 0 2 0 0 0 0 0 12 0 1412.7082 G3V1J5;Q9Y2L1-2;Q9Y2L1 G3V1J5 749 760 DIS3 Exosome complex exonuclease RRP44 yes no 3 0.00011349 97.734 By matching By matching By matching By matching By matching By MS/MS 1 1 2536500 590360 0 0 0 0 1946200 3444 577 3482 15286;15287 10139 10139 1 IMLQNLQER KRKKEHERIMLQNLQE MLQNLQERLERKKRIE R I M E R L 0 1 1 0 0 2 1 0 0 1 2 0 1 0 0 0 0 0 0 0 0 9 0 1143.607 Q8IWC1-2;Q8IWC1;H7BY77;Q8IWC1-3 Q8IWC1-2 659 667 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.036082 61.78 By matching By matching By matching By matching By MS/MS By matching 1 1 5359300 0 0 0 0 943980 4415400 3445 1280 3483 15288;15289 10140 10140 1 IMSCGMDHSLK DYDLLGEKIMSCGMDH CGMDHSLKLWRINSKR K I M L K L 0 0 0 1 1 0 0 1 1 1 1 1 2 0 0 2 0 0 0 0 0 11 0 1277.5566 O75530-3;O75530;O75530-2;E9PR98 O75530-3 251 261 EED Polycomb protein EED yes no 2;3 0.00016604 99.343 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 2 6626300 676920 946840 852790 367740 803550 2978400 3446 745 3484 15290;15291;15292;15293;15294;15295;15296 10141;10142;10143 10142 3 IMSLLSR IIKENAGKIMSLLSRT KIMSLLSRTVADYAVV K I M S R T 0 1 0 0 0 0 0 0 0 1 2 0 1 0 0 2 0 0 0 0 0 7 0 818.46841 Q92547 Q92547 582 588 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 2 6.9359E-08 117.93 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 11913000 0 1928700 4244600 993840 0 4745400 3447 1351 3485 15297;15298;15299;15300;15301 10144;10145;10146;10147 10147 4 INALMHALTDLRK MEWTSSSKINALMHAL HALTDLRKKNPNIKSL K I N R K K 2 1 1 1 0 0 0 0 1 1 3 1 1 0 0 0 1 0 0 0 0 13 1 1494.8341 Q14527;Q14527-2;H7C5K0 Q14527 835 847 HLTF Helicase-like transcription factor yes no 3 0.0039151 65.809 By matching By matching By matching By matching By matching By MS/MS 2 149800000 0 0 0 0 0 149800000 3448 1107 3486;3487 15302;15303 10148;10149 10149 133 2 INDALSCEYECR EQAEQLERINDALSCE LSCEYECRRRMLMKRL R I N C R R 1 1 1 1 2 0 2 0 0 1 1 0 0 0 0 1 0 0 1 0 0 12 0 1528.6286 Q52LJ0;A8MUW5 Q52LJ0 210 221 FAM98B Protein FAM98B yes no 2 0.0018212 82.202 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 4270200 0 878220 0 0 1298000 2093900 3449 46 3488 15304;15305;15306 10150;10151 10150 2 INEIRQMSGAQIK IIGRQGAKINEIRQMS QMSGAQIKIANPVEGS K I N I K I 1 1 1 0 0 2 1 1 0 3 0 1 1 0 0 1 0 0 0 0 0 13 1 1486.7926 F8VZX2;Q15366-4;Q15366-5;Q15366-3;Q15366;Q15366-2;H3BRU6;G3V0E8;B4DXP5;B4DRD7;F8VRG9;F8VWQ4;P57721-2;P57721-3;P57721-5;E9PFP8;P57721-4;P57721;H9KV40;F8VRH0;H3BSS4 F8VZX2 266 278 PCBP2;PCBP3 Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 yes no 3 1.1517E-34 122.34 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 125590000 7020700 21107000 9026600 8545800 29360000 50531000 3450 548 3489 15307;15308;15309;15310;15311;15312 10152;10153;10154;10155;10156;10157;10158 10153 7 INFVGGNK AKKTSTPKINFVGGNK INFVGGNKLQSTGNKA K I N N K L 0 0 2 0 0 0 0 2 0 1 0 1 0 1 0 0 0 0 0 1 0 8 0 847.4552 Q96KR1;B5MEH6 Q96KR1 502 509 ZFR Zinc finger RNA-binding protein yes no 2 0.017128 82.241 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 43365000 4616200 8081400 6948800 3048700 6372000 14298000 3451 1403 3490 15313;15314;15315;15316;15317;15318 10159;10160 10159 2 INFVGGNKLQSTGNK AKKTSTPKINFVGGNK KLQSTGNKAEDIKGTE K I N N K A 0 0 3 0 0 1 0 3 0 1 1 2 0 1 0 1 1 0 0 1 0 15 1 1575.8369 Q96KR1;B5MEH6 Q96KR1 502 516 ZFR Zinc finger RNA-binding protein yes no 3 0.010857 46.797 By matching By MS/MS By matching By matching By matching By matching 1 1 1 6347200 1630100 3808200 908970 0 0 0 3452 1403 3491 15319;15320;15321 10161 10161 1 INGRVAASTFSSDSK KELIGSMKINGRVAAS STFSSDSKKVYASSGD K I N S K K 2 1 1 1 0 0 0 1 0 1 0 1 0 1 0 4 1 0 0 1 0 15 1 1538.7689 Q9Y5J1;B2RAX6 Q9Y5J1 381 395 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 3 0.0013869 68.978 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3786900 0 0 0 223170 1225600 2338100 3453 1654 3492 15322;15323;15324 10162 10162 1 INHTASENEEFNKGESTSQK SVKYSVKKINHTASEN KGESTSQKVADRTKSE K I N Q K V 1 0 3 0 0 1 4 1 1 1 0 2 0 1 0 3 2 0 0 0 0 20 1 2249.0196 Q9GZR1-2;Q9GZR1;E7EQN6 Q9GZR1-2 857 876 SENP6 Sentrin-specific protease 6 yes no 4 2.146E-06 84.107 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 11704000 683810 3299900 3844800 557690 770270 2547900 3454 361 3493 15325;15326;15327;15328;15329;15330 10163;10164;10165;10166;10167 10166 5 INISEGNCPER IREESGARINISEGNC SEGNCPERIITLTGPT R I N E R I 0 1 2 0 1 0 2 1 0 2 0 0 0 0 1 1 0 0 0 0 0 11 0 1287.5877 F8VZX2;Q15366-4;Q15366-5;Q15366-3;Q15366;Q15366-2;H3BRU6;G3V0E8;B4DXP5;B4DRD7;F8W0G4;B4DLC0;F8VXH9;F8W1G6;P57721-2;P57721-3;P57721-5;E9PFP8;P57721-4;P57721;H9KV40;F8VTZ0;Q15365 Q15365 47 57 PCBP2;PCBP3;PCBP1 Poly(rC)-binding protein 2;Poly(rC)-binding protein 3;Poly(rC)-binding protein 1 no no 2 0.0013333 92.112 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 37099000 3197400 10255000 0 1763800 5711600 16171000 3455 1135;548 3494 15331;15332;15333;15334;15335;15336 10168;10169;10170;10171;10172;10173 10173 6 INKQLDECASAITK AQQDKLDKINKQLDEC ECASAITKAQVAIKTA K I N T K A 2 0 1 1 1 1 1 0 0 2 1 2 0 0 0 1 1 0 0 0 0 14 1 1589.8083 E9PD53;Q9NTJ3;Q9NTJ3-2;F5H0U7 E9PD53 884 897 SMC4 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 4 yes no 3 0.040306 39.427 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3456500 633850 1272600 0 427870 0 1122200 3456 419 3495 15337;15338;15339;15340 10174 10174 1 INPMQGSGRPEEREK ECFERSVKINPMQGSG GRPEEREKIGE_____ K I N E K I 0 2 1 0 0 1 3 2 0 1 0 1 1 0 2 1 0 0 0 0 0 15 2 1726.8421 H7C3A3 H7C3A3 83 97 TTC27 yes yes 4 0.0023656 63.185 By matching By matching By matching By matching By matching By MS/MS 1 1741100 0 0 0 0 0 1741100 3457 670 3496 15341 10175 10175 1 INQMATAPDSQRLK YYIVKQGKINQMATAP APDSQRLKLLREVAGT K I N L K L 2 1 1 1 0 2 0 0 0 1 1 1 1 0 1 1 1 0 0 0 0 14 1 1571.809 Q9UQE7 Q9UQE7 144 157 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.0013657 80.905 By MS/MS By matching By matching By matching By MS/MS By matching 2 1 1 1 1 21908000 4966700 0 2968600 2250200 3555100 8167200 3458 1625 3497 15342;15343;15344;15345;15346;15347 10176;10177 10176 2 INQPELETR AKSSSESKINQPELET NQPELETRMSTRSSKA K I N T R M 0 1 1 0 0 1 2 0 0 1 1 0 0 0 1 0 1 0 0 0 0 9 0 1098.5669 Q5FWF5;Q5FWF5-2 Q5FWF5 57 65 ESCO1 N-acetyltransferase ESCO1 yes no 2 0.039666 60.167 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 12087000 674030 1762000 2508600 891220 2528400 3722600 3459 1180 3498 15348;15349;15350;15351;15352;15353 10178 10178 1 INQQENSLTLEK MLRDLQEKINQQENSL ENSLTLEKLKLAVADL K I N E K L 0 0 2 0 0 2 2 0 0 1 2 1 0 0 0 1 1 0 0 0 0 12 0 1415.7256 P49454 P49454 544 555 CENPF Centromere protein F yes yes 2 0.0024886 74.392 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1615100 0 601590 0 0 208760 804790 3460 936 3499 15354;15355;15356 10179;10180;10181 10179 2 INQQENSLTLEKLK MLRDLQEKINQQENSL SLTLEKLKLAVADLEK K I N L K L 0 0 2 0 0 2 2 0 0 1 3 2 0 0 0 1 1 0 0 0 0 14 1 1656.9046 P49454 P49454 544 557 CENPF Centromere protein F yes yes 3 0.021066 44.968 By matching By MS/MS By matching By matching By matching By matching 1 1 1965500 0 754600 0 0 0 1210900 3461 936 3500 15357;15358 10182 10182 1 INQVFHGSCITEGNELTK DVHAKESKINQVFHGS TEGNELTKTLIKLCYD K I N T K T 0 0 2 0 1 1 2 2 1 2 1 1 0 1 0 1 2 0 0 1 0 18 0 2045.984 P78527;E7EUY0;P78527-2 P78527 1896 1913 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 2.6594E-210 164.58 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 167990000 58748000 14361000 31719000 13325000 10110000 39728000 3462 1012 3501 15359;15360;15361;15362;15363;15364 10183;10184;10185;10186;10187;10188 10188 6 INRAYEVLKDEDLR NAHGDFLKINRAYEVL VLKDEDLRKKYDKYGE K I N L R K 1 2 1 2 0 0 2 0 0 1 2 1 0 0 0 0 0 0 1 1 0 14 2 1732.9108 Q8IXB1;Q8IXB1-2;F8W884;Q3B7W8;E7EP04;Q71S60 Q8IXB1 80 93 DNAJC10 DnaJ homolog subfamily C member 10 yes no 3;4 0.0045667 62.077 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 2 2 38378000 970530 8107000 2535500 2715900 6260000 17789000 3463 1287 3502 15365;15366;15367;15368;15369;15370;15371;15372 10189;10190;10191;10192 10191 4 INSAPPTETK KTGRSLRKINSAPPTE SAPPTETKSLRIASRS K I N T K S 1 0 1 0 0 0 1 0 0 1 0 1 0 0 2 1 2 0 0 0 0 10 0 1056.5451 Q9NRL2-2;Q9NRL2;F5H239 Q9NRL2-2 1286 1295 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 2 0.0084895 82.417 By matching By matching By MS/MS By matching By matching By matching 1 412850 0 0 412850 0 0 0 3464 1536 3503 15373 10193 10193 1 INSSSVKQEATFCSQR SASGASARINSSSVKQ EATFCSQRDGDASLNK R I N Q R D 1 1 1 0 1 2 1 0 0 1 0 1 0 1 0 4 1 0 0 1 0 16 1 1840.8738 Q9NQW6;Q9NQW6-2;H7C167;H7C0Y6 Q9NQW6 248 263 ANLN Actin-binding protein anillin yes no 3 9.3678E-05 87.519 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 7311500 1251100 2149200 1545300 630890 0 1734900 3465 1533 3504 15374;15375;15376;15377;15378 10194;10195;10196;10197 10196 4 INSSSVKQEATFCSQRDGDASLNK SASGASARINSSSVKQ DGDASLNKALSSSADD R I N N K A 2 1 2 2 1 2 1 1 0 1 1 2 0 1 0 5 1 0 0 1 0 24 2 2641.2402 Q9NQW6;Q9NQW6-2;H7C167;H7C0Y6 Q9NQW6 248 271 ANLN Actin-binding protein anillin yes no 4 9.3906E-05 57.806 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 17875000 4394900 2729600 5133600 1817800 1893100 1905700 3466 1533 3505 15379;15380;15381;15382;15383;15384 10198;10199 10198 2 INSTVNKDLENRK TERVRREKINSTVNKD NKDLENRKRSRSNSHS K I N R K R 0 1 3 1 0 0 1 0 0 1 1 2 0 0 0 1 1 0 0 1 0 13 2 1529.8162 Q6PH81;H3BQL3 Q6PH81 73 85 C16orf87 UPF0547 protein C16orf87 yes no 3 0.012679 62.694 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 2324700 0 0 1286200 431000 161990 445470 3467 638 3506 15385;15386;15387;15388 10200 10200 1 INTDVQLDSQEK LAQKVESKINTDVQLD VQLDSQEKIGVKEESH K I N E K I 0 0 1 2 0 2 1 0 0 1 1 1 0 0 0 1 1 0 0 1 0 12 0 1388.6783 H7C2E8;Q9BVS5 H7C2E8 47 58 TRMT61B tRNA (adenine(58)-N(1))-methyltransferase, mitochondrial yes no 2 0.001793 78.529 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 2071400 0 543470 585030 0 0 942860 3468 669 3507 15389;15390;15391 10201;10202;10203 10202 2 INVQNNVDLGQPVK SKKAKQMKINVQNNVD VDLGQPVKNKRVFKEE K I N V K N 0 0 3 1 0 2 0 1 0 1 1 1 0 0 1 0 0 0 0 3 0 14 0 1536.826 A8MVI8;Q6NW34-2;Q6NW34;E9PFF8 A8MVI8 149 162 C3orf17 Uncharacterized protein C3orf17 yes no 2 5.7117E-30 116.9 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 7295100 4652000 1550700 0 0 0 1092500 3469 49 3508 15392;15393;15394 10204;10205;10206 10204 2 INVQNNVDLGQPVKNK SKKAKQMKINVQNNVD LGQPVKNKRVFKEESS K I N N K R 0 0 4 1 0 2 0 1 0 1 1 2 0 0 1 0 0 0 0 3 0 16 1 1778.9639 A8MVI8;Q6NW34-2;Q6NW34;E9PFF8 A8MVI8 149 164 C3orf17 Uncharacterized protein C3orf17 yes no 3 0.0023897 60.968 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 35190000 0 6311300 5734000 2477300 0 20667000 3470 49 3509 15395;15396;15397;15398 10207;10208 10208 2 INVYYNEATGGK DSDLQLERINVYYNEA YNEATGGKYVPRAVLV R I N G K Y 1 0 2 0 0 0 1 2 0 1 0 1 0 0 0 0 1 0 2 1 0 12 0 1327.6408 P68371 P68371 47 58 TUBB4B Tubulin beta-4B chain yes yes 2 0.014477 55.291 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 9216600 0 2189900 0 0 1734000 5292700 3471 1007 3510 15399;15400;15401 10209;10210 10209 2 INVYYNEATGGKYVPR DSDLQLERINVYYNEA TGGKYVPRAVLVDLEP R I N P R A 1 1 2 0 0 0 1 2 0 1 0 1 0 0 1 0 1 0 3 2 0 16 1 1842.9264 P68371 P68371 47 62 TUBB4B Tubulin beta-4B chain yes yes 3 0.0010077 80.507 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 25478000 0 2532100 5340300 0 11943000 5662800 3472 1007 3511 15402;15403;15404;15405 10211;10212;10213 10212 3 IPCKSPPPELTDTATSTK MTIDKNTKIPCKSPPP TDTATSTKRCPKTRPR K I P T K R 1 0 0 1 1 0 1 0 0 1 1 2 0 0 4 2 4 0 0 0 0 18 1 1941.9717 P46013;F5H4V4;P46013-2 P46013 2584 2601 MKI67 Antigen KI-67 no no 3 0.028842 36.214 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 7686200 0 1204700 0 250200 553350 5678000 3473 919;920 3512 15406;15407;15408;15409 10214 10214 1 IQAIAWAR GVRGTEGKIQAIAWAR IQAIAWARNQKKPFLG K I Q A R N 3 1 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 8 0 927.52904 P17812;B4DR64 P17812 382 389 CTPS1 CTP synthase 1 yes no 2 0.0066096 101.33 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 20814000 7436300 0 9326800 0 4051300 0 3474 852 3513 15410;15411;15412 10215;10216;10217 10217 3 IQAQNRVVSAPVGK NAVIFSQKIQAQNRVV VVSAPVGKETPSKRMK K I Q G K E 2 1 1 0 0 2 0 1 0 1 0 1 0 0 1 1 0 0 0 3 0 14 1 1465.8365 Q13416 Q13416 211 224 ORC2 Origin recognition complex subunit 2 yes yes 3 0.0078671 52.821 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 39950000 1933000 10065000 7622800 3538500 0 16791000 3475 1081 3514 15413;15414;15415;15416;15417 10218 10218 1 IQAQNRVVSAPVGKETPSK NAVIFSQKIQAQNRVV VGKETPSKRMKRDKTS K I Q S K R 2 1 1 0 0 2 1 1 0 1 0 2 0 0 2 2 1 0 0 3 0 19 2 2008.1065 Q13416 Q13416 211 229 ORC2 Origin recognition complex subunit 2 yes yes 3;4 9.026E-11 93.342 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 37578000 3173300 4614600 11944000 5732100 5871800 6242500 3476 1081 3515 15418;15419;15420;15421;15422;15423;15424;15425;15426;15427;15428;15429 10219;10220;10221;10222;10223;10224;10225;10226 10225 8 IQELEGQLDK LPTRALQKIQELEGQL ELEGQLDKLKKEKQQR K I Q D K L 0 0 0 1 0 2 2 1 0 1 2 1 0 0 0 0 0 0 0 0 0 10 0 1171.6085 P49454 P49454 20 29 CENPF Centromere protein F yes yes 2 0.039183 53.567 By matching By matching By matching By matching By matching By MS/MS 1 1 1282900 0 0 0 380230 0 902660 3477 936 3516 15430;15431 10227 10227 1 IQELEGQLDKLK LPTRALQKIQELEGQL EGQLDKLKKEKQQRQF K I Q L K K 0 0 0 1 0 2 2 1 0 1 3 2 0 0 0 0 0 0 0 0 0 12 1 1412.7875 P49454 P49454 20 31 CENPF Centromere protein F yes yes 3 3.9241E-09 110.98 By matching By matching By MS/MS By matching By matching By matching 1 3121900 0 0 3121900 0 0 0 3478 936 3517 15432 10228 10228 0 IQFKPDDGISPER IQNDAGVRIQFKPDDG DDGISPERAAQVMGPP R I Q E R A 0 1 0 2 0 1 1 1 0 2 0 1 0 1 2 1 0 0 0 0 0 13 1 1500.7573 Q96I24 Q96I24 287 299 FUBP3 Far upstream element-binding protein 3 yes yes 3 0.0019213 82.202 By matching By matching By MS/MS By matching By matching By matching 1 1 2641100 1055000 0 1586100 0 0 0 3479 1394 3518 15433;15434 10229 10229 1 IQFKQDDGTGPEK IQNDAGVRIQFKQDDG DDGTGPEKIAHIMGPP R I Q E K I 0 0 0 2 0 2 1 2 0 1 0 2 0 1 1 0 1 0 0 0 0 13 1 1461.71 Q92945-2;Q92945;E7EP96 Q92945-2 356 368 KHSRP Far upstream element-binding protein 2 yes no 2;3 2.2264E-109 149.82 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 3 2 2 2 2 367720000 54733000 66249000 0 21626000 93378000 131740000 3480 1366 3519 15435;15436;15437;15438;15439;15440;15441;15442;15443;15444;15445 10230;10231;10232;10233;10234;10235;10236;10237 10236 7 IQHAVQLATEPLEK DKKQMLERIQHAVQLA LATEPLEKAVQSRLTG R I Q E K A 2 0 0 0 0 2 2 0 1 1 2 1 0 0 1 0 1 0 0 1 0 14 0 1575.8621 P49589;P49589-3;P49589-2;B4DKY1;A8MVQ3 P49589 155 168 CARS Cysteine--tRNA ligase, cytoplasmic yes no 2 0.0045757 57.414 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 3308200 308270 238470 0 0 1380700 1380800 3481 938 3520 15446;15447;15448;15449 10238;10239 10239 2 IQIASESSGIPERPCVLTGTPESIEQAK IQAESGCKIQIASESS PESIEQAKRLLGQIVD K I Q A K R 2 1 0 0 1 2 4 2 0 4 1 1 0 0 3 4 2 0 0 1 0 28 1 2996.5125 Q96I24;A6NJ37;Q96I24-2 Q96I24 111 138 FUBP3 Far upstream element-binding protein 3 yes no 3 0 170.68 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 775880000 0 143390000 200730000 126280000 39522000 265950000 3482 1394 3521 15450;15451;15452;15453;15454 10240;10241;10242;10243;10244;10245 10241 6 IQIVTALDHNTQGK TEQQTGQKIQIVTALD LDHNTQGKQFILTNHD K I Q G K Q 1 0 1 1 0 2 0 1 1 2 1 1 0 0 0 0 2 0 0 1 0 14 0 1536.826 P13056-2;P13056-3;P13056 P13056-2 29 42 NR2C1 Nuclear receptor subfamily 2 group C member 1 yes no 3 0.001217 82.202 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 5605600 2883300 2722300 0 0 0 0 3483 831 3522 15455;15456 10246;10247 10246 2 IQIVTAVDASGSPK TDQQTGQKIQIVTAVD VDASGSPKQQFILTSP K I Q P K Q 2 0 0 1 0 1 0 1 0 2 0 1 0 0 1 2 1 0 0 2 0 14 0 1384.7562 C9JKS0;P49116;P49116-2;C9JMI6 C9JKS0 54 67 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes no 2 0.020662 44.968 By matching By matching By matching By matching By matching By MS/MS 1 499970 0 0 0 0 0 499970 3484 256 3523 15457 10248 10248 1 IQLQIQETLQR EEKMEVARIQLQIQET QIQETLQRQYSHHSSV R I Q Q R Q 0 1 0 0 0 4 1 0 0 2 2 0 0 0 0 0 1 0 0 0 0 11 0 1368.7725 E9PF10;O75694-2;B4DLT2;O75694 E9PF10 1089 1099 NUP155 Nuclear pore complex protein Nup155 yes no 2 2.3399E-30 130.1 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 36286000 0 30703000 0 0 0 5582800 3485 100 3524 15458;15459 10249;10250 10250 2 IQLSDSEAK MTVASEAKIQLSDSEA QLSDSEAKSHSSADDA K I Q A K S 1 0 0 1 0 1 1 0 0 1 1 1 0 0 0 2 0 0 0 0 0 9 0 989.50294 Q9Y2M0-2;Q9Y2M0;H3BQ24 Q9Y2M0-2 314 322 FAN1 Fanconi-associated nuclease 1 yes no 2 0.0060612 93.667 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 7103300 1295700 1594600 0 1534000 0 2679000 3486 1634 3525 15460;15461;15462;15463 10251 10251 1 IQNDAGVRIQFK RSGEMIKKIQNDAGVR AGVRIQFKQDDGTGPE K I Q F K Q 1 1 1 1 0 2 0 1 0 2 0 1 0 1 0 0 0 0 0 1 0 12 1 1387.7572 Q92945-2;Q92945;E7EP96;Q96I24;A6NJ37;Q96I24-2 Q92945-2 348 359 KHSRP;FUBP3 Far upstream element-binding protein 2;Far upstream element-binding protein 3 no no 3 0.0019127 84.821 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 7527600 819200 1363800 1080500 0 0 4264100 3487 1366;1394 3526 15464;15465;15466;15467 10252;10253 10252 2 IQNDAGVRIQFKQDDGTGPEK RSGEMIKKIQNDAGVR DDGTGPEKIAHIMGPP K I Q E K I 1 1 1 3 0 3 1 3 0 2 0 2 0 1 1 0 1 0 0 1 0 21 2 2315.1506 Q92945-2;Q92945;E7EP96 Q92945-2 348 368 KHSRP Far upstream element-binding protein 2 yes no 3;4 2.7513E-05 75.017 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 166740000 22755000 19989000 25747000 19646000 25870000 52730000 3488 1366 3527 15468;15469;15470;15471;15472;15473;15474;15475;15476;15477 10254;10255;10256;10257 10257 3 IQNGAQGIR QRFFSDCKIQNGAQGI QNGAQGIRFIYTREGR K I Q I R F 1 1 1 0 0 2 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 9 0 955.51993 D6RBM0;E9PCY7;P31943;G8JLB6;D6RIU0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E7EQJ0;E7EN40;D6RDL0;D6RF17 D6RBM0 36 44 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 2 0.023508 67.897 By matching By MS/MS By matching By matching By matching By matching 1 821410 0 821410 0 0 0 0 3489 322 3528 15478 10258 10258 1 IQNGAQGIRFIYTR QRFFSDCKIQNGAQGI GIRFIYTREGRPSGEA K I Q T R E 1 2 1 0 0 2 0 2 0 3 0 0 0 1 0 0 1 0 1 0 0 14 1 1635.8845 D6RBM0;E9PCY7;P31943;G8JLB6;D6RIU0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E7EQJ0;E7EN40;D6RDL0;D6RF17 D6RBM0 36 49 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 2;3 8.8052E-05 93.243 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 1 396600000 83002000 0 95727000 38444000 52330000 127100000 3490 322 3529 15479;15480;15481;15482;15483;15484;15485 10259;10260;10261;10262;10263;10264;10265;10266 10263 8 IQNGTSGIRFIYTR MRFFSDCKIQNGTSGI GIRFIYTREGRPSGEA K I Q T R E 0 2 1 0 0 1 0 2 0 3 0 0 0 1 0 1 2 0 1 0 0 14 1 1624.8685 P55795;B4DFK9 P55795 36 49 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H2, N-terminally processed yes no 3 1.1345E-07 96.82 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 48398000 0 14452000 7945400 0 5443500 20557000 3491 970 3530 15486;15487;15488;15489 10267;10268;10269 10267 3 IQQDSGCKVQISPDSGGLPER RGGEQINKIQQDSGCK DSGGLPERSVSLTGAP K I Q E R S 0 1 0 2 1 3 1 3 0 2 1 1 0 0 2 3 0 0 0 1 0 21 1 2270.0961 Q92945-2;Q92945;E7EP96 Q92945-2 170 190 KHSRP Far upstream element-binding protein 2 yes no 3 4.1252E-06 69.986 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 2 69322000 9030000 14211000 12816000 5924200 10028000 17313000 3492 1366 3531 15490;15491;15492;15493;15494;15495;15496;15497 10270;10271;10272;10273;10274;10275 10274 6 IQQDSGCKVQISPDSGGLPERSVSLTGAPESVQK RGGEQINKIQQDSGCK GAPESVQKAKMMLDDI K I Q Q K A 1 1 0 2 1 4 2 4 0 2 2 2 0 0 3 6 1 0 0 3 0 34 2 3553.7682 Q92945-2;Q92945;E7EP96 Q92945-2 170 203 KHSRP Far upstream element-binding protein 2 yes no 4 2.7801E-143 120.93 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 376280000 79769000 130780000 46090000 38040000 7037700 74560000 3493 1366 3532 15498;15499;15500;15501;15502;15503 10276;10277;10278;10279;10280;10281;10282 10278 6 IQQIIEGK KNVASPSRIQQIIEGK IQQIIEGKLFPMKALG R I Q G K L 0 0 0 0 0 2 1 1 0 3 0 1 0 0 0 0 0 0 0 0 0 8 0 927.53893 O60313;E5KLK1;E5KLJ6;E5KLJ9;O60313-2;E5KLJ5 O60313 482 489 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 2 3.0597E-09 122.19 By matching By matching By matching By matching By matching By MS/MS 1 2660200 0 0 0 0 0 2660200 3494 336 3533 15504 10283 10283 1 IQQQFSDLKRK KYRMERPKIQQQFSDL QFSDLKRKLAEVTEEE K I Q R K L 0 1 0 1 0 3 0 0 0 1 1 2 0 1 0 1 0 0 0 0 0 11 2 1389.7728 O94906-2;O94906 O94906-2 138 148 PRPF6 Pre-mRNA-processing factor 6 yes no 3 0.019404 70.412 By MS/MS By matching By matching By matching By matching By matching 1 721750 721750 0 0 0 0 0 3495 757 3534 15505 10284 10284 1 IQQQRLLDIAK RFKPLSDKIQQQRLLD QRLLDIAKKENVKISD K I Q A K K 1 1 0 1 0 3 0 0 0 2 2 1 0 0 0 0 0 0 0 0 0 11 1 1324.7827 P35249;C9JZI1 P35249 206 216 RFC4 Replication factor C subunit 4 yes no 3 0.014541 59.84 By matching By MS/MS By matching By matching By matching By matching 1 1 2101800 0 1428100 0 0 673730 0 3496 894 3535 15506;15507 10285 10285 1 IQRRGPCIIYNEDNGIIK GKMRNRRRIQRRGPCI NEDNGIIKAFRNIPGI R I Q I K A 0 2 2 1 1 1 1 2 0 5 0 1 0 0 1 0 0 0 1 0 0 18 2 2158.1317 E7EWF1;P36578;H3BM89;B4DMJ2 E7EWF1 202 219 RPL4 60S ribosomal protein L4 yes no 4 0.0023958 51.591 By matching By matching By matching By matching By matching By MS/MS 1 2277900 0 0 0 0 0 2277900 3497 392 3536 15508 10286 10286 1 IQRSNGLIHSANVR LFPGLAIKIQRSNGLI LIHSANVRTVNLEKSC K I Q V R T 1 2 2 0 0 1 0 1 1 2 1 0 0 0 0 2 0 0 0 1 0 14 1 1563.8594 B7Z6Q6;Q99661;Q5JR91 B7Z6Q6 19 32 KIF2C Kinesin-like protein KIF2C yes no 3 0.0027342 62.68 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 80238000 0 11626000 27259000 0 13078000 28274000 3498 193 3537 15509;15510;15511;15512 10287 10287 1 IQRSNGLIHSANVRTVNLEK LFPGLAIKIQRSNGLI VRTVNLEKSCVSVEWA K I Q E K S 1 2 3 0 0 1 1 1 1 2 2 1 0 0 0 2 1 0 0 2 0 20 2 2248.24 B7Z6Q6;Q99661;Q5JR91 B7Z6Q6 19 38 KIF2C Kinesin-like protein KIF2C yes no 4 0.00031255 60.542 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 29557000 5292800 5778800 11191000 279670 3265300 3749100 3499 193 3538 15513;15514;15515;15516;15517;15518 10288;10289;10290 10288 3 IQSGIFGK FLGSKSAKIQSGIFGK IQSGIFGKGSAYSRHN K I Q G K G 0 0 0 0 0 1 0 2 0 2 0 1 0 1 0 1 0 0 0 0 0 8 0 848.4756 P54132;F5H7R6;F5H3V6 P54132 1126 1133 BLM Bloom syndrome protein yes no 2 0.015951 83.206 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 5769300 298890 843570 734290 0 967390 2925200 3500 965 3539 15519;15520;15521;15522;15523 10291;10292 10291 2 IQSQFTDAQK FGDDDKRKIQSQFTDA SQFTDAQKHYQTLVIQ K I Q Q K H 1 0 0 1 0 3 0 0 0 1 0 1 0 1 0 1 1 0 0 0 0 10 0 1164.5775 P15924;P15924-2;H7BYR0 P15924 608 617 DSP Desmoplakin yes no 2 0.024554 59.84 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 9967800 0 1824000 2531800 636770 1517400 3457900 3501 840 3540 15524;15525;15526;15527;15528 10293 10293 1 IQTQPGYANTLRDAAPK PMEAAKVRIQTQPGYA TLRDAAPKMYKEEGLK R I Q P K M 3 1 1 1 0 2 0 1 0 1 1 1 0 0 2 0 2 0 1 0 0 17 1 1842.9588 F8VVM2;Q00325-2;Q00325 F8VVM2 189 205 SLC25A3 Phosphate carrier protein, mitochondrial yes no 3 0.0023672 60.246 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 9423700 2205100 3150000 636020 2482400 950230 0 3502 545 3541 15529;15530;15531;15532;15533 10294;10295;10296 10296 2 IRASETGSDEAIK QRGNITTRIRASETGS TGSDEAIKSILEQAKR R I R I K S 2 1 0 1 0 0 2 1 0 2 0 1 0 0 0 2 1 0 0 0 0 13 1 1375.6943 P39880-2;P39880;P39880-3;P39880-4 P39880-2 638 650 CUX1 Homeobox protein cut-like 1 yes no 2;3 0.0019213 82.202 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 2 2 21358000 2617000 2813900 3840900 1764400 2857700 7464300 3503 906 3542 15534;15535;15536;15537;15538;15539;15540;15541;15542;15543;15544;15545 10297;10298;10299;10300;10301 10297 5 IRAVEEQIEYLQK ADEDALRKIRAVEEQI EQIEYLQKKLAMAKQE K I R Q K K 1 1 0 0 0 2 3 0 0 2 1 1 0 0 0 0 0 0 1 1 0 13 1 1617.8726 Q5VTR2 Q5VTR2 704 716 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 3 0.00047081 93.348 By matching By matching By matching By matching By matching By MS/MS 1 1 11800000 0 860770 0 0 0 10939000 3504 1204 3543 15546;15547 10302 10302 1 IREEYPDRIMNTFSVVPSPK MGTLLISKIREEYPDR FSVVPSPKVSDTVVEP K I R P K V 0 2 1 1 0 0 2 0 0 2 0 1 1 1 3 2 1 0 1 2 0 20 2 2377.21 P68371;E7EWR1;Q5ST81;F5H894;F8VUJ7;Q5JP53;F8VYX6;F8VW92;P07437 P68371 155 174 TUBB4B;TUBB Tubulin beta-4B chain;Tubulin beta chain no no 3 0.0016183 58.29 By matching By matching By matching By matching By matching By MS/MS 1 75263000 0 0 0 0 0 75263000 3505 1007;542 3544 15548 10303 10303 1 IRGAALDVHESEPFSFAQGPLK AQALKEGRIRGAALDV SFAQGPLKDAPNLICT R I R L K D 3 1 0 1 0 1 2 2 1 1 2 1 0 2 2 2 0 0 0 1 0 22 1 2368.2175 P56545;Q5SQP8;P56545-2 P56545 290 311 CTBP2 C-terminal-binding protein 2 yes no 3 0.022167 48.896 By matching By matching By MS/MS By matching By matching By matching 1 0 0 0 0 0 0 0 3506 973 3545 15549 10304 10304 1 IRGPEESQPPQLYAADEEEAPGTRDPTR ________________ PGTRDPTRLRPVYARA R I R T R L 3 3 0 2 0 2 5 2 0 1 1 0 0 0 5 1 2 0 1 0 0 28 2 3108.4748 Q5RKV6 Q5RKV6 8 35 EXOSC6 Exosome complex component MTR3 yes yes 4 0.001049 39.079 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 5551600 2718700 0 0 0 0 2833000 3507 1185 3546 15550;15551 10305;10306 10306 2 IRITLTSRNVK EPEVAIHRIRITLTSR TLTSRNVKSLEKVCAD R I R V K S 0 2 1 0 0 0 0 0 0 2 1 1 0 0 0 1 2 0 0 1 0 11 2 1299.7987 P60866;P60866-2;E5RJX2;E5RIP1 P60866 20 30 RPS20 40S ribosomal protein S20 yes no 3 3.3758E-41 132.32 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 17238000 4485300 1090400 1562400 4492600 3760400 1846900 3508 979 3547 15552;15553;15554;15555;15556;15557 10307;10308;10309 10308 3 IRLENEIQTYR YQQLLDIKIRLENEIQ ENEIQTYRSLLEGEGS K I R Y R S 0 2 1 0 0 1 2 0 0 2 1 0 0 0 0 0 1 0 1 0 0 11 1 1433.7627 P13645;CON__P13645 P13645 440 450 KRT10 Keratin, type I cytoskeletal 10 yes no 3 0.033725 50.484 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 2848800 0 708450 1140300 519560 0 480560 + 3509 298 3548 15558;15559;15560;15561 10310 10310 1 IRLNYSDESPEAGK HHTDGLSKIRLNYSDE DESPEAGKMLEDELVD K I R G K M 1 1 1 1 0 0 2 1 0 1 1 1 0 0 1 2 0 0 1 0 0 14 1 1577.7686 Q9GZR1-2;Q9GZR1;E7EQN6 Q9GZR1-2 904 917 SENP6 Sentrin-specific protease 6 yes no 3 0.014637 47.639 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 3899700 0 1712200 0 0 0 2187500 3510 361 3549 15562;15563 10311;10312 10311 2 IRMPTKEDEEEDEPVVIK PAFALKNRIRMPTKED EDEPVVIKAQPVPHYG R I R I K A 0 1 0 2 0 0 5 0 0 2 0 2 1 0 2 0 1 0 0 2 0 18 2 2156.0671 Q9ULW0;Q96RR5 Q9ULW0 495 512 TPX2;HCA90 Targeting protein for Xklp2 yes no 3;4 0 194.05 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 3 3 3 2 126010000 14175000 11548000 67156000 11673000 0 21455000 3511 1611 3550;3551 15564;15565;15566;15567;15568;15569;15570;15571;15572;15573;15574;15575;15576;15577 10313;10314;10315;10316;10317;10318;10319;10320;10321;10322;10323;10324 10315 178 11 IRNVFHCEPANILYICENQPLKK LALRIMEKIRNVFHCE CENQPLKKLVSFSKKN K I R K K L 1 1 3 0 2 1 2 0 1 3 2 2 0 1 2 0 0 0 1 1 0 23 2 2855.4575 Q08AF3 Q08AF3 595 617 SLFN5 Schlafen family member 5 yes yes 4;5 2.0289E-07 68.134 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 19606000 0 0 0 8469000 11136000 0 3512 1049 3552 15578;15579 10325;10326;10327 10327 3 IRSSNFLVTQGYQVK EAPELHGKIRSSNFLV VTQGYQVKLAGFELRK K I R V K L 0 1 1 0 0 2 0 1 0 1 1 1 0 1 0 2 1 0 1 2 0 15 1 1738.9366 Q8NB16;I3L4A6 Q8NB16 332 346 MLKL Mixed lineage kinase domain-like protein yes no 3 2.7928E-08 95.755 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 64668000 11208000 5020500 17419000 0 4433600 26587000 3513 1314 3553 15580;15581;15582;15583;15584 10328;10329;10330;10331 10328 4 ISALENSKNSDLEK QSDLTIEKISALENSK SKNSDLEKKEGRIDDL K I S E K K 1 0 2 1 0 0 2 0 0 1 2 2 0 0 0 3 0 0 0 0 0 14 1 1546.7839 Q86UE8-3;Q86UE8-2;Q86UE8 Q86UE8-3 185 198 TLK2 Serine/threonine-protein kinase tousled-like 2 yes no 3 0.02587 43.03 By MS/MS By matching By matching By matching By matching By matching 1 770370 770370 0 0 0 0 0 3514 1262 3554 15585 10332 10332 1 ISALENSKNSDLEKK QSDLTIEKISALENSK KNSDLEKKEGRIDDLL K I S K K E 1 0 2 1 0 0 2 0 0 1 2 3 0 0 0 3 0 0 0 0 0 15 2 1674.8788 Q86UE8-3;Q86UE8-2;Q86UE8 Q86UE8-3 185 199 TLK2 Serine/threonine-protein kinase tousled-like 2 yes no 3 0.012016 55.724 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 1 4266400 547250 780280 1464800 816950 657120 0 3515 1262 3555 15586;15587;15588;15589;15590 10333;10334 10333 2 ISANENSLAVR ITHQEGEKISANENSL NENSLAVRSTPAEDDS K I S V R S 2 1 2 0 0 0 1 0 0 1 1 0 0 0 0 2 0 0 0 1 0 11 0 1172.6149 F8VQE1;Q9UHB6-2;B4DN52;Q9UHB6;Q9UHB6-4;F8VS07;Q9UHB6-3;F8VRN8 F8VQE1 165 175 LIMA1 LIM domain and actin-binding protein 1 yes no 2 8.629E-30 127.83 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 21956000 1424500 3651400 2942900 1558300 3193700 9185600 3516 107 3556 15591;15592;15593;15594;15595;15596 10335;10336;10337;10338;10339;10340 10336 6 ISASGPESLLGGPGGASAAPAAGSK RTPGGLCRISASGPES AAPAAGSKVLLGFSSD R I S S K V 6 0 0 0 0 0 1 6 0 1 2 1 0 0 3 5 0 0 0 0 0 25 0 2109.0702 Q9Y2U8 Q9Y2U8 110 134 LEMD3 Inner nuclear membrane protein Man1 yes yes 2 1.8698E-51 105.71 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 36185000 0 11656000 0 4169700 4511400 15848000 3517 1638 3557 15597;15598;15599;15600 10341;10342;10343;10344;10345 10342 5 ISAWHNNVEK CVEWFNTKISAWHNNV AWHNNVEKTLPSTKAT K I S E K T 1 0 2 0 0 0 1 0 1 1 0 1 0 0 0 1 0 1 0 1 0 10 0 1196.5938 Q14258 Q14258 558 567 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 0.03698 80.24 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 3518 1105 3558 15601 10346 10346 1 ISCAGPQTYK IHYCDVCKISCAGPQT CAGPQTYKEHLEGQKH K I S Y K E 1 0 0 0 1 1 0 1 0 1 0 1 0 0 1 1 1 0 1 0 0 10 0 1123.5332 Q96KR1;B5MEH6 Q96KR1 338 347 ZFR Zinc finger RNA-binding protein yes no 2 0.0078923 83.862 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 50784000 3392200 4740400 4482800 4001500 22423000 11745000 3519 1403 3559 15602;15603;15604;15605;15606;15607 10347;10348;10349;10350 10348 4 ISCAGPQTYKEHLEGQK IHYCDVCKISCAGPQT KEHLEGQKHKKKEAAL K I S Q K H 1 0 0 0 1 2 2 2 1 1 1 2 0 0 1 1 1 0 1 0 0 17 1 1944.9364 Q96KR1;B5MEH6 Q96KR1 338 354 ZFR Zinc finger RNA-binding protein yes no 3;4 0.0035529 63.682 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 1 1 1 1 21161000 8088000 5222400 1760900 0 3631600 2457700 3520 1403 3560 15608;15609;15610;15611;15612;15613 10351;10352;10353;10354;10355;10356 10352 6 ISCAGPQTYKEHLEGQKHK IHYCDVCKISCAGPQT HLEGQKHKKKEAALKA K I S H K K 1 0 0 0 1 2 2 2 2 1 1 3 0 0 1 1 1 0 1 0 0 19 2 2210.0902 Q96KR1;B5MEH6 Q96KR1 338 356 ZFR Zinc finger RNA-binding protein yes no 4 0.014659 38.777 By matching By MS/MS By matching By matching By matching By matching 1 1 1462200 0 1014700 447550 0 0 0 3521 1403 3561 15614;15615 10357 10357 1 ISDIQSQLEK EFDFSWSKISDIQSQL DIQSQLEKLIEKNYFL K I S E K L 0 0 0 1 0 2 1 0 0 2 1 1 0 0 0 2 0 0 0 0 0 10 0 1159.6085 Q9NVP1;F5H863 Q9NVP1 558 567 DDX18 ATP-dependent RNA helicase DDX18 yes no 2 0.0026367 100.82 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 33924000 0 4578500 3587100 3834000 0 21925000 3522 1550 3562 15616;15617;15618;15619 10358;10359;10360 10359 3 ISDQHTLQTFQGMCK YFYHGVHKISDQHTLQ QTFQGMCKAWDIEELV K I S C K A 0 0 0 1 1 3 0 1 1 1 1 1 1 1 0 1 2 0 0 0 0 15 0 1792.8236 Q9BX63-2;Q9BX63 Q9BX63-2 319 333 BRIP1 Fanconi anemia group J protein yes no 3 0.0076044 47.506 By matching By matching By matching By matching By matching By MS/MS 1 1122900 0 0 0 0 0 1122900 3523 1461 3563 15620 10361 10361 1 ISEGTGFRIHMIHK QIHRELIKISEGTGFR FRIHMIHKAAVAAKKF K I S H K A 0 1 0 0 0 0 1 2 2 3 0 1 1 1 0 1 1 0 0 0 0 14 1 1624.8508 Q9Y2R4;A8MTP9 Q9Y2R4 257 270 DDX52 Probable ATP-dependent RNA helicase DDX52 yes no 3 0.010381 50.897 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 26069000 0 0 3842800 4016800 7571000 10638000 3524 1635 3564 15621;15622;15623;15624 10362;10363 10362 2 ISETSSVESVMGIK TISRRGAKISETSSVE VESVMGIKNFMPALEE K I S I K N 0 0 0 0 0 0 2 1 0 2 0 1 1 0 0 4 1 0 0 2 0 14 0 1465.7334 F8VW34;F8VX54;F8VZH2;F8VWK5;F8VUY0;F8VVS9;A6NE42;Q15583-2;Q15583-3;Q15583 F8VW34 97 110 TGIF1 Homeobox protein TGIF1 yes no 2 0.0011742 84.753 By matching By MS/MS By matching By matching By matching By matching 1 29315000 0 29315000 0 0 0 0 3525 17 3565 15625 10364 10364 1 ISFEEFER LIDYLEGKISFEEFER ISFEEFERRREERKTR K I S E R R 0 1 0 0 0 0 3 0 0 1 0 0 0 2 0 1 0 0 0 0 0 8 0 1055.4924 Q9Y5Q9-2;Q9Y5Q9;F8WC64;H0YFI7 Q9Y5Q9-2 16 23 GTF3C3 General transcription factor 3C polypeptide 3 yes no 2 0.027829 72.879 By matching By matching By matching By matching By matching By MS/MS 1 6059800 0 0 0 0 0 6059800 3526 1656 3566 15626 10365 10365 1 ISFVEEDVHPK PQRLKETRISFVEEDV VEEDVHPKWIPGAADD R I S P K W 0 0 0 1 0 0 2 0 1 1 0 1 0 1 1 1 0 0 0 2 0 11 0 1298.6507 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 1231 1241 AHCTF1 Protein ELYS yes no 3 0.016783 55.721 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 9846700 1038600 1950700 1360500 595850 532710 4368300 3527 1345 3567 15627;15628;15629;15630;15631;15632 10366;10367 10366 2 ISHQNYIAYQK NGGTKRQKISHQNYIA QNYIAYQKQVIRRSMR K I S Q K Q 1 0 1 0 0 2 0 0 1 2 0 1 0 0 0 1 0 0 2 0 0 11 0 1363.6884 Q86UV5;B7ZKS7;Q86UV5-6 Q86UV5 919 929 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes no 3 0.00020848 98.754 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 14301000 1241300 1513900 1756400 1269300 3260000 5260200 3528 1264 3568 15633;15634;15635;15636;15637;15638 10368;10369;10370;10371;10372;10373 10371 6 ISHVVVEDTVVSDK SVLEANSKISHVVVED EDTVVSDKCFPLEDTL K I S D K C 0 0 0 2 0 0 1 0 1 1 0 1 0 0 0 2 1 0 0 5 0 14 0 1525.7988 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 119 132 WAPAL Wings apart-like protein homolog yes no 2;3 1.0952E-70 136.6 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 3 3 2 109770000 19760000 161230 2507100 36491000 19275000 31580000 3529 1253 3569 15639;15640;15641;15642;15643;15644;15645;15646;15647;15648;15649;15650 10374;10375;10376;10377;10378;10379;10380;10381;10382 10379 7 ISIGGGSCAISGGYGSR YGLGGSKRISIGGGSC ISGGYGSRAGGSYGFG R I S S R A 1 1 0 0 1 0 0 6 0 3 0 0 0 0 0 4 0 0 1 0 0 17 0 1597.7519 P02538;CON__P02538;E7EUE8;P04259;CON__P04259;F5H6G5 P02538 70 86 KRT6A;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6B no no 2 0.0019699 64.588 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 2 3945100 974240 491410 0 0 2479400 0 + 3530 287;788 3570 15651;15652;15653;15654 10383;10384 10383 2 ISKSPDGAHLTWEPPSVTSGK PGAPCAIKISKSPDGA PPSVTSGKIIEYSVYL K I S G K I 1 0 0 1 0 0 1 2 1 1 1 2 0 0 3 4 2 1 0 1 0 21 1 2193.1066 A6NEM2;P51610-2;P51610;H7C1C4 A6NEM2 1944 1964 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 3;4 0.00021561 58.107 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 10852000 0 1845700 0 0 0 9006300 3531 18 3571 15655;15656;15657;15658 10385;10386;10387;10388 10386 4 ISLEYSELQDK QLQEKHHRISLEYSEL EYSELQDKVTSAETKV R I S D K V 0 0 0 1 0 1 2 0 0 1 2 1 0 0 0 2 0 0 1 0 0 11 0 1323.6558 O75150-4;H3BP71;O75150;O75150-3;H3BS50;B3KQV1 O75150-4 254 264 RNF40 E3 ubiquitin-protein ligase BRE1B yes no 2 0.033497 50.354 By matching By MS/MS By matching By matching By matching By matching 1 1767900 0 1767900 0 0 0 0 3532 634 3572 15659 10389 10389 1 ISLLRSDITK KDKQLNEKISLLRSDI LLRSDITKLEVDAIVN K I S T K L 0 1 0 1 0 0 0 0 0 2 2 1 0 0 0 2 1 0 0 0 0 10 1 1144.6816 Q9BQ69 Q9BQ69 154 163 MACROD1 O-acetyl-ADP-ribose deacetylase MACROD1 yes yes 2 0.0084015 90.05 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5528800 0 1385900 0 0 753500 3389400 3533 1439 3573 15660;15661;15662 10390 10390 1 ISLQPIATVPNGGTTPK VTVKRESKISLQPIAT PNGGTTPKISKTVLLS K I S P K I 1 0 1 0 0 1 0 2 0 2 1 1 0 0 3 1 3 0 0 1 0 17 0 1692.941 Q9HCI7;G5E9I1 Q9HCI7 380 396 MSL2 E3 ubiquitin-protein ligase MSL2 yes no 2 0.00047777 70.41 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 34990000 0 20665000 0 0 0 14325000 3534 1520 3574 15663;15664 10391;10392 10392 1 ISNPTEFQNHEK QQNHSEIKISNPTEFQ TEFQNHEKQESQDLRA K I S E K Q 0 0 2 0 0 1 2 0 1 1 0 1 0 1 1 1 1 0 0 0 0 12 0 1442.679 Q9BXS6-2;Q9BXS6-3;Q9BXS6;E7ERR5;Q9BXS6-5;E9PB35 Q9BXS6-2 110 121 NUSAP1 Nucleolar and spindle-associated protein 1 yes no 2;3 0.0068973 62.298 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 2 1 2 2 25043000 1409700 5166400 4781800 1252800 3115400 9316600 3535 1463 3575 15665;15666;15667;15668;15669;15670;15671;15672;15673 10393;10394;10395;10396;10397;10398 10396 5 ISNQVDLSNVCAQYR ESLKEYQKISNQVDLS SNVCAQYRQVRFYEGV K I S Y R Q 1 1 2 1 1 2 0 0 0 1 1 0 0 0 0 2 0 0 1 2 0 15 0 1765.8417 E9PF10;O75694-2;B4DLT2;O75694 E9PF10 843 857 NUP155 Nuclear pore complex protein Nup155 yes no 2 0 238.67 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 267310000 57424000 28281000 35769000 7539600 6664600 131640000 3536 100 3576 15674;15675;15676;15677;15678;15679 10399;10400;10401;10402;10403;10404 10401 6 ISNQVDLSNVCAQYRQVR ESLKEYQKISNQVDLS CAQYRQVRFYEGVVEL K I S V R F 1 2 2 1 1 3 0 0 0 1 1 0 0 0 0 2 0 0 1 3 0 18 1 2149.0698 E9PF10;O75694-2;B4DLT2;O75694 E9PF10 843 860 NUP155 Nuclear pore complex protein Nup155 yes no 3 1.4945E-155 149.3 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 2 1 993300000 133530000 173640000 171830000 76545000 28180000 409580000 3537 100 3577 15680;15681;15682;15683;15684;15685;15686 10405;10406;10407;10408;10409;10410;10411 10407 7 ISNTAISISDHTALAQFCKEK AGTACSEKISNTAISI LAQFCKEKKIEFVVVG K I S E K K 3 0 1 1 1 1 1 0 1 3 1 2 0 1 0 3 2 0 0 0 0 21 1 2333.1685 C9JBJ1;C9JTV6;F8WD69;P22102-2;P22102;C9JZG2;C9JKQ7 C9JBJ1 45 65 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 3 0.00075907 54.058 By matching By MS/MS By matching By MS/MS By matching By matching 2 1 58846000 0 40204000 0 18642000 0 0 3538 239 3578 15687;15688;15689 10412;10413 10413 2 ISQAWCETNLRR FSCRKFPRISQAWCET WCETNLRRCISEQHRF R I S R R C 1 2 1 0 1 1 1 0 0 1 1 0 0 0 0 1 1 1 0 0 0 12 1 1532.7518 Q92766-3;Q92766;Q92766-2;C9JU34 Q92766-3 297 308 RREB1 Ras-responsive element-binding protein 1 yes no 3 0.035721 38.875 By matching By matching By matching By matching By matching By MS/MS 1 2360800 0 0 0 0 0 2360800 3539 1357 3579 15690 10414 10414 1 ISQSELFDNK ILEEGETKISQSELFD QSELFDNKSLTTECHL K I S N K S 0 0 1 1 0 1 1 0 0 1 1 1 0 1 0 2 0 0 0 0 0 10 0 1179.5772 A8MTM6;Q15398;Q15398-1 A8MTM6 786 795 DLGAP5 Disks large-associated protein 5 yes no 2 6.2851E-09 114.89 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6738800 612920 0 700630 0 1551700 3873600 3540 42 3580 15691;15692;15693;15694 10415 10415 1 ISSADPSGAFR RKREQFEKISSADPSG ADPSGAFRMLSTAYEQ K I S F R M 2 1 0 1 0 0 0 1 0 1 0 0 0 1 1 3 0 0 0 0 0 11 0 1106.5356 Q13751 Q13751 706 716 LAMB3 Laminin subunit beta-3 yes yes 2 0.016471 58.172 By matching By matching By MS/MS By matching By matching By matching 1 603720 0 0 603720 0 0 0 3541 1091 3581 15695 10416 10416 1 ISSLLEEQFQQGK DERKKNAKISSLLEEQ EEQFQQGKLLACIASR K I S G K L 0 0 0 0 0 3 2 1 0 1 2 1 0 1 0 2 0 0 0 0 0 13 0 1505.7726 Q5JR95;P62241 Q5JR95 138 150 RPS8 40S ribosomal protein S8 yes no 2 0 281.32 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 41217000 0 41217000 0 0 0 0 3542 985 3582 15696;15697 10417;10418;10419 10418 3 ISSMTETAPR VPGPSVPKISSMTETA SMTETAPRALTTEVPI K I S P R A 1 1 0 0 0 0 1 0 0 1 0 0 1 0 1 2 2 0 0 0 0 10 0 1091.5281 A6NEM2 A6NEM2 1501 1510 HCFC1 yes yes 2 0.0086058 81.017 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 8242100 928420 831930 1333300 509230 1846800 2792400 3543 18 3583 15698;15699;15700;15701;15702;15703 10420;10421;10422;10423;10424 10423 5 ISSSLPSGNNNGK ISIKQEPKISSSLPSG PSGNNNGKVLTTEKVK K I S G K V 0 0 3 0 0 0 0 2 0 1 1 1 0 0 1 4 0 0 0 0 0 13 0 1273.6262 Q96CB8;C9JDP3;C9J0M6;E9PGI3 Q96CB8 73 85 INTS12 Integrator complex subunit 12 yes no 2 0.0094432 56.139 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 3646900 397170 631060 793630 164840 695860 964320 3544 1375 3584 15704;15705;15706;15707;15708;15709 10425;10426 10425 2 ISSTPTTETIRGIDSDDVQDNSQLK KSTRRSGRISSTPTTE VQDNSQLKASTQKAAN R I S L K A 0 1 1 4 0 2 1 1 0 3 1 1 0 0 1 4 4 0 0 1 0 25 1 2719.3148 Q96QE3;Q96QE3-2 Q96QE3 600 624 ATAD5 ATPase family AAA domain-containing protein 5 yes no 3 1.6721E-15 78.057 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 12767000 0 5980600 0 0 0 6786900 3545 1415 3585 15710;15711 10427;10428 10427 2 ISSVLAGGSCR GIGGGSSRISSVLAGG VLAGGSCRAPSTYGGG R I S C R A 1 1 0 0 1 0 0 2 0 1 1 0 0 0 0 3 0 0 0 1 0 11 0 1105.555 P02533;CON__P02533;P08779;CON__P08779 P02533 31 41 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 0.013086 61.235 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 7690300 900600 994110 0 3033900 1326800 1434900 + 3546 286;297 3586 15712;15713;15714;15715;15716 10429;10430 10430 2 ISSVLAGGSCRAPSTYGGGLSVSSR GIGGGSSRISSVLAGG GGLSVSSRFSSGGACG R I S S R F 2 2 0 0 1 0 0 5 0 1 2 0 0 0 1 7 1 0 1 2 0 25 1 2425.202 P08779;CON__P08779 P08779 31 55 KRT16 Keratin, type I cytoskeletal 16 yes no 3 6.3068E-97 123.17 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 64922000 0 12598000 0 52324000 0 0 + 3547 297 3587 15717;15718 10431;10432 10432 2 ISSVLAGGSCRAPSTYGGGLSVSSSR GIGGGSSRISSVLAGG GLSVSSSRFSSGGACG R I S S R F 2 2 0 0 1 0 0 5 0 1 2 0 0 0 1 8 1 0 1 2 0 26 1 2512.234 P02533;CON__P02533 P02533 31 56 KRT14 Keratin, type I cytoskeletal 14 yes no 3 3.5664E-116 125.08 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 37241000 0 9550000 0 27691000 0 0 + 3548 286 3588 15719;15720 10433;10434 10433 2 ISTISSVR SRHESVSKISTISSVR ISTISSVRNLTIRSSS K I S V R N 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 3 1 0 0 1 0 8 0 861.49198 P15924;P15924-2 P15924 2593 2600 DSP Desmoplakin yes no 2 0.008839 93.143 By matching By MS/MS By matching By matching By matching By matching 1 1 2618100 0 630400 0 0 0 1987700 3549 840 3589 15721;15722 10435 10435 1 ISTPQTNTVPIKPLISTPPVSSQPK PRSYVSPRISTPQTNT PPVSSQPKVSTPVVKQ R I S P K V 0 0 1 0 0 2 0 0 0 3 1 2 0 0 6 4 4 0 0 2 0 25 1 2629.4691 Q9BTA9-2;Q9BTA9;Q9BTA9-5;Q9NZE0 Q9BTA9-2 410 434 WAC WW domain-containing adapter protein with coiled-coil yes no 3 1.574E-38 96.777 By matching By MS/MS By matching By matching By matching By matching 1 40218000 0 40218000 0 0 0 0 3550 1446 3590 15723 10436 10436 1 ISTSDILSEK KEQNLTRRISTSDILS TSDILSEKKLGEDEEE R I S E K K 0 0 0 1 0 0 1 0 0 2 1 1 0 0 0 3 1 0 0 0 0 10 0 1091.571 O60293-2;O60293 O60293-2 351 360 ZFC3H1 Zinc finger C3H1 domain-containing protein yes no 2 0.03377 55.806 By matching By MS/MS By matching By matching By matching By matching 1 1 2181600 0 634490 0 0 0 1547100 3551 729 3591 15724;15725 10437 10437 1 ISTTTSEEPCRDK PEACDAAKISTTTSEE SEEPCRDKGSPAVKAH K I S D K G 0 1 0 1 1 0 2 0 0 1 0 1 0 0 1 2 3 0 0 0 0 13 1 1522.6933 O15119-3;C9JIZ8;O15119-2;O15119 O15119-3 395 407 TBX3 T-box transcription factor TBX3 yes no 3 0.0022756 69.03 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2548800 0 637300 809130 0 0 1102400 3552 251 3592 15726;15727;15728 10438 10438 1 ISTVVSSKEVNK RATDGKKKISTVVSSK VSSKEVNKFQMAYSNL K I S N K F 0 0 1 0 0 0 1 0 0 1 0 2 0 0 0 3 1 0 0 3 0 12 1 1289.7191 P37108;H0YLA2 P37108 67 78 SRP14 Signal recognition particle 14 kDa protein yes no 2;3 4.2859E-193 177.16 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 144970000 23570000 17330000 27157000 9544300 26411000 40957000 3553 903 3593 15729;15730;15731;15732;15733;15734;15735;15736;15737;15738;15739;15740;15741 10439;10440;10441;10442;10443;10444;10445;10446;10447;10448;10449 10444 11 ISVATGALEAAQGSK AGTPAVIRISVATGAL LEAAQGSKSQCQTRQT R I S S K S 4 0 0 0 0 1 1 2 0 1 1 1 0 0 0 2 1 0 0 1 0 15 0 1401.7464 A6NEM2;P51610-2;P51610 A6NEM2 1149 1163 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2 1.0992E-09 96.489 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 26840000 7005500 3528300 7770200 939340 0 7596500 3554 18 3594 15742;15743;15744;15745;15746 10450;10451;10452;10453 10451 2 ISVVSATKGVPAGNSDTEGGQPGRK LPKSFKRKISVVSATK EGGQPGRKRRWGASTA K I S R K R 2 1 1 1 0 1 1 5 0 1 0 2 0 0 2 3 2 0 0 3 0 25 2 2411.2405 E7EQT4;Q9UKV3;Q9UKV3-3;Q9UKV3-2;G3V3T3 E7EQT4 784 808 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3;4 0.00083985 53.278 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 5760700 941190 463360 0 1058900 1309300 1988000 3555 364 3595 15747;15748;15749;15750;15751 10454;10455 10455 1 ISVYYNEATGGK DSDLQLDRISVYYNEA YNEATGGKYVPRAILV R I S G K Y 1 0 1 0 0 0 1 2 0 1 0 1 0 0 0 1 1 0 2 1 0 12 0 1300.6299 F8VUJ7;Q5JP53;F8VYX6;F8VW92;P07437;E9PBJ4 F8VUJ7 47 58 TUBB Tubulin beta chain yes no 2 0.022435 50.897 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 9427200 562070 2536400 871300 0 0 5457400 3556 542 3596 15752;15753;15754;15755 10456 10456 1 ISYQSSSTEER QHGRKANKISYQSSST QSSSTEERRLHYGENG K I S E R R 0 1 0 0 0 1 2 0 0 1 0 0 0 0 0 4 1 0 1 0 0 11 0 1285.5786 P04279;P04279-2;Q02383 P04279 286 296 SEMG1;SEMG2 Semenogelin-1;Alpha-inhibin-92;Alpha-inhibin-31;Seminal basic protein;Semenogelin-2 yes no 2 0.002397 87.641 By matching By matching By matching By matching By MS/MS By matching 1 1 1906000 0 0 0 0 1633000 272990 3557 790 3597 15756;15757 10457 10457 1 ISYQSSSTEERR QHGRKANKISYQSSST SSSTEERRLHYGENGV K I S R R L 0 2 0 0 0 1 2 0 0 1 0 0 0 0 0 4 1 0 1 0 0 12 1 1441.6797 P04279;P04279-2;Q02383 P04279 286 297 SEMG1;SEMG2 Semenogelin-1;Alpha-inhibin-92;Alpha-inhibin-31;Seminal basic protein;Semenogelin-2 yes no 3 0.020064 44.847 By matching By matching By matching By matching By MS/MS By matching 1 1 1386500 0 0 0 0 1093900 292610 3558 790 3598 15758;15759 10458 10458 1 ITAFLSSSKPYTEAASSK SLVLNFRKITAFLSSS YTEAASSKQLENQNPQ K I T S K Q 3 0 0 0 0 0 1 0 0 1 1 2 0 1 1 5 2 0 1 0 0 18 1 1886.9626 Q14146 Q14146 1026 1043 URB2 Unhealthy ribosome biogenesis protein 2 homolog yes yes 3 0.0014567 66.977 By matching By matching By matching By matching By matching By MS/MS 1 2686800 0 0 0 0 0 2686800 3559 1095 3599 15760 10459 10459 1 ITAQENDMEVELPAAANSR MSTVSELRITAQENDM LPAAANSRKQFSVPLR R I T S R K 4 1 2 1 0 1 3 0 0 1 1 0 1 0 1 1 1 0 0 1 0 19 0 2057.9688 B7Z6Q6;Q99661;Q99661-2;Q5JR91;B7Z7M6;Q5JR89 B7Z6Q6 122 140 KIF2C Kinesin-like protein KIF2C yes no 2 4.942E-295 175.77 By matching By MS/MS By matching By matching By matching By matching 1 4432200 0 4432200 0 0 0 0 3560 193 3600 15761 10460 10460 1 ITAQENDMEVELPAAANSRK MSTVSELRITAQENDM PAAANSRKQFSVPLRR R I T R K Q 4 1 2 1 0 1 3 0 0 1 1 1 1 0 1 1 1 0 0 1 0 20 1 2186.0637 B7Z6Q6;Q99661;Q99661-2;Q5JR91;B7Z7M6;Q5JR89 B7Z6Q6 122 141 KIF2C Kinesin-like protein KIF2C yes no 3 0 184.32 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 57377000 14580000 0 15041000 0 7140200 20616000 3561 193 3601 15762;15763;15764;15765 10461;10462;10463;10464 10464 4 ITAQQITTPGAQQK GPAAVQQKITAQQITT TTPGAQQKVAYAAQPA K I T Q K V 2 0 0 0 0 4 0 1 0 2 0 1 0 0 1 0 3 0 0 0 0 14 0 1483.7995 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91 Q96L91-4 2878 2891 EP400 E1A-binding protein p400 yes no 2 0.0008968 85.909 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 2 13821000 2155400 1548500 3165900 1776800 2164900 3009100 3562 1405 3602 15766;15767;15768;15769;15770;15771;15772 10465;10466;10467;10468;10469 10468 4 ITDGLHALQEASNK AKEKEVKKITDGLHAL ALQEASNKDAEALAAA K I T N K D 2 0 1 1 0 1 1 1 1 1 2 1 0 0 0 1 1 0 0 0 0 14 0 1495.7631 O95347-2;O95347 O95347-2 355 368 SMC2 Structural maintenance of chromosomes protein 2 yes no 3 0.0011944 69.352 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 4086800 0 1442000 0 0 646070 1998700 3563 770 3603 15773;15774;15775 10470;10471;10472;10473 10473 4 ITESEEVVSR ENAGLRLRITESEEVV ESEEVVSREVSGIKAA R I T S R E 0 1 0 0 0 0 3 0 0 1 0 0 0 0 0 2 1 0 0 2 0 10 0 1147.5721 P02545;P02545-3;Q6UYC3;P02545-2;Q3BDU5;Q5TCJ4 P02545 63 72 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.0028576 95.483 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 9014700 0 2938000 1397500 1122500 1134600 2422100 3564 783 3604 15776;15777;15778;15779;15780 10474;10475;10476;10477 10477 4 ITESEEVVSREVSGIK ENAGLRLRITESEEVV SREVSGIKAAYEAELG R I T I K A 0 1 0 0 0 0 4 1 0 2 0 1 0 0 0 3 1 0 0 3 0 16 1 1760.9156 P02545;P02545-3;Q6UYC3;P02545-2;Q3BDU5;Q5TCJ4 P02545 63 78 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.0033886 66.059 By matching By MS/MS By matching By matching By matching By matching 1 3155800 0 3155800 0 0 0 0 3565 783 3605 15781 10478 10478 1 ITESPRASMGVLSGK SSTTPTRKITESPRAS SMGVLSGKRKLITSEE K I T G K R 1 1 0 0 0 0 1 2 0 1 1 1 1 0 1 3 1 0 0 1 0 15 1 1531.8028 Q12888;Q12888-2;A6NNK5;F8VY86;H7BZY0 Q12888 1653 1667 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.0079555 49.298 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 21687000 5290900 3973700 5127000 0 2879500 4416100 3566 1063 3606 15782;15783;15784;15785;15786 10479;10480 10480 2 ITESSLVEITEHK ESVVNEEKITESSLVE LVEITEHKDFTLKTEE K I T H K D 0 0 0 0 0 0 3 0 1 2 1 1 0 0 0 2 2 0 0 1 0 13 0 1484.7722 Q99590-2;F8VXG7;Q99590;F8W028 Q99590-2 269 281 SCAF11 Protein SCAF11 yes no 2;3 0 213.84 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 134520000 39760000 18823000 20308000 6775300 7024600 41824000 3567 547 3607 15787;15788;15789;15790;15791;15792;15793;15794;15795;15796;15797;15798 10481;10482;10483;10484;10485;10486;10487;10488;10489;10490;10491 10490 10 ITEVLVR YDSDMPRKITEVLVRK KITEVLVRKVPDNQQF K I T V R K 0 1 0 0 0 0 1 0 0 1 1 0 0 0 0 0 1 0 0 2 0 7 0 828.5069 H0Y7A5;Q9BX10-2;Q9BX10-4;Q9BX10 H0Y7A5 122 128 GTPBP2 GTP-binding protein 2 yes no 2 0.0078948 94.006 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 5437800 656650 0 0 504000 1843800 2433300 3568 613 3608 15799;15800;15801;15802 10492;10493 10492 2 ITEVSCKSPQPDPVKTPTSSK EESMTDDKITEVSCKS VKTPTSSKQRLKISLG K I T S K Q 0 0 0 1 1 1 1 0 0 1 0 3 0 0 4 4 3 0 0 2 0 21 2 2285.1573 P46013;F5H4V4;P46013-2 P46013 1976 1996 MKI67 Antigen KI-67 no no 3;4 1.0254E-06 82.765 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 1 2 2 101400000 11118000 23747000 19456000 2566800 20768000 23741000 3569 919;920 3609 15803;15804;15805;15806;15807;15808;15809;15810;15811;15812;15813 10494;10495;10496;10497;10498;10499;10500;10501 10499 7 ITEVSCKSPQPESFK EESMTDDKITEVSCKS SPQPESFKTSRSSKQR K I T F K T 0 0 0 0 1 1 2 0 0 1 0 2 0 1 2 3 1 0 0 1 0 15 1 1735.8451 P46013;F5H4V4;P46013-2 P46013 2459 2473 MKI67 Antigen KI-67 no no 2;3 9.9918E-70 131.56 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 289940000 31749000 62045000 41316000 23001000 44228000 87599000 3570 919;920 3610 15814;15815;15816;15817;15818;15819;15820;15821;15822;15823;15824;15825 10502;10503;10504;10505;10506;10507;10508;10509;10510;10511;10512 10509 11 ITEVSCKSPQPESFKTSR EESMTDDKITEVSCKS PESFKTSRSSKQRLKI K I T S R S 0 1 0 0 1 1 2 0 0 1 0 2 0 1 2 4 2 0 0 1 0 18 2 2080.0259 P46013;F5H4V4;P46013-2 P46013 2459 2476 MKI67 Antigen KI-67 no no 3;4 7.8476E-32 109.55 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 2 2 2 1 1 30731000 8355300 10065000 3711100 4760800 1591900 2246200 3571 919;920 3611 15826;15827;15828;15829;15830;15831;15832;15833;15834 10513;10514;10515;10516;10517 10515 5 ITHCPTLLTR HYRKEVVKITHCPTLL HCPTLLTRDGDRIRSN K I T T R D 0 1 0 0 1 0 0 0 1 1 2 0 0 0 1 0 3 0 0 0 0 10 0 1210.6492 A6NHR9;A6NHR9-2 A6NHR9 1853 1862 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes no 3 0.027662 56.043 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 13771000 0 1139000 1574900 704220 4481800 5871100 3572 23 3612 15835;15836;15837;15838;15839 10518 10518 1 ITHKGEIEIESDAPMK VERRPITKITHKGEIE IESDAPMKEQEAAMEI K I T M K E 1 0 0 1 0 0 3 1 1 3 0 2 1 0 1 1 1 0 0 0 0 16 1 1796.8978 Q92576-2;Q92576;E7EVH3;E7ER40 Q92576-2 965 980 PHF3 PHD finger protein 3 yes no 3;4 3.9453E-18 103.6 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 1 2 19796000 2950700 4086900 2964400 1446500 1812400 6534800 3573 1353 3613 15840;15841;15842;15843;15844;15845;15846;15847;15848;15849 10519;10520;10521;10522;10523;10524;10525;10526;10527;10528 10526 10 ITIADCGQLE RNGKTSKKITIADCGQ IADCGQLE________ K I T L E - 1 0 0 1 1 1 1 1 0 2 1 0 0 0 0 0 1 0 0 0 0 10 0 1118.5278 P62937;B4DM82;Q567Q0 P62937 156 165 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 1;2 1.2843E-34 108.57 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 2 2 1 148920000 95410000 14939000 0 8158200 0 30417000 3574 999 3614 15850;15851;15852;15853;15854;15855 10529;10530;10531;10532;10533;10534 10529 6 ITIPDIK LVENPSARITIPDIKK RITIPDIKKDRWYNKP R I T I K K 0 0 0 1 0 0 0 0 0 3 0 1 0 0 1 0 1 0 0 0 0 7 0 798.48511 O14757-2;F5H7S4;O14757;E7EPP6;E9PPA5 O14757-2 160 166 CHEK1 Serine/threonine-protein kinase Chk1 yes no 2 1.4404E-57 152.63 By matching By matching By matching By matching By matching By MS/MS 1 6705000 0 0 0 0 0 6705000 3575 358 3615 15856 10535 10535 1 ITITNDKGRLSK KSTGKENKITITNDKG NDKGRLSKEDIERMVQ K I T S K E 0 1 1 1 0 0 0 1 0 2 1 2 0 0 0 1 2 0 0 0 0 12 2 1344.7725 P11142;E9PKE3;E9PNE6;A8K7Q2;P54652;E9PS65;F8W1P1;B4DXY3;F8WEE3;Q53FA3;P34931;B3KUS2;E9PM13;B4DHP5;P17066;P08107;H0YG33;F8VZJ4;F5H1D3;F5GZ62;Q5SP16;E7EP94 P11142 501 512 HSPA8;HSPA2;HSPA1L;HSPA6;HSPA1A Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 6;Heat shock 70 kDa protein 1A/1B no no 3 3.7694E-07 105.46 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 9499700 413750 4633700 841300 0 0 3610900 3576 824;619;846 3616 15857;15858;15859;15860 10536;10537 10537 2 ITKMPCQSLQPEPINTPTHTK APKSEKGKITKMPCQS INTPTHTKQQLKASLG K I T T K Q 0 0 1 0 1 2 1 0 1 2 1 2 1 0 4 1 4 0 0 0 0 21 1 2420.2192 P46013;F5H4V4;P46013-2 P46013 1002 1022 MKI67 Antigen KI-67 no no 3;4 7.0785E-46 111.45 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 2 3 4 430160000 58815000 87175000 65803000 27317000 23761000 167290000 3577 919;920 3617;3618 15861;15862;15863;15864;15865;15866;15867;15868;15869;15870;15871;15872;15873;15874;15875;15876;15877 10538;10539;10540;10541;10542;10543;10544;10545;10546;10547 10538 105 10 ITKMPCQSLQPEPINTPTHTKQQLK APKSEKGKITKMPCQS THTKQQLKASLGKVGV K I T L K A 0 0 1 0 1 4 1 0 1 2 2 3 1 0 4 1 4 0 0 0 0 25 2 2917.5154 P46013;F5H4V4;P46013-2 P46013 1002 1026 MKI67 Antigen KI-67 no no 4;5 7.8054E-05 55.302 By MS/MS By matching By MS/MS By matching By matching By matching 1 2 2 15686000 3449400 0 8013900 4223100 0 0 3578 919;920 3619 15878;15879;15880;15881;15882 10548;10549 10549 1 ITKPNVYHESK PSHLLRSKITKPNVYH PNVYHESKLAAKEYQA K I T S K L 0 0 1 0 0 0 1 0 1 1 0 2 0 0 1 1 1 0 1 1 0 11 1 1314.6932 P78563-2;P78563-3;P78563-4;G5E9B4;P78563 P78563-2 652 662 ADARB1 Double-stranded RNA-specific editase 1 yes no 3 0.021966 54.784 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 2611100 650900 414150 851260 0 466320 228430 3579 593 3620 15883;15884;15885;15886;15887 10550 10550 1 ITLDNAYMEK LKKGATLKITLDNAYM LDNAYMEKCDENILWL K I T E K C 1 0 1 1 0 0 1 0 0 1 1 1 1 0 0 0 1 0 1 0 0 10 0 1196.5747 P14618;H3BQ34;E9PF79;H3BTN5;P14618-2;H3BT25;H3BUW1;H3BTJ2;P14618-3 P14618 142 151 PKM Pyruvate kinase PKM;Pyruvate kinase yes no 2 0.014544 68.355 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 13341000 0 0 4515000 2078200 898370 5849100 3580 837 3621 15888;15889;15890;15891 10551;10552 10551 2 ITLQDKQNMVK DKLVATSKITLQDKQN QDKQNMVKRVSIMSYA K I T V K R 0 0 1 1 0 2 0 0 0 1 1 2 1 0 0 0 1 0 0 1 0 11 1 1316.7122 B3KXH8;Q9Y5X1 B3KXH8 329 339 SNX9 Sorting nexin-9 yes no 3 0.0041252 79.07 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4522400 0 0 0 342870 903950 3275500 3581 78 3622 15892;15893;15894 10553 10553 1 ITLQDVVSHSK IGLLVKNKITLQDVVS QDVVSHSKKLTKKNKE K I T S K K 0 0 0 1 0 1 0 0 1 1 1 1 0 0 0 2 1 0 0 2 0 11 0 1225.6667 P46940;H0YLE8 P46940 925 935 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 2;3 3.5486E-05 101.39 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 2 17077000 3235200 2332900 0 1241200 1259300 9008600 3582 929 3623 15895;15896;15897;15898;15899;15900;15901;15902 10554;10555;10556;10557;10558;10559 10559 6 ITLQDVVSHSKK IGLLVKNKITLQDVVS DVVSHSKKLTKKNKEQ K I T K K L 0 0 0 1 0 1 0 0 1 1 1 2 0 0 0 2 1 0 0 2 0 12 1 1353.7616 P46940;H0YLE8 P46940 925 936 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 3 0.00093717 80.871 By matching By matching By matching By matching By matching By MS/MS 1 1891500 0 0 0 0 0 1891500 3583 929 3624 15903 10560 10560 1 ITLSSSSEEYQK LPDPGFQKITLSSSSE SSSEEYQKVWNLFNRT K I T Q K V 0 0 0 0 0 1 2 0 0 1 1 1 0 0 0 4 1 0 1 0 0 12 0 1370.6565 Q9H0J9 Q9H0J9 501 512 PARP12 Poly [ADP-ribose] polymerase 12 yes yes 2 0.013365 56.205 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2136700 0 720010 0 319550 0 1097100 3584 1480 3625 15904;15905;15906 10561;10562 10561 2 ITLTSRNVK EVAIHRIRITLTSRNV TLTSRNVKSLEKVCAD R I T V K S 0 1 1 0 0 0 0 0 0 1 1 1 0 0 0 1 2 0 0 1 0 9 1 1030.6135 P60866;P60866-2;E5RJX2;E5RIP1 P60866 22 30 RPS20 40S ribosomal protein S20 yes no 2 0.038068 77.533 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 4115000 1577600 1095700 972100 0 0 469580 3585 979 3626 15907;15908;15909;15910 10563 10563 1 ITPEFSK NGGPPSTRITPEFSKW RITPEFSKWASDEMPS R I T S K W 0 0 0 0 0 0 1 0 0 1 0 1 0 1 1 1 1 0 0 0 0 7 0 820.43307 Q5TDE7;Q5TDE8;B4DLZ9;Q5VTB9;F8WB55 Q5TDE7 161 167 RNF220 E3 ubiquitin-protein ligase RNF220 yes no 2 0.040654 80.229 By matching By matching By matching By matching By matching By MS/MS 1 1291900 0 0 0 0 0 1291900 3586 101 3627 15911 10564 10564 1 ITQDLMAK IVSSVQSKITQDLMAK ITQDLMAKVRAMLAAS K I T A K V 1 0 0 1 0 1 0 0 0 1 1 1 1 0 0 0 1 0 0 0 0 8 0 918.48445 Q12872;F5H6B8 Q12872 928 935 SFSWAP Splicing factor, suppressor of white-apricot homolog yes no 2 3.0597E-09 122.19 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 12980000 1059500 1843000 0 1612900 4002700 4461500 3587 522 3628 15912;15913;15914;15915;15916 10565 10565 1 ITQQGTDPLVLAVQSK KKKKHELKITQQGTDP LVLAVQSKEQAEQWLK K I T S K E 1 0 0 1 0 3 0 1 0 1 2 1 0 0 1 1 2 0 0 2 0 16 0 1696.9359 Q8N556;E9PDT7 Q8N556 219 234 AFAP1 Actin filament-associated protein 1 yes no 2 4.0419E-65 130.64 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 84340000 0 38689000 27596000 9797900 8026100 230650 3588 423 3629 15917;15918;15919;15920;15921 10566;10567;10568;10569 10569 4 ITRLTYEIEDEK QIKELNEKITRLTYEI TYEIEDEKRRRKSVED K I T E K R 0 1 0 1 0 0 3 0 0 2 1 1 0 0 0 0 2 0 1 0 0 12 1 1508.7722 P15924;P15924-2;H7BYR0 P15924 1111 1122 DSP Desmoplakin yes no 3 4.1518E-08 106.54 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 14858000 1427900 2626000 3457700 2894800 0 4451300 3589 840 3630 15922;15923;15924;15925;15926 10570;10571;10572;10573 10573 4 ITRNQCQLCR DSCCVIDKITRNQCQL RNQCQLCRFKKCIAVG K I T C R F 0 2 1 0 2 2 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 10 1 1347.65 P10827-2;P10827-4;P10827-3;P10827 P10827-2 102 111 THRA Thyroid hormone receptor alpha yes no 3 0.0089324 79.148 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 2096100 192500 533500 892010 0 0 478100 3590 821 3631 15927;15928;15929;15930 10574 10574 1 ITRYTEDCFSDSNCVPNKSK KRKMDVSKITRYTEDC NCVPNKSKMQEVDFLE K I T S K M 0 1 2 2 2 0 1 0 0 1 0 2 0 1 1 3 2 0 1 1 0 20 2 2420.0737 Q9H582-2;Q9H582 Q9H582-2 300 319 ZNF644 Zinc finger protein 644 yes no 3;4 0.0001675 77.959 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 1 1 1 1 2 28031000 8082800 3194800 3868600 3186300 4660300 5038600 3591 1492 3632 15931;15932;15933;15934;15935;15936;15937;15938 10575;10576;10577;10578;10579 10576 5 ITSEAIGQLHR DHVHAVWKITSEAIGQ EAIGQLHRSLESCPGE K I T H R S 1 1 0 0 0 1 1 1 1 2 1 0 0 0 0 1 1 0 0 0 0 11 0 1223.6622 Q9UNY4;Q9UNY4-2 Q9UNY4 538 548 TTF2 Transcription termination factor 2 yes no 2 0.029071 51.727 By matching By matching By matching By matching By matching By MS/MS 1 1 1305500 0 0 0 0 432580 872960 3592 1618 3633 15939;15940 10580 10580 1 ITTSHPRVPSLTTVPQTQGQTTAQK RGLGATTKITTSHPRV QGQTTAQKVSKKTGPR K I T Q K V 1 1 0 0 0 4 0 1 1 1 1 1 0 0 3 2 7 0 0 2 0 25 1 2676.4195 Q9BW19 Q9BW19 62 86 KIFC1 Kinesin-like protein KIFC1 yes yes 3;4 1.4693E-12 70.358 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 3 3 50314000 0 10513000 14357000 5710500 6212300 13522000 3593 1456 3634 15941;15942;15943;15944;15945;15946;15947;15948;15949;15950;15951 10581;10582;10583;10584;10585;10586;10587;10588;10589 10586 7 ITVAECIETQSK WFCPECEKITVAECIE ECIETQSKAMTMLTIE K I T S K A 1 0 0 0 1 1 2 0 0 2 0 1 0 0 0 1 2 0 0 1 0 12 0 1377.681 Q9ULU4-14;Q2HXV3;Q9ULU4-12;Q9ULU4-13;B7ZM62;H7C4X9;Q9ULU4-8;Q2HXV1;Q9ULU4-9;F8WAN7;Q9ULU4-5;Q9ULU4-10;Q9ULU4-7;E7ETU8;F5H0X3;Q9ULU4;Q9ULU4-11;Q5TH12 Q9ULU4-14 128 139 ZMYND8 Protein kinase C-binding protein 1 yes no 2 0.0018624 84.365 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 2 1 5121300 1221700 969010 0 0 1260500 1670100 3594 1160 3635 15952;15953;15954;15955;15956 10590;10591;10592;10593;10594 10592 5 ITVDDKHYQK EVATEEVKITVDDKHY VDDKHYQKALNEINQF K I T Q K A 0 0 0 2 0 1 0 0 1 1 0 2 0 0 0 0 1 0 1 1 0 10 1 1245.6354 CON__P02663 CON__P02663 71 80 yes yes 2;3 0.0027307 99.815 By matching By matching By MS/MS By matching By matching By MS/MS 1 2 1 5749900 827040 0 4380000 0 0 542910 + 3595 289 3636 15957;15958;15959;15960 10595;10596;10597 10595 3 ITVEDDVGGVQGK SDYLDLDKITVEDDVG DVGGVQGKRKAASKAA K I T G K R 0 0 0 2 0 1 1 3 0 1 0 1 0 0 0 0 1 0 0 3 0 13 0 1315.662 Q96B01-2;Q96B01;Q96B01-3;B4DUS5;F5H1Y0;H0YGT5 Q96B01-2 140 152 RAD51AP1 RAD51-associated protein 1 yes no 2 3.1834E-47 130.15 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 17045000 2479900 4343400 2429600 1167200 2190100 4434300 3596 1369 3637 15961;15962;15963;15964;15965;15966 10598;10599;10600;10601;10602;10603;10604 10600 7 ITVVPSAK MAHYNFKKITVVPSAK ITVVPSAKDFIDLTLS K I T A K D 1 0 0 0 0 0 0 0 0 1 0 1 0 0 1 1 1 0 0 2 0 8 0 813.496 Q9BZE4 Q9BZE4 9 16 GTPBP4 Nucleolar GTP-binding protein 1 yes yes 2 0.035201 69.628 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 10138000 1324300 1684000 1432800 1215200 2209700 2271900 3597 1471 3638 15967;15968;15969;15970;15971;15972 10605 10605 1 IVADFSASVKKPHTLLQR PETNNILKIVADFSAS KPHTLLQRVKACTTEE K I V Q R V 2 1 0 1 0 1 0 0 1 1 2 2 0 1 1 2 1 0 0 2 0 18 2 2009.1422 F8W720;B4DUT7;P49915 F8W720 369 386 GMPS GMP synthase [glutamine-hydrolyzing] yes no 4;5 2.4772E-07 93.106 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 2 1 16379000 4014700 0 11103000 0 1261200 0 3598 129 3639 15973;15974;15975;15976 10606;10607;10608;10609 10607 4 IVAERPGTNSTGPAPMAPPRAPGPLSK KSAEAFGKIVAERPGT RAPGPLSKQGSGSSQP K I V S K Q 4 2 1 0 0 0 1 3 0 1 1 1 1 0 7 2 2 0 0 1 0 27 2 2668.4119 Q13263-2;Q13263 Q13263-2 326 352 TRIM28 Transcription intermediary factor 1-beta yes no 4 0.00075372 46.145 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 21958000 6183600 1668100 6330500 0 5114500 2661100 3599 1076 3640 15977;15978;15979;15980;15981 10610;10611;10612 10612 3 IVETEAYLGPEDEAAHSR NGTELRGRIVETEAYL EDEAAHSRGGRQTPRN R I V S R G 3 1 0 1 0 0 4 1 1 1 1 0 0 0 1 1 1 0 1 1 0 18 0 1985.933 G5E9E2;Q5J9I4;P29372-2;P29372;A2IDA3 G5E9E2 104 121 MPG DNA-3-methyladenine glycosylase yes no 2;3 0.00028615 79.326 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 54214000 4958000 10195000 3604800 2035300 7795700 25625000 3600 594 3641 15982;15983;15984;15985;15986;15987;15988;15989;15990;15991 10613;10614;10615;10616;10617;10618;10619;10620 10619 7 IVETEAYLGPEDEAAHSRGGR NGTELRGRIVETEAYL AAHSRGGRQTPRNRGM R I V G R Q 3 2 0 1 0 0 4 3 1 1 1 0 0 0 1 1 1 0 1 1 0 21 1 2256.0771 G5E9E2;Q5J9I4;P29372-2;P29372;A2IDA3 G5E9E2 104 124 MPG DNA-3-methyladenine glycosylase yes no 3;4 8.6146E-06 67.994 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 1 1 3 38044000 0 6232000 2750500 1597000 3061100 24404000 3601 594 3642 15992;15993;15994;15995;15996;15997;15998;15999;16000 10621;10622;10623 10621 3 IVGPQVVIFCMHHQR HLKKLGCRIVGPQVVI IFCMHHQRCVPRAEHP R I V Q R C 0 1 0 0 1 2 0 1 2 2 0 0 1 1 1 0 0 0 0 3 0 15 0 1819.9338 Q92547 Q92547 78 92 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 4 5.9241E-14 105.65 By matching By matching By matching By matching By matching By MS/MS 1 5071900 0 0 0 0 0 5071900 3602 1351 3643 16001 10624 10624 1 IVKEAHEPLAVADAK QLKKVLKKIVKEAHEP PLAVADAKLGGVIKEK K I V A K L 4 0 0 1 0 0 2 0 1 1 1 2 0 0 1 0 0 0 0 2 0 15 1 1589.8777 Q9Y2X3 Q9Y2X3 79 93 NOP58 Nucleolar protein 58 yes yes 3 0.0012058 69.431 By matching By matching By matching By MS/MS By matching By matching 1 1 1 2156200 420000 0 959930 776240 0 0 3603 1640 3644 16002;16003;16004 10625 10625 1 IVKEAYPDHTQFEK PGIAGLMKIVKEAYPD PDHTQFEKNNPHYDPS K I V E K N 1 0 0 1 0 1 2 0 1 1 0 2 0 1 1 0 1 0 1 1 0 14 1 1703.8519 Q9P016;Q9P016-2 Q9P016 129 142 THYN1 Thymocyte nuclear protein 1 yes no 3;4 0.00043609 87.863 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 3 2 2 1 2 2 44402000 4799200 7136400 9297600 2025600 7309200 13834000 3604 1570 3645 16005;16006;16007;16008;16009;16010;16011;16012;16013;16014;16015;16016 10626;10627;10628;10629;10630;10631;10632;10633 10633 8 IVLNSIEQYQAHVSGFKHKNQSPK GYPCKTCKIVLNSIEQ KHKNQSPKTVASSLGQ K I V P K T 1 0 2 0 0 3 1 1 2 2 1 3 0 1 1 3 0 0 1 2 0 24 2 2751.4456 B7Z367;Q9UL40;D6RJ07;Q9UL40-2;B7Z4J8;B7Z4N4 B7Z367 214 237 ZNF346 Zinc finger protein 346 yes no 4;5;6 1.6723E-08 64.522 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 2 1 1 16370000 2453100 0 7886200 1180000 0 4850300 3605 184 3646 16017;16018;16019;16020;16021 10634;10635;10636;10637 10635 4 IVLTNPVCTEVGEK AVKADLGKIVLTNPVC VCTEVGEKIALSRRVE K I V E K I 0 0 1 0 1 0 2 1 0 1 1 1 0 0 1 0 2 0 0 3 0 14 0 1557.8072 Q2VIR3;P41091 Q2VIR3 427 440 EIF2S3L;EIF2S3 Putative eukaryotic translation initiation factor 2 subunit 3-like protein;Eukaryotic translation initiation factor 2 subunit 3 yes no 2 8.0836E-08 98 By matching By MS/MS By matching By matching By matching By matching 1 3599400 0 3599400 0 0 0 0 3606 910 3647 16022 10638 10638 1 IVPVVSQSECK VSEASLIRIVPVVSQS VVSQSECKEEALQMSS R I V C K E 0 0 0 0 1 1 1 0 0 1 0 1 0 0 1 2 0 0 0 3 0 11 0 1244.6435 Q76L83-2;E7EWD6;Q76L83 Q76L83-2 162 172 ASXL2 Putative Polycomb group protein ASXL2 yes no 2 0.0044484 76.843 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3925800 239660 1153900 0 0 689920 1842300 3607 391 3648 16023;16024;16025;16026 10639 10639 1 IVRASNGDAWVEAHGK DIKNVPFKIVRASNGD AWVEAHGKLYSPSQIG K I V G K L 3 1 1 1 0 0 1 2 1 1 0 1 0 0 0 1 0 1 0 2 0 16 1 1708.8645 B7Z4V2;P38646;D6RJI2 B7Z4V2 130 145 HSPA9 Stress-70 protein, mitochondrial yes no 4 0.0035973 64.476 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4656700 0 1425200 1308200 0 0 1923300 3608 187 3649 16027;16028;16029 10640 10640 1 IVTADRAATGN MRVHPYQRIVTADRAA ADRAATGN________ R I V G N - 3 1 1 1 0 0 0 1 0 1 0 0 0 0 0 0 2 0 0 1 0 11 1 1087.5622 Q96PU8-3;Q96PU8;H0YG47 Q96PU8-3 323 333 QKI Protein quaking yes no 2 0.011151 77.597 By matching By matching By MS/MS By matching By matching By matching 1 1 1017300 0 0 898210 0 119110 0 3609 1412 3650 16030;16031 10641 10641 1 IVVEAPAKEMEK TPPRKRKKIVVEAPAK APAKEMEKVEEMPHKP K I V E K V 2 0 0 0 0 0 3 0 0 1 0 2 1 0 1 0 0 0 0 2 0 12 1 1342.7166 Q9Y5N6;H3BT22 Q9Y5N6 203 214 ORC6 Origin recognition complex subunit 6 yes no 3 0.028202 48.568 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 5811300 953130 151880 0 2022400 1432300 1251700 3610 1655 3651 16032;16033;16034;16035;16036 10642 10642 1 IVVGHAIHNDFK ILKILTGKIVVGHAIH HAIHNDFKALQYFHPK K I V F K A 1 0 1 1 0 0 0 1 2 2 0 1 0 1 0 0 0 0 0 2 0 12 0 1348.7252 Q9H9L3 Q9H9L3 258 269 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 yes yes 2;3 2.7229E-50 132.32 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 3 3 58584000 1939800 4481100 2920300 2613700 12790000 33839000 3611 1509 3652 16037;16038;16039;16040;16041;16042;16043;16044;16045;16046 10643;10644;10645;10646;10647;10648;10649;10650;10651;10652;10653 10646 11 IVVQKYHTINGHNCEVK DDHDTVDKIVVQKYHT NGHNCEVKKALSKQEM K I V V K K 0 0 2 0 1 1 1 1 2 2 0 2 0 0 0 0 1 0 1 3 0 17 1 2038.0418 E7EWI9;E7ERJ4;P51991-2;P51991 E7EWI9 161 177 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 4 0.0017081 59.673 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 4705700 0 966560 2227500 1511600 0 0 3612 371;955 3653 16047;16048;16049 10654;10655 10655 2 IWGAYDGKFEK SSADKLIKIWGAYDGK AYDGKFEKTISGHKLG K I W E K T 1 0 0 1 0 0 1 2 0 1 0 2 0 1 0 0 0 1 1 0 0 11 1 1312.6452 P61964 P61964 71 81 WDR5 WD repeat-containing protein 5 yes yes 3 0.0094662 65.842 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 14226000 0 1404100 3402700 1969100 578030 6871700 3613 983 3654 16050;16051;16052;16053;16054 10656;10657;10658 10656 3 IWHHTFYNELR TNWDDMEKIWHHTFYN HTFYNELRVAPEEHPV K I W L R V 0 1 1 0 0 0 1 0 2 1 1 0 0 1 0 0 1 1 1 0 0 11 0 1514.7419 F5H0N0;B4E335;P63261;P60709;I3L3I4;G5E9R0;I3L3R2;E7EVS6;I3L3I0;I3L1U9;E7EQV5;Q5T8M8;A6NL76;B4DW52;P68133;P68032;C9JUM1;C9JZR7;I3L4N8;F5GYT4;Q6S8J3;P0CG38;A5A3E0;P0CG39;Q9BYX7 F5H0N0 85 95 ACTG1;ACTB;ACTA1;ACTC1;POTEE;POTEI;POTEF;POTEJ;POTEKP Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;POTE ankyrin domain family member E;POTE ankyrin domain family member I;POTE ankyrin domain family member F;POTE ankyrin domain family member J;Putative beta-actin-like protein 3 yes no 3 2.1772E-42 135.8 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 27981000 0 0 4363400 2406100 6075800 15136000 3614 164 3655 16055;16056;16057;16058 10659;10660;10661 10660 3 IYCKPHFNQLFK TYASLHGRIYCKPHFN PHFNQLFKSKGNYDEG R I Y F K S 0 0 1 0 1 1 0 0 1 1 1 2 0 2 1 0 0 0 1 0 0 12 1 1593.8126 F8VQE1;Q9UHB6-2;B4DN52;Q9UHB6;Q9UHB6-4;F8VS07;Q9UHB6-3 F8VQE1 275 286 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.011541 57.885 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4391300 0 508110 0 483300 0 3399900 3615 107 3656 16059;16060;16061 10662;10663 10662 2 IYEAQPEISR NNIKLLNKIYEAQPEI EAQPEISRAFQTREFI K I Y S R A 1 1 0 0 0 1 2 0 0 2 0 0 0 0 1 1 0 0 1 0 0 10 0 1204.6088 O60287 O60287 400 409 URB1 Nucleolar pre-ribosomal-associated protein 1 yes yes 2 0.0060443 86.014 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 7864700 0 1501600 726610 605810 1516100 3514500 3616 728 3657 16062;16063;16064;16065;16066 10664;10665;10666 10666 3 IYEISNRWK AKFDPSTKIYEISNRW YEISNRWKLAQVQVQK K I Y W K L 0 1 1 0 0 0 1 0 0 2 0 1 0 0 0 1 0 1 1 0 0 9 1 1207.635 Q01780 Q01780 717 725 EXOSC10 Exosome component 10 yes yes 2;3 0.0067612 91.069 By matching By matching By MS/MS By MS/MS By matching By matching 1 2 2 2 2 1 18345000 1096500 3645100 4625500 2473600 660440 5843700 3617 1030 3658 16067;16068;16069;16070;16071;16072;16073;16074;16075;16076 10667;10668;10669 10668 3 IYEYVESR ELNASKHRIYEYVESR IYEYVESRMSFIAPNL R I Y S R M 0 1 0 0 0 0 2 0 0 1 0 0 0 0 0 1 0 0 2 1 0 8 0 1057.508 Q8WWY3;E7EVX8;Q8WWY3-2;E7ESA8;E7EU94;E7ESX0;Q8WWY3-3;E7EN72 Q8WWY3 204 211 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes no 2 0.003009 99.139 By matching By matching By matching By matching By matching By MS/MS 1 1596100 0 0 0 0 0 1596100 3618 1342 3659 16077 10670 10670 0 IYHGNCNTPIPED FRCEGHVKIYHGNCNT CNTPIPED________ K I Y E D - 0 0 2 1 1 0 1 1 1 2 0 0 0 0 2 0 1 0 1 0 0 13 0 1528.6616 Q8NBI6-3;B4DVL3;Q8NBI6-2;Q8NBI6 Q8NBI6-3 175 187 XXYLT1 Xyloside xylosyltransferase 1 yes no 2 0.0022326 66.393 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 6524700 760400 853200 773860 1056700 1956800 1123800 3619 134 3660 16078;16079;16080;16081;16082;16083 10671;10672;10673 10672 3 IYIKHPHLFK GMGGTRGRIYIKHPHL IKHPHLFKAYLLIEED R I Y F K A 0 0 0 0 0 0 0 0 2 2 1 2 0 1 1 0 0 0 1 0 0 10 1 1294.755 H7C1J2;H7C1M5;Q9H147 H7C1J2 159 168 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 yes no 3 0.0029187 95.358 By matching By matching By matching By matching By matching By MS/MS 1 1 2809900 0 0 0 0 270650 2539200 3620 667 3661 16084;16085 10674 10674 1 IYLCGFSGRK EDLLDGCRIYLCGFSG LCGFSGRKLDKLRRLI R I Y R K L 0 1 0 0 1 0 0 2 0 1 1 1 0 1 0 1 0 0 1 0 0 10 1 1199.6121 Q92547 Q92547 364 373 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 3 0.025347 51.436 By matching By MS/MS By matching By matching By matching By matching 1 1 1604000 0 509060 0 0 0 1095000 3621 1351 3662 16086;16087 10675 10675 1 IYLLECK DVILYEKRIYLLECKT RIYLLECKTGNGQTYR R I Y C K T 0 0 0 0 1 0 1 0 0 1 2 1 0 0 0 0 0 0 1 0 0 7 0 937.49429 CON__P06868 CON__P06868 105 111 yes yes 2 0.0074562 101.69 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 2 1 46997000 28914000 0 0 4966200 9547100 3569500 + 3622 295 3663 16088;16089;16090;16091;16092 10676;10677;10678 10677 3 IYLLECKTGNGQTYRGTTAETK DVILYEKRIYLLECKT RGTTAETKSGVTCQKW R I Y T K S 1 1 1 0 1 1 2 3 0 1 2 2 0 0 0 0 5 0 2 0 0 22 2 2503.2377 CON__P06868 CON__P06868 105 126 yes yes 4 0.00021601 57.616 By MS/MS By matching By matching By matching By matching By matching 1 1 1 13671000 10156000 0 1245900 2269900 0 0 + 3623 295 3664 16093;16094;16095 10679 10679 1 IYPVGYFTK GMTYSKGKIYPVGYFT YPVGYFTKENPVKGSP K I Y T K E 0 0 0 0 0 0 0 1 0 1 0 1 0 1 1 0 1 0 2 1 0 9 0 1086.575 Q2L6G8;Q15517;G8JLG2 Q2L6G8 318 326 CDSN Corneodesmosin yes no 2 0.0065883 91.265 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 57304000 0 44136000 0 13168000 0 0 3624 601 3665 16096;16097 10680;10681 10680 2 IYQYDLR AIGSSRGKIYQYDLRM KIYQYDLRMLKSPVKT K I Y L R M 0 1 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 2 0 0 7 0 969.49198 Q8NHV4-2;Q8NHV4;G3V3F1 Q8NHV4-2 183 189 NEDD1 Protein NEDD1 yes no 2 0.011502 91.906 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 7432100 0 1186600 2013900 0 851100 3380600 3625 585 3666 16098;16099;16100;16101 10682;10683 10683 2 IYQYVINKER DNNLTTGKIYQYVINK QYVINKERKGDYLGKT K I Y E R K 0 1 1 0 0 1 1 0 0 2 0 1 0 0 0 0 0 0 2 1 0 10 1 1324.7139 P17812;B7Z9C4 P17812 93 102 CTPS1 CTP synthase 1 yes no 3 0.0090691 77.533 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 24620000 0 0 3135100 1724000 6977500 12783000 3626 852 3667 16102;16103;16104;16105 10684;10685;10686;10687 10687 4 IYSFTDNAPSPSIGGSSR SIKAEADKIYSFTDNA PSIGGSSRLENTTPTQ K I Y S R L 1 1 1 1 0 0 0 2 0 2 0 0 0 1 2 5 1 0 1 0 0 18 0 1854.8748 O15014 O15014 795 812 ZNF609 Zinc finger protein 609 yes yes 2 0.0015609 60.093 By matching By MS/MS By matching By matching By matching By matching 1 5075700 0 5075700 0 0 0 0 3627 701 3668 16106 10688;10689 10689 2 KAAAAAWEEPSSGNGTAR ________________ SSGNGTARAGPRKRGG K K A A R A 6 1 1 0 0 0 2 2 0 0 0 1 0 0 1 2 1 1 0 0 0 18 1 1772.8442 Q9P258 Q9P258 5 22 RCC2 Protein RCC2 yes yes 2;3 1.0091E-32 110.34 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 3 3 2 729210000 121940000 127730000 97105000 48652000 82139000 251640000 3628 1575 3669 16107;16108;16109;16110;16111;16112;16113;16114;16115;16116;16117;16118;16119;16120;16121;16122;16123 10690;10691;10692;10693;10694;10695;10696;10697;10698;10699;10700;10701 10690 11 KAAAAAWEEPSSGNGTARAGPR ________________ GTARAGPRKRGGPAGR K K A P R K 7 2 1 0 0 0 2 3 0 0 0 1 0 0 2 2 1 1 0 0 0 22 2 2154.0566 Q9P258 Q9P258 5 26 RCC2 Protein RCC2 yes yes 4 0.028669 32.797 By MS/MS By matching By MS/MS By matching By matching By matching 2 1 1 1 1 1 17716000 4885200 2950500 3701100 2761400 1668300 1749800 3629 1575 3670 16124;16125;16126;16127;16128;16129;16130 10702;10703 10703 2 KAAAPAPEEEMDECEQALAAEPK QAERKEEKKAAAPAPE QALAAEPKAKDPFAHL K K A P K A 7 0 0 1 1 1 6 0 0 0 1 2 1 0 3 0 0 0 0 0 0 23 1 2484.1149 P26641;B4DTG2 P26641 253 275 EEF1G Elongation factor 1-gamma yes no 3 2.027E-21 93.404 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 10677000 3774900 6902100 0 0 0 0 3630 127 3671 16131;16132 10704;10705;10706 10705 3 KAACEFSETDVTNTEHHQPSNNDLNTTEK EISLDSAKKAACEFSE NDLNTTEKRAAERHPE K K A E K R 2 0 4 2 1 1 4 0 2 0 1 2 0 1 1 2 5 0 0 1 0 29 1 3316.4538 E9PFZ0;P38398-4;P38398-2;P38398;E9PFC7;F8W8H7;E7EMP0;E9PH68;E7EWN5;Q3B891;B7ZA85;E7EUM2;P38398-6;E7ETR2;P38398-3 E9PFZ0 176 204 BRCA1 Breast cancer type 1 susceptibility protein yes no 4 6.6217E-05 44.11 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 21952000 6935000 4119000 0 3279700 2388400 5230200 3631 426 3672 16133;16134;16135;16136;16137 10707;10708;10709;10710;10711 10707 4 KAACIAEQYHTVLK LVKLDLRKKAACIAEQ EQYHTVLKLQGQVSAK K K A L K L 3 0 0 0 1 1 1 0 1 1 1 2 0 0 0 0 1 0 1 1 0 14 1 1630.8501 O95235;B4DL79 O95235 806 819 KIF20A Kinesin-like protein KIF20A yes no 3 8.4762E-11 95.981 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 16238000 0 2728700 3568400 3138200 3081800 3720500 3632 767 3673 16138;16139;16140;16141;16142;16143 10712;10713;10714;10715;10716;10717 10717 6 KAADSLQQNLQR RPNMALGKKAADSLQQ SLQQNLQRDYDRAMSW K K A Q R D 2 1 1 1 0 3 0 0 0 0 2 1 0 0 0 1 0 0 0 0 0 12 1 1370.7266 Q1ED39;H3BNU8 Q1ED39 407 418 KNOP1 Lysine-rich nucleolar protein 1 yes no 3 1.0238E-50 134.13 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 30205000 6213100 2000700 3097100 2286700 8137100 8470400 3633 1157 3674 16144;16145;16146;16147;16148;16149;16150 10718;10719;10720;10721;10722;10723 10722 6 KAANLNSIIHRLEK RDNPLRKKKAANLNSI SIIHRLEKAASREEPI K K A E K A 2 1 2 0 0 0 1 0 1 2 2 2 0 0 0 1 0 0 0 0 0 14 2 1605.9315 P39880-2;P39880;P39880-3;P39880-4;P39880-5;P39880-6 P39880-2 1458 1471 CUX1 Homeobox protein cut-like 1 yes no 4 0.032997 39.961 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 7767700 0 0 2993800 281340 615060 3877500 3634 906 3675 16151;16152;16153;16154 10724;10725 10725 2 KAANMLQQSGSKNTGAK KNSGNFQKKAANMLQQ GSKNTGAKKRKIDDA_ K K A A K K 3 0 2 0 0 2 0 2 0 0 1 3 1 0 0 2 1 0 0 0 0 17 2 1732.889 P46063 P46063 626 642 RECQL ATP-dependent DNA helicase Q1 yes yes 3 0.0063168 60.541 By matching By matching By MS/MS By matching By matching By matching 1 1 3183700 0 0 2390800 792920 0 0 3635 922 3676 16155;16156 10726 10726 1 KAAQEQVLNASR LVEMVKAKKAAQEQVL EQVLNASRAKK_____ K K A S R A 3 1 1 0 0 2 1 0 0 0 1 1 0 0 0 1 0 0 0 1 0 12 1 1313.7052 Q99543;Q99543-2 Q99543 607 618 DNAJC2 DnaJ homolog subfamily C member 2 yes no 2;3 6.9552E-05 97.779 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 1 1 2 13704000 1738300 1944200 2893700 1192500 3184300 2751300 3636 1426 3677 16157;16158;16159;16160;16161;16162;16163;16164;16165;16166 10727;10728;10729;10730;10731;10732;10733;10734 10731 7 KAASLGSSQSSRTYAGGTASATK EKKGSDEKKAASLGSS GGTASATKVSASSGAT K K A T K V 5 1 0 0 0 1 0 3 0 0 1 2 0 0 0 6 3 0 1 0 0 23 2 2186.0927 G5E9D3;P20810-5;E7ESM9;P20810-7;P20810-6;B7Z468;F8W7E0;H0YA91;E9PSG1;D6RGF7;D6RBR1;E7EN75;H0Y944 G5E9D3 48 70 CAST Calpastatin yes no 4 7.3642E-07 60.761 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 12680000 2865800 1923100 3512800 456890 2490400 1431000 3637 375 3678 16167;16168;16169;16170;16171;16172 10735;10736;10737;10738 10738 4 KAAVAVVPLVSEDK VLQEPPAKKAAVAVVP VPLVSEDKSVTVPEAE K K A D K S 3 0 0 1 0 0 1 0 0 0 1 2 0 0 1 1 0 0 0 4 0 14 1 1424.8239 B4DLG2;O75152 B4DLG2 645 658 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2;3 4.0784E-05 90.689 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 1 1 44852000 19879000 4446100 8684500 3058400 3697100 5086600 3638 97 3679 16173;16174;16175;16176;16177;16178;16179 10739;10740;10741;10742;10743 10742 5 KAAVSWLTPAPSK GSGQPLDKKAAVSWLT WLTPAPSKKADSVAAK K K A S K K 3 0 0 0 0 0 0 0 0 0 1 2 0 0 2 2 1 1 0 1 0 13 1 1354.7609 Q9H9L3 Q9H9L3 95 107 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 yes yes 2;3 0.0010039 94.45 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 2 1 3 44570000 0 1194800 10445000 8128800 1219600 23582000 3639 1509 3680 16180;16181;16182;16183;16184;16185;16186;16187;16188 10744;10745;10746;10747;10748;10749 10747 6 KAAVSWLTPAPSKK GSGQPLDKKAAVSWLT LTPAPSKKADSVAAKV K K A K K A 3 0 0 0 0 0 0 0 0 0 1 3 0 0 2 2 1 1 0 1 0 14 2 1482.8558 Q9H9L3 Q9H9L3 95 108 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 yes yes 3 2.1984E-12 104.41 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 23213000 4436000 3795400 2391900 2751400 5474800 4363600 3640 1509 3681 16189;16190;16191;16192;16193;16194 10750;10751;10752;10753;10754;10755 10754 6 KACDELELHQR VKRSMGWKKACDELEL DELELHQRFLREGRFW K K A Q R F 1 1 0 1 1 1 2 0 1 0 2 1 0 0 0 0 0 0 0 0 0 11 1 1397.6721 B7Z3Z1;F5H449;Q5BJG6;B7Z293;B0QZE2;Q5VUI0;Q15326;F6UH50;Q2LD45;E7ENI9 B7Z3Z1 140 150 ZMYND11 Zinc finger MYND domain-containing protein 11 yes no 3 0.0013686 86.463 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 2610300 0 213740 579100 256250 741120 820060 3641 58 3682 16195;16196;16197;16198;16199 10756;10757 10756 2 KADCPENATMSLK SHIPPLNRKADCPENA ENATMSLKHLTKKLLN R K A L K H 2 0 1 1 1 0 1 0 0 0 1 2 1 0 1 1 1 0 0 0 0 13 1 1463.6748 Q9H9L3 Q9H9L3 292 304 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 yes yes 3 0.0010345 82.925 By matching By matching By matching By matching By MS/MS By matching 1 1 2280100 0 0 0 0 1125500 1154700 3642 1509 3683 16200;16201 10758 10758 1 KADCPENATMSLKHLTK SHIPPLNRKADCPENA MSLKHLTKKLLNRDIQ R K A T K K 2 0 1 1 1 0 1 0 1 0 2 3 1 0 1 1 2 0 0 0 0 17 2 1942.9605 Q9H9L3 Q9H9L3 292 308 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 yes yes 4 0.003421 49.621 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 2391800 791850 609320 278470 712130 0 0 3643 1509 3684 16202;16203;16204;16205 10759 10759 1 KADPENIKSEGDGTQDIVDK AETEQNKKKADPENIK GTQDIVDKSSEKLVRG K K A D K S 1 0 1 4 0 1 2 2 0 2 0 3 0 0 1 1 1 0 0 1 0 20 2 2158.039 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1505 1524 RIF1 Telomere-associated protein RIF1 yes no 3 0.0045477 52.318 By matching By matching By matching By matching By MS/MS By matching 1 1 1 2114100 0 0 755240 747370 611450 0 3644 1201 3685 16206;16207;16208 10760 10760 1 KADTEEEFLAFRK PQPKRSLRKADTEEEF EEFLAFRKQTPSAGKA R K A R K Q 2 1 0 1 0 0 3 0 0 0 1 2 0 2 0 0 1 0 0 0 0 13 2 1582.7991 P46013;F5H4V4;P46013-2 P46013 1761 1773 MKI67 Antigen KI-67 no no 3 0.0058181 82.069 By matching By matching By matching By matching By matching By MS/MS 1 1 2244300 0 594830 0 0 0 1649500 3645 919;920 3686 16209;16210 10761 10761 1 KADVEEEFLAFRK QRPKRSLKKADVEEEF EEFLAFRKLTPSAGKA K K A R K L 2 1 0 1 0 0 3 0 0 0 1 2 0 2 0 0 0 0 0 1 0 13 2 1580.8199 P46013;F5H4V4;P46013-2 P46013 1883 1895 MKI67 Antigen KI-67 no no 3 3.2663E-46 128.35 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 154370000 27049000 0 59316000 35431000 32573000 0 3646 919;920 3687 16211;16212;16213;16214 10762;10763;10764 10764 2 KADVEEESLALRK PQSKRSLRKADVEEES EESLALRKRTPSVGKA R K A R K R 2 1 0 1 0 0 3 0 0 0 2 2 0 0 0 1 0 0 0 1 0 13 2 1486.7991 P46013;F5H4V4;P46013-2 P46013 2245 2257 MKI67 Antigen KI-67 no no 3 0.0063991 83.243 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 3846700 1072700 0 1104700 0 0 1669200 3647 919;920 3688 16215;16216;16217 10765;10766 10765 2 KAEAVVNTVDISEREK KRLEQTRKKAEAVVNT VDISEREKVAQLRSLY K K A E K V 2 1 1 1 0 0 3 0 0 1 0 2 0 0 0 1 1 0 0 3 0 16 2 1786.9425 Q8IY81 Q8IY81 763 778 FTSJ3 pre-rRNA processing protein FTSJ3 yes yes 3 4.9701E-26 107.13 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 7801000 1467400 980880 1014100 1683700 1594300 1060500 3648 1289 3689 16218;16219;16220;16221;16222;16223 10767;10768;10769;10770 10767 4 KAEGEPQEESPLKSK GSQEKQTKKAEGEPQE EESPLKSKSQEEPKDT K K A S K S 1 0 0 0 0 1 4 1 0 0 1 3 0 0 2 2 0 0 0 0 0 15 2 1655.8366 Q9NYF8-2;Q9NYF8;Q9NYF8-4;E9PK09;E9PQN2;E9PKI6;E9PJA7;Q9NYF8-3;E9PK91 Q9NYF8-2 166 180 BCLAF1 Bcl-2-associated transcription factor 1 no no 3 2.9002E-70 135.61 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 14967000 1956900 1553300 3101800 3060500 2726000 2568900 3649 1563;452 3690 16224;16225;16226;16227;16228;16229 10771;10772;10773;10774;10775 10774 5 KAEGTVFTEEDFQK PVAKTKKKKAEGTVFT FTEEDFQKFQQEYFGS K K A Q K F 1 0 0 1 0 1 3 1 0 0 0 2 0 2 0 0 2 0 0 1 0 14 1 1627.773 Q86WX3 Q86WX3 115 128 RPS19BP1 Active regulator of SIRT1 yes yes 3 0.0003355 86.944 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 9896200 1425500 1704600 1609300 1132300 866800 3157700 3650 1269 3691 16230;16231;16232;16233;16234;16235 10776;10777;10778;10779;10780;10781;10782 10781 5 KAEPSEVDMNSPK PKAKQVKKKAEPSEVD EVDMNSPKSKKAKKKE K K A P K S 1 0 1 1 0 0 2 0 0 0 0 2 1 0 2 2 0 0 0 1 0 13 1 1430.6711 Q9NR30;Q3SWU7 Q9NR30 61 73 DDX21 Nucleolar RNA helicase 2 yes no 3 1.1275E-09 104.81 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 19786000 4087000 2367200 1191900 966780 7703200 3469500 3651 1534 3692 16236;16237;16238;16239;16240;16241;16242 10783;10784;10785;10786;10787;10788;10789;10790;10791 10790 8 KAEPSEVDMNSPKSK PKAKQVKKKAEPSEVD DMNSPKSKKAKKKEEP K K A S K K 1 0 1 1 0 0 2 0 0 0 0 3 1 0 2 3 0 0 0 1 0 15 2 1645.7981 Q9NR30;Q3SWU7 Q9NR30 61 75 DDX21 Nucleolar RNA helicase 2 yes no 3;4 3.0096E-229 177.39 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 49188000 10766000 6310200 4245800 5498100 16199000 6168900 3652 1534 3693 16243;16244;16245;16246;16247;16248;16249 10792;10793;10794;10795;10796;10797;10798 10793 7 KAGPGSLELCGLPSQK QRRRLQKKKAGPGSLE LCGLPSQKTASLKKRK K K A Q K T 1 0 0 0 1 1 1 3 0 0 3 2 0 0 2 2 0 0 0 0 0 16 1 1640.8556 Q14684-2;Q14684 Q14684-2 556 571 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 2;3 8.1871E-251 178.47 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 4 2 329390000 98388000 18066000 58059000 19696000 91395000 43785000 3653 1111 3694 16250;16251;16252;16253;16254;16255;16256;16257;16258;16259;16260;16261;16262;16263 10799;10800;10801;10802;10803;10804;10805;10806;10807;10808 10805 10 KAHLMEIQVNGGTVAEK RLLPLRQKKAHLMEIQ NGGTVAEKLDWARERL K K A E K L 2 0 1 0 0 1 2 2 1 1 1 2 1 0 0 0 1 0 0 2 0 17 1 1823.9564 P39023;G5E9G0;B5MCW2;H7C422;H7C3M2 P39023 177 193 RPL3 60S ribosomal protein L3 yes no 3;4 0.00030986 70.784 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 2 1 3 18969000 2503400 445880 4740000 1606100 0 9673500 3654 905 3695 16264;16265;16266;16267;16268;16269;16270;16271 10809;10810;10811;10812;10813 10809 4 KAIACLLFGGSRK IFGGTDMKKAIACLLF LLFGGSRKRLPDGLTR K K A R K R 2 1 0 0 1 0 0 2 0 1 2 2 0 1 0 1 0 0 0 0 0 13 2 1419.802 P33992;B1AHB1;E7EQY5 P33992 351 363 MCM5 DNA replication licensing factor MCM5 yes no 3 8.2027E-15 108.32 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 61695000 6856600 0 26287000 3164200 10772000 14616000 3655 892 3696 16272;16273;16274;16275;16276 10814;10815;10816 10815 3 KAIEDEGGNPDEIEITSEGNK SVLMERLKKAIEDEGG EITSEGNKKTSKRSSK K K A N K K 1 0 2 2 0 0 5 3 0 3 0 2 0 0 1 1 1 0 0 0 0 21 1 2244.0394 Q15424;F5H1L1;F5H0H3;B7Z959 Q15424 63 83 SAFB Scaffold attachment factor B1 yes no 3 2.5197E-06 66.636 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 11565000 2129900 2505500 1091400 1203600 2218500 2416100 3656 1137 3697 16277;16278;16279;16280;16281;16282 10817;10818;10819;10820;10821;10822 10821 6 KAIEDEGGNPDEIEITSEGNKK SVLMERLKKAIEDEGG ITSEGNKKTSKRSSKG K K A K K T 1 0 2 2 0 0 5 3 0 3 0 3 0 0 1 1 1 0 0 0 0 22 2 2372.1343 Q15424;F5H1L1;F5H0H3;B7Z959 Q15424 63 84 SAFB Scaffold attachment factor B1 yes no 3 2.3887E-05 62.099 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 13201000 3400300 1452500 2073400 1656700 2430300 2187700 3657 1137 3698 16283;16284;16285;16286;16287;16288 10823;10824;10825;10826 10825 4 KAIEELLKEAK EEDQELERKAIEELLK EELLKEAKRGKTRAET R K A A K R 2 0 0 0 0 0 3 0 0 1 2 3 0 0 0 0 0 0 0 0 0 11 2 1270.7497 Q9Y2S0-2 Q9Y2S0-2 10 20 POLR1D DNA-directed RNA polymerases I and III subunit RPAC2 yes yes 2;3 9.5527E-08 111.5 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 2 1 2 34407000 1405100 9024600 10160000 2261500 0 11556000 3658 1637 3699 16289;16290;16291;16292;16293;16294;16295;16296 10827;10828;10829;10830;10831 10830 4 KAIPSSVRITR NAVKAEPKKAIPSSVR PSSVRITRSKAKDQME K K A T R S 1 2 0 0 0 0 0 0 0 2 0 1 0 0 1 2 1 0 0 1 0 11 2 1226.7459 A8MTM6;Q15398;Q15398-1;G3V4E5 A8MTM6 144 154 DLGAP5 Disks large-associated protein 5 yes no 3 0.015819 73.887 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 24575000 0 4071800 5121600 3429900 5143900 6808200 3659 42 3700 16297;16298;16299;16300;16301 10832;10833;10834 10833 3 KAISSTEAVLNNRFIK FATYEEAKKAISSTEA VLNNRFIKVYWHREGS K K A I K V 2 1 2 0 0 0 1 0 0 2 1 2 0 1 0 2 1 0 0 1 0 16 2 1790.005 Q5T8P6-5;Q5T8P6-4;Q5T8P6-3;Q5T8P6-2;Q5T8P6 Q5T8P6-5 139 154 RBM26 RNA-binding protein 26 yes no 3 0.0065188 68.168 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 19269000 7243700 1042300 6478800 1057200 2125300 1321500 3660 1196 3701 16302;16303;16304;16305;16306;16307 10835;10836;10837 10836 2 KALAAAGYDVEK GVSLAALKKALAAAGY AAGYDVEKNNSRIKLG K K A E K N 4 0 0 1 0 0 1 1 0 0 1 2 0 0 0 0 0 0 1 1 0 12 1 1234.6558 P16403;Q02539;P22492;P10412;P16402 P10412 64 75 HIST1H1C;HIST1H1A;HIST1H1T;HIST1H1E;HIST1H1D Histone H1.2;Histone H1.1;Histone H1t;Histone H1.4;Histone H1.3 no no 2;3 1.6061E-96 148.89 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 1 2 2 2 2 76203000 19206000 4488800 3676700 4634200 27945000 16252000 3661 818;843 3702 16308;16309;16310;16311;16312;16313;16314;16315;16316;16317;16318;16319;16320 10838;10839;10840;10841;10842;10843;10844;10845;10846;10847;10848;10849 10842 12 KALAAAGYDVEKNNSR GVSLAALKKALAAAGY DVEKNNSRIKLGLKSL K K A S R I 4 1 2 1 0 0 1 1 0 0 1 2 0 0 0 1 0 0 1 1 0 16 2 1705.8747 P16403;Q02539;P22492;P10412;P16402 P10412 64 79 HIST1H1C;HIST1H1A;HIST1H1T;HIST1H1E;HIST1H1D Histone H1.2;Histone H1.1;Histone H1t;Histone H1.4;Histone H1.3 no no 2;3;4 5.5896E-118 147.75 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 3 2 140330000 47106000 8421000 9060500 6713700 47396000 21633000 3662 818;843 3703 16321;16322;16323;16324;16325;16326;16327;16328;16329;16330;16331;16332;16333;16334;16335 10850;10851;10852;10853;10854;10855;10856;10857;10858 10856 8 KALAAGGYDVEK GLSLAALKKALAAGGY AGGYDVEKNNSRIKLG K K A E K N 3 0 0 1 0 0 1 2 0 0 1 2 0 0 0 0 0 0 1 1 0 12 1 1220.6401 P16401 P16401 67 78 HIST1H1B Histone H1.5 yes yes 3 3.2404E-12 108.72 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 10503000 2114400 1170800 0 727100 2850200 3641000 3663 842 3704 16336;16337;16338;16339;16340 10859;10860;10861;10862 10859 4 KALAAGGYDVEKNNSR GLSLAALKKALAAGGY DVEKNNSRIKLGLKSL K K A S R I 3 1 2 1 0 0 1 2 0 0 1 2 0 0 0 1 0 0 1 1 0 16 2 1691.8591 P16401 P16401 67 82 HIST1H1B Histone H1.5 yes yes 3 3.707E-26 108.63 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 34186000 8759400 3004200 3986800 4432100 8530800 5472800 3664 842 3705 16341;16342;16343;16344;16345;16346;16347 10863;10864;10865;10866;10867;10868;10869 10865 7 KALDQFVNFSEQKEK KKYSHVNKKALDQFVN NFSEQKEKLIKRQEEL K K A E K L 1 0 1 1 0 2 2 0 0 0 1 3 0 2 0 1 0 0 0 1 0 15 2 1809.9261 Q9UQE7 Q9UQE7 985 999 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.0062697 67.326 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2729800 0 596910 0 712350 0 1420600 3665 1625 3706 16348;16349;16350 10870;10871 10870 2 KALEQLNGFELAGRPMK FSDSECAKKALEQLNG ELAGRPMKVGHVTERT K K A M K V 2 1 1 0 0 1 2 2 0 0 3 2 1 1 1 0 0 0 0 0 0 17 2 1901.0193 H0Y4X3;E1P5S2;G3XAC6;Q14498-3;Q14498-2;Q14498 H0Y4X3 157 173 RBM39 RNA-binding protein 39 yes no 3;4 7.0172E-209 161.48 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 4 1 2 3 1 371440000 4711100 102940000 102350000 139340000 6223300 15872000 3666 334 3707;3708 16351;16352;16353;16354;16355;16356;16357;16358;16359;16360;16361;16362 10872;10873;10874;10875;10876;10877;10878;10879;10880 10872 30 9 KALGGDVSDQSLESHSQK PGSKAEAKKALGGDVS SLESHSQKVSETQMCE K K A Q K V 1 0 0 2 0 2 1 2 1 0 2 2 0 0 0 4 0 0 0 1 0 18 1 1884.9177 Q9UKJ3;Q9UKJ3-2 Q9UKJ3 484 501 GPATCH8 G patch domain-containing protein 8 yes no 3;4 5.2365E-33 111.65 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 2 2 1 1 2 24492000 5377500 4376100 3944300 2584700 4146600 4062400 3667 1601 3709 16363;16364;16365;16366;16367;16368;16369;16370;16371;16372 10881;10882;10883;10884;10885;10886 10884 6 KANGPNYIQPQK VTPCQHAKKANGPNYI PNYIQPQKRQTTFESQ K K A Q K R 1 0 2 0 0 2 0 1 0 1 0 2 0 0 2 0 0 0 1 0 0 12 1 1356.715 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;Q76FK4-3 F5H101 635 646 NOL8 Nucleolar protein 8 yes no 2;3 0.0019946 67.385 By matching By matching By MS/MS By matching By MS/MS By matching 2 2 2 1 2 1 18987000 958890 3317400 6112400 1547500 2767800 4282900 3668 27 3710 16373;16374;16375;16376;16377;16378;16379;16380;16381;16382 10887;10888;10889 10887 3 KANIRNMSVIAHVDHGK QIRAIMDKKANIRNMS IAHVDHGKSTLTDSLV K K A G K S 2 1 2 1 0 0 0 1 2 2 0 2 1 0 0 1 0 0 0 2 0 17 2 1889.0054 P13639;F5H370;B4DPU3;B4DMC6 P13639 16 32 EEF2 Elongation factor 2 yes no 4 0.027931 37.477 By MS/MS By matching By matching By matching By matching By matching 1 1675700 1675700 0 0 0 0 0 3669 833 3711 16383 10890 10890 1 KANNSQEPSPQLASSVASTR ESEADNTKKANNSQEP ASSVASTRSMPESLDS K K A T R S 3 1 2 0 0 2 1 0 0 0 1 1 0 0 2 5 1 0 0 1 0 20 1 2071.0294 H0Y8Y3;F5H7Y0;E9PBF5;Q96HC4-4;Q96HC4 H0Y8Y3 48 67 PDLIM5 PDZ and LIM domain protein 5 yes no 3 5.4369E-05 71.853 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 14384000 3448100 1727600 2494100 1600700 2839600 2273800 3670 405 3712 16384;16385;16386;16387;16388;16389 10891;10892;10893;10894;10895;10896 10893 6 KAPAGQEEPGTPPSSPLSAEQLDR HLQAIPAKKAPAGQEE LSAEQLDRIQRNKAAA K K A D R I 3 1 0 1 0 2 3 2 0 0 2 1 0 0 5 3 1 0 0 0 0 24 1 2461.2085 Q68DM5;F5GYA2;P13051-2;P13051 Q68DM5 41 64 DKFZp781L1143;UNG Uracil-DNA glycosylase yes no 3 0.0015458 48.852 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 13993000 3520900 0 3878600 0 3480300 3112900 3671 494 3713 16390;16391;16392;16393 10897;10898;10899;10900 10900 4 KAPGCVLSNPDQK FVLSITGKKAPGCVLS VLSNPDQKGKMRRIDC K K A Q K G 1 0 1 1 1 1 0 1 0 0 1 2 0 0 2 1 0 0 0 1 0 13 1 1412.7082 P08651-4;P08651-5;P08651-3;P08651-2;P08651;F8W9H9 P08651-4 91 103 NFIC Nuclear factor 1 C-type yes no 3 0.00089944 81.278 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 10944000 1344100 2571100 2505000 1569600 2729000 225180 3672 563 3714 16394;16395;16396;16397;16398;16399 10901;10902;10903;10904 10904 4 KAPGCVLSNPDQKGK FVLSITGKKAPGCVLS SNPDQKGKMRRIDCLR K K A G K M 1 0 1 1 1 1 0 2 0 0 1 3 0 0 2 1 0 0 0 1 0 15 2 1597.8246 P08651-4;P08651-5;P08651-3;P08651-2;P08651;F8W9H9 P08651-4 91 105 NFIC Nuclear factor 1 C-type yes no 3;4 1.4933E-14 97.2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 2 3 2 231770000 19831000 34903000 50008000 33850000 33394000 59784000 3673 563 3715 16400;16401;16402;16403;16404;16405;16406;16407;16408;16409;16410;16411;16412;16413;16414 10905;10906;10907;10908;10909;10910;10911;10912;10913;10914;10915;10916;10917 10917 13 KAPIQTYVLGANNQETVK EEYKTGIKKAPIQTYV ANNQETVKYFQDADGC K K A V K Y 2 0 2 0 0 2 1 1 0 1 1 2 0 0 1 0 2 0 1 2 0 18 1 1973.0582 Q69YN2 Q69YN2 62 79 CWF19L1 CWF19-like protein 1 yes yes 3 0.00071148 76.761 By matching By MS/MS By matching By matching By matching By matching 1 1 1740500 0 991820 0 0 0 748640 3674 1220 3716 16415;16416 10918;10919 10919 2 KAQIAIDIK TVYTLCEKKAQIAIDI AQIAIDIKSAKRELKK K K A I K S 2 0 0 1 0 1 0 0 0 3 0 2 0 0 0 0 0 0 0 0 0 9 1 998.61243 F5H7E2;P42285 F5H7E2 724 732 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 2 0.037558 104.22 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 3675 527 3717 16417 10920 10920 1 KAQSLAEQTSDTAGLESSTR EKHHIRVKKAQSLAEQ AGLESSTRSESGTDLR K K A T R S 3 1 0 1 0 2 2 1 0 0 2 1 0 0 0 4 3 0 0 0 0 20 1 2079.008 Q12986;Q12986-2;F5GXD0;Q12986-3 Q12986 120 139 NFX1 Transcriptional repressor NF-X1 yes no 3 0.0020055 46.786 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4890500 787210 1129900 0 820540 0 2152800 3676 1066 3718 16418;16419;16420;16421 10921;10922;10923 10923 3 KAQTSLESQFTDRYPDNLK KKLLRKEKKAQTSLES DRYPDNLKHLYLAEEE K K A L K H 1 1 1 2 0 2 1 0 0 0 2 2 0 1 1 2 2 0 1 0 0 19 2 2240.1073 Q9P031;F8VNY5 Q9P031 76 94 CCDC59 Thyroid transcription factor 1-associated protein 26 yes no 3 0.00038085 80.488 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 12667000 9301200 1752200 0 1613400 0 0 3677 1571 3719 16422;16423;16424;16425 10924;10925;10926 10924 3 KASAEGPLLGPEAAPSGEGAGSK EKKNKKLKKASAEGPL SGEGAGSKGEAVLRPG K K A S K G 5 0 0 0 0 0 3 5 0 0 2 2 0 0 3 3 0 0 0 0 0 23 1 2080.0437 C9JQV0;Q9BRJ6 C9JQV0 21 43 C7orf50 Uncharacterized protein C7orf50 yes no 3 0.003346 41.16 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3377300 809900 1378800 0 0 0 1188700 3678 266 3720 16426;16427;16428 10927 10927 1 KASFASASAEVGK ERKKKCPKKASFASAS SASAEVGKKGKKKCQK K K A G K K 4 0 0 0 0 0 1 1 0 0 0 2 0 1 0 3 0 0 0 1 0 13 1 1251.6459 E9PPY3;O43159 E9PPY3 78 90 RRP8 Ribosomal RNA-processing protein 8 yes no 2;3 4.1778E-24 113.37 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 2 2 74310000 9437000 11542000 20822000 5821600 8863900 17823000 3679 462 3721 16429;16430;16431;16432;16433;16434;16435;16436;16437;16438;16439;16440;16441;16442 10928;10929;10930;10931;10932;10933;10934;10935;10936;10937;10938;10939;10940;10941 10930 14 KASGDKETPPAEGEGHEAPIAK EISNLLNKKASGDKET GHEAPIAKKEISLPIL K K A A K K 4 0 0 1 0 0 4 3 1 1 0 3 0 0 3 1 1 0 0 0 0 22 2 2218.0866 Q5TCZ1-2;F5GZJ6;F5GZ35;B7Z9C6;H0Y507;Q5TCZ1-3;Q5TCZ1;F8WCK5 Q5TCZ1-2 161 182 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 4 0.018771 34.843 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 4726900 0 1044700 888610 679250 856560 1257800 3680 199 3722 16443;16444;16445;16446;16447 10942 10942 1 KASGPPVSELITK KSAGAAKRKASGPPVS PVSELITKAVAASKER R K A T K A 1 0 0 0 0 0 1 1 0 1 1 2 0 0 2 2 1 0 0 1 0 13 1 1325.7555 P16403;P10412;P16402 P10412 34 46 HIST1H1C;HIST1H1E;HIST1H1D Histone H1.2;Histone H1.4;Histone H1.3 no no 2;3 0.00068112 84.173 By MS/MS By MS/MS By matching By matching By MS/MS By matching 2 1 1 2 1 45117000 22069000 2363700 1499700 0 14708000 4476800 3681 818;843 3723 16448;16449;16450;16451;16452;16453;16454 10943;10944;10945;10946 10943 3 KASNSIISCFNNAPPAK LSISKNKKKASNSIIS FNNAPPAKLACPVCSK K K A A K L 3 0 3 0 1 0 0 0 0 2 0 2 0 1 2 3 0 0 0 0 0 17 1 1817.9094 Q9Y2M0-2;Q9Y2M0;H3BQ24 Q9Y2M0-2 25 41 FAN1 Fanconi-associated nuclease 1 yes no 3 0.031533 32.858 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3536500 815880 0 0 1623200 0 1097400 3682 1634 3724 16455;16456;16457 10947 10947 1 KASVLYIEGHMNPK KSVRQRDKKASVLYIE IEGHMNPKMKGFTVSL K K A P K M 1 0 1 0 0 0 1 1 1 1 1 2 1 0 1 1 0 0 1 1 0 14 1 1585.8286 Q2TAK8;Q2TAK8-2 Q2TAK8 438 451 MUM1 PWWP domain-containing protein MUM1 yes no 3 0.0021645 58.079 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 17526000 0 0 2567700 0 3025900 11932000 3683 1161 3725 16458;16459;16460 10948;10949;10950;10951 10951 4 KATAYILSVQAEEQK APKVVILKKATAYILS SVQAEEQKLISEEDLL K K A Q K L 3 0 0 0 0 2 2 0 0 1 1 2 0 0 0 1 1 0 1 1 0 15 1 1677.8938 B4E1N7;P01106;H0YBT0;P01106-2 B4E1N7 379 393 MYC Myc proto-oncogene protein yes no 3 0.0019797 55.782 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 4039100 1448300 1351300 0 0 1239500 0 3684 158 3726 16461;16462;16463 10952;10953;10954 10954 3 KATQFVYSYGRGPK DPRGAKPKKATQFVYS YSYGRGPKVKGKLKCE K K A P K V 1 1 0 0 0 1 0 2 0 0 0 2 0 1 1 1 1 0 2 1 0 14 2 1600.8362 Q12986;Q12986-2;F5GXD0;Q12986-3 Q12986 170 183 NFX1 Transcriptional repressor NF-X1 yes no 3 0.027346 52.008 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 8632700 0 1056500 652560 0 1263200 5660500 3685 1066 3727 16464;16465;16466;16467 10955 10955 1 KATTVAGVPCQEWAAQEPHQHSIFTPETNPQSGLER TGKSYRGKKATTVAGV NPQSGLERNYCRNPDG K K A E R N 4 1 1 0 1 4 4 2 2 1 1 1 0 1 4 2 4 1 0 2 0 36 1 4000.9126 CON__P06868 CON__P06868 497 532 yes yes 5 0.011295 18.58 By matching By matching By matching By matching By MS/MS By matching 1 4631700 0 0 0 0 4631700 0 + 3686 295 3728 16468 10956 10956 1 KAVEQIRNILK ANTMENVKKAVEQIRN EQIRNILKQGIETPED K K A L K Q 1 1 1 0 0 1 1 0 0 2 1 2 0 0 0 0 0 0 0 1 0 11 2 1310.8034 Q15637-6;Q15637-4;Q15637-3;Q15637-2;Q15637 Q15637-6 217 227 SF1 Splicing factor 1 no no 2;3 0.0085469 96.334 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 2 3 2 166590000 0 2831400 29131000 35932000 37702000 60990000 3687 1141 3729 16469;16470;16471;16472;16473;16474;16475;16476;16477 10957;10958;10959 10959 3 KAVIFCLSADK PEEIKKRKKAVIFCLS IFCLSADKKCIIVEEG K K A D K K 2 0 0 1 1 0 0 0 0 1 1 2 0 1 0 1 0 0 0 1 0 11 1 1250.6693 P60981;P60981-2;F6RFD5 P60981 34 44 DSTN Destrin yes no 3 0.0020795 79.23 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 6446300 2406400 1346800 0 0 0 2693100 3688 980 3730 16478;16479;16480 10960;10961;10962;10963 10963 4 KAVLFCLSEDK PEEVKKRKKAVLFCLS LFCLSEDKKNIILEEG K K A D K K 1 0 0 1 1 0 1 0 0 0 2 2 0 1 0 1 0 0 0 1 0 11 1 1308.6748 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 34 44 CFL1 Cofilin-1 yes no 2;3 2.3296E-19 121.21 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 2 1 2 2 95652000 14215000 3170400 53004000 2159300 9094600 14008000 3689 461 3731 16481;16482;16483;16484;16485;16486;16487;16488;16489 10964;10965;10966;10967;10968;10969;10970 10966 6 KAVLFCLSEDKK PEEVKKRKKAVLFCLS FCLSEDKKNIILEEGK K K A K K N 1 0 0 1 1 0 1 0 0 0 2 3 0 1 0 1 0 0 0 1 0 12 2 1436.7697 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 34 45 CFL1 Cofilin-1 yes no 3 0.017745 63.662 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 14687000 0 2158900 3992200 883850 0 7652100 3690 461 3732 16490;16491;16492;16493 10971 10971 1 KAVVLPGGTATSPK LMAASVARKAVVLPGG GGTATSPKMIAKNVLG R K A P K M 2 0 0 0 0 0 0 2 0 0 1 2 0 0 2 1 2 0 0 2 0 14 1 1324.7715 H0Y5I5;F8WCX2;Q8N1G0-2;Q8N1G0 H0Y5I5 25 38 ZNF687 Zinc finger protein 687 yes no 3 0.0051808 51.03 By matching By matching By matching By matching By matching By MS/MS 1 1 1006500 0 324800 0 0 0 681730 3691 568 3733 16494;16495 10972 10972 1 KAVVQSPQVTEVL AEAEAFLKKAVVQSPQ SPQVTEVL________ K K A V L - 1 0 0 0 0 2 1 0 0 0 1 1 0 0 1 1 1 0 0 4 0 13 1 1396.7926 Q3KQU3-2;Q3KQU3-4;Q3KQU3;A1L1B7;Q3KQU3-3 Q3KQU3-2 791 803 MAP7D1 MAP7 domain-containing protein 1 yes no 2 0.0029422 92.781 By matching By matching By matching By matching By matching By MS/MS 1 13249000 0 0 0 0 0 13249000 3692 1165 3734 16496 10973 10973 1 KAVVVPARSEALGK EKKETTVKKAVVVPAR ARSEALGKEAACESST K K A G K E 3 1 0 0 0 0 1 1 0 0 1 2 0 0 1 1 0 0 0 3 0 14 2 1423.8511 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 481 494 DIDO1 Death-inducer obliterator 1 yes no 3 0.0014432 87.719 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 45328000 5817000 7916700 10718000 5101700 6028600 9745600 3693 1447 3735 16497;16498;16499;16500;16501;16502 10974;10975;10976;10977 10975 4 KCAGCTNPISGLGGTK CFCDLYAKKCAGCTNP ISGLGGTKYISFEERQ K K C T K Y 1 0 1 0 2 0 0 4 0 1 1 2 0 0 1 1 2 0 0 0 0 16 1 1619.776 Q14192 Q14192 220 235 FHL2 Four and a half LIM domains protein 2 yes yes 3 0.0052079 45.342 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 6264000 1005900 1715900 0 826020 1028800 1687300 3694 1101 3736 16503;16504;16505;16506;16507 10978;10979;10980 10979 3 KCGYPGHLTFECR DSVRAGCKKCGYPGHL GHLTFECRNFLRVDPK K K C C R N 0 1 0 0 2 0 1 2 1 0 1 1 0 1 1 0 1 0 1 0 0 13 1 1623.7286 Q8N9Q2 Q8N9Q2 17 29 SREK1IP1 Protein SREK1IP1 yes yes 3 0.0022901 62.162 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 4812600 0 417480 968640 507800 1169400 1749200 3695 1311 3737 16508;16509;16510;16511;16512 10981;10982 10981 2 KCLAPIANTTNGQGCTDYVSEVVK NSVQDGEKKCLAPIAN DYVSEVVKKGAEGIEE K K C V K K 2 0 2 1 2 1 1 2 0 1 1 2 0 0 1 1 3 0 1 3 0 24 1 2624.2574 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 1109 1132 SETX Probable helicase senataxin yes no 3 1.8763E-09 65.854 By matching By MS/MS By matching By matching By matching By matching 1 18486000 0 18486000 0 0 0 0 3696 1250 3738 16513 10983 10983 1 KCPFTGNVSIR IEGTYIDKKCPFTGNV FTGNVSIRGRILSGVV K K C I R G 0 1 1 0 1 0 0 1 0 1 0 1 0 1 1 1 1 0 0 1 0 11 1 1277.655 P62280 P62280 59 69 RPS11 40S ribosomal protein S11 yes yes 3 0.0076835 79.23 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2 1 6611800 0 559490 675620 906040 2516400 1954200 3697 989 3739 16514;16515;16516;16517;16518;16519 10984;10985 10985 2 KCSETPEQVPAAPQAPGVENPPEADCMIGTGK RWEFCNLKKCSETPEQ DCMIGTGKSYRGKKAT K K C G K S 4 0 1 1 2 2 4 3 0 1 0 2 1 0 6 1 2 0 0 2 0 32 1 3364.5374 CON__P06868 CON__P06868 460 491 yes yes 3 0.035156 21.097 By MS/MS By matching By matching By matching By matching By matching 1 12777000 12777000 0 0 0 0 0 + 3698 295 3740 16520 10986 10986 1 KCSLPAEEDSVLEK ETVTGTGKKCSLPAEE EEDSVLEKLGERKPCN K K C E K L 1 0 0 1 1 0 3 0 0 0 2 2 0 0 1 2 0 0 0 1 0 14 1 1603.7763 E7EVA0;P27816-6;P27816 E7EVA0 651 664 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 3.454E-104 145.49 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 2 1 43465000 9040400 3473300 6034200 7705800 9472700 7738600 3699 388 3741 16521;16522;16523;16524;16525;16526;16527 10987;10988;10989 10989 2 KCVSCQNLNPSNK LKNASTAKKCVSCQNL QNLNPSNKELVGPPLA K K C N K E 0 0 3 0 2 1 0 0 0 0 1 2 0 0 1 2 0 0 0 1 0 13 1 1547.7184 P49792 P49792 1371 1383 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 3 0.013012 46.318 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 5472500 921670 1250900 641140 547200 800740 1310900 3700 945 3742 16528;16529;16530;16531;16532;16533 10990;10991 10990 2 KDAPPLLPSDTGQGYRTVK YALLYSDKKDAPPLLP GQGYRTVKAKLGSKKV K K D V K A 1 1 0 2 0 1 0 2 0 0 2 2 0 0 3 1 2 0 1 1 0 19 2 2042.0797 Q5TG40;Q9NPF5;Q5TG37;Q5TG38 Q5TG40 66 84 DMAP1 DNA methyltransferase 1-associated protein 1 yes no 3 0.026205 42.395 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5367300 873240 777700 0 0 1426200 2290200 3701 1198 3743 16534;16535;16536;16537 10992 10992 1 KDDEENYLDLFSHK KIQKGDSKKDDEENYL YLDLFSHKNMKLKERV K K D H K N 0 0 1 3 0 0 2 0 1 0 2 2 0 1 0 1 0 0 1 0 0 14 1 1751.8002 Q07666;Q07666-3;Q07666-2;E7ET98 Q07666 139 152 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 3 2.3097E-295 186.29 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 258100000 0 136720000 0 121380000 0 0 3702 1045 3744 16538;16539 10993;10994 10993 2 KDDEENYLDLFSHKNMK KIQKGDSKKDDEENYL LFSHKNMKLKERVLIP K K D M K L 0 0 2 3 0 0 2 0 1 0 2 3 1 1 0 1 0 0 1 0 0 17 2 2124.9786 Q07666;Q07666-3;Q07666-2;E7ET98 Q07666 139 155 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 4 1.2269E-05 88.951 By matching By matching By matching By matching By matching By MS/MS 1 20340000 0 0 0 0 0 20340000 3703 1045 3745 16540 10995 10995 1 KDDINLLPSK NRYHLRSKKDDINLLP DINLLPSKSSVTKICR K K D S K S 0 0 1 2 0 0 0 0 0 1 2 2 0 0 1 1 0 0 0 0 0 10 1 1141.6343 Q9ULW0 Q9ULW0 348 357 TPX2 Targeting protein for Xklp2 yes yes 2 3.0795E-191 182.71 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 153740000 15795000 22989000 24721000 9561300 16619000 64054000 3704 1611 3746 16541;16542;16543;16544;16545;16546 10996;10997;10998 10998 3 KDDINLLPSKSSVTK NRYHLRSKKDDINLLP PSKSSVTKICRDPQTP K K D T K I 0 0 1 2 0 0 0 0 0 1 2 3 0 0 1 3 1 0 0 1 0 15 2 1643.9094 Q9ULW0 Q9ULW0 348 362 TPX2 Targeting protein for Xklp2 yes yes 3 0.011321 56.29 By matching By MS/MS By matching By matching By matching By matching 1 1 6253500 5052200 1201300 0 0 0 0 3705 1611 3747 16547;16548 10999 10999 1 KDDIPEEDKGNVK CAERETKKKDDIPEED EEDKGNVKQCEINYVK K K D V K Q 0 0 1 3 0 0 2 1 0 1 0 3 0 0 1 0 0 0 0 1 0 13 2 1485.7311 Q14331;E9PLY7;Q9BZ01 Q14331 191 203 FRG1;FRG1B Protein FRG1;Protein FRG1B yes no 3 0.0037797 76.728 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 2899300 0 811980 661530 0 0 1425700 3706 1106 3748 16549;16550;16551 11000;11001 11001 2 KDEDPENKIEFK EKPQKETKKDEDPENK PENKIEFKTRLGRNVY K K D F K T 0 0 1 2 0 0 3 0 0 1 0 3 0 1 1 0 0 0 0 0 0 12 2 1490.7253 Q13123;Q9H4P6;E7EQZ7;D6REL4 Q13123 198 209 IK Protein Red yes no 3 0.034755 58.04 By matching By matching By matching By matching By matching By MS/MS 1 1237700 0 0 0 0 0 1237700 3707 1071 3749 16552 11002 11002 1 KDEEEDMSLD KEGDTKDKKDEEEDMS EEEDMSLD________ K K D L D - 0 0 0 3 0 0 3 0 0 0 1 1 1 0 0 1 0 0 0 0 0 10 1 1209.4707 Q16186 Q16186 398 407 ADRM1 Proteasomal ubiquitin receptor ADRM1 yes yes 2 0.010043 102.52 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 5532400 0 448020 1330100 830520 1809600 1114100 3708 1151 3750 16553;16554;16555;16556;16557 11003;11004 11003 2 KDEISVDSLDFNK VCASGKRKKDEISVDS VDSLDFNKKILHTAWH K K D N K K 0 0 1 3 0 0 1 0 0 1 1 2 0 1 0 2 0 0 0 1 0 13 1 1508.7359 P63151;P63151-2;E5RFR9;A8MZB4;Q66LE6 P63151 405 417 PPP2R2A;PPP2R2D Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform yes no 3 0.025577 39.776 By MS/MS By matching By matching By matching By matching By matching 1 5989200 5989200 0 0 0 0 0 3709 1003 3751 16558 11005 11005 1 KDEISVDSLDFNKK VCASGKRKKDEISVDS DSLDFNKKILHTAWHP K K D K K I 0 0 1 3 0 0 1 0 0 1 1 3 0 1 0 2 0 0 0 1 0 14 2 1636.8308 P63151;P63151-2;E5RFR9;A8MZB4;Q66LE6 P63151 405 418 PPP2R2A;PPP2R2D Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform yes no 3 8.2614E-104 147.51 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 19055000 12060000 2413600 0 2394600 0 2187200 3710 1003 3752 16559;16560;16561;16562 11006;11007;11008;11009;11010 11010 5 KDESQEGKQQYLQSIEER SIEPYLKKKDESQEGK YLQSIEEREKLDGLYE K K D E R E 0 1 0 1 0 4 4 1 0 1 1 2 0 0 0 2 0 0 1 0 0 18 2 2194.0502 P21912 P21912 160 177 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 4 0.0013684 59.502 By matching By matching By MS/MS By matching By matching By matching 1 1 2278800 1113000 0 1165700 0 0 0 3711 861 3753 16563;16564 11011 11011 1 KDGDMHSSSLTVECSK EEQSNDGKKDGDMHSS SLTVECSKTSEIEPKN K K D S K T 0 0 0 2 1 0 1 1 1 0 1 2 1 0 0 4 1 0 0 1 0 16 1 1779.7767 Q12888;Q12888-2;A6NNK5;F8VY86;C9JXV0 Q12888 476 491 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 6.0402E-51 122.46 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 25355000 1235900 3076200 4351400 1696700 2437600 12557000 3712 1063 3754 16565;16566;16567;16568;16569;16570 11012;11013 11013 2 KDGFYRQVNQISGAHNTSDK VWDTRCNKKDGFYRQV GAHNTSDKQTPSKPKK K K D D K Q 1 1 2 2 0 2 0 2 1 1 0 2 0 1 0 2 1 0 1 1 0 20 2 2264.0934 F5GZ90;Q9NZJ0;Q9NZJ0-2 F5GZ90 133 152 DTL Denticleless protein homolog yes no 4 0.038804 32.353 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3742500 0 458720 1200400 0 0 2083400 3713 499 3755 16571;16572;16573 11014 11014 1 KDKEVIQLK KFRQWKQKKDKEVIQL DKEVIQLKERDRKRQY K K D L K E 0 0 0 1 0 1 1 0 0 1 1 3 0 0 0 0 0 0 0 1 0 9 2 1099.6601 O95239;O95239-2;Q2VIQ3 O95239 668 676 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 1;2 3.3705E-19 130.66 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 36088000000 0 0 3585700000 6438100000 25293000000 771700000 3714 768 3756 16574;16575;16576;16577;16578 11015;11016;11017;11018 11018 4 KDLCNTHLMR PEGWKLLKKDLCNTHL LCNTHLMRVLVQTLCE K K D M R V 0 1 1 1 1 0 0 0 1 0 2 1 1 0 0 0 1 0 0 0 0 10 1 1286.6224 P78527;E7EUY0;P78527-2 P78527 1361 1370 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 0.0016482 90.827 By matching By matching By matching By matching By matching By MS/MS 1 1 1 14912000 0 0 921580 1005300 0 12985000 3715 1012 3757 16579;16580;16581 11019 11019 1 KDLEDGEVPQHAGK GRPIKPPKKDLEDGEV EVPQHAGKKGKLSEHL K K D G K K 1 0 0 2 0 1 2 2 1 0 1 2 0 0 1 0 0 0 0 1 0 14 1 1521.7423 Q15059-2;Q15059 Q15059-2 291 304 BRD3 Bromodomain-containing protein 3 yes no 3 0.0023617 57.434 By matching By matching By matching By matching By matching By MS/MS 1 1632800 0 0 0 0 0 1632800 3716 1129 3758 16582 11020 11020 1 KDNQESSDAELSSSEYIK FPSSKKLKKDNQESSD LSSSEYIKTDLDAMDI K K D I K T 1 0 1 2 0 1 3 0 0 1 1 2 0 0 0 5 0 0 1 0 0 18 1 2028.9124 Q96JM3 Q96JM3 621 638 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.0014628 51.225 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 6147700 0 2128100 1228500 0 949670 1841300 3717 1399 3759 16583;16584;16585;16586 11021;11022;11023;11024;11025 11025 5 KDPETYEVDSGTTK KPKKKKKKKDPETYEV EVDSGTTKLADDADDT K K D T K L 0 0 0 2 0 0 2 1 0 0 0 2 0 0 1 1 3 0 1 1 0 14 1 1568.7206 Q3B726 Q3B726 233 246 TWISTNB DNA-directed RNA polymerase I subunit RPA43 yes yes 2;3 2.5743E-29 109.48 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 3 32940000 1735600 4585400 2682100 1836300 8743100 13358000 3718 1164 3760 16587;16588;16589;16590;16591;16592;16593;16594;16595;16596;16597;16598;16599 11026;11027;11028;11029;11030;11031;11032;11033;11034 11030 9 KDPNFKGFSGAGEK GEGFQFGKKDPNFKGF GFSGAGEKLFSSQYGK K K D E K L 1 0 1 1 0 0 1 3 0 0 0 3 0 2 1 1 0 0 0 0 0 14 2 1480.731 P49792;E9PGT0;P0DJD0;P0DJD1;F8VYC4;Q7Z3J3;B4DZH4 P49792 1964 1977 RANBP2;RGPD1;RGPD2;RGPD4 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 4 no no 3 0.0037664 84.62 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 34903000 8054400 5819800 5208500 3478900 6551700 5790100 3719 945;1251 3761 16600;16601;16602;16603;16604;16605;16606 11035;11036;11037;11038;11039;11040 11039 6 KDPQGLGLHFYK LSLTAAEKKDPQGLGL GLGLHFYKHGEPEEDI K K D Y K H 0 0 0 1 0 1 0 2 1 0 2 2 0 1 1 0 0 0 1 0 0 12 1 1401.7405 E9PF10;O75694-2;B4DLT2;O75694 E9PF10 876 887 NUP155 Nuclear pore complex protein Nup155 yes no 3 1.346E-97 150.06 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 3 1 319270000 21674000 25891000 52567000 23062000 80655000 115420000 3720 100 3762 16607;16608;16609;16610;16611;16612;16613;16614;16615 11041;11042;11043;11044;11045;11046;11047;11048 11046 8 KDPSGASNPSADSPLHRGVHGK AKGGPESRKDPSGASN LHRGVHGKTGQLEGAP R K D G K T 2 1 1 2 0 0 0 3 2 0 1 2 0 0 3 4 0 0 0 1 0 22 2 2213.0937 B7ZAP5;P55317 B7ZAP5 262 283 FOXA1 Hepatocyte nuclear factor 3-alpha yes no 4 0.0062528 42.052 By matching By MS/MS By matching By matching By matching By matching 1 1 1845500 0 1421800 423710 0 0 0 3721 201 3763 16616;16617 11049 11049 1 KDQVTAQEIFQDNHEDGPTAK FPLIEAKKKDQVTAQE HEDGPTAKKLKTEQGG K K D A K K 2 0 1 3 0 3 2 1 1 1 0 2 0 1 1 0 2 0 0 1 0 21 1 2370.1088 P13010 P13010 545 565 XRCC5 X-ray repair cross-complementing protein 5 yes yes 3;4 1.4005E-09 85.177 By MS/MS By matching By matching By matching By matching By MS/MS 2 1 2 2 2 2 32810000 13275000 1215600 4836200 3730300 2629800 7123500 3722 830 3764 16618;16619;16620;16621;16622;16623;16624;16625;16626;16627;16628 11050;11051;11052 11052 3 KDQYFLDK LRRVIGAKKDQYFLDK KDQYFLDKKMVTKNDV K K D D K K 0 0 0 2 0 1 0 0 0 0 1 2 0 1 0 0 0 0 1 0 0 8 1 1055.5288 Q9UQE7 Q9UQE7 106 113 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 6.059E-09 123.86 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 6815800 1255300 918170 0 1128600 1334500 2179200 3723 1625 3765 16629;16630;16631;16632;16633 11053;11054;11055 11054 3 KDSEDMGVVVSLGTGNR ILAAIIMKKDSEDMGV VSLGTGNRCVKGDSLS K K D N R C 0 1 1 2 0 0 1 3 0 0 1 1 1 0 0 2 1 0 0 3 0 17 1 1762.852 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 876 892 ADAR Double-stranded RNA-specific adenosine deaminase no no 3 0.011083 55.437 By matching By matching By matching By matching By matching By MS/MS 1 3482000 0 0 0 0 0 3482000 3724 352;968 3766 16634 11056 11056 0 KDSEDMGVVVSLGTGNRCVK ILAAIIMKKDSEDMGV GTGNRCVKGDSLSLKG K K D V K G 0 1 1 2 1 0 1 3 0 0 1 2 1 0 0 2 1 0 0 4 0 20 2 2150.046 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 876 895 ADAR Double-stranded RNA-specific adenosine deaminase no no 3 0.00065063 63.936 By matching By matching By matching By matching By MS/MS By matching 1 1 7733500 0 0 1974400 0 5759100 0 3725 352;968 3767 16635;16636 11057 11057 1 KDSVFTSMFHSVRR LAPELHPKKDSVFTSM SMFHSVRRVLADPEIP K K D R R V 0 2 0 1 0 0 0 0 1 0 0 1 1 2 0 3 1 0 0 2 0 14 2 1695.8515 Q14146 Q14146 1195 1208 URB2 Unhealthy ribosome biogenesis protein 2 homolog yes yes 4 0.015641 46.282 By matching By matching By matching By matching By matching By MS/MS 1 2757600 0 0 0 0 0 2757600 3726 1095 3768 16637 11058 11058 1 KDTAASGYGTQNIR VYTYHEKKKDTAASGY GYGTQNIRLSRDAVKD K K D I R L 2 1 1 1 0 1 0 2 0 1 0 1 0 0 0 1 2 0 1 0 0 14 1 1480.727 Q9Y314 Q9Y314 21 34 NOSIP Nitric oxide synthase-interacting protein yes yes 3 0.00057376 79.652 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 6522200 0 959050 1030300 0 1198900 3333900 3727 1642 3769 16638;16639;16640;16641 11059;11060;11061 11059 2 KDTVCQICESSGDSLIPCEGECCK RRGTGMSKKDTVCQIC PCEGECCKHFHLECLG K K D C K H 0 0 0 2 5 1 3 2 0 2 1 2 0 0 1 3 1 0 0 1 0 24 1 2831.154 Q9BZ95-4;C9JY66;Q9BZ95-2;B7ZL11;Q9BZ95 Q9BZ95-4 637 660 WHSC1L1 Histone-lysine N-methyltransferase NSD3 yes no 3 0.039882 25.819 By matching By matching By matching By MS/MS By matching By matching 1 2622200 0 0 0 2622200 0 0 3728 210 3770 16642 11062 11062 1 KDVETTSSVSVK SESRNLEKKDVETTSS TTSSVSVKRKRRLEDA K K D V K R 0 0 0 1 0 0 1 0 0 0 0 2 0 0 0 3 2 0 0 3 0 12 1 1278.6667 Q96RL1;F8VQY2;Q96RL1-2;D6RC40;D6RCQ3;D6RCF3;Q96RL1-5;D6RDZ5;D6R9M3 Q96RL1 20 31 UIMC1 BRCA1-A complex subunit RAP80 yes no 3 0.0083883 53.869 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 4530000 561700 772080 2147500 266240 0 782400 3729 535 3771 16643;16644;16645;16646;16647 11063 11063 1 KDVETTSSVSVKR SESRNLEKKDVETTSS TSSVSVKRKRRLEDAF K K D K R K 0 1 0 1 0 0 1 0 0 0 0 2 0 0 0 3 2 0 0 3 0 13 2 1434.7678 Q96RL1;F8VQY2;Q96RL1-2;D6RC40;D6RCQ3;D6RCF3;Q96RL1-5;D6RDZ5 Q96RL1 20 32 UIMC1 BRCA1-A complex subunit RAP80 yes no 3 0.025609 57.434 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 2308700 351370 746680 623220 0 202950 384440 3730 535 3772 16648;16649;16650;16651;16652 11064 11064 1 KDVFMPPSSSSELQESR LRTRSKCKKDVFMPPS SSELQESRGLSNFTST K K D S R G 0 1 0 1 0 1 2 0 0 0 1 1 1 1 2 5 0 0 0 1 0 17 1 1922.9044 O95243-2 O95243-2 186 202 MBD4 Methyl-CpG-binding domain protein 4 no no 3 0.0033047 46.133 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 6537300 0 826660 0 2494700 507850 2708200 3731 769 3773 16653;16654;16655;16656 11065;11066;11067 11066 3 KDVPDSQQHPAPEK SRPVKPPKKDVPDSQQ QQHPAPEKSSKVSEQL K K D E K S 1 0 0 2 0 2 1 0 1 0 0 2 0 0 3 1 0 0 0 1 0 14 1 1574.7689 O60885-2;Q4G0X8;O60885 O60885-2 333 346 BRD4 Bromodomain-containing protein 4 yes no 3 2.5826E-13 105.19 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 3115500 0 887460 1318700 0 70003 839410 3732 735 3774 16657;16658;16659;16660 11068;11069;11070 11068 3 KDYNEAYNYYTK QGNAYYAKKDYNEAYN EAYNYYTKAIDMCPKN K K D T K A 1 0 2 1 0 0 1 0 0 0 0 2 0 0 0 0 1 0 4 0 0 12 1 1570.694 Q99615 Q99615 42 53 DNAJC7 DnaJ homolog subfamily C member 7 yes yes 3 0.01598 47.242 By matching By MS/MS By matching By matching By matching By matching 1 1 2152200 0 1286700 0 0 865520 0 3733 1430 3775 16661;16662 11071 11071 1 KEAGEGGEAEAPAAEGGK GFSFKKNKKEAGEGGE APAAEGGKDEAAGGAA K K E G K D 5 0 0 0 0 0 5 5 0 0 0 2 0 0 1 0 0 0 0 0 0 18 1 1656.7591 P29966 P29966 176 193 MARCKS Myristoylated alanine-rich C-kinase substrate yes yes 3 0.00089142 63.302 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 4989800 390380 754770 1667300 344880 475800 1356600 3734 886 3776 16663;16664;16665;16666;16667;16668 11072;11073;11074;11075 11072 4 KEAQELSQNSAIK TIIFCETKKEAQELSQ LSQNSAIKQDAQSLHG K K E I K Q 2 0 1 0 0 2 2 0 0 1 1 2 0 0 0 2 0 0 0 0 0 13 1 1444.7522 Q9NR30;Q9NR30-2 Q9NR30 449 461 DDX21 Nucleolar RNA helicase 2 yes no 3 0.00055941 90.689 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 21006000 0 2994200 2092800 825860 8480400 6612900 3735 1534 3777 16669;16670;16671;16672;16673 11076;11077;11078 11077 3 KEAVAPVQEESDLEK KKKETDQKKEAVAPVQ QEESDLEKKRREAEAL K K E E K K 2 0 0 1 0 1 4 0 0 0 1 2 0 0 1 1 0 0 0 2 0 15 1 1670.8363 E9PGG1;E7EU01;E7EUM4;E7ERR6;E7ERH4;E7ET01;E7ETL8;E7EQU2;E7ESD3;E7EMU4;E7EV09;E7EQL5;Q13409-6;Q13409-3;B7ZA04;Q13409-2;Q13409-5;Q13409;F8W8S0 E9PGG1 41 55 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 yes no 3 0.0012817 60.549 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 4681600 1104000 885840 755490 948040 988240 0 3736 200 3778 16674;16675;16676;16677;16678 11079;11080;11081;11082;11083 11083 5 KEDINLSVRK QRGSSTAKKEDINLSV DINLSVRKLLNRHNIV K K E R K L 0 1 1 1 0 0 1 0 0 1 1 2 0 0 0 1 0 0 0 1 0 10 2 1200.6826 Q15645;Q15645-2;H0YAL2 Q15645 35 44 TRIP13 Pachytene checkpoint protein 2 homolog yes no 3 8.3005E-24 129.88 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 7764900 328290 1003300 1847700 595880 800720 3189100 3737 1142 3779 16679;16680;16681;16682;16683;16684 11084;11085 11085 2 KEEAEIQAELER KLRLGHLKKEEAEIQA EIQAELERLERVRNLH K K E E R L 2 1 0 0 0 1 5 0 0 1 1 1 0 0 0 0 0 0 0 0 0 12 1 1443.7205 Q86UE8-3;Q86UE8-2;Q86UE8;Q9UKI8-3;Q9UKI8-4;Q9UKI8-5;Q9UKI8;Q9UKI8-2 Q86UE8-3 364 375 TLK2;TLK1 Serine/threonine-protein kinase tousled-like 2;Serine/threonine-protein kinase tousled-like 1 yes no 3 0.039808 37.793 By matching By matching By matching By matching By matching By MS/MS 1 1354400 0 0 0 0 0 1354400 3738 1262 3780 16685 11086 11086 1 KEEEEEENFPGQASSQQVHSENIK PWGPVKVKKEEEEEEN QVHSENIKVWAPVQGL K K E I K V 1 0 2 0 0 3 7 1 1 1 0 2 0 1 1 3 0 0 0 1 0 24 1 2772.2475 P13682;C9JGR2;C9J011;C9JGS9 P13682 21 44 ZNF35 Zinc finger protein 35 yes no 4 6.9586E-06 59.212 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 6217700 1167200 1009100 0 859400 1734900 1447100 3739 835 3781 16686;16687;16688;16689;16690 11087;11088 11088 1 KEEILSSSDICQK TPNTKRFKKEEILSSS SSSDICQKLVNTQDMS K K E Q K L 0 0 0 1 1 1 2 0 0 2 1 2 0 0 0 3 0 0 0 0 0 13 1 1535.7501 P54278;C9J167;I3L0B5 P54278 581 593 PMS2 Mismatch repair endonuclease PMS2 yes no 3 0.027743 39.068 By matching By MS/MS By matching By matching By matching By matching 1 1 3030200 0 1161500 0 0 0 1868700 3740 966 3782 16691;16692 11089 11089 1 KEENDDDFTFGQSALK TVWGGTCKKEENDDDF TFGQSALKKIKTETYP K K E L K K 1 0 1 3 0 1 2 1 0 0 1 2 0 2 0 1 1 0 0 0 0 16 1 1842.8272 Q8N5C6 Q8N5C6 167 182 SRBD1 S1 RNA-binding domain-containing protein 1 yes yes 2;3 1.7746E-165 160.63 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 157140000 52734000 12021000 40974000 6844200 18463000 26103000 3741 1302 3783 16693;16694;16695;16696;16697;16698;16699 11090;11091;11092;11093;11094;11095 11094 6 KEENDDDFTFGQSALKK TVWGGTCKKEENDDDF FGQSALKKIKTETYPQ K K E K K I 1 0 1 3 0 1 2 1 0 0 1 3 0 2 0 1 1 0 0 0 0 17 2 1970.9222 Q8N5C6 Q8N5C6 167 183 SRBD1 S1 RNA-binding domain-containing protein 1 yes yes 3 0.0072493 53.565 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 9116100 3648900 0 0 0 1437500 4029700 3742 1302 3784 16700;16701;16702 11096;11097;11098 11096 3 KEESFVCEHPSK VTLTPDSKKEESFVCE FVCEHPSKKECVQIIT K K E S K K 0 0 0 0 1 0 3 0 1 0 0 2 0 1 1 2 0 0 0 1 0 12 1 1475.6715 C9J5X9;Q8NB91 C9J5X9 560 571 FANCB Fanconi anemia group B protein yes no 3 0.0029686 63.602 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 2144000 0 499450 519690 0 274320 850590 3743 230 3785 16703;16704;16705;16706 11099;11100 11100 2 KEESTTGNANLLEK EREAAKAKKEESTTGN GNANLLEKTGGVDFHM K K E E K T 1 0 2 0 0 0 3 1 0 0 2 2 0 0 0 1 2 0 0 0 0 14 1 1532.7682 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;F5GWN9;F5H540;F5H797;F5H8B8;F5H692;F5H7D5 F5H101 106 119 NOL8 Nucleolar protein 8 yes no 2;3 2.1421E-30 117.48 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 2 1 19274000 8086400 0 10473000 0 714420 0 3744 27 3786 16707;16708;16709;16710 11101;11102;11103;11104 11101 4 KEETQPPVALK PSVGVVDKKEETQPPV TQPPVALKKEGIRRVG K K E L K K 1 0 0 0 0 1 2 0 0 0 1 2 0 0 2 0 1 0 0 1 0 11 1 1238.6871 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51 92 102 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein no no 2;3 0.0024162 95.618 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 3 2 2 2 2 2 41214000 5144900 3667100 6187400 2514200 6963400 16737000 3745 1316;1317 3787 16711;16712;16713;16714;16715;16716;16717;16718;16719;16720;16721;16722;16723 11105;11106;11107;11108;11109;11110;11111;11112 11109 8 KEETQPPVALKK PSVGVVDKKEETQPPV QPPVALKKEGIRRVGR K K E K K E 1 0 0 0 0 1 2 0 0 0 1 3 0 0 2 0 1 0 0 1 0 12 2 1366.782 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51 92 103 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein no no 3 0.0055777 77.674 By MS/MS By matching By MS/MS By matching By matching By MS/MS 2 1 1 1 1 1 62136000 10485000 11022000 16605000 7273700 4842600 11907000 3746 1316;1317 3788 16724;16725;16726;16727;16728;16729;16730 11113;11114;11115 11113 3 KEFVINPNGK SVQDAPTKKEFVINPN FVINPNGKSEVCILHE K K E G K S 0 0 2 0 0 0 1 1 0 1 0 2 0 1 1 0 0 0 0 1 0 10 1 1144.6241 Q8WYQ5-3;Q8WYQ5 Q8WYQ5-3 501 510 DGCR8 Microprocessor complex subunit DGCR8 yes no 2 0.012304 86.014 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 4052800 1170600 523430 825820 0 0 1532900 3747 1346 3789 16731;16732;16733;16734 11116;11117 11117 2 KEGLNLPSQLAHR HVLSTVCKKEGLNLPS LPSQLAHRLAEKSCRN K K E H R L 1 1 1 0 0 1 1 1 1 0 3 1 0 0 1 1 0 0 0 0 0 13 1 1461.8052 C9JU95;P40938 C9JU95 202 214 RFC3 Replication factor C subunit 3 yes no 3 0.00093579 85.554 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 6995200 1093700 1188200 995530 0 0 3717700 3748 270 3790 16735;16736;16737;16738 11118;11119;11120 11118 3 KEGLNLPSQLAHRLAEK HVLSTVCKKEGLNLPS LAHRLAEKSCRNLRKA K K E E K S 2 1 1 0 0 1 2 1 1 0 4 2 0 0 1 1 0 0 0 0 0 17 2 1903.0639 C9JU95;P40938 C9JU95 202 218 RFC3 Replication factor C subunit 3 yes no 4 0.0028978 51.127 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 15884000 9192900 0 0 6690700 0 0 3749 270 3791 16739;16740 11121;11122 11121 2 KEGQWDCSSCLVR GFEDMFAKKEGQWDCS DCSSCLVRNEANATRC K K E V R N 0 1 0 1 2 1 1 1 0 0 1 1 0 0 0 2 0 1 0 1 0 13 1 1623.7134 P49792 P49792 1543 1555 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 3 0.001155 69.345 By matching By matching By matching By matching By MS/MS By matching 1 3719700 0 0 0 0 3719700 0 3750 945 3792 16741 11123 11123 1 KEGQWDCSSCLVRNEANATR GFEDMFAKKEGQWDCS RNEANATRCVACQNPD K K E T R C 2 2 2 1 2 1 2 1 0 0 1 1 0 0 0 2 1 1 0 1 0 20 2 2380.0648 P49792 P49792 1543 1562 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 4 0.017686 37.157 By matching By matching By MS/MS By matching By matching By matching 1 5255000 0 0 5255000 0 0 0 3751 945 3793 16742 11124 11124 1 KEGQWDCSVCLVR GFEGMFTKKEGQWDCS DCSVCLVRNEASATKC K K E V R N 0 1 0 1 2 1 1 1 0 0 1 1 0 0 0 1 0 1 0 2 0 13 1 1635.7497 P49792 P49792 1606 1618 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 3 2.817E-75 142.39 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 54978000 16232000 5119300 14210000 2438800 4248900 12729000 3752 945 3794 16743;16744;16745;16746;16747;16748 11125;11126;11127;11128 11128 4 KEGQWDCSVCLVRNEASATK GFEGMFTKKEGQWDCS RNEASATKCIACQNPG K K E T K C 2 1 1 1 2 1 2 1 0 0 1 2 0 0 0 2 1 1 0 2 0 20 2 2337.0842 P49792 P49792 1606 1625 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 3;4 0 201.18 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 2 2 233890000 119240000 10244000 64607000 15262000 9927600 14613000 3753 945 3795 16749;16750;16751;16752;16753;16754;16755;16756;16757;16758 11129;11130;11131;11132;11133;11134;11135;11136;11137 11131 8 KEGSDGPLATSKPVPAEK NSKKKGAKKEGSDGPL SKPVPAEKSGLPVGPE K K E E K S 2 0 0 1 0 0 2 2 0 0 1 3 0 0 3 2 1 0 0 1 0 18 2 1809.9472 E9PJS4;P08240 E9PJS4 146 163 SRPR Signal recognition particle receptor subunit alpha yes no 3;4 6.0886E-32 110.34 By matching By matching By MS/MS By MS/MS By MS/MS By matching 2 1 2 2 3 1 21700000 3455100 3130500 3552400 3594000 5789100 2179100 3754 449 3796 16759;16760;16761;16762;16763;16764;16765;16766;16767;16768;16769 11138;11139;11140;11141;11142 11139 5 KEGSWWHCNSCSLK NFEFQVAKKEGSWWHC HCNSCSLKNASTAKKC K K E L K N 0 0 1 0 2 0 1 1 1 0 1 2 0 0 0 3 0 2 0 0 0 14 1 1777.7665 P49792 P49792 1351 1364 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 3 4.5973E-08 97.69 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 29149000 0 242480 5054500 6515300 5817000 11520000 3755 945 3797 16770;16771;16772;16773;16774 11143;11144 11144 2 KEHLDDYGEAPVETDGEHVK INKVPTVKKEHLDDYG ETDGEHVKRTCTSVPE K K E V K R 1 0 0 3 0 0 4 2 2 0 1 2 0 0 1 0 1 0 1 2 0 20 1 2267.0342 P12757-5;P12757;P12757-3;C9J8R9;P12757-4;P12757-2 P12757-5 31 50 SKIL Ski-like protein yes no 4 0.0046126 62.792 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 6883900 1027500 778430 1574000 873140 951620 1679200 3756 829 3798 16775;16776;16777;16778;16779;16780 11145;11146;11147 11146 1 KEIDVISIPSK LNKQELAKKEIDVISI DVISIPSKCLLLVHEP K K E S K C 0 0 0 1 0 0 1 0 0 3 0 2 0 0 1 2 0 0 0 1 0 11 1 1227.7075 B7Z6Q6;Q99661;Q99661-2;Q5JR91;B7Z7M6;Q5JR89 B7Z6Q6 235 245 KIF2C Kinesin-like protein KIF2C yes no 2;3 8.0506E-273 196.5 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 5 2 379930000 52198000 54799000 128770000 22933000 36772000 84460000 3757 193 3799 16781;16782;16783;16784;16785;16786;16787;16788;16789;16790;16791;16792;16793;16794;16795 11148;11149;11150;11151;11152;11153;11154;11155;11156;11157;11158;11159;11160;11161 11154 14 KEKENGFSSPPQIK ASGDAKIKKEKENGFS FSSPPQIKDEPEDDGY K K E I K D 0 0 1 0 0 1 2 1 0 1 0 3 0 1 2 2 0 0 0 0 0 14 2 1587.8257 P11387 P11387 104 117 TOP1 DNA topoisomerase 1 yes yes 3 0.027624 51.939 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 11048000 2903000 1712500 0 0 3575500 2857000 3758 825 3800 16796;16797;16798;16799 11162 11162 1 KEKPAAVATAMAR SLNYTGEKKEKPAAVA AVATAMARVLRETKPI K K E A R V 5 1 0 0 0 0 1 0 0 0 0 2 1 0 1 0 1 0 0 1 0 13 2 1342.7391 H3BP78;Q9NVI1-2;Q9NVI1-1;Q9NVI1 H3BP78 996 1008 FANCI Fanconi anemia group I protein yes no 3 0.0069716 65.809 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 4476000 0 787100 0 766850 1290100 1631900 3759 635 3801 16800;16801;16802;16803 11163 11163 1 KEKPLPVICSTSAASLK KKGPNSGKKEKPLPVI STSAASLKSLTRDRGM K K E L K S 2 0 0 0 1 0 1 0 0 1 2 3 0 0 2 3 1 0 0 1 0 17 2 1828.0128 B4DZR9;Q9UQR0;B4DRC2 B4DZR9 284 300 SCML2 Sex comb on midleg-like protein 2 yes no 4 0.0057325 46.121 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 13866000 2558200 1514900 2387400 1907000 1511100 3987400 3760 149 3802 16804;16805;16806;16807;16808;16809 11164 11164 1 KELGHVNGLVDK RRKKREQKKELGHVNG HVNGLVDKSGKRTTSP K K E D K S 0 0 1 1 0 0 1 2 1 0 2 2 0 0 0 0 0 0 0 2 0 12 1 1307.7197 Q96QT6-2;Q96QT6-3;C9J9G2;Q96QT6 Q96QT6-2 113 124 PHF12 PHD finger protein 12 yes no 3 0.020096 44.829 By matching By matching By MS/MS By matching By matching By matching 1 1 1 2869900 0 0 787470 386420 0 1696000 3761 237 3803 16810;16811;16812 11165 11165 1 KELPSHVQAMHK SQVNHRMKKELPSHVQ SHVQAMHKRKEFLDYQ K K E H K R 1 0 0 0 0 1 1 0 2 0 1 2 1 0 1 1 0 0 0 1 0 12 1 1403.7344 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 2071 2082 SETX Probable helicase senataxin yes no 3 0.0022425 65.179 By matching By matching By MS/MS By matching By matching By matching 1 1 1032300 0 539160 493140 0 0 0 3762 1250 3804 16813;16814 11166;11167 11166 2 KELQGDGPPSSPTNDPTVK PRKYKKKKKELQGDGP PTNDPTVKYETQPRFI K K E V K Y 0 0 1 2 0 1 1 2 0 0 1 2 0 0 4 2 2 0 0 1 0 19 1 1965.9643 Q12873;E9PG89;Q12873-2 Q12873 703 721 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 3 0.025505 32.305 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 8120900 0 2845700 1288600 0 0 3986600 3763 430 3805 16815;16816;16817 11168;11169 11168 2 KELQGDGPPSSPTNDPTVKYETQPR PRKYKKKKKELQGDGP VKYETQPRFITATGGT K K E P R F 0 1 1 2 0 2 2 2 0 0 1 2 0 0 5 2 3 0 1 1 0 25 2 2740.3304 Q12873;E9PG89;Q12873-2 Q12873 703 727 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 4 0.03044 30.352 By matching By matching By MS/MS By matching By matching By matching 1 1 1 10284000 0 2882200 2376700 0 0 5024900 3764 430 3806 16818;16819;16820 11170 11170 1 KELSPAGSISK AKKLKRMKKELSPAGS SPAGSISKNSPATLFE K K E S K N 1 0 0 0 0 0 1 1 0 1 1 2 0 0 1 3 0 0 0 0 0 11 1 1115.6186 O95453-2;O95453-3;O95453;B4DSB0 O95453-2 555 565 PARN Poly(A)-specific ribonuclease PARN yes no 2 1.0037E-07 112.02 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 7372000 651110 1542900 3268200 0 530090 1379700 3765 772 3807 16821;16822;16823;16824;16825 11171;11172;11173;11174 11172 4 KENALVQMADGNQAQLAMSHLNGHK RVKILFNKKENALVQM MSHLNGHKLHGKPIRI K K E H K L 4 0 3 1 0 3 1 2 2 0 3 2 2 0 0 1 0 0 0 1 0 25 1 2704.3174 P26599;P26599-2;P26599-3;A6NLN1 P26599 374 398 PTBP1 Polypyrimidine tract-binding protein 1 yes no 4 8.943E-09 62.082 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 2 81241000 0 13082000 59383000 0 0 8775900 3766 882 3808;3809 16826;16827;16828;16829 11175;11176;11177;11178 11178 96;97 4 KENDLNAEPNLKQTIK GGLVDMAKKENDLNAE PNLKQTIKATVENGKK K K E I K A 1 0 3 1 0 1 2 0 0 1 2 3 0 0 1 0 1 0 0 0 0 16 2 1853.9847 Q8NFC6 Q8NFC6 1412 1427 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 3;4 0.010477 64.04 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 2 1 1 2 14398000 1700600 4460600 2974800 1069200 1166700 3026200 3767 1325 3810 16830;16831;16832;16833;16834;16835;16836;16837;16838;16839 11179;11180;11181;11182 11180 3 KENTAAENGLTVR SYIINQAKKENTAAEN AENGLTVRLQTFLSKR K K E V R L 2 1 2 0 0 0 2 1 0 0 1 1 0 0 0 0 2 0 0 1 0 13 1 1401.7212 Q12789-3;Q12789;H3BU55 Q12789-3 1143 1155 GTF3C1 General transcription factor 3C polypeptide 1 yes no 3 0.00078797 88.282 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 10028000 308380 577730 1186900 366170 1505900 6083300 3768 1059 3811 16840;16841;16842;16843;16844;16845 11183;11184;11185 11183 3 KEPAASAAAFPSQR PAPDMTFKKEPAASAA AAAFPSQRTSWGFLQS K K E Q R T 5 1 0 0 0 1 1 0 0 0 0 1 0 1 2 2 0 0 0 0 0 14 1 1429.7314 A6NF48;Q9Y2X9 A6NF48 66 79 ZNF281 Zinc finger protein 281 yes no 3 0.0011422 64.842 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 7294100 1276800 0 1273300 918390 0 3825600 3769 19 3812 16846;16847;16848;16849 11186;11187 11186 2 KEPAITSQNSPEAR EKDLDEKKKEPAITSQ SQNSPEAREESTSSGN K K E A R E 2 1 1 0 0 1 2 0 0 1 0 1 0 0 2 2 1 0 0 0 0 14 1 1526.7689 P23193-2;P23193;E5RIS7 P23193-2 70 83 TCEA1 Transcription elongation factor A protein 1 yes no 3 0.0045324 52.008 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 4114700 787280 848130 0 1161300 0 1317900 3770 864 3813 16850;16851;16852;16853 11188;11189;11190 11190 3 KEPLYVGVDDDK DLARISLKKEPLYVGV YVGVDDDKANATVDGL K K E D K A 0 0 0 3 0 0 1 1 0 0 1 2 0 0 1 0 0 0 1 2 0 12 1 1376.6824 Q9NVP1;F5H863;H7C452 Q9NVP1 381 392 DDX18 ATP-dependent RNA helicase DDX18 yes no 2;3 0.0031118 74.537 By matching By MS/MS By matching By matching By MS/MS By matching 2 2 1 1 1 1 9291200 1827900 2496300 615420 524990 1724000 2102600 3771 1550 3814 16854;16855;16856;16857;16858;16859;16860;16861 11191;11192;11193 11192 3 KEPLYVGVDDDKANATVDGLEQGYVVCPSEK DLARISLKKEPLYVGV YVVCPSEKRFLLLFTF K K E E K R 2 0 1 4 1 1 3 3 0 0 2 3 0 0 2 1 1 0 2 5 0 31 2 3394.6239 Q9NVP1;F5H863 Q9NVP1 381 411 DDX18 ATP-dependent RNA helicase DDX18 yes no 4 1.1095E-07 50.234 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 220820000 0 0 0 24130000 0 196690000 3772 1550 3815 16862;16863 11194;11195 11194 2 KEPVDEDLYPEHYRK SSPVKRPRKEPVDEDL LYPEHYRKYSDYIKGS R K E R K Y 0 1 0 2 0 0 3 0 1 0 1 2 0 0 2 0 0 0 2 1 0 15 2 1916.9268 F5GX68 F5GX68 961 975 DNMT1 Cytosine-specific methyltransferase no no 4 0.00070356 76.358 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 9460200 0 1456100 800150 240330 1818800 5144700 3773 487 3816 16864;16865;16866;16867;16868 11196;11197;11198;11199 11197 4 KEQVETVPQATVK VVPKKKIKKEQVETVP TVPQATVKTGLQKGAS K K E V K T 1 0 0 0 0 2 2 0 0 0 0 2 0 0 1 0 2 0 0 3 0 13 1 1455.7933 Q9BZ95-4;C9JY66;Q9BZ95-2;B7ZL11;Q9BZ95;Q9BZ95-3 Q9BZ95-4 538 550 WHSC1L1 Histone-lysine N-methyltransferase NSD3 yes no 3 0.0014488 64.534 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 5270800 0 1204700 1179400 0 961380 1925300 3774 210 3817 16869;16870;16871;16872 11200;11201 11200 2 KEQVPSGAELER TSSQRRSKKEQVPSGA PSGAELERQQILQEMR K K E E R Q 1 1 0 0 0 1 3 1 0 0 1 1 0 0 1 1 0 0 0 1 0 12 1 1341.6888 E9PMS6;Q8WWI1-3;E9PMT2;Q8WWI1;E9PLH4;Q8WWI1-4;F8WD26;Q8WWI1-2 E9PMS6 1048 1059 LMO7 LIM domain only protein 7 yes no 3 0.035188 39.016 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1746700 0 672190 302060 0 0 772400 3775 460 3818 16873;16874;16875 11202 11202 1 KERAQLLVNPK REGGAKLKKERAQLLV AQLLVNPKKIIKKPEY K K E P K K 1 1 1 0 0 1 1 0 0 0 2 2 0 0 1 0 0 0 0 1 0 11 2 1294.7721 Q13416;C9JK08;B8ZZ80 Q13416 37 47 ORC2 Origin recognition complex subunit 2 yes no 3 0.016862 72.289 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 8389600 0 1259200 2790400 834530 1595500 1910000 3776 1081 3819 16876;16877;16878;16879;16880 11203 11203 1 KERGHTVTEPIQPLEPELPGEGQPEAR STKKKKKKKERGHTVT GEGQPEARATPGSTKK K K E A R A 1 2 0 0 0 2 6 3 1 1 2 1 0 0 5 0 2 0 0 1 0 27 2 2993.5207 O15446;O15446-2 O15446 428 454 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes no 4;5 3.1278E-29 91.202 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 143990000 23847000 0 31158000 34634000 9687500 44665000 3777 706 3820 16881;16882;16883;16884;16885;16886;16887;16888;16889;16890 11204;11205;11206;11207;11208;11209;11210;11211;11212 11207 7 KERSLSSGSNFCSEQK EENSLVKKKERSLSSG SNFCSEQKTSGIINKF K K E Q K T 0 1 1 0 1 1 2 1 0 0 1 2 0 1 0 5 0 0 0 0 0 16 2 1842.853 O95243-2 O95243-2 313 328 MBD4 Methyl-CpG-binding domain protein 4 no no 3 0.0062189 66.387 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 3745000 792920 557960 1716000 0 678070 0 3778 769 3821 16891;16892;16893;16894 11213;11214;11215 11215 3 KESEFDDEPKFMSK DKDKAKGRKESEFDDE DEPKFMSKVIGANKNQ R K E S K V 0 0 0 2 0 0 3 0 0 0 0 3 1 2 1 2 0 0 0 0 0 14 2 1715.7713 Q9Y2W1 Q9Y2W1 442 455 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.0011637 88.092 By MS/MS By matching By matching By matching By matching By matching 1 1 5063900 3878700 0 1185200 0 0 0 3779 1639 3822 16895;16896 11216 11216 1 KESFAPGTMYKPFGK SIEECMSKKESFAPGT TMYKPFGKEAAGTMTL K K E G K E 1 0 0 0 0 0 1 2 0 0 0 3 1 2 2 1 1 0 1 0 0 15 2 1686.844 Q96IZ5-2;Q96IZ5;H0Y6F9;H7BY88;Q96IZ5-3 Q96IZ5-2 47 61 RBM41 RNA-binding protein 41 yes no 3 0.0018242 73.415 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1405900 1405900 0 0 0 0 0 3780 1398 3823 16897;16898 11217;11218 11218 2 KESLGHWSQGLK KGKDAPIKKESLGHWS GHWSQGLKISMQDPKM K K E L K I 0 0 0 0 0 1 1 2 1 0 2 2 0 0 0 2 0 1 0 0 0 12 1 1368.715 C9JZ40;Q7Z2E3-4;Q7Z2E3-5;Q7Z2E3-9;Q7Z2E3-10;Q7Z2E3-11;Q7Z2E3-7;Q7Z2E3;C9J8U3;Q6JV81 C9JZ40 121 132 APTX Aprataxin yes no 3 0.00094367 82.505 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 1 1 34365000 7618900 830660 9344200 9387700 2854400 4329300 3781 274 3824 16899;16900;16901;16902;16903;16904;16905;16906 11219;11220;11221;11222;11223;11224;11225;11226 11223 8 KESYSVYVYK GKKRKRSRKESYSVYV SYSVYVYKVLKQVHPD R K E Y K V 0 0 0 0 0 0 1 0 0 0 0 2 0 0 0 2 0 0 3 2 0 10 1 1264.634 Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q5QNW6-2;B4DR52;Q99880;P57053 Q99879 35 44 HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B;Histone H2B type 1-L;Histone H2B type F-S yes no 2 0.00032825 107.11 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 6332100 864170 1653300 0 543860 1508100 1762700 3782 119 3825 16907;16908;16909;16910;16911 11227 11227 1 KETDVFWK DSLAKTIKKETDVFWK KETDVFWKSLDFKEQV K K E W K S 0 0 0 1 0 0 1 0 0 0 0 2 0 1 0 0 1 1 0 1 0 8 1 1051.5338 P35251-2;P35251 P35251-2 544 551 RFC1 Replication factor C subunit 1 yes no 2 2.5376E-08 120.31 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 1 1 1 15583000 0 2713900 1945900 1538600 3885500 5499000 3783 896 3826 16912;16913;16914;16915;16916;16917 11228;11229 11229 2 KETEGTVTCTGAEGR NMMRMGPKKETEGTVT TCTGAEGRSDNFVICS K K E G R S 1 1 0 0 1 0 3 3 0 0 0 1 0 0 0 0 4 0 0 1 0 15 1 1594.7257 Q8NFC6 Q8NFC6 1721 1735 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 3 0.00027738 83.292 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 3186500 452750 0 1139700 217100 401110 975870 3784 1325 3827 16918;16919;16920;16921;16922 11230;11231 11231 2 KETELLGSFSK CNVESNRKKETELLGS ELLGSFSKNESVPEVE K K E S K N 0 0 0 0 0 0 2 1 0 0 2 2 0 1 0 2 1 0 0 0 0 11 1 1237.6554 Q9NSV4-6;A8MYX0;Q9NSV4-5;C9JL55;Q9NSV4-4;C9JDG1;Q9NSV4;C9JDG0 Q9NSV4-6 1096 1106 DIAPH3 Protein diaphanous homolog 3 yes no 3 0.0029183 71.268 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2723600 0 816770 478820 0 0 1428000 3785 54 3828 16923;16924;16925 11232 11232 1 KETTFFLKEK NREGNTQKKETTFFLK TTFFLKEKQYQNRMSL K K E E K Q 0 0 0 0 0 0 2 0 0 0 1 3 0 2 0 0 2 0 0 0 0 10 2 1269.6969 Q96QE3;Q96QE3-2 Q96QE3 503 512 ATAD5 ATPase family AAA domain-containing protein 5 yes no 3 0.033832 72.289 By matching By MS/MS By matching By matching By matching By matching 1 1 2335700 0 1870200 0 0 465530 0 3786 1415 3829 16926;16927 11233 11233 1 KETVETAQDDETSSQGK TDSLVQEKKETVETAQ DETSSQGKAENIMASL K K E G K A 1 0 0 2 0 2 3 1 0 0 0 2 0 0 0 2 3 0 0 1 0 17 1 1851.8334 Q5JSL3;A6NIW2 Q5JSL3 283 299 DOCK11 Dedicator of cytokinesis protein 11 yes no 3 0.00091942 57.525 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1558600 0 316970 702330 0 74987 464350 3787 24 3830 16928;16929;16930;16931 11234 11234 1 KEVDATSPAPSTSSTVK PALSRKRKKEVDATSP PSTSSTVKTEGAEATP K K E V K T 2 0 0 1 0 0 1 0 0 0 0 2 0 0 2 4 3 0 0 2 0 17 1 1703.8578 Q16666-3;Q16666-2;Q16666;H3BLV7;E7EPR3;H3BM18 Q16666-3 100 116 IFI16 Gamma-interferon-inducible protein 16 yes no 3 0.0005629 73.498 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 27610000 3431700 2620000 1996000 4291900 9936900 5333400 3788 1155 3831 16932;16933;16934;16935;16936;16937 11235;11236;11237;11238;11239 11235 5 KEVDATSPAPSTSSTVKTEGAEATPGAQK PALSRKRKKEVDATSP EATPGAQKRKKSTKEK K K E Q K R 5 0 0 1 0 1 3 2 0 0 0 3 0 0 3 4 5 0 0 2 0 29 2 2844.3989 Q16666-3;Q16666-2;Q16666;H3BM18 Q16666-3 100 128 IFI16 Gamma-interferon-inducible protein 16 yes no 4 0.00038048 40.208 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 5485700 2805000 0 0 1635800 1044900 0 3789 1155 3832 16938;16939;16940 11240;11241;11242;11243 11242 4 KEVHLGACGALK VGLLDHPKKEVHLGAC LGACGALKNISFGRDQ K K E L K N 2 0 0 0 1 0 1 2 1 0 2 2 0 0 0 0 0 0 0 1 0 12 1 1281.6863 O60716-32;O60716-31;O60716-29;O60716-27;O60716-30;O60716-28;O60716-26;O60716-25;O60716-24;O60716-23;O60716-21;O60716-19;O60716-22;O60716-20;O60716-16;O60716-18;O60716-15;O60716-17;O60716-13;O60716-11;O60716-14;O60716-12;O60716-10;O60716-8;O60716-9;E9PIE5;O60716-7;O60716-5;C9JZR2;O60716-3;O60716-6;F8WA43;O60716-4;O60716-2;O60716;E9PKY0 O60716-32 99 110 CTNND1 Catenin delta-1 yes no 3 6.9552E-05 97.779 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3866700 0 0 649670 0 432800 2784200 3790 275 3833 16941;16942;16943 11244 11244 1 KEVMLQNGETPK EKKEEEEKKEVMLQNG LQNGETPKDLNDEKQK K K E P K D 0 0 1 0 0 1 2 1 0 0 1 2 1 0 1 0 1 0 0 1 0 12 1 1372.7021 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1644 1655 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2;3 1.3096E-254 184.96 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 2 1 1 2 55546000 681770 11089000 15604000 688380 896650 26587000 3791 486 3834 16944;16945;16946;16947;16948;16949;16950;16951;16952 11245;11246;11247;11248;11249 11247 5 KEVMLQNGETPKDLNDEK EKKEEEEKKEVMLQNG PKDLNDEKQKKNIKQR K K E E K Q 0 0 2 2 0 1 3 1 0 0 2 3 1 0 1 0 1 0 0 1 0 18 2 2087.0205 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1644 1661 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.005022 60.949 By matching By matching By matching By matching By matching By MS/MS 1 1 1955900 0 0 1174700 0 0 781180 3792 486 3835 16953;16954 11250 11250 1 KEVNEGIQALSNSEEEK VIAKREVKKEVNEGIQ LSNSEEEKKGVAASLL K K E E K K 1 0 2 0 0 1 5 1 0 1 1 2 0 0 0 2 0 0 0 1 0 17 1 1902.9171 Q8N3X1;Q8N3X1-2 Q8N3X1 302 318 FNBP4 Formin-binding protein 4 yes no 3 0.00044722 70.335 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 23719000 3935600 2915000 4471500 2719000 4587600 5090900 3793 1298 3836 16955;16956;16957;16958;16959;16960 11251;11252;11253;11254;11255 11252 4 KEVVAEVVKAPQVVAEAAK VDYSESAKKEVVAEVV QVVAEAAKTAKRKRES K K E A K T 5 0 0 0 0 1 3 0 0 0 0 3 0 0 1 0 0 0 0 6 0 19 2 1964.1306 O60832 O60832 425 443 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 3;4 7.8353E-145 142.88 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 346170000 74786000 83933000 33483000 114190000 13184000 26593000 3794 733 3837 16961;16962;16963;16964;16965;16966;16967;16968;16969;16970;16971;16972 11256;11257;11258;11259;11260;11261;11262;11263;11264;11265;11266;11267 11259 12 KEYNVNDDSMK RVKKNLLKKEYNVNDD NVNDDSMKLGGNNTSE K K E M K L 0 0 2 2 0 0 1 0 0 0 0 2 1 0 0 1 0 0 1 1 0 11 1 1341.5871 Q14527;Q14527-2;E7ESN4;F5H3D6 Q14527 330 340 HLTF Helicase-like transcription factor yes no 2 0.02352 75.416 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2220500 0 822840 769120 0 0 628580 3795 1107 3838 16973;16974;16975 11268 11268 1 KEYNVNDDSMKLGGNNTSEK RVKKNLLKKEYNVNDD GGNNTSEKADGLSKDA K K E E K A 0 0 4 2 0 0 2 2 0 0 1 3 1 0 0 2 1 0 1 1 0 20 2 2242.0172 Q14527;Q14527-2;E7ESN4;F5H3D6 Q14527 330 349 HLTF Helicase-like transcription factor yes no 4 0.0071578 42.529 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1866300 168050 0 1274600 423680 0 0 3796 1107 3839 16976;16977;16978 11269 11269 1 KFACPECPK KRTHTGEKKFACPECP FACPECPKRFMRSDHL K K F P K R 1 0 0 0 2 0 1 0 0 0 0 2 0 1 2 0 0 0 0 0 0 9 1 1135.5154 P08047;G5E9M8 P08047 685 693 SP1 Transcription factor Sp1 yes no 2 0.00038629 112.71 By MS/MS By matching By matching By matching By matching By matching 1 9661500 9661500 0 0 0 0 0 3797 804 3840 16979 11270 11270 1 KFAEALGSTEAK MVDQLFCKKFAEALGS ALGSTEAKAVPYQKFE K K F A K A 3 0 0 0 0 0 2 1 0 0 1 2 0 1 0 1 1 0 0 0 0 12 1 1250.6507 P78347-2;P78347-4;P78347-3;B4DH52;P78347 P78347-2 436 447 GTF2I General transcription factor II-I yes no 2;3 0.00073236 91.202 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 3 2 36423000 5148300 7215700 4356300 3837100 6846800 9018700 3798 90 3841 16980;16981;16982;16983;16984;16985;16986;16987;16988;16989;16990;16991;16992;16993 11271;11272;11273;11274;11275;11276;11277;11278;11279;11280 11276 9 KFEEIPIAHIK SSLRWAGKKFEEIPIA EIPIAHIKASHNNTQI K K F I K A 1 0 0 0 0 0 2 0 1 3 0 2 0 1 1 0 0 0 0 0 0 11 1 1323.7551 P82912-2;P82912;H0YL99 P82912-2 78 88 MRPS11 28S ribosomal protein S11, mitochondrial yes no 3 0.031693 42.843 By matching By matching By matching By MS/MS By matching By matching 1 1 1 5040900 0 2949900 0 1716100 0 374930 3799 1015 3842 16994;16995;16996 11281 11281 1 KFFVEESAEK HIRVHSAKKFFVEESA FVEESAEKQAKARESG K K F E K Q 1 0 0 0 0 0 3 0 0 0 0 2 0 2 0 1 0 0 0 1 0 10 1 1212.6027 Q13127;A0PJ83;Q13127-4;F8WAN5;Q13127-3;Q13127-2 Q13127 185 194 REST RE1-silencing transcription factor yes no 3 0.040645 64.374 By matching By matching By MS/MS By matching By matching By matching 1 0 0 0 0 0 0 0 3800 1072 3843 16997 11282 11282 1 KFGDPVVQSDMK DAKRLIGRKFGDPVVQ PVVQSDMKHWPFQVIN R K F M K H 0 0 0 2 0 1 0 1 0 0 0 2 1 1 1 1 0 0 0 2 0 12 1 1349.6649 P08107;H0YG33 P08107 77 88 HSPA1A Heat shock 70 kDa protein 1A/1B yes no 3 0.00092959 78.964 By matching By matching By matching By matching By MS/MS By matching 1 1 1771800 0 0 0 0 565620 1206200 3801 619 3844 16998;16999 11283 11283 1 KFIDQVVEK VTIPEDQKKFIDQVVE FIDQVVEKIEDLLQSE K K F E K I 0 0 0 1 0 1 1 0 0 1 0 2 0 1 0 0 0 0 0 2 0 9 1 1104.6179 O95453-2;O95453-3;O95453;F5H1Z4;H3BRK1 O95453-2 118 126 PARN Poly(A)-specific ribonuclease PARN yes no 2 0.022068 105.13 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 8835100 0 2394600 1281900 664820 1268300 3225500 3802 772 3845 17000;17001;17002;17003;17004 11284;11285 11285 2 KFNQVLGDDEK GKAQDFVKKFNQVLGD QVLGDDEKLRSQLELL K K F E K L 0 0 1 2 0 1 1 1 0 0 1 2 0 1 0 0 0 0 0 1 0 11 1 1291.6408 Q29RF7;Q29RF7-3 Q29RF7 558 568 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 2 0.0057683 92.781 By matching By matching By matching By matching By matching By MS/MS 1 1 1397000 0 0 172670 0 0 1224300 3803 1159 3846 17005;17006 11286 11286 1 KFNSLPQYSPVTFDRK KLDEEFEKKFNSLPQY SPVTFDRKCVPVPRKK K K F R K C 0 1 1 1 0 1 0 0 0 0 1 2 0 2 2 2 1 0 1 1 0 16 2 1925.9999 C9JA69;Q8WY36-2;Q8WY36 C9JA69 696 711 BBX HMG box transcription factor BBX yes no 3;4 1.262E-64 130.64 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 2 1 1 231970000 11037000 36202000 46655000 20822000 6505800 110750000 3804 238 3847 17007;17008;17009;17010;17011;17012;17013;17014 11287;11288;11289;11290;11291;11292;11293 11291 7 KFPVFKAVSFK QLEEKENKKFPVFKAV VFKAVSFKSQVVAGTN K K F F K S 1 0 0 0 0 0 0 0 0 0 0 3 0 3 1 1 0 0 0 2 0 11 2 1296.7594 P04080 P04080 34 44 CSTB Cystatin-B yes yes 3 1.4784E-09 111.5 By matching By matching By matching By MS/MS By matching By matching 1 0 0 0 0 0 0 0 3805 786 3848 17015 11294 11294 1 KFQSFQDHKLK QCEINYVKKFQSFQDH SFQDHKLKISKEDSKI K K F L K I 0 0 0 1 0 2 0 0 1 0 1 3 0 2 0 1 0 0 0 0 0 11 2 1404.7514 Q14331;E9PLY7;Q9BZ01 Q14331 212 222 FRG1;FRG1B Protein FRG1;Protein FRG1B yes no 3 3.4267E-41 132.25 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 53120000 1338800 6172100 13842000 5117600 12266000 14383000 3806 1106 3849 17016;17017;17018;17019;17020;17021;17022 11295;11296;11297;11298;11299;11300;11301;11302 11298 8 KFRQCPEPTSTAEK TPAIVPPKKFRQCPEP EPTSTAEKLGLKKGPR K K F E K L 1 1 0 0 1 1 2 0 0 0 0 2 0 1 2 1 2 0 0 0 0 14 2 1677.8145 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 1273 1286 SETX Probable helicase senataxin yes no 4 0.013996 47.037 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2538000 0 0 1325000 371170 0 841850 3807 1250 3850 17023;17024;17025 11303 11303 1 KFSCEICEK IVHGYAEKKFSCEICE FSCEICEKKFYTMAHV K K F E K K 0 0 0 0 2 0 2 0 0 1 0 2 0 1 0 1 0 0 0 0 0 9 1 1199.5315 Q9Y2D9;D6RDG5;Q9UFB7;D6RF85;F5H6L2;H7BXD3 Q9Y2D9 328 336 ZNF652;ZBTB47 Zinc finger protein 652;Zinc finger and BTB domain-containing protein 47 yes no 3 0.0081924 74.841 By matching By matching By MS/MS By matching By matching By matching 1 543730 0 0 543730 0 0 0 3808 1631 3851 17026 11304 11304 1 KFSCPICEK YRTHTGEKKFSCPICE FSCPICEKRFMRSDHL K K F E K R 0 0 0 0 2 0 1 0 0 1 0 2 0 1 1 1 0 0 0 0 0 9 1 1167.5417 Q9Y2Y9;H0YK05 Q9Y2Y9 226 234 KLF13 Krueppel-like factor 13 yes no 2 0.019979 105.4 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 4636100 643390 1599600 1738900 0 654240 0 3809 1641 3852 17027;17028;17029;17030 11305 11305 1 KFTTDDSICVLGISK KEARGRGKKFTTDDSI ICVLGISKRNVIFQPV K K F S K R 0 0 0 2 1 0 0 1 0 2 1 2 0 1 0 2 2 0 0 1 0 15 1 1682.8549 Q01813;H0Y3P8;Q5VSR7;B1APP8;H0Y757 Q01813 710 724 PFKP 6-phosphofructokinase type C yes no 3 0.012887 40.983 By matching By MS/MS By matching By matching By matching By matching 1 13050000 0 13050000 0 0 0 0 3810 1031 3853 17031 11306 11306 1 KGAECFEELSK SNKSKKSKKGAECFEE ECFEELSKCMQEKSSP K K G S K C 1 0 0 0 1 0 3 1 0 0 1 2 0 1 0 1 0 0 0 0 0 11 1 1296.602 P23769;P23769-2 P23769 409 419 GATA2 Endothelial transcription factor GATA-2 yes no 2;3 5.3933E-29 127.02 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 3 2 2 2 1 20462000 3445000 4940800 4413000 0 2085200 5578400 3811 869 3854 17032;17033;17034;17035;17036;17037;17038;17039;17040;17041 11307;11308;11309;11310;11311;11312;11313;11314 11308 8 KGAVAEDGDELRTEPEAK ________________ LRTEPEAKKSKTAAKK K K G A K K 3 1 0 2 0 0 4 2 0 0 1 2 0 0 1 0 1 0 0 1 0 18 2 1913.933 G3V3C7;G3V5Q1;G3V3M6;P27695;G3V5D9 G3V3C7 7 24 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 3;4 3.2087E-58 122.75 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 1 1 16635000 6018900 2249000 2176000 3781300 1232100 1177700 3812 584 3855 17042;17043;17044;17045;17046;17047;17048;17049;17050;17051;17052 11315;11316;11317;11318;11319;11320;11321 11320 7 KGAVEDVISRNEIQGR PTVINNLKKGAVEDVI SRNEIQGRSAEEAYKQ K K G G R S 1 2 1 1 0 1 2 2 0 2 0 1 0 0 0 1 0 0 0 2 0 16 2 1769.9384 O15226;G3V1N1 O15226 524 539 NKRF NF-kappa-B-repressing factor yes no 3 0.0084131 65.956 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 17289000 5320600 0 0 337750 5893500 5736700 3813 578 3856 17053;17054;17055;17056 11322;11323 11322 2 KGDECELLGHSK TLERGILKKGDECELL CELLGHSKNIRTVVTG K K G S K N 0 0 0 1 1 0 2 2 1 0 2 2 0 0 0 1 0 0 0 0 0 12 1 1371.6453 P49411 P49411 286 297 TUFM Elongation factor Tu, mitochondrial yes yes 3 0.0010013 86.803 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 2716800 513060 437790 607210 442770 351640 364350 3814 935 3857 17057;17058;17059;17060;17061;17062 11324;11325 11325 2 KGEAMQKLPGTSHGGSK LRIEILNKKGEAMQKL GTSHGGSKKLLVELKV K K G S K K 1 0 0 0 0 1 1 4 1 0 1 3 1 0 1 2 1 0 0 0 0 17 2 1711.8676 A6NHR9;A6NHR9-2 A6NHR9 726 742 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes no 3 0.0082437 67.648 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 3209500 0 417480 1501900 450940 0 839130 3815 23 3858 17063;17064;17065;17066 11326 11326 1 KGEFETGFEK AVLVISARKGEFETGF EFETGFEKGGQTREHA R K G E K G 0 0 0 0 0 0 3 2 0 0 0 2 0 2 0 0 1 0 0 0 0 10 1 1170.5557 H3BR35;P15170;P15170-2;F5GWG9;Q8IYD1 H3BR35 193 202 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 2 0.014251 95.094 By matching By MS/MS By matching By matching By matching By matching 1 1 1 7246500 0 2370000 1662900 0 3213600 0 3816 642 3859 17067;17068;17069 11327 11327 1 KGETPTVDGTWKTPSFPK KLHSEPSKKGETPTVD WKTPSFPKKKTAASSN K K G P K K 0 0 0 1 0 0 1 2 0 0 0 3 0 1 3 1 4 1 0 1 0 18 2 1975.0051 Q9H9L3 Q9H9L3 61 78 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 yes yes 3;4 3.2391E-155 150.9 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 2 1 39829000 0 11591000 0 14015000 0 14224000 3817 1509 3860 17070;17071;17072;17073 11328;11329;11330;11331 11330 4 KGFGEPVLPRPPSLIQNECGQGEQASEK AQRQLLNKKGFGEPVL QGEQASEKNECISEDM K K G E K N 1 1 1 0 1 3 4 4 0 1 2 2 0 1 4 2 0 0 0 1 0 28 2 3051.5084 Q96RL1;F8VQY2;Q96RL1-3;F2Z2T8 Q96RL1 318 345 UIMC1 BRCA1-A complex subunit RAP80 yes no 4 9.611E-18 67.368 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 21414000 0 12842000 8571600 0 0 0 3818 535 3861 17074;17075 11332;11333 11332 2 KGFLPETK PISKKRKKKGFLPETK KGFLPETKKRKKRKSE K K G T K K 0 0 0 0 0 0 1 1 0 0 1 2 0 1 1 0 1 0 0 0 0 8 1 918.51747 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 1092 1099 MYBBP1A Myb-binding protein 1A yes no 2 4.0517E-78 155.58 By matching By matching By matching By matching By MS/MS By matching 1 1 1 15085000 0 3469500 5434700 0 6180900 0 3819 682 3862 17076;17077;17078 11334 11334 1 KGGFVPYRDSK ISALGDDKKGGFVPYR FVPYRDSKLTRLLQDS K K G S K L 0 1 0 1 0 0 0 2 0 0 0 2 0 1 1 1 0 0 1 1 0 11 2 1252.6564 O95239;O95239-2 O95239 282 292 KIF4A Chromosome-associated kinesin KIF4A yes no 3 0.0031133 93.442 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 7322500 0 2405900 3255300 714170 947160 0 3820 768 3863 17079;17080;17081;17082 11335;11336 11335 2 KGGPSPGDVEAIK AGLPTDKKKGGPSPGD PGDVEAIKNAIANAST K K G I K N 1 0 0 1 0 0 1 3 0 1 0 2 0 0 2 1 0 0 0 1 0 13 1 1253.6616 P09661;H0YLR3;H0YMA0 P09661 193 205 SNRPA1 U2 small nuclear ribonucleoprotein A yes no 2;3 1.0325E-08 104.9 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 4 3 2 2 4 2 83112000 9949600 22009000 3817400 1848500 18007000 27481000 3821 814 3864 17083;17084;17085;17086;17087;17088;17089;17090;17091;17092;17093;17094;17095;17096;17097;17098;17099 11337;11338;11339;11340;11341;11342;11343;11344 11341 8 KGGSWIQEINVAEK NFEQKMLKKGGSWIQE QEINVAEKNWYPRQKI K K G E K N 1 0 1 0 0 1 2 2 0 2 0 2 0 0 0 1 0 1 0 1 0 14 1 1557.8151 P78527;E7EUY0;P78527-2 P78527 4023 4036 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2;3 1.1122E-170 163.34 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2 1 340010000 70607000 55116000 115800000 12727000 0 85756000 3822 1012 3865 17100;17101;17102;17103;17104;17105;17106;17107 11345;11346;11347;11348;11349;11350;11351;11352 11351 8 KGGVSCGTSFRGTVGR KDGLNQAKKGGVSCGT SFRGTVGRTRDYTVLH K K G G R T 0 2 0 0 1 0 0 5 0 0 0 1 0 1 0 2 2 0 0 2 0 16 2 1624.8104 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 339 354 WAPAL Wings apart-like protein homolog yes no 4 0.011618 43.69 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 9660200 528830 1261800 1006200 1239000 1613400 4010800 3823 1253 3866 17108;17109;17110;17111;17112;17113 11353;11354 11353 2 KGIHYWEVELQK VLGLHCYKKGIHYWEV YWEVELQKNNFCGVGI K K G Q K N 0 0 0 0 0 1 2 1 1 1 1 2 0 0 0 0 0 1 1 1 0 12 1 1528.8038 Q14258 Q14258 509 520 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 3 0.00010493 96.067 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 6152800 0 0 0 399720 1948400 3804700 3824 1105 3867 17114;17115;17116 11355;11356 11355 2 KGLEPSQSTAAKVPK KKKKNKGKKGLEPSQS STAAKVPKKAKTWIPE K K G P K K 2 0 0 0 0 1 1 1 0 0 1 3 0 0 2 2 1 0 0 1 0 15 2 1539.8621 G3V529;Q9GZR7;F5H4J5 G3V529 118 132 DDX24 ATP-dependent RNA helicase DDX24 yes no 3 6.608E-42 120.21 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 183300000 29260000 19258000 24594000 20013000 63285000 26886000 3825 588 3868 17117;17118;17119;17120;17121;17122 11357;11358;11359;11360;11361 11357 5 KGMFASTHLILK FVRKSNAKKGMFASTH ASTHLILKERGGSKYE K K G L K E 1 0 0 0 0 0 0 1 1 1 2 2 1 1 0 1 1 0 0 0 0 12 1 1344.7588 Q92547 Q92547 687 698 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 3 0.036834 38.58 By matching By matching By matching By matching By matching By MS/MS 1 1323700 0 0 0 0 0 1323700 3826 1351 3869 17123 11362 11362 1 KGNFILSAGVDK IFALKWNKKGNFILSA ILSAGVDKTTIIWDAH K K G D K T 1 0 1 1 0 0 0 2 0 1 1 2 0 1 0 1 0 0 0 1 0 12 1 1247.6874 B7Z475;Q9BZK7 B7Z475 139 150 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes no 3 0.0064437 56.956 By matching By matching By matching By matching By matching By MS/MS 1 1 1543500 0 0 0 0 302280 1241200 3827 185 3870 17124;17125 11363 11363 1 KGNIILAVSDHISK SVKENFDKKGNIILAV AVSDHISKVLYLYQGE K K G S K V 1 0 1 1 0 0 0 1 1 3 1 2 0 0 0 2 0 0 0 1 0 14 1 1493.8566 F2Z2E1;Q96EK7;F5GZX9;F5GY05;Q96EK7-2 F2Z2E1 260 273 FAM120B Constitutive coactivator of peroxisome proliferator-activated receptor gamma yes no 3 0.0098799 45.614 By matching By matching By MS/MS By matching By matching By matching 1 3070200 0 0 3070200 0 0 0 3828 474 3871 17126 11364 11364 1 KGNMDEAHIDQVR DLEVVLEKKGNMDEAH EAHIDQVRRKALQEEI K K G V R R 1 1 1 2 0 1 1 1 1 1 0 1 1 0 0 0 0 0 0 1 0 13 1 1511.7151 Q1ED39 Q1ED39 319 331 KNOP1 Lysine-rich nucleolar protein 1 yes yes 3 1.5217E-05 96.464 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 14419000 1619500 1359100 1932700 775760 3874700 4857400 3829 1157 3872 17127;17128;17129;17130;17131;17132 11365;11366;11367 11366 3 KGPQSLFNAPR GAVQTAGKKGPQSLFN QSLFNAPRGKKRPAPG K K G P R G 1 1 1 0 0 1 0 1 0 0 1 1 0 1 2 1 0 0 0 0 0 11 1 1213.6568 P46087;Q3KQS4;P46087-2;Q05BA7;F5GWB7;F5H709;F5H5X6 P46087 92 102 NOP2 Putative ribosomal RNA methyltransferase NOP2 yes no 3 0.0048796 65.627 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2838000 0 1788600 0 0 0 1049400 3830 923 3873 17133;17134 11368;11369 11368 2 KGQEADLEAGGEEVPEANGSAGK NQKPKKRKKGQEADLE EANGSAGKRSKKKKQR K K G G K R 4 0 1 1 0 1 5 5 0 0 1 2 0 0 1 1 0 0 0 1 0 23 1 2242.0349 Q9NX58 Q9NX58 225 247 LYAR Cell growth-regulating nucleolar protein yes yes 3 4.6826E-21 91.091 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 15141000 3432500 2050500 767980 666850 6194000 2028900 3831 1559 3874 17135;17136;17137;17138;17139;17140 11370;11371;11372;11373 11370 4 KGQWDCSVCCVQNESSSLK GFEGMFIRKGQWDCSV QNESSSLKCVACDASK R K G L K C 0 0 1 1 3 2 1 1 0 0 1 2 0 0 0 4 0 1 0 2 0 19 1 2270.9718 P49792 P49792 1782 1800 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 3 0.00030281 76.118 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 10178000 0 1821400 5167100 0 0 3189700 3832 945 3875 17141;17142;17143 11374;11375 11375 2 KGRPDPYAYIPLNR KAKGDVKKKGRPDPYA YAYIPLNRSKLNRRKK K K G N R S 1 2 1 1 0 0 0 1 0 1 1 1 0 0 3 0 0 0 2 0 0 14 2 1658.8893 Q5JTH9-2;E9PCK7;Q5JTH9;F5H456 Q5JTH9-2 1145 1158 RRP12 RRP12-like protein yes no 3;4 0.00010689 93.228 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 71301000 15756000 0 12417000 1794100 4707400 36626000 3833 414 3876 17144;17145;17146;17147;17148;17149 11376;11377;11378;11379;11380 11378 5 KGSQDSGAPGEAMER GPGQDRGKKGSQDSGA APGEAMERLGRAQRCD K K G E R L 2 1 0 1 0 1 2 3 0 0 0 1 1 0 1 2 0 0 0 0 0 15 1 1518.6733 Q9H1J1-3;Q9H1J1-2;Q9H1J1 Q9H1J1-3 74 88 UPF3A Regulator of nonsense transcripts 3A yes no 3 0.0041907 48.899 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2209400 0 579790 968770 0 0 660840 3834 1484 3877 17150;17151;17152 11381;11382 11382 2 KGSQTNLKDPVGVYCR TPRKPTVKKGSQTNLK DPVGVYCRVRPLGFPD K K G C R V 0 1 1 1 1 1 0 2 0 0 1 2 0 0 1 1 1 0 1 2 0 16 2 1820.9203 Q02241-2;H7BYN4;Q02241;H0YME6;H0YMJ4 Q02241-2 16 31 KIF23 Kinesin-like protein KIF23 yes no 3;4 0.0030631 64.374 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 2 2 1 2 10130000 882460 2478000 0 1421500 1145800 4202400 3835 660 3878 17153;17154;17155;17156;17157;17158;17159;17160 11383;11384;11385 11384 3 KGTENGVNGTLTSNVADSPRNK VTKGRSSKKGTENGVN VADSPRNKKEKSS___ K K G N K K 1 1 4 1 0 0 1 3 0 0 1 2 0 0 1 2 3 0 0 2 0 22 2 2258.1251 G3XAN4;B4E0K2;Q15629 G3XAN4 262 283 TRAM1 Translocating chain-associated membrane protein 1 yes no 4 3.6687E-06 69.259 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 7141500 1111800 1756100 0 1727300 1386000 1160300 3836 153 3879 17161;17162;17163;17164;17165 11386;11387;11388;11389 11387 4 KGTGIAAQTAGIAAAAR TEGFRNAKKGTGIAAQ AGIAAAARAKQKGVIH K K G A R A 7 1 0 0 0 1 0 3 0 2 0 1 0 0 0 0 2 0 0 0 0 17 1 1526.8529 P82912-2;P82912;P82912-3 P82912-2 121 137 MRPS11 28S ribosomal protein S11, mitochondrial yes no 3 1.4058E-35 110.04 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 21294000 0 3170800 6360400 0 0 11763000 3837 1015 3880 17166;17167;17168;17169 11390;11391;11392;11393;11394 11390 4 KGTVEGFEPADNK GRTKPIPKKGTVEGFE GFEPADNKCLLRATDG K K G N K C 1 0 1 1 0 0 2 2 0 0 0 2 0 1 1 0 1 0 0 1 0 13 1 1390.6729 P37108;H0YLA2 P37108 43 55 SRP14 Signal recognition particle 14 kDa protein yes no 2;3 6.622E-47 127.78 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 2 2 3 3 3 440770000 91441000 37713000 125940000 59556000 37848000 88277000 3838 903 3881 17170;17171;17172;17173;17174;17175;17176;17177;17178;17179;17180;17181;17182;17183;17184;17185;17186;17187 11395;11396;11397;11398;11399;11400;11401;11402;11403;11404;11405 11403 11 KGTVEGFEPADNKCLLR GRTKPIPKKGTVEGFE ADNKCLLRATDGKKKI K K G L R A 1 1 1 1 1 0 2 2 0 0 2 2 0 1 1 0 1 0 0 1 0 17 2 1932.9727 P37108;H0YLA2 P37108 43 59 SRP14 Signal recognition particle 14 kDa protein yes no 3;4 0.0018901 79.326 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 2 2 1 2 22005000 7629900 0 5893300 2796100 1690700 3994800 3839 903 3882 17188;17189;17190;17191;17192;17193;17194;17195;17196 11406;11407;11408;11409;11410 11407 5 KGVLGKSPLSALAR QHQKALPKKGVLGKSP SPLSALARKKARLSLV K K G A R K 2 1 0 0 0 0 0 2 0 0 3 2 0 0 1 2 0 0 0 1 0 14 2 1395.8562 I3L1L3;Q9BQG0;Q9BQG0-2;I3L2H8 I3L1L3 1204 1217 MYBBP1A Myb-binding protein 1A yes no 3 8.2206E-08 100.11 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 18676000 0 1724300 7371800 0 2772800 6807400 3840 682 3883 17197;17198;17199;17200 11411;11412;11413 11411 3 KGVNLPGAAVDLPAVSEK NGGSLGSKKGVNLPGA DLPAVSEKDIQDLKFG K K G E K D 3 0 1 1 0 0 1 2 0 0 2 2 0 0 2 1 0 0 0 3 0 18 1 1763.9781 P14618;H3BQ34;E9PF79;H3BTN5;P14618-2;P14618-3;H3BSU3;Q504U3;E7EUJ4 P14618 207 224 PKM;PKM2 Pyruvate kinase PKM;Pyruvate kinase yes no 2;3 0.0023956 69.07 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 62683000 56054000 6629000 0 0 0 0 3841 837 3884 17201;17202 11414;11415 11415 2 KGVSQTGTPVCEEDGDAGLGIR GPGKLSPRKGVSQTGT GDAGLGIRQGGKAPVT R K G I R Q 1 1 0 2 1 1 2 5 0 1 1 1 0 0 1 1 2 0 0 2 0 22 1 2245.0645 Q12888;Q12888-2;F8VY86 Q12888 1365 1386 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.00043493 53.278 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 7779900 0 1965300 1800200 0 1596600 2417700 3842 1063 3885 17203;17204;17205;17206 11416;11417;11418;11419 11416 4 KGWLDQEDQEAPLQK QQNETKKKKGWLDQED DQEAPLQKGDAKIKAQ K K G Q K G 1 0 0 2 0 3 2 1 0 0 2 2 0 0 1 0 0 1 0 0 0 15 1 1783.8741 Q8IWC1-2;Q8IWC1;H7BY77;Q8IWC1-3 Q8IWC1-2 624 638 MAP7D3 MAP7 domain-containing protein 3 yes no 3 0.0056445 46.68 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2310300 0 1008500 0 0 0 1301800 3843 1280 3886 17207;17208 11420;11421 11420 2 KGWLDQEDQEAPLQKGDAK QQNETKKKKGWLDQED PLQKGDAKIKAQEEAD K K G A K I 2 0 0 3 0 3 2 2 0 0 2 3 0 0 1 0 0 1 0 0 0 19 2 2155.0546 Q8IWC1-2;Q8IWC1;H7BY77;Q8IWC1-3 Q8IWC1-2 624 642 MAP7D3 MAP7 domain-containing protein 3 yes no 4 0.0011971 56.25 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2822000 613630 468320 1740000 0 0 0 3844 1280 3887 17209;17210;17211 11422 11422 1 KHDADSFYQFSCNICGK ASLNWHMKKHDADSFY FSCNICGKKFEKKDSV K K H G K K 1 0 1 2 2 1 0 1 1 1 0 2 0 2 0 2 0 0 1 0 0 17 1 2075.8829 Q96JP5-2;H9KV86;Q96JP5;H3BTR0 Q96JP5-2 421 437 ZFP91;ZFP91-CNTF E3 ubiquitin-protein ligase ZFP91 yes no 3 0.0032853 46.162 By matching By matching By matching By MS/MS By matching By matching 1 1 4582900 0 2888400 0 1694500 0 0 3845 677 3888 17212;17213 11423 11423 1 KHFTILDAPGHK RAYFETEKKHFTILDA ILDAPGHKSFVPNMIG K K H H K S 1 0 0 1 0 0 0 1 2 1 1 2 0 1 1 0 1 0 0 0 0 12 1 1362.7408 H3BR35;P15170;P15170-2;F5GWG9;Q8IYD1;H3BSV8 H3BR35 158 169 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 3 0.0076096 55.105 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 4056600 597620 0 0 0 1559100 1899900 3846 642 3889 17214;17215;17216 11424;11425 11424 2 KHHLQPENPGPGGAAPSLEQNR KRRRKKKKKHHLQPEN APSLEQNRGREPEASG K K H N R G 2 1 2 0 0 2 2 3 2 0 2 1 0 0 4 1 0 0 0 0 0 22 1 2333.1625 Q14684-2;Q14684 Q14684-2 388 409 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 4 0.0047921 40.642 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 6021600 0 0 0 870520 2003900 3147200 3847 1111 3890 17217;17218;17219 11426;11427 11427 2 KHLSSLQLFYGK LTAHRAGKKHLSSLQL SLQLFYGKKQPGKERK K K H G K K 0 0 0 0 0 1 0 1 1 0 3 2 0 1 0 2 0 0 1 0 0 12 1 1419.7874 Q9BWG6-2;Q9BWG6 Q9BWG6-2 32 43 SCNM1 Sodium channel modifier 1 yes no 3 0.0018461 69.216 By matching By matching By MS/MS By matching By matching By matching 1 7506300 0 0 7506300 0 0 0 3848 1458 3891 17220 11428 11428 1 KHPCCVLSNPDQK FVLTVTGKKHPCCVLS VLSNPDQKGKIRRIDC K K H Q K G 0 0 1 1 2 1 0 0 1 0 1 2 0 0 2 1 0 0 0 1 0 13 1 1581.7392 O00712-2;Q5W0Y9;O00712;H7BYE8;Q5VW27;Q5VW29;Q5VW30;Q5VW26 O00712-2 100 112 NFIB Nuclear factor 1 B-type;Nuclear factor 1 yes no 3 0.0011552 67.519 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2352600 0 455110 0 385800 0 1511700 3849 658 3892 17221;17222;17223 11429 11429 1 KHPCCVLSNPDQKGK FVLTVTGKKHPCCVLS SNPDQKGKIRRIDCLR K K H G K I 0 0 1 1 2 1 0 1 1 0 1 3 0 0 2 1 0 0 0 1 0 15 2 1766.8556 O00712-2;Q5W0Y9;O00712;H7BYE8;Q5VW27;Q5VW29;Q5VW30;Q5VW26 O00712-2 100 114 NFIB Nuclear factor 1 B-type;Nuclear factor 1 yes no 3;4 1.3363E-86 137.81 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 2 2 28686000 3746900 3476900 4350300 2957000 4355900 9799400 3850 658 3893 17224;17225;17226;17227;17228;17229;17230;17231;17232 11430;11431;11432;11433;11434;11435;11436 11434 7 KHPDASVNFSEFSK TCREEHKKKHPDASVN VNFSEFSKKCSERWKT K K H S K K 1 0 1 1 0 0 1 0 1 0 0 2 0 2 1 3 0 0 0 1 0 14 1 1591.7631 Q5T7C4;Q5T7C6;P09429;Q5T7C0 Q5T7C4 30 43 HMGB1 High mobility group protein B1 yes no 3 3.2777E-20 108.36 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 25841000 3975800 2627100 3564000 4036600 6339100 5298800 3851 813 3894 17233;17234;17235;17236;17237;17238 11437;11438;11439;11440;11441;11442 11438 6 KHPDSSVNFAEFSK TCREEHKKKHPDSSVN VNFAEFSKKCSERWKT K K H S K K 1 0 1 1 0 0 1 0 1 0 0 2 0 2 1 3 0 0 0 1 0 14 1 1591.7631 D6R9A6;P26583 D6R9A6 30 43 HMGB2 High mobility group protein B2 yes no 3 0.0014558 62.081 By MS/MS By matching By matching By matching By matching By matching 1 1404600 1404600 0 0 0 0 0 3852 315 3895 17239 11443 11443 1 KHQVSVEGTNQTDVK GSAIIHIKKHQVSVEG GTNQTDVKAVGGPAKL K K H V K A 0 0 1 1 0 2 1 1 1 0 0 2 0 0 0 1 2 0 0 3 0 15 1 1668.8431 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7;Q14676-4 Q14676 540 554 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3 0.00097414 67.646 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 7035800 627740 1013500 1282700 507270 985980 2618600 3853 1109 3896 17240;17241;17242;17243;17244;17245 11444;11445;11446 11445 3 KHQVSVEGTNQTDVKAVGGPAK GSAIIHIKKHQVSVEG KAVGGPAKLLVVSLEE K K H A K L 2 0 1 1 0 2 1 3 1 0 0 3 0 0 1 1 2 0 0 4 0 22 2 2249.1764 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7;Q14676-4 Q14676 540 561 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 4 3.2418E-17 86.213 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 18702000 4815700 2299700 2722600 2103700 2628300 4132200 3854 1109 3897 17246;17247;17248;17249;17250;17251;17252 11447;11448;11449;11450;11451;11452;11453;11454 11454 6 KHYEDAQVPLTNHK RYVNGHAKKHYEDAQV QVPLTNHKKSEKQDKV K K H H K K 1 0 1 1 0 1 1 0 2 0 1 2 0 0 1 0 1 0 1 1 0 14 1 1678.8427 Q6JHV3;H0YMI4;Q9Y6I4;H0YL81;B4DV65;H0YMP6 Q6JHV3 37 50 USP3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 3;4 1.2814E-20 111.31 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 1 2 2 1 2 21227000 5070000 1442600 2661700 2166300 4069400 5816800 3855 628 3898 17253;17254;17255;17256;17257;17258;17259;17260;17261;17262;17263;17264 11455;11456;11457;11458;11459;11460;11461;11462;11463;11464 11456 9 KHYEDAQVPLTNHKK RYVNGHAKKHYEDAQV VPLTNHKKSEKQDKVQ K K H K K S 1 0 1 1 0 1 1 0 2 0 1 3 0 0 1 0 1 0 1 1 0 15 2 1806.9377 Q6JHV3;H0YMI4;Q9Y6I4;H0YL81;B4DV65;H0YMP6 Q6JHV3 37 51 USP3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 3;4 0.0006762 75.911 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 2 2 2 2 2 50903000 1264000 12724000 10144000 8192200 7286200 11293000 3856 628 3899 17265;17266;17267;17268;17269;17270;17271;17272;17273;17274;17275 11465;11466;11467;11468;11469 11467 5 KIDSAPLALLHK KTYLNPWKKIDSAPLA APLALLHKILVENPSA K K I H K I 2 0 0 1 0 0 0 0 1 1 3 2 0 0 1 1 0 0 0 0 0 12 1 1304.7816 O14757-2;F5H7S4;O14757;E7EPP6;E9PPA5 O14757-2 139 150 CHEK1 Serine/threonine-protein kinase Chk1 yes no 3 0.035188 39.016 By matching By MS/MS By matching By matching By matching By matching 1 991320 0 991320 0 0 0 0 3857 358 3900 17276 11470 11470 1 KIFGCSECEK PSGSGRGKKIFGCSEC FGCSECEKLFRSPRDL K K I E K L 0 0 0 0 2 0 2 1 0 1 0 2 0 1 0 1 0 0 0 0 0 10 1 1256.5529 Q96SL8 Q96SL8 412 421 FIZ1 Flt3-interacting zinc finger protein 1 yes yes 3 0.0054962 72.848 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 8461900 1053800 1300100 2592300 713250 1164500 1637900 3858 1419 3901 17277;17278;17279;17280;17281;17282 11471;11472;11473 11473 3 KIFVGGLNPEATEEK AMKKDPVKKIFVGGLN NPEATEEKIREYFGEF K K I E K I 1 0 1 0 0 0 3 2 0 1 1 2 0 1 1 0 1 0 0 1 0 15 1 1630.8566 D6R9P3;D6RD18;Q99729-3;D6RBZ0;Q99729-2 D6R9P3 155 169 HNRNPAB yes no 3 0.010557 42.388 By matching By MS/MS By matching By matching By matching By matching 1 1 1359700 0 733880 0 0 0 625830 3859 318 3902 17283;17284 11474 11474 1 KIGQQPQQPGAPPQQDYTK KAWEEYYKKIGQQPQQ PPQQDYTKAWEEYYKK K K I T K A 1 0 0 1 0 6 0 2 0 1 0 2 0 0 4 0 1 0 1 0 0 19 1 2108.0651 Q92945-2;Q92945 Q92945-2 628 646 KHSRP Far upstream element-binding protein 2 yes no 3 0.0002158 78.225 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 3 2 2 2 2 252330000 47714000 52194000 61436000 45911000 40263000 4811600 3860 1366 3903 17285;17286;17287;17288;17289;17290;17291;17292;17293;17294;17295;17296 11475;11476;11477;11478;11479;11480;11481;11482;11483;11484;11485 11483 11 KIGSTENISNTKEPSEK KLNRETGKKIGSTENI NTKEPSEKLESTSSKV K K I E K L 0 0 2 0 0 0 3 1 0 2 0 3 0 0 1 3 2 0 0 0 0 17 2 1860.9429 Q7Z6E9;Q7Z6E9-2 Q7Z6E9 1218 1234 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 3;4 0.0017371 60.093 By MS/MS By matching By matching By MS/MS By MS/MS By matching 3 1 1 1 1 8898400 4499200 997210 1067500 1152000 1182600 0 3861 1255 3904 17297;17298;17299;17300;17301;17302;17303 11486;11487;11488;11489;11490;11491 11488 5 KIHQEGDALPGHSKPSR NGKVKKKKKIHQEGDA PGHSKPSRSMESSPRK K K I S R S 1 1 0 1 0 1 1 2 2 1 1 2 0 0 2 2 0 0 0 0 0 17 2 1855.9653 Q1ED39;H3BPL4 Q1ED39 217 233 KNOP1 Lysine-rich nucleolar protein 1 yes no 4 0.0020978 61.265 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 6638500 0 0 815270 688540 2269200 2865600 3862 1157 3905 17304;17305;17306;17307 11492;11493 11492 2 KIKLQTPNTFPK EAETPQAKKIKLQTPN QTPNTFPKRKKGEKRA K K I P K R 0 0 1 0 0 1 0 0 0 1 1 3 0 1 2 0 2 0 0 0 0 12 2 1413.8344 Q14978;Q14978-3;Q14978-2 Q14978 602 613 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 3 0.0019852 90.434 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 2 2 2 68128000 18515000 9970700 8279100 0 29642000 1720300 3863 1120 3906 17308;17309;17310;17311;17312;17313;17314;17315 11494;11495;11496;11497 11495 4 KILCKSPQSDPADTPTNTK TTDEKTTKKILCKSPQ ADTPTNTKQRPKRSLK K K I T K Q 1 0 1 2 1 1 0 0 0 1 1 3 0 0 3 2 3 0 0 0 0 19 2 2100.0521 P46013;F5H4V4;P46013-2 P46013 1856 1874 MKI67 Antigen KI-67 no no 3;4 0.00037859 76.586 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 2 2 43838000 4533600 9636200 6686600 1835100 8130100 13016000 3864 919;920 3907 17316;17317;17318;17319;17320;17321;17322;17323;17324;17325;17326;17327;17328 11498;11499;11500;11501;11502;11503;11504;11505;11506;11507 11507 10 KIPQELNNITK TNTKLEVKKIPQELNN QELNNITKLNEHFSKF K K I T K L 0 0 2 0 0 1 1 0 0 2 1 2 0 0 1 0 1 0 0 0 0 11 1 1296.7402 Q9P2N5 Q9P2N5 606 616 RBM27 RNA-binding protein 27 yes yes 3 0.01265 72.34 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 3865 1579 3908 17329 11508 11508 1 KIQDLSDNREK LEVQLYQKKIQDLSDN DLSDNREKLASILKES K K I E K L 0 1 1 2 0 1 1 0 0 1 1 2 0 0 0 1 0 0 0 0 0 11 2 1344.6997 Q9BZD4 Q9BZD4 299 309 NUF2 Kinetochore protein Nuf2 yes yes 3 0.03166 64.73 By matching By matching By MS/MS By matching By matching By matching 1 556650 0 0 556650 0 0 0 3866 1470 3909 17330 11509 11509 1 KIQNDAGVRIQFK GRSGEMIKKIQNDAGV AGVRIQFKQDDGTGPE K K I F K Q 1 1 1 1 0 2 0 1 0 2 0 2 0 1 0 0 0 0 0 1 0 13 2 1515.8522 Q92945-2;Q92945;E7EP96;Q96I24;A6NJ37;Q96I24-2 Q92945-2 347 359 KHSRP;FUBP3 Far upstream element-binding protein 2;Far upstream element-binding protein 3 no no 3 1.9678E-73 137.4 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 55418000 1102500 5255600 7213500 5703100 8340800 27803000 3867 1366;1394 3910 17331;17332;17333;17334;17335;17336;17337 11510;11511;11512;11513;11514 11510 5 KIQYLIHCQWCEER TSADETAKKIQYLIHC HCQWCEERIFQKDGNM K K I E R I 0 1 0 0 2 2 2 0 1 2 1 1 0 0 0 0 0 1 1 0 0 14 1 1961.924 Q7Z2T5;Q7Z2T5-2 Q7Z2T5 481 494 TRMT1L TRMT1-like protein yes no 3 4.7107E-05 89.992 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 21509000 0 0 13247000 0 2846300 5416100 3868 1248 3911 17338;17339;17340 11515;11516 11515 2 KIRLDTETEGVPSTAIR TGEVVALKKIRLDTET GVPSTAIREISLLKEL K K I I R E 1 2 0 1 0 0 2 1 0 2 1 1 0 0 1 1 3 0 0 1 0 17 2 1885.0269 P24941-2;P24941;G3V5T9 P24941-2 34 50 CDK2 Cyclin-dependent kinase 2 yes no 3;4 0.0002962 71.143 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 2 2 2 23864000 956460 1702200 4643000 0 2723000 13839000 3869 589 3912 17341;17342;17343;17344;17345;17346;17347;17348 11517;11518;11519;11520;11521;11522 11521 6 KIRLESEEEGVPSTAIR TGQVVAMKKIRLESEE GVPSTAIREISLLKEL K K I I R E 1 2 0 0 0 0 4 1 0 2 1 1 0 0 1 2 1 0 0 1 0 17 2 1913.0218 P06493;P06493-2;E5RIU6 P06493 34 50 CDK1 Cyclin-dependent kinase 1 yes no 4 0.0029667 63.462 By matching By matching By matching By matching By matching By MS/MS 1 1 3965900 0 1459100 0 0 0 2506700 3870 799 3913 17349;17350 11523 11523 1 KIRQPAACPGGEEVDGAPR VSSPTKPKKIRQPAAC EEVDGAPRDEDFFLQV K K I P R D 3 2 0 1 1 1 2 3 0 1 0 1 0 0 3 0 0 0 0 1 0 19 2 2006.9956 Q8WUA4;Q8WUA4-2 Q8WUA4 226 244 GTF3C2 General transcription factor 3C polypeptide 2 yes no 4 0.0086621 41.323 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 8967700 276400 2562600 1987800 0 1144700 2996300 3871 1340 3914 17351;17352;17353;17354;17355 11524;11525 11524 2 KISTVVSSKEVNK LRATDGKKKISTVVSS VSSKEVNKFQMAYSNL K K I N K F 0 0 1 0 0 0 1 0 0 1 0 3 0 0 0 3 1 0 0 3 0 13 2 1417.814 P37108;H0YLA2 P37108 66 78 SRP14 Signal recognition particle 14 kDa protein yes no 3 1.3219E-73 139.19 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 72474000 8327000 12450000 13330000 8200400 10624000 19543000 3872 903 3915 17356;17357;17358;17359;17360;17361 11526;11527;11528;11529 11528 4 KITIADCGQLE SRNGKTSKKITIADCG IADCGQLE________ K K I L E - 1 0 0 1 1 1 1 1 0 2 1 1 0 0 0 0 1 0 0 0 0 11 1 1246.6227 P62937;B4DM82;Q567Q0 P62937 155 165 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 2 2.1094E-41 135.1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 391800000 63074000 77194000 73329000 47089000 12773000 118340000 3873 999 3916 17362;17363;17364;17365;17366;17367 11530;11531;11532;11533;11534 11532 5 KIVAIGTSDLDK LENLVQSKKIVAIGTS IGTSDLDKTQLEQLYQ K K I D K T 1 0 0 2 0 0 0 1 0 2 1 2 0 0 0 1 1 0 0 1 0 12 1 1258.7133 P48507 P48507 158 169 GCLM Glutamate--cysteine ligase regulatory subunit yes yes 2;3 0.0015531 72.29 By matching By matching By matching By matching By matching By MS/MS 1 2 2 4391200 0 902590 638480 0 0 2850100 3874 931 3917 17368;17369;17370;17371;17372 11535;11536 11535 2 KKAGPGSLELCGLPSQK PQRRRLQKKKAGPGSL LCGLPSQKTASLKKRK K K K Q K T 1 0 0 0 1 1 1 3 0 0 3 3 0 0 2 2 0 0 0 0 0 17 2 1768.9506 Q14684-2;Q14684 Q14684-2 555 571 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 3 2.4481E-57 119.04 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 67286000 17844000 8737600 11742000 10740000 5645700 12576000 3875 1111 3918 17373;17374;17375;17376;17377;17378 11537;11538;11539;11540;11541 11540 5 KKGGPSPGDVEAIK GAGLPTDKKKGGPSPG PGDVEAIKNAIANAST K K K I K N 1 0 0 1 0 0 1 3 0 1 0 3 0 0 2 1 0 0 0 1 0 14 2 1381.7565 P09661;H0YLR3;H0YMA0 P09661 192 205 SNRPA1 U2 small nuclear ribonucleoprotein A yes no 3 3.4153E-05 79.614 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 9549800 0 2400200 0 504620 3320300 3324700 3876 814 3919 17379;17380;17381;17382 11542 11542 0 KKPNPVEEEPSR KVLKQRAKKKPNPVEE PVEEEPSRRRPRAPKE K K K S R R 0 1 1 0 0 0 3 0 0 0 0 2 0 0 3 1 0 0 0 1 0 12 2 1408.731 P46013;F5H4V4;P46013-2 P46013 2652 2663 MKI67 Antigen KI-67 no no 3 0.010179 71.176 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 6648900 0 1743500 2432000 515220 161800 1796300 3877 919;920 3920 17383;17384;17385;17386;17387 11543;11544;11545 11544 3 KLALAGIGQPVKK RKKNEEFKKLALAGIG GIGQPVKKSVSQVTKS K K L K K S 2 0 0 0 0 1 0 2 0 1 2 3 0 0 1 0 0 0 0 1 0 13 2 1321.8446 Q9ULW0;Q96RR5 Q9ULW0 237 249 TPX2;HCA90 Targeting protein for Xklp2 yes no 3 3.6555E-16 112.84 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 26145000 0 6869100 6511300 4648500 2141500 5974800 3878 1611 3921 17388;17389;17390;17391;17392 11546;11547;11548;11549;11550;11551 11548 6 KLASQGDSISSQLGPIHPPPR DGDQPESKKLASQGDS GPIHPPPRTSMTEEYR K K L P R T 1 1 0 1 0 2 0 2 1 2 2 1 0 0 4 4 0 0 0 0 0 21 1 2184.1651 Q92945-2;Q92945;E7EP96 Q92945-2 122 142 KHSRP Far upstream element-binding protein 2 yes no 3;4 1.7323E-34 106.89 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 3 3 3 147400000 51087000 3685200 52183000 12882000 7135500 20431000 3879 1366 3922 17393;17394;17395;17396;17397;17398;17399;17400;17401;17402;17403;17404;17405;17406 11552;11553;11554;11555;11556;11557;11558;11559;11560;11561;11562;11563;11564 11558 12 KLAVGDNNSKWVK DLAEAKKKKLAVGDNN DNNSKWVKHWVKGGYY K K L V K H 1 0 2 1 0 0 0 1 0 0 1 3 0 0 0 1 0 1 0 2 0 13 2 1457.7991 P46940;H0YLE8 P46940 675 687 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 3 6.1615E-05 98 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 10010000 958170 2178400 3615500 3257700 0 0 3880 929 3923 17407;17408;17409;17410 11565;11566;11567;11568;11569 11566 5 KLDDTPSGAGKFPAGHSVIQLAR LGEYLKGRKLDDTPSG HSVIQLARRQDSDLVQ R K L A R R 3 1 0 2 0 1 0 3 1 1 2 2 0 1 2 2 1 0 0 1 0 23 2 2364.255 Q9HC52;C9J6K3 Q9HC52 230 252 CBX8 Chromobox protein homolog 8 yes no 4 0.00028746 56.404 By matching By matching By matching By matching By matching By MS/MS 1 18448000 0 0 0 0 0 18448000 3881 1519 3924 17411 11570 11570 1 KLDVEEPDSANSSFYSTR IINITMTKKLDVEEPD NSSFYSTRSAPASQAS K K L T R S 1 1 1 2 0 0 2 0 0 0 1 1 0 1 1 4 1 0 1 1 0 18 1 2043.9385 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9 Q14980-2 1808 1825 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2;3 3.3693E-91 131.37 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 1 2 95439000 29672000 9362700 20073000 5360100 16850000 14121000 3882 1121 3925 17412;17413;17414;17415;17416;17417;17418;17419;17420;17421 11571;11572;11573;11574;11575;11576;11577 11576 7 KLEDGPKFLK KIDRRSGKKLEDGPKF EDGPKFLKSGDAAIVD K K L L K S 0 0 0 1 0 0 1 1 0 0 2 3 0 1 1 0 0 0 0 0 0 10 2 1173.6758 Q5VTE0;P68104;Q6IQ15;F8W6I0 Q5VTE0 386 395 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 2 1.9972E-34 136.5 By matching By MS/MS By matching By matching By matching By matching 1 1 19736000 0 7254000 0 0 12482000 0 3883 1006 3926 17422;17423 11578 11578 1 KLEELELDEQQRK TNLEALQKKLEELELD ELDEQQRKRLEAFLTQ K K L R K R 0 1 0 1 0 2 4 0 0 0 3 2 0 0 0 0 0 0 0 0 0 13 2 1656.8683 Q02750-2;Q02750 Q02750-2 36 48 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 yes no 3 0.0065816 71.976 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 5237900 0 842430 1144100 643900 1119200 1488200 3884 1034 3927 17424;17425;17426;17427;17428 11579;11580 11580 1 KLEMCSEIKGPQK MVTQDVLKKLEMCSEI SEIKGPQKEMIVKCFE K K L Q K E 0 0 0 0 1 1 2 1 0 1 1 3 1 0 1 1 0 0 0 0 0 13 2 1546.7847 Q9NUA8;F8WAI8;B1AKC8 Q9NUA8 264 276 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes no 3 0.013034 62.528 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 5120600 0 0 1053000 1272000 1410200 1385400 3885 1545 3928 17429;17430;17431;17432 11581 11581 1 KLENCNYAVELGKHPAK PKLGANMKKLENCNYA ELGKHPAKFSLVGIGG K K L A K F 2 0 2 0 1 0 2 1 1 0 2 3 0 0 1 0 0 0 1 1 0 17 2 1970.0044 B7Z6M1;F8W8D8;B4DGB4;P13797;B4DI60 B7Z6M1 414 430 PLS3 Plastin-3 yes no 3;4 0.00099908 66.826 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 2 2 13680000 0 2917600 1761400 0 2396600 6604300 3886 87 3929 17433;17434;17435;17436;17437;17438;17439 11582;11583;11584 11584 2 KLFTSPLCDVSK SSPPVTPKKLFTSPLC SPLCDVSKKSPFRKSK K K L S K K 0 0 0 1 1 0 0 0 0 0 2 2 0 1 1 2 1 0 0 1 0 12 1 1393.7275 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 1309 1320 TICRR Treslin yes no 3 0.027882 67.234 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 3887 1249 3930 17440 11585 11585 1 KLFVGGLK PGAHAKVKKLFVGGLK KLFVGGLKGDVAEGDL K K L L K G 0 0 0 0 0 0 0 2 0 0 2 2 0 1 0 0 0 0 0 1 0 8 1 860.54837 Q13151 Q13151 99 106 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 2 0.039261 98.523 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 40549000 4940800 0 5999100 3220100 5523100 20866000 3888 1074 3931 17441;17442;17443;17444;17445 11586;11587 11586 2 KLGAGEGGEASVSPEK TPRSKKKKKLGAGEGG EASVSPEKTSTTSKGK K K L E K T 2 0 0 0 0 0 3 4 0 0 1 2 0 0 1 2 0 0 0 1 0 16 1 1514.7577 Q13428-7;E7ETY2;Q13428-6;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 1367 1382 TCOF1 Treacle protein no no 2;3 9.1241E-16 97.214 By MS/MS By matching By MS/MS By matching By MS/MS By matching 3 1 2 2 9410700 4638900 778760 1057000 0 2935900 0 3889 1082;383 3932 17446;17447;17448;17449;17450;17451;17452;17453 11588;11589;11590;11591;11592;11593 11593 6 KLGDAEEVESWPK K L P K 1 0 0 1 0 0 3 1 0 0 1 2 0 0 1 1 0 1 0 1 0 13 1 1486.7304 REV__Q8WX94 yes no 2 0.037486 58.098 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2 18650000 0 1860500 1966200 1577900 2690400 10555000 + 3890 1670 3933 17454;17455;17456;17457;17458;17459 11594 11594 1 KLGNNCVFAPADVTSEK SGGEAQAKKLGNNCVF PADVTSEKDVQTALAL K K L E K D 2 0 2 1 1 0 1 1 0 0 1 2 0 1 1 1 1 0 0 2 0 17 1 1848.904 Q5H928;Q99714-2;Q99714 Q5H928 53 69 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 3 0.00058432 69.935 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 38717000 5518700 2701400 15857000 3696500 1588100 9355600 3891 1181 3934 17460;17461;17462;17463;17464;17465 11595;11596;11597;11598 11597 4 KLHDFQDEIVENSVTKEK AQLELAQKKLHDFQDE ENSVTKEKDMFNFKRA K K L E K D 0 0 1 2 0 1 3 0 1 1 1 3 0 1 0 1 1 0 0 2 0 18 2 2158.0906 Q5VTR2 Q5VTR2 857 874 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 3;4 9.4937E-05 83.758 By matching By matching By MS/MS By matching By matching By MS/MS 1 2 2 2 12386000 0 947810 4269500 0 2107300 5061700 3892 1204 3935 17466;17467;17468;17469;17470;17471;17472 11599;11600;11601;11602 11600 4 KLIIVASQAMR EAFDRWGKKLIIVASQ IVASQAMRYRALIGQE K K L M R Y 2 1 0 0 0 1 0 0 0 2 1 1 1 0 0 1 0 0 0 1 0 11 1 1228.7326 Q12789-3;Q12789 Q12789-3 148 158 GTF3C1 General transcription factor 3C polypeptide 1 yes no 3 0.00020071 97.163 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 4066300 0 0 0 634650 681680 2749900 3893 1059 3936 17473;17474;17475 11603;11604;11605;11606 11605 4 KLIQESDQHLKDVEK KFITYRSKKLIQESDQ QHLKDVEKILQNDKRY K K L E K I 0 0 0 2 0 2 2 0 1 1 2 3 0 0 0 1 0 0 0 1 0 15 2 1808.9632 O14776-2;O14776 O14776-2 1014 1028 TCERG1 Transcription elongation regulator 1 yes no 4 0.00070354 76.357 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 5853500 1657200 0 0 2214000 0 1982300 3894 696 3937 17476;17477;17478 11607;11608;11609 11609 3 KLLASANLEEVTMK EELKETIKKLLASANL NLEEVTMKQICKKVYE K K L M K Q 2 0 1 0 0 0 2 0 0 0 3 2 1 0 0 1 1 0 0 1 0 14 1 1545.8436 P35659;P35659-2;B4DFG0;H0Y993 P35659 331 344 DEK Protein DEK yes no 2;3 4.7906E-199 168.93 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 2 1 87130000 20452000 11674000 24169000 22829000 8005100 0 3895 901 3938 17479;17480;17481;17482;17483;17484 11610;11611;11612;11613;11614 11614 5 KLLASANLEEVTMKQICK EELKETIKKLLASANL VTMKQICKKVYENYPT K K L C K K 2 0 1 0 1 1 2 0 0 1 3 3 1 0 0 1 1 0 0 1 0 18 2 2075.1119 P35659;P35659-2;B4DFG0;H0Y993 P35659 331 348 DEK Protein DEK yes no 3 0 225.01 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 1 1 2 209290000 66606000 15412000 77725000 49550000 0 0 3896 901 3939;3940 17485;17486;17487;17488;17489;17490 11615;11616;11617;11618;11619;11620 11615 100 4 KLLDLVQQSCNYK LADAHLTKKLLDLVQQ VQQSCNYKQLRKGANE K K L Y K Q 0 0 1 1 1 2 0 0 0 0 3 2 0 0 0 1 0 0 1 1 0 13 1 1607.8341 P55769;B1AHD1 P55769 21 33 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 2;3 1.9111E-130 155.14 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 1 125120000 18404000 66059000 10148000 10525000 8206400 11781000 3897 969 3941 17491;17492;17493;17494;17495;17496;17497;17498 11621;11622;11623;11624;11625;11626;11627;11628 11627 7 KLLDNSHLPATFK LPNCRATKKLLDNSHL SHLPATFKVSSSPQKE K K L F K V 1 0 1 1 0 0 0 0 1 0 3 2 0 1 1 1 1 0 0 0 0 13 1 1482.8195 Q7Z5J4-3;E7EVZ3;Q7Z5J4;A8MTC3;Q7Z5J4-2;C9JWB0 Q7Z5J4-3 1176 1188 RAI1 Retinoic acid-induced protein 1 yes no 3 0.0053547 55.196 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 11449000 5112000 0 6337500 0 0 0 3898 39 3942 17499;17500 11629;11630;11631 11630 3 KLLEDTLFPSSK EELLASPKKLLEDTLF DTLFPSSKKLKKDNQE K K L S K K 0 0 0 1 0 0 1 0 0 0 3 2 0 1 1 2 1 0 0 0 0 12 1 1376.7551 Q96JM3 Q96JM3 606 617 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.0047218 59.796 By matching By MS/MS By matching By matching By matching By matching 1 4770500 0 4770500 0 0 0 0 3899 1399 3943 17501 11632 11632 1 KLLNRDIQVGK MSLKHLTKKLLNRDIQ NRDIQVGKSGHSSVED K K L G K S 0 1 1 1 0 1 0 1 0 1 2 2 0 0 0 0 0 0 0 1 0 11 2 1282.7721 Q9H9L3 Q9H9L3 309 319 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 yes yes 3 0.0044873 91.701 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 87975000 8251600 14617000 13350000 16438000 15505000 19814000 3900 1509 3944 17502;17503;17504;17505;17506;17507 11633;11634;11635;11636 11633 4 KLLTDGYACEVR PADIPKNKKLLTDGYA DGYACEVRCQNIYLTT K K L V R C 1 1 0 1 1 0 1 1 0 0 2 1 0 0 0 0 1 0 1 1 0 12 1 1423.7129 O15226;G3V1N1 O15226 234 245 NKRF NF-kappa-B-repressing factor yes no 3 0.0009269 78.287 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 18012000 4475500 1794000 1155700 1359200 4771400 4456300 3901 578 3945 17508;17509;17510;17511;17512;17513 11637;11638;11639;11640 11638 4 KLLVPAAEGEDSLK KRAVEEVKKLLVPAAE AEGEDSLKKMQLMELA K K L L K K 2 0 0 1 0 0 2 1 0 0 3 2 0 0 1 1 0 0 0 1 0 14 1 1468.8137 Q96PU8-3;Q96PU8;Q96PU8-5;Q96PU8-9;Q96PU8-8;Q96PU8-6;H0YG47;F5GXS8;F5GYM3;H0YGD6 Q96PU8-3 177 190 QKI Protein quaking yes no 3 0.0098799 45.614 By matching By matching By MS/MS By matching By matching By matching 1 1 2271200 0 0 1324200 947010 0 0 3902 1412 3946 17514;17515 11641 11641 1 KLLVPAAEGEDSLKK KRAVEEVKKLLVPAAE EGEDSLKKMQLMELAI K K L K K M 2 0 0 1 0 0 2 1 0 0 3 3 0 0 1 1 0 0 0 1 0 15 2 1596.9087 Q96PU8-3;Q96PU8;Q96PU8-5;Q96PU8-9;Q96PU8-8;Q96PU8-6;H0YG47;F5GXS8;F5GYM3;H0YGD6 Q96PU8-3 177 191 QKI Protein quaking yes no 3 5.6919E-70 134.37 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 29948000 5609200 11516000 3616500 1969700 2566200 4671000 3903 1412 3947 17516;17517;17518;17519;17520;17521;17522 11642;11643;11644;11645;11646;11647 11643 6 KLNESLDENFKK IEISSTHKKLNESLDE SLDENFKKFHKEIIHE K K L K K F 0 0 2 1 0 0 2 0 0 0 2 3 0 1 0 1 0 0 0 0 0 12 2 1463.762 Q9UHR4 Q9UHR4 84 95 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 3 1.278E-06 101.56 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 9422800 3659700 820410 691400 971380 1929100 1350800 3904 1595 3948 17523;17524;17525;17526;17527;17528;17529 11648;11649;11650;11651 11650 4 KLPAFATIPIHQLQHEK LRQVVFGKKLPAFATI IHQLQHEKKYDIYFAD K K L E K K 2 0 0 0 0 2 1 0 2 2 2 2 0 1 2 0 1 0 0 0 0 17 1 1970.1102 H3BQQ2;Q86UK7-2;Q86UK7-3;Q86UK7 H3BQQ2 25 41 ZNF598 Zinc finger protein 598 yes no 4 0.017017 37.477 By matching By matching By matching By matching By matching By MS/MS 1 17027000 0 0 0 0 0 17027000 3905 639 3949 17530 11652 11652 1 KLPDGMDQLPEK CDACLKWRKLPDGMDQ GMDQLPEKWYCSNNPD R K L E K W 0 0 0 2 0 1 1 1 0 0 2 2 1 0 2 0 0 0 0 0 0 12 1 1369.6912 Q14149 Q14149 421 432 MORC3 MORC family CW-type zinc finger protein 3 yes yes 3 0.0061479 57.425 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4254000 615300 755080 481960 0 0 2401700 3906 1096 3950 17531;17532;17533;17534 11653 11653 1 KLPIVACFHLK STKQLTMKKLPIVACF IVACFHLKRFEHSAKL K K L L K R 1 0 0 0 1 0 0 0 1 1 2 2 0 1 1 0 0 0 0 1 0 11 1 1324.7689 Q9UPT9-2;Q9UPT9;Q70EK9 Q9UPT9-2 388 398 USP22;USP51 Ubiquitin carboxyl-terminal hydrolase 22;Ubiquitin carboxyl-terminal hydrolase 51 yes no 3 0.0013984 86.189 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 14963000 0 4436900 7377600 0 0 3148500 3907 1621 3951 17535;17536;17537 11654;11655;11656 11655 3 KLPNWQMEVSK ARRHLSAKKLPNWQME NWQMEVSKLNDIALPP K K L S K L 0 0 1 0 0 1 1 0 0 0 1 2 1 0 1 1 0 1 0 1 0 11 1 1358.7017 Q13118-2;Q13118 Q13118-2 445 455 KLF10 Krueppel-like factor 10 yes no 3 0.034042 41.704 By matching By matching By MS/MS By matching By matching By matching 1 604720 0 0 604720 0 0 0 3908 1070 3952 17538 11657 11657 1 KLPPPPGSPLGHSPTASPPPTAR LHISPLAKKLPPPPGS ASPPPTARKMFPGLAA K K L A R K 2 1 0 0 0 0 0 2 1 0 2 1 0 0 9 3 2 0 0 0 0 23 1 2258.2172 B7ZM82;B3KVH1;O95785;O95785-2 B7ZM82 453 475 WIZ Protein Wiz yes no 4 0.0013884 49.433 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 18680000 8604800 0 1439200 0 1933700 6702200 3909 212 3953 17539;17540;17541;17542 11658;11659 11659 2 KLPSQPTTDTSTDKER KTSERASKKLPSQPTT DTSTDKERTSEDMADK K K L E R T 0 1 0 2 0 1 1 0 0 0 1 2 0 0 2 2 4 0 0 0 0 16 2 1802.901 Q8NFC6 Q8NFC6 236 251 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 3 0.0097663 54.281 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 3360800 658500 759180 655430 0 1287600 0 3910 1325 3954 17543;17544;17545;17546 11660 11660 1 KLPTSASVGCDIQNSVGSNIK KNPTHSNKKLPTSASV NSVGSNIKSDGTLINQ K K L I K S 1 0 2 1 1 1 0 2 0 2 1 2 0 0 1 4 1 0 0 2 0 21 1 2174.1001 Q9H582-2;Q9H582;F5H7T9 Q9H582-2 193 213 ZNF644 Zinc finger protein 644 yes no 3 3.1352E-158 143.72 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 138540000 12413000 92348000 0 33779000 0 0 3911 1492 3955 17547;17548;17549 11661;11662 11661 2 KLQAGSIAIVRQTFNK PVAIKVFKKLQAGSIA IVRQTFNKEIKTMKKF K K L N K E 2 1 1 0 0 2 0 1 0 2 1 2 0 1 0 1 1 0 0 1 0 16 2 1773.0261 Q8NB16;I3L4A6 Q8NB16 234 249 MLKL Mixed lineage kinase domain-like protein yes no 3 1.1825E-50 124.16 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 28265000 0 0 19176000 0 2249100 6839500 3912 1314 3956 17550;17551;17552 11663;11664 11664 2 KLQCLNDVLGK KHPEKNQKKLQCLNDV CLNDVLGKKLNTSTKN K K L G K K 0 0 1 1 1 1 0 1 0 0 3 2 0 0 0 0 0 0 0 1 0 11 1 1286.7017 Q96QE3;Q96QE3-2 Q96QE3 769 779 ATAD5 ATPase family AAA domain-containing protein 5 yes no 3 0.017118 50.484 By matching By matching By matching By matching By matching By MS/MS 1 1 4751400 0 1622900 0 0 0 3128500 3913 1415 3957 17553;17554 11665 11665 1 KLQEVDSLWK IFKVLNEKKLQEVDSL QEVDSLWKEFETPEKA K K L W K E 0 0 0 1 0 1 1 0 0 0 2 2 0 0 0 1 0 1 0 1 0 10 1 1244.6765 Q9Y2X3;F8WED0 Q9Y2X3 21 30 NOP58 Nucleolar protein 58 yes no 2;3 0.0055785 104.07 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 2 2 18963000 5817100 2278600 0 3237300 0 7630300 3914 1640 3958 17555;17556;17557;17558;17559;17560 11666;11667;11668;11669;11670 11670 5 KLQKQGLLQVTPK NKALRKIRKLQKQGLL GLLQVTPKGFICTVDT R K L P K G 0 0 0 0 0 3 0 1 0 0 3 3 0 0 1 0 1 0 0 1 0 13 2 1479.9137 P40879 P40879 580 592 SLC26A3 Chloride anion exchanger yes yes 3 0.0048019 80.014 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 11352000 0 787010 3029300 3541200 196080 3798700 3915 908 3959 17561;17562;17563;17564;17565 11671 11671 1 KLQLEETMPSPYGR KVGKPKVKKLQLEETM TMPSPYGRRIIPEITA K K L G R R 0 1 0 0 0 1 2 1 0 0 2 1 1 0 2 1 1 0 1 0 0 14 1 1647.829 Q02880-2;Q02880;B4DLV2 Q02880-2 1222 1235 TOP2B DNA topoisomerase 2-beta yes no 3 0.0010995 65.219 By matching By MS/MS By matching By matching By matching By matching 1 3573300 0 3573300 0 0 0 0 3916 1035 3960 17566 11672 11672 1 KLQLEETMPSPYGRR KVGKPKVKKLQLEETM MPSPYGRRIIPEITAM K K L R R I 0 2 0 0 0 1 2 1 0 0 2 1 1 0 2 1 1 0 1 0 0 15 2 1803.9302 Q02880-2;Q02880;B4DLV2 Q02880-2 1222 1236 TOP2B DNA topoisomerase 2-beta yes no 3;4 5.2906E-14 105.95 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 2 1 1 1 19530000 1066300 903750 12481000 1137700 368250 3573100 3917 1035 3961 17567;17568;17569;17570;17571;17572;17573 11673;11674;11675;11676 11674 4 KLQLGIEEDLAEPSK DIEKMEGKKLQLGIEE EDLAEPSKSQTRKPKC K K L S K S 1 0 0 1 0 1 3 1 0 1 3 2 0 0 1 1 0 0 0 0 0 15 1 1668.8934 Q86UV5;Q86UV5-2;Q86UV5-3;Q86UV5-7 Q86UV5 381 395 USP48 Ubiquitin carboxyl-terminal hydrolase 48 yes no 3 0.0021771 54.811 By matching By MS/MS By matching By matching By matching By matching 1 1 9050200 0 7971600 0 1078600 0 0 3918 1264 3962 17574;17575 11677 11677 1 KLQSLQSELQFK DKEKEFSKKLQSLQSE LQSELQFKDAEMNELR K K L F K D 0 0 0 0 0 3 1 0 0 0 3 2 0 1 0 2 0 0 0 0 0 12 1 1447.8035 C9IZM8;B5MEB7;Q8WXE1-3;Q8WXE1-2;Q8WXE1;F8WE08 C9IZM8 91 102 ATRIP ATR-interacting protein yes no 3 3.7736E-59 137.4 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 21212000 0 21212000 0 0 0 0 3919 176 3963 17576;17577 11678;11679 11678 2 KLQVYEGGGQPPPQDLPGSPK AEVAALRKKLQVYEGG QDLPGSPKSGPPPEHL K K L P K S 0 0 0 1 0 3 1 4 0 0 2 2 0 0 5 1 0 0 1 1 0 21 1 2191.1273 H9KV46;Q86Y91;Q86Y91-2;Q86Y91-3;Q86Y91-4 H9KV46 386 406 KIF18B Kinesin-like protein KIF18B yes no 3 0.0038067 42.618 By matching By matching By matching By MS/MS By matching By matching 1 2 3728300 0 990320 0 2738000 0 0 3920 675 3964 17578;17579;17580 11680;11681 11681 2 KLRHPTPTMLSIQK KKGMEELKKLRHPTPT PTMLSIQKWQFSMSAI K K L Q K W 0 1 0 0 0 1 0 0 1 1 2 2 1 0 2 1 2 0 0 0 0 14 2 1648.9447 O14776-2;O14776;G3V220 O14776-2 565 578 TCERG1 Transcription elongation regulator 1 yes no 4 0.0037656 58.04 By matching By matching By matching By matching By matching By MS/MS 1 1 3438400 0 0 0 0 1105400 2333000 3921 696 3965 17581;17582 11682;11683 11682 2 KLRQYISVK GIRDRAVKKLRQYISV LRQYISVKTQRETGGF K K L V K T 0 1 0 0 0 1 0 0 0 1 1 2 0 0 0 1 0 0 1 1 0 9 2 1133.6921 Q14684-2;Q14684 Q14684-2 30 38 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 2 0.00392 112.11 By matching By matching By matching By matching By matching By MS/MS 1 1 6345000 0 0 0 0 3225500 3119500 3922 1111 3966 17583;17584 11684 11684 1 KLSQLQVEAAR EDTTELRKKLSQLQVE QLQVEAARLGILPVGR K K L A R L 2 1 0 0 0 2 1 0 0 0 2 1 0 0 0 1 0 0 0 1 0 11 1 1241.7092 Q9P2N5 Q9P2N5 925 935 RBM27 RNA-binding protein 27 yes yes 3 0.0031059 70.728 By matching By MS/MS By matching By matching By matching By matching 1 1 2858700 0 1037200 0 0 0 1821500 3923 1579 3967 17585;17586 11685 11685 1 KLSVERVYQK ANKNDSSKKLSVERVY SVERVYQKKTQLEHIL K K L Q K K 0 1 0 0 0 1 1 0 0 0 1 2 0 0 0 1 0 0 1 2 0 10 2 1248.719 Q02880-2;Q02880;E9PCY5;Q6LBI8 Q02880-2 43 52 TOP2B;topIIb DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 3 0.027355 79.148 By matching By matching By matching By matching By MS/MS By matching 1 1 6319200 0 0 4941800 0 1377400 0 3924 1035 3968 17587;17588 11686 11686 1 KLTQTSGETTHTDKVPGGEDK QKELSALKKLTQTSGE KVPGGEDKSINAFRET K K L D K S 0 0 0 2 0 1 2 3 1 0 1 3 0 0 1 1 5 0 0 1 0 21 2 2228.0921 P46013;F5H4V4;P46013-2 P46013 1409 1429 MKI67 Antigen KI-67 no no 3;4 3.3857E-14 89.659 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 1 2 150650000 21309000 28295000 40600000 19025000 5941700 35479000 3925 919;920 3969 17589;17590;17591;17592;17593;17594;17595;17596;17597;17598;17599;17600 11687;11688;11689;11690;11691;11692;11693;11694;11695 11687 9 KLVESLPQEIKANVAK GINLVQAKKLVESLPQ EIKANVAKAEAEKIKA K K L A K A 2 0 1 0 0 1 2 0 0 1 2 3 0 0 1 1 0 0 0 2 0 16 2 1766.0302 P52815;B4DLN1 P52815 163 178 MRPL12;SLC25A10 39S ribosomal protein L12, mitochondrial yes no 3 0.004502 75.998 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 14468000 6909000 0 0 0 0 7559400 3926 99 3970 17601;17602 11696;11697 11696 2 KLYGAQFHPEVGLTENGK AGIANESKKLYGAQFH VGLTENGKVILKNFLY K K L G K V 1 0 1 0 0 1 2 3 1 0 2 2 0 1 1 0 1 0 1 1 0 18 1 1987.0163 F8W720;B4DUT7;P49915 F8W720 84 101 GMPS GMP synthase [glutamine-hydrolyzing] yes no 3;4 9.712E-59 120.9 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 1 2 69864000 15721000 3222600 35528000 3023900 3020800 9348000 3927 129 3971 17603;17604;17605;17606;17607;17608;17609;17610;17611 11698;11699;11700;11701;11702;11703 11703 5 KLYTGPGLAIHCMQVHK FKCHICHKKLYTGPGL IHCMQVHKETIDAVPN K K L H K E 1 0 0 0 1 1 0 2 2 1 2 2 1 0 1 0 1 0 1 1 0 17 1 1952.0124 A8MTG3;O43670-2;O43670;E1P660;H0Y3M2 A8MTG3 43 59 ZNF207 Zinc finger protein 207 yes no 4 0.00013368 75.998 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 2 1 13627000 1161500 1612300 5378100 2118200 0 3356700 3928 40 3972 17612;17613;17614;17615;17616;17617 11704;11705;11706;11707;11708;11709;11710 11706 5 KMLFDIPQNNYLK K M L K 0 0 2 1 0 1 0 0 0 1 2 2 1 1 1 0 0 0 1 0 0 13 1 1622.849 REV__E7EMN3 yes no 3 0.0053241 55.258 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 12642000 0 0 5954900 1535800 1987400 3163900 + 3929 1669 3973 17618;17619;17620;17621 11711 11711 1 KMQQENMKPQEQLTLEPYER AVFASEVKKMQQENMK LTLEPYERDHAVVVGV K K M E R D 0 1 1 0 0 4 4 0 0 0 2 2 2 0 2 0 1 0 1 0 0 20 2 2519.2148 P22087 P22087 285 304 FBL rRNA 2-O-methyltransferase fibrillarin yes yes 4 0.00014396 65.085 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 12823000 6686600 1162000 0 1520500 1621200 1833100 3930 862 3974 17622;17623;17624;17625;17626 11712;11713;11714;11715 11715 4 KMQSTLISAAR EIMNDLEKKMQSTLIS STLISAARDLGLDPGK K K M A R D 2 1 0 0 0 1 0 0 0 1 1 1 1 0 0 2 1 0 0 0 0 11 1 1204.6598 B4E2Z2;P43246;E9PHA6;E7EU21;B4DL39;B4DSB9;E9PCI8 B4E2Z2 425 435 MSH2 DNA mismatch repair protein Msh2 yes no 3 0.032559 76.332 By matching By matching By matching By matching By matching By MS/MS 1 1 2785000 0 637250 0 0 0 2147800 3931 162 3975 17627;17628 11716 11716 0 KMRVMSNLVEHNGVLESEAGQPQALGSSGTCSSLK TASLKKRKKMRVMSNL SGTCSSLKKQKLRAES K K M L K K 2 1 2 0 1 2 3 4 1 0 4 2 2 0 1 6 1 0 0 3 0 35 2 3700.7971 Q14684-2;Q14684 Q14684-2 580 614 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 4;5 3.5187E-52 87.605 By matching By matching By MS/MS By MS/MS By matching By matching 1 2 26706000 0 0 9615500 17091000 0 0 3932 1111 3976;3977 17629;17630;17631 11717;11718;11719 11718 135;136 2 KMSTPIEVLCK KYERISEKKMSTPIEV TPIEVLCKGYPSEFAT K K M C K G 0 0 0 0 1 0 1 0 0 1 1 2 1 0 1 1 1 0 0 1 0 11 1 1304.6832 P49674;B0QY35;B0QY34;H0Y645;P48730-2;B4DIJ9;P48730;Q59FJ7;H7BYT1 P48730-2 232 242 CSNK1E;CSNK1D Casein kinase I isoform epsilon;Casein kinase I isoform delta no no 3 0.0017542 82.85 By matching By matching By matching By matching By matching By MS/MS 1 1 2961700 0 441190 0 0 0 2520500 3933 932;939 3978 17632;17633 11720 11720 1 KNAAPFRSEVCFGK ITKRVKAKKNAAPFRS RSEVCFGKEGLWKLLG K K N G K E 2 1 1 0 1 0 1 1 0 0 0 2 0 2 1 1 0 0 0 1 0 14 2 1609.8035 Q9BVP2-2;Q9BVP2 Q9BVP2-2 212 225 GNL3 Guanine nucleotide-binding protein-like 3 yes no 4 0.004041 57.52 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 3359000 0 0 796050 726280 600790 1235900 3934 1455 3979 17634;17635;17636;17637 11721 11721 1 KNEESGAVVVPGTR KFATFLQRKNEESGAV AVVVPGTRSRFFCSSD R K N T R S 1 1 1 0 0 0 2 2 0 0 0 1 0 0 1 1 1 0 0 3 0 14 1 1441.7525 Q9UQ84-4;Q9UQ84 Q9UQ84-4 490 503 EXO1 Exonuclease 1 yes no 3 0.0238 38.14 By matching By matching By matching By matching By matching By MS/MS 1 605050 0 0 0 0 0 605050 3935 1624 3980 17638 11722 11722 1 KNESPFWK TQCLDNSKKNESPFWK KNESPFWKLYESVKKE K K N W K L 0 0 1 0 0 0 1 0 0 0 0 2 0 1 1 1 0 1 0 0 0 8 1 1034.5185 P46013;F5H4V4 P46013 232 239 MKI67 Antigen KI-67 yes no 2 9.7979E-05 117.81 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 22114000 0 4062700 5060400 1896900 2594200 8499400 3936 919 3981 17639;17640;17641;17642;17643 11723 11723 1 KNHVCQYYIYELQK LENEIFRKKNHVCQYY YYIYELQKRIAEMETQ K K N Q K R 0 0 1 0 1 2 1 0 1 1 1 2 0 0 0 0 0 0 3 1 0 14 1 1884.9193 E9PD53;Q9NTJ3;Q9NTJ3-2;E7ET04;C9JR83 E9PD53 294 307 SMC4 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 4 yes no 3 0.021481 39.033 By matching By matching By matching By matching By matching By MS/MS 1 1125400 0 0 0 0 0 1125400 3937 419 3982 17644 11724 11724 1 KNIGNGIISSPLTGK SVIPDHSKKNIGNGII ISSPLTGKRQDSGTMK K K N G K R 0 0 2 0 0 0 0 3 0 3 1 2 0 0 1 2 1 0 0 0 0 15 1 1497.8515 Q9P275;Q9P275-2;E9PEW0;F5H3B9 Q9P275 455 469 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 2;3 5.2047E-20 109.1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 57994000 19194000 4940300 16145000 4444200 6069800 7199900 3938 1576 3983 17645;17646;17647;17648;17649;17650;17651 11725;11726;11727;11728;11729;11730;11731;11732 11732 8 KNIVQHTTDSSLEEKQR TQKNKKEKKNIVQHTT SSLEEKQRTLDSGTSE K K N Q R T 0 1 1 1 0 2 2 0 1 1 1 2 0 0 0 2 2 0 0 1 0 17 2 2012.0287 Q9H501 Q9H501 170 186 ESF1 ESF1 homolog yes yes 4 0.003421 49.621 By matching By matching By matching By matching By matching By MS/MS 1 1 1848100 0 0 0 0 1008100 840020 3939 1490 3984 17652;17653 11733 11733 1 KNLDSTTVAIHDEEIYCK CFLCMVCRKNLDSTTV HDEEIYCKSCYGKKYG R K N C K S 1 0 1 2 1 0 2 0 1 2 1 2 0 0 0 1 2 0 1 1 0 18 1 2135.0205 Q16527;F8VW96;F8VQR7 Q16527 42 59 CSRP2 Cysteine and glycine-rich protein 2 yes no 3 6.7174E-59 122.16 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 8487300 0 3691600 0 0 1005200 3790500 3940 1152 3985 17654;17655;17656 11734;11735;11736 11736 3 KNLDSTTVAVHGEEIYCK CFLCMVCKKNLDSTTV HGEEIYCKSCYGKKYG K K N C K S 1 0 1 1 1 0 2 1 1 1 1 2 0 0 0 1 2 0 1 2 0 18 1 2062.9994 P21291;E9PND2;B3KVC9;E9PS42 P21291 42 59 CSRP1 Cysteine and glycine-rich protein 1 yes no 3;4 3.4451E-210 162.26 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 1 1 58263000 22539000 7399300 3700600 9197500 9613800 5812200 3941 859 3986 17657;17658;17659;17660;17661;17662;17663;17664 11737;11738;11739;11740;11741;11742;11743;11744;11745;11746;11747;11748 11743 12 KNLQYYDISAK KSIVFHRKKNLQYYDI QYYDISAKSNYNFEKP K K N A K S 1 0 1 1 0 1 0 0 0 1 1 2 0 0 0 1 0 0 2 0 0 11 1 1341.6929 P62826;B5MDF5;F5H018;B4DV51 P62826 142 152 RAN GTP-binding nuclear protein Ran yes no 2;3 3.0549E-19 130.56 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 3 2 49113000 8112900 5121300 6425200 5665000 11382000 12406000 3942 173 3987 17665;17666;17667;17668;17669;17670;17671;17672;17673;17674;17675;17676;17677;17678 11749;11750;11751;11752;11753;11754;11755;11756;11757;11758 11753 9 KNPASLPLTQAALK GPATQVSKKNPASLPL PLTQAALKVLAQKASE K K N L K V 3 0 1 0 0 1 0 0 0 0 3 2 0 0 2 1 1 0 0 0 0 14 1 1450.8508 Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 1065 1078 TCOF1 Treacle protein yes no 2;3 5.0633E-104 143.94 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 1 1 2 4 2 127050000 77576000 8583300 10458000 11453000 4140800 14834000 3943 1082 3988 17679;17680;17681;17682;17683;17684;17685;17686;17687;17688;17689;17690 11759;11760;11761;11762;11763;11764;11765;11766 11759 8 KNPLGNCGDINLVR FKEKCKDKKNPLGNCG CGDINLVRLGPEKSIN K K N V R L 0 1 3 1 1 0 0 2 0 1 2 1 0 0 1 0 0 0 0 1 0 14 1 1568.8093 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 2032 2045 SETX Probable helicase senataxin yes no 3 0.00079328 83.204 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 3591500 733120 941430 0 0 0 1917000 3944 1250 3989 17691;17692;17693 11767;11768;11769 11769 3 KNQKPSQVNGAPGSPTEPAGQK AKSPKLQKKNQKPSQV PTEPAGQKQHQKALPK K K N Q K Q 2 0 2 0 0 3 1 3 0 0 0 3 0 0 4 2 1 0 0 1 0 22 2 2219.1295 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 1174 1195 MYBBP1A Myb-binding protein 1A yes no 3;4 1.5415E-06 77.668 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 37073000 4865500 5680900 4144000 3778900 8972600 9630700 3945 682 3990 17694;17695;17696;17697;17698;17699;17700;17701;17702;17703;17704;17705 11770;11771;11772;11773;11774;11775;11776;11777;11778 11770 9 KNVEQNNLSDLIK DMCFNYAKKNVEQNNL NNLSDLIKVVKVPQKT K K N I K V 0 0 3 1 0 1 1 0 0 1 2 2 0 0 0 1 0 0 0 1 0 13 1 1513.81 Q86W50;I3L362;Q86W50-2;C9JQI1 Q86W50 144 156 METTL16 Methyltransferase-like protein 16 yes no 3 0.0094533 49.62 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 12321000 3287200 0 7826200 494510 712710 0 3946 1267 3991 17706;17707;17708;17709 11779;11780 11780 2 KNVFMYGCSIK DYHGHSRKKNVFMYGC FMYGCSIKETVWHTND K K N I K E 0 0 1 0 1 0 0 1 0 1 0 2 1 1 0 1 0 0 1 1 0 11 1 1345.6523 Q9UPW5-2;Q9UPW5;Q9UPW5-3 Q9UPW5-2 983 993 AGTPBP1 Cytosolic carboxypeptidase 1 yes no 2 0.040556 48.998 By matching By matching By matching By matching By matching By MS/MS 1 100800000 0 0 0 0 0 100800000 3947 1622 3992 17710 11781 11781 180 1 KNVGQFSGFPFEK PGTVSSLKKNVGQFSG FSGFPFEKGSVQYKKK K K N E K G 0 0 1 0 0 1 1 2 0 0 0 2 0 3 1 1 0 0 0 1 0 13 1 1483.746 P35659;P35659-2;B4DFG0;D6R9L5;D6RDA2 P35659 125 137 DEK Protein DEK yes no 2;3 7.5648E-34 121.42 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 2 68206000 0 9754000 0 14632000 0 43820000 3948 901 3993 17711;17712;17713;17714 11782;11783;11784;11785 11785 4 KPKEPQPEQPQPSTSAN KQKKKKTKKPKEPQPE PQPSTSAN________ K K P A N - 1 0 1 0 0 3 2 0 0 0 0 2 0 0 5 2 1 0 0 0 0 17 2 1861.917 G3V529;Q9GZR7;Q4V9L5;F5GYL3;F5H4V3 G3V529 800 816 DDX24 ATP-dependent RNA helicase DDX24 yes no 3 0.0051952 59.728 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 5562100 0 801850 476620 838010 1728000 1717600 3949 588 3994 17715;17716;17717;17718;17719 11786 11786 1 KPLNAFMLYMK EAKKPTIKKPLNAFML NAFMLYMKEM______ K K P M K E 1 0 1 0 0 0 0 0 0 0 2 2 2 1 1 0 0 0 1 0 0 11 1 1354.7141 E5RHL1;H0YAR8;Q5JRY4;H0YBC8;Q5JRY5;P36402-10;P36402-14;P36402-16;P36402-8;P36402-6;P36402-2;Q9UJU2-3;E9PDK3;E2GH20;P36402-9;D4PHA3;P36402-13;P36402-15;Q9UJU2-5;P36402-12;P36402-4;P36402-7;P36402-5;P36402;Q9UJU2-6;Q9UJU2;Q9NQB0-10;F8W742;Q9NQB0-9;Q9NQB0-4;B7WNT5;Q9NQB0-6;F8W7T5;Q9NQB0-2;P36402-11;G8JLE2;P36402-3;Q9HCS4;Q9NQB0-8;Q9NQB0-7;Q9NQB0-5;Q9NQB0-3;Q9NQB0 E5RHL1 131 141 TCF7;TCF7L2;LEF1;TCF7L1 Transcription factor 7;Lymphoid enhancer-binding factor 1;Transcription factor 7-like 2;Transcription factor 7-like 1 yes no 3 0.019769 53.597 By matching By matching By matching By matching By matching By MS/MS 1 628970 0 0 0 0 0 628970 3950 178 3995 17720 11787 11787 17 0 KPSMGVFKEK DFGASHSKKPSMGVFK SMGVFKEKRKKDSPFR K K P E K R 0 0 0 0 0 0 1 1 0 0 0 3 1 1 1 1 0 0 0 1 0 10 2 1149.6216 Q8IXN4;P20794-3;P20794;P20794-2 Q8IXN4 422 431 MAK Serine/threonine-protein kinase MAK yes no 2 0.030754 55.314 By matching By MS/MS By matching By matching By matching By matching 1 1 6348200 0 1764000 0 0 4584200 0 3951 858 3996 17721;17722 11788 11788 92 1 KQAQPSCAPASRPPAK SSTSAGGKKQAQPSCA PASRPPAKQQKIKENQ K K Q A K Q 4 1 0 0 1 2 0 0 0 0 0 2 0 0 4 2 0 0 0 0 0 16 2 1692.873 Q6W2J9;Q6W2J9-4;Q6W2J9-2;H7BYY2;A6NE70;H7C2V9 Q6W2J9 1305 1320 BCOR BCL-6 corepressor yes no 4 0.0025469 55.415 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 4426700 795910 0 1998300 392100 299320 941020 3952 1237 3997 17723;17724;17725;17726;17727 11789;11790 11790 2 KQEEGAEIQCEAETGGTHK KQSVVQEKKQEEGAEI AETGGTHKRDFSEIKS K K Q H K R 2 0 0 0 1 2 5 3 1 1 0 2 0 0 0 0 2 0 0 0 0 19 1 2100.9382 Q9UNY4;Q9UNY4-2 Q9UNY4 195 213 TTF2 Transcription termination factor 2 yes no 3;4 0.00071035 56.906 By MS/MS By matching By MS/MS By MS/MS By matching By matching 3 2 3 2 1 1 15207000 3273200 2832800 3826200 2200400 1491600 1582600 3953 1618 3998 17728;17729;17730;17731;17732;17733;17734;17735;17736;17737;17738;17739 11791;11792;11793;11794;11795 11794 5 KQEGPATQVDSAVGTLPATSPQSTSVQAK SSRISDGKKQEGPATQ QSTSVQAKGTNKLRKP K K Q A K G 4 0 0 1 0 4 1 2 0 0 1 2 0 0 3 4 4 0 0 3 0 29 1 2882.4621 Q13428-7;E7ETY2;Q13428-6 Q13428-7 1054 1082 TCOF1 Treacle protein yes no 3 3.2912E-31 88.834 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 43461000 30053000 0 8387600 0 5021000 0 3954 383 3999 17740;17741;17742 11796;11797;11798;11799 11799 4 KQELLEALTK YGLKSGLKKQELLEAL ELLEALTKHFQD____ K K Q T K H 1 0 0 0 0 1 2 0 0 0 3 2 0 0 0 0 1 0 0 0 0 10 1 1171.6812 B1AHC9;B1AHC8;P12956;F5H1I8 B1AHC9 546 555 XRCC6 X-ray repair cross-complementing protein 6 yes no 2 0.030335 85.924 By MS/MS By matching By matching By matching By matching By matching 1 2810600 2810600 0 0 0 0 0 3955 60 4000 17743 11800 11800 1 KQFDAGTVNYEQPTK EPPEPKRKKQFDAGTV VNYEQPTKDGIDHSNI K K Q T K D 1 0 1 1 0 2 1 1 0 0 0 2 0 1 1 0 2 0 1 1 0 15 1 1724.837 Q59HE6;H0YGC0;P52756 Q59HE6 414 428 RBM5 RNA-binding protein 5 yes no 3 0.0041907 48.899 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 2588700 0 1376500 0 0 0 1212200 3956 620 4001 17744;17745;17746 11801;11802 11801 2 KQFEPVEIKVVK DLLRLAEKKQFEPVEI PVEIKVVKKSEERPMT K K Q V K K 0 0 0 0 0 1 2 0 0 1 0 3 0 1 1 0 0 0 0 3 0 12 2 1442.8497 Q68D10-2;Q68D10;Q68D10-3;C9JCH5 Q68D10-2 179 190 SPTY2D1 Protein SPT2 homolog yes no 3 0.0085565 73.36 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 6071500 0 1414000 1569700 569020 814010 1704700 3957 1217 4002 17747;17748;17749;17750;17751 11803 11803 1 KQGGLGPMNIPLVSDPK LAWVNTPKKQGGLGPM IPLVSDPKRTIAQDYG K K Q P K R 0 0 1 1 0 1 0 3 0 1 2 2 1 0 3 1 0 0 0 1 0 17 1 1749.9447 Q06830 Q06830 93 109 PRDX1 Peroxiredoxin-1 yes yes 3 1.5579E-31 109.1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 3 1 2 474020000 8121600 183120000 10779000 212620000 7317500 52064000 3958 1044 4003;4004 17752;17753;17754;17755;17756;17757;17758;17759;17760;17761 11804;11805;11806;11807;11808;11809;11810;11811;11812 11807 124 9 KQGGLGPMNIPLVSDPKR LAWVNTPKKQGGLGPM PLVSDPKRTIAQDYGV K K Q K R T 0 1 1 1 0 1 0 3 0 1 2 2 1 0 3 1 0 0 0 1 0 18 2 1906.0459 Q06830 Q06830 93 110 PRDX1 Peroxiredoxin-1 yes yes 3;4 0.0016759 54.073 By matching By MS/MS By matching By MS/MS By matching By matching 2 2 22449000 0 13489000 0 8960300 0 0 3959 1044 4005 17762;17763;17764;17765 11813;11814;11815;11816 11813 4 KQHICHIQGCGK GSGDPGKKKQHICHIQ CHIQGCGKVYGKTSHL K K Q G K V 0 0 0 0 2 2 0 2 2 2 0 2 0 0 0 0 0 0 0 0 0 12 1 1464.7078 P08047;G5E9M8 P08047 624 635 SP1 Transcription factor Sp1 yes no 3 0.015007 47.971 By matching By MS/MS By matching By matching By matching By matching 1 265990 0 265990 0 0 0 0 3960 804 4006 17766 11817 11817 1 KQIEHQVLSSECHSK KYFPLLLKKQIEHQVL LSSECHSKQELEADVS K K Q S K Q 0 0 0 0 1 2 2 0 2 1 1 2 0 0 0 3 0 0 0 1 0 15 1 1808.8839 Q96QE3;Q96QE3-2 Q96QE3 970 984 ATAD5 ATPase family AAA domain-containing protein 5 yes no 3;4 0.00031348 82.578 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 2 2 2 2 2 13082000 421560 1980700 3060300 997270 1336100 5286500 3961 1415 4007 17767;17768;17769;17770;17771;17772;17773;17774;17775;17776;17777 11818;11819;11820;11821;11822;11823 11820 5 KQIREPVDLQK SEQLMRDKKQIREPVD REPVDLQKKKKRKQRS K K Q Q K K 0 1 0 1 0 2 1 0 0 1 1 2 0 0 1 0 0 0 0 1 0 11 2 1352.7776 Q9UQR1;F5H173 Q9UQR1 132 142 ZNF148 Zinc finger protein 148 yes no 3 0.00020756 100.88 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 48816000 5961600 7640700 7863700 5557800 9071300 12721000 3962 1626 4008 17778;17779;17780;17781;17782;17783;17784 11824;11825;11826;11827;11828 11826 5 KQISNLQQSISDAEQR RSEIDNVKKQISNLQQ SISDAEQRGENALKDA K K Q Q R G 1 1 1 1 0 4 1 0 0 2 1 1 0 0 0 3 0 0 0 0 0 16 1 1843.9388 P04264;CON__P04264 P04264 417 432 KRT1 Keratin, type II cytoskeletal 1 yes no 3 0.0016348 63.546 By matching By MS/MS By matching By matching By matching By matching 1 1 2129200 0 1973700 0 0 155470 0 + 3963 789 4009 17785;17786 11829 11829 1 KQLECEQVLQK PYAEQLERKQLECEQV ECEQVLQKLAKEIGST R K Q Q K L 0 0 0 0 1 3 2 0 0 0 2 2 0 0 0 0 0 0 0 1 0 11 1 1401.7286 Q8IZ69-2;Q8IZ69;F2Z2W7;F8WB35 Q8IZ69-2 187 197 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A yes no 3 3.0245E-08 110.08 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 5667800 956600 1185200 0 550360 848600 2127100 3964 478 4010 17787;17788;17789;17790;17791 11830;11831;11832;11833 11830 4 KQLEDWLHSK LLGYFPNKKQLEDWLH LEDWLHSKSKEINQTR K K Q S K S 0 0 0 1 0 1 1 0 1 0 2 2 0 0 0 1 0 1 0 0 0 10 1 1282.667 Q92878-2;Q92878;Q92878-3;E7EN38;H7C0P8 Q92878-2 580 589 RAD50 DNA repair protein RAD50 yes no 3 4.3458E-35 133.75 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 11922000 0 1460000 2387500 1102000 3069100 3903800 3965 1362 4011 17792;17793;17794;17795;17796 11834 11834 1 KQLQAIEFNK GVEFKLSKKQLQAIEF LQAIEFNKALLAMYTN K K Q N K A 1 0 1 0 0 2 1 0 0 1 1 2 0 1 0 0 0 0 0 0 0 10 1 1217.6768 G5E9Z8;H0YH39;O76094 G5E9Z8 240 249 SRP72 Signal recognition particle subunit SRP72 yes no 3 0.01838 55.084 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 3361400 401910 0 305610 0 1158400 1495500 3966 600 4012 17797;17798;17799;17800 11835 11835 1 KQNADPQAVTMPATETKK KSLAADTKKQNADPQA MPATETKKVSHVADTK K K Q K K V 3 0 1 1 0 2 1 0 0 0 0 3 1 0 2 0 3 0 0 1 0 18 2 1956.9939 Q9UNF1;Q9UNF1-2;H7BXW3;Q5H907;Q5H909 Q9UNF1 108 125 MAGED2 Melanoma-associated antigen D2 yes no 3 0.012507 48.371 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 4281900 0 1071400 1939000 0 0 1271600 3967 1614 4013 17801;17802;17803 11836;11837 11836 2 KQNIQEHLGFLQK FESFITEKKQNIQEHL EHLGFLQKLYAAMHEP K K Q Q K L 0 0 1 0 0 3 1 1 1 1 2 2 0 1 0 0 0 0 0 0 0 13 1 1581.8627 Q13535-2;Q13535-3;Q13535 Q13535-2 1602 1614 ATR Serine/threonine-protein kinase ATR yes no 3 0.013656 45.891 By matching By matching By matching By matching By matching By MS/MS 1 1 2610800 0 432030 0 0 0 2178700 3968 1085 4014 17804;17805 11838 11838 1 KQNNFSLAMK MKMIDSARKQNNFSLA NNFSLAMKLLKELHKE R K Q M K L 1 0 2 0 0 1 0 0 0 0 1 2 1 1 0 1 0 0 0 0 0 10 1 1179.607 P78527;E7EUY0;P78527-2 P78527 3248 3257 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.0051538 104.82 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 12107000 0 901970 1485100 0 2844400 6875500 3969 1012 4015 17806;17807;17808;17809 11839 11839 1 KQPSLPLSEDAHPSVAK EIIEDCMKKQPSLPLS DAHPSVAKINFVMCEV K K Q A K I 2 0 0 1 0 1 1 0 1 0 2 2 0 0 3 3 0 0 0 1 0 17 1 1802.9527 G3V274;Q9UL15;Q9UL15-2 G3V274 169 185 BAG5 BAG family molecular chaperone regulator 5 yes no 3 0.0012986 77.027 By matching By matching By matching By matching By matching By MS/MS 1 1 1952600 0 560490 0 0 0 1392100 3970 580 4016 17810;17811 11840 11840 1 KQQASASTDGVDKLSGK ELRDRLPKKQQASAST GVDKLSGKEQSFTSLE K K Q G K E 2 0 0 2 0 2 0 2 0 0 1 3 0 0 0 3 1 0 0 1 0 17 2 1718.8799 F8WDE0;P46100-6;P46100-2;P46100-5;P46100-3;P46100-4;P46100 F8WDE0 838 854 ATRX Transcriptional regulator ATRX yes no 3 0.00089748 83.751 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 3980400 801970 799400 784210 354240 405740 834790 3971 569 4017 17812;17813;17814;17815;17816;17817 11841;11842 11842 2 KQQLLATAAHK LAKGRASKKQQLLATA LLATAAHKDSQSIARF K K Q H K D 3 0 0 0 0 2 0 0 1 0 2 2 0 0 0 0 1 0 0 0 0 11 1 1207.7037 O94762;B7Z8Y7 O94762 749 759 RECQL5 ATP-dependent DNA helicase Q5 yes no 3 0.025878 45.661 By matching By MS/MS By matching By matching By matching By matching 1 1 1130900 0 653960 476900 0 0 0 3972 197 4018 17818;17819 11843 11843 1 KQQLLATAAHKDSQSIAR LAKGRASKKQQLLATA KDSQSIARFFCRRVES K K Q A R F 4 1 0 1 0 3 0 0 1 1 2 2 0 0 0 2 1 0 0 0 0 18 2 1965.0756 O94762;B7Z8Y7 O94762 749 766 RECQL5 ATP-dependent DNA helicase Q5 yes no 4 0.0013719 59.252 By matching By matching By MS/MS By matching By matching By matching 1 1 2318700 0 0 1426500 0 892150 0 3973 197 4019 17820;17821 11844 11844 1 KQQNQELQEQLR AKTHYDAKKQQNQELQ QELQEQLRSLEQLQKE K K Q L R S 0 1 1 0 0 5 2 0 0 0 2 1 0 0 0 0 0 0 0 0 0 12 1 1540.7958 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9;H0YH75 Q14980-2 1611 1622 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.00093717 87.641 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 9913500 0 1970700 0 880360 2587800 4474600 3974 1121 4020 17822;17823;17824;17825 11845;11846;11847;11848 11848 4 KQRLNLVSSSSDGTCVAAR DAEEQLHKKQRLNLVS DGTCVAARTRPVLSCK K K Q A R T 2 2 1 1 1 1 0 1 0 0 2 1 0 0 0 4 1 0 0 2 0 19 2 2048.0433 I3L4J3;Q7Z3B3;C9JHY2 I3L4J3 574 592 KANSL1 KAT8 regulatory NSL complex subunit 1 yes no 4 0.0059376 44.391 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 3914500 0 1529400 1047800 590400 746950 0 3975 247 4021 17826;17827;17828;17829 11849 11849 1 KQRPLTASLQCNSTAQTEK FEEQNVRKKQRPLTAS NSTAQTEKVSVIQDFV K K Q E K V 2 1 1 0 1 3 1 0 0 0 2 2 0 0 1 2 3 0 0 0 0 19 2 2160.0957 Q9UFW8;C9JUJ0 Q9UFW8 82 100 CGGBP1 CGG triplet repeat-binding protein 1 yes no 4 0.00037216 66.977 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 11232000 0 1353700 2335100 1305400 2628700 3609400 3976 1588 4022 17830;17831;17832;17833;17834 11850;11851;11852 11851 2 KQSLPATSIPTPASFK CAACQNPRKQSLPATS IPTPASFKFGTSETSK R K Q F K F 2 0 0 0 0 1 0 0 0 1 1 2 0 1 3 3 2 0 0 0 0 16 1 1671.9196 P49792 P49792 1507 1522 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 3 0.00091243 77.324 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 16777000 11742000 5035100 0 0 0 0 3977 945 4023 17835;17836 11853;11854 11853 2 KQTDFEHRIPK FQPVAELKKQTDFEHR DFEHRIPKEQWWLKLR K K Q P K E 0 1 0 1 0 1 1 0 1 1 0 2 0 1 1 0 1 0 0 0 0 11 2 1397.7415 Q01813;H0Y3P8;Q5VSR7;B1APP8 Q01813 737 747 PFKP 6-phosphofructokinase type C yes no 3 0.019404 70.412 By matching By matching By matching By matching By matching By MS/MS 1 1629000 0 0 0 0 0 1629000 3978 1031 4024 17837 11855 11855 1 KQTETEMLYGSAPR QERQLKNKKQTETEML MLYGSAPRTPSKRRGL K K Q P R T 1 1 0 0 0 1 2 1 0 0 1 1 1 0 1 1 2 0 1 0 0 14 1 1609.777 H9KV59;O43663;O43663-2;H0YL53;G3V3N7 H9KV59 456 469 PRC1 Protein regulator of cytokinesis 1 no no 3 0.0016175 60.657 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 31806000 1738200 4948600 3959900 1794400 4066300 15299000 3979 676 4025 17838;17839;17840;17841;17842;17843 11856;11857 11856 2 KQTETEMLYGSAPRTPSK QERQLKNKKQTETEML SAPRTPSKRRGLAPNT K K Q S K R 1 1 0 0 0 1 2 1 0 0 1 2 1 0 2 2 3 0 1 0 0 18 2 2023.0044 H9KV59;O43663;O43663-2;H0YL53;G3V3N7 H9KV59 456 473 PRC1 Protein regulator of cytokinesis 1 no no 3;4 9.1643E-32 108.96 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 73638000 4612000 10650000 16154000 11598000 13463000 17161000 3980 676 4026 17844;17845;17846;17847;17848;17849;17850;17851;17852;17853;17854 11858;11859;11860;11861;11862;11863;11864;11865;11866;11867;11868 11858 11 KQTGSGPLGNSYVER CKKSRKEKKQTGSGPL LGNSYVERQRSVHEKN K K Q E R Q 0 1 1 0 0 1 1 3 0 0 1 1 0 0 1 2 1 0 1 1 0 15 1 1591.7954 F5H082;Q9UER7;Q9UER7-2 F5H082 562 576 DAXX Death domain-associated protein 6 yes no 3 0.0017781 56.774 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 19748000 966320 1949600 1733400 1262500 1885400 11951000 3981 503 4027 17855;17856;17857;17858;17859;17860 11869;11870;11871 11870 3 KQTTLAFKPIK REPGTKTKKQTTLAFK TLAFKPIKKGKKRNPW K K Q I K K 1 0 0 0 0 1 0 0 0 1 1 3 0 1 1 0 2 0 0 0 0 11 2 1273.7758 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5 P11388 1276 1286 TOP2A DNA topoisomerase 2-alpha yes no 2;3 3.1337E-12 114.71 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 2 1 1 2 2 30039000 1939400 5690300 4011400 1718600 3173000 13506000 3982 655 4028 17861;17862;17863;17864;17865;17866;17867;17868;17869 11872;11873;11874;11875 11874 3 KQVCGDSIKPEETEQEVAADETR EAKDGPPKKQVCGDSI EVAADETRNLPHSKQG K K Q T R N 2 1 0 2 1 2 5 1 0 1 0 2 0 0 1 1 2 0 0 2 0 23 2 2618.213 Q96GM8;B4DEM6 Q96GM8 368 390 TOE1 Target of EGR1 protein 1 yes no 3;4 2.6967E-08 66.041 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 2 2 1 54910000 10500000 22930000 17547000 3933700 0 0 3983 1389 4029 17870;17871;17872;17873;17874;17875 11876;11877;11878;11879;11880;11881;11882 11879 6 KQVEVLAENIQDTK STSVLRYKKQVEVLAE AENIQDTKSQPNTMTS K K Q T K S 1 0 1 1 0 2 2 0 0 1 1 2 0 0 0 0 1 0 0 2 0 14 1 1613.8625 Q96QE3;Q96QE3-2 Q96QE3 163 176 ATAD5 ATPase family AAA domain-containing protein 5 yes no 3 0.00070042 80.719 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 10426000 0 4025800 6400300 0 0 0 3984 1415 4030 17876;17877 11883;11884 11884 2 KQVSSHLQVLAR RTGKTRTRKQVSSHLQ SHLQVLARRKSREIQS R K Q A R R 1 1 0 0 0 2 0 0 1 0 2 1 0 0 0 2 0 0 0 2 0 12 1 1364.7888 H0Y3A6 H0Y3A6 104 115 yes yes 3 0.0012493 74.698 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 19469000 4288100 2036200 1568600 1778900 3955500 5841700 3985 606 4031 17878;17879;17880;17881;17882;17883;17884 11885;11886;11887;11888;11889;11890;11891 11891 7 KQWDSVVLER NRQFTLAKKQWDSVVL WDSVVLERIEQACDPA K K Q E R I 0 1 0 1 0 1 1 0 0 0 1 1 0 0 0 1 0 1 0 2 0 10 1 1258.667 Q9BRX2 Q9BRX2 115 124 PELO Protein pelota homolog yes yes 3 0.00053827 104.82 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 20895000 2305700 3482600 4301000 1578800 2669200 6558200 3986 1443 4032 17885;17886;17887;17888;17889;17890 11892;11893;11894 11892 3 KRAFQLEEGEETEPDCK NLSLRKAKKRAFQLEE EETEPDCKYSKKHWKS K K R C K Y 1 1 0 1 1 1 5 1 0 0 1 2 0 1 1 0 1 0 0 0 0 17 2 2064.9422 P38432 P38432 111 127 COIL Coilin yes yes 3 0.0075246 67.685 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 8825400 0 1435000 2189700 1394000 1743000 2063700 3987 904 4033 17891;17892;17893;17894;17895 11895;11896;11897;11898;11899 11899 5 KRGAPPSSNIEDFHGLLPK QERSLFEKKRGAPPSS DFHGLLPKGYPHLCSI K K R P K G 1 1 1 1 0 0 1 2 1 1 2 2 0 1 3 2 0 0 0 0 0 19 2 2062.096 P43243;A8MXP9;D6REM6;D6R991;H0Y8T4 P43243 269 287 MATR3 Matrin-3 yes no 4;5 0.00034726 74.338 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 2 1 25762000 0 3431400 8065300 12500000 1766000 0 3988 52 4034 17896;17897;17898;17899;17900 11900;11901;11902;11903 11903 4 KRPEPSSDYDLSPAK KVTVRRFRKRPEPSSD DYDLSPAKQEPKPFDR R K R A K Q 1 1 0 2 0 0 1 0 0 0 1 2 0 0 3 3 0 0 1 0 0 15 2 1688.837 Q6W2J9;Q6W2J9-4;Q6W2J9-2;A6NE70;H7C2V9;H7C231;H7BZ37 Q6W2J9 1399 1413 BCOR BCL-6 corepressor yes no 3 0.0017137 72.898 By matching By matching By matching By matching By matching By MS/MS 1 659570 0 0 0 0 0 659570 3989 1237 4035 17901 11904 11904 1 KRTVTAAGAENIQQK NISSDRGKKRTVTAAG GAENIQQKTDEKVDES K K R Q K T 3 1 1 0 0 2 1 1 0 1 0 2 0 0 0 0 2 0 0 1 0 15 2 1613.8849 Q29RF7 Q29RF7 1238 1252 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 3;4 0.0011944 77.13 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 25252000 2094500 4441300 6443300 2973800 3759700 5539500 3990 1159 4036 17902;17903;17904;17905;17906;17907;17908;17909;17910;17911;17912 11905;11906;11907;11908;11909;11910;11911 11909 7 KSAEFLLHMLK WTQGRWPKKSAEFLLH EFLLHMLKNAESNAEL K K S L K N 1 0 0 0 0 0 1 0 1 0 3 2 1 1 0 1 0 0 0 0 0 11 1 1315.7322 P18621;B4E3C2 P18621 86 96 RPL17 60S ribosomal protein L17 yes no 3 2.2086E-55 139.31 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 23857000 0 0 0 13348000 10509000 0 3991 855 4037 17913;17914 11912;11913 11913 2 KSCCSCCPVGCAK ECKCTSCKKSCCSCCP CCPVGCAKCAHGCVCK K K S A K C 1 0 0 0 5 0 0 1 0 0 0 2 0 0 1 2 0 0 0 1 0 13 1 1572.5975 Q8N339;P80297;P13640-2;P04732;P02795;CON__P67983;P13640 Q8N339 31 43 MT1M;MT1X;MT1G;MT1E;MT2A Metallothionein-1M;Metallothionein-1X;Metallothionein-1G;Metallothionein-1E;Metallothionein-2 yes no 3 0.030093 38.3 By matching By matching By MS/MS By matching By matching By matching 1 1 894700 0 266650 628050 0 0 0 + 3992 303 4038 17915;17916 11914 11914 1 KSCVEEPEPEPEAAEGDGDK SGYQSSQKKSCVEEPE AAEGDGDKKGNAEGSS K K S D K K 2 0 0 2 1 0 6 2 0 0 0 2 0 0 3 1 0 0 0 1 0 20 1 2171.9165 P51858;A8K8G0;Q5SZ08;Q5SZ07;B7Z525 P51858 106 125 HDGF Hepatoma-derived growth factor yes no 3 8.1081E-05 65.184 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 13700000 1618700 1479100 2858100 2509700 3262500 1971400 3993 954 4039 17917;17918;17919;17920;17921;17922 11915;11916;11917;11918;11919 11919 5 KSDGACDSPSSDKENSSQIAQDHQK VDEEATEKKSDGACDS QIAQDHQKKETVVKED K K S Q K K 2 0 1 4 1 3 1 1 1 1 0 3 0 0 1 6 0 0 0 0 0 25 2 2718.1787 Q9UIG0-2;Q9UIG0 Q9UIG0-2 151 175 BAZ1B Tyrosine-protein kinase BAZ1B yes no 4 0.0028811 48.51 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 9722300 1330900 1640900 2454300 1322100 1269500 1704600 3994 1596 4040 17923;17924;17925;17926;17927;17928 11920;11921;11922;11923;11924 11923 5 KSEIEYYAMLAK ANNCPALRKSEIEYYA EYYAMLAKTGVHHYSG R K S A K T 2 0 0 0 0 0 2 0 0 1 1 2 1 0 0 1 0 0 2 0 0 12 1 1444.7272 E5RI99;P62888 E5RI99 57 68 RPL30 60S ribosomal protein L30 yes no 2;3 1.3658E-79 144.28 By MS/MS By matching By matching By MS/MS By MS/MS By matching 3 1 1 64015000 37520000 0 0 18757000 7737900 0 3995 342 4041;4042 17929;17930;17931;17932;17933 11925;11926;11927;11928;11929 11927 31 4 KSEKPLENGTGFQAQDISGQK SEPGNQEKKSEKPLEN AQDISGQKNGRGVIFG K K S Q K N 1 0 1 1 0 3 2 3 0 1 1 3 0 1 1 2 1 0 0 0 0 21 2 2261.1288 P49792;E9PGT0 P49792 1911 1931 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 3;4 1.2801E-22 96.379 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 50970000 9275300 8648200 11674000 5110700 6684400 9578000 3996 945 4043 17934;17935;17936;17937;17938;17939;17940;17941;17942;17943;17944;17945 11930;11931;11932;11933;11934;11935;11936;11937;11938;11939;11940;11941;11942;11943;11944;11945 11933 16 KSFDANGASTLSKLPTPTSSVPAQK LQSDHQPKKSFDANGA TSSVPAQKTERKESTS K K S Q K T 3 0 1 1 0 1 0 1 0 0 2 3 0 1 3 5 3 0 0 1 0 25 2 2531.3231 Q9BTA9-2;Q9BTA9;B4DMH1;Q9BTA9-3 Q9BTA9-2 233 257 WAC WW domain-containing adapter protein with coiled-coil yes no 4 1.5817E-15 77.657 By matching By MS/MS By matching By matching By matching By matching 1 6631900 0 6631900 0 0 0 0 3997 1446 4044 17946 11946 11946 1 KSGGATIEELTEK TIEEKVAKKSGGATIE TIEELTEKCKQIAQSK K K S E K C 1 0 0 0 0 0 3 2 0 1 1 2 0 0 0 1 2 0 0 0 0 13 1 1361.7038 P18583-2;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;H7C2G8;H7C1M2 P18583-2 1777 1789 SON Protein SON yes no 3 0.0015517 64.244 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 4812500 792980 868830 767230 1053500 340820 989210 3998 854 4045 17947;17948;17949;17950;17951;17952 11947;11948;11949;11950 11948 4 KSIDKDEEFAGSSPQSSK SRKYVKAKKSIDKDEE GSSPQSSKSTVVKSLI K K S S K S 1 0 0 2 0 1 2 1 0 1 0 3 0 1 1 5 0 0 0 0 0 18 2 1938.9171 Q9Y2M0-2;Q9Y2M0;H3BQ24 Q9Y2M0-2 168 185 FAN1 Fanconi-associated nuclease 1 yes no 4 0.0015679 55.912 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 3093500 764090 0 871960 710170 747300 0 3999 1634 4046 17953;17954;17955;17956 11951 11951 1 KSIDSFGQVSHPK TCDVETLKKSIDSFGQ FGQVSHPKNSYSTRSR K K S P K N 0 0 0 1 0 1 0 1 1 1 0 2 0 1 1 3 0 0 0 1 0 13 1 1428.7361 Q86XZ4;H7BYM7 Q86XZ4 363 375 SPATS2 Spermatogenesis-associated serine-rich protein 2 yes no 3 0.0040663 57.794 By matching By matching By MS/MS By matching By matching By matching 1 1 1 2431300 0 705090 500340 0 0 1225900 4000 659 4047 17957;17958;17959 11952 11952 1 KSLESINSRLQLVMK MVAAKKTKKSLESINS SRLQLVMKSGKYVLGY K K S M K S 0 1 1 0 0 1 1 0 0 1 3 2 1 0 0 3 0 0 0 1 0 15 2 1744.9869 E5RI99;P62888;E5RJH3 E5RI99 9 23 RPL30 60S ribosomal protein L30 yes no 2;3;4 1.5079E-200 172.58 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 7 3 7 5 3 3332500000 735070000 306350000 181530000 1750200000 187820000 171520000 4001 342 4048;4049 17960;17961;17962;17963;17964;17965;17966;17967;17968;17969;17970;17971;17972;17973;17974;17975;17976;17977;17978;17979;17980;17981;17982;17983;17984;17985;17986;17987;17988 11953;11954;11955;11956;11957;11958;11959;11960;11961;11962;11963;11964;11965;11966;11967;11968;11969 11961 32 17 KSLPVPGALEQVASR LGSPSLPKKSLPVPGA ALEQVASRLSSKVAAE K K S S R L 2 1 0 0 0 1 1 1 0 0 2 1 0 0 2 2 0 0 0 2 0 15 1 1550.878 B7ZM82;B3KVH1 B7ZM82 11 25 WIZ yes no 3 0.0028069 52.52 By matching By MS/MS By matching By matching By matching By matching 1 10384000 0 10384000 0 0 0 0 4002 212 4050 17989 11970 11970 1 KSMVKGLDSYEEK PQDYARFKKSMVKGLD GLDSYEEKEDKVIKEM K K S E K E 0 0 0 1 0 0 2 1 0 0 1 3 1 0 0 2 0 0 1 1 0 13 2 1512.7494 Q86UT8;E9PJ16 Q86UT8 131 143 CCDC84 Coiled-coil domain-containing protein 84 yes no 3 0.0069708 66.708 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 12982000 1536500 2474000 2819000 1468500 1479300 3205000 4003 1263 4051 17990;17991;17992;17993;17994;17995 11971;11972;11973 11973 3 KSPDSDVAATLK IDRLYDWKKSPDSDVA SDVAATLKKQKKNTKD K K S L K K 2 0 0 2 0 0 0 0 0 0 1 2 0 0 1 2 1 0 0 1 0 12 1 1230.6456 O60841 O60841 766 777 EIF5B Eukaryotic translation initiation factor 5B yes yes 2;3 0.0222 46.985 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2 3187300 0 0 0 506230 1413000 1268100 4004 734 4052 17996;17997;17998;17999 11974;11975 11974 1 KSPDSDVAATLKK IDRLYDWKKSPDSDVA DVAATLKKQKKNTKDE K K S K K Q 2 0 0 2 0 0 0 0 0 0 1 3 0 0 1 2 1 0 0 1 0 13 2 1358.7405 O60841 O60841 766 778 EIF5B Eukaryotic translation initiation factor 5B yes yes 3 5.0161E-05 98.582 By matching By matching By matching By matching By MS/MS By matching 1 1811700 0 0 0 0 1811700 0 4005 734 4053 18000 11976 11976 1 KSPEGLISR YLRIPGSKKSPEGLIS SPEGLISRTGSSSLPG K K S S R T 0 1 0 0 0 0 1 1 0 1 1 1 0 0 1 2 0 0 0 0 0 9 1 985.55564 Q9P275;Q9P275-2;E9PEW0;F5H3B9 Q9P275 428 436 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.00023969 112.85 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 14836000 2114000 1280800 1736400 1035700 3287400 5381700 4006 1576 4054 18001;18002;18003;18004;18005;18006 11977 11977 1 KSPGVAAAVAEDGGLK ________________ VAEDGGLKKCKISSYC R K S L K K 4 0 0 1 0 0 1 3 0 0 1 2 0 0 1 1 0 0 0 2 0 16 1 1468.7886 E9PQV9;Q9BTE7;E9PLH8;E9PM78;H0YD80;E9PLS2;E9PM04 E9PQV9 8 23 DCUN1D5 DCN1-like protein 5 yes no 3 0.0036966 47 By matching By matching By matching By matching By matching By MS/MS 1 1 1146700 0 0 0 253070 0 893640 4007 468 4055 18007;18008 11978 11978 1 KSPLAMSHASGVK LSGEKKNKKSPLAMSH MSHASGVKTSPDPRQG K K S V K T 2 0 0 0 0 0 0 1 1 0 1 2 1 0 1 3 0 0 0 1 0 13 1 1311.6969 Q1ED39 Q1ED39 118 130 KNOP1 Lysine-rich nucleolar protein 1 yes yes 3 0.0014538 64.52 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 19014000 2819100 0 4117600 1996500 4313800 5767000 4008 1157 4056 18009;18010;18011;18012;18013 11979;11980 11980 2 KSPLAQDSPSQGSPALYR QQNIKNARKSPLAQDS QGSPALYRNVNTLRER R K S Y R N 2 1 0 1 0 2 0 1 0 0 2 1 0 0 3 4 0 0 1 0 0 18 1 1900.9643 Q69YH5;E9PEI0 Q69YH5 119 136 CDCA2 Cell division cycle-associated protein 2 yes no 3 0.00477 42.633 By matching By matching By matching By matching By matching By MS/MS 1 2515100 0 0 0 0 0 2515100 4009 1219 4057 18014 11981 11981 1 KSPMLCGQYPVKSEGK NQKGTGVKKSPMLCGQ YPVKSEGKELKIVVQP K K S G K E 0 0 0 0 1 1 1 2 0 0 1 3 1 0 2 2 0 0 1 1 0 16 2 1807.8961 O94916-2;O94916-3;O94916;O94916-4;E9PHR7 O94916-2 189 204 NFAT5 Nuclear factor of activated T-cells 5 yes no 3 0.016394 49.595 By MS/MS By matching By matching By matching By matching By matching 1 807150 807150 0 0 0 0 0 4010 440 4058 18015 11982 11982 1 KSPVGKSPPSTGSTYGSSQK SGSLSPSKKSPVGKSP STYGSSQKEESAASGG K K S Q K E 0 0 0 0 0 1 0 3 0 0 0 3 0 0 3 6 2 0 1 1 0 20 2 1978.996 Q9Y2W1 Q9Y2W1 314 333 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3;4 0.011207 47.082 By MS/MS By matching By MS/MS By matching By MS/MS By matching 2 1 2 1 2 2 15746000 2420100 1951200 4085300 1765400 3134600 2389100 4011 1639 4059 18016;18017;18018;18019;18020;18021;18022;18023;18024;18025 11983;11984;11985;11986 11984 4 KSQDFGNLFSFPSYSQK PEKSLHDKKSQDFGNL SFPSYSQKSEDDSAKF K K S Q K S 0 0 1 1 0 2 0 1 0 0 1 2 0 3 1 4 0 0 1 0 0 17 1 1978.9425 Q02880-2;Q02880;B4DLV2 Q02880-2 1435 1451 TOP2B DNA topoisomerase 2-beta yes no 3 0.00022571 75.564 By matching By matching By matching By matching By matching By MS/MS 1 146250000 0 0 0 0 0 146250000 4012 1035 4060 18026 11987 11987 0 KSQEIPQQMNGSDCGMFACK NGWQLFSKKSQEIPQQ DCGMFACKYADCITKD K K S C K Y 1 0 1 1 2 3 1 2 0 1 0 2 2 1 1 2 0 0 0 0 0 20 1 2314.9803 Q9P0U3 Q9P0U3 590 609 SENP1 Sentrin-specific protease 1 yes yes 3 0.030394 29.842 By MS/MS By matching By matching By matching By matching By matching 1 676320 676320 0 0 0 0 0 4013 1573 4061 18027 11988 11988 1 KSSTLTSSRLATGEEEGGGSSSK FRSPHLWKKSSTLTSS EGGGSSSKRFLRSCSA K K S S K R 1 1 0 0 0 0 3 4 0 0 2 2 0 0 0 7 3 0 0 0 0 23 2 2255.0877 H7C1H8;P00519;P00519-2 H7C1H8 504 526 ABL1 Tyrosine-protein kinase ABL1 yes no 4 0.0079709 44.963 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 6326500 866200 1321000 2267600 1041300 0 830380 4014 666 4062 18028;18029;18030;18031;18032 11989;11990;11991;11992;11993 11993 3 KSTLASVNIQALPDKGQK LTTQLKQKKSTLASVN ALPDKGQKLIKQIQEL K K S Q K L 2 0 1 1 0 2 0 1 0 1 2 3 0 0 1 2 1 0 0 1 0 18 2 1897.0633 Q9UNY4;Q9UNY4-2 Q9UNY4 425 442 TTF2 Transcription termination factor 2 yes no 3 0.021395 44.998 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 4226400 814160 0 955950 764700 542140 1149500 4015 1618 4063 18033;18034;18035;18036;18037 11994 11994 1 KSVAEGLSGSLVQEPFQLATEK PFVPKKEKKSVAEGLS PFQLATEKRAKERQEL K K S E K R 2 0 0 0 0 2 3 2 0 0 3 2 0 1 1 3 1 0 0 2 0 22 1 2317.2165 Q9ULW0;Q96RR5 Q9ULW0 645 666 TPX2;HCA90 Targeting protein for Xklp2 yes no 3 0.024793 29.855 By matching By matching By matching By MS/MS By matching By matching 1 2403300 0 0 0 2403300 0 0 4016 1611 4064 18038 11995 11995 1 KSVESTCLCFAR QRLTHQDKKSVESTCL STCLCFARLVDNFQHE K K S A R L 1 1 0 0 2 0 1 0 0 0 1 1 0 1 0 2 1 0 0 1 0 12 1 1456.6803 Q14CA3;Q14669;Q14CF1 Q14CA3 665 676 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 3 0.0022175 65.234 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 1 1 7442500 0 4531400 1329500 362840 0 1218800 4017 1122 4065 18039;18040;18041;18042;18043 11996;11997 11997 2 KSVPGVCGASQTHQKPQNGEK GLDFFGNKKSVPGVCG QKPQNGEKKEESLTER K K S E K K 1 0 1 0 1 3 1 3 1 0 0 3 0 0 2 2 1 0 0 2 0 21 2 2236.1019 Q9Y2R4;F5H5G9;F5H0R7 Q9Y2R4 53 73 DDX52 Probable ATP-dependent RNA helicase DDX52 yes no 4 1.4659E-05 71.434 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 20742000 2763100 0 3802300 4296100 3923100 5957700 4018 1635 4066 18044;18045;18046;18047;18048 11998;11999;12000;12001;12002 12002 5 KSYDDAESLK KIVGLQYKKSYDDAES YDDAESLKTLRYGKIM K K S L K T 1 0 0 2 0 0 1 0 0 0 1 2 0 0 0 2 0 0 1 0 0 10 1 1154.5455 Q02880-2;Q02880;E9PCY5 Q02880-2 536 545 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 2 0.016235 89.561 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3578400 378110 474880 0 0 0 2725400 4019 1035 4067 18049;18050;18051 12003 12003 1 KSYDDAESLKTLR KIVGLQYKKSYDDAES AESLKTLRYGKIMIMT K K S L R Y 1 1 0 2 0 0 1 0 0 0 2 2 0 0 0 2 1 0 1 0 0 13 2 1524.7784 Q02880-2;Q02880;E9PCY5 Q02880-2 536 548 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 3 0.014089 62.035 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4026300 0 0 550960 0 1329400 2146000 4020 1035 4068 18052;18053;18054 12004 12004 1 KTAEAGGVTGKGQDGIGSK WDDQQKVKKTAEAGGV GQDGIGSKAEKTLGDF K K T S K A 2 0 0 1 0 1 1 6 0 1 0 3 0 0 0 1 2 0 0 1 0 19 2 1759.9064 P09874;F8WC10 P09874 87 105 PARP1 Poly [ADP-ribose] polymerase 1 yes no 3;4 0.00029324 69.361 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 2 2 30679000 3878800 3266300 5976100 3961700 5563800 8032200 4021 815 4069 18055;18056;18057;18058;18059;18060;18061;18062;18063;18064;18065;18066;18067 12005;12006;12007;12008;12009;12010;12011;12012 12010 8 KTAEEEELAEEK EQEEVNEKKTAEEEEL EEELAEEKKKALNVVQ K K T E K K 2 0 0 0 0 0 6 0 0 0 1 2 0 0 0 0 1 0 0 0 0 12 1 1404.662 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;Q76FK4-3 F5H101 901 912 NOL8 Nucleolar protein 8 yes no 3 4.1221E-05 97.779 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 3576300 2662800 0 0 913480 0 0 4022 27 4070 18068;18069 12013;12014 12013 1 KTAEEEELAEEKK EQEEVNEKKTAEEEEL EELAEEKKKALNVVQS K K T K K K 2 0 0 0 0 0 6 0 0 0 1 3 0 0 0 0 1 0 0 0 0 13 2 1532.757 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;Q76FK4-3 F5H101 901 913 NOL8 Nucleolar protein 8 yes no 3 4.6E-46 127.3 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 22964000 4066700 3508600 6969800 2815700 0 5602900 4023 27 4071 18070;18071;18072;18073;18074 12015;12016;12017 12016 3 KTEDEHFEFHSRPCPTK IQERESKKKTEDEHFE HSRPCPTKILEDVVGV K K T T K I 0 1 0 1 1 0 3 0 2 0 0 2 0 2 2 1 2 0 0 0 0 17 2 2143.9745 Q9ULW0;Q96RR5 Q9ULW0 449 465 TPX2;HCA90 Targeting protein for Xklp2 yes no 4;5 0.0033086 64.327 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 2 2 1 60670000 0 5772900 21673000 8304500 13839000 11081000 4024 1611 4072 18075;18076;18077;18078;18079;18080;18081;18082 12018;12019;12020;12021 12020 3 KTEELEEESFPER PPGKEKQRKTEELEEE EEESFPERSKKEDRGK R K T E R S 0 1 0 0 0 0 6 0 0 0 1 1 0 1 1 1 1 0 0 0 0 13 1 1621.7471 Q9Y2W1 Q9Y2W1 486 498 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.032951 58.268 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 7055700 1407400 0 1693300 0 1027100 2928000 4025 1639 4073 18083;18084;18085;18086 12022;12023 12022 1 KTEELEEESFPERSK PPGKEKQRKTEELEEE ESFPERSKKEDRGKRS R K T S K K 0 1 0 0 0 0 6 0 0 0 1 2 0 1 1 2 1 0 0 0 0 15 2 1836.8741 Q9Y2W1 Q9Y2W1 486 500 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.0078575 61.186 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 4867600 347550 685620 0 1145600 1295900 1393000 4026 1639 4074 18087;18088;18089;18090;18091 12024;12025 12024 2 KTEILDPDTLENQATVEFHSGDK KCCAEEDKKTEILDPD VEFHSGDKTMECEKLG K K T D K T 1 0 1 3 0 1 3 1 1 1 2 2 0 1 1 1 3 0 0 1 0 23 1 2586.2449 Q92576-2;Q92576;E7EVH3;E9PE34;B3KP41;E7ER40 Q92576-2 688 710 PHF3 PHD finger protein 3 yes no 3;4 9.3049E-22 94.359 By matching By matching By matching By MS/MS By matching By matching 1 2 57796000 0 21055000 0 36742000 0 0 4027 1353 4075 18092;18093;18094 12026;12027 12026 2 KTEVLMENFRR EVYSTEIKKTEVLMEN VLMENFRRAIGLRIKE K K T R R A 0 2 1 0 0 0 2 0 0 0 1 1 1 1 0 0 1 0 0 1 0 11 2 1421.7449 Q9Y265;Q9Y265-2;E7ETR0 Q9Y265 108 118 RUVBL1 RuvB-like 1 yes no 3 0.03457 63.624 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 10303000 0 0 848770 543590 3173700 5737400 4028 1629 4076 18095;18096;18097;18098 12028 12028 1 KTGSPEIKLK VPQTVIPKKTGSPEIK GSPEIKLKITKTIQNG K K T L K I 0 0 0 0 0 0 1 1 0 1 1 3 0 0 1 1 1 0 0 0 0 10 2 1099.6601 Q9BZ95-4;C9JY66;Q9BZ95-2;B7ZL11;Q9BZ95;Q9BZ95-3;E9PKA2 Q9BZ95-4 84 93 WHSC1L1 Histone-lysine N-methyltransferase NSD3 yes no 2 6.3904E-14 121.5 By matching By matching By matching By MS/MS By matching By matching 1 1 6439900000 0 0 0 6438100000 0 1819400 4029 210 4077 18099;18100 12029 12029 1 KTHQPSDEVGTSIEHPR VPCAPMPKKTHQPSDE GTSIEHPREAEEVMDA K K T P R E 0 1 0 1 0 1 2 1 2 1 0 1 0 0 2 2 2 0 0 1 0 17 1 1916.9341 Q99575 Q99575 751 767 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 4 9.8308E-09 94.569 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 5772400 765760 2014000 976180 0 2016400 0 4030 1428 4078 18101;18102;18103;18104 12030;12031;12032;12033;12034;12035 12032 6 KTKPYIQVDIGGGQTK LPFKVVEKKTKPYIQV DIGGGQTKTFAPEEIS K K T T K T 0 0 0 1 0 2 0 3 0 2 0 3 0 0 1 0 2 0 1 1 0 16 2 1731.9519 P11021;B4DEF7 P11021 123 138 HSPA5 78 kDa glucose-regulated protein yes no 3 0.010361 53.519 By MS/MS By matching By MS/MS By matching By matching By matching 2 1 1 1 1 1 18108000 5269900 1893300 2165600 2293000 2364700 4121300 4031 823 4079 18105;18106;18107;18108;18109;18110;18111 12036;12037 12037 2 KTLCGTPNYIAPEVLSK VEYDGERKKTLCGTPN IAPEVLSKKGHSFEVD K K T S K K 1 0 1 0 1 0 1 1 0 1 2 2 0 0 2 1 2 0 1 1 0 17 1 1889.9921 P53350;B4E083 P53350 209 225 PLK1 Serine/threonine-protein kinase PLK1 yes no 3 3.1173E-45 117.27 By matching By MS/MS By matching By matching By matching By matching 1 15181000 0 15181000 0 0 0 0 4032 962 4080 18112 12038 12038 1 KTLEEPVSTEKNIG YSRKGSQKKTLEEPVS VSTEKNIG________ K K T I G - 0 0 1 0 0 0 3 1 0 1 1 2 0 0 1 1 2 0 0 1 0 14 2 1543.8094 Q99590-2;F8VXG7;Q99590 Q99590-2 1135 1148 SCAF11 Protein SCAF11 yes no 3 3.1497E-07 97.223 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 33034000 5730300 2988400 5391800 6388900 7109100 5425800 4033 547 4081 18113;18114;18115;18116;18117;18118 12039;12040 12039 2 KTMENVDSLDK EGKEGNSKKTMENVDS ENVDSLDKLECRFKLN K K T D K L 0 0 1 2 0 0 1 0 0 0 1 2 1 0 0 1 1 0 0 1 0 11 1 1278.6126 Q96ST3 Q96ST3 1154 1164 SIN3A Paired amphipathic helix protein Sin3a yes yes 2 0.025937 73.082 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1799800 0 0 0 0 874000 925830 4034 1420 4082 18119;18120 12041;12042 12041 2 KTNYLVMGRDSGQSK KVTGNVSKKTNYLVMG GRDSGQSKSDKAAALG K K T S K S 0 1 1 1 0 1 0 2 0 0 1 2 1 0 0 2 1 0 1 1 0 15 2 1682.841 P35251-2;P35251;H0Y8U4 P35251-2 444 458 RFC1 Replication factor C subunit 1 yes no 3 0.0022702 79.639 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 3204500 1494500 0 0 0 0 1710000 4035 896 4083 18121;18122 12043;12044 12043 2 KTPEQLHMLK GSTGKICKKTPEQLHM PEQLHMLKSAFVRTQW K K T L K S 0 0 0 0 0 1 1 0 1 0 2 2 1 0 1 0 1 0 0 0 0 10 1 1223.6696 Q9UKY1;H0YB50 Q9UKY1 667 676 ZHX1 Zinc fingers and homeoboxes protein 1 yes no 3 0.030584 49.3 By matching By MS/MS By matching By matching By matching By matching 1 1650500 0 1650500 0 0 0 0 4036 1604 4084 18123 12045 12045 1 KTPESKPTILVK AMAKVLNKKTPESKPT SKPTILVKNKKLEKEK K K T V K N 0 0 0 0 0 0 1 0 0 1 1 3 0 0 2 1 2 0 0 1 0 12 2 1339.8075 Q9Y3B9 Q9Y3B9 103 114 RRP15 RRP15-like protein yes yes 3 0.0062268 88.803 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 16867000 0 1722800 2745800 969460 3756600 7672400 4037 1644 4085 18124;18125;18126;18127;18128 12046;12047 12046 2 KTPLSTGGTLAFVSPSLAVHK GSATSNWKKTPLSTGG SPSLAVHKSSSAVDRQ K K T H K S 2 0 0 0 0 0 0 2 1 0 3 2 0 1 2 3 3 0 0 2 0 21 1 2110.1786 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7;F5H7D9;H7C3H1 Q86YP4 585 605 GATAD2A Transcriptional repressor p66-alpha yes no 3;4 0 181.49 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 281840000 0 98413000 0 37862000 0 145570000 4038 170 4086 18129;18130;18131 12048;12049 12048 2 KTPPEDCEGPFRPAEILK TVNSTNCKKTPPEDCE FRPAEILKEGSVLDIL K K T L K E 1 1 0 1 1 0 3 1 0 1 1 2 0 1 4 0 1 0 0 0 0 18 2 2083.0408 P49790;F6QR24 P49790 587 604 NUP153 Nuclear pore complex protein Nup153 yes no 3 0.00581 54.237 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 49348000 9599600 15008000 8404600 0 3425700 12910000 4039 531 4087 18132;18133;18134;18135;18136 12050;12051;12052;12053;12054;12055 12050 6 KTPTPREEADVQK EKPAGRKKKTPTPREE REEADVQKSALREEKV K K T Q K S 1 1 0 1 0 1 2 0 0 0 0 2 0 0 2 0 2 0 0 1 0 13 2 1497.7787 Q8N8Y5 Q8N8Y5 10 22 ZFP41 Zinc finger protein 41 homolog yes yes 3 0.026418 57.164 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 10611000 2168500 2045000 6229000 0 168440 0 4040 1309 4088 18137;18138;18139;18140 12056 12056 1 KTQELAFATHQDPADPK VAIEDMQKKTQELAFA HQDPADPKMLQMVLQG K K T P K M 3 0 0 2 0 2 1 0 1 0 1 2 0 1 2 0 2 0 0 0 0 17 1 1895.9377 Q96N67-4;Q96N67-3;Q96N67-5;Q96N67-2;Q96N67-6;Q96N67;H0Y7L2;F8W9H6 Q96N67-4 1961 1977 DOCK7 Dedicator of cytokinesis protein 7 yes no 3 0.010644 39.753 By matching By matching By matching By matching By MS/MS By matching 1 1 1 4080000 1242600 0 0 0 1897200 940220 4041 1409 4089 18141;18142;18143 12057 12057 1 KTQMAEVLPSPR KGGKAKGKKTQMAEVL AEVLPSPRGQRVIPRI K K T P R G 1 1 0 0 0 1 1 0 0 0 1 1 1 0 2 1 1 0 0 1 0 12 1 1355.7231 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5 P11388 1204 1215 TOP2A DNA topoisomerase 2-alpha yes no 3 0.012109 50.467 By matching By matching By matching By matching By matching By MS/MS 1 1833000 0 0 0 0 0 1833000 4042 655 4090 18144 12058 12058 1 KTQPTVINNLK GEAVKTLKKTQPTVIN PTVINNLKKGAVEDVI K K T L K K 0 0 2 0 0 1 0 0 0 1 1 2 0 0 1 0 2 0 0 1 0 11 1 1254.7296 O15226;G3V1N1 O15226 513 523 NKRF NF-kappa-B-repressing factor yes no 2;3 3.9583E-07 108.98 By MS/MS By MS/MS By matching By matching By MS/MS By matching 2 2 2 1 2 6261700 1101800 1144200 1508300 633190 1874200 0 4043 578 4091 18145;18146;18147;18148;18149;18150;18151;18152;18153 12059;12060;12061;12062 12059 3 KTRHQWPSEEASMDLVK EEEDGKGKKTRHQWPS EASMDLVKDAKICAFL K K T V K D 1 1 0 1 0 1 2 0 1 0 1 2 1 0 1 2 1 1 0 1 0 17 2 2041.0051 Q8N556;E9PDT7 Q8N556 136 152 AFAP1 Actin filament-associated protein 1 yes no 4 0.027931 37.477 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2654800 0 0 1336400 572590 0 745850 4044 423 4092 18154;18155;18156 12063 12063 1 KTRSIGSAVDQGNESIVAK DGPPGPVKKTRSIGSA GNESIVAKTTVTVPND K K T A K T 2 1 1 1 0 1 1 2 0 2 0 2 0 0 0 3 1 0 0 2 0 19 2 1959.0385 Q9H0H5;F8VRD2;F8W1E5 Q9H0H5 200 218 RACGAP1 Rac GTPase-activating protein 1 yes no 4 2.3819E-06 87.157 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 9352000 0 2782400 2681500 2223900 367240 1297000 4045 1479 4093 18157;18158;18159;18160;18161 12064;12065 12064 2 KTSEVDLAKPLVK TFISVQLKKTSEVDLA DLAKPLVKFIQQTYPS K K T V K F 1 0 0 1 0 0 1 0 0 0 2 3 0 0 1 1 1 0 0 2 0 13 2 1426.8395 Q8WUM4;E9PFU1;F8WEQ7;F8WBR8;C9IZF9 Q8WUM4 11 23 PDCD6IP Programmed cell death 6-interacting protein yes no 3 0.0069686 69.352 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 5548300 388160 1022500 1236500 642880 605280 1653000 4046 429 4094 18162;18163;18164;18165;18166;18167 12066 12066 1 KTSFEIAELKER EKLEAAKKKTSFEIAE EIAELKERLKASRETI K K T E R L 1 1 0 0 0 0 3 0 0 1 1 2 0 1 0 1 1 0 0 0 0 12 2 1449.7827 F8W0J4;O95619 F8W0J4 135 146 YEATS4 YEATS domain-containing protein 4 yes no 3 0.01165 68.171 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5230800 0 1013500 1150700 0 1039200 2027400 4047 550 4095 18168;18169;18170;18171 12067 12067 1 KTSSQLVTMHDLK YSLPITVKKTSSQLVT LVTMHDLKQGLGPSGT K K T L K Q 0 0 0 1 0 1 0 0 1 0 2 2 1 0 0 2 2 0 0 1 0 13 1 1486.7814 Q5T7U1;Q9Y5Q8-2;H7BY84;Q9Y5Q8;Q9Y5Q8-3;H0Y5D2;H0Y3Y0;C9J393;H9KV68 Q5T7U1 286 298 GTF3C5 General transcription factor 3C polypeptide 5 yes no 3 0.0023187 62.081 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4451100 0 0 960330 360070 1560500 1570200 4048 657 4096 18172;18173;18174;18175 12068 12068 1 KTSTPKINFVGGNK VPTNMAAKKTSTPKIN INFVGGNKLQSTGNKA K K T N K L 0 0 2 0 0 0 0 2 0 1 0 3 0 1 1 1 2 0 0 1 0 14 2 1489.8253 Q96KR1;B5MEH6 Q96KR1 496 509 ZFR Zinc finger RNA-binding protein yes no 3 0.01035 59.796 By matching By matching By MS/MS By matching By matching By matching 1 2096400 0 0 2096400 0 0 0 4049 1403 4097 18176 12069 12069 1 KTTALDQLSEK GELDTMSKKTTALDQL ALDQLSEKMKEKTQEL K K T E K M 1 0 0 1 0 1 1 0 0 0 2 2 0 0 0 1 2 0 0 0 0 11 1 1232.6612 P49454 P49454 2069 2079 CENPF Centromere protein F yes yes 3 0.0063999 64.64 By matching By MS/MS By MS/MS By matching By matching By matching 2 1 1 2500200 0 523900 828480 0 0 1147800 4050 936 4098 18177;18178;18179;18180 12070;12071 12070 2 KTTSVSLTIGSSSPK ________________ TIGSSSPKTGVTTAVI K K T P K T 0 0 0 0 0 0 0 1 0 1 1 2 0 0 1 5 3 0 0 1 0 15 1 1491.8144 Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-5;Q8WX93-2;Q8WX93-9;D6R9Z5;D6RBH5;D6RBB1;F8WC13;H0Y952;Q8WX93-6 Q8WX93-3 7 21 PALLD Palladin yes no 3 5.1829E-33 119 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 1 1 7626700 0 1464800 1791400 985590 0 3384900 4051 1343 4099 18181;18182;18183;18184;18185 12072;12073;12074 12073 2 KTTTLSGTAPAAGVVPSR STSTSSMKKTTTLSGT AAGVVPSRVKATPMPS K K T S R V 3 1 0 0 0 0 0 2 0 0 1 1 0 0 2 2 4 0 0 2 0 18 1 1712.9421 E7EVA0;P27816-6;P27816;P27816-2;P27816-4;E9PGM5;P27816-5;B9ZVR1;H0Y2V1;B4DSQ1;F8W9U4;H7C4C5;B5MEG9 E7EVA0 2016 2033 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.0050366 42.118 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 5091100 2341200 0 881000 1195600 0 673270 4052 388 4100 18186;18187;18188;18189 12075;12076 12076 2 KTTTLSGTAPAAGVVPSRVK STSTSSMKKTTTLSGT GVVPSRVKATPMPSRP K K T V K A 3 1 0 0 0 0 0 2 0 0 1 2 0 0 2 2 4 0 0 3 0 20 2 1940.1055 E7EVA0;P27816-6;P27816;P27816-2;P27816-4;E9PGM5;P27816-5;B9ZVR1;H0Y2V1;B4DSQ1;F8W9U4;H7C4C5;B5MEG9 E7EVA0 2016 2035 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3;4 6.9104E-52 118.23 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 61560000 13362000 5629800 8291700 9998300 15166000 9112000 4053 388 4101 18190;18191;18192;18193;18194;18195;18196;18197;18198;18199;18200;18201 12077;12078;12079;12080;12081;12082;12083;12084;12085;12086 12077 10 KTVDMESTEVFTK STSEENSKKTVDMEST ESTEVFTKKTKLTEEE K K T T K K 0 0 0 1 0 0 2 0 0 0 0 2 1 1 0 1 3 0 0 2 0 13 1 1513.7334 CON__P02663 CON__P02663 137 149 yes yes 2;3 0.0046943 65.528 By MS/MS By MS/MS By matching By matching By matching By matching 2 2 1 1 2 1 10695000 3097600 3382900 845200 203000 1920000 1246000 + 4054 289 4102 18202;18203;18204;18205;18206;18207;18208;18209;18210 12087;12088;12089;12090 12090 4 KTVVLPPIVASR LKIDSEIKKTVVLPPI LPPIVASRGQSEEPAG K K T S R G 1 1 0 0 0 0 0 0 0 1 1 1 0 0 2 1 1 0 0 3 0 12 1 1278.8024 B4DLG2;O75152;E9PQ61;E9PBY7 B4DLG2 388 399 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 3 4.805E-27 122.52 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 16665000 3714900 7003000 0 0 0 5947500 4055 97 4103 18211;18212;18213 12091;12092;12093 12092 3 KVAQPPLSAQATGSGQPTRK WNSSSSSKKVAQPPLS GSGQPTRKAGKGSRGG K K V R K A 3 1 0 0 0 3 0 2 0 0 1 2 0 0 3 2 2 0 0 1 0 20 2 2021.1018 H3BQQ2;Q86UK7-2;Q86UK7-3;Q86UK7;H3BR87;Q86UK7-4 H3BQQ2 460 479 ZNF598 Zinc finger protein 598 yes no 3 0.0025919 55.453 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 5707100 364810 1546800 0 1333400 1235700 1226500 4056 639 4104 18214;18215;18216;18217;18218 12094;12095;12096 12094 2 KVCYYYDGDIGNYYYGQGHPMKPHR YSQGGGKKKVCYYYDG GHPMKPHRIRMTHNLL K K V H R I 0 1 1 2 1 1 0 4 2 1 0 2 1 0 2 0 0 0 6 1 0 25 2 3080.3698 Q92769;H3BM24 Q92769 11 35 HDAC2 Histone deacetylase 2 yes no 4 7.4599E-05 56.488 By matching By matching By matching By matching By matching By MS/MS 1 2679700 0 0 0 0 0 2679700 4057 1358 4105 18219 12097 12097 1 KVEAPETNIDKTPK SLAQRLGKKVEAPETN TNIDKTPKKAQVSKSL K K V P K K 1 0 1 1 0 0 2 0 0 1 0 3 0 0 2 0 2 0 0 1 0 14 2 1568.841 B4DLG2;O75152;E9PQ61;E9PBY7 B4DLG2 256 269 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 3 2.5293E-198 169.4 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 84919000 17867000 10147000 15082000 11004000 20023000 10796000 4058 97 4106 18220;18221;18222;18223;18224;18225;18226 12098;12099;12100;12101;12102;12103;12104 12104 7 KVEQPVIEEPALK KKKMKSKKKVEQPVIE VIEEPALKRKKKKKRK K K V L K R 1 0 0 0 0 1 3 0 0 1 1 2 0 0 2 0 0 0 0 2 0 13 1 1478.8344 Q1ED39;H3BPL4 Q1ED39 275 287 KNOP1 Lysine-rich nucleolar protein 1 yes no 2;3 0.0023187 74.133 By matching By matching By matching By matching By MS/MS By MS/MS 1 2 2 2 2 11340000 1360300 1480400 0 1182600 4071100 3245500 4059 1157 4107 18227;18228;18229;18230;18231;18232;18233;18234;18235 12105;12106;12107;12108 12107 4 KVESTGAVPEFK EYPEAVSKKVESTGAV TGAVPEFKEEKLQLQP K K V F K E 1 0 0 0 0 0 2 1 0 0 0 2 0 1 1 1 1 0 0 2 0 12 1 1290.682 Q6YN16-2;Q6YN16;B4E136;B4DWC7 Q6YN16-2 211 222 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes no 2 0.0077665 90.689 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 2 1 1 2 1 11365000 1536300 2063000 1279400 1349300 2527000 2610400 4060 1239 4108 18236;18237;18238;18239;18240;18241;18242;18243 12109;12110;12111 12110 3 KVESTGAVPEFKEEK EYPEAVSKKVESTGAV VPEFKEEKLQLQPKPR K K V E K L 1 0 0 0 0 0 4 1 0 0 0 3 0 1 1 1 1 0 0 2 0 15 2 1676.8621 Q6YN16-2;Q6YN16;B4E136;B4DWC7 Q6YN16-2 211 225 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes no 3 4.799E-124 149.35 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 49145000 10351000 6560100 7531000 4676700 13648000 6378300 4061 1239 4109 18244;18245;18246;18247;18248;18249;18250 12112;12113;12114;12115;12116;12117 12117 6 KVFVEDDENSSQK FPTCPNRKKVFVEDDE DDENSSQKRSVIVCQS K K V Q K R 0 0 1 2 0 1 2 0 0 0 0 2 0 1 0 2 0 0 0 2 0 13 1 1523.7104 Q9ULJ3-2;Q9ULJ3 Q9ULJ3-2 134 146 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes no 3 0.0020877 62.732 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 3895300 511730 655690 1346300 0 442370 939210 4062 1607 4110 18251;18252;18253;18254;18255 12118;12119;12120;12121;12122 12120 5 KVLGSSTSATNSTSVSSRK VVAARAPRKVLGSSTS STSVSSRKAENKYAGG R K V R K A 1 1 1 0 0 0 0 1 0 0 1 2 0 0 0 7 3 0 0 2 0 19 2 1895.9912 Q15004;H0YMA4;A6NNU5 Q15004 24 42 KIAA0101 PCNA-associated factor yes no 3 0.0043256 55.337 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 7568500 0 1568000 1483800 716470 690540 3109600 4063 1124 4111 18256;18257;18258;18259;18260 12123;12124 12124 2 KVLKGEVTPDHLIR PKNNILFKKVLKGEVT VTPDHLIRMSPEELAS K K V I R M 0 1 0 1 0 0 1 1 1 1 2 2 0 0 1 0 1 0 0 2 0 14 2 1603.941 Q92576-2;Q92576;E7EVH3;E7ER40 Q92576-2 911 924 PHF3 PHD finger protein 3 yes no 4 0.0014427 68.277 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 5562300 0 0 0 0 1933700 3628600 4064 1353 4112 18261;18262 12125;12126 12125 2 KVNPDLQVEVKPSIR RHRLQYKKKVNPDLQV VEVKPSIRARKIQEEK K K V I R A 0 1 1 1 0 1 1 0 0 1 1 2 0 0 2 1 0 0 0 3 0 15 2 1720.9836 Q96KR1;B5MEH6 Q96KR1 613 627 ZFR Zinc finger RNA-binding protein yes no 3;4 3.5608E-30 116.87 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 3 3 116150000 17962000 7045000 12278000 9162000 29575000 40129000 4065 1403 4113 18263;18264;18265;18266;18267;18268;18269;18270;18271;18272;18273;18274;18275 12127;12128;12129;12130;12131;12132;12133;12134;12135;12136 12134 10 KVPAAPITVSK PGPEDARKKVPAAPIT AAPITVSKEAPAPVAH K K V S K E 2 0 0 0 0 0 0 0 0 1 0 2 0 0 2 1 1 0 0 2 0 11 1 1109.6808 Q96KM6 Q96KM6 472 482 ZNF512B Zinc finger protein 512B yes yes 2 0.018654 80.69 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 81854000 5183500 12617000 19477000 12906000 14944000 16727000 4066 1402 4114 18276;18277;18278;18279;18280;18281 12137 12137 1 KVPQVSTPTLVEVSR ALIVRYTRKVPQVSTP PTLVEVSRSLGKVGTR R K V S R S 0 1 0 0 0 1 1 0 0 0 1 1 0 0 2 2 2 0 0 4 0 15 1 1638.9305 CON__P02769;P02768;CON__P02768-1;E7ESU5;H0YA55;D6RHD5;B7WNR0;P02768-2;C9JKR2;Q8IUK7 CON__P02769 437 451 ALB Serum albumin no no 2;3 0 204.67 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 1 6 2 1502600000 291730000 321330000 119530000 162500000 53045000 554420000 + 4067 294;293 4115 18282;18283;18284;18285;18286;18287;18288;18289;18290;18291;18292;18293;18294;18295;18296;18297;18298 12138;12139;12140;12141;12142;12143;12144;12145;12146;12147;12148;12149;12150;12151 12140 13 KVPQVSTPTLVEVSRSLGK ALIVRYTRKVPQVSTP EVSRSLGKVGTRCCTK R K V G K V 0 1 0 0 0 1 1 1 0 0 2 2 0 0 2 3 2 0 0 4 0 19 2 2024.163 CON__P02769 CON__P02769 437 455 yes yes 3;4 0 183.71 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 3 2 1 1 877560000 68662000 48970000 538030000 146840000 27035000 48018000 + 4068 294 4116 18299;18300;18301;18302;18303;18304;18305;18306;18307 12152;12153;12154;12155;12156;12157;12158;12159;12160 12157 9 KVPVSVNLLSK GRHFYQRKKVPVSVNL VSVNLLSKNLSREIND K K V S K N 0 0 1 0 0 0 0 0 0 0 2 2 0 0 1 2 0 0 0 3 0 11 1 1182.7336 O76021;I3L3C4 O76021 178 188 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 2 0.02458 74.392 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 26430000 17494000 2015700 0 0 0 6920200 4069 753 4117 18308;18309;18310 12161;12162 12161 2 KVPWFDQQNGRTYLK AKIYTEAKKVPWFDQQ QNGRTYLKYSIKALVQ K K V L K Y 0 1 1 1 0 2 0 1 0 0 1 2 0 1 1 0 1 1 1 1 0 15 2 1878.9741 Q92522 Q92522 76 90 H1FX Histone H1x yes yes 3 0.0015172 83.869 By matching By matching By matching By matching By MS/MS By matching 1 4016400 0 0 0 0 4016400 0 4070 1350 4118 18311 12163 12163 1 KVQDGLSDIAEK HLKTKTCKKVQDGLSD GLSDIAEKFLKKDQSD K K V E K F 1 0 0 2 0 1 1 1 0 1 1 2 0 0 0 1 0 0 0 1 0 12 1 1301.6827 F8WDE0;P46100-6;P46100-2;P46100-5;P46100-3;P46100-4;P46100 F8WDE0 883 894 ATRX Transcriptional regulator ATRX yes no 2;3 1.7438E-06 102.33 By matching By matching By matching By MS/MS By matching By MS/MS 1 2 2 2 1 2 10496000 692020 2299200 2038800 1288200 1267200 2910100 4071 569 4119 18312;18313;18314;18315;18316;18317;18318;18319;18320;18321 12164;12165;12166 12166 3 KVQEFEHINGR GVMSLVKKKVQEFEHI EFEHINGRWSMPELMP K K V G R W 0 1 1 0 0 1 2 1 1 1 0 1 0 1 0 0 0 0 0 1 0 11 1 1355.6946 Q12873;E9PG89;Q12873-2 Q12873 1501 1511 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 3 0.031418 42.976 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2777600 0 947890 739480 0 0 1090200 4072 430 4120 18322;18323;18324 12167 12167 1 KVQEFEHVNGR GVMSLIRKKVQEFEHV EFEHVNGRWSMPELAE K K V G R W 0 1 1 0 0 1 2 1 1 0 0 1 0 1 0 0 0 0 0 2 0 11 1 1341.6789 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1479 1489 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.0017862 82.494 By matching By MS/MS By matching By matching By matching By matching 1 1 1 6882700 0 1464900 3794200 0 0 1623700 4073 486 4121 18325;18326;18327 12168 12168 1 KVTFGLNRNMTAEFK NKTPSSSKKVTFGLNR RNMTAEFKKTDKSILV K K V F K K 1 1 2 0 0 0 1 1 0 0 1 2 1 2 0 0 2 0 0 1 0 15 2 1754.9138 Q14684-2;Q14684 Q14684-2 665 679 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 3 0.014807 53.448 By matching By MS/MS By matching By matching By matching By matching 1 1 27466000 0 9619100 0 17847000 0 0 4074 1111 4122 18328;18329 12169 12169 1 KVVDHYENPRNVGSLDK APARLYHKKVVDHYEN RNVGSLDKTSKNVGTG K K V D K T 0 1 2 2 0 0 1 1 1 0 1 2 0 0 1 1 0 0 1 3 0 17 2 1969.0017 F5H5N2;B4DNC9;B3KQ30;Q9H1K1 F5H5N2 38 54 ISCU Iron-sulfur cluster assembly enzyme ISCU, mitochondrial yes no 4 0.036526 35.473 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 5480900 0 319660 1288800 1059600 604840 2208000 4075 70 4123 18330;18331;18332;18333;18334 12170 12170 1 KVVQETGIKVR RVIGSVGKKVVQETGI QETGIKVRSRSHGLSM K K V V R S 0 1 0 0 0 1 1 1 0 1 0 2 0 0 0 0 1 0 0 3 0 11 2 1255.7612 C9J0C6;G5E9X1;B3KQH5;Q9UL03-3;Q9UL03 C9J0C6 45 55 INTS6 Integrator complex subunit 6 yes no 3 0.032991 64.224 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 4483200 0 801000 1018500 681720 721840 1260200 4076 71 4124 18335;18336;18337;18338;18339 12171 12171 1 KVVQPVMPTSLR KKVSDKEKKVVQPVMP PVMPTSLRMTRSATQA K K V L R M 0 1 0 0 0 1 0 0 0 0 1 1 1 0 2 1 1 0 0 3 0 12 1 1353.7802 A8MTM6;Q15398;Q15398-1;G3V4E5 A8MTM6 193 204 DLGAP5 Disks large-associated protein 5 yes no 3 0.0010155 89.356 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 12021000 0 1292500 3046500 0 2476500 5205500 4077 42 4125 18340;18341;18342;18343 12172;12173;12174 12174 2 KVVVVEQNGSFQVKIPK SHSKKTVKKVVVVEQN SFQVKIPKNFVCEHCF K K V P K N 0 0 1 0 0 2 1 1 0 1 0 3 0 1 1 1 0 0 0 5 0 17 2 1898.0989 Q8NDX6 Q8NDX6 83 99 ZNF740 Zinc finger protein 740 yes yes 3;4 7.3736E-05 87.647 By MS/MS By matching By matching By MS/MS By matching By matching 1 2 25330000 0 0 0 25330000 0 0 4078 1320 4126 18344;18345;18346 12175;12176;12177;12178 12176 4 KVWLDPNETNEIANANSR SVLRCGKKKVWLDPNE EIANANSRQQIRKLIK K K V S R Q 2 1 4 1 0 0 2 0 0 1 1 1 0 0 1 1 1 1 0 1 0 18 1 2070.013 P84098 P84098 21 38 RPL19 60S ribosomal protein L19 yes yes 3 0.002306 61.684 By matching By matching By matching By matching By matching By MS/MS 1 5197600 0 0 0 0 0 5197600 4079 1016 4127 18347 12179 12179 0 KVYASSGDGEVYVWDVNSRK STFSSDSKKVYASSGD VWDVNSRKCLNRFVDE K K V R K C 1 1 1 2 0 0 1 2 0 0 0 2 0 0 0 3 0 1 2 4 0 20 2 2258.0968 Q9Y5J1;B2RAX6 Q9Y5J1 396 415 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 3 0.0067616 50.358 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 10080000 0 0 5487300 849810 1138500 2604700 4080 1654 4128 18348;18349;18350;18351 12180;12181 12180 2 KVYENYPTYDLTER VTMKQICKKVYENYPT PTYDLTERKDFIKTTV K K V E R K 0 1 1 1 0 0 2 0 0 0 1 1 0 0 1 0 2 0 3 1 0 14 1 1789.8523 P35659;P35659-2;B4DFG0;H0Y993 P35659 349 362 DEK Protein DEK yes no 3 0.00057218 78.401 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 17491000 3242600 1374900 6045100 1004800 5823600 0 4081 901 4129 18352;18353;18354;18355;18356 12182;12183;12184;12185 12184 4 KVYENYPTYDLTERK VTMKQICKKVYENYPT TYDLTERKDFIKTTVK K K V R K D 0 1 1 1 0 0 2 0 0 0 1 2 0 0 1 0 2 0 3 1 0 15 2 1917.9472 P35659;P35659-2;B4DFG0;H0Y993 P35659 349 363 DEK Protein DEK yes no 3 3.2374E-56 130.47 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 217410000 32713000 31780000 32565000 20717000 42302000 57333000 4082 901 4130 18357;18358;18359;18360;18361;18362 12186;12187;12188;12189;12190;12191 12189 6 KWDLSELPK PGERLRKKKWDLSELP WDLSELPKFEKNFYVE K K W P K F 0 0 0 1 0 0 1 0 0 0 2 2 0 0 1 1 0 1 0 0 0 9 1 1114.6023 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 42 50 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 2 1.5546E-29 136.49 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 34566000 0 0 0 22421000 12145000 0 4083 1361;629 4131 18363;18364 12192;12193 12192 2 KWDLSELPKFEK PGERLRKKKWDLSELP SELPKFEKNFYVEHPE K K W E K N 0 0 0 1 0 0 2 0 0 0 2 3 0 1 1 1 0 1 0 0 0 12 2 1518.8082 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 42 53 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 3 1.0791E-49 132.06 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 244170000 0 86158000 0 0 0 158010000 4084 1361;629 4132 18365;18366 12194;12195 12195 2 KWGVPIEK RITVAWCKKWGVPIEK KWGVPIEKIYNKTQRE K K W E K I 0 0 0 0 0 0 1 1 0 1 0 2 0 0 1 0 0 1 0 1 0 8 1 955.5491 P11387 P11387 735 742 TOP1 DNA topoisomerase 1 yes yes 2 7.5604E-15 125.16 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 2 1 13529000 3055400 1298100 0 0 6185000 2990500 4085 825 4133 18367;18368;18369;18370;18371 12196;12197 12196 1 KWNLDELPK PGEKLVKKKWNLDELP WNLDELPKFEKNFYQE K K W P K F 0 0 1 1 0 0 1 0 0 0 2 2 0 0 1 0 0 1 0 0 0 9 1 1141.6132 P17844;E7ETL9 P17844 45 53 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 2 2.4447E-154 176.6 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 83871000 22291000 0 14452000 0 7699200 39428000 4086 853 4134 18372;18373;18374;18375;18376 12198;12199;12200;12201 12200 4 KWNLDELPKFEK PGEKLVKKKWNLDELP DELPKFEKNFYQEHPD K K W E K N 0 0 1 1 0 0 2 0 0 0 2 3 0 1 1 0 0 1 0 0 0 12 2 1545.8191 P17844;E7ETL9 P17844 45 56 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 3 0 236.08 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 370710000 0 54422000 40302000 74181000 21370000 180440000 4087 853 4135 18377;18378;18379;18380;18381;18382 12202;12203;12204;12205;12206 12204 5 KYADLLEESR EKLAALCKKYADLLEE ADLLEESRSVQKQMKI K K Y S R S 1 1 0 1 0 0 2 0 0 0 2 1 0 0 0 1 0 0 1 0 0 10 1 1222.6194 Q9NUQ3 Q9NUQ3 162 171 TXLNG Gamma-taxilin yes yes 3 0.0049912 75.387 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 8988300 1127800 1745500 963060 1002300 1784000 2365700 4088 1546 4136 18383;18384;18385;18386;18387;18388 12207;12208;12209 12209 3 KYADLLEESRSVQK EKLAALCKKYADLLEE EESRSVQKQMKILQKK K K Y Q K Q 1 1 0 1 0 1 2 0 0 0 2 2 0 0 0 2 0 0 1 1 0 14 2 1664.8733 Q9NUQ3 Q9NUQ3 162 175 TXLNG Gamma-taxilin yes yes 3 0.0064671 65.495 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 9360700 2621800 540240 2763500 2242500 1192600 0 4089 1546 4137 18389;18390;18391;18392;18393 12210 12210 1 KYAELLEEHRNSQK EKLAALCKKYAELLEE EEHRNSQKQMKLLQKK K K Y Q K Q 1 1 1 0 0 1 3 0 1 0 2 2 0 0 0 1 0 0 1 0 0 14 2 1743.8904 P40222 P40222 195 208 TXLNA Alpha-taxilin yes yes 3;4 0.0022812 65.895 By matching By matching By MS/MS By matching By matching By MS/MS 1 2 2 2 2 18367000 0 950580 3506100 4353000 4683300 4873900 4090 907 4138 18394;18395;18396;18397;18398;18399;18400;18401;18402 12211;12212;12213;12214;12215 12214 5 KYEDICPSTHNMDVPNIK GIDIFTGKKYEDICPS NMDVPNIKRNDYQKLV K K Y I K R 0 0 2 2 1 0 1 0 1 2 0 2 1 0 2 1 1 0 1 1 0 18 1 2159.998 F8WCJ1;C9J7B5;C9J4W5;I3L397;Q9GZV4;P63241;P63241-2;I3L504;Q6IS14 F8WCJ1 68 85 EIF5A2;EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A-2;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like yes no 3 3.3105E-14 98.281 By matching By matching By matching By matching By matching By MS/MS 1 4901200 0 0 0 0 0 4901200 4091 228 4139 18403 12216 12216 1 KYFLHDDRDDGVDYWAK PEYTPKSKKYFLHDDR DGVDYWAKRGRGRGTF K K Y A K R 1 1 0 5 0 0 0 1 1 0 1 2 0 1 0 0 0 1 2 1 0 17 2 2141.9807 Q9NYF8-2;Q9NYF8;Q9NYF8-4;H0YF14 Q9NYF8-2 843 859 BCLAF1 Bcl-2-associated transcription factor 1 yes no 4 0.0032756 50.04 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 45181000 0 0 13180000 0 1912600 30088000 4092 1563 4140 18404;18405;18406 12217;12218 12217 2 KYGGLKMPTQSEEEK AICWLYWKKYGGLKMP PTQSEEEKLSPSPTTE K K Y E K L 0 0 0 0 0 1 3 2 0 0 1 3 1 0 1 1 1 0 1 0 0 15 2 1723.8451 E7EQY4;Q9BTC8-2;D6W5A2;F8W8M8;E7EV10;Q9BTC8 E7EQY4 411 425 MTA3 Metastasis-associated protein MTA3 yes no 3 0.031813 60.196 By matching By matching By matching By matching By matching By MS/MS 1 1 1 6741900 195350 1763700 0 0 0 4782900 4093 331 4141 18407;18408;18409 12219 12219 0 KYGGLKTPTQLEGATR ASCWIYWKKYGGLKTP TQLEGATRGTTEPHSR K K Y T R G 1 1 0 0 0 1 1 3 0 0 2 2 0 0 1 0 3 0 1 0 0 16 2 1718.9315 O94776;Q68DB1 O94776 400 415 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 4 0.009971 44.734 By matching By matching By matching By matching By matching By MS/MS 1 1 3072900 0 938100 0 0 0 2134800 4094 754 4142 18410;18411 12220 12220 1 KYGGSVGSQPPPVAPEPGPVPSSPSQEPPTK RDKAERAKKYGGSVGS PSQEPPTKREYDQCRI K K Y T K R 1 0 0 0 0 2 2 4 0 0 0 2 0 0 10 5 1 0 1 3 0 31 1 3054.5298 E9PS08;B4E0P8;E9PJ81;E9PRQ7;Q04323;Q04323-2 E9PS08 36 66 UBXN1 UBX domain-containing protein 1 yes no 3 0.0013863 33.153 By matching By matching By MS/MS By matching By matching By matching 1 3202300 0 0 3202300 0 0 0 4095 154 4143 18412 12221 12221 1 KYNPDSGLEVLAVQR DTGMVKAKKYNPDSGL LEVLAVQRVSKTQAWQ K K Y Q R V 1 1 1 1 0 1 1 1 0 0 2 1 0 0 1 1 0 0 1 2 0 15 1 1687.8893 Q9H6R0;Q9H6R0-2;I3L1L6 Q9H6R0 379 393 DHX33 Putative ATP-dependent RNA helicase DHX33 yes no 3 6.6313E-21 108.23 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 19470000 14100000 5369500 0 0 0 0 4096 1496 4144 18413;18414 12222;12223 12222 1 KYNPDSGLEVLAVQRVSK DTGMVKAKKYNPDSGL LAVQRVSKTQAWQRTG K K Y S K T 1 1 1 1 0 1 1 1 0 0 2 2 0 0 1 2 0 0 1 3 0 18 2 2002.0847 Q9H6R0;Q9H6R0-2;I3L1L6 Q9H6R0 379 396 DHX33 Putative ATP-dependent RNA helicase DHX33 yes no 3 0 202.84 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 148950000 17999000 71325000 0 25395000 0 34226000 4097 1496 4145 18415;18416;18417;18418 12224;12225;12226;12227 12225 4 KYNPTWHCIVGR HIKKEFDKKYNPTWHC TWHCIVGRNFGSYVTH K K Y G R N 0 1 1 0 1 0 0 1 1 1 0 1 0 0 1 0 1 1 1 1 0 12 1 1529.7562 P63167;Q96FJ2 P63167 49 60 DYNLL1;DYNLL2 Dynein light chain 1, cytoplasmic;Dynein light chain 2, cytoplasmic yes no 3 0.00092472 77.74 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 17839000 0 3516700 1256800 1396100 2910400 8759400 4098 1004 4146 18419;18420;18421;18422;18423;18424 12228;12229;12230;12231;12232 12230 5 KYPCPECGSFFR KMESDGEKKYPCPECG PECGSFFRSKSYLNKH K K Y F R S 0 1 0 0 2 0 1 1 0 0 0 1 0 2 2 1 0 0 1 0 0 12 1 1546.6697 Q9HBE1-3;Q9HBE1 Q9HBE1-3 558 569 PATZ1 POZ-, AT hook-, and zinc finger-containing protein 1 yes no 3 0.0020634 66.538 By matching By matching By matching By matching By MS/MS By matching 1 3661500 0 0 0 0 3661500 0 4099 1517 4147 18425 12233 12233 1 KYQEQLVQEQELAK SELEYDMKKYQEQLVQ VQEQELAKHADVAGTA K K Y A K H 1 0 0 0 0 4 3 0 0 0 2 2 0 0 0 0 0 0 1 1 0 14 1 1732.8996 P42695;E9PQA3 P42695 1258 1271 NCAPD3 Condensin-2 complex subunit D3 yes no 3 0.0123 43.69 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 6844400 540420 1707200 1103600 0 0 3493200 4100 917 4148 18426;18427;18428;18429 12234;12235 12234 2 LAAAILGGVDQIHIKPGAK AWNPFRSKLAAAILGG IHIKPGAKVLYLGAAS K L A A K V 4 0 0 1 0 1 0 3 1 3 2 2 0 0 1 0 0 0 0 1 0 19 1 1871.0993 P22087 P22087 144 162 FBL rRNA 2-O-methyltransferase fibrillarin yes yes 3;4 1.3376E-100 135.47 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 2 2 2 642270000 0 81777000 97811000 142370000 64438000 255870000 4101 862 4149 18430;18431;18432;18433;18434;18435;18436;18437;18438 12236;12237;12238;12239;12240;12241;12242;12243;12244 12238 8 LAAAISEVVSQTPASTTQAGAPPRDTSQSDKDLDDALDK SLKFEDAKLAAAISEV DLDDALDKLSDSLGQR K L A D K L 7 1 0 6 0 3 1 1 0 1 3 2 0 0 3 5 4 0 0 2 0 39 2 3968.9451 G5E9D3;P20810-5;E7ESM9;P20810-7;P20810-6;B7Z468;H0Y7F0;P20810-3;E9PDE4;E7ES10;P20810-4;E9PCH5;G5E946;B7Z574;P20810-2;P20810;E7EQ12;E7EQA0 G5E9D3 577 615 CAST Calpastatin yes no 4 0.0019786 22.768 By matching By matching By MS/MS By matching By matching By matching 1 51073000 0 0 51073000 0 0 0 4102 375 4150 18439 12245 12245 1 LAACEPLK ELRPPPTKLAACEPLK LAACEPLKHGLQGASL K L A L K H 2 0 0 0 1 0 1 0 0 0 2 1 0 0 1 0 0 0 0 0 0 8 0 900.47389 Q5TGY3 Q5TGY3 1419 1426 AHDC1 AT-hook DNA-binding motif-containing protein 1 yes yes 2 0.039944 68.224 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5779600 502290 1372400 0 0 0 3904900 4103 1199 4151 18440;18441;18442 12246 12246 1 LAADDFR LLQIDNARLAADDFRL RLAADDFRLKYENEVA R L A F R L 2 1 0 2 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 7 0 806.39227 P13645;CON__P13645;CON__P02535-1;CON__P08730-1;CON__A2A4G1;Q7Z3Y7;CON__Q148H6;CON__Q7Z3Y7;C9JM50;P08727;CON__P08727;CON__P19001;CON__P05784;P19012;CON__P19012;CON__Q9Z2K1;CON__Q3ZAW8;O76013-2;CON__Q92764;C4AM86;Q14532;CON__Q14532;O76014;CON__A2AB72;Q92764;O76015;CON__O76015;O76013;CON__O76013;CON__O76014;Q2M2I5;CON__Q2M2I5;P02533;CON__P02533;CON__Q6IFX2;Q04695;CON__Q04695;CON__Q9QWL7;Q15323;CON__Q9UE12;CON__Q15323;CON__A2A5Y0;Q14525;CON__Q14525;CON__Q497I4;CON__REFSEQ:XP_986630;P08779;CON__P08779;F5GWP8;P13646;P13646-2;C9JA77;P13646-3;CON__ENSEMBL:ENSP00000377550;F8VZY9;P05783 P13645 229 235 KRT10;KRT28;KRT19;KRT15;KRT36;KRT35;KRT32;KRT37;KRT38;KRT24;KRT14;KRT17;KRT31;KRT33B;KRT16;JUP;KRT13;KRT18 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 19;Keratin, type I cytoskeletal 15;Keratin, type I cuticular Ha6;Keratin, type I cuticular Ha2;Keratin, type I cuticular Ha7;Keratin, type I cuticular Ha5;Keratin, type I cuticular Ha8;Keratin, type I cytoskeletal 24;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17;Keratin, type I cuticular Ha1;Keratin, type I cuticular Ha3-II;Keratin, type I cytoskeletal 16;Keratin, type I cytoskeletal 13;Keratin, type I cytoskeletal 18 no no 2 0.00095246 114.72 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 9288600 693830 3893100 0 1596700 1093500 2011500 + 4104 298;286;304;297;485;834;281;549 4152 18443;18444;18445;18446;18447 12247 12247 1 LAAGSAIMK KSDMSRLRLAAGSAIM AAGSAIMKLAQEPCYH R L A M K L 3 0 0 0 0 0 0 1 0 1 1 1 1 0 0 1 0 0 0 0 0 9 0 860.47897 Q29RF7 Q29RF7 890 898 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 0.015314 76.1 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 1 20100000 1740100 1743500 3527200 2068100 5364300 5656800 4105 1159 4153 18448;18449;18450;18451;18452;18453 12248;12249 12248 2 LAALKRPDDVPLSLSPSK AAHKPRARLAALKRPD PLSLSPSKRACASPSA R L A S K R 2 1 0 2 0 0 0 0 0 0 4 2 0 0 3 3 0 0 0 1 0 18 2 1906.0888 Q9UFC0 Q9UFC0 229 246 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes yes 3 1.9241E-209 162.59 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 158010000 32138000 19525000 8584100 5447900 2275100 90043000 4106 1587 4154 18454;18455;18456;18457;18458;18459 12250;12251;12252;12253;12254;12255;12256 12253 7 LAANDFFRHQLSK VTPEKAIKLAANDFFR FFRHQLSKDGQKLTLL K L A S K D 2 1 1 1 0 1 0 0 1 0 2 1 0 2 0 1 0 0 0 0 0 13 1 1545.8052 E9PQ36;E9PI74;E9PS95;E9PJH7;Q9H936 E9PQ36 84 96 SLC25A22 Mitochondrial glutamate carrier 1 yes no 3 0.00022056 94.402 By matching By matching By matching By matching By matching By MS/MS 1 5859600 0 0 0 0 0 5859600 4107 443 4155 18460 12257 12257 1 LAANSDHLMQIQK ETIHEHNKLAANSDHL DHLMQIQKCELVLIHT K L A Q K C 2 0 1 1 0 2 0 0 1 1 2 1 1 0 0 1 0 0 0 0 0 13 0 1467.7504 B4DNK1;Q9NVM9;F8VRX9;F5H457 B4DNK1 88 100 ASUN Protein asunder homolog yes no 3 1.5426E-15 109.72 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 6971400 572990 1061900 1601900 730790 0 3003900 4108 110 4156 18461;18462;18463;18464;18465 12258;12259;12260;12261;12262 12260 5 LAANTLSTPSGSSLQRPK EMAKGEEKLAANTLST GSSLQRPKKSGDMTLI K L A P K K 2 1 1 0 0 1 0 1 0 0 3 1 0 0 2 4 2 0 0 0 0 18 1 1826.985 Q8NFC6 Q8NFC6 1089 1106 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 3 0.011024 79.393 By MS/MS By matching By matching By matching By matching By matching 1 0 0 0 0 0 0 0 4109 1325 4157 18466 12263 12263 1 LAAPSVSHVSPR QTSERANKLAAPSVSH SVSHVSPRKNPSVVIK K L A P R K 2 1 0 0 0 0 0 0 1 0 1 0 0 0 2 3 0 0 0 2 0 12 0 1219.6673 C9IZM8;B5MEB7;Q8WXE1-3;Q8WXE1-2;Q8WXE1 C9IZM8 122 133 ATRIP ATR-interacting protein yes no 3 0.025944 60.301 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 4110 176 4158 18467 12264 12264 1 LAARPYSATAAAATGGMANVK ALMLRQARLAARPYSA TGGMANVKAAPKIIDT R L A V K A 8 1 1 0 0 0 0 2 0 0 1 1 1 0 1 1 2 0 1 1 0 21 1 1991.0258 F2Z2T2;P23025 F2Z2T2 43 63 XPA DNA repair protein complementing XP-A cells yes no 3 8.7101E-23 98.292 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 13048000 2861700 1383700 1227000 780840 3184300 3610200 4111 475 4159 18468;18469;18470;18471;18472;18473 12265;12266 12265 2 LAASASTQQLQEVK LALRRSQRLAASASTQ TQQLQEVKAKLQQCKA R L A V K A 3 0 0 0 0 3 1 0 0 0 2 1 0 0 0 2 1 0 0 1 0 14 0 1472.7835 O95235;B4DL79 O95235 680 693 KIF20A Kinesin-like protein KIF20A yes no 2 1.1148E-21 103.11 By matching By matching By matching By matching By MS/MS By MS/MS 2 1 3725000 0 0 0 0 1054700 2670300 4112 767 4160 18474;18475;18476 12267;12268 12268 1 LAASASTQQLQEVKAK LALRRSQRLAASASTQ QLQEVKAKLQQCKAEL R L A A K L 4 0 0 0 0 3 1 0 0 0 2 2 0 0 0 2 1 0 0 1 0 16 1 1671.9155 O95235;B4DL79 O95235 680 695 KIF20A Kinesin-like protein KIF20A yes no 3 1.082E-26 109.1 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 11641000 2233800 0 2252500 2243500 2455000 2456400 4113 767 4161 18477;18478;18479;18480;18481 12269;12270;12271;12272;12273 12273 5 LAASEDHCSPSEETPSQSK EPETKRLKLAASEDHC EETPSQSKQIRTPLVE K L A S K Q 2 0 0 1 1 1 3 0 1 0 1 1 0 0 2 5 1 0 0 0 0 19 0 2058.88 F5H5E7;Q5FWF4-2;G8JLA0;Q5FWF4-3;F5GYN7;Q5FWF4 F5H5E7 45 63 ZRANB3 DNA annealing helicase and endonuclease ZRANB3;DNA annealing helicase ZRANB3;Endonuclease ZRANB3 yes no 3 0.00099838 58.864 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 3489900 0 652450 555390 411560 819010 1051500 4114 496 4162 18482;18483;18484;18485;18486 12274;12275;12276;12277 12275 4 LAAVVSACK DAQVDRSRLAAVVSAC AAVVSACKQLHRAGLL R L A C K Q 3 0 0 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 0 2 0 9 0 917.50044 P78527;E7EUY0;P78527-2 P78527 1448 1456 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.011764 82.645 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 38269000 0 4229000 4118100 0 10123000 19799000 4115 1012 4163 18487;18488;18489;18490 12278;12279;12280 12279 3 LACDVDQVTR RTFPVLLRLACDVDQV CDVDQVTRQLYEPLVM R L A T R Q 1 1 0 2 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 2 0 10 0 1175.5605 P78527;E7EUY0;P78527-2 P78527 972 981 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.0042247 88.134 By matching By matching By matching By matching By matching By MS/MS 1 1221400 0 0 0 0 0 1221400 4116 1012 4164 18491 12281 12281 1 LACPVCSK FNNAPPAKLACPVCSK LACPVCSKMVPRYDLN K L A S K M 1 0 0 0 2 0 0 0 0 0 1 1 0 0 1 1 0 0 0 1 0 8 0 933.44121 Q9Y2M0-2;Q9Y2M0;H3BQ24 Q9Y2M0-2 42 49 FAN1 Fanconi-associated nuclease 1 yes no 2 0.0084936 99.442 By matching By matching By MS/MS By matching By matching By matching 1 1863600 0 0 1863600 0 0 0 4117 1634 4165 18492 12282;12283 12283 2 LADALQELR KQREFESRLADALQEL ADALQELRAQHEDQVE R L A L R A 2 1 0 1 0 1 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 9 0 1027.5662 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCJ4;Q5TCI8;H0YAB0 P02545 241 249 LMNA Prelamin-A/C;Lamin-A/C yes no 2 1.4769E-06 114.86 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 2 1 47847000 0 4786900 8177600 3355500 0 31527000 4118 783 4166 18493;18494;18495;18496;18497 12284;12285;12286 12284 3 LADALQELRAQHEDQVEQYK KQREFESRLADALQEL EDQVEQYKKELEKTYS R L A Y K K 3 1 0 2 0 4 3 0 1 0 3 1 0 0 0 0 0 0 1 1 0 20 1 2383.1768 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCJ4;Q5TCI8;H0YAB0 P02545 241 260 LMNA Prelamin-A/C;Lamin-A/C yes no 3;4 3.8532E-47 110.77 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 2 1 2 166740000 0 41156000 27624000 19106000 1971600 76885000 4119 783 4167 18498;18499;18500;18501;18502;18503;18504;18505 12287;12288;12289;12290;12291;12292 12287 4 LADALQELRAQHEDQVEQYKK KQREFESRLADALQEL DQVEQYKKELEKTYSA R L A K K E 3 1 0 2 0 4 3 0 1 0 3 2 0 0 0 0 0 0 1 1 0 21 2 2511.2718 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCJ4;Q5TCI8;H0YAB0 P02545 241 261 LMNA Prelamin-A/C;Lamin-A/C yes no 4 0.02455 34.388 By MS/MS By matching By matching By matching By matching By matching 1 6125400 6125400 0 0 0 0 0 4120 783 4168 18506 12293 12293 1 LADDLSTLQEK EKEVRAQKLADDLSTL DLSTLQEKMAATSKEV K L A E K M 1 0 0 2 0 1 1 0 0 0 3 1 0 0 0 1 1 0 0 0 0 11 0 1231.6296 Q14980-2;Q14980 Q14980-2 898 908 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 7.1951E-08 109.39 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 33649000 6599600 9371000 0 541120 2296200 14841000 4121 1121 4169 18507;18508;18509;18510;18511 12294;12295;12296;12297;12298 12294 5 LADFGLAR INTEGAIKLADFGLAR LADFGLARAFGVPVRT K L A A R A 2 1 0 1 0 0 0 1 0 0 2 0 0 1 0 0 0 0 0 0 0 8 0 861.47085 P06493;E5RIU6;Q00526;F8VXD2;B3KX76;F8VYH9;B4DNF9;F8VZZ0;F8VTV8;F8VWX7;F8VZ51;H0YAZ9;P11802;Q00534;E7EUK8;Q96Q40-2;Q96Q40-4;E5RGN0;Q96Q40-3;O94921-3;F8W6H8;Q96Q40;F5H203;O94921-2;O94921;Q07002;Q07002-2;Q00536;Q07002-3;B7Z8T0;Q9NYV4-3;Q14004-2;Q9NYV4-2;Q9NYV4;Q14004;P50750;P50750-2;P24941-2;P24941;G3V5T9;E7ESI2;Q00535-2;Q00535;F5H6Z0;Q00537-2;Q00537 P24941-2 143 150 CDK1;CDK3;CDK4;CDK16;CDK6;CDK14;CDK15;CDK18;CDK12;CDK13;CDK9;CDK2;CDK5;CDK17 Cyclin-dependent kinase 1;Cyclin-dependent kinase 3;Cyclin-dependent kinase 4;Cyclin-dependent kinase 6;Cyclin-dependent kinase 15;Cyclin-dependent kinase 14;Cyclin-dependent kinase 18;Cyclin-dependent kinase 16;Cyclin-dependent kinase 12;Cyclin-dependent kinase 13;Cyclin-dependent kinase 9;Cyclin-dependent kinase 2;Cyclin-dependent kinase 5;Cyclin-dependent kinase 17 no no 2 0.0074874 101.33 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 19202000 0 3060300 4030400 922640 1621400 9566900 4122 589;799;949;1020;525 4170 18512;18513;18514;18515;18516 12299;12300 12299 2 LADMHSTEISLQQR NAARVLSRLADMHSTE TEISLQQRLEYIARAI R L A Q R L 1 1 0 1 0 2 1 0 1 1 2 0 1 0 0 2 1 0 0 0 0 14 0 1627.7988 E9PF10;O75694-2;B4DLT2;O75694 E9PF10 1037 1050 NUP155 Nuclear pore complex protein Nup155 yes no 2;3 2.9288E-55 127.78 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 1 1 2 31651000 374140 2622900 1565400 0 1637000 25452000 4123 100 4171 18517;18518;18519;18520;18521;18522;18523 12301;12302;12303 12301 2 LADPAVTDFPAGK KLMARYGRLADPAVTD VTDFPAGKGYPCKTCK R L A G K G 3 0 0 2 0 0 0 1 0 0 1 1 0 1 2 0 1 0 0 1 0 13 0 1300.6663 B7Z367;Q9UL40;D6RJ07;Q9UL40-2;B7Z4J8 B7Z367 193 205 ZNF346 Zinc finger protein 346 yes no 2 0.0011454 90.412 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 5119700 0 909480 3437900 0 772320 0 4124 184 4172 18524;18525;18526;18527 12304;12305;12306;12307 12306 4 LADSGDGAGPSPEEK TRTSARRRLADSGDGA AGPSPEEKDFLKTVEG R L A E K D 2 0 0 2 0 0 2 3 0 0 1 1 0 0 2 2 0 0 0 0 0 15 0 1428.6369 Q92917 Q92917 32 46 GPKOW G patch domain and KOW motifs-containing protein yes yes 2 1.7076E-13 103.79 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 4235100 531060 683680 813180 0 914280 1292900 4125 1364 4173 18528;18529;18530;18531;18532 12308;12309;12310;12311 12309 3 LAEALYIADR HINENFAKLAEALYIA EALYIADRKAREAVEM K L A D R K 3 1 0 1 0 0 1 0 0 1 2 0 0 0 0 0 0 0 1 0 0 10 0 1133.6081 Q13573;G3V3A4;G3V4X8 Q13573 287 296 SNW1 SNW domain-containing protein 1 yes no 2 0.033929 89.561 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 4126 583 4174 18533 12312 12312 1 LAEALYIADRK HINENFAKLAEALYIA ALYIADRKAREAVEMR K L A R K A 3 1 0 1 0 0 1 0 0 1 2 1 0 0 0 0 0 0 1 0 0 11 1 1261.703 Q13573;G3V3A4;G3V4X8 Q13573 287 297 SNW1 SNW domain-containing protein 1 yes no 2;3 0.00010661 107.34 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 3 2 28956000 3391400 3652600 4018900 1502900 2439000 13951000 4127 583 4175 18534;18535;18536;18537;18538;18539;18540;18541;18542;18543;18544;18545;18546 12313;12314;12315;12316;12317;12318;12319 12318 7 LAEALYIADRKAR HINENFAKLAEALYIA YIADRKAREAVEMRAQ K L A A R E 4 2 0 1 0 0 1 0 0 1 2 1 0 0 0 0 0 0 1 0 0 13 2 1488.8413 Q13573;G3V3A4;G3V4X8 Q13573 287 299 SNW1 SNW domain-containing protein 1 yes no 3 0.0043629 84.605 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 24514000 3296400 4319400 4261600 2851100 2569800 7215300 4128 583 4176 18547;18548;18549;18550;18551;18552 12320;12321;12322;12323 12321 4 LAEAPSAQPNQTQEK EAGDEKPKLAEAPSAQ QPNQTQEKQGQPKPEL K L A E K Q 3 0 1 0 0 3 2 0 0 0 1 1 0 0 2 1 1 0 0 0 0 15 0 1610.79 Q15911-2;Q15911 Q15911-2 1518 1532 ZFHX3 Zinc finger homeobox protein 3 yes no 2 0.00066871 74.649 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 9210100 0 1799300 3094800 1080600 1023000 2212400 4129 1150 4177 18553;18554;18555;18556;18557 12324;12325;12326;12327;12328;12329 12325 6 LAEEEDLFDSAHPEEGDLDLASESTAHAQSSK SSVGPDRKLAEEEDLF TAHAQSSKADSLLAVV K L A S K A 5 0 0 4 0 1 6 1 2 0 4 1 0 1 1 5 1 0 0 0 0 32 0 3427.5175 Q14151;A8MXT5;C9JPX0;Q15424;F5H1L1;F5H0H3;F5GZU3;B7Z2F6 Q14151 253 284 SAFB2;SAFB Scaffold attachment factor B2;Scaffold attachment factor B1 no no 4 5.7786E-41 88.481 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 160190000 0 30152000 0 107890000 22147000 0 4130 1097;1137 4178 18558;18559;18560 12330;12331;12332;12333 12331 4 LAEIGAPIQGNREELVER AAQELQAKLAEIGAPI NREELVERLQSYTRQT K L A E R L 2 2 1 0 0 1 4 2 0 2 2 0 0 0 1 0 0 0 0 1 0 18 1 1993.0593 Q13435;E9PPJ0;E9PJ04;H0YCG1;E9PJT3 Q13435 36 53 SF3B2 Splicing factor 3B subunit 2 yes no 3 0.0016405 58.079 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 22171000 0 14691000 0 0 0 7480000 4131 1083 4179 18561;18562 12334;12335 12335 2 LAELLTQQHGLQCR VRAAFQLRLAELLTQQ QQHGLQCRATATHTDV R L A C R A 1 1 0 0 1 3 1 1 1 0 4 0 0 0 0 0 1 0 0 0 0 14 0 1665.8621 Q9H6R4-4;Q9H6R4;Q9H6R4-2;G8JLK7;F5H6M7 Q9H6R4-4 762 775 NOL6 Nucleolar protein 6 yes no 2;3 3.8274E-86 140.31 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 2 1 1 1 2 75910000 15611000 6075100 6096400 2235200 2842800 43050000 4132 1497 4180 18563;18564;18565;18566;18567;18568;18569;18570;18571 12336;12337;12338;12339;12340;12341 12338 6 LAEPSQLLK GQATNLQRLAEPSQLL AEPSQLLKSAIVHLIN R L A L K S 1 0 0 0 0 1 1 0 0 0 3 1 0 0 1 1 0 0 0 0 0 9 0 997.5808 F5GWP8;C9JTX4;C9J826;C9JK18;C9JKY1;P14923 F5GWP8 116 124 JUP Junction plakoglobin yes no 2 0.010415 84.615 By matching By matching By matching By matching By matching By MS/MS 1 1517000 0 0 0 0 0 1517000 4133 485 4181 18572 12342;12343 12342 2 LAEPYGKIK YSDSAVLKLAEPYGKI AEPYGKIKNYILMRMK K L A I K N 1 0 0 0 0 0 1 1 0 1 1 2 0 0 1 0 0 0 1 0 0 9 1 1017.5859 P43243;A8MXP9;D6REM6;H0Y8T4;B3KM87;P43243-2 P43243 516 524 MATR3 Matrin-3 yes no 2 0.037209 78.113 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 6925400 387020 1000600 587720 326200 2136700 2487200 4134 52 4182 18573;18574;18575;18576;18577;18578 12344 12344 1 LAEQAERYDDMATCMK TELIQKAKLAEQAERY DDMATCMKAVTEQGAE K L A M K A 3 1 0 2 1 1 2 0 0 0 1 1 2 0 0 0 1 0 1 0 0 16 1 1930.8223 P27348;E9PG15 P27348 12 27 YWHAQ 14-3-3 protein theta yes no 3 0.0032743 53.946 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4338400 0 0 888690 0 1016000 2433700 4135 883 4183 18579;18580;18581 12345;12346 12346 2 LAESKPNENRLVETK EMKQSESRLAESKPNE ENRLVETKSSENKLET R L A T K S 1 1 2 0 0 0 3 0 0 0 2 2 0 0 1 1 1 0 0 1 0 15 2 1726.9214 Q6KC79-2;Q6KC79;Q6KC79-3 Q6KC79-2 620 634 NIPBL Nipped-B-like protein yes no 3;4 0.0016865 83.243 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 2 2 2 2 26675000 2081700 4492500 4560100 2531100 6399800 6609300 4136 1222 4184 18582;18583;18584;18585;18586;18587;18588;18589;18590;18591;18592;18593 12347;12348;12349;12350;12351 12348 5 LAEVQDSSMPVPAQPK NSPAPQGRLAEVQDSS MPVPAQPKAGGSGSYW R L A P K A 2 0 0 1 0 2 1 0 0 0 1 1 1 0 3 2 0 0 0 2 0 16 0 1695.8502 E9PL60;E9PII7;H0YDK3;H0YDE3;H0YDU2;E9PRI1;Q96NY9 E9PL60 33 48 MUS81 Crossover junction endonuclease MUS81 yes no 2 6.9345E-12 99.796 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 8333600 1637100 731880 2622400 0 1363200 1979000 4137 445 4185 18594;18595;18596;18597;18598 12352;12353;12354;12355 12352 4 LAEVQREAQSTAR VRADAETRLAEVQREA REAQSTARELEVMTAK R L A A R E 3 2 0 0 0 2 2 0 0 0 1 0 0 0 0 1 1 0 0 1 0 13 1 1457.7587 Q14980-2;Q14980;F5H2L0;H0YFY6;H0YH75 Q14980-2 1491 1503 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.004256 62.528 By matching By MS/MS By matching By matching By matching By matching 1 1 1 4066500 661740 1867400 0 0 1537400 0 4138 1121 4186 18599;18600;18601 12356 12356 1 LAGCTVFITGASR ________________ VFITGASRGIGKAIAL R L A S R G 2 1 0 0 1 0 0 2 0 1 1 0 0 1 0 1 2 0 0 1 0 13 0 1351.6918 Q6YN16-2;Q6YN16 Q6YN16-2 8 20 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes no 2 0.001367 89.46 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 28889000 7727700 3421700 0 1082900 2964500 13693000 4139 1239 4187 18602;18603;18604;18605;18606 12357;12358;12359;12360;12361 12358 2 LAGEELAGEEAPQEK EKEKAEEKLAGEELAG GEEAPQEKAEDKPSTD K L A E K A 3 0 0 0 0 1 5 2 0 0 2 1 0 0 1 0 0 0 0 0 0 15 0 1569.7522 Q7Z4V5-2;Q7Z4V5;I3L080 Q7Z4V5-2 575 589 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 2 0.0026954 64.04 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 5994600 656040 1398900 446790 0 914120 2578800 4140 1252 4188 18607;18608;18609;18610;18611 12362;12363 12362 2 LAGFELRK VTQGYQVKLAGFELRK LAGFELRKTQTSMSLG K L A R K T 1 1 0 0 0 0 1 1 0 0 2 1 0 1 0 0 0 0 0 0 0 8 1 932.54435 Q8NB16 Q8NB16 347 354 MLKL Mixed lineage kinase domain-like protein yes yes 2 0.037099 94.114 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 11898000 0 1749800 1772900 626860 2143700 5605000 4141 1314 4189 18612;18613;18614;18615;18616 12364 12364 1 LAIEAER IAQEIQEKLAIEAERR KLAIEAERRRIQEKKD K L A E R R 2 1 0 0 0 0 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 7 0 800.43922 Q8IVM0;Q8IVM0-2 Q8IVM0 95 101 CCDC50 Coiled-coil domain-containing protein 50 yes no 2 0.031992 85.359 By matching By MS/MS By matching By matching By matching By matching 1 1 1807600 0 436750 0 0 0 1370900 4142 1277 4190 18617;18618 12365 12365 1 LAIHNPNLPTTLPVNSQNIQPVRYNRR YAATIASKLAIHNPNL QPVRYNRRSNPDLEKR K L A R R S 1 3 5 0 0 2 0 0 1 2 3 0 0 0 4 1 2 0 1 2 0 27 2 3124.7006 A2TJX0;B4DL96;Q13887 A2TJX0 245 271 KLF5 Krueppel-like factor 5 yes no 4 1.1298E-09 63.674 By matching By matching By matching By matching By matching By MS/MS 1 31750000 0 0 0 0 0 31750000 4143 9 4191 18619 12366 12366 1 LALAGIGQPVK KKNEEFKKLALAGIGQ AGIGQPVKKSVSQVTK K L A V K K 2 0 0 0 0 1 0 2 0 1 2 1 0 0 1 0 0 0 0 1 0 11 0 1065.6546 Q9ULW0;Q96RR5 Q9ULW0 238 248 TPX2;HCA90 Targeting protein for Xklp2 yes no 2 2.5147E-20 122.96 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 120920000 24628000 17120000 13631000 6905100 0 58632000 4144 1611 4192 18620;18621;18622;18623;18624 12367;12368;12369;12370;12371;12372 12368 6 LALAGIGQPVKK KKNEEFKKLALAGIGQ GIGQPVKKSVSQVTKS K L A K K S 2 0 0 0 0 1 0 2 0 1 2 2 0 0 1 0 0 0 0 1 0 12 1 1193.7496 Q9ULW0;Q96RR5 Q9ULW0 238 249 TPX2;HCA90 Targeting protein for Xklp2 yes no 2 2.7425E-26 123.51 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 114350000 15593000 16365000 27674000 12922000 11585000 30211000 4145 1611 4193 18625;18626;18627;18628;18629;18630 12373;12374;12375;12376;12377;12378 12376 5 LALGQINIAK LYDKDHYKLALGQINI LGQINIAKNLVDNVAK K L A A K N 2 0 1 0 0 1 0 1 0 2 2 1 0 0 0 0 0 0 0 0 0 10 0 1039.639 Q9BZE4;B7Z7A3;Q5T3R7 Q9BZE4 94 103 GTPBP4 Nucleolar GTP-binding protein 1 yes no 2 5.9446E-115 159.28 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 4146 1471 4194 18631 12379 12379 1 LALKLHPDKNPNNPNAHGDFLK EIRQAFKKLALKLHPD NAHGDFLKINRAYEVL K L A L K I 2 0 4 2 0 0 0 1 2 0 4 3 0 1 3 0 0 0 0 0 0 22 2 2452.2975 Q8IXB1;Q8IXB1-2;F8W884;Q3B7W8;E7EP04;Q71S60 Q8IXB1 58 79 DNAJC10 DnaJ homolog subfamily C member 10 yes no 4 0.0019256 50.098 By MS/MS By matching By matching By matching By matching By matching 1 1 4040500 1804400 0 0 2236100 0 0 4147 1287 4195 18632;18633 12380 12380 1 LALSQNQQSSGAAGPTGK RIRRGHARLALSQNQQ GAAGPTGKNEEKIQVL R L A G K N 3 0 1 0 0 3 0 3 0 0 2 1 0 0 1 3 1 0 0 0 0 18 0 1713.8646 O95232;B4DJ96;F5H1W9;D6RDI2 O95232 107 124 LUC7L3 Luc7-like protein 3 yes no 2 0.0079047 43.946 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2805600 142190 281800 0 0 711910 1669700 4148 766 4196 18634;18635;18636;18637 12381 12381 1 LALSQNQQSSGAAGPTGKNEEK RIRRGHARLALSQNQQ PTGKNEEKIQVLTDKI R L A E K I 3 0 2 0 0 3 2 3 0 0 2 2 0 0 1 3 1 0 0 0 0 22 1 2214.0877 O95232;B4DJ96;F5H1W9;D6RDI2 O95232 107 128 LUC7L3 Luc7-like protein 3 yes no 3 0.0089511 40.645 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4189400 0 1066200 0 0 1429900 1693300 4149 766 4197 18638;18639;18640 12382 12382 1 LALSVGTDK LSIHPSGKLALSVGTD ALSVGTDKTLRTWNLV K L A D K T 1 0 0 1 0 0 0 1 0 0 2 1 0 0 0 1 1 0 0 1 0 9 0 902.5073 Q9NWT1 Q9NWT1 137 145 PAK1IP1 p21-activated protein kinase-interacting protein 1 yes yes 2 0.0065883 91.265 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 11379000 1319300 2039200 1864600 2124200 1605000 2426500 4150 1555 4198 18641;18642;18643;18644;18645;18646 12383;12384 12384 2 LANLINAEERR WTKTIEKKLANLINAE LINAEERRDVSLKDCM K L A R R D 2 2 2 0 0 0 2 0 0 1 2 0 0 0 0 0 0 0 0 0 0 11 1 1297.7102 P52701;B4DF41;F5H2F9;F5H769;P52701-2 P52701 1015 1025 MSH6 DNA mismatch repair protein Msh6 yes no 3 0.0065344 61.78 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4113800 205820 0 0 394530 0 3513400 4151 959 4199 18647;18648;18649 12385;12386 12386 2 LANLPEEVIQK SYGFNAARLANLPEEV LPEEVIQKGHRKAREF R L A Q K G 1 0 1 0 0 1 2 0 0 1 2 1 0 0 1 0 0 0 0 1 0 11 0 1252.7027 P52701;B4DF41;F5H2F9;F5H3S1 P52701 1305 1315 MSH6 DNA mismatch repair protein Msh6 yes no 2 1.3637E-29 126.03 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 97403000 16380000 24602000 14108000 3661600 7471000 31180000 4152 959 4200 18650;18651;18652;18653;18654;18655 12387;12388;12389;12390;12391 12387 5 LANNPDIVK AKACKVLRLANNPDIV ANNPDIVKVIKKIGHY R L A V K V 1 0 2 1 0 0 0 0 0 1 1 1 0 0 1 0 0 0 0 1 0 9 0 982.54475 Q9UQ84-4;Q9UQ84 Q9UQ84-4 244 252 EXO1 Exonuclease 1 yes no 2 0.018196 70.816 By matching By matching By matching By matching By matching By MS/MS 1 672620 0 0 0 0 0 672620 4153 1624 4201 18656 12392 12392 1 LANRAPEPTPQQVAQQQ SERNILSRLANRAPEP PQQVAQQQ________ R L A Q Q - 3 1 1 0 0 5 1 0 0 0 1 0 0 0 3 0 1 0 0 1 0 17 1 1874.9599 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1870 1886 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2;3 0.0025584 67.846 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 2 1 2 2 71254000 3072600 9661700 8014100 817130 4888300 44800000 4154 486 4202 18657;18658;18659;18660;18661;18662;18663;18664;18665 12393;12394;12395;12396;12397 12393 3 LANTAPAW RNTRRMRRLANTAPAW LANTAPAW________ R L A A W - 3 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 1 1 0 0 0 8 0 842.42865 Q12824-2;Q12824;G5E975;B5MCL5 Q12824-2 369 376 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes no 1 0.031324 44.611 By matching By matching By matching By matching By matching By MS/MS 1 1266900 0 0 0 0 0 1266900 4155 592 4203 18666 12398 12398 1 LANTCFNEIEK KGSLGAQKLANTCFNE TCFNEIEKQAQAADKM K L A E K Q 1 0 2 0 1 0 2 0 0 1 1 1 0 1 0 0 1 0 0 0 0 11 0 1337.6286 H0Y6A0;C9JZR4;E9PB03;Q9NP61 H0Y6A0 84 94 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes no 2 0.0064311 70.089 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 15142000 2598800 2754900 2133100 2007500 1815800 3832500 4156 276 4204 18667;18668;18669;18670;18671;18672 12399;12400;12401;12402;12403 12401 5 LAPAQYIRYTPSQQGVAFNSGAK MPVRAADKLAPAQYIR VAFNSGAKQRVIRMVE K L A A K Q 4 1 1 0 0 3 0 2 0 1 1 1 0 1 2 2 1 0 2 1 0 23 1 2466.2656 Q13573;G3V3A4;G3V4X8;E9PGQ7 Q13573 171 193 SNW1 SNW domain-containing protein 1 yes no 3 1.4258E-29 95.591 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 88955000 18201000 0 21054000 12794000 5553900 31352000 4157 583 4205 18673;18674;18675;18676;18677 12404;12405;12406;12407 12407 3 LAPDYDALDVANK GEKKAYVRLAPDYDAL DALDVANKIGII____ R L A N K I 3 0 1 3 0 0 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 13 0 1403.6933 P62750;H7BY10;A8MXA8;A8MUS3 P62750 140 152 RPL23A 60S ribosomal protein L23a yes no 2 0.00057624 92.856 By matching By MS/MS By matching By matching By matching By matching 1 5037100 0 5037100 0 0 0 0 4158 45 4206 18678 12408 12408 1 LAPQVHNTTSRELNVSK VAYPGIPKLAPQVHNT SRELNVSKIGSFAEPS K L A S K I 1 1 2 0 0 1 1 0 1 0 2 1 0 0 1 2 2 0 0 2 0 17 1 1893.0068 Q03164-2;Q03164;E9PQG7 Q03164-2 2293 2309 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 3;4 0.0041557 49.188 By matching By matching By matching By MS/MS By matching By matching 2 2 2 2 2 1 17043000 3737700 3211600 3368000 2705400 2618100 1402300 4159 464 4207 18679;18680;18681;18682;18683;18684;18685;18686;18687;18688;18689 12409;12410 12410 2 LAPVPSPEPQKPAPVSPESVK VPVCESQKLAPVPSPE PVSPESVKATLSNPKP K L A V K A 2 0 0 0 0 1 2 0 0 0 1 2 0 0 7 3 0 0 0 3 0 21 1 2153.1732 Q96JM3 Q96JM3 199 219 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.0014606 51.786 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 16371000 5623300 2056000 4886400 0 1336700 2468800 4160 1399 4208 18690;18691;18692;18693;18694 12411;12412;12413 12411 3 LAQAEAAGLHK VVKMTEEKLAQAEAAG AEAAGLHKVFKLQTTL K L A H K V 4 0 0 0 0 1 1 1 1 0 2 1 0 0 0 0 0 0 0 0 0 11 0 1107.6037 Q02880-2;Q02880;E9PCY5 Q02880-2 993 1003 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 2 7.0951E-06 106.16 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 11996000 486280 1587800 2404700 703560 1395700 5418200 4161 1035 4209 18695;18696;18697;18698;18699;18700 12414;12415;12416;12417 12415 4 LAQATQERTDLYAK KEERGIARLAQATQER ERTDLYAKQGRGSQFT R L A A K Q 3 1 0 1 0 2 1 0 0 0 2 1 0 0 0 0 2 0 1 0 0 14 1 1606.8315 Q9UQE7 Q9UQE7 365 378 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.0012784 70.438 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 10731000 376230 1913900 1423400 1208000 2441600 3367800 4162 1625 4210 18701;18702;18703;18704;18705;18706 12418 12418 1 LAQHVKPEEHEQVK ELENVKAKLAQHVKPE PEEHEQVKSRLEQKSG K L A V K S 1 0 0 0 0 2 3 0 2 0 1 2 0 0 1 0 0 0 0 2 0 14 1 1670.874 F5H2B9;H0YNH8;G3XAG2;Q9BZF9 F5H2B9 569 582 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes no 4 0.0028812 62.298 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 2669900 0 0 1075200 669080 0 925610 4163 512 4211 18707;18708;18709 12419;12420 12420 2 LAQKNPMYQKER DEDGLPEKLAQKNPMY NPMYQKERETPPRFAQ K L A E R E 1 1 1 0 0 2 1 0 0 0 1 2 1 0 1 0 0 0 1 0 0 12 2 1504.782 P23246;P23246-2;H0Y9K7 P23246 463 474 SFPQ Splicing factor, proline- and glutamine-rich yes no 3 0.0056544 83.137 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 9130200 1186200 1215900 2446800 1082000 1632500 1566700 4164 865 4212 18710;18711;18712;18713;18714;18715 12421;12422;12423;12424 12424 4 LAQLIATCPPSK GGTSVTEKLAQLIATC IATCPPSKSSKTKPKK K L A S K S 2 0 0 0 1 1 0 0 0 1 2 1 0 0 2 1 1 0 0 0 0 12 0 1297.7064 Q9NR48-2;Q9NR48 Q9NR48-2 220 231 ASH1L Histone-lysine N-methyltransferase ASH1L yes no 2 0.0017963 78.964 By matching By MS/MS By MS/MS By matching By matching By matching 2 1 1 2 4667100 0 1136600 673730 0 534420 2322300 4165 1535 4213 18716;18717;18718;18719;18720;18721 12425;12426;12427 12427 3 LAQQIKQEVR AVVISGRKLAQQIKQE QQIKQEVRQEVEEWVA K L A V R Q 1 1 0 0 0 3 1 0 0 1 1 1 0 0 0 0 0 0 0 1 0 10 1 1211.6986 B9A062;B8ZZU9;P13995 B9A062 45 54 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase yes no 3 0.0054033 86.882 By matching By matching By matching By matching By MS/MS By matching 1 171930 0 0 0 0 171930 0 4166 215 4214 18722 12428 12428 1 LAQQMENRPSVQAALK LASARNRRLAQQMENR PSVQAALKLKQSLKQR R L A L K L 3 1 1 0 0 3 1 0 0 0 2 1 1 0 1 1 0 0 0 1 0 16 1 1782.9411 Q9Y3Y2-4;Q9Y3Y2;Q9Y3Y2-3;Q5T7Y7 Q9Y3Y2-4 55 70 CHTOP Chromatin target of PRMT1 protein yes no 3 0.0019971 59.75 By matching By matching By matching By matching By matching By MS/MS 1 6186700 0 0 0 0 0 6186700 4167 1649 4215 18723 12429;12430 12429 2 LAQQQAAAAAAAAAAASQQGSAK RQQAYRDKLAQQQAAA ASQQGSAKNGENTANG K L A A K N 13 0 0 0 0 5 0 1 0 0 1 1 0 0 0 2 0 0 0 0 0 23 0 2054.0505 B7Z475;Q9BZK7;C9JLJ1;C9JCK0;C9JBN1;C9IYU9 B7Z475 16 38 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 yes no 2;3 7.2577E-55 111.6 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 56031000 0 23628000 12341000 2934600 0 17128000 4168 185 4216 18724;18725;18726;18727;18728 12431;12432;12433;12434;12435;12436 12434 6 LAQQQAALLMQQEER LSEEERLKLAQQQAAL LLMQQEERAKQQGDHS K L A E R A 3 1 0 0 0 5 2 0 0 0 3 0 1 0 0 0 0 0 0 0 0 15 0 1755.8938 Q13435;E9PPJ0;E9PJ04;H0YCG1;E9PJT3;E9PIL8;H0YDT7 Q13435 149 163 SF3B2 Splicing factor 3B subunit 2 yes no 2 7.5434E-21 110.22 By matching By MS/MS By matching By matching By matching By matching 1 2283300 0 2283300 0 0 0 0 4169 1083 4217 18729 12437 12437 1 LAQVQVQK YEISNRWKLAQVQVQK LAQVQVQKDSKEAVKK K L A Q K D 1 0 0 0 0 3 0 0 0 0 1 1 0 0 0 0 0 0 0 2 0 8 0 912.53927 Q01780;Q01780-2 Q01780 726 733 EXOSC10 Exosome component 10 yes no 2 0.0058315 107.59 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 10714000 0 2401900 5389200 537800 605720 1779400 4170 1030 4218 18730;18731;18732;18733;18734 12438;12439;12440 12440 3 LARASGNYATVISHNPETK EKPGDRGKLARASGNY ISHNPETKKTRVKLPS K L A T K K 3 1 2 0 0 0 1 1 1 1 1 1 0 0 1 2 2 0 1 1 0 19 1 2028.0389 E9PKZ0;P62917;G3V1A1;E9PIZ3 E9PKZ0 126 144 RPL8 60S ribosomal protein L8 yes no 3;4 0.0014017 55.536 By MS/MS By MS/MS By matching By MS/MS By matching By matching 2 1 1 2 1 22248000 13377000 2632500 1340900 3901100 996970 0 4171 456 4219 18735;18736;18737;18738;18739;18740;18741 12441;12442;12443;12444;12445 12442 5 LARFVAEGGPELEK ETRKVIEKLARFVAEG EGGPELEKVAMEDYKD K L A E K V 2 1 0 0 0 0 3 2 0 0 2 1 0 1 1 0 0 0 0 1 0 14 1 1514.8093 Q8IWZ8 Q8IWZ8 195 208 SUGP1 SURP and G-patch domain-containing protein 1 yes yes 3 0.0012299 84.62 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 18339000 4537800 4654300 3808800 2134000 0 3203700 4172 1283 4220 18742;18743;18744;18745;18746 12446;12447 12447 2 LARLEAQEQAFLAR LGITMKAKLARLEAQE QEQAFLARLKGQDPGA K L A A R L 4 2 0 0 0 2 2 0 0 0 3 0 0 1 0 0 0 0 0 0 0 14 1 1614.8842 Q5T3I0;Q5T3I0-3;E9PAV9;F8W895 Q5T3I0 171 184 GPATCH4 G patch domain-containing protein 4 yes no 3 1.9161E-20 111.66 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 36512000 6728300 0 14121000 0 2129200 13534000 4173 1191 4221 18747;18748;18749;18750 12448;12449;12450 12450 2 LASAQEVAGSTSAK ARSCSAARLASAQEVA VAGSTSAKTACLTSSS R L A A K T 4 0 0 0 0 1 1 1 0 0 1 1 0 0 0 3 1 0 0 1 0 14 0 1318.6729 Q8IYL3 Q8IYL3 26 39 C1orf174 UPF0688 protein C1orf174 yes yes 2 1.6071E-69 132.51 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 11592000 3696600 961230 967920 1375100 2816100 1775200 4174 1291 4222 18751;18752;18753;18754;18755;18756;18757 12451;12452;12453;12454;12455;12456;12457;12458;12459 12453 8 LASERNLFISCK PGRGQLQKLASERNLF RNLFISCKSSHDRCLE K L A C K S 1 1 1 0 1 0 1 0 0 1 2 1 0 1 0 2 0 0 0 0 0 12 1 1436.7446 P42166 P42166 270 281 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2;3 4.334E-26 120.55 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 2 3 2 1 283930000 451640 59489000 60168000 65972000 37356000 60498000 4175 913 4223 18758;18759;18760;18761;18762;18763;18764;18765;18766;18767;18768 12460;12461;12462;12463;12464;12465;12466 12466 7 LASLGDTASPLVK SRQPTGHKLASLGDTA DTASPLVKSVSCDGAL K L A V K S 2 0 0 1 0 0 0 1 0 0 3 1 0 0 1 2 1 0 0 1 0 13 0 1270.7133 B4DZN9;Q6P4F7 B4DZN9 671 683 ARHGAP11A Rho GTPase-activating protein 11A yes no 2 1.3654E-09 105.66 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 19100000 0 17640000 0 1459600 0 0 4176 147 4224 18769;18770 12467;12468 12468 2 LASQGDSISSQLGPIHPPPR GDQPESKKLASQGDSI GPIHPPPRTSMTEEYR K L A P R T 1 1 0 1 0 2 0 2 1 2 2 0 0 0 4 4 0 0 0 0 0 20 0 2056.0702 Q92945-2;Q92945;E7EP96 Q92945-2 123 142 KHSRP Far upstream element-binding protein 2 yes no 3 3.4127E-82 127.32 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 198340000 37395000 49150000 27239000 16682000 6766100 61106000 4177 1366 4225 18771;18772;18773;18774;18775;18776 12469;12470;12471;12472;12473;12474 12470 6 LASRAVAPPTPASK TDTSKSEKLASRAVAP APPTPASKRDCVKGSA K L A S K R 4 1 0 0 0 0 0 0 0 0 1 1 0 0 3 2 1 0 0 1 0 14 1 1364.7776 Q14781 Q14781 414 427 CBX2 Chromobox protein homolog 2 yes yes 3 0.0061821 54.898 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1508200 661720 0 0 846470 0 0 4178 1114 4226 18777;18778 12475;12476 12476 2 LASSELER SDTGASLKLASSELER LASSELERLIVPNSNG K L A E R L 1 1 0 0 0 0 2 0 0 0 2 0 0 0 0 2 0 0 0 0 0 8 0 903.46616 P17275 P17275 82 89 JUNB Transcription factor jun-B yes yes 2 0.0091649 101.72 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 6601200 0 1926300 2410300 0 2264600 0 4179 848 4227 18779;18780;18781 12477;12478;12479 12478 3 LASTIADNQEQDLEK TVENLTAKLASTIADN NQEQDLEKTRQYSQKL K L A E K T 2 0 1 2 0 2 2 0 0 1 2 1 0 0 0 1 1 0 0 0 0 15 0 1673.8108 Q96R06;E9PMD0 Q96R06 852 866 SPAG5 Sperm-associated antigen 5 yes no 2 0.019141 42.958 By matching By MS/MS By matching By matching By matching By matching 1 617310 0 617310 0 0 0 0 4180 1416 4228 18782 12480 12480 1 LASTNSSVLGADLPSSMKEK ETAKATPRLASTNSSV LPSSMKEKAKAETEKA R L A E K A 2 0 1 1 0 0 1 1 0 0 3 2 1 0 1 5 1 0 0 1 0 20 1 2034.0303 Q13428-7;E7ETY2;Q13428-6;Q13428-5;H0YA99;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 105 124 TCOF1 Treacle protein no no 3 0 205.65 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 258940000 57029000 156060000 0 34318000 11533000 0 4181 1082;383 4229 18783;18784;18785;18786 12481;12482;12483;12484;12485 12483 5 LASTNSSVLGADLPSSMKEKAK ETAKATPRLASTNSSV SSMKEKAKAETEKAGK R L A A K A 3 0 1 1 0 0 1 1 0 0 3 3 1 0 1 5 1 0 0 1 0 22 2 2233.1624 Q13428-7;E7ETY2;Q13428-6;Q13428-5;H0YA99;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 105 126 TCOF1 Treacle protein no no 3;4 1.6756E-06 66.777 By MS/MS By matching By matching By matching By matching By MS/MS 2 1 1 1 44688000 30339000 3905800 0 4469600 0 5974600 4182 1082;383 4230 18787;18788;18789;18790;18791 12486;12487;12488;12489 12488 4 LASTPFKGGTLFGGEVCK INLASKNKLASTPFKG LFGGEVCKVIKKRGNK K L A C K V 1 0 0 0 1 0 1 4 0 0 2 2 0 2 1 1 2 0 0 1 0 18 1 1867.9502 P42166 P42166 668 685 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2;3 1.9757E-271 173.51 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 1 2 2 1378500000 269440000 287170000 0 140910000 136690000 544280000 4183 913 4231 18792;18793;18794;18795;18796;18797;18798;18799;18800 12490;12491;12492;12493;12494;12495;12496;12497;12498 12493 9 LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK VIAQGIGKLASVPAGG APAAAEEKKDEKKEES K L A E K K 14 0 0 0 0 0 2 4 0 0 1 1 0 0 4 4 0 0 0 3 0 33 0 2773.4246 H0YDD8;P05387 H0YDD8 39 71 RPLP2 60S acidic ribosomal protein P2 yes no 3 5.0329E-08 47.162 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 34716000 10679000 18891000 0 3026000 2120700 0 4184 616 4232 18801;18802;18803;18804 12499;12500;12501;12502 12500 4 LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKK VIAQGIGKLASVPAGG PAAAEEKKDEKKEESE K L A K K D 14 0 0 0 0 0 2 4 0 0 1 2 0 0 4 4 0 0 0 3 0 34 1 2901.5196 H0YDD8;P05387 H0YDD8 39 72 RPLP2 60S acidic ribosomal protein P2 yes no 3 1.0464E-51 83.939 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 29855000 14080000 0 0 0 1230300 14545000 4185 616 4233 18805;18806;18807 12503;12504;12505 12503 3 LASVPEYR HDPEFGSKLASVPEYR LASVPEYRYSQSAPGS K L A Y R Y 1 1 0 0 0 0 1 0 0 0 1 0 0 0 1 1 0 0 1 1 0 8 0 933.49198 P85037;P85037-2;F5H8G8;I3L0E1 P85037 457 464 FOXK1 Forkhead box protein K1 yes no 2 0.0091649 101.72 By matching By matching By matching By matching By MS/MS By MS/MS 1 2 1 52311000 0 0 979920 0 48432000 2899600 4186 1017 4234 18808;18809;18810;18811 12506;12507;12508 12506 3 LASYLDK TMQELNSRLASYLDKV RLASYLDKVQALEEAN R L A D K V 1 0 0 1 0 0 0 0 0 0 2 1 0 0 0 1 0 0 1 0 0 7 0 808.43307 P35527;CON__P35527;Q99456;CON__Q99456;P13645;CON__P13645;CON__P08730-1;CON__A2A4G1;C9JM50;P08727;CON__P08727;CON__P19001;CON__P05784;P19012;CON__P19012;P02533;CON__P02533;Q04695;CON__Q04695;H9KV34;A8MW45;CON__Q9QWL7;F5H7G6;C9JH30;P08779;CON__P08779 P35527 164 170 KRT9;KRT12;KRT10;KRT19;KRT15;KRT14;KRT17;KRT16 Keratin, type I cytoskeletal 9;Keratin, type I cytoskeletal 12;Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 19;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 16 no no 1;2 0.0060524 95.352 By matching By matching By MS/MS By matching By MS/MS By matching 2 2 29827000 0 0 22571000 0 7255300 0 + 4187 899;298;286;304;297 4235 18812;18813;18814;18815 12509;12510;12511 12509 3 LATNTSAPDLK STTPRLSRLATNTSAP NTSAPDLKNVRSKVGS R L A L K N 2 0 1 1 0 0 0 0 0 0 2 1 0 0 1 1 2 0 0 0 0 11 0 1129.5979 E7EVA0;P27816-6;P27816;P27816-2;P27816-4;E9PGM5;P27816-5;B9ZVR1;H0Y2V1;B4DSQ1;F8W9U4;H7C4C5;B5MEG9 E7EVA0 2068 2078 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.00052145 95.618 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 15317000 3580700 1173500 0 2162100 5014700 3386100 4188 388 4236 18816;18817;18818;18819;18820;18821 12512;12513;12514;12515;12516;12517 12517 6 LATNTSAPDLKNVR STTPRLSRLATNTSAP APDLKNVRSKVGSTEN R L A V R S 2 1 2 1 0 0 0 0 0 0 2 1 0 0 1 1 2 0 0 1 0 14 1 1498.8104 E7EVA0;P27816-6;P27816;P27816-2;P27816-4;E9PGM5;P27816-5;B9ZVR1;H0Y2V1;B4DSQ1;F8W9U4;H7C4C5;B5MEG9 E7EVA0 2068 2081 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 6.2525E-70 136.24 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 3 2 68365000 11430000 8845200 10477000 9513400 13439000 14661000 4189 388 4237 18822;18823;18824;18825;18826;18827;18828;18829;18830;18831;18832;18833;18834;18835 12518;12519;12520;12521;12522;12523;12524;12525 12522 8 LATQLTGPVMPVRNVYK DSSAEELKLATQLTGP MPVRNVYKKEKARVIT K L A Y K K 1 1 1 0 0 1 0 1 0 0 2 1 1 0 2 0 2 0 1 3 0 17 1 1886.0448 P26373;F5H1S2 P26373 146 162 RPL13 60S ribosomal protein L13 yes no 3 6.8374E-20 96.707 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 30764000 23365000 7399800 0 0 0 0 4190 880 4238 18836;18837 12526;12527 12526 1 LATSPGASSK L A S K 2 0 0 0 0 0 0 1 0 0 1 1 0 0 1 3 1 0 0 0 0 10 0 917.48181 REV__Q96CB8 yes yes 2 0.0061752 85.862 By MS/MS By matching By matching By matching By matching By matching 2 1 4840900 3458100 1382800 0 0 0 0 + 4191 1680 4239 18838;18839;18840 12528 12528 1 LATTILQHWK NQKHQGLKLATTILQH TTILQHWKKCDSWWAK K L A W K K 1 0 0 0 0 1 0 0 1 1 2 1 0 0 0 0 2 1 0 0 0 10 0 1209.687 P78527;E7EUY0;P78527-2 P78527 1618 1627 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2;3 0 209.6 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 2 178990000 0 18351000 38620000 0 33891000 88130000 4192 1012 4240 18841;18842;18843;18844;18845;18846 12529;12530;12531;12532;12533;12534 12531 6 LATTILQHWKK NQKHQGLKLATTILQH TILQHWKKCDSWWAKD K L A K K C 1 0 0 0 0 1 0 0 1 1 2 2 0 0 0 0 2 1 0 0 0 11 1 1337.782 P78527;E7EUY0;P78527-2 P78527 1618 1628 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 1.3862E-07 111.63 By matching By matching By matching By matching By matching By MS/MS 1 2746300 0 0 0 0 0 2746300 4193 1012 4241 18847 12535 12535 1 LATTTTDTSSVPK IMELVLGKLATTTTDT TDTSSVPKHGIRRKLI K L A P K H 1 0 0 1 0 0 0 0 0 0 1 1 0 0 1 2 5 0 0 1 0 13 0 1320.6773 Q4W8S1;F5GWX1;E9PGL3;E7ER26;F6QQW4;E9PF37;E9PDJ6;P57071 Q4W8S1 322 334 ZNF298;PRDM15 PR domain zinc finger protein 15 yes no 2 0.0065897 59.116 By matching By matching By matching By matching By MS/MS By matching 1 670860 0 0 0 0 670860 0 4194 366 4242 18848 12536 12536 1 LAVDTFPAR SSAEATGKLAVDTFPA AVDTFPARVIKHRAAF K L A A R V 2 1 0 1 0 0 0 0 0 0 1 0 0 1 1 0 1 0 0 1 0 9 0 988.53418 Q9HC52 Q9HC52 275 283 CBX8 Chromobox protein homolog 8 yes yes 2 0.011026 83.783 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 6701900 154650 1107300 0 407410 1005500 4027100 4195 1519 4243 18849;18850;18851;18852;18853 12537 12537 1 LAVDTFPARVIK SSAEATGKLAVDTFPA TFPARVIKHRAAFLEA K L A I K H 2 1 0 1 0 0 0 0 0 1 1 1 0 1 1 0 1 0 0 2 0 12 1 1328.7816 Q9HC52 Q9HC52 275 286 CBX8 Chromobox protein homolog 8 yes yes 3 0.0013621 91.469 By matching By matching By matching By matching By matching By MS/MS 1 24996000 0 0 0 0 0 24996000 4196 1519 4244 18854 12538 12538 1 LAVDTFPARVIKHR SSAEATGKLAVDTFPA PARVIKHRAAFLEAKG K L A H R A 2 2 0 1 0 0 0 0 1 1 1 1 0 1 1 0 1 0 0 2 0 14 2 1621.9416 Q9HC52 Q9HC52 275 288 CBX8 Chromobox protein homolog 8 yes yes 4 0.029375 40.767 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 3957700 0 1023300 1537500 742390 654490 0 4197 1519 4245 18855;18856;18857;18858 12539 12539 1 LAVNCQAEATPLTLK ENQCQHIKLAVNCQAE EATPLTLKSSVLNAMQ K L A L K S 3 0 1 0 1 1 1 0 0 0 3 1 0 0 1 0 2 0 0 1 0 15 0 1627.8603 Q9NWW7;C9JZF3;C9JJF4 Q9NWW7 138 152 C2orf42 Uncharacterized protein C2orf42 yes no 2 2.4817E-13 102.29 By matching By MS/MS By matching By matching By matching By matching 1 4422400 0 4422400 0 0 0 0 4198 1557 4246 18859 12540 12540 1 LAVNMVPFPR QLNADLRKLAVNMVPF VNMVPFPRLHFFMPGF K L A P R L 1 1 1 0 0 0 0 0 0 0 1 0 1 1 2 0 0 0 0 2 0 10 0 1142.627 P68371;E7EWR1;Q5ST81;F5H8C9;Q9BVA1;Q13885;F5H894;B4DFH6;B4DJ43;P04350;F5H0I4;A8K854;C9JAA5;Q5SQY0;Q3ZCM7;Q13509;B3KS31;I3L2F9;A6NNZ2;A6NKZ8;Q9H4B7;CON__ENSEMBL:ENSBTAP00000025008;F8VUJ7;Q5JP53;F8VYX6;F8VW92;P07437 P68371 253 262 TUBB4B;TUBB;TUBB2B;TUBB2A;TUBB4A;TUBB8;TUBB3;TUBB6;TUBB1 Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4A chain;Tubulin beta-8 chain;Tubulin beta-3 chain;Tubulin beta-8 chain-like protein LOC260334;Putative tubulin beta chain-like protein ENSP00000290377;Tubulin beta-1 chain;Tubulin beta chain no no 2 1.8762E-19 138.98 By matching By matching By MS/MS By matching By matching By matching 1 27515000 0 0 27515000 0 0 0 4199 1007;542 4247 18860 12541 12541 0 LAYMELQQK SVEVETQKLAYMELQQ AYMELQQKAEFSDQKH K L A Q K A 1 0 0 0 0 2 1 0 0 0 2 1 1 0 0 0 0 0 1 0 0 9 0 1122.5743 P49454 P49454 698 706 CENPF Centromere protein F yes yes 2 0.029566 64.711 By matching By matching By matching By matching By matching By MS/MS 1 852450 0 0 0 0 0 852450 4200 936 4248 18861 12542 12542 1 LCAMVADNPSYNTK CLLREFRKLCAMVADN DNPSYNTKTQIIQDFL K L C T K T 2 0 2 1 1 0 0 0 0 0 1 1 1 0 1 1 1 0 1 1 0 14 0 1582.712 P49916-2;P49916 P49916-2 269 282 LIG3 DNA ligase 3 yes no 2 0.0013395 83.087 By MS/MS By matching By matching By matching By MS/MS By MS/MS 2 1 1 1 1 1 7540900 1170500 719890 784070 949720 2016800 1900000 4201 947 4249 18862;18863;18864;18865;18866;18867;18868 12543;12544;12545 12543 3 LCCLHKPGGSGLTGAK IVMDEEGKLCCLHKPG GSGLTGAKLQDCMSRA K L C A K L 1 0 0 0 2 0 0 4 1 0 3 2 0 0 1 1 1 0 0 0 0 16 1 1654.8283 Q5JXM0;Q96B26 Q5JXM0 204 219 DKFZp564C0482;EXOSC8 Exosome complex component RRP43 yes no 3;4 0.0029202 55.335 By matching By matching By matching By matching By matching By MS/MS 2 2 2 2 2 17454000 0 1859000 1870200 1078200 3506200 9140500 4202 1184 4250 18869;18870;18871;18872;18873;18874;18875;18876;18877;18878 12546;12547 12547 2 LCDASFSSPAVAQAHYQGK ATENDYCKLCDASFSS AQAHYQGKNHAKRLRL K L C G K N 4 0 0 1 1 2 0 1 1 0 1 1 0 1 1 3 0 0 1 1 0 19 0 2035.9422 Q9HA38-2;Q9HA38 Q9HA38-2 151 169 ZMAT3 Zinc finger matrin-type protein 3 yes no 3 1.0887E-10 92.8 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5341600 0 1069800 1951700 611650 0 1708400 4203 1510 4251 18879;18880;18881;18882 12548;12549 12549 2 LCECSFNDPNAK KVIRFHCKLCECSFND SFNDPNAKEMHLKGRR K L C A K E 1 0 2 1 2 0 1 0 0 0 1 1 0 1 1 1 0 0 0 0 0 12 0 1453.5966 Q96KR1;B5MEH6 Q96KR1 586 597 ZFR Zinc finger RNA-binding protein yes no 2 2.3384E-140 160.86 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 326040000 78694000 51179000 47199000 35899000 52544000 60524000 4204 1403 4252 18883;18884;18885;18886;18887;18888;18889 12550;12551;12552;12553;12554;12555;12556;12557;12558;12559 12558 10 LCEDQNGNPYVK QRKRQTLRLCEDQNGN QNGNPYVKDLNWIHVQ R L C V K D 0 0 2 1 1 1 1 1 0 0 1 1 0 0 1 0 0 0 1 1 0 12 0 1435.6402 O95235;B4DL79 O95235 331 342 KIF20A Kinesin-like protein KIF20A yes no 2 0.039705 44.564 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1878300 0 596350 0 0 411780 870150 4205 767 4253 18890;18891;18892 12560 12560 1 LCELQPEEK GSGVGVKKLCELQPEE CELQPEEKCCVVGTLF K L C E K C 0 0 0 0 1 1 3 0 0 0 2 1 0 0 1 0 0 0 0 0 0 9 0 1144.5434 C9IZD2;C9J8Z7;C9JLE1;F8W8R3;P49005 C9IZD2 82 90 POLD2 DNA polymerase delta subunit 2 yes no 2 3.3183E-19 125.71 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 3061600 0 622870 990980 157460 394540 895760 4206 221 4254 18893;18894;18895;18896;18897 12561 12561 1 LCFSTAQHAS GPYPYTLKLCFSTAQH FSTAQHAS________ K L C A S - 2 0 0 0 1 1 0 0 1 0 1 0 0 1 0 2 1 0 0 0 0 10 0 1120.4971 P14866;A6NIT8 P14866 580 589 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 2 6.0313E-77 148.94 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 2 917760000 139980000 156010000 117080000 101140000 157460000 246080000 4207 838 4255 18898;18899;18900;18901;18902;18903;18904;18905 12562;12563;12564;12565;12566;12567 12563 6 LCFSTSSHL GSNPYTLKLCFSTSSH CFSTSSHL________ K L C H L - 0 0 0 0 1 0 0 0 1 0 2 0 0 1 0 3 1 0 0 0 0 9 0 1050.4804 Q8WVV9-4;C9J9G0;Q8WVV9;Q5JB52;B7WPG3 Q8WVV9-4 529 537 HNRNPLL;HNRPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 2 6.8504E-12 122.18 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 64943000 13446000 10410000 11196000 2855500 4961200 22074000 4208 236 4256 18906;18907;18908;18909;18910;18911 12568;12569;12570;12571;12572;12573 12572 6 LCHEGDCGPCSR DFIHTCEKLCHEGDCG GDCGPCSRTSVISCRC K L C S R T 0 1 0 1 3 0 1 2 1 0 1 0 0 0 1 1 0 0 0 0 0 12 0 1446.5439 Q12986;Q12986-2;F5GXD0;Q12986-3 Q12986 644 655 NFX1 Transcriptional repressor NF-X1 yes no 3 0.023896 48.115 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 3530500 375810 907070 1481600 0 0 766050 4209 1066 4257 18912;18913;18914;18915 12574 12574 1 LCNDHEVLTFIK VTEETFTKLCNDHEVL HEVLTFIKYKVFDAKP K L C I K Y 0 0 1 1 1 0 1 0 1 1 2 1 0 1 0 0 1 0 0 1 0 12 0 1487.7442 Q8WVV9-4;C9J9G0;Q8WVV9;Q5JB52;B7WPG3;H7C0J6;H7C464 Q8WVV9-4 468 479 HNRNPLL;HNRPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 3 5.3141E-119 160.52 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 17982000 0 0 0 0 0 17982000 4210 236 4258 18916;18917 12575;12576 12575 2 LCNDHEVLTFIKYK VTEETFTKLCNDHEVL VLTFIKYKVFDAKPSA K L C Y K V 0 0 1 1 1 0 1 0 1 1 2 2 0 1 0 0 1 0 1 1 0 14 1 1778.9025 Q8WVV9-4;C9J9G0;Q8WVV9;Q5JB52;B7WPG3;H7C0J6;H7C464 Q8WVV9-4 468 481 HNRNPLL;HNRPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 4 0.0011517 77.24 By matching By matching By matching By matching By matching By MS/MS 1 100560000 0 0 0 0 0 100560000 4211 236 4259 18918 12577 12577 1 LCNIFSTK GRNGYGAKLCNIFSTK LCNIFSTKFTVETACK K L C T K F 0 0 1 0 1 0 0 0 0 1 1 1 0 1 0 1 1 0 0 0 0 8 0 981.49535 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5;Q02880-2;Q02880;E9PCY5 Q02880-2 185 192 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta;DNA topoisomerase 2 no no 2 0.007944 104.06 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 75340000 0 14662000 20052000 6646400 1316100 32662000 4212 1035;655 4260 18919;18920;18921;18922;18923 12578 12578 1 LCNVTLNSAQQAQAHYQGK LCKPLYCKLCNVTLNS AQAHYQGKNHGKKLRN K L C G K N 3 0 2 0 1 4 0 1 1 0 2 1 0 0 0 1 1 0 1 1 0 19 0 2130.0276 Q9HA38-2;Q9HA38;C9J8H5 Q9HA38-2 74 92 ZMAT3 Zinc finger matrin-type protein 3 yes no 3 0.0012354 53.504 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 4632100 0 1075400 1043100 779190 0 1734400 4213 1510 4261 18924;18925;18926;18927;18928 12579;12580;12581 12581 3 LCQALAINK ELCSGPSKLCQALAIN CQALAINKSFDQRDLA K L C N K S 2 0 1 0 1 1 0 0 0 1 2 1 0 0 0 0 0 0 0 0 0 9 0 1029.5641 G5E9E2;Q5J9I4;P29372-2;P29372;A2IDA3 G5E9E2 204 212 MPG DNA-3-methyladenine glycosylase yes no 2 0.0061761 99.442 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 363160000 15623000 71899000 49037000 33880000 53971000 138750000 4214 594 4262 18929;18930;18931;18932;18933;18934 12582;12583;12584;12585;12586;12587 12586 6 LCQALAINKSFDQR ELCSGPSKLCQALAIN INKSFDQRDLAQDEAV K L C Q R D 2 1 1 1 1 2 0 0 0 1 2 1 0 1 0 1 0 0 0 0 0 14 1 1662.8512 G5E9E2;Q5J9I4;P29372-2;P29372;A2IDA3 G5E9E2 204 217 MPG DNA-3-methyladenine glycosylase yes no 2;3 1.5145E-12 101.43 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 1 2 1 2 118840000 48112000 24289000 29923000 6328200 2137500 8053000 4215 594 4263 18935;18936;18937;18938;18939;18940;18941;18942;18943;18944 12588;12589;12590;12591;12592;12593;12594;12595;12596 12595 9 LCQDLPCFSR LRDFVLVKLCQDLPCF QDLPCFSREKLMQGFN K L C S R E 0 1 0 1 2 1 0 0 0 0 2 0 0 1 1 1 0 0 0 0 0 10 0 1294.5798 O14929-2;O14929 O14929-2 208 217 HAT1 Histone acetyltransferase type B catalytic subunit yes no 2 5.6374E-15 119.27 By matching By matching By matching By matching By matching By MS/MS 1 1 5895000 0 561880 0 0 0 5333100 4216 697 4264 18945;18946 12597;12598 12597 2 LCSAHGVLVPGGFGVRGTEGK RYHEAWQKLCSAHGVL GVRGTEGKIQAIAWAR K L C G K I 1 1 0 0 1 0 1 6 1 0 2 1 0 1 1 1 1 0 0 3 0 21 1 2097.0789 P17812;B4DR64 P17812 361 381 CTPS1 CTP synthase 1 yes no 3;4 7.1203E-135 142.72 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 2 2 204110000 43631000 0 49036000 0 18536000 92910000 4217 852 4265 18947;18948;18949;18950;18951;18952 12599;12600;12601;12602;12603;12604 12601 6 LCSDACFSK NYQNVVHKLCSDACFS CSDACFSKFRSANNLT K L C S K F 1 0 0 1 2 0 0 0 0 0 1 1 0 1 0 2 0 0 0 0 0 9 0 1086.4474 Q5VZL5-2;Q5VZL5;H7C1I7;Q5VZL5-3;Q5VZL5-4 Q5VZL5-2 466 474 ZMYM4 Zinc finger MYM-type protein 4 yes no 2 0.016747 72.607 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1776800 0 0 469640 199140 356760 751290 4218 1213 4266 18953;18954;18955;18956 12605 12605 1 LCSLFYTNEEVAK PKTGFYCKLCSLFYTN YTNEEVAKNTHCSSLP K L C A K N 1 0 1 0 1 0 2 0 0 0 2 1 0 1 0 1 1 0 1 1 0 13 0 1572.7494 P43243;A8MXP9;B3KM87;P43243-2;Q68E03 P43243 805 817 MATR3;DKFZp686L22104 Matrin-3 yes no 2 5.3455E-110 151.7 By matching By matching By matching By MS/MS By matching By matching 1 40491000 0 0 0 40491000 0 0 4219 52 4267 18957 12606 12606 1 LCSLFYTNEEVAKNTHCSSLPHYQK PKTGFYCKLCSLFYTN SSLPHYQKLKKFLNKL K L C Q K L 1 0 2 0 2 1 2 0 2 0 3 2 0 1 1 3 2 0 2 1 0 25 1 3025.4062 P43243;A8MXP9;B3KM87;P43243-2;Q68E03 P43243 805 829 MATR3;DKFZp686L22104 Matrin-3 yes no 5 0.014358 44.541 By matching By matching By matching By MS/MS By matching By matching 1 14450000 0 0 0 14450000 0 0 4220 52 4268 18958 12607 12607 1 LCSSAETLESHPDIGK MKRRRRAKLCSSAETL ESHPDIGKSTPQKTAE K L C G K S 1 0 0 1 1 0 2 1 1 1 2 1 0 0 1 3 1 0 0 0 0 16 0 1742.8145 O96028-5;O96028-3;O96028;O96028-6 O96028-5 405 420 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 2;3 6.2427E-64 125.36 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 1 3 65899000 10432000 11840000 11220000 6778800 8124900 17503000 4221 779 4269 18959;18960;18961;18962;18963;18964;18965;18966;18967;18968;18969 12608;12609;12610;12611;12612;12613;12614;12615;12616;12617 12613 9 LCTVNSVEEK QNEVRVLRLCTVNSVE TVNSVEEKILAAAKYK R L C E K I 0 0 1 0 1 0 2 0 0 0 1 1 0 0 0 1 1 0 0 2 0 10 0 1177.5649 P51531-2;P51531;P51532-5;P51532-2;P51532-3;P51532-4;P51532;Q9HBD4;F5H0X5 P51532-5 1204 1213 SMARCA2;SMARCA4 Probable global transcription activator SNF2L2;Transcription activator BRG1 no no 2 0.0096339 75.416 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 6330000 0 0 756520 355910 1516900 3700600 4222 952;951 4270 18970;18971;18972;18973 12618;12619 12618 2 LCVLHEKTPVSEK YLSLILNRLCVLHEKT EKTPVSEKVTKCCTES R L C E K V 0 0 0 0 1 0 2 0 1 0 2 2 0 0 1 1 1 0 0 2 0 13 1 1538.8127 CON__P02769 CON__P02769 483 495 yes yes 3 1.5812E-24 117.93 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 2 36439000 4664700 5130400 4079200 6796200 3719600 12049000 + 4223 294 4271 18974;18975;18976;18977;18978;18979;18980;18981;18982 12620;12621;12622;12623;12624;12625 12622 6 LCYGLNMDFVDPAQITMK KITSRIQKLCYGLNMD DPAQITMKVIQGLYSG K L C M K V 1 0 1 2 1 1 0 1 0 1 2 1 2 1 1 0 1 0 1 1 0 18 0 2114.9839 P23921;H0YFI0 P23921 25 42 RRM1 Ribonucleoside-diphosphate reductase large subunit yes no 2 1.1193E-13 96.143 By matching By matching By matching By matching By matching By MS/MS 1 33741000 0 0 0 0 0 33741000 4224 870 4272 18983 12626 12626 1 LCYIGAGDEEK LVCGSKVKLCYIGAGD IGAGDEEKRSDSISIC K L C E K R 1 0 0 1 1 0 2 2 0 1 1 1 0 0 0 0 0 0 1 0 0 11 0 1253.5598 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 352 362 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 2 0.024289 53.211 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 7082000 387220 0 1362000 473540 1566300 3292900 4225 1404 4273 18984;18985;18986;18987;18988 12627 12627 1 LDAEDVIGSR FKQPAKRKLDAEDVIG AEDVIGSRRQPRAPKE K L D S R R 1 1 0 2 0 0 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 10 0 1073.5353 P46013;F5H4V4;P46013-2 P46013 2893 2902 MKI67 Antigen KI-67 no no 2 8.4932E-09 113.44 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 85260000 8243400 11154000 16483000 3324600 1521200 44534000 4226 919;920 4274 18989;18990;18991;18992;18993;18994 12628;12629;12630;12631;12632;12633;12634 12630 7 LDAEDVIGSRR FKQPAKRKLDAEDVIG EDVIGSRRQPRAPKEK K L D R R Q 1 2 0 2 0 0 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 11 1 1229.6364 P46013;F5H4V4;P46013-2 P46013 2893 2903 MKI67 Antigen KI-67 no no 3 0.0041574 67.704 By matching By matching By matching By matching By matching By MS/MS 1 698570 0 0 0 0 0 698570 4227 919;920 4275 18995 12635 12635 1 LDAEDVIGSRRQPR FKQPAKRKLDAEDVIG IGSRRQPRAPKEKAQP K L D P R A 1 3 0 2 0 1 1 1 0 1 1 0 0 0 1 1 0 0 0 1 0 14 2 1610.8489 P46013;F5H4V4;P46013-2 P46013 2893 2906 MKI67 Antigen KI-67 no no 3 0.025397 52.495 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 27981000 2808700 0 7025100 0 6060800 12086000 4228 919;920 4276 18996;18997;18998;18999 12636 12636 1 LDAEPRPPPTQEAA VYDSPLCRLDAEPRPP PPPTQEAA________ R L D A A - 3 1 0 1 0 1 2 0 0 0 1 0 0 0 4 0 1 0 0 0 0 14 1 1490.7365 B4E363;Q9Y285 B4E363 464 477 FARSA Phenylalanine--tRNA ligase alpha subunit yes no 2 0.0047155 67.019 By matching By MS/MS By matching By matching By matching By matching 1 1 970010 0 615470 0 0 0 354540 4229 165 4277 19000;19001 12637 12637 1 LDAFIEALHQEK KVREIQEKLDAFIEAL IEALHQEK________ K L D E K - 2 0 0 1 0 1 2 0 1 1 2 1 0 1 0 0 0 0 0 0 0 12 0 1412.73 O60313;E5KLK1;E5KLJ6;E5KLJ9;O60313-2;E5KLJ5 O60313 949 960 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 2 1.8417E-193 176.99 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 14844000 8856000 0 0 5988300 0 0 4230 336 4278 19002;19003 12638;12639 12638 1 LDASILEDR GVGSARKKLDASILED DASILEDRDKPYACDI K L D D R D 1 1 0 2 0 0 1 0 0 1 2 0 0 0 0 1 0 0 0 0 0 9 0 1030.5295 Q92785 Q92785 197 205 DPF2 Zinc finger protein ubi-d4 yes yes 2 0.022182 68.626 By matching By matching By matching By matching By matching By MS/MS 1 1 1815400 0 369690 0 0 0 1445700 4231 1359 4279 19004;19005 12640 12640 1 LDDANDAGGRNSTECTLILTEGDSAK NRIKGIPKLDDANDAG LTEGDSAKTLAVSGLG K L D A K T 3 1 2 4 1 0 2 3 0 1 3 1 0 0 0 2 3 0 0 0 0 26 1 2722.2352 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5 P11388 441 466 TOP2A DNA topoisomerase 2-alpha yes no 3 4.7285E-117 130.16 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 123580000 0 11150000 75812000 5057200 5439600 26123000 4232 655 4280 19006;19007;19008;19009;19010 12641;12642;12643;12644;12645 12643 5 LDDIEEFENIRK KPTRLELKLDDIEEFE EEFENIRKDLETRKKQ K L D R K D 0 1 1 2 0 0 3 0 0 2 1 1 0 1 0 0 0 0 0 0 0 12 1 1519.7518 Q8NHZ8 Q8NHZ8 13 24 CDC26 Anaphase-promoting complex subunit CDC26 yes yes 3 1.0238E-50 134.13 By MS/MS By matching By matching By matching By matching By matching 1 5596800 5596800 0 0 0 0 0 4233 1329 4281 19011 12646 12646 1 LDDSSKLPGQAPEGLKVK AKSVIIPKLDDSSKLP APEGLKVKLSDASHLS K L D V K L 1 0 0 2 0 1 1 2 0 0 3 3 0 0 2 2 0 0 0 1 0 18 2 1881.0207 O15014 O15014 1083 1100 ZNF609 Zinc finger protein 609 yes yes 3 0.004461 66.977 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 6054900 0 0 715050 1123100 1341000 2875800 4234 701 4282 19012;19013;19014;19015 12647;12648 12647 2 LDDTPSGAGKFPAGHSVIQLAR GEYLKGRKLDDTPSGA HSVIQLARRQDSDLVQ K L D A R R 3 1 0 2 0 1 0 3 1 1 2 1 0 1 2 2 1 0 0 1 0 22 1 2236.16 Q9HC52;C9J6K3 Q9HC52 231 252 CBX8 Chromobox protein homolog 8 yes no 4 0.011973 38.991 By matching By matching By matching By matching By matching By MS/MS 1 18793000 0 0 0 0 0 18793000 4235 1519 4283 19016 12649 12649 1 LDEEFEK DCLLGSAKLDEEFEKK KLDEEFEKKFNSLPQY K L D E K K 0 0 0 1 0 0 3 0 0 0 1 1 0 1 0 0 0 0 0 0 0 7 0 908.41273 C9JA69;Q8WY36-2;Q8WY36 C9JA69 689 695 BBX HMG box transcription factor BBX yes no 2 2.7948E-31 130.04 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 25460000 2570500 3553000 7299400 2155500 4234600 5646400 4236 238 4284 19017;19018;19019;19020;19021;19022 12650;12651;12652;12653 12651 4 LDEFTNDFAK EEEKKKSKLDEFTNDF EFTNDFAKELMEYKKI K L D A K E 1 0 1 2 0 0 1 0 0 0 1 1 0 2 0 0 1 0 0 0 0 10 0 1198.5506 Q7Z6E9;H3BSK8 Q7Z6E9 658 667 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 2 0.03377 55.806 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4726900 0 1732300 0 1181600 0 1813000 4237 1255 4285 19023;19024;19025 12654 12654 1 LDEKNNAFPCQVNIKQK RKEDVTSKLDEKNNAF CQVNIKQKMQELNNEI K L D Q K M 1 0 3 1 1 2 1 0 0 1 1 3 0 1 1 0 0 0 0 1 0 17 2 2045.0364 Q9NQW6;Q9NQW6-2;H7C1K5 Q9NQW6 703 719 ANLN Actin-binding protein anillin yes no 4 0.0030031 66.568 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 1 9351600 0 3609600 2438500 0 1121200 2182400 4238 1533 4286 19026;19027;19028;19029;19030 12655;12656;12657 12657 3 LDEYIAIAK YHSIPDAKLDEYIAIA DEYIAIAKEKHGYNVE K L D A K E 2 0 0 1 0 0 1 0 0 2 1 1 0 0 0 0 0 0 1 0 0 9 0 1034.5648 E9PR63;E9PQE5;B4DV59;Q9P2K3-2;Q9P2K3-4;Q9UKL0;Q9P2K3;Q9P2K3-3 E9PR63 43 51 RCOR3;RCOR1 REST corepressor 3;REST corepressor 1 yes no 2 4.005E-07 117.89 By matching By matching By matching By matching By matching By MS/MS 1 1 2873000 0 1006400 0 0 0 1866600 4239 132 4287 19031;19032 12658 12658 1 LDFHEAQQK DPRLTKEKLDFHEAQQ DFHEAQQKKGKPHGSR K L D Q K K 1 0 0 1 0 2 1 0 1 0 1 1 0 1 0 0 0 0 0 0 0 9 0 1114.5407 Q14966-3;Q14966;Q14966-4;Q14966-2;C9JBI6;F5H330;C9JWN0 Q14966-3 87 95 ZNF638 Zinc finger protein 638 yes no 2 3.0893E-69 150.35 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 8605100 1287800 0 1820000 1030000 2087700 2379600 4240 1118 4288 19033;19034;19035;19036;19037 12659;12660 12659 2 LDFNTDEEK AYALQMTKLDFNTDEE DFNTDEEKKMVEEVFS K L D E K K 0 0 1 2 0 0 2 0 0 0 1 1 0 1 0 0 1 0 0 0 0 9 0 1109.4877 F5H7E2;P42285 F5H7E2 308 316 SKIV2L2 Superkiller viralicidic activity 2-like 2 yes no 2 0.016022 74.376 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2705100 0 0 390860 0 565450 1748700 4241 527 4289 19038;19039;19040 12661 12661 1 LDHVQFAEFK DGKNVKAKLDHVQFAE HVQFAEFKIDMDSKFE K L D F K I 1 0 0 1 0 1 1 0 1 0 1 1 0 2 0 0 0 0 0 1 0 10 0 1232.619 Q6PCB5-2;Q6PCB5 Q6PCB5-2 520 529 RSBN1L Round spermatid basic protein 1-like protein yes no 3 0.016665 63.624 By matching By MS/MS By matching By matching By matching By matching 1 1 2369000 0 1576900 0 792170 0 0 4242 1228 4290 19041;19042 12662 12662 1 LDHVVTIIKGK VKIVKANKLDHVVTII VVTIIKGKVEEVELPV K L D G K V 0 0 0 1 0 0 0 1 1 2 1 2 0 0 0 0 1 0 0 2 0 11 1 1221.7445 E9PKG1;Q99873-3;Q99873-2;G5E9B6;Q99873;H7C2I1;E9PNR9;E9PQ98;E9PIX6;H0YDE4;B4DJ87 E9PKG1 89 99 PRMT1 Protein arginine N-methyltransferase 1 yes no 3 5.6471E-55 138.25 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 14487000 0 1472900 2493900 1002800 3765200 5752400 4243 454 4291 19043;19044;19045;19046;19047 12663;12664;12665;12666 12663 4 LDIAFGTHHTK NISLCQAKLDIAFGTH AFGTHHTKMMLLLYEE K L D T K M 1 0 0 1 0 0 0 1 2 1 1 1 0 1 0 0 2 0 0 0 0 11 0 1238.6408 G3V2F4;E7EPD8;Q9NUW8;G3V2J6;G3V2U6;Q9BRS7;H0YJL7 G3V2F4 255 265 TDP1 Tyrosyl-DNA phosphodiesterase 1 yes no 3 3.6319E-09 112.83 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 17962000 0 2020200 3510800 2704100 3532500 6194400 4244 357 4292 19048;19049;19050;19051;19052 12667;12668;12669;12670;12671 12670 5 LDIEQYR YLQKAIMKLDIEQYRM KLDIEQYRMVKEALHE K L D Y R M 0 1 0 1 0 1 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 7 0 935.47125 P43304;F5GYK7;P43304-2 P43304 129 135 GPD2 Glycerol-3-phosphate dehydrogenase, mitochondrial yes no 2 0.040637 79.116 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3833100 0 535800 0 0 895180 2402100 4245 918 4293 19053;19054;19055 12672 12672 1 LDILGAAETGSGK LAPAIRDKLDILGAAE AAETGSGKTLAFAIPM K L D G K T 2 0 0 1 0 0 1 3 0 1 2 1 0 0 0 1 1 0 0 0 0 13 0 1230.6456 G3V529;Q9GZR7;F5H4J5;Q4V9L5 G3V529 188 200 DDX24 ATP-dependent RNA helicase DDX24 yes no 2 0.014755 51.771 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 18169000 0 9471700 0 0 0 8697700 4246 588 4294 19056;19057 12673;12674 12674 2 LDIQEALK DQTIMRKRLDIQEALK LDIQEALKRPIKQKRK R L D L K R 1 0 0 1 0 1 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 8 0 928.52295 Q96GM5-2;Q96GM5;F8VW95;F8VZ70;F8VUB0 Q96GM5-2 166 173 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes no 2 0.034536 69.825 By matching By MS/MS By matching By matching By matching By matching 1 1 2894600 688630 2206000 0 0 0 0 4247 1388 4295 19058;19059 12675 12675 1 LDKLENSAAPKK EKEKEPEKLDKLENSA ENSAAPKKKGFEEEHK K L D K K K 2 0 1 1 0 0 1 0 0 0 2 3 0 0 1 1 0 0 0 0 0 12 2 1312.7351 Q13435;E9PPJ0 Q13435 410 421 SF3B2 Splicing factor 3B subunit 2 yes no 3 0.038301 61.48 By MS/MS By matching By matching By matching By matching By matching 1 1 1351500 228150 0 1123300 0 0 0 4248 1083 4296 19060;19061 12676 12676 0 LDKSQIHDIVLVGGSTR EKALRDAKLDKSQIHD VLVGGSTRIPKIQKLL K L D T R I 0 1 0 2 0 1 0 2 1 2 2 1 0 0 0 2 1 0 0 2 0 17 1 1837.0058 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;A8K7Q2 P11142 326 342 HSPA8 Heat shock cognate 71 kDa protein yes no 3 0.0054689 46.925 By matching By MS/MS By matching By matching By matching By matching 1 1316500 0 1316500 0 0 0 0 4249 824 4297 19062 12677 12677 1 LDKSQIHDIVLVGGSTRIPK EKALRDAKLDKSQIHD GGSTRIPKIQKLLQDF K L D P K I 0 1 0 2 0 1 0 2 1 3 2 2 0 0 1 2 1 0 0 2 0 20 2 2175.2376 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;A8K7Q2 P11142 326 345 HSPA8 Heat shock cognate 71 kDa protein yes no 4 8.0826E-27 102.79 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 28308000 14748000 0 0 13559000 0 0 4250 824 4298 19063;19064 12678;12679 12678 2 LDLAGTLPGSK FMGTPVQKLDLAGTLP AGTLPGSKRQLQTPKE K L D S K R 1 0 0 1 0 0 0 2 0 0 3 1 0 0 1 1 1 0 0 0 0 11 0 1070.5972 P46013;F5H4V4;P46013-2 P46013 1198 1208 MKI67 Antigen KI-67 no no 2 2.2832E-128 166.29 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 819490000 184130000 234420000 146980000 32277000 24682000 196990000 4251 919;920 4299 19065;19066;19067;19068;19069;19070;19071 12680;12681;12682;12683;12684;12685;12686 12686 7 LDLCIGHRLGKDFSANFEEK L D E K 1 1 1 2 1 0 2 2 1 1 3 2 0 2 0 1 0 0 0 0 0 20 2 2348.1583 REV__O60290 yes yes 4 0.0050187 44.998 By matching By MS/MS By matching By matching By matching By matching 2 1 5051700000 0 3974000000 0 1077700000 0 0 + 4252 1674 4300 19072;19073;19074 12687 12687 1 LDLGAQGKGQGHQYELNSK SSTDNRAKLDLGAQGK HQYELNSKKHHQYQPH K L D S K K 1 0 1 1 0 3 1 4 1 0 3 2 0 0 0 1 0 0 1 0 0 19 1 2042.0181 O00257;O00257-3 O00257 107 125 CBX4 E3 SUMO-protein ligase CBX4 yes no 3;4 1.1062E-38 112.44 By MS/MS By matching By matching By MS/MS By matching By MS/MS 2 1 1 2 1 1 44307000 14188000 3548600 2986300 15014000 4206900 4362500 4253 687 4301 19075;19076;19077;19078;19079;19080;19081;19082 12688;12689;12690;12691;12692 12691 5 LDLLMQK KKMDKTAKLDLLMQKI KLDLLMQKIGMRGKPK K L D Q K I 0 0 0 1 0 1 0 0 0 0 3 1 1 0 0 0 0 0 0 0 0 7 0 859.48372 G3V529;Q9GZR7;F5H4J5;Q4V9L5;F5GYL3;F5H4V3 G3V529 492 498 DDX24 ATP-dependent RNA helicase DDX24 yes no 2 1.8321E-31 139.92 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 71787000 29521000 4034000 15654000 5637100 8553900 8386700 4254 588 4302 19083;19084;19085;19086;19087;19088 12693;12694;12695;12696;12697 12697 5 LDLPGNLPGSK FMGTPVQKLDLPGNLP PGNLPGSKRWPQTPKE K L D S K R 0 0 1 1 0 0 0 2 0 0 3 1 0 0 2 1 0 0 0 0 0 11 0 1109.6081 P46013;F5H4V4;P46013-2 P46013 2290 2300 MKI67 Antigen KI-67 no no 2 1.7516E-86 151.13 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2 1 821440000 148740000 149600000 168330000 55556000 101710000 197500000 4255 919;920 4303 19089;19090;19091;19092;19093;19094;19095;19096 12698;12699;12700;12701;12702;12703;12704 12701 7 LDLTENLTGSK FVGTPVQKLDLTENLT TENLTGSKRRPQTPKE K L D S K R 0 0 1 1 0 0 1 1 0 0 3 1 0 0 0 1 2 0 0 0 0 11 0 1189.619 P46013;F5H4V4;P46013-2 P46013 1320 1330 MKI67 Antigen KI-67 no no 2 4.8124E-208 184.44 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 3 2 3 846090000 290100000 112400000 192680000 39843000 31347000 179720000 4256 919;920 4304 19097;19098;19099;19100;19101;19102;19103;19104;19105;19106;19107;19108 12705;12706;12707;12708;12709;12710;12711;12712;12713;12714 12707 10 LDLTENLTGSKRR FVGTPVQKLDLTENLT NLTGSKRRPQTPKEEA K L D R R P 0 2 1 1 0 0 1 1 0 0 3 1 0 0 0 1 2 0 0 0 0 13 2 1501.8213 P46013;F5H4V4;P46013-2 P46013 1320 1332 MKI67 Antigen KI-67 no no 3 0.0271 56.936 By MS/MS By matching By matching By matching By matching By matching 1 1 1 4124500 1243300 1107500 1773700 0 0 0 4257 919;920 4305 19109;19110;19111 12715 12715 1 LDNARQSAERNSNLVGAAHEELQQSR LEKTYSAKLDNARQSA HEELQQSRIRIDSLSA K L D S R I 4 3 3 1 0 3 3 1 1 0 3 0 0 0 0 3 0 0 0 1 0 26 2 2892.4187 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCJ4;Q5TCI8 P02545 271 296 LMNA Prelamin-A/C;Lamin-A/C yes no 4 0.020816 31.38 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 20684000 2434800 3120600 5525000 2152700 1829400 5621300 4258 783 4306 19112;19113;19114;19115;19116;19117 12716 12716 1 LDNEIKALDSRK HNLSKIMKLDNEIKAL IKALDSRKKQMEKDNS K L D R K K 1 1 1 2 0 0 1 0 0 1 2 2 0 0 0 1 0 0 0 0 0 12 2 1400.7623 Q92878-2;Q92878;Q92878-3;E7EN38;E7ESD9 Q92878-2 274 285 RAD50 DNA repair protein RAD50 yes no 3 0.019084 63.181 By matching By matching By MS/MS By matching By matching By matching 1 1 1 6097500 1520100 0 2277400 2300000 0 0 4259 1362 4307 19118;19119;19120 12717 12717 1 LDNGGYYITTR VKHYKIRKLDNGGYYI GGYYITTRAQFDTLQK K L D T R A 0 1 1 1 0 0 0 2 0 1 1 0 0 0 0 0 2 0 2 0 0 11 0 1271.6146 P07947;E5RFS5;P06241-3;Q5R3A8;B3KPS6;P06241-2;P06241 P07947 217 227 YES1;FYN Tyrosine-protein kinase Yes;Tyrosine-protein kinase Fyn yes no 2 1.5479E-05 105.03 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 10192000 0 1822100 1980900 937230 1622500 3829000 4260 803 4308 19121;19122;19123;19124;19125 12718;12719;12720;12721;12722 12719 5 LDPAASVTGSK FRETAKQKLDPAASVT AASVTGSKRHPKTKEK K L D S K R 2 0 0 1 0 0 0 1 0 0 1 1 0 0 1 2 1 0 0 1 0 11 0 1044.5451 P46013;F5H4V4;P46013-2 P46013 1442 1452 MKI67 Antigen KI-67 no no 2 0.0037335 80.871 By MS/MS By MS/MS By matching By matching By matching By MS/MS 2 1 1 1 2 1 562700000 103250000 87768000 91894000 41738000 60235000 177820000 4261 919;920 4309 19126;19127;19128;19129;19130;19131;19132;19133 12723;12724;12725;12726 12725 4 LDPEIVPEEK DTPSKKRKLDPEIVPE PEIVPEEKDCGDAEGN K L D E K D 0 0 0 1 0 0 3 0 0 1 1 1 0 0 2 0 0 0 0 1 0 10 0 1167.6023 O43148;O43148-2 O43148 84 93 RNMT mRNA cap guanine-N7 methyltransferase yes no 2 2.3531E-06 112.85 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 28665000 3714000 6120600 3783200 2929600 3061200 9056700 4262 709 4310 19134;19135;19136;19137;19138;19139 12727;12728;12729;12730 12729 4 LDPEIVPEEKDCGDAEGNSK DTPSKKRKLDPEIVPE GDAEGNSKKRKRETED K L D S K K 1 0 1 3 1 0 4 2 0 1 1 2 0 0 2 1 0 0 0 1 0 20 1 2200.9794 O43148;O43148-2 O43148 84 103 RNMT mRNA cap guanine-N7 methyltransferase yes no 3 0.00011418 72.21 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 17353000 2989200 0 5087900 3085500 2747300 3443000 4263 709 4311 19140;19141;19142;19143;19144 12731;12732;12733 12733 3 LDQDLNEVKAR KNLEQYNKLDQDLNEV DLNEVKARVEELDRKY K L D A R V 1 1 1 2 0 1 1 0 0 0 2 1 0 0 0 0 0 0 0 1 0 11 1 1299.6783 Q9UQE7 Q9UQE7 437 447 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 9.5337E-13 115 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 3110600 0 850080 0 0 0 2260500 4264 1625 4312 19145;19146 12734;12735;12736 12734 3 LDQEMEQLNHHTTTR DLDRTLRKLDQEMEQL LNHHTTTRTQMEMLTK K L D T R T 0 1 1 1 0 2 2 0 2 0 2 0 1 0 0 0 3 0 0 0 0 15 0 1851.8534 Q92878-2;Q92878;Q92878-3;E7ESD9;H7C0P8 Q92878-2 527 541 RAD50 DNA repair protein RAD50 yes no 3 0.0020693 60.657 By matching By matching By matching By matching By matching By MS/MS 1 1 1353400 354070 0 0 0 0 999330 4265 1362 4313 19147;19148 12737 12737 1 LDQGNLHTSVSSAQGQDAAQSEEK SRETVILRLDQGNLHT DAAQSEEKRGITAREL R L D E K R 3 0 1 2 0 4 2 2 1 0 2 1 0 0 0 4 1 0 0 1 0 24 0 2499.1474 Q9UBG3 Q9UBG3 455 478 CRNN Cornulin yes yes 3 0.018068 33.594 By matching By matching By matching By matching By MS/MS By matching 1 2154100 0 0 0 0 2154100 0 4266 1582 4314 19149 12738 12738 1 LDQPGNLPGSNR FLGTPVQKLDQPGNLP GNLPGSNRRLQTRKEK K L D N R R 0 1 2 1 0 1 0 2 0 0 2 0 0 0 2 1 0 0 0 0 0 12 0 1266.6317 P46013;F5H4V4;P46013-2 P46013 1806 1817 MKI67 Antigen KI-67 no no 2 4.11E-07 101.53 By MS/MS By matching By MS/MS By matching By matching By MS/MS 2 1 1 1 14467000 2790100 0 2935700 2373000 0 6368300 4267 919;920 4315 19150;19151;19152;19153;19154 12739;12740;12741;12742 12742 4 LDQPGNLPGSNRR FLGTPVQKLDQPGNLP NLPGSNRRLQTRKEKA K L D R R L 0 2 2 1 0 1 0 2 0 0 2 0 0 0 2 1 0 0 0 0 0 13 1 1422.7328 P46013;F5H4V4;P46013-2 P46013 1806 1818 MKI67 Antigen KI-67 no no 3 0.00071833 75.788 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 307820000 47314000 47382000 44989000 20493000 55303000 92337000 4268 919;920 4316 19155;19156;19157;19158;19159;19160;19161 12743;12744;12745;12746;12747;12748;12749 12749 7 LDQTHLETVIPAPGK IDSGDKLKLDQTHLET TVIPAPGKRILVLNGG K L D G K R 1 0 0 1 0 1 1 1 1 1 2 1 0 0 2 0 2 0 0 1 0 15 0 1617.8726 B4DX32;O60870;F5GXB3 B4DX32 327 341 KIN DNA/RNA-binding protein KIN17 yes no 3 4.5104E-43 123.76 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 35742000 5358100 9754600 0 4031400 0 16598000 4269 136 4317 19162;19163;19164;19165 12750;12751;12752;12753 12751 4 LDQWLCEK HKALCSEKLDQWLCEK LDQWLCEKL_______ K L D E K L 0 0 0 1 1 1 1 0 0 0 2 1 0 0 0 0 0 1 0 0 0 8 0 1090.5117 CON__P00711 CON__P00711 115 122 yes yes 2 0.0066147 106.6 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 8143000 973010 1714400 0 858840 1971300 2625500 + 4270 283 4318 19166;19167;19168;19169;19170 12754;12755;12756 12756 3 LDRLAYIAHPK IPKGVSRKLDRLAYIA LAYIAHPKLGKRARAR K L D P K L 2 1 0 1 0 0 0 0 1 1 2 1 0 0 1 0 0 0 1 0 0 11 1 1295.735 P47914 P47914 93 103 RPL29 60S ribosomal protein L29 yes yes 3 0.0039173 80.245 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 24118000 0 3148200 3036700 4188700 7518600 6225700 4271 930 4319 19171;19172;19173;19174;19175 12757;12758;12759;12760 12759 4 LDRLNTVASPK KRESKKIKLDRLNTVA LNTVASPKDCQELASI K L D P K D 1 1 1 1 0 0 0 0 0 0 2 1 0 0 1 1 1 0 0 1 0 11 1 1212.6826 Q96T58 Q96T58 1054 1064 SPEN Msx2-interacting protein yes yes 3 0.0048795 75.229 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3144900 0 0 581660 484090 932070 1147100 4272 1422 4320 19176;19177;19178;19179 12761 12761 1 LDRTVAEKAVK VRTVPIAKLDRTVAEK TVAEKAVKKYVEDEMA K L D V K K 2 1 0 1 0 0 1 0 0 0 1 2 0 0 0 0 1 0 0 2 0 11 2 1228.7139 A6NHR9;A6NHR9-2 A6NHR9 669 679 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes no 3 0.020655 69.815 By matching By matching By matching By MS/MS By matching By matching 1 1 1 3548000 0 1687300 0 764930 0 1095700 4273 23 4321 19180;19181;19182 12762 12762 1 LDSPAGTALSPSGHTK KTILDKVKLDSPAGTA LSPSGHTKLLPRSLAP K L D T K L 2 0 0 1 0 0 0 2 1 0 2 1 0 0 2 3 2 0 0 0 0 16 0 1537.7736 P32322;B4DMU0 P32322 292 307 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial;Pyrroline-5-carboxylate reductase yes no 3 0.004874 48.391 By matching By matching By matching By matching By matching By MS/MS 1 1 2438700 0 0 0 0 1022500 1416300 4274 890 4322 19183;19184 12763;12764 12763 2 LDSSPSVSSTLAAK QASKATPKLDSSPSVS VSSTLAAKDDPDGKQE K L D A K D 2 0 0 1 0 0 0 0 0 0 2 1 0 0 1 5 1 0 0 1 0 14 0 1361.7038 Q13428-7;E7ETY2;Q13428-6;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 1226 1239 TCOF1 Treacle protein no no 2 1.2552E-84 136.33 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 2 1 155970000 24262000 17088000 9061100 14186000 69117000 22255000 4275 1082;383 4323 19185;19186;19187;19188;19189;19190;19191;19192 12765;12766;12767;12768 12767 3 LDTVQTLKTAK ALEDRKNKLDTVQTLK VQTLKTAKTKQKCAAQ K L D A K T 1 0 0 1 0 1 0 0 0 0 2 2 0 0 0 0 3 0 0 1 0 11 1 1216.7027 Q8N5C6 Q8N5C6 105 115 SRBD1 S1 RNA-binding domain-containing protein 1 yes yes 2;3 1.2302E-07 110.64 By MS/MS By matching By matching By MS/MS By matching By MS/MS 3 2 2 2 2 2 43970000 10614000 6181100 4035400 5578600 8346900 9214400 4276 1302 4324 19193;19194;19195;19196;19197;19198;19199;19200;19201;19202;19203;19204;19205 12769;12770;12771;12772 12771 4 LDVEEPDSANSSFYSTR INITMTKKLDVEEPDS NSSFYSTRSAPASQAS K L D T R S 1 1 1 2 0 0 2 0 0 0 1 0 0 1 1 4 1 0 1 1 0 17 0 1915.8436 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9 Q14980-2 1809 1825 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 1.9784E-181 156.29 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 36861000 13703000 0 6833700 0 1807400 14516000 4277 1121 4325 19206;19207;19208;19209 12773;12774;12775 12775 3 LDVGEAMAPPSHRK PSAPKKLKLDVGEAMA MAPPSHRKGDSNANSD K L D R K G 2 1 0 1 0 0 1 1 1 0 1 1 1 0 2 1 0 0 0 1 0 14 1 1506.7613 E7EV54;Q8IZL8;I3L3A8;C9JFV4;Q8IZL8-2 E7EV54 352 365 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 yes no 3 0.00094143 67.019 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 10712000 407370 1039500 0 487370 3907700 4870400 4278 242 4326 19210;19211;19212;19213;19214 12776;12777 12776 2 LEAAGPGEPGTKAK LELQLRGKLEAAGPGE GEPGTKAKKGRRSRTV K L E A K K 3 0 0 0 0 0 2 3 0 0 1 2 0 0 2 0 1 0 0 0 0 14 1 1324.6987 Q9HBU1 Q9HBU1 127 140 BARX1 Homeobox protein BarH-like 1 yes yes 3 0.0011291 71.558 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 2718200 291670 449650 583830 298850 419160 675050 4279 1518 4327 19215;19216;19217;19218;19219;19220 12778;12779 12778 2 LEAAHFDEK VRRECEIKLEAAHFDE EAAHFDEKKEINKRKQ K L E E K K 2 0 0 1 0 0 2 0 1 0 1 1 0 1 0 0 0 0 0 0 0 9 0 1058.5033 Q9Y6V7 Q9Y6V7 399 407 DDX49 Probable ATP-dependent RNA helicase DDX49 yes yes 2 1.1158E-29 135.43 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 2 1 12738000 1506800 1302100 3505000 1083000 2853100 2487700 4280 1662 4328 19221;19222;19223;19224;19225;19226;19227 12780;12781;12782;12783 12783 4 LEAALGEAK DLRGQVAKLEAALGEA EAALGEAKKQLQDEML K L E A K K 3 0 0 0 0 0 2 1 0 0 2 1 0 0 0 0 0 0 0 0 0 9 0 900.49165 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCJ4;Q5TCI8;H0YAB0 P02545 172 180 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.0087494 86.882 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 4761000 0 0 0 1053300 1329000 2378700 4281 783 4329 19228;19229;19230 12784;12785 12784 2 LEAAQNVLLCK GSPHWQTKLEAAQNVL AQNVLLCKEIFAQLSR K L E C K E 2 0 1 0 1 1 1 0 0 0 3 1 0 0 0 0 0 0 0 1 0 11 0 1257.6751 E7ET21;Q9NVC6 E7ET21 265 275 MED17 Mediator of RNA polymerase II transcription subunit 17 yes no 2 0.0043556 77.288 By MS/MS By matching By matching By matching By matching By MS/MS 2 1 6134700 5340800 0 0 0 0 793880 4282 379 4330 19231;19232;19233 12786;12787 12786 2 LEAASSALGGPTLTHAVTR FIADCYTRLEAASSAL TLTHAVTRATKMLTAT R L E T R A 4 1 0 0 0 0 1 2 1 0 3 0 0 0 1 2 3 0 0 1 0 19 0 1850.985 B7WPF4;Q9UPU5 B7WPF4 717 735 USP24 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 24 yes no 3 0.00022412 70.944 By matching By matching By matching By matching By matching By MS/MS 1 2301900 0 0 0 0 0 2301900 4283 180 4331 19234 12788 12788 1 LEAAVAQSEQQGEAALSDARCK NAKCQNSKLEAAVAQS ALSDARCKLAELEGAL K L E C K L 6 1 0 1 1 3 3 1 0 0 2 1 0 0 0 2 0 0 0 1 0 22 1 2331.1125 O43790;CON__O43790;F8W6V8;A6NCN2;P78385;CON__Q6NT21;CON__P78385;Q14533;CON__Q14533 O43790 346 367 KRT86;KRT121P;KRT83;KRT81 Keratin, type II cuticular Hb6;Keratin-81-like protein KRT121P;Keratin, type II cuticular Hb3;Keratin, type II cuticular Hb1 yes no 3 0.0073752 41.689 By matching By matching By matching By MS/MS By matching By matching 1 455710 0 0 0 455710 0 0 + 4284 282 4332 19235 12789 12789 1 LEAELLQIEERHQEK SLMVHQRKLEAELLQI IEERHQEKKRKFLEST K L E E K K 1 1 0 0 0 2 5 0 1 1 3 1 0 0 0 0 0 0 0 0 0 15 1 1863.969 C0IMW5;B4DFR4;Q969G3-2;B4DGM3;Q969G3;H7C048;H7BXG8;H7C3F6 C0IMW5 206 220 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes no 3 2.9627E-08 95.428 By MS/MS By matching By matching By matching By matching By matching 1 4926300 4926300 0 0 0 0 0 4285 85 4333 19236 12790 12790 1 LEAIVQK PRKGRGLKLEAIVQKI KLEAIVQKITSPSLKK K L E Q K I 1 0 0 0 0 1 1 0 0 1 1 1 0 0 0 0 0 0 0 1 0 7 0 799.48035 Q9UGU0-2;Q9UGU0;Q7Z5J4-3;E7EVZ3;Q7Z5J4;A8MTC3;Q7Z5J4-2;C9JWB0 Q7Z5J4-3 1329 1335 TCF20;RAI1 Transcription factor 20;Retinoic acid-induced protein 1 no no 2 0.0078714 97.473 By matching By matching By MS/MS By matching By matching By matching 1 1 1706100 0 588140 1117900 0 0 0 4286 39;1591 4334 19237;19238 12791 12791 1 LEALRAEVSK RTEPTGPKLEALRAEV ALRAEVSKLEQQCQKQ K L E S K L 2 1 0 0 0 0 2 0 0 0 2 1 0 0 0 1 0 0 0 1 0 10 1 1114.6346 Q14980-2;Q14980;F5H2L0 Q14980-2 1122 1131 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 3.1638E-138 166.86 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 24698000 4172600 3729200 3980500 1681900 5025000 6109200 4287 1121 4335 19239;19240;19241;19242;19243;19244;19245 12792;12793;12794;12795;12796;12797;12798 12796 7 LEALSVKEETK HAEKVAEKLEALSVKE LSVKEETKEDAEEKQ_ K L E T K E 1 0 0 0 0 0 3 0 0 0 2 2 0 0 0 1 1 0 0 1 0 11 1 1245.6816 H7C137;C9JXG8;P43487 H7C137 111 121 RANBP1 Ran-specific GTPase-activating protein yes no 2;3 2.4308E-05 103.91 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 2 2 14597000 1344200 1004200 2864700 2423500 2507300 4452700 4288 272 4336 19246;19247;19248;19249;19250;19251;19252;19253;19254;19255 12799;12800;12801;12802;12803;12804;12805;12806;12807;12808;12809 12805 10 LEAQEQAFLAR TMKAKLARLEAQEQAF QEQAFLARLKGQDPGA R L E A R L 3 1 0 0 0 2 2 0 0 0 2 0 0 1 0 0 0 0 0 0 0 11 0 1274.6619 Q5T3I0;Q5T3I0-3;E9PAV9;F8W895 Q5T3I0 174 184 GPATCH4 G patch domain-containing protein 4 yes no 2 0.0030558 84.507 By matching By MS/MS By matching By matching By matching By matching 1 1 1 4753800 2592100 1194500 0 967100 0 0 4289 1191 4337 19256;19257;19258 12810;12811 12811 2 LEAQETLNEEDKAK TDNRPLKKLEAQETLN LNEEDKAKIAKSKKKM K L E A K I 2 0 1 1 0 1 4 0 0 0 2 2 0 0 0 0 1 0 0 0 0 14 1 1616.7893 H0YII3;Q9UIF9-2;Q9UIF9-3;F8VU39;Q9UIF9 H0YII3 122 135 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 3 0.0011274 76.326 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 6638800 0 1496200 875390 1014900 2167800 1084500 4290 540 4338 19259;19260;19261;19262;19263 12812;12813 12812 2 LEATAASSVK MRRGLNSRLEATAASS ATAASSVKTRMQKLAE R L E V K T 3 0 0 0 0 0 1 0 0 0 1 1 0 0 0 2 1 0 0 1 0 10 0 975.52368 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 134 143 ANLN Actin-binding protein anillin yes no 2 0.0086058 81.017 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 3573000 0 1149700 1225600 0 436660 761060 4291 1533 4339 19264;19265;19266;19267 12814;12815 12815 2 LEATAASSVKTR MRRGLNSRLEATAASS AASSVKTRMQKLAEQR R L E T R M 3 1 0 0 0 0 1 0 0 0 1 1 0 0 0 2 2 0 0 1 0 12 1 1232.6725 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 134 145 ANLN Actin-binding protein anillin yes no 2;3 0.0019061 86.772 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 28504000 3163700 7476300 4028400 1565400 5946000 6324100 4292 1533 4340 19268;19269;19270;19271;19272;19273;19274;19275;19276;19277;19278;19279;19280 12816;12817;12818;12819;12820;12821;12822;12823;12824 12820 9 LEAVQYK KTNETYGKLEAVQYKT KLEAVQYKTQVVAGTN K L E Y K T 1 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 1 1 0 7 0 849.45962 P01040;C9J0E4 P01040 38 44 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes no 2 0.040161 83.377 By matching By matching By MS/MS By matching By matching By matching 1 3118200 0 0 3118200 0 0 0 4293 781 4341 19281 12825 12825 1 LECDEECSALER KKEVHQARLECDEECS EECSALERKKRLAEAF R L E E R K 1 1 0 1 2 0 4 0 0 0 2 0 0 0 0 1 0 0 0 0 0 12 0 1509.6076 Q12986;Q12986-2;E9PG33 Q12986 945 956 NFX1 Transcriptional repressor NF-X1 yes no 2 0.0019013 85.672 By matching By matching By matching By matching By matching By MS/MS 1 796190 0 0 0 0 0 796190 4294 1066 4342 19282 12826;12827 12827 2 LECDLQQR EACEGQHKLECDLQQR LECDLQQREEEIAELQ K L E Q R E 0 1 0 1 1 2 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 8 0 1060.4971 F5H0W5;Q9BR77-2;Q9BR77 F5H0W5 61 68 CCDC77 Coiled-coil domain-containing protein 77 yes no 2 0.021668 78.516 By matching By matching By matching By matching By matching By MS/MS 1 422270 0 0 0 0 0 422270 4295 506 4343 19283 12828 12828 1 LECLLNECTSLCENRK AAQEKNSKLECLLNEC TSLCENRKNELEQLKE K L E R K N 0 1 2 0 3 0 3 0 0 0 4 1 0 0 0 1 1 0 0 0 0 16 1 2037.9282 P49454 P49454 1053 1068 CENPF Centromere protein F yes yes 3 0.00033333 72.898 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 5875100 0 1659300 0 362750 0 3853000 4296 936 4344 19284;19285;19286 12829;12830 12829 2 LECQDIINK KVNKSKQKLECQDIIN ECQDIINKHYMEVNSN K L E N K H 0 0 1 1 1 1 1 0 0 2 1 1 0 0 0 0 0 0 0 0 0 9 0 1131.5594 Q562F6-2;Q562F6 Q562F6-2 952 960 SGOL2 Shugoshin-like 2 yes no 2 0.00074828 109.66 By matching By MS/MS By matching By matching By matching By matching 1 1 1396600 477420 919130 0 0 0 0 4297 1175 4345 19287;19288 12831 12831 1 LECVKTKHPQLHIESK AGEEVAIKLECVKTKH PQLHIESKIYKMMQGG K L E S K I 0 0 0 0 1 1 2 0 2 1 2 3 0 0 1 1 1 0 0 1 0 16 2 1946.0408 P49674;B0QY35;B0QY34;B0QY36;B4DLF1;P48730-2;P48730 P48730-2 39 54 CSNK1E;CSNK1D Casein kinase I isoform epsilon;Casein kinase I isoform delta no no 4 0.0074618 46.324 By matching By matching By matching By matching By matching By MS/MS 1 1796000 0 0 0 0 0 1796000 4298 932;939 4346 19289 12832 12832 1 LEDGPKFLK IDRRSGKKLEDGPKFL EDGPKFLKSGDAAIVD K L E L K S 0 0 0 1 0 0 1 1 0 0 2 2 0 1 1 0 0 0 0 0 0 9 1 1045.5808 Q5VTE0;P68104;Q6IQ15;F8W6I0 Q5VTE0 387 395 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 2 0.03517 79.489 By MS/MS By matching By matching By matching By matching By matching 1 1566400 1566400 0 0 0 0 0 4299 1006 4347 19290 12833 12833 1 LEDLQQFQK SADNLCRKLEDLQQFQ EDLQQFQKREPENEEE K L E Q K R 0 0 0 1 0 3 1 0 0 0 2 1 0 1 0 0 0 0 0 0 0 9 0 1147.5873 Q9ULM3 Q9ULM3 1277 1285 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.0087494 86.882 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1703300 0 610950 294620 0 0 797690 4300 1609 4348 19291;19292;19293 12834 12834 1 LEDSTRETQSQLETER IEERCRRKLEDSTRET QSQLETERSRYQREID K L E E R S 0 2 0 1 0 2 4 0 0 0 2 0 0 0 0 2 3 0 0 0 0 16 1 1920.9025 P15924;P15924-2 P15924 1917 1932 DSP Desmoplakin yes no 3 0.0033905 53.491 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 5165800 0 610260 2273400 357160 569190 1355800 4301 840 4349 19294;19295;19296;19297;19298 12835;12836 12835 2 LEDTHFVQCPSVPSHK CCTLCHERLEDTHFVQ CPSVPSHKFCFPCSRQ R L E H K F 0 0 0 1 1 1 1 0 2 0 1 1 0 1 2 2 1 0 0 2 0 16 0 1879.8887 Q7Z5L9-2;Q7Z5L9;Q7Z5L9-3;Q9H1B7 Q7Z5L9-2 497 512 IRF2BP2;IRF2BPL Interferon regulatory factor 2-binding protein 2;Interferon regulatory factor 2-binding protein-like yes no 4 0.004983 47.548 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2409300 322170 434750 0 0 0 1652300 4302 1254 4350 19299;19300;19301 12837 12837 1 LEEANGNTQMVEK HIWITAAKLEEANGNT GNTQMVEKIIDRAITS K L E E K I 1 0 2 0 0 1 3 1 0 0 1 1 1 0 0 0 1 0 0 1 0 13 0 1461.677 O94906-2;O94906 O94906-2 473 485 PRPF6 Pre-mRNA-processing factor 6 yes no 2 0.0013462 76.01 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1489400 0 148960 0 0 361580 978830 4303 757 4351 19302;19303;19304 12838;12839 12839 2 LEEDINSSMTNSTAASRPPVTLR AFAMIIDKLEEDINSS SRPPVTLRLVVPATQC K L E L R L 2 2 2 1 0 0 2 0 0 1 2 0 1 0 2 4 3 0 0 1 0 23 1 2488.2228 Q15365 Q15365 79 101 PCBP1 Poly(rC)-binding protein 1 yes yes 3 1.0998E-08 66.536 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 65134000 0 37072000 0 0 0 28061000 4304 1135 4352 19305;19306 12840;12841 12841 2 LEEDISSSMTNSTAASRPPVTLR AFAMIIDKLEEDISSS SRPPVTLRLVVPASQC K L E L R L 2 2 1 1 0 0 2 0 0 1 2 0 1 0 2 5 3 0 0 1 0 23 1 2461.2119 F8VZX2;Q15366-4;Q15366-5;Q15366-3;Q15366;Q15366-2;H3BRU6;G3V0E8;B4DXP5;B4DRD7;F8W0G4;B4DLC0;F8VXH9;F8W1G6;H3BND9 F8VZX2 79 101 PCBP2 Poly(rC)-binding protein 2 yes no 3 1.9857E-10 81.157 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 21525000 0 10421000 0 0 0 11104000 4305 548 4353 19307;19308 12842;12843 12843 2 LEEEALHEYREDSNDK AEKSLLEKLEEEALHE YREDSNDKISEVSSDS K L E D K I 1 1 1 2 0 0 5 0 1 0 2 1 0 0 0 1 0 0 1 0 0 16 1 1975.8759 Q6UB99 Q6UB99 1284 1299 ANKRD11 Ankyrin repeat domain-containing protein 11 yes yes 3 0.019967 40.941 By matching By MS/MS By matching By matching By matching By matching 1 1 1378300 0 704950 673340 0 0 0 4306 1236 4354 19309;19310 12844 12844 1 LEEELKAR KLQKMLPKLEEELKAR LEEELKARIELWEQEH K L E A R I 1 1 0 0 0 0 3 0 0 0 2 1 0 0 0 0 0 0 0 0 0 8 1 986.53966 H9KV59;O43663;H0YL53;G3V3N7 H9KV59 402 409 PRC1 Protein regulator of cytokinesis 1 no no 2 0.020895 103.83 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 4433300 0 2159900 0 529300 0 1744100 4307 676 4355 19311;19312;19313 12845;12846 12846 2 LEEFVNGLDKQVK EFEEASSKLEEFVNGL NGLDKQVKNGPSLTEA K L E V K N 0 0 1 1 0 1 2 1 0 0 2 2 0 1 0 0 0 0 0 2 0 13 1 1517.809 Q5VT52-3;Q5VT52;B4E2Q6;Q5VT52-2 Q5VT52-3 224 236 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes no 3 0.033233 43.761 By matching By MS/MS By matching By matching By matching By matching 1 1 2320000 0 865910 0 0 0 1454100 4308 1202 4356 19314;19315 12847 12847 1 LEELGLAGR RILRIMCRLEELGLAG EELGLAGRCLTLTPRP R L E G R C 1 1 0 0 0 0 2 2 0 0 3 0 0 0 0 0 0 0 0 0 0 9 0 956.5291 E7ERH6;Q9UBN7 E7ERH6 514 522 HDAC6 Histone deacetylase 6 yes no 2 0.028575 65.157 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 8366800 1457300 1292300 720900 1028400 0 3868000 4309 370 4357 19316;19317;19318;19319;19320 12848 12848 1 LEELRQHAACK ANEKMNAKLEELRQHA LRQHAACKLDLQKLVE K L E C K L 2 1 0 0 1 1 2 0 1 0 2 1 0 0 0 0 0 0 0 0 0 11 1 1353.6823 O95239;O95239-2 O95239 434 444 KIF4A Chromosome-associated kinesin KIF4A yes no 3 0.011339 70.028 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 7555300 0 3937700 0 804820 0 2812800 4310 768 4358 19321;19322;19323 12849;12850 12850 2 LEELTMDGAK LNEDKLEKLEELTMDG ELTMDGAKAKAILDAS K L E A K A 1 0 0 1 0 0 2 1 0 0 2 1 1 0 0 0 1 0 0 0 0 10 0 1105.5325 O00567;H0YDU4;Q5JXT2 O00567 231 240 NOP56 Nucleolar protein 56 yes no 2 3.0441E-15 121.9 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2 1 32308000 4417600 2139100 1751100 4447600 12203000 7349400 4311 692 4359 19324;19325;19326;19327;19328;19329;19330;19331 12851;12852;12853;12854;12855;12856;12857;12858 12856 8 LEELTMDGAKAK LNEDKLEKLEELTMDG TMDGAKAKAILDASRS K L E A K A 2 0 0 1 0 0 2 1 0 0 2 2 1 0 0 0 1 0 0 0 0 12 1 1304.6646 O00567;H0YDU4;Q5JXT2 O00567 231 242 NOP56 Nucleolar protein 56 yes no 2;3 2.2939E-12 111.5 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 3 2 1 1 2 2 48202000 11605000 4346000 3423600 5262100 11893000 11673000 4312 692 4360 19332;19333;19334;19335;19336;19337;19338;19339;19340;19341;19342 12859;12860;12861;12862;12863;12864;12865 12865 7 LEENIDNIK QMKSEHQKLEENIDNI EENIDNIKRNHNLALG K L E I K R 0 0 2 1 0 0 2 0 0 2 1 1 0 0 0 0 0 0 0 0 0 9 0 1086.5557 Q92878-2;Q92878;Q92878-3 Q92878-2 1066 1074 RAD50 DNA repair protein RAD50 yes no 2 2.2966E-41 137.95 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 32557000 1620100 4744700 5196000 3991100 6522000 10483000 4313 1362 4361 19343;19344;19345;19346;19347;19348 12866;12867;12868;12869 12866 4 LEENIDNIKR QMKSEHQKLEENIDNI ENIDNIKRNHNLALGR K L E K R N 0 1 2 1 0 0 2 0 0 2 1 1 0 0 0 0 0 0 0 0 0 10 1 1242.6568 Q92878-2;Q92878;Q92878-3 Q92878-2 1066 1075 RAD50 DNA repair protein RAD50 yes no 3 0.0069909 69.275 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 1 1 4906800 1189000 1101700 762870 663240 0 1190000 4314 1362 4362 19349;19350;19351;19352;19353;19354 12870;12871;12872;12873 12872 4 LEERLRLLQAETASNSAR AESEKSQKLEERLRLL ETASNSARAAERSSAL K L E A R A 3 3 1 0 0 1 3 0 0 0 4 0 0 0 0 2 1 0 0 0 0 18 2 2056.1025 Q14980-2;Q14980;F5H2L0;H0YFY6 Q14980-2 1265 1282 NUMA1 Nuclear mitotic apparatus protein 1 yes no 4 0.0020525 52.52 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 7149300 1984100 0 5165200 0 0 0 4315 1121 4363 19355;19356 12874;12875 12874 2 LEESYTLNSDLAR NVSLPRFKLEESYTLN TLNSDLARLGVQDLFN K L E A R L 1 1 1 1 0 0 2 0 0 0 3 0 0 0 0 2 1 0 1 0 0 13 0 1509.7311 B4E3A8;P30740;B4DNT0 B4E3A8 240 252 SERPINB1 Leukocyte elastase inhibitor yes no 2 0.0022319 69.345 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 3317000 0 1404600 0 289400 0 1622900 4316 166 4364 19357;19358;19359 12876;12877 12877 2 LEETLTREQK THKSSDNKLEETLTRE ETLTREQKEGAFSNFP K L E Q K E 0 1 0 0 0 1 3 0 0 0 2 1 0 0 0 0 2 0 0 0 0 10 1 1245.6565 F5H3H6;Q9BQ39 F5H3H6 126 135 DDX50 ATP-dependent RNA helicase DDX50 yes no 3 0.03626 55.064 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 3437800 0 678620 760370 283110 1062100 653580 4317 515 4365 19360;19361;19362;19363;19364 12878 12878 1 LEFNKAEKHVHNFMMDIQYTK LVAVVARKLEFNKAEK MMDIQYTKEMKESAAR K L E T K E 1 0 2 1 0 1 2 0 2 1 1 3 2 2 0 0 1 0 1 1 0 21 2 2622.2723 O15554 O15554 289 309 KCNN4 Intermediate conductance calcium-activated potassium channel protein 4 yes yes 3 0.024325 44.054 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 4318 708 4366 19365 12879 12879 71;72 1 LEGEPSVRKPK QAEDMNVKLEGEPSVR EPSVRKPKQRPRPEPL K L E P K Q 0 1 0 0 0 0 2 1 0 0 1 2 0 0 2 1 0 0 0 1 0 11 2 1238.6983 Q6PJG2;F6RU81 Q6PJG2 591 601 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 3 0.019431 70.399 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 6274300 858540 874040 721410 0 1324700 2495600 4319 1231 4367 19366;19367;19368;19369;19370 12880 12880 1 LEGSSGGIGERYK DSTRAIERLEGSSGGI GGIGERYKFLQEMRGY R L E Y K F 0 1 0 0 0 0 2 4 0 1 1 1 0 0 0 2 0 0 1 0 0 13 1 1351.6732 Q9Y5B6-3;Q9Y5B6-4;Q9Y5B6-2;Q9Y5B6 Q9Y5B6-3 430 442 PAXBP1 PAX3- and PAX7-binding protein 1 yes no 3 0.031258 44.426 By matching By matching By matching By matching By MS/MS By matching 1 218810 0 0 0 0 218810 0 4320 1652 4368 19371 12881 12881 1 LEGVLVNHNEPR VEQPPKPKLEGVLVNH LVNHNEPRSSSRIGLR K L E P R S 0 1 2 0 0 0 2 1 1 0 2 0 0 0 1 0 0 0 0 2 0 12 0 1375.7208 Q86TC9-2;F5H7I9;Q86TC9;F5GWA6 Q86TC9-2 303 314 MYPN Myopalladin yes no 3 0.037808 42.843 By matching By matching By MS/MS By matching By matching By matching 1 1 1 3656300 0 0 942610 0 1076300 1637500 4321 481 4369 19372;19373;19374 12882 12882 1 LEINVLK GKYREAARLEINVLKK RLEINVLKKIKEKDKE R L E L K K 0 0 1 0 0 0 1 0 0 1 2 1 0 0 0 0 0 0 0 1 0 7 0 827.51165 P49761-1;P49761;H3BUL5;H3BVF8;H3BQG1;P49761-3;G5E959 P49761-1 200 206 CLK3 Dual specificity protein kinase CLK3 yes no 2 0.022234 107.43 By matching By matching By matching By matching By matching By MS/MS 1 8689900 0 0 0 0 0 8689900 4322 944 4370 19375 12883 12883 1 LEKECQSSEESMGSNSMR LPCPDSQKLEKECQSS SMGSNSMRSILEEDEE K L E M R S 0 1 1 0 1 1 4 1 0 0 1 1 2 0 0 5 0 0 0 0 0 18 1 2087.8558 Q2TAK8;Q2TAK8-2 Q2TAK8 368 385 MUM1 PWWP domain-containing protein MUM1 yes no 3 0.019989 38.777 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1632200 0 0 703460 0 231070 697650 4323 1161 4371 19376;19377;19378 12884 12884 1 LELDALR ARENAAMRLELDALRG RLELDALRGKCEALQG R L E L R G 1 1 0 1 0 0 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 7 0 828.47052 Q9ULX9-2;Q9ULX9;B0QY71;B0QY70;O15525;O60675 Q9ULX9-2 73 79 MAFF;MAFG;MAFK Transcription factor MafF;Transcription factor MafG;Transcription factor MafK no no 2 0.040677 81.784 By matching By matching By matching By matching By matching By MS/MS 1 848320 0 0 0 0 0 848320 4324 1612;707 4372 19379 12885 12885 1 LELEVETVEKKK ASSLSKRKLELEVETV VETVEKKKKGRPRKDS K L E K K K 0 0 0 0 0 0 4 0 0 0 2 3 0 0 0 0 1 0 0 2 0 12 2 1443.8185 F5GYH8;F5GWE4;F5H4M2;P54198 F5GYH8 140 151 C22orf39;HIRA Protein HIRA yes no 3 0.040417 56.551 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1828800 0 0 884660 0 245240 698930 4325 483 4373 19380;19381;19382 12886 12886 1 LELTNETSENPTQSPWCSQYRR KCLQIPEKLELTNETS PWCSQYRRQLLKSLPE K L E R R Q 0 2 2 0 1 2 3 0 0 0 2 0 0 0 2 3 3 1 1 0 0 22 1 2695.2296 O60566-2;C9JLW5;O60566;O60566-3 O60566-2 590 611 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta yes no 3 0.0051716 39.905 By matching By matching By matching By matching By matching By MS/MS 1 2887400 0 0 0 0 0 2887400 4326 259 4374 19383 12887 12887 1 LELVDNKITTKK RSSSTKGKLELVDNKI DNKITTKKRSKSRSKE K L E K K R 0 0 1 1 0 0 1 0 0 1 2 3 0 0 0 0 2 0 0 1 0 12 2 1400.8239 F5H2U2;Q13523 F5H2U2 157 168 PRPF4B Serine/threonine-protein kinase PRP4 homolog yes no 3 0.012035 67.385 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1798100 520100 0 0 0 1278000 0 4327 514 4375 19384;19385 12888;12889 12889 2 LEMCSEIKGPQK VTQDVLKKLEMCSEIK SEIKGPQKEMIVKCFE K L E Q K E 0 0 0 0 1 1 2 1 0 1 1 2 1 0 1 1 0 0 0 0 0 12 1 1418.6898 Q9NUA8;F8WAI8;B1AKC8 Q9NUA8 265 276 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes no 3 0.0020552 76.332 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 3533800 0 958960 580430 880080 1114300 0 4328 1545 4376 19386;19387;19388;19389 12890 12890 1 LEMLLKENELK EIRQEYLKLEMLLKEN LLKENELKSFYQQQCH K L E L K S 0 0 1 0 0 0 3 0 0 0 4 2 1 0 0 0 0 0 0 0 0 11 1 1358.7479 Q8NI77 Q8NI77 443 453 KIF18A Kinesin-like protein KIF18A yes yes 3 0.0068574 69.65 By matching By matching By matching By MS/MS By matching By matching 1 1339100 0 0 0 1339100 0 0 4329 1332 4377 19390 12891 12891 1 LENEIQTYR QLLDIKIRLENEIQTY ENEIQTYRSLLEGEGS R L E Y R S 0 1 1 0 0 1 2 0 0 1 1 0 0 0 0 0 1 0 1 0 0 9 0 1164.5775 P13645;CON__P13645;CON__P02535-1 P13645 442 450 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.030316 64.374 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2278800 248960 1794700 235080 0 0 0 + 4330 298 4378 19391;19392;19393 12892 12892 1 LENTFCCQQK ENVDLLCKLENTFCCQ NTFCCQQKERREEEDI K L E Q K E 0 0 1 0 2 2 1 0 0 0 1 1 0 1 0 0 1 0 0 0 0 10 0 1326.5697 Q9NSV4-6;A8MYX0;Q9NSV4-5;C9JL55;Q9NSV4-4;C9JDG1;Q9NSV4;C9JDG0;Q9NSV4-1;A6NG52;Q9NSV4-7;Q9NSV4-2;F8W838 Q9NSV4-6 612 621 DIAPH3 Protein diaphanous homolog 3 yes no 2 0.01037 73.499 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 4852900 642500 740970 0 0 1624600 1844900 4331 54 4379 19394;19395;19396;19397 12893;12894;12895;12896;12897 12897 5 LENVSQLSLDKSPTEK FYQHNVEKLENVSQLS LDKSPTEKSTQYLNQH K L E E K S 0 0 1 1 0 1 2 0 0 0 3 2 0 0 1 3 1 0 0 1 0 16 1 1786.9313 Q86W56-3;Q86W56-2;Q86W56 Q86W56-3 18 33 PARG Poly(ADP-ribose) glycohydrolase yes no 3 0.0046251 51.03 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 8748900 2205400 2064800 0 1382300 1449600 1646800 4332 1268 4380 19398;19399;19400;19401;19402 12898;12899 12899 2 LEPKPQPPVAEATPR PVSQLQSRLEPKPQPP PVAEATPRSQEATEAA R L E P R S 2 1 0 0 0 1 2 0 0 0 1 1 0 0 5 0 1 0 0 1 0 15 1 1628.8886 Q9UHD8-3;Q9UHD8-7;Q9UHD8-2;Q9UHD8-5;Q9UHD8 Q9UHD8-3 59 73 SEPT9 Septin-9 yes no 3 0.0026574 58.885 By matching By matching By matching By matching By matching By MS/MS 1 1 3560500 0 0 0 0 1160100 2400300 4333 1593 4381 19403;19404 12900 12900 1 LEPLHFLQCHSK DGSQPAVKLEPLHFLQ HFLQCHSKNNSPQDLE K L E S K N 0 0 0 0 1 1 1 0 2 0 3 1 0 1 1 1 0 0 0 0 0 12 0 1507.7606 Q9UFC0 Q9UFC0 273 284 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes yes 3 0.012094 55.261 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 13167000 0 2447600 0 0 0 10719000 4334 1587 4382 19405;19406 12901;12902 12902 2 LEPNLGEDDEDKDLEPGPSGTSK DSTLKKMKLEPNLGED PGPSGTSKASAQISGQ K L E S K A 0 0 1 4 0 0 4 3 0 0 3 2 0 0 3 2 1 0 0 0 0 23 1 2441.1082 Q92797;Q92797-3;Q92797-2 Q92797 362 384 SYMPK Symplekin yes no 3 0.038152 40.622 By MS/MS By matching By matching By matching By matching By matching 1 1141000 1141000 0 0 0 0 0 4335 1360 4383 19407 12903 12903 0 LEPSTSTDQPVTPEPTSQATR TLVPTAPKLEPSTSTD EPTSQATRGRTNRSSV K L E T R G 1 1 0 1 0 2 2 0 0 0 1 0 0 0 4 3 5 0 0 1 0 21 0 2241.0761 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7 Q14676 1414 1434 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3 0.036053 31.488 By MS/MS By matching By matching By matching By matching By matching 1 1497000 1497000 0 0 0 0 0 4336 1109 4384 19408 12904 12904 1 LEPSTSTDQPVTPEPTSQATRGR TLVPTAPKLEPSTSTD TSQATRGRTNRSSVKT K L E G R T 1 2 0 1 0 2 2 1 0 0 1 0 0 0 4 3 5 0 0 1 0 23 1 2454.1987 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7 Q14676 1414 1436 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3 0.0075969 40.432 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 9474100 0 1768200 994490 1655800 2840200 2215300 4337 1109 4385 19409;19410;19411;19412;19413 12905 12905 1 LEPTNVQTVTCSPR AKNSSDAKLEPTNVQT QTVTCSPRVKALPLSP K L E P R V 0 1 1 0 1 1 1 0 0 0 1 0 0 0 2 1 3 0 0 2 0 14 0 1600.7879 Q99741 Q99741 34 47 CDC6 Cell division control protein 6 homolog yes yes 2 0.0002076 88.78 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 18919000 2510100 3853300 3012400 2232200 1334100 5976800 4338 1431 4386 19414;19415;19416;19417;19418;19419 12906;12907;12908;12909;12910;12911;12912;12913 12913 8 LEQCNTELK SLKQLFRKLEQCNTEL EQCNTELKKYSHVNKK K L E L K K 0 0 1 0 1 1 2 0 0 0 2 1 0 0 0 0 1 0 0 0 0 9 0 1133.5387 Q9UQE7 Q9UQE7 969 977 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.032422 63.426 By matching By matching By matching By matching By MS/MS By matching 1 1 579460 0 0 366600 0 212860 0 4339 1625 4387 19420;19421 12914 12914 1 LEQEAGARQPPPAPR QQLQNQIRLEQEAGAR RQPPPAPRSAPPSPPF R L E P R S 3 2 0 0 0 2 2 1 0 0 1 0 0 0 4 0 0 0 0 0 0 15 1 1615.8431 Q8WX93-3;Q8WX93 Q8WX93-3 287 301 PALLD Palladin yes no 3 0.01808 43.594 By matching By matching By matching By matching By matching By MS/MS 1 1 3169700 0 0 0 0 403110 2766600 4340 1343 4388 19422;19423 12915 12915 1 LEQGTSALIR KRSASTEKLEQGTSAL QGTSALIRQMPLSSAG K L E I R Q 1 1 0 0 0 1 1 1 0 1 2 0 0 0 0 1 1 0 0 0 0 10 0 1086.6033 Q8IWC1-2;Q8IWC1;H7BY77 Q8IWC1-2 189 198 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.0020268 102.52 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 13174000 2409000 0 2765000 1269900 1698800 5031400 4341 1280 4389 19424;19425;19426;19427;19428;19429 12916;12917;12918;12919;12920;12921 12917 6 LEQIQSKDSLDEK EKNGADEKLEQIQSKD SKDSLDEKNKADNNID K L E E K N 0 0 0 2 0 2 2 0 0 1 2 2 0 0 0 2 0 0 0 0 0 13 1 1531.773 Q6VMQ6-2;G3V1U0;Q6VMQ6;F5GX74;A8MV73 Q6VMQ6-2 326 338 ATF7IP Activating transcription factor 7-interacting protein 1 yes no 2 0.00353 78.903 By matching By MS/MS By matching By matching By matching By matching 1 1 1 19173000 0 7111300 0 2370000 0 9691300 4342 488 4390 19430;19431;19432 12922 12922 1 LEQLERTAEEQR YLDMISRKLEQLERTA ERTAEEQRLFLMDREE K L E Q R L 1 2 0 0 0 2 4 0 0 0 2 0 0 0 0 0 1 0 0 0 0 12 1 1500.7532 Q5CZC0-2;Q5CZC0;Q8NAU3;H0Y515 Q5CZC0-2 215 226 FSIP2 Fibrous sheath-interacting protein 2 yes no 3 0.013198 56.551 By matching By matching By matching By matching By matching By MS/MS 1 1 5559200 0 2050100 0 0 0 3509100 4343 1179 4391 19433;19434 12923 12923 1 LEQNLSGEEHLQELLK KVASLEKRLEQNLSGE EHLQELLKEKTLAEQN R L E L K E 0 0 1 0 0 2 4 1 1 0 5 1 0 0 0 1 0 0 0 0 0 16 0 1878.9687 H0YE54;Q92805 H0YE54 83 98 GOLGA1 Golgin subfamily A member 1 yes no 3;4 0.00032581 71.031 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 2 2 2 1 37181000 5371300 4800300 6628400 4304600 9677400 6399300 4344 617 4392 19435;19436;19437;19438;19439;19440;19441;19442;19443 12924;12925;12926;12927 12927 4 LEQPDLSSEMSK PEQESLSRLEQPDLSS DLSSEMSKVSKPRASK R L E S K V 0 0 0 1 0 1 2 0 0 0 2 1 1 0 1 3 0 0 0 0 0 12 0 1362.6337 Q8WUA4;Q8WUA4-2;C9JNH7 Q8WUA4 79 90 GTF3C2 General transcription factor 3C polypeptide 2 yes no 2 1.9624E-37 119.39 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 12364000 0 3205900 2536400 965170 0 5656600 4345 1340 4393 19444;19445;19446;19447 12928 12928 1 LEQQCQKQQEQADSLER ALRAEVSKLEQQCQKQ EQADSLERSLEAERAS K L E E R S 1 1 0 1 1 6 3 0 0 0 2 1 0 0 0 1 0 0 0 0 0 17 1 2116.9807 Q14980-2;Q14980;F5H2L0 Q14980-2 1132 1148 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.0010673 81.346 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 2 1 1 1 36576000 15009000 9249500 0 4622500 7695600 0 4346 1121 4394 19448;19449;19450;19451;19452 12929;12930;12931;12932;12933;12934;12935 12934 7 LEQYTSAIEGTK IVSKIDSRLEQYTSAI TSAIEGTKSAKPTKPA R L E T K S 1 0 0 0 0 1 2 1 0 1 1 1 0 0 0 1 2 0 1 0 0 12 0 1338.6667 Q05682-5;E9PGZ1;Q05682-4;F5H1Z9;E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;C9J813;E7EUR9 Q05682-5 418 429 CALD1 Caldesmon yes no 2 0.0017862 77.644 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 12490000 610870 1623300 1092500 3183100 2253100 3727300 4347 396 4395 19453;19454;19455;19456;19457;19458 12936;12937;12938 12937 3 LERPPETPTVDPTVK LKKVKLRKLERPPETP PTVDPTVKYERQPEYL K L E V K Y 0 1 0 1 0 0 2 0 0 0 1 1 0 0 4 0 3 0 0 2 0 15 1 1677.8938 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 671 685 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 1.4079E-08 98.421 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 147900000 2720900 29659000 26234000 1005900 3793900 84491000 4348 486 4396 19459;19460;19461;19462;19463;19464;19465 12939;12940;12941;12942;12943;12944;12945;12946 12945 8 LERPPETPTVDPTVKYER LKKVKLRKLERPPETP DPTVKYERQPEYLDAT K L E E R Q 0 2 0 1 0 0 3 0 0 0 1 1 0 0 4 0 3 0 1 2 0 18 2 2126.1008 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 671 688 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 4 0.01264 53.504 By matching By matching By MS/MS By matching By matching By matching 2 2208600 0 0 2208600 0 0 0 4349 486 4397 19466;19467 12947;12948 12947 0 LESESTSPSLEMK SSEVSKPKLESESTSP TSPSLEMKIHNFLKGN K L E M K I 0 0 0 0 0 0 3 0 0 0 2 1 1 0 1 4 1 0 0 0 0 13 0 1436.6705 Q5VT52-3;Q5VT52;B4E2Q6;Q5VT52-2 Q5VT52-3 633 645 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes no 2 0.020632 65.295 By matching By MS/MS By matching By matching By matching By matching 1 1 1613700 0 547890 0 0 0 1065800 4350 1202 4398 19468;19469 12949 12949 0 LESLDALEPEEK KNKGRKRKLESLDALE DALEPEEKAEDCWELQ K L E E K A 1 0 0 1 0 0 4 0 0 0 3 1 0 0 1 1 0 0 0 0 0 12 0 1371.6769 Q14807;B7Z265;H3BRB3 Q14807 560 571 KIF22 Kinesin-like protein KIF22 yes no 2 4.8311E-290 190.66 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 427420000 19248000 310650000 31041000 10901000 3674700 51897000 4351 1115 4399 19470;19471;19472;19473;19474;19475 12950;12951;12952;12953;12954 12954 5 LESLEETNPEYAK PSSAPAVKLESLEETN ETNPEYAKIHDLLKTI K L E A K I 1 0 1 0 0 0 4 0 0 0 2 1 0 0 1 1 1 0 1 0 0 13 0 1521.7199 Q5VUA4;Q5VUA4-2 Q5VUA4 579 591 ZNF318 Zinc finger protein 318 yes no 2 5.1177E-05 89.231 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1185200 0 1185200 0 0 0 0 4352 1205 4400 19476;19477 12955;12956 12955 2 LESNNYNTYR DECFFFERLESNNYNT SNNYNTYRSRKYTSWY R L E Y R S 0 1 3 0 0 0 1 0 0 0 1 0 0 0 0 1 1 0 2 0 0 10 0 1272.5735 P09038-2;P09038-3;P09038-1;P09038 P09038-2 107 116 FGF2 Fibroblast growth factor 2 yes no 2 0.0012985 104.22 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 2 7725900 549370 497430 517940 378930 2381800 3400400 4353 809 4401 19478;19479;19480;19481;19482;19483;19484 12957;12958;12959;12960;12961 12958 5 LESSEGEIIQTVDR EELIESPKLESSEGEI EIIQTVDRQSVKSPEV K L E D R Q 0 1 0 1 0 1 3 1 0 2 1 0 0 0 0 2 1 0 0 1 0 14 0 1574.7788 Q99590-2;F8VXG7;Q99590;F8W028 Q99590-2 296 309 SCAF11 Protein SCAF11 yes no 2 1.4009E-12 101.75 By matching By MS/MS By matching By matching By matching By matching 1 5426500 0 5426500 0 0 0 0 4354 547 4402 19485 12962 12962 1 LESTESRSSFSQHAR GSVTKKRKLESTESRS SSFSQHARTSGRVAVE K L E A R T 1 2 0 0 0 1 2 0 1 0 1 0 0 1 0 5 1 0 0 0 0 15 1 1720.8129 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCJ4;Q5TCI8 P02545 421 435 LMNA Prelamin-A/C;Lamin-A/C yes no 4 0.0087689 48.467 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 5486300 0 893010 1365800 1483800 820200 923410 4355 783 4403 19486;19487;19488;19489;19490 12963;12964;12965 12964 3 LESVFFHSLSGSK KPSTETRKLESVFFHS FHSLSGSKSSRRNFKE K L E S K S 0 0 0 0 0 0 1 1 1 0 2 1 0 2 0 4 0 0 0 1 0 13 0 1436.73 Q8NEF9 Q8NEF9 340 352 SRFBP1 Serum response factor-binding protein 1 yes yes 3 4.5258E-09 101.39 By matching By MS/MS By matching By matching By matching By matching 1 9598800 0 9598800 0 0 0 0 4356 1322 4404 19491 12966 12966 1 LETLGSASTSTPGRR KVRRSYSRLETLGSAS STSTPGRRSCFGFEGL R L E R R S 1 2 0 0 0 0 1 2 0 0 2 0 0 0 1 3 3 0 0 0 0 15 1 1531.7954 Q96FF9;B5MBX0 Q96FF9 149 163 CDCA5 Sororin yes no 3 0.0019071 56.139 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 5791800 235070 1008900 0 515700 2133100 1899000 4357 169 4405 19492;19493;19494;19495;19496 12967;12968 12967 2 LETNPDIKPSNVEPMEK KELEKKRKLETNPDIK SNVEPMEKEFGLCKTE K L E E K E 0 0 2 1 0 0 3 0 0 1 1 2 1 0 3 1 1 0 0 1 0 17 1 1939.9561 Q9BVP2-2;Q9BVP2;C9JYH9;C9JZT7;B4DMU5 Q9BVP2-2 80 96 GNL3 Guanine nucleotide-binding protein-like 3 yes no 3 0.003885 64.588 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 25991000 0 1837800 3726200 8299400 8255300 3872400 4358 1455 4406 19497;19498;19499;19500;19501 12969;12970 12970 2 LETTKKPDNVPK DISRLRRKLETTKKPD KKPDNVPKCDEILMEE K L E P K C 0 0 1 1 0 0 1 0 0 0 1 3 0 0 2 0 2 0 0 1 0 12 2 1368.7613 Q5VTR2 Q5VTR2 893 904 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 3 0.00013796 100.04 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2049000 0 758710 0 176840 0 1113400 4359 1204 4407 19502;19503;19504 12971;12972 12972 2 LETVKVSNNAEDPK PREEKEEKLETVKVSN SNNAEDPKDLMLSGER K L E P K D 1 0 2 1 0 0 2 0 0 0 1 2 0 0 1 1 1 0 0 2 0 14 1 1542.789 E9PFZ0;P38398-4;P38398-2;P38398;E9PFC7;E7EP70;F8W8H7;E7EMP0 E9PFZ0 688 701 BRCA1 Breast cancer type 1 susceptibility protein yes no 3 0.0011279 74.987 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 11879000 1299800 2591400 2520500 1384600 2451000 1631700 4360 426 4408 19505;19506;19507;19508;19509;19510 12973;12974;12975;12976;12977 12975 5 LEVAESEFTH TTSTTLEKLEVAESEF VAESEFTH________ K L E T H - 1 0 0 0 0 0 3 0 1 0 1 0 0 1 0 1 1 0 0 1 0 10 0 1160.535 Q99755-2;Q99755-3;A6PW57;Q99755;Q99755-4 Q99755-2 491 500 PIP5K1A Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha yes no 2 0.037757 44.318 By matching By matching By MS/MS By matching By matching By matching 1 1 3535000 0 0 2938400 0 596560 0 4361 32 4409 19511;19512 12978 12978 1 LEVLESQLSEGSQK ALHARKHKLEVLESQL QLSEGSQKHASLQKSI K L E Q K H 0 0 0 0 0 2 3 1 0 0 3 1 0 0 0 3 0 0 0 1 0 14 0 1545.7886 D6RCT6;D6R9E3;Q9BWT6 D6RCT6 71 84 MND1 Meiotic nuclear division protein 1 homolog yes no 2 0 198.81 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 2 74326000 30147000 4272400 14356000 4232100 3318500 18000000 4362 316 4410 19513;19514;19515;19516;19517;19518;19519;19520 12979;12980;12981;12982;12983;12984 12984 6 LEVQAEEER RRQEIEQKLEVQAEEE EVQAEEERKQVENERR K L E E R K 1 1 0 0 0 1 4 0 0 0 1 0 0 0 0 0 0 0 0 1 0 9 0 1101.5302 Q9H307;Q9H307-2 Q9H307 177 185 PNN Pinin yes no 2 0.012117 82.029 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 8357100 2501800 0 0 0 5855400 0 4363 1486 4411 19521;19522 12985;12986 12985 2 LEVQATDREENK RLEEQLMKLEVQATDR ATDREENKQIALGTSK K L E N K Q 1 1 1 1 0 1 3 0 0 0 1 1 0 0 0 0 1 0 0 1 0 12 1 1430.7001 P11387 P11387 701 712 TOP1 DNA topoisomerase 1 yes yes 2;3 5.2804E-18 113.69 By matching By matching By matching By matching By MS/MS By matching 2 1 1 2 1 7163900 1613000 843030 109850 0 3742100 855940 4364 825 4412 19523;19524;19525;19526;19527;19528;19529 12987;12988 12988 2 LEVQATDREENKQIALGTSK RLEEQLMKLEVQATDR QIALGTSKLNYLDPRI K L E S K L 2 1 1 1 0 2 3 1 0 1 2 2 0 0 0 1 2 0 0 1 0 20 2 2229.1601 P11387 P11387 701 720 TOP1 DNA topoisomerase 1 yes yes 3;4 0.00018504 77.08 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 2 30462000 4552200 0 0 0 16419000 9490900 4365 825 4413 19530;19531;19532;19533 12989;12990;12991 12989 3 LEVTEIVKPSPK SSSMKISKLEVTEIVK EIVKPSPKRKMEPDTE K L E P K R 0 0 0 0 0 0 2 0 0 1 1 2 0 0 2 1 1 0 0 2 0 12 1 1338.7759 Q7Z6E9;Q7Z6E9-2 Q7Z6E9 1170 1181 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 2;3 0.016357 56.956 By MS/MS By matching By matching By matching By matching By MS/MS 2 2 1 1 2 11367000 3838400 0 1548200 851630 1298900 3830100 4366 1255 4414 19534;19535;19536;19537;19538;19539;19540;19541 12992;12993 12993 2 LEYNYNSHNVYIMADKQK DGNILGHKLEYNYNSH YIMADKQKNGIKVNFK K L E Q K N 1 0 3 1 0 1 1 0 1 1 1 2 1 0 0 1 0 0 3 1 0 18 1 2229.0525 CON__Q9U6Y5 CON__Q9U6Y5 141 158 yes yes 3;4 6.1409E-45 114.01 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 8157000 0 4962500 1937800 0 0 1256700 + 4367 310 4415 19542;19543;19544 12994;12995 12994 2 LFAECHVINPSK YFDGNLEKLFAECHVI CHVINPSKKSRTRQMN K L F S K K 1 0 1 0 1 0 1 0 1 1 1 1 0 1 1 1 0 0 0 1 0 12 0 1413.7075 H0Y2Q2;Q9Y4X5 H0Y2Q2 127 138 ARIH1 E3 ubiquitin-protein ligase ARIH1 yes no 3 0.00038854 94.402 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 10170000 1533500 1712800 2053400 847160 1887900 2134800 4368 603 4416 19545;19546;19547;19548;19549;19550 12996;12997;12998 12997 3 LFCTSCNVVLNHVRK ELHEDGGKLFCTSCNV VVLNHVRKSAISDHLK K L F R K S 0 1 2 0 2 0 0 0 1 0 2 1 0 1 0 1 1 0 0 3 0 15 1 1845.9342 Q9UFW8;C9JUJ0 Q9UFW8 41 55 CGGBP1 CGG triplet repeat-binding protein 1 yes no 3;4 5.3059E-56 126.5 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 2 2 2 1 94292000 24305000 5343500 43560000 8222800 3447500 9412600 4369 1588 4417 19551;19552;19553;19554;19555;19556;19557;19558;19559;19560 12999;13000;13001;13002;13003;13004;13005;13006 13001 8 LFDEEEDSSEK EDDDSNEKLFDEEEDS EEEDSSEKLFDDSDER K L F E K L 0 0 0 2 0 0 4 0 0 0 1 1 0 1 0 2 0 0 0 0 0 11 0 1326.5463 O43719;E9PFP2 O43719 706 716 HTATSF1 HIV Tat-specific factor 1 yes no 2 0.01798 57.164 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2263500 0 546110 589400 0 0 1128000 4370 720 4418 19561;19562;19563 13007;13008 13007 2 LFEAVEEGR STLRFVDKLFEAVEEG FEAVEEGRSSRHSKSS K L F G R S 1 1 0 0 0 0 3 1 0 0 1 0 0 1 0 0 0 0 0 1 0 9 0 1048.5189 E7EVD1;O43395 E7EVD1 66 74 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes no 2 0.021779 68.847 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 3905700 1329600 0 0 237100 1173200 1165800 4371 389 4419 19564;19565;19566;19567 13009 13009 1 LFECNECGK QNTHTGEKLFECNECG FECNECGKSFSQKENL K L F G K S 0 0 1 0 2 0 2 1 0 0 1 1 0 1 0 0 0 0 0 0 0 9 0 1155.4689 Q15072 Q15072 71 79 ZNF146 Zinc finger protein OZF yes yes 2 0.00098892 108.57 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 8022300 0 0 1487500 1159400 2565400 2810000 4372 1131 4420 19568;19569;19570;19571 13010;13011;13012 13012 3 LFEDDDSNEK EVEDADEKLFEDDDSN EDDDSNEKLFDEEEDS K L F E K L 0 0 1 3 0 0 2 0 0 0 1 1 0 1 0 1 0 0 0 0 0 10 0 1210.499 O43719;E9PFP2 O43719 696 705 HTATSF1 HIV Tat-specific factor 1 yes no 2 0.0052855 86.898 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 2225500 0 395990 696010 0 0 1133500 4373 720 4421 19572;19573;19574 13013;13014;13015 13014 3 LFEDLKEDDK QLKTEFDKLFEDLKED EDLKEDDKTHEMEPAE K L F D K T 0 0 0 3 0 0 2 0 0 0 2 2 0 1 0 0 0 0 0 0 0 10 1 1250.603 Q14527;Q14527-2;E7ESN4;F5H3D6 Q14527 217 226 HLTF Helicase-like transcription factor yes no 2;3 4.1744E-61 142.98 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 2 1 2 2 16200000 649960 4902400 2722100 341420 1228000 6356400 4374 1107 4422 19575;19576;19577;19578;19579;19580;19581;19582;19583;19584 13016;13017;13018;13019;13020;13021 13021 6 LFEQEVAQREAQK LSTEERRKLFEQEVAQ VAQREAQKQQQQMQNL K L F Q K Q 2 1 0 0 0 3 3 0 0 0 1 1 0 1 0 0 0 0 0 1 0 13 1 1574.8053 Q9BYW2;F2Z317 Q9BYW2 2124 2136 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 3 0.0022763 66.267 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3635400 0 969650 0 221730 634500 1809500 4375 479 4423 19585;19586;19587;19588 13022;13023 13022 2 LFIGGLNTETNEK VEADRPGKLFIGGLNT LNTETNEKALETVFGK K L F E K A 0 0 2 0 0 0 2 2 0 1 2 1 0 1 0 0 2 0 0 0 0 13 0 1434.7355 Q96E39;H3BT71;P38159-2;P38159;H0Y6E7;H3BNC1;H3BR27;P38159-3 Q96E39 10 22 RBMXL1;RBMX RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed no no 2 8.6295E-132 159.5 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 338110000 111760000 46235000 50125000 15420000 24576000 89994000 4376 1379;649 4424 19589;19590;19591;19592;19593;19594 13024;13025;13026;13027;13028;13029 13028 6 LFIIRGSPQQIDHAK PNGDPNFKLFIIRGSP PQQIDHAKQLIEEKIE K L F A K Q 1 1 0 1 0 2 0 1 1 3 1 1 0 1 1 1 0 0 0 0 0 15 1 1721.9577 Q92945-2;Q92945 Q92945-2 474 488 KHSRP Far upstream element-binding protein 2 yes no 2;3;4 1.1065E-20 108.97 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 4 2 5 12 3 3004300000 359990000 265160000 1143200000 331960000 156320000 747680000 4377 1366 4425 19595;19596;19597;19598;19599;19600;19601;19602;19603;19604;19605;19606;19607;19608;19609;19610;19611;19612;19613;19614;19615;19616;19617;19618;19619;19620;19621;19622;19623;19624;19625 13030;13031;13032;13033;13034;13035;13036;13037;13038;13039;13040;13041;13042;13043;13044;13045;13046;13047;13048;13049;13050;13051;13052;13053;13054;13055;13056 13032 27 LFIVESNSSSSTR EEMKVSAKLFIVESNS SNSSSSTRSAVDMACS K L F T R S 0 1 1 0 0 0 1 0 0 1 1 0 0 1 0 5 1 0 0 1 0 13 0 1425.71 P48507 P48507 95 107 GCLM Glutamate--cysteine ligase regulatory subunit yes yes 2 0.0017341 86.262 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 6900000 0 2346400 818020 0 1411200 2324400 4378 931 4426 19626;19627;19628;19629 13057;13058 13057 2 LFKQDTSSSTTHLAQQLK NTKAIQERLFKQDTSS THLAQQLKQERQKELA R L F L K Q 1 0 0 1 0 3 0 0 1 0 3 2 0 1 0 3 3 0 0 0 0 18 1 2032.0589 Q9NQW6;Q9NQW6-2 Q9NQW6 411 428 ANLN Actin-binding protein anillin yes no 3;4 0.001781 55.975 By matching By MS/MS By matching By matching By matching By matching 2 2 2 1 1 2 13451000 2920300 2702400 3315500 406530 617330 3488500 4379 1533 4427 19630;19631;19632;19633;19634;19635;19636;19637;19638;19639 13059;13060;13061 13060 3 LFKQDTSSSTTHLAQQLKQER NTKAIQERLFKQDTSS AQQLKQERQKELACLR R L F E R Q 1 1 0 1 0 4 1 0 1 0 3 2 0 1 0 3 3 0 0 0 0 21 2 2445.2612 Q9NQW6;Q9NQW6-2 Q9NQW6 411 431 ANLN Actin-binding protein anillin yes no 4 0.025721 34.148 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 5688100 1231700 711800 1759000 0 634230 1351400 4380 1533 4428 19640;19641;19642;19643;19644 13062 13062 1 LFNEHIEALTK LEREEKEKLFNEHIEA EHIEALTKKKREHFRQ K L F T K K 1 0 1 0 0 0 2 0 1 1 2 1 0 1 0 0 1 0 0 0 0 11 0 1313.698 O14776-2;O14776;G3V220 O14776-2 924 934 TCERG1 Transcription elongation regulator 1 yes no 3 0.00036342 96.604 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 17701000 4756400 0 0 1031400 0 11913000 4381 696 4429 19645;19646;19647;19648 13063;13064;13065;13066;13067 13067 5 LFNEVQEK RIIRKVVKLFNEVQEK LFNEVQEKAIEEQMVA K L F E K A 0 0 1 0 0 1 2 0 0 0 1 1 0 1 0 0 0 0 0 1 0 8 0 1005.5131 Q9H0A0;E7ESU4;E9PMN9 Q9H0A0 905 912 NAT10 N-acetyltransferase 10 yes no 2 0.021976 78.264 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4131300 439620 596860 0 0 1737900 1356900 4382 1477 4430 19649;19650;19651;19652 13068 13068 1 LFNHANQEVQR QAVPRLVKLFNHANQE HANQEVQRHATGAMRN K L F Q R H 1 1 2 0 0 2 1 0 1 0 1 0 0 1 0 0 0 0 0 1 0 11 0 1354.6742 Q9Y446 Q9Y446 369 379 PKP3 Plakophilin-3 yes yes 2;3 3.0489E-06 106.62 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 2 1 1 1 2 1 11940000 1473100 1564400 1054400 997310 2864400 3986500 4383 1650 4431 19653;19654;19655;19656;19657;19658;19659;19660 13069;13070;13071;13072;13073;13074;13075;13076 13076 8 LFNTPTENGSLGQSR PSIVPSEKLFNTPTEN NGSLGQSRLMMEHFEK K L F S R L 0 1 2 0 0 1 1 2 0 0 2 0 0 1 1 2 2 0 0 0 0 15 0 1619.7903 O75132 O75132 1134 1148 ZBED4 Zinc finger BED domain-containing protein 4 yes yes 2 0.0053654 52.599 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3062400 0 502210 240680 0 757090 1562400 4384 737 4432 19661;19662;19663;19664 13077 13077 1 LFPDTPLALDANKKK AALAALEKLFPDTPLA ALDANKKKRAPVPVRG K L F K K R 2 0 1 2 0 0 0 0 0 0 3 3 0 1 2 0 1 0 0 0 0 15 2 1669.9403 Q12906-5;Q12906-4;Q12906-2;Q12906-6;Q12906-3;C9JFV5;Q12906;G5E9M5;B4DFG4 Q12906-5 588 602 ILF3 Interleukin enhancer-binding factor 3 yes no 3;4 0.00048365 86.756 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 2 34770000 6520200 8837800 0 0 0 19411000 4385 243 4433 19665;19666;19667;19668 13078;13079;13080;13081 13080 4 LFQGYETEER DNEKERHKLFQGYETE QGYETEEREETELSEK K L F E R E 0 1 0 0 0 1 3 1 0 0 1 0 0 1 0 0 1 0 1 0 0 10 0 1270.583 Q68DK7;Q68DK7-3;Q68DK7-2 Q68DK7 282 291 MSL1 Male-specific lethal 1 homolog yes no 2 1.5501E-34 131.09 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 12205000 0 2685600 0 0 1464200 8055600 4386 1218 4434 19669;19670;19671 13082;13083;13084 13082 3 LFQPVQYGQKPEGR AAKLKASRLFQPVQYG YGQKPEGRTVAFPSTH R L F G R T 0 1 0 0 0 3 1 2 0 0 1 1 0 1 2 0 0 0 1 1 0 14 1 1645.8576 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A7E2D7 Q96L91-4 1427 1440 EP400 E1A-binding protein p400 yes no 3 0.039271 39.629 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 5836300 969810 0 1009200 709310 1162600 1985300 4387 1405 4435 19672;19673;19674;19675;19676 13085 13085 1 LFREPSQADIALLK VQEIPVSRLFREPSQA QADIALLKLSRPAIIT R L F L K L 2 1 0 1 0 1 1 0 0 1 3 1 0 1 1 1 0 0 0 0 0 14 1 1599.8984 CON__P06868 CON__P06868 659 672 yes yes 3 2.7107E-171 162.72 By matching By MS/MS By matching By matching By matching By matching 1 66309000 0 66309000 0 0 0 0 + 4388 295 4436 19677 13086 13086 1 LFSGLSVSSEGPSQR FRVESPVKLFSGLSVS SSEGPSQRLGTPKSVN K L F Q R L 0 1 0 0 0 1 1 2 0 0 2 0 0 1 1 5 0 0 0 1 0 15 0 1549.7736 A8MTM6;Q15398;Q15398-1 A8MTM6 622 636 DLGAP5 Disks large-associated protein 5 yes no 2 0.027277 40.493 By matching By matching By matching By matching By matching By MS/MS 1 20255000 0 0 0 0 0 20255000 4389 42 4437 19678 13087 13087 1 LFSGLSVSSEGPSQRLGTPK FRVESPVKLFSGLSVS SQRLGTPKSVNKAVSQ K L F P K S 0 1 0 0 0 1 1 3 0 0 3 1 0 1 2 5 1 0 0 1 0 20 1 2046.0746 A8MTM6;Q15398;Q15398-1 A8MTM6 622 641 DLGAP5 Disks large-associated protein 5 yes no 3 2.563E-38 108.47 By matching By MS/MS By MS/MS By MS/MS By matching By matching 2 1 1 1 85942000 0 38720000 23614000 21196000 2410800 0 4390 42 4438 19679;19680;19681;19682;19683 13088;13089;13090 13089 3 LFSQDECAK KSGIRQMRLFSQDECA FSQDECAKIEARIDEV R L F A K I 1 0 0 1 1 1 1 0 0 0 1 1 0 1 0 1 0 0 0 0 0 9 0 1096.4859 Q6P6C2-2;Q6P6C2;F5H6G2 Q6P6C2-2 94 102 ALKBH5 RNA demethylase ALKBH5 yes no 2 0.012883 80.688 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 12534000 697090 1709800 2203100 674410 1544000 5705800 4391 1227 4439 19684;19685;19686;19687;19688;19689 13091;13092;13093;13094 13094 4 LFSSQYGK GFSGAGEKLFSSQYGK LFSSQYGKMANKANTS K L F G K M 0 0 0 0 0 1 0 1 0 0 1 1 0 1 0 2 0 0 1 0 0 8 0 928.46543 P49792;E9PGT0 P49792 1978 1985 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase no no 2 0.014947 86.833 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 34679000 3883500 5714100 6981600 4032200 5969700 8097900 4392 945 4440 19690;19691;19692;19693;19694;19695 13095;13096;13097;13098 13096 4 LFSSSASSNEVKYEK PLSADLTKLFSSSASS SNEVKYEKSAELSGEF K L F E K S 1 0 1 0 0 0 2 0 0 0 1 2 0 1 0 5 0 0 1 1 0 15 1 1674.8101 Q9BY89 Q9BY89 514 528 KIAA1671 Uncharacterized protein KIAA1671 yes yes 3 0.00151 68.168 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 5634200 0 1243200 1064400 420540 467850 2438200 4393 1466 4441 19696;19697;19698;19699;19700 13099;13100;13101 13099 2 LFTSDSSTTKENSK ALPRRSSRLFTSDSST STTKENSKKLKMKFPP R L F S K K 0 0 1 1 0 0 1 0 0 0 1 2 0 1 0 4 3 0 0 0 0 14 1 1543.7366 B4DL80;G5EA36;P30260;G3V1C4 B4DL80 320 333 CDC27 Cell division cycle protein 27 homolog yes no 3 9.7201E-05 89.747 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 12249000 1739200 1327800 2722300 1095700 2282300 3081700 4394 95 4442 19701;19702;19703;19704;19705;19706 13102;13103;13104;13105;13106;13107 13104 6 LGAGEGGEASVSPEK PRSKKKKKLGAGEGGE EASVSPEKTSTTSKGK K L G E K T 2 0 0 0 0 0 3 4 0 0 1 1 0 0 1 2 0 0 0 1 0 15 0 1386.6627 Q13428-7;E7ETY2;Q13428-6;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 1368 1382 TCOF1 Treacle protein no no 2 4.6978E-06 93.909 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 25041000 7795500 2242400 2234500 3062100 5743400 3963000 4395 1082;383 4443 19707;19708;19709;19710;19711;19712;19713 13108;13109;13110;13111 13108 4 LGAKGDFPTGK KTSESRDKLGAKGDFP KGDFPTGKSSFSITRE K L G G K S 1 0 0 1 0 0 0 3 0 0 1 2 0 1 1 0 1 0 0 0 0 11 1 1089.5819 Q9Y2W1 Q9Y2W1 548 558 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 2.5691E-12 114.76 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 15171000 1368400 0 3251100 2831600 5924400 1796000 4396 1639 4444 19714;19715;19716;19717;19718 13112;13113;13114;13115 13115 4 LGAPAAGGEEEWGQQQR CHDSEASKLGAPAAGG EEWGQQQRQLGKKKHR K L G Q R Q 3 1 0 0 0 3 3 4 0 0 1 0 0 0 1 0 0 1 0 0 0 17 0 1782.8285 O94992 O94992 130 146 HEXIM1 Protein HEXIM1 yes yes 2 0.0024445 61.495 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 8937300 0 1713200 1132300 982820 196530 4912400 4397 760 4445 19719;19720;19721;19722;19723 13116;13117 13116 2 LGAQLADLHLDNK HLSSHAAKLGAQLADL ADLHLDNKKLGEMRLK K L G N K K 2 0 1 2 0 1 0 1 1 0 4 1 0 0 0 0 0 0 0 0 0 13 0 1406.7518 Q9HA64;I3L1I7;I3L139;F5H4E4;I3L2G3 Q9HA64 103 115 FN3KRP Ketosamine-3-kinase yes no 2;3 4.4455E-74 138.24 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 2 113500000 0 44913000 25020000 9674500 0 33893000 4398 1511 4446 19724;19725;19726;19727;19728 13118;13119;13120;13121;13122 13118 5 LGAQLADLHLDNKK HLSSHAAKLGAQLADL DLHLDNKKLGEMRLKE K L G K K L 2 0 1 2 0 1 0 1 1 0 4 2 0 0 0 0 0 0 0 0 0 14 1 1534.8467 Q9HA64;I3L1I7;I3L139;F5H4E4;I3L2G3 Q9HA64 103 116 FN3KRP Ketosamine-3-kinase yes no 2;3 5.4694E-104 143.55 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 1 2 136410000 23160000 28681000 45833000 13527000 1179100 24030000 4399 1511 4447 19729;19730;19731;19732;19733;19734;19735;19736;19737 13123;13124;13125;13126;13127;13128;13129 13124 7 LGASNSPGQPNSVK PKIGLSLKLGASNSPG PGQPNSVKRKKLPVDS K L G V K R 1 0 2 0 0 1 0 2 0 0 1 1 0 0 2 3 0 0 0 1 0 14 0 1354.6841 P49756 P49756 672 685 RBM25 RNA-binding protein 25 yes yes 2 6.0855E-05 91.712 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 15443000 2767300 1582400 2228500 1481300 3202700 4180400 4400 942 4448 19738;19739;19740;19741;19742;19743 13130;13131;13132;13133;13134 13131 5 LGASNSPGQPNSVKRK PKIGLSLKLGASNSPG QPNSVKRKKLPVDSVF K L G R K K 1 1 2 0 0 1 0 2 0 0 1 2 0 0 2 3 0 0 0 1 0 16 2 1638.8802 P49756 P49756 672 687 RBM25 RNA-binding protein 25 yes yes 3;4 0.0017424 68.044 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 3 2 23180000 3064000 3294400 3365800 3913700 4765800 4776200 4401 942 4449 19744;19745;19746;19747;19748;19749;19750;19751;19752;19753;19754;19755 13135;13136;13137;13138;13139 13135 5 LGAVPATSGPTTFK ________________ TSGPTTFKQQRSTRIV R L G F K Q 2 0 0 0 0 0 0 2 0 0 1 1 0 1 2 1 3 0 0 1 0 14 0 1345.7242 B4DSM5;G3XAG1;Q96ME7 B4DSM5 5 18 ZNF512 Zinc finger protein 512 yes no 2 0.027147 50.659 By matching By matching By matching By matching By matching By MS/MS 1 1 3947700 0 0 0 0 560300 3387400 4402 123 4450 19756;19757 13140 13140 0 LGAVPATSGPTTFKQQR ________________ PTTFKQQRSTRIVGAK R L G Q R S 2 1 0 0 0 2 0 2 0 0 1 1 0 1 2 1 3 0 0 1 0 17 1 1757.9424 B4DSM5;G3XAG1;Q96ME7 B4DSM5 5 21 ZNF512 Zinc finger protein 512 yes no 3 0.0074263 45.438 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 12370000 1447900 1563100 1427200 0 2907000 5025200 4403 123 4451 19758;19759;19760;19761;19762 13141;13142;13143 13141 3 LGDEDEEIDGDTNKYK IFRKPQQKLGDEDEEI DGDTNKYKKGRKKAAY K L G Y K K 0 0 1 4 0 0 3 2 0 1 1 2 0 0 0 0 1 0 1 0 0 16 1 1839.801 P09884;A6NMQ1 P09884 816 831 POLA1 DNA polymerase alpha catalytic subunit;DNA polymerase yes no 3 0.0099045 45.54 By matching By MS/MS By matching By matching By matching By matching 1 1 1 3709500 0 885300 1115200 0 0 1709000 4404 30 4452 19763;19764;19765 13144;13145 13144 2 LGDPQNRIATK LLVQVVNKLGDPQNRI PQNRIATKASHLLETL K L G T K A 1 1 1 1 0 1 0 1 0 1 1 1 0 0 1 0 1 0 0 0 0 11 1 1211.6622 Q03701;F5H3Y6 Q03701 391 401 CEBPZ CCAAT/enhancer-binding protein zeta yes no 2;3 2.3943E-07 108.35 By matching By matching By matching By matching By matching By MS/MS 1 1 2 2 7049100 0 0 1080800 522190 1908900 3537300 4405 1037 4453 19766;19767;19768;19769;19770;19771 13146;13147 13147 2 LGEASDSELADADK TSLLRRARLGEASDSE SELADADKASVASEVS R L G D K A 3 0 0 3 0 0 2 1 0 0 2 1 0 0 0 2 0 0 0 0 0 14 0 1419.6365 Q5SW79-2;Q5SW79-3;H0Y2V6;Q5SW79;F8W8A3 Q5SW79-2 1010 1023 CEP170 Centrosomal protein of 170 kDa yes no 2 0.00026007 88.561 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 4471500 0 1028800 801820 852430 1788500 0 4406 604 4454 19772;19773;19774;19775 13148;13149 13148 2 LGEENKGHQMLVK APPIPDSRLGEENKGH KGHQMLVKMGWSGSGG R L G V K M 0 0 1 0 0 1 2 2 1 0 2 2 1 0 0 0 0 0 0 1 0 13 1 1481.766 Q8IWX8 Q8IWX8 839 851 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 3 0.0022755 69.216 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 7367600 0 0 0 0 1009900 6357600 4407 1281 4455 19776;19777 13150;13151;13152 13152 3 LGEGTYATVYKGR ETYIKLEKLGEGTYAT YATVYKGRSKLTENLV K L G G R S 1 1 0 0 0 0 1 3 0 0 1 1 0 0 0 0 2 0 2 1 0 13 1 1413.7252 F5H6Z0;Q00537-2;Q00537 F5H6Z0 145 157 CDK17 Cyclin-dependent kinase 17 yes no 3 0.0059126 60.157 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 5600300 413400 859780 1049300 486380 875420 1916100 4408 525 4456 19778;19779;19780;19781;19782;19783 13153 13153 1 LGEHNIDVLEGNEQFINAAK YKSRIQVRLGEHNIDV EQFINAAKIITHPNFN R L G A K I 2 0 3 1 0 1 3 2 1 2 2 1 0 1 0 0 0 0 0 1 0 20 0 2210.0968 CON__P00761 CON__P00761 58 77 yes yes 2;3 0 293.63 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 2 1 13434000000 32547000 5492300000 224960000 6886100000 793610000 4565000 + 4409 284 4457 19784;19785;19786;19787;19788;19789;19790;19791;19792;19793;19794 13154;13155;13156;13157;13158;13159;13160;13161;13162;13163;13164;13165 13156 12 LGEHNIEVLEGNEQFINAAK YKSRIQVRLGEHNIEV EQFINAAKIIRHPQYD R L G A K I 2 0 3 0 0 1 4 2 1 2 2 1 0 1 0 0 0 0 0 1 0 20 0 2224.1124 H0Y8D1;Q8NHM4;P07478;P07477;CON__P07477;E7EQ64 H0Y8D1 23 42 PRSS1;TRY6;PRSS2 Putative trypsin-6;Trypsin-2;Trypsin-1;Alpha-trypsin chain 1;Alpha-trypsin chain 2 yes no 3 0 214.34 By matching By MS/MS By matching By matching By matching By matching 1 112330000 0 112330000 0 0 0 0 + 4410 296 4458 19795 13166 13166 0 LGELPEINGK IRMLDNRKLGELPEIN ELPEINGKLVKSIFRV K L G G K L 0 0 1 0 0 0 2 2 0 1 2 1 0 0 1 0 0 0 0 0 0 10 0 1068.5815 Q12800-3;Q12800;F8VWL0;F8VX55;Q12800-2;Q12800-4 Q12800-3 105 114 TFCP2 Alpha-globin transcription factor CP2 yes no 2 2.2826E-09 117.52 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4867400 0 773930 0 742240 0 3351200 4411 1060 4459 19796;19797;19798 13167 13167 1 LGELPEINGKLVK IRMLDNRKLGELPEIN EINGKLVKSIFRVVFH K L G V K S 0 0 1 0 0 0 2 2 0 1 3 2 0 0 1 0 0 0 0 1 0 13 1 1408.829 Q12800-3;Q12800;F8VWL0;F8VX55;Q12800-2;Q12800-4 Q12800-3 105 117 TFCP2 Alpha-globin transcription factor CP2 yes no 3 2.5906E-91 147.58 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 61712000 0 36933000 17433000 0 7345800 0 4412 1060 4460 19799;19800;19801 13168;13169;13170 13170 3 LGEQYSCYGDGGK PELFDHRKLGEQYSCY SCYGDGGKQELDPQRL K L G G K Q 0 0 0 1 1 1 1 4 0 0 1 1 0 0 0 1 0 0 2 0 0 13 0 1432.5929 Q5T5X7 Q5T5X7 428 440 BEND3 BEN domain-containing protein 3 yes yes 2 0.031181 44.246 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2806400 0 757550 0 0 732380 1316500 4413 1192 4461 19802;19803;19804 13171 13171 1 LGESLQSAER LLRTELQKLGESLQSA ESLQSAERACCHSTGA K L G E R A 1 1 0 0 0 1 2 1 0 0 2 0 0 0 0 2 0 0 0 0 0 10 0 1088.5462 O95235;B4DL79 O95235 751 760 KIF20A Kinesin-like protein KIF20A yes no 2 0.0086058 81.017 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 10531000 0 1656300 1217000 867330 2914200 3876200 4414 767 4462 19805;19806;19807;19808;19809 13172 13172 1 LGESQTLQQFSR QMIEKRSKLGESQTLQ QTLQQFSRDVDEIEAW K L G S R D 0 1 0 0 0 3 1 1 0 0 2 0 0 1 0 2 1 0 0 0 0 12 0 1392.6997 Q13813-3;F8W7K3;Q13813;Q13813-2;A6NG51 Q13813-3 1527 1538 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes no 2 0.025608 49.483 By matching By MS/MS By matching By matching By matching By matching 1 1 749760 0 535800 0 0 0 213960 4415 21 4463 19810;19811 13173 13173 1 LGETYKDHENIVIAK QLAPIWDKLGETYKDH HENIVIAKMDSTANEV K L G A K M 1 0 1 1 0 0 2 1 1 2 1 2 0 0 0 0 1 0 1 1 0 15 1 1728.9046 I3L2P8;F5H8J2;H7BZ94;E7EPA8;P07237;H0Y3Z3;B4DUA5 I3L2P8 352 366 P4HB Protein disulfide-isomerase yes no 3;4 2.0304E-08 97.223 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 3 50377000 7096300 7730100 7468300 7127500 5977500 14977000 4416 356 4464 19812;19813;19814;19815;19816;19817;19818;19819;19820;19821;19822;19823;19824 13174;13175;13176;13177;13178;13179;13180;13181 13178 8 LGEYGFQNALIVR QNCDQFEKLGEYGFQN FQNALIVRYTRKVPQV K L G V R Y 1 1 1 0 0 1 1 2 0 1 2 0 0 1 0 0 0 0 1 1 0 13 0 1478.7882 CON__P02769 CON__P02769 421 433 yes yes 2 8.2578E-24 113.24 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 18061000 12556000 0 0 5504600 0 0 + 4417 294 4465 19825;19826 13182;13183 13183 2 LGFKSPTSKDDK SNKSRSDKLGFKSPTS SPTSKDDKRTEGNKSK K L G D K R 0 0 0 2 0 0 0 1 0 0 1 3 0 1 1 2 1 0 0 0 0 12 2 1321.6878 Q6KC79-2;Q6KC79;Q6KC79-3 Q6KC79-2 908 919 NIPBL Nipped-B-like protein yes no 3 0.0091873 72.531 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 3892800 837440 876000 1308300 0 871040 0 4418 1222 4466 19827;19828;19829;19830 13184 13184 1 LGGANKEMTHLQK EMEEIRKKLGGANKEM KEMTHLQKEVTAIETK K L G Q K E 1 0 1 0 0 1 1 2 1 0 2 2 1 0 0 0 1 0 0 0 0 13 1 1425.7398 Q14683 Q14683 898 910 SMC1A Structural maintenance of chromosomes protein 1A yes yes 3 0.0022757 73.273 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 3905000 0 713030 779880 648350 652960 1110800 4419 1110 4467 19831;19832;19833;19834;19835 13185;13186 13186 1 LGGLVIEK DYCHLIEKLGGLVIEK LGGLVIEKQCFDPTCT K L G E K Q 0 0 0 0 0 0 1 2 0 1 2 1 0 0 0 0 0 0 0 1 0 8 0 827.51165 Q92547 Q92547 1290 1297 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 2 0.022624 77.732 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6619500 590780 0 997310 0 1134900 3896500 4420 1351 4468 19836;19837;19838;19839 13187 13187 1 LGGPQASLSTK SGTEGLRRLGGPQASL PQASLSTKVTASPLQR R L G T K V 1 0 0 0 0 1 0 2 0 0 2 1 0 0 1 2 1 0 0 0 0 11 0 1057.5768 Q4VXZ8;Q9NUI1;Q9NUI1-3 Q4VXZ8 208 218 DECR2 Peroxisomal 2,4-dienoyl-CoA reductase yes no 2 4.2916E-05 101.35 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 45580000 2360300 6927900 6395500 2292700 8580400 19024000 4421 1172 4469 19840;19841;19842;19843;19844;19845;19846 13188;13189;13190;13191;13192;13193;13194 13189 6 LGGTCVNVGCVPK AAVVESHKLGGTCVNV VNVGCVPKKVMWNTAV K L G P K K 0 0 1 0 2 0 0 3 0 0 1 1 0 0 1 0 1 0 0 3 0 13 0 1359.6639 P00390-5;P00390-4;P00390-2;P00390-3;P00390;H0YC68;H0YBD4 P00390-5 98 110 GSR Glutathione reductase, mitochondrial yes no 2 0.0037272 63.181 By MS/MS By MS/MS By matching By matching By matching By matching 2 1 1 1 1 6465100 1226100 2341200 1097300 1058200 0 742370 4422 780 4470 19847;19848;19849;19850;19851;19852 13195;13196 13195 2 LGGTCVNVGCVPKK AAVVESHKLGGTCVNV NVGCVPKKVMWNTAVH K L G K K V 0 0 1 0 2 0 0 3 0 0 1 2 0 0 1 0 1 0 0 3 0 14 1 1487.7589 P00390-5;P00390-4;P00390-2;P00390-3;P00390;H0YC68;H0YBD4 P00390-5 98 111 GSR Glutathione reductase, mitochondrial yes no 3 0.0025082 56.956 By matching By MS/MS By matching By matching By matching By matching 1 1 1 4201600 0 2113000 1494300 594350 0 0 4423 780 4471 19853;19854;19855 13197 13197 1 LGGVSSTEELDIR GTTVETIKLGGVSSTE STEELDIRTLQTKNRK K L G I R T 0 1 0 1 0 0 2 2 0 1 2 0 0 0 0 2 1 0 0 1 0 13 0 1374.6991 Q5VTR2;C9JMW8;C9JWJ4;C9J0A5;C9JXC9 Q5VTR2 37 49 RNF20 E3 ubiquitin-protein ligase BRE1A yes no 2 0.025869 46.069 By matching By MS/MS By matching By matching By matching By matching 1 362480 0 362480 0 0 0 0 4424 1204 4472 19856 13198 13198 1 LGHELQQAGLKTK ELRAEAERLGHELQQA QQAGLKTKEAEQTCRH R L G T K E 1 0 0 0 0 2 1 2 1 0 3 2 0 0 0 0 1 0 0 0 0 13 1 1421.7991 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9;H0YH75 Q14980-2 1641 1653 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.011524 54.199 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 5823100 0 1468300 697500 494360 888500 2274400 4425 1121 4473 19857;19858;19859;19860;19861 13199;13200 13199 2 LGHPDTLNQGEFKELVRK TFHQYSVKLGHPDTLN EFKELVRKDLQNFLKK K L G R K D 0 1 1 1 0 1 2 2 1 0 3 2 0 1 1 0 1 0 0 1 0 18 2 2080.1065 P06702 P06702 26 43 S100A9 Protein S100-A9 yes yes 4 0.018257 38.546 By matching By matching By MS/MS By matching By matching By matching 1 7018800 0 0 7018800 0 0 0 4426 800 4474 19862 13201 13201 1 LGHSFSLVGNK NGPPPCPRLGHSFSLV SFSLVGNKCYLFGGLA R L G N K C 0 0 1 0 0 0 0 2 1 0 2 1 0 1 0 2 0 0 0 1 0 11 0 1157.6193 A6NEM2;P51610-2;P51610;P51610-3 A6NEM2 138 148 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2 0.0016364 90.913 By matching By matching By matching By matching By matching By MS/MS 1 1 1 7782300 0 893730 0 0 1200400 5688200 4427 18 4475 19863;19864;19865 13202 13202 1 LGIKPESVQPHRPTTNPNTSK LNMDRGERLGIKPESV TTNPNTSKFAQKYGGA R L G S K F 0 1 2 0 0 1 1 1 1 1 1 2 0 0 4 2 3 0 0 1 0 21 2 2300.2237 Q16527;F8VQR7 Q16527 88 108 CSRP2 Cysteine and glycine-rich protein 2 yes no 4;5 1.5558E-05 62.589 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 2 2 2 2 2 216050000 22675000 35895000 62960000 9318600 20345000 64857000 4428 1152 4476 19866;19867;19868;19869;19870;19871;19872;19873;19874;19875;19876;19877 13203;13204;13205;13206;13207;13208 13205 6 LGLAEPDMLRK LIGRLAPRLGLAEPDM AEPDMLRKAEEYLRLS R L G R K A 1 1 0 1 0 0 1 1 0 0 3 1 1 0 1 0 0 0 0 0 0 11 1 1241.6802 Q9Y5N6;H3BTQ7 Q9Y5N6 13 23 ORC6 Origin recognition complex subunit 6 yes no 3 0.0097826 56.548 By matching By MS/MS By matching By matching By matching By matching 1 1 950650 0 502610 0 448050 0 0 4429 1655 4477 19878;19879 13209;13210 13210 2 LGLGEGAEEK LGRAEYGRLGLGEGAE LGEGAEEKSIPTLISR R L G E K S 1 0 0 0 0 0 3 3 0 0 2 1 0 0 0 0 0 0 0 0 0 10 0 1001.5029 C9JW69;P18754;P18754-2 C9JW69 343 352 RCC1 Regulator of chromosome condensation yes no 2 5.0572E-09 115.7 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 10584000 1277900 1235400 1686800 951330 2322500 3110100 4430 271 4478 19880;19881;19882;19883;19884;19885 13211;13212;13213;13214;13215;13216 13214 6 LGLGLDDESNNQQAAATQSPGDSRR NHDHKMEKLGLGLDDE QSPGDSRRLSIQRCIQ K L G R R L 3 2 2 3 0 3 1 3 0 0 3 0 0 0 1 3 1 0 0 0 0 25 1 2599.2222 Q09472 Q09472 1708 1732 EP300 Histone acetyltransferase p300 yes yes 3 0.0037358 37.683 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 4224600 1397700 1104500 0 0 0 1722400 4431 1053 4479 19886;19887;19888 13217;13218 13217 2 LGLHVTPSNVDQVSTPPAAK FFHIQAQKLGLHVTPS VSTPPAAKKSRI____ K L G A K K 2 0 1 1 0 1 0 1 1 0 2 1 0 0 3 2 2 0 0 3 0 20 0 2030.0797 Q9NRL2-2;Q9NRL2 Q9NRL2-2 1501 1520 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 3 8.8609E-07 86.575 By matching By MS/MS By matching By matching By matching By matching 1 14574000 0 14574000 0 0 0 0 4432 1536 4480 19889 13219 13219 1 LGLKPLEVNAIK ETNKLRAKLGLKPLEV PLEVNAIKKEAGTKEE K L G I K K 1 0 1 0 0 0 1 1 0 1 3 2 0 0 1 0 0 0 0 1 0 12 1 1293.802 O43290;E9PQI8 O43290 130 141 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 3 0.014802 55.258 By matching By matching By matching By matching By matching By MS/MS 1 7945300 0 0 0 0 0 7945300 4433 713 4481 19890 13220 13220 1 LGLKPLEVNAIKK ETNKLRAKLGLKPLEV LEVNAIKKEAGTKEEP K L G K K E 1 0 1 0 0 0 1 1 0 1 3 3 0 0 1 0 0 0 0 1 0 13 2 1421.897 O43290;E9PQI8 O43290 130 142 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 3 3.7998E-60 136.27 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 15053000 9542300 0 5510800 0 0 0 4434 713 4482 19891;19892 13221;13222 13221 2 LGLNLPAGR CLREKLDRLGLNLPAG GLNLPAGRRKAANVTL R L G G R R 1 1 1 0 0 0 0 2 0 0 3 0 0 0 1 0 0 0 0 0 0 9 0 909.5396 Q7Z6R9 Q7Z6R9 272 280 TFAP2D Transcription factor AP-2-delta yes yes 2 0.00029178 111.74 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 14134000 11740000 0 0 0 0 2393200 4435 1257 4483 19893;19894 13223;13224;13225 13225 3 LGLPPLTPEQQEALQKAK NGQSTAAKLGLPPLTP QEALQKAKKYAMEQSI K L G A K K 2 0 0 0 0 3 2 1 0 0 4 2 0 0 3 0 1 0 0 0 0 18 1 1960.0993 E9PL19;E9PMU7;E9PN18;E9PQ56;H0YEM1;Q9UHX1-4;Q9UHX1-6;Q9UHX1-3;Q9UHX1-5;Q9UHX1-2;Q9UHX1 E9PL19 91 108 PUF60 Poly(U)-binding-splicing factor PUF60 yes no 3 0.00022834 82.774 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 69276000 0 24096000 23572000 16788000 4820800 0 4436 458 4484 19895;19896;19897;19898 13226;13227;13228 13228 3 LGLSVFTHHRVESGGPGTSAASAR REDKEAAKLGLSVFTH GTSAASARRKPRAEDQ K L G A R R 3 2 0 0 0 0 1 4 2 0 2 0 0 1 1 4 2 0 0 2 0 24 1 2393.22 Q9BU76-4;Q9BU76 Q9BU76-4 143 166 MMTAG2 Multiple myeloma tumor-associated protein 2 yes no 4 0.0029793 49.076 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 44778000 0 0 11250000 8170000 0 25358000 4437 1449 4485 19899;19900;19901 13229;13230 13229 2 LGLVIPSSGSGSGNQSIDRSGPLVK RNLLYYSKLGLVIPSS DRSGPLVKSLLRRSLS K L G V K S 0 1 1 1 0 1 0 5 0 2 3 1 0 0 2 6 0 0 0 2 0 25 1 2424.2973 Q9ULJ3-2;Q9ULJ3 Q9ULJ3-2 313 337 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes no 3 0.0061967 38.592 By matching By MS/MS By matching By matching By matching By matching 1 14391000 0 14391000 0 0 0 0 4438 1607 4486 19902 13231 13231 1 LGMSADPDNEDATDK VSKSLKERLGMSADPD DNEDATDKVNKVGEIH R L G D K V 2 0 1 4 0 0 1 1 0 0 1 1 1 0 1 1 1 0 0 0 0 15 0 1577.6515 B4DLG2;O75152;E9PQ61;E9PBY7 B4DLG2 281 295 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 0.031937 39.531 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 3678700 418260 1235100 0 0 950780 1074600 4439 97 4487 19903;19904;19905;19906 13232 13232 1 LGMSADPDNEDATDKVNK VSKSLKERLGMSADPD DATDKVNKVGEIHVKT R L G N K V 2 0 2 4 0 0 1 1 0 0 1 2 1 0 1 1 1 0 0 1 0 18 1 1918.8578 B4DLG2;O75152;E9PQ61;E9PBY7 B4DLG2 281 298 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 3 0.0007077 80.719 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 29569000 0 4787400 4737200 2969500 8114800 8960000 4440 97 4488 19907;19908;19909;19910;19911 13233;13234;13235;13236;13237;13238 13235 5 LGNFFSPK RNGVYLAKLGNFFSPK LGNFFSPKVVSLKKIY K L G P K V 0 0 1 0 0 0 0 1 0 0 1 1 0 2 1 1 0 0 0 0 0 8 0 908.4756 P46940 P46940 81 88 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 2 0.0064013 107.01 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 2 42999000 0 3555800 12983000 3420200 6336000 16704000 4441 929 4489 19912;19913;19914;19915;19916;19917 13239;13240;13241;13242 13240 4 LGNKSPNGISDYPK GSWNNMLKLGNKSPNG NGISDYPKIRVTVTRD K L G P K I 0 0 2 1 0 0 0 2 0 1 1 2 0 0 2 2 0 0 1 0 0 14 1 1488.7573 B4DQ42;Q9HC62;C9IYB7 B4DQ42 109 122 SENP2 Sentrin-specific protease 2 yes no 3 0.022386 44.436 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 5187300 0 207400 1385900 0 691690 2902400 4442 115 4490 19918;19919;19920;19921 13243 13243 1 LGNNCVFAPADVTSEK GGEAQAKKLGNNCVFA PADVTSEKDVQTALAL K L G E K D 2 0 2 1 1 0 1 1 0 0 1 1 0 1 1 1 1 0 0 2 0 16 0 1720.809 Q5H928;Q99714-2;Q99714 Q5H928 54 69 HSD17B10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 2 9.8339E-12 99.238 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 42893000 6349900 4131600 4842400 3400800 3717800 20451000 4443 1181 4491 19922;19923;19924;19925;19926;19927 13244;13245;13246;13247;13248;13249;13250 13247 6 LGNSCEFR TLLECMHKLGNSCEFR LGNSCEFRLLSKEGPA K L G F R L 0 1 1 0 1 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 0 8 0 981.43381 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 626 633 ADAR Double-stranded RNA-specific adenosine deaminase no no 2 4.336E-05 116.37 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 82461000 0 17329000 19806000 4041000 15989000 25296000 4444 352;968 4492 19928;19929;19930;19931;19932 13251;13252;13253;13254 13251 4 LGNSCEFRLLSK TLLECMHKLGNSCEFR CEFRLLSKEGPAHEPK K L G S K E 0 1 1 0 1 0 1 1 0 0 3 1 0 1 0 2 0 0 0 0 0 12 1 1422.7289 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 626 637 ADAR Double-stranded RNA-specific adenosine deaminase no no 2;3 0 234.87 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 477110000 156190000 37905000 158830000 30016000 33470000 60699000 4445 352;968 4493 19933;19934;19935;19936;19937;19938;19939;19940;19941;19942;19943;19944 13255;13256;13257;13258;13259;13260;13261;13262;13263;13264;13265;13266 13266 12 LGNTTVICGVK ADGSALVKLGNTTVIC TTVICGVKAFRSGPPG K L G V K A 0 0 1 0 1 0 0 2 0 1 1 1 0 0 0 0 2 0 0 2 0 11 0 1160.6223 Q5JXM0;Q96B26 Q5JXM0 53 63 DKFZp564C0482;EXOSC8 Exosome complex component RRP43 yes no 2 2.3842E-05 103.91 By matching By matching By matching By matching By matching By MS/MS 1 3131800 0 0 0 0 0 3131800 4446 1184 4494 19945 13267;13268 13267 2 LGPPPSHASADATR VTPRSTARLGPPPSHA HASADATRCLPCPDSQ R L G T R C 3 1 0 1 0 0 0 1 1 0 1 0 0 0 3 2 1 0 0 0 0 14 0 1375.6844 Q2TAK8;Q2TAK8-2 Q2TAK8 345 358 MUM1 PWWP domain-containing protein MUM1 yes no 3 0.0015483 66.784 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 7455700 986160 2678700 1447600 685700 1657400 0 4447 1161 4495 19946;19947;19948;19949;19950 13269;13270 13270 2 LGPSTGSTAETQCRNWLK RRPSVFERLGPSTGST TQCRNWLKTGNCLYGN R L G L K T 1 1 1 0 1 1 1 2 0 0 2 1 0 0 1 2 3 1 0 0 0 18 1 2004.9687 Q5T200-2;Q5T200;Q5T9K0 Q5T200-2 30 47 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 3 0.021774 38.261 By matching By matching By matching By matching By matching By MS/MS 1 1 3459000 717320 0 0 0 0 2741600 4448 1188 4496 19951;19952 13271 13271 1 LGQSIESSYSSIQK LTVKGLKKLGQSIESS SSYSSIQKLVISHLQS K L G Q K L 0 0 0 0 0 2 1 1 0 2 1 1 0 0 0 5 0 0 1 0 0 14 0 1525.7624 Q9UJX5-2;Q9UJX5;E9PCR4 Q9UJX5-2 333 346 ANAPC4 Anaphase-promoting complex subunit 4 yes no 2 0.027264 51.004 By matching By matching By matching By matching By matching By MS/MS 1 1 2391700 0 0 0 0 1175100 1216600 4449 416 4497 19953;19954 13272 13272 0 LGRQGNLSSSGNQEGSQK RHGSNSRRLGRQGNLS GNQEGSQKRYHRSSCG R L G Q K R 0 1 2 0 0 3 1 4 0 0 2 1 0 0 0 4 0 0 0 0 0 18 1 1845.8929 Q5D862;CON__Q5D862 Q5D862 162 179 FLG2 Filaggrin-2 yes no 3 0.0036526 49.395 By matching By matching By MS/MS By matching By matching By matching 1 1 1 621290 0 0 297120 172560 0 151620 + 4450 306 4498 19955;19956;19957 13273 13273 1 LGRTPAEVVSTCDITFACVSDPKAAK LFIQEGARLGRTPAEV VSDPKAAKDLVLGPSG R L G A K D 4 1 0 2 2 0 1 1 0 1 1 2 0 1 2 2 3 0 0 3 0 26 2 2792.3837 Q49A26-2;Q49A26;Q49A26-3;Q49A26-4;Q49A26-5 Q49A26-2 296 321 GLYR1 Putative oxidoreductase GLYR1 no no 4 1.021E-16 82.627 By matching By matching By matching By matching By MS/MS By matching 1 7255700 0 0 0 0 7255700 0 4451 1168;1169 4499 19958 13274 13274 1 LGRYPPWPGKIVNPPK LGDLVWGKLGRYPPWP GKIVNPPKDLKKPRGK K L G P K D 0 1 1 0 0 0 0 2 0 1 1 2 0 0 5 0 0 1 1 1 0 16 2 1818.0305 Q49A26-2;Q49A26;Q49A26-3;Q49A26-5 Q49A26-2 16 31 GLYR1 Putative oxidoreductase GLYR1 no no 4 6.7661E-07 90.759 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 18490000 4852900 0 0 0 0 13637000 4452 1168;1169 4500 19959;19960 13275;13276 13275 2 LGSASQAGPPGSSRK TLRATIEKLGSASQAG GPPGSSRKCSPGSPTD K L G R K C 2 1 0 0 0 1 0 3 0 0 1 1 0 0 2 4 0 0 0 0 0 15 1 1398.7215 Q9P0K8-2;Q9P0K8 Q9P0K8-2 27 41 FOXJ2 Forkhead box protein J2 yes no 3 0.00025146 83.869 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 5471400 516100 1315200 1786800 429050 269370 1154800 4453 1572 4501 19961;19962;19963;19964;19965;19966 13277;13278;13279;13280;13281;13282 13277 6 LGSGSNGLLR EEVSARLRLGSGSNGL SGSNGLLRRKVSIIET R L G L R R 0 1 1 0 0 0 0 3 0 0 3 0 0 0 0 2 0 0 0 0 0 10 0 972.53524 B4DQ42;Q9HC62;E7ENF4;H7C1A0 B4DQ42 321 330 SENP2 Sentrin-specific protease 2 yes no 2 0.0012985 104.22 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 11793000 745470 1213600 1235500 0 3200700 5397700 4454 115 4502 19967;19968;19969;19970;19971 13283;13284;13285;13286 13284 4 LGTPQQIAIAR HLVPLIERLGTPQQIA PQQIAIAREGDLLTKE R L G A R E 2 1 0 0 0 2 0 1 0 2 1 0 0 0 1 0 1 0 0 0 0 11 0 1166.6772 Q7L576;E7EQ04;E7EVJ5;Q96F07-2;E7EVF4;Q7L576-3;Q7L576-2;F5H583;Q96F07;E7EWA4;E7EW33;H7C229;H0YL50 Q7L576 1066 1076 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 2 0.0051126 73.666 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 2 1 7817900 649080 1296900 505050 0 1554600 3812300 4455 359 4503 19972;19973;19974;19975;19976;19977 13287;13288;13289 13289 3 LGVAESWTR VLGQLARRLGVAESWT GVAESWTRDRHCAADL R L G T R D 1 1 0 0 0 0 1 1 0 0 1 0 0 0 0 1 1 1 0 1 0 9 0 1017.5243 Q86Y79;C9J7Z1 Q86Y79 60 68 PTRH1 Probable peptidyl-tRNA hydrolase yes no 2 0.018678 70.552 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5573100 0 0 1165400 0 1178100 3229500 4456 1273 4504 19978;19979;19980 13290 13290 1 LGVDISATK SQEDIADKLGVDISAT GVDISATKAVHISNPK K L G T K A 1 0 0 1 0 0 0 1 0 1 1 1 0 0 0 1 1 0 0 1 0 9 0 902.5073 Q9NSD9;F5H6Y1 Q9NSD9 427 435 FARSB Phenylalanine--tRNA ligase beta subunit yes no 2 0.014363 78.098 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 9332300 961000 2438100 1119700 501810 2002500 2309200 4457 1543 4505 19981;19982;19983;19984;19985;19986 13291 13291 1 LGVLHPDVITK ARGQSVGKLGVLHPDV LHPDVITKFELTMPCS K L G T K F 0 0 0 1 0 0 0 1 1 1 2 1 0 0 1 0 1 0 0 2 0 11 0 1190.7023 Q9NSD9;F5H6Y1 Q9NSD9 561 571 FARSB Phenylalanine--tRNA ligase beta subunit yes no 2 0.0083625 67.214 By matching By matching By matching By matching By matching By MS/MS 1 2318700 0 0 0 0 0 2318700 4458 1543 4506 19987 13292 13292 1 LGVLSSSQNGPPK NLTLRSQKLGVLSSSQ SSQNGPPKSTSQTQSL K L G P K S 0 0 1 0 0 1 0 2 0 0 2 1 0 0 2 3 0 0 0 1 0 13 0 1282.6881 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;C9J6H0;C9JYH7;Q8NDX5-3 E7EX82 182 194 PHC3 Polyhomeotic-like protein 3 yes no 2 0.0018379 85.271 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 4667200 785840 944320 0 0 993790 1943200 4459 398 4507 19988;19989;19990;19991 13293;13294;13295 13294 3 LHDAFFK KIDIDYQKLHDAFFKW KLHDAFFKWQTKPKLT K L H F K W 1 0 0 1 0 0 0 0 1 0 1 1 0 2 0 0 0 0 0 0 0 7 0 876.44939 Q13435;E9PPJ0 Q13435 571 577 SF3B2 Splicing factor 3B subunit 2 yes no 2 0.039183 83.614 By MS/MS By matching By matching By matching By matching By matching 1 1278500 1278500 0 0 0 0 0 4460 1083 4508 19992 13296 13296 1 LHDLYWQAMK AHSTGSSRLHDLYWQA DLYWQAMKTLGVQRPK R L H M K T 1 0 0 1 0 1 0 0 1 0 2 1 1 0 0 0 0 1 1 0 0 10 0 1303.6383 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 1051 1060 MYBBP1A Myb-binding protein 1A yes no 3 0.010525 70.056 By matching By matching By matching By matching By matching By MS/MS 1 4646900 0 0 0 0 0 4646900 4461 682 4509 19993 13297 13297 1 LHDSSGSQVGTGFK FTLGSEMKLHDSSGSQ SQVGTGFKSNFSEKAS K L H F K S 0 0 0 1 0 1 0 3 1 0 1 1 0 1 0 3 1 0 0 1 0 14 0 1418.679 P49792 P49792 1829 1842 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 2;3 2.2373E-05 93.649 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 33974000 5185800 4553000 2533800 1925400 7553100 12223000 4462 945 4510 19994;19995;19996;19997;19998;19999;20000;20001;20002;20003;20004;20005;20006 13298;13299;13300;13301;13302;13303;13304;13305;13306 13305 9 LHDSSGSQVGTGFKSNFSEK FTLGSEMKLHDSSGSQ FKSNFSEKASKFGNTE K L H E K A 0 0 1 1 0 1 1 3 1 0 1 2 0 2 0 5 1 0 0 1 0 20 1 2110.992 P49792 P49792 1829 1848 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 3;4 0.00011156 69.975 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 2 2 2 2 2 1 20542000 4806100 4146400 3622200 2593300 3365000 2008900 4463 945 4511 20007;20008;20009;20010;20011;20012;20013;20014;20015;20016;20017 13307;13308;13309;13310;13311;13312 13308 6 LHGKPIRITLSK MSHLNGHKLHGKPIRI PIRITLSKHQNVQLPR K L H S K H 0 1 0 0 0 0 0 1 1 2 2 2 0 0 1 1 1 0 0 0 0 12 2 1361.8507 P26599;P26599-2;P26599-3;A6NLN1 P26599 399 410 PTBP1 Polypyrimidine tract-binding protein 1 yes no 3 5.6918E-05 100.69 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 88587000 3730000 5220400 16801000 7979700 12050000 42806000 4464 882 4512 20018;20019;20020;20021;20022;20023;20024 13313;13314;13315;13316;13317 13314 5 LHGVNINVEASK IRNLHHYKLHGVNINV NINVEASKNKSKTSTK K L H S K N 1 0 2 0 0 0 1 1 1 1 1 1 0 0 0 1 0 0 0 2 0 12 0 1279.6884 Q9BWF3;E9PB51;Q9BQ04;E7EQS3;Q9BWF3-3;D6R9K7;Q9BWF3-2;E9PLB0;E9PM61 Q9BWF3 60 71 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 3 0.0028879 69.864 By matching By matching By matching By matching By matching By MS/MS 1 1889500 0 0 0 0 0 1889500 4465 1457 4513 20025 13318 13318 1 LHGVNINVEASKNK IRNLHHYKLHGVNINV NVEASKNKSKTSTKLH K L H N K S 1 0 3 0 0 0 1 1 1 1 1 2 0 0 0 1 0 0 0 2 0 14 1 1521.8263 Q9BWF3;E9PB51;Q9BQ04;E7EQS3;Q9BWF3-3;D6R9K7;Q9BWF3-2;E9PLB0;E9PM61 Q9BWF3 60 73 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 3 9.7201E-05 89.747 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 10024000 0 0 0 803840 3046600 6174000 4466 1457 4514 20026;20027;20028 13319;13320 13320 2 LHGVNINVEASKNKSK IRNLHHYKLHGVNINV EASKNKSKTSTKLHVG K L H S K T 1 0 3 0 0 0 1 1 1 1 1 3 0 0 0 2 0 0 0 2 0 16 2 1736.9533 Q9BWF3;E9PB51;Q9BQ04;E7EQS3;Q9BWF3-3;D6R9K7;Q9BWF3-2;E9PLB0;E9PM61 Q9BWF3 60 75 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 3;4 2.9817E-18 104.09 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 3 42164000 7680200 8201100 10787000 4840400 2433600 8221500 4467 1457 4515 20029;20030;20031;20032;20033;20034;20035;20036;20037;20038;20039;20040;20041 13321;13322;13323;13324;13325;13326;13327;13328;13329;13330 13321 9 LHGVPRPLAMK NACGLYMKLHGVPRPL VPRPLAMKKEGIQTRK K L H M K K 1 1 0 0 0 0 0 1 1 0 2 1 1 0 2 0 0 0 0 1 0 11 1 1217.7067 Q92908-2;Q92908 Q92908-2 328 338 GATA6 Transcription factor GATA-6 no no 3 0.012874 61.78 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 9729300 1013800 1100700 2097100 1016100 2006600 2495100 4468 1363 4516 20042;20043;20044;20045;20046;20047 13331;13332 13331 2 LHHQNQQQIQQQQQQLQR QQQQHLIKLHHQNQQQ QQQQQLQRIAQLQLQQ K L H Q R I 0 1 1 0 0 11 0 0 2 1 2 0 0 0 0 0 0 0 0 0 0 18 0 2310.169 Q96RN5-3;Q96RN5-2;Q96RN5;B4DM43;H7C308;F5GZU5;G3V1P5 Q96RN5-3 152 169 MED15 Mediator of RNA polymerase II transcription subunit 15 yes no 3;4 0.00022252 82.529 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 2 4800800 520390 989610 0 0 361120 2929700 4469 1418 4517 20048;20049;20050;20051;20052 13333;13334;13335;13336 13334 4 LHHYSDF KGKALMYRLHHYSDF_ RLHHYSDF________ R L H D F - 0 0 0 1 0 0 0 0 2 0 1 0 0 1 0 1 0 0 1 0 0 7 0 917.40317 Q9Y5J1 Q9Y5J1 550 556 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes yes 2 0.0096195 99.511 By matching By matching By MS/MS By matching By matching By matching 1 1 1416200 0 441580 974580 0 0 0 4470 1654 4518 20053;20054 13337 13337 1 LHIFNAK EENEARGKLHIFNAKK KLHIFNAKKAAAHYKC K L H A K K 1 0 1 0 0 0 0 0 1 1 1 1 0 1 0 0 0 0 0 0 0 7 0 841.48102 B4E0G4;Q8IWS0;E9PC97;Q5JRC6;Q8IWS0-2 B4E0G4 194 200 PHF6 PHD finger protein 6 yes no 2 0.0075268 97.071 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4219300 0 0 1700200 0 834030 1685100 4471 152 4519 20055;20056;20057 13338 13338 1 LHIFSGAHGPEK CNVEPVGRLHIFSGAH SGAHGPEKDFPLHLGK R L H E K D 1 0 0 0 0 0 1 2 2 1 1 1 0 1 1 1 0 0 0 0 0 12 0 1291.6673 Q14676;Q14676-2;E9PGY5;Q14676-3;F8VV34;E7EVA7;Q14676-4;A2AB06;A2AB07;A2AB05;F8WCC2;E7ER07;E7ENQ0;A1Z5I7 Q14676 34 45 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3 0.0028879 69.864 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 7462700 0 1379500 1145500 469430 1700600 2767700 4472 1109 4520 20058;20059;20060;20061;20062 13339;13340;13341;13342 13341 4 LHISHDNIGGPEGK QIYPWMRKLHISHDNI NIGGPEGKRARTAYTR K L H G K R 0 0 1 1 0 0 1 3 2 2 1 1 0 0 1 1 0 0 0 0 0 14 0 1472.7372 P20719 P20719 183 196 HOXA5 Homeobox protein Hox-A5 yes yes 3 0.030705 39.961 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 9233300 0 1777300 2504100 704530 988550 3258800 4473 857 4521 20063;20064;20065;20066;20067 13343 13343 1 LHISPSNMTNQNTNEYLEK EYFGPDFKLHISPSNM NTNEYLEKIKQRLFEN K L H E K I 0 0 4 0 0 1 2 0 1 1 2 1 1 0 1 2 2 0 1 0 0 19 0 2232.0481 Q13547;F5GXM1 Q13547 343 361 HDAC1 Histone deacetylase 1 yes no 3 0.0009843 59.182 By matching By matching By matching By matching By matching By MS/MS 1 7869800 0 0 0 0 0 7869800 4474 1086 4522 20068 13344 13344 1 LHLVDLAGSER KNSSFRSKLHLVDLAG VDLAGSERQKKTKAEG K L H E R Q 1 1 0 1 0 0 1 1 1 0 3 0 0 0 0 1 0 0 0 1 0 11 0 1208.6513 O95239;O95239-2;Q2VIQ3;Q5JRK0;E9PG57;Q05CT3;E2QRG3;H0Y718;Q9Y496;F5H1C2;E9PES4;F6VGH2;Q6ZMV9-3;E7EUN7;Q6ZMV9 O95239 236 246 KIF4A;KIF4B;KIF6;KIF3A Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B;Kinesin-like protein KIF3A;Kinesin-like protein KIF6 yes no 2 0.0041726 78.342 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 3474300 0 1292900 0 0 0 2181400 4475 768 4523 20069;20070 13345;13346 13345 2 LHLVDLAGSERQK KNSSFRSKLHLVDLAG LAGSERQKKTKAEGDR K L H Q K K 1 1 0 1 0 1 1 1 1 0 3 1 0 0 0 1 0 0 0 1 0 13 1 1464.8049 O95239;O95239-2;Q2VIQ3 O95239 236 248 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 3 5.985E-25 118.61 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 25615000 7421900 3002300 6106100 1430200 2342200 5311900 4476 768 4524 20071;20072;20073;20074;20075;20076;20077 13347;13348;13349;13350;13351;13352;13353;13354;13355;13356 13351 10 LHNAIEGGTQLSR KEYVGIVRLHNAIEGG EGGTQLSRALETLTGA R L H S R A 1 1 1 0 0 1 1 2 1 1 2 0 0 0 0 1 1 0 0 0 0 13 0 1394.7266 O60832;O60832-2;H7BZF2;H7C0M1;C9IYT0 O60832 159 171 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes no 3 0.0075253 56.569 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2056800 676360 0 0 0 658540 721900 4477 733 4525 20078;20079;20080 13357;13358 13358 2 LHNELQSGSLR DLTVDAVKLHNELQSG ELQSGSLRLGKSEAPE K L H L R L 0 1 1 0 0 1 1 1 1 0 3 0 0 0 0 2 0 0 0 0 0 11 0 1252.6524 Q5JTH9-2;E9PCK7;Q5JTH9 Q5JTH9-2 58 68 RRP12 RRP12-like protein yes no 3 0.014906 57.225 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2473500 0 0 258190 0 882640 1332700 4478 414 4526 20081;20082;20083 13359 13359 1 LHNELQSGSLRLGK DLTVDAVKLHNELQSG SGSLRLGKSEAPETPM K L H G K S 0 1 1 0 0 1 1 2 1 0 4 1 0 0 0 2 0 0 0 0 0 14 1 1550.8529 Q5JTH9-2;E9PCK7;Q5JTH9 Q5JTH9-2 58 71 RRP12 RRP12-like protein yes no 3 0.0011335 77.372 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 12383000 0 2381200 802680 1319800 2412000 5467200 4479 414 4527 20084;20085;20086;20087;20088 13360 13360 1 LHNVNRPLTMK NACGLYYKLHNVNRPL VNRPLTMKKEGIQTRN K L H M K K 0 1 2 0 0 0 0 0 1 0 2 1 1 0 1 0 1 0 0 1 0 11 1 1321.7289 P23769;P23769-2 P23769 379 389 GATA2 Endothelial transcription factor GATA-2 yes no 3 0.0048197 75.509 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 7590200 0 818900 1056800 582100 1832200 3300200 4480 869 4528 20089;20090;20091;20092;20093 13361;13362;13363 13361 3 LHPDKNPNNPNAHGDFLK AFKKLALKLHPDKNPN NAHGDFLKINRAYEVL K L H L K I 1 0 4 2 0 0 0 1 2 0 2 2 0 1 3 0 0 0 0 0 0 18 1 2026.9973 Q8IXB1;Q8IXB1-2;F8W884;Q3B7W8;E7EP04;Q71S60 Q8IXB1 62 79 DNAJC10 DnaJ homolog subfamily C member 10 yes no 3;4 0.00011814 83.252 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 620940000 41342000 124780000 86693000 67823000 130520000 169790000 4481 1287 4529 20094;20095;20096;20097;20098;20099;20100;20101;20102;20103;20104;20105;20106 13364;13365;13366;13367;13368;13369;13370;13371;13372;13373;13374;13375;13376 13369 13 LHPDKNPNNPNAHGDFLKINR AFKKLALKLHPDKNPN GDFLKINRAYEVLKDE K L H N R A 1 1 5 2 0 0 0 1 2 1 2 2 0 1 3 0 0 0 0 0 0 21 2 2410.2254 Q8IXB1;Q8IXB1-2;F8W884;Q3B7W8;E7EP04;Q71S60 Q8IXB1 62 82 DNAJC10 DnaJ homolog subfamily C member 10 yes no 4;5 0.027804 49.066 By matching By matching By matching By matching By MS/MS By MS/MS 1 2 2 2 18669000 0 0 8057200 4322700 2899600 3389400 4482 1287 4530 20107;20108;20109;20110;20111;20112;20113 13377;13378;13379 13378 3 LHPEMSNLDLTK EKRAKYAKLHPEMSNL MSNLDLTKILSKKYKE K L H T K I 0 0 1 1 0 0 1 0 1 0 3 1 1 0 1 1 1 0 0 0 0 12 0 1396.7021 E9PKP7;P17480-2;P17480;E9PMM2 E9PKP7 133 144 UBTF Nucleolar transcription factor 1 yes no 3 8.6541E-19 117.95 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 27071000 7217200 3308900 3877800 2510100 746850 9409900 4483 455 4531 20114;20115;20116;20117;20118;20119 13380;13381;13382;13383 13380 3 LHQLAMQQSHFPMTHGNTGFSGIESSSPEVK FAGGQLTKLHQLAMQQ ESSSPEVKGYWAGLDA K L H V K G 1 0 1 0 0 3 2 3 3 1 2 1 2 2 2 5 2 0 0 1 0 31 0 3381.587 F8VZX2;Q15366-4;Q15366-5;Q15366-3;Q15366;Q15366-2;H3BRU6;B4DRD7;F8VRG9;F8VWQ4;F8VRH0 F8VZX2 201 231 PCBP2 Poly(rC)-binding protein 2 yes no 4;5 3.2184E-28 76.731 By matching By matching By matching By matching By matching By MS/MS 2 133130000 0 0 0 0 0 133130000 4484 548 4532 20120;20121 13384;13385 13385 2 LHQTIYNQACK QLHERGLKLHQTIYNQ TIYNQACKLLSDDYEQ K L H C K L 1 0 1 0 1 2 0 0 1 1 1 1 0 0 0 0 1 0 1 0 0 11 0 1374.6714 Q96HW7;Q96HW7-2;Q96HW7-3 Q96HW7 229 239 INTS4 Integrator complex subunit 4 yes no 3 6.92E-05 100.69 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 7287600 430600 459410 446990 0 1779600 4171000 4485 1393 4533 20122;20123;20124;20125;20126 13386 13386 1 LHRGAPVNISSSDLTGRQDTSR RERKVSMRLHRGAPVN TGRQDTSRMSTSQNSI R L H S R M 1 3 1 2 0 1 0 2 1 1 2 0 0 0 1 4 2 0 0 1 0 22 2 2366.2051 P48730-2;B4DIJ9;P48730;Q59FJ7;H7BYT1 P48730-2 373 394 CSNK1D Casein kinase I isoform delta yes no 4 0.0097644 39.349 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 8699200 914930 1733700 1901000 0 0 4149500 4486 932 4534 20127;20128;20129;20130 13387 13387 1 LHTGEKPYECK SDLRLHHKLHTGEKPY GEKPYECKECGKAFRV K L H C K E 0 0 0 0 1 0 2 1 1 0 1 2 0 0 1 0 1 0 1 0 0 11 1 1360.6445 B4DM57;Q9Y2G7;H7BYP6;H7BXW0;Q8TAF7-2;Q8N141;F5H4L8;Q9HCL3;H7BYI3;Q8TAF7;P17039;P17039-2 B4DM57 234 244 ZFP30;ZNF461;ZFP82;ZFP14;ZNF30 Zinc finger protein 30 homolog;Zinc finger protein 461;Zinc finger protein 82 homolog;Zinc finger protein 14 homolog;Zinc finger protein 30 yes no 3 0.013248 61.344 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1986500 0 673160 1040600 272670 0 0 4487 102 4535 20131;20132;20133 13388 13388 1 LHTGEKPYQCNECGK SSLTRHCRLHTGEKPY YQCNECGKAFRGQSAL R L H G K A 0 0 1 0 2 1 2 2 1 0 1 2 0 0 1 0 1 0 1 0 0 15 1 1819.7982 Q96IR2 Q96IR2 544 558 ZNF845 Zinc finger protein 845 yes yes 3;4 0.0029678 58.268 By matching By matching By matching By matching By MS/MS By MS/MS 2 2 1 1 2 1 7545100 1624200 955500 579960 467990 2459000 1458400 4488 1396 4536 20134;20135;20136;20137;20138;20139;20140;20141;20142 13389;13390 13389 2 LHVGNISPTCTNK NKSKTSTKLHVGNISP ISPTCTNKELRAKFEE K L H N K E 0 0 2 0 1 0 0 1 1 1 1 1 0 0 1 1 2 0 0 1 0 13 0 1439.7191 Q9BWF3;E9PB51;E7EQS3;Q9BWF3-3;D6R9K7;Q9BWF3-2 Q9BWF3 80 92 RBM4 RNA-binding protein 4 yes no 2;3 0.0013247 87.641 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 2 2 63581000 6341500 9346200 10958000 3977300 6605900 26352000 4489 1457 4537 20143;20144;20145;20146;20147;20148;20149;20150;20151;20152;20153;20154;20155;20156 13391;13392;13393;13394;13395;13396;13397;13398;13399;13400;13401 13395 11 LHVSAVPESLPCR VLEEARLRLHVSAVPE VPESLPCREQEFQDIY R L H C R E 1 1 0 0 1 0 1 0 1 0 2 0 0 0 2 2 0 0 0 2 0 13 0 1463.7555 Q13415 Q13415 495 507 ORC1 Origin recognition complex subunit 1 yes yes 3 0.012713 51.463 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2796000 0 1243900 0 0 0 1552200 4490 1080 4538 20157;20158 13402;13403;13404 13404 3 LIAEQTLQENLIEKGSNLHEK DDVLPKQKLIAEQTLQ KGSNLHEKTLGETSAN K L I E K T 1 0 2 0 0 2 4 1 1 2 4 2 0 0 0 1 1 0 0 0 0 21 1 2406.2755 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1468 1488 RIF1 Telomere-associated protein RIF1 yes no 3;4 3.5829E-05 59.585 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 50443000 0 12457000 36103000 0 1882100 0 4491 1201 4539 20159;20160;20161 13405;13406 13406 2 LIAHAGSLLNLAK VGELVGARLIAHAGSL GSLLNLAKHAASTVQI R L I A K H 3 0 1 0 0 0 0 1 1 1 4 1 0 0 0 1 0 0 0 0 0 13 0 1319.7925 Q9Y2X3 Q9Y2X3 298 310 NOP58 Nucleolar protein 58 yes yes 3 8.5006E-61 136.38 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 17566000 0 5929000 3124500 2919900 5592500 0 4492 1640 4540 20162;20163;20164;20165 13407;13408;13409 13408 3 LIAMKTEK TDPASNTKLIAMKTEK LIAMKTEKEEMSFEPG K L I E K E 1 0 0 0 0 0 1 0 0 1 1 2 1 0 0 0 1 0 0 0 0 8 1 932.53649 E7EWM1;Q15596 E7EWM1 781 788 NCOA2 Nuclear receptor coactivator 2 yes no 2 0.03957 58.604 By MS/MS By matching By matching By matching By matching By matching 1 396080 396080 0 0 0 0 0 4493 394 4541 20166 13410 13410 44 0 LIASVAGSVERVNK GTYMGEEKLIASVAGS GSVERVNKLICVKALK K L I N K L 2 1 1 0 0 0 1 1 0 1 1 1 0 0 0 2 0 0 0 3 0 14 1 1441.8253 A3KFL1;A3KFL4;B4DKK6;A3KFL5;A3KFL2;Q13868 A3KFL1 52 65 EXOSC2 Exosome complex component RRP4 yes no 2;3 0.0011271 77.204 By MS/MS By matching By MS/MS By matching By matching By MS/MS 2 1 2 2 23589000 4004500 2372700 4660100 0 0 12551000 4494 10 4542 20167;20168;20169;20170;20171;20172;20173 13411;13412;13413;13414;13415 13411 5 LIDIVSSQK HFLKIKGKLIDIVSSQ IDIVSSQKIWLPAT__ K L I Q K I 0 0 0 1 0 1 0 0 0 2 1 1 0 0 0 2 0 0 0 1 0 9 0 1001.5757 O14757-2;F5H7S4;O14757;E7EPP6 O14757-2 368 376 CHEK1 Serine/threonine-protein kinase Chk1 yes no 2 0.032422 63.426 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 9492300 554900 0 1351400 667950 873510 6044500 4495 358 4543 20174;20175;20176;20177;20178 13416 13416 1 LIEDSTLSK NSLKEVTKLIEDSTLS IEDSTLSKSVKNAIDT K L I S K S 0 0 0 1 0 0 1 0 0 1 2 1 0 0 0 2 1 0 0 0 0 9 0 1004.539 B7WPF4;Q9UPU5 B7WPF4 301 309 USP24 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 24 yes no 2 0.013144 80.231 By matching By matching By matching By matching By matching By MS/MS 1 1647600 0 0 0 0 0 1647600 4496 180 4544 20179 13417 13417 1 LIEGLSHEVIVSAACGR TKRVEAPRLIEGLSHE IVSAACGRNHTLALTE R L I G R N 2 1 0 0 1 0 2 2 1 2 2 0 0 0 0 2 0 0 0 2 0 17 0 1809.9407 Q9P258 Q9P258 195 211 RCC2 Protein RCC2 yes yes 2;3 3.6974E-155 149.97 By matching By MS/MS By matching By matching By matching By matching 2 93493000 0 93493000 0 0 0 0 4497 1575 4545 20180;20181 13418;13419 13419 2 LIEQYALR ELGEKLKKLIEQYALR LIEQYALREEHIDKVF K L I L R E 1 1 0 0 0 1 1 0 0 1 2 0 0 0 0 0 0 0 1 0 0 8 0 1004.5655 Q9NUQ3;Q9NUQ3-2 Q9NUQ3 279 286 TXLNG Gamma-taxilin yes no 2 0.014193 89.296 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3648800 887210 0 0 484670 0 2276900 4498 1546 4546 20182;20183;20184 13420 13420 1 LIEQYELR ELAERLKKLIEQYELR LIEQYELREEHIDKVF K L I L R E 0 1 0 0 0 1 2 0 0 1 2 0 0 0 0 0 0 0 1 0 0 8 0 1062.571 P40222 P40222 312 319 TXLNA Alpha-taxilin yes yes 2 0.0036054 109.71 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2 2 18460000 1584700 1417100 1460000 996220 4921100 8080500 4499 907 4547 20185;20186;20187;20188;20189;20190;20191;20192 13421;13422;13423;13424;13425 13421 5 LIEVDDER FPATGCQKLIEVDDER LIEVDDERKLRTFYEK K L I E R K 0 1 0 2 0 0 2 0 0 1 1 0 0 0 0 0 0 0 0 1 0 8 0 987.48729 A2A3R7;P62753 A2A3R7 15 22 RPS6 40S ribosomal protein S6 yes no 2 0.022624 77.732 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 21485000 2047400 2930200 2677200 2807600 5276100 5746700 4500 5 4548 20193;20194;20195;20196;20197;20198 13426;13427;13428 13428 3 LIGLMNNEAAQESTR WKVQKEEKLIGLMNNE EAAQESTRRRQKYQES K L I T R R 2 1 2 0 0 1 2 1 0 1 2 0 1 0 0 1 1 0 0 0 0 15 0 1645.8094 Q86Y07-4;Q86Y07-3;Q86Y07 Q86Y07-4 266 280 VRK2 Serine/threonine-protein kinase VRK2 yes no 2 0.0002532 86.548 By matching By matching By matching By matching By matching By MS/MS 1 1 4308400 0 0 0 412940 0 3895400 4501 1271 4549 20199;20200 13429;13430 13430 2 LIHPDEDISLEER TTTSATSKLIHPDEDI EDISLEERRAQLPKYQ K L I E R R 0 1 0 2 0 0 3 0 1 2 2 0 0 0 1 1 0 0 0 0 0 13 0 1564.7733 A8MTG3;O43670-2;O43670;E1P660;H0Y3M2;O43670-3 A8MTG3 332 344 ZNF207 Zinc finger protein 207 yes no 2;3 7.636E-47 128.68 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 104520000 28952000 14132000 23637000 5434200 6472500 25887000 4502 40 4550 20201;20202;20203;20204;20205;20206;20207;20208;20209;20210;20211;20212 13431;13432;13433;13434;13435;13436;13437;13438;13439 13433 9 LIHPDEDISLEERR TTTSATSKLIHPDEDI DISLEERRAQLPKYQR K L I R R A 0 2 0 2 0 0 3 0 1 2 2 0 0 0 1 1 0 0 0 0 0 14 1 1720.8744 A8MTG3;O43670-2;O43670;E1P660;H0Y3M2;O43670-3 A8MTG3 332 345 ZNF207 Zinc finger protein 207 yes no 3;4 0.00060359 74.611 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 115240000 9978000 13420000 12193000 10780000 20837000 48031000 4503 40 4551 20213;20214;20215;20216;20217;20218;20219;20220;20221;20222;20223;20224 13440;13441;13442;13443;13444;13445;13446;13447;13448 13448 9 LIIESPSNTSSTEPA WKELIDPRLIIESPSN NTSSTEPA________ R L I P A - 1 0 1 0 0 0 2 0 0 2 1 0 0 0 2 4 2 0 0 0 0 15 0 1544.757 P38432 P38432 562 576 COIL Coilin yes yes 2 0.029852 39.961 By MS/MS By matching By matching By matching By matching By matching 1 5512900 5512900 0 0 0 0 0 4504 904 4552 20225 13449 13449 1 LIKGIHQSTIDLK PEVELNHKLIKGIHQS HQSTIDLKNELKQCIG K L I L K N 0 0 0 1 0 1 0 1 1 3 2 2 0 0 0 1 1 0 0 0 0 13 1 1464.8664 Q14258 Q14258 333 345 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 3 0.032297 67.879 By matching By matching By matching By matching By matching By MS/MS 1 982120 0 0 0 0 0 982120 4505 1105 4553 20226 13450 13450 0 LIKNNASTDYDLSDK GYLIKDGKLIKNNAST TDYDLSDKSINPLGGF K L I D K S 1 0 2 3 0 0 0 0 0 1 2 2 0 0 0 2 1 0 1 0 0 15 1 1695.8315 P39023;G5E9G0;B5MCW2 P39023 298 312 RPL3 60S ribosomal protein L3 yes no 3 0.0024826 60.968 By MS/MS By matching By matching By matching By matching By matching 1 692630 692630 0 0 0 0 0 4506 905 4554 20227 13451;13452 13452 2 LILCCNSTSK EKYMSTCRLILCCNST LCCNSTSKVIPPIRSR R L I S K V 0 0 1 0 2 0 0 0 0 1 2 1 0 0 0 2 1 0 0 0 0 10 0 1194.5737 C9JU95;P40938 C9JU95 161 170 RFC3 Replication factor C subunit 3 yes no 2 0.01713 66.056 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 19901000 1237100 1712300 1364100 1282300 2666300 11639000 4507 270 4555 20228;20229;20230;20231;20232;20233 13453;13454;13455 13454 3 LINRNTTIPTK TLGGVFTKLINRNTTI RNTTIPTKKSQVFSTA K L I T K K 0 1 2 0 0 0 0 0 0 2 1 1 0 0 1 0 3 0 0 0 0 11 1 1269.7405 B7Z4V2;P38646;F5H3L8 B7Z4V2 443 453 HSPA9 Stress-70 protein, mitochondrial yes no 3 0.018355 57.149 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 7809800 691060 1661200 966690 0 2181800 2309000 4508 187 4556 20234;20235;20236;20237;20238 13456;13457;13458;13459 13458 4 LIPAPRGTGIVSAPVPK RCGSVLVRLIPAPRGT IVSAPVPKKLLMMAGI R L I P K K 2 1 0 0 0 0 0 2 0 2 1 1 0 0 4 1 1 0 0 2 0 17 1 1672.0036 P15880;H0YEN5;E9PQD7;E9PMM9;I3L404;E9PM36 P15880 195 211 RPS2 40S ribosomal protein S2 yes no 3 0.024804 38.948 By MS/MS By matching By matching By matching By matching By matching 1 1 68728000 66453000 0 0 0 2275500 0 4509 839 4557 20239;20240 13460 13460 1 LIQDQQEQIQHLK SKIELNRKLIQDQQEQ QEQIQHLKSTTNELKS K L I L K S 0 0 0 1 0 5 1 0 1 2 2 1 0 0 0 0 0 0 0 0 0 13 0 1619.8631 Q92878-2;Q92878;Q92878-3 Q92878-2 858 870 RAD50 DNA repair protein RAD50 yes no 2;3 1.8813E-46 125.36 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 4 2 110150000 24623000 12586000 18880000 11923000 12734000 29408000 4510 1362 4558 20241;20242;20243;20244;20245;20246;20247;20248;20249;20250;20251;20252;20253;20254;20255 13461;13462;13463;13464;13465;13466;13467;13468;13469;13470;13471;13472;13473;13474 13468 14 LIQIQDNGTGIRK IVKEGGLKLIQIQDNG DNGTGIRKEDLDIVCE K L I R K E 0 1 1 1 0 2 0 2 0 3 1 1 0 0 0 0 1 0 0 0 0 13 1 1454.8205 H0Y818;P40692;F5H745;E9PEB4 H0Y818 50 62 MLH1 DNA mismatch repair protein Mlh1 yes no 3 0.0010284 83.226 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 4475100 298440 611870 0 0 1134500 2430300 4511 614 4559 20256;20257;20258;20259 13475;13476 13475 2 LIQQLRQQSAQSQVSTTAENK TGRSLSLKLIQQLRQQ VSTTAENKTTTTARLA K L I N K T 2 1 1 0 0 6 1 0 0 1 2 1 0 0 0 3 2 0 0 1 0 21 1 2357.2299 Q9H0A0;E7ESU4;E9PMN9 Q9H0A0 427 447 NAT10 N-acetyltransferase 10 yes no 3 1.502E-22 96.234 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 5791400 1278700 1455300 0 0 0 3057500 4512 1477 4560 20260;20261;20262 13477;13478 13477 2 LIQQQLEK IAMAKSAKLIQQQLEK LIQQQLEKELNTLRVT K L I E K E 0 0 0 0 0 3 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 8 0 998.57605 H7C4H2;Q9Y5M8 H7C4H2 81 88 SRPRB Signal recognition particle receptor subunit beta yes no 2 1.0915E-09 123.98 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 5221200 613160 1186500 0 870530 1094200 1456800 4513 672 4561 20263;20264;20265;20266;20267 13479;13480;13481;13482 13481 3 LIQSHPESAEDLQEK SLGETAERLIQSHPES SAEDLQEKCTELNQAW R L I E K C 1 0 0 1 0 2 3 0 1 1 2 1 0 0 1 2 0 0 0 0 0 15 0 1722.8424 Q13813-3;F8W7K3;Q13813;Q13813-2;A6NG51 Q13813-3 1279 1293 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 yes no 3 0.016756 42.52 By matching By matching By matching By matching By matching By MS/MS 1 1 1594600 0 493930 0 0 0 1100700 4514 21 4562 20268;20269 13483 13483 1 LIRHYVEAVYPVEK QLDPTRLRLIRHYVEA EAVYPVEKMEEVWHYE R L I E K M 1 1 0 0 0 0 2 0 1 1 1 1 0 0 1 0 0 0 2 3 0 14 1 1714.9406 Q5T5X7 Q5T5X7 779 792 BEND3 BEN domain-containing protein 3 yes yes 3 2.6843E-08 100.11 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3525600 0 0 598440 0 904450 2022700 4515 1192 4563 20270;20271;20272 13484 13484 1 LIRHYVQLLYPR QLDPSRIKLIRHYVQL YVQLLYPRAKNDRVWT K L I P R A 0 2 0 0 0 1 0 0 1 1 3 0 0 0 1 0 0 0 2 1 0 12 1 1569.9144 Q5T5X7 Q5T5X7 613 624 BEND3 BEN domain-containing protein 3 yes yes 3 0.0031254 82.489 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 4516 1192 4564 20273 13485 13485 1 LISEMHSFIQIKK RKKNQMSKLISEMHSF HSFIQIKKKTNPRNND K L I K K K 0 0 0 0 0 1 1 0 1 3 1 2 1 1 0 2 0 0 0 0 0 13 1 1572.8698 Q16666-3;Q16666-2;Q16666;H3BLV7;E7EPR3 Q16666-3 378 390 IFI16 Gamma-interferon-inducible protein 16 yes no 3 1.232E-09 104.59 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 2 1 28392000 575250 12841000 0 14976000 0 0 4517 1155 4565;4566 20274;20275;20276;20277 13486;13487;13488;13489 13486 145 4 LISETAQRVHTIGQKQK QQLTRAARLISETAQR HTIGQKQKNDQHLRRV R L I Q K N 1 1 0 0 0 3 1 1 1 2 1 2 0 0 0 1 2 0 0 1 0 17 2 1936.0854 Q8N4T4-2;Q8N4T4-4;Q8N4T4 Q8N4T4-2 150 166 ARHGEF39 Rho guanine nucleotide exchange factor 39 yes no 4 0.00411 47.639 By matching By matching By MS/MS By matching By matching By matching 1 1699200 0 0 1699200 0 0 0 4518 1299 4567 20278 13490 13490 1 LISGEEHFSSK CRSQPPARLISGEEHF GEEHFSSKKCLAWFYE R L I S K K 0 0 0 0 0 0 2 1 1 1 1 1 0 1 0 3 0 0 0 0 0 11 0 1232.6037 E9PQV9;Q9BTE7;H0YCN4 E9PQV9 39 49 DCUN1D5 DCN1-like protein 5 yes no 2;3 3.6261E-08 110.84 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 23930000 2649900 5638600 3080900 2701200 3083700 6775900 4519 468 4568 20279;20280;20281;20282;20283;20284;20285;20286;20287;20288;20289;20290 13491;13492;13493;13494;13495;13496;13497 13494 7 LISPLASPADGVK SPPPIEIRLISPLASP ASPADGVKSKPRKTTE R L I V K S 2 0 0 1 0 0 0 1 0 1 2 1 0 0 2 2 0 0 0 1 0 13 0 1266.7184 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 2220 2232 AHCTF1 Protein ELYS yes no 2 0.0013027 76.24 By matching By MS/MS By matching By matching By matching By matching 1 1 3569800 0 2819600 0 750210 0 0 4520 1345 4569 20291;20292 13498 13498 1 LISPQNLSVR VDTRKKTKLISPQNLS SPQNLSVRNNKKLLTS K L I V R N 0 1 1 0 0 1 0 0 0 1 2 0 0 0 1 2 0 0 0 1 0 10 0 1125.6506 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 1328 1337 SETX Probable helicase senataxin yes no 2 0.038739 53.751 By matching By matching By matching By matching By matching By MS/MS 1 543010 0 0 0 0 0 543010 4521 1250 4570 20293 13499 13499 1 LISPQNLSVRNNK VDTRKKTKLISPQNLS NLSVRNNKKLLTSQEL K L I N K K 0 1 3 0 0 1 0 0 0 1 2 1 0 0 1 2 0 0 0 1 0 13 1 1481.8314 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 1328 1340 SETX Probable helicase senataxin yes no 3 0.0021661 71.888 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 7132800 0 2134900 2654400 0 0 2343500 4522 1250 4571 20294;20295;20296 13500;13501 13500 2 LISQIQPEVDRER DFPNELEKLISQIQPE QPEVDRERAVVEVNIP K L I E R A 0 2 0 1 0 2 2 0 0 2 1 0 0 0 1 1 0 0 0 1 0 13 1 1581.8475 Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-4;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9 Q9NRZ9-6 401 413 HELLS Lymphoid-specific helicase yes no 3 0.023493 47.039 By matching By MS/MS By matching By matching By matching By matching 1 1 3468100 0 2892800 575250 0 0 0 4523 1540 4572 20297;20298 13502 13502 1 LISSDGHEFIVK GPDAMYVKLISSDGHE DGHEFIVKREHALTSG K L I V K R 0 0 0 1 0 0 1 1 1 2 1 1 0 1 0 2 0 0 0 1 0 12 0 1343.7085 E5RHG8;E5RJ89;Q15369;E5RGD9 E5RHG8 21 32 TCEB1 Transcription elongation factor B polypeptide 1 yes no 2;3 6.9836E-80 147.62 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 2 2 3 1 2 83869000 15130000 10328000 17125000 5781000 504260 34999000 4524 340 4573 20299;20300;20301;20302;20303;20304;20305;20306;20307;20308;20309;20310;20311 13503;13504;13505;13506;13507;13508;13509;13510;13511;13512 13507 10 LITAADTTAEQR KRSQDLQKLITAADTT ADTTAEQRRTERKAPK K L I Q R R 3 1 0 1 0 1 1 0 0 1 1 0 0 0 0 0 3 0 0 0 0 12 0 1288.6623 Q5TG40;Q9NPF5 Q5TG40 271 282 DMAP1 DNA methyltransferase 1-associated protein 1 yes no 2 0.004647 66.989 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 5736600 659390 747510 563810 487910 755060 2523000 4525 1198 4574 20312;20313;20314;20315;20316;20317 13513;13514;13515;13516;13517 13516 4 LITAADTTAEQRR KRSQDLQKLITAADTT DTTAEQRRTERKAPKK K L I R R T 3 2 0 1 0 1 1 0 0 1 1 0 0 0 0 0 3 0 0 0 0 13 1 1444.7634 Q5TG40;Q9NPF5 Q5TG40 271 283 DMAP1 DNA methyltransferase 1-associated protein 1 yes no 3 0.030285 38.238 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 4402700 0 366350 622460 0 901370 2512500 4526 1198 4575 20318;20319;20320;20321 13518;13519 13519 2 LITEDVQGK EVAFRKFKLITEDVQG ITEDVQGKNCLTNFHG K L I G K N 0 0 0 1 0 1 1 1 0 1 1 1 0 0 0 0 1 0 0 1 0 9 0 1001.5393 D6RAT0;P61247;D6RG13;D6RB09;F5H4F9;E9PFI5;D6RED7;D6RAS7;H0Y8L7;D6RGE0 D6RAT0 49 57 RPS3A 40S ribosomal protein S3a yes no 2 0.0092976 86.136 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 28125000 1882200 1983600 1789200 4089700 14453000 3927400 4527 321 4576 20322;20323;20324;20325;20326;20327 13520;13521;13522;13523;13524;13525 13520 6 LITLSVQDAPTK PILPANQKLITLSVQD SVQDAPTKKEFVINPN K L I T K K 1 0 0 1 0 1 0 0 0 1 2 1 0 0 1 1 2 0 0 1 0 12 0 1284.7289 Q8WYQ5-3;Q8WYQ5 Q8WYQ5-3 489 500 DGCR8 Microprocessor complex subunit DGCR8 yes no 2 9.7671E-27 122.39 By matching By MS/MS By matching By matching By matching By matching 1 1 29963000 0 28389000 0 1574300 0 0 4528 1346 4577 20328;20329 13526 13526 1 LITSDKVENFHEEHEK ASISSCNKLITSDKVE NFHEEHEKNSHHIHKN K L I E K N 0 0 1 1 0 0 4 0 2 1 1 2 0 1 0 1 1 0 0 1 0 16 1 1953.9432 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 163 178 WAPAL Wings apart-like protein homolog yes no 4 0.013107 43.914 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 10799000 824070 1197600 2699800 1431800 1834900 2811200 4529 1253 4578 20330;20331;20332;20333;20334;20335 13527;13528 13528 2 LITSEEERSPAK GVLSGKRKLITSEEER EEERSPAKRGRKSATV K L I A K R 1 1 0 0 0 0 3 0 0 1 1 1 0 0 1 2 1 0 0 0 0 12 1 1358.7042 Q12888;Q12888-2;A6NNK5;F8VY86;H7BZY0 Q12888 1670 1681 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.022061 51.252 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 3116400 0 0 598500 969680 934100 614120 4530 1063 4579 20336;20337;20338;20339 13529 13529 1 LIVDPALDPALRRPSQK SFQWRNYKLIVDPALD ALRRPSQKVYRYDGVH K L I Q K V 2 2 0 2 0 1 0 0 0 1 3 1 0 0 3 1 0 0 0 1 0 17 2 1888.0894 O15047;C9J2Z9 O15047 22 38 SETD1A Histone-lysine N-methyltransferase SETD1A yes no 4 0.0021549 61.409 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 45927000 8811600 37115000 0 0 0 0 4531 703 4580 20340;20341 13530;13531 13530 2 LIVNVNDLR LISDNQYRLIVNVNDL IVNVNDLRRKNEKRAN R L I L R R 0 1 2 1 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 2 0 9 0 1054.6135 P25205 P25205 47 55 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.00032084 111.61 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 56947000 0 14551000 0 0 0 42396000 4532 873 4581 20342;20343 13532;13533 13533 2 LIVTQTMK ________________ LIVTQTMKGLDIQKVA - L I M K G 0 0 0 0 0 1 0 0 0 1 1 1 1 0 0 0 2 0 0 1 0 8 0 932.53649 CON__P02754 CON__P02754 1 8 yes yes 2 6.107E-09 119.41 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 1 1 1 1 1 101740000 12741000 11756000 9080100 10753000 17229000 40182000 + 4533 292 4582 20344;20345;20346;20347;20348;20349;20350 13534;13535;13536;13537;13538 13534 5 LIVTQTMKGLDIQK ________________ MKGLDIQKVAGTWYSL - L I Q K V 0 0 0 1 0 2 0 1 0 2 2 2 1 0 0 0 2 0 0 1 0 14 1 1586.9066 CON__P02754 CON__P02754 1 14 yes yes 2;3 2.5785E-125 154.72 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 123680000 0 0 0 11677000 5474900 106530000 + 4534 292 4583 20351;20352;20353;20354 13539;13540;13541;13542 13539 4 LKALDESHNQNLK LVEHETQKLKALDESH ESHNQNLKEWRDKLRP K L K L K E 1 0 2 1 0 1 1 0 1 0 3 2 0 0 0 1 0 0 0 0 0 13 1 1508.7947 O94804;H0YB71 O94804 899 911 STK10 Serine/threonine-protein kinase 10 yes no 3 0.023966 46.88 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 6747400 545230 845140 941020 0 1172400 3243700 4535 756 4584 20355;20356;20357;20358;20359 13543 13543 1 LKECCDKPLLEK NQDTISSKLKECCDKP CDKPLLEKSHCIAEVE K L K E K S 0 0 0 1 2 0 2 0 0 0 3 3 0 0 1 0 0 0 0 0 0 12 2 1531.7738 CON__P02769 CON__P02769 298 309 yes yes 3 1.6815E-97 153.81 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 2 2 1 1 219420000 31196000 65628000 21661000 31163000 66996000 2770800 + 4536 294 4585 20360;20361;20362;20363;20364;20365;20366;20367;20368;20369 13544;13545;13546;13547;13548;13549;13550;13551 13546 8 LKEFCCDSALPQSR NVSKSLEKLKEFCCDS DSALPQSRVQTESLQE K L K S R V 1 1 0 1 2 1 1 0 0 0 2 1 0 1 1 2 0 0 0 0 0 14 1 1709.7865 F5GXK1;P20585 F5GXK1 128 141 MSH3 DNA mismatch repair protein Msh3 yes no 3 0.011501 50.04 By matching By matching By matching By matching By matching By MS/MS 1 1 9608900 0 0 0 0 2146100 7462800 4537 490 4586 20370;20371 13552 13552 1 LKESFLVTGSQDCTVK VGTVCCSRLKESFLVT GSQDCTVKLWPLPKAL R L K V K L 0 0 0 1 1 1 1 1 0 0 2 2 0 1 0 2 2 0 0 2 0 16 1 1810.9135 Q12788 Q12788 432 447 TBL3 Transducin beta-like protein 3 yes yes 3 0.0024403 67.646 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 8258500 0 4719200 0 0 0 3539300 4538 1058 4587 20372;20373 13553;13554 13554 2 LKESGHGNSVCPVTSNYHSSQR KYRKLLERLKESGHGN SNYHSSQRSQMDTLKT R L K Q R S 0 1 2 0 1 1 1 2 2 0 1 1 0 0 1 5 1 0 1 2 0 22 1 2443.1299 B4DQ42;Q9HC62 B4DQ42 213 234 SENP2 Sentrin-specific protease 2 yes no 4;5 7.802E-07 80.142 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 2 1 11432000 1120100 1368400 1403900 871720 2673700 3993900 4539 115 4588 20374;20375;20376;20377;20378;20379;20380 13555;13556;13557;13558 13558 4 LKESHWEENRNENSGNSWNK PRTRNPEKLKESHWEE NSGNSWNKNFGSGWVS K L K N K N 0 1 5 0 0 0 4 1 1 0 1 2 0 0 0 3 0 2 0 0 0 20 2 2457.1058 Q99590-2;F8VXG7;Q99590 Q99590-2 727 746 SCAF11 Protein SCAF11 yes no 4 0.03103 33.769 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 12188000 0 0 2448900 1524900 2443300 5770600 4540 547 4589 20381;20382;20383;20384 13559 13559 1 LKETGYVVERPSTTK FREEKNYKLKETGYVV VERPSTTKDKHKEEDK K L K T K D 0 1 0 0 0 0 2 1 0 0 1 2 0 0 1 1 3 0 1 2 0 15 2 1706.9203 Q9NYF8-2;Q9NYF8;E9PK09;E9PQN2;E9PKI6;Q9NYF8-3;E9PK91 Q9NYF8-2 459 473 BCLAF1 Bcl-2-associated transcription factor 1 no no 3 0.02238 50.158 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3115900 0 803760 530180 253230 0 1528700 4541 1563;452 4590 20385;20386;20387;20388 13560 13560 1 LKGDDLQAIK RGSSKSGKLKGDDLQA GDDLQAIKKELTQIKQ K L K I K K 1 0 0 2 0 1 0 1 0 1 2 2 0 0 0 0 0 0 0 0 0 10 1 1099.6237 G3V576;G3V4W0;B4DY08;G3V4C1;P07910-2;B2R603;G3V2Q1;P07910;P07910-3;G3V5V7;G8JL89;G3V2D6;O60812 G3V576 188 197 HNRNPC;HNRNPCL1 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 1 yes no 2 0.0082396 90.913 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 20492000 3759500 4219700 2020800 1282400 4022600 5186600 4542 68 4591 20389;20390;20391;20392;20393;20394 13561 13561 1 LKGDDLQAIKK RGSSKSGKLKGDDLQA DDLQAIKKELTQIKQK K L K K K E 1 0 0 2 0 1 0 1 0 1 2 3 0 0 0 0 0 0 0 0 0 11 2 1227.7187 G3V576;G3V4W0;B4DY08;G3V4C1;P07910-2;B2R603;G3V2Q1;P07910;P07910-3;G3V5V7;G8JL89;G3V2D6 G3V576 188 198 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 3 0.0016646 95.483 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 10904000 1317200 2779600 1280300 925540 1929700 2672000 4543 68 4592 20395;20396;20397;20398;20399;20400 13562 13562 1 LKGQDPGAPQLQSESKPPK QEQAFLARLKGQDPGA QSESKPPKKKKKKRRQ R L K P K K 1 0 0 1 0 3 1 2 0 0 2 3 0 0 4 2 0 0 0 0 0 19 2 2004.064 Q5T3I0;Q5T3I0-3;E9PAV9;F8W895 Q5T3I0 185 203 GPATCH4 G patch domain-containing protein 4 yes no 4 0.022085 35.625 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 3045400 311440 0 353710 0 1260400 1119900 4544 1191 4593 20401;20402;20403;20404 13563 13563 1 LKHLVDEPQNLIK CYSTVFDKLKHLVDEP DEPQNLIKQNCDQFEK K L K I K Q 0 0 1 1 0 1 1 0 1 1 3 2 0 0 1 0 0 0 0 1 0 13 1 1545.8879 CON__P02769 CON__P02769 400 412 yes yes 3 0.017214 50.467 By matching By matching By matching By matching By matching By MS/MS 1 1503100 0 0 0 0 0 1503100 + 4545 294 4594 20405 13564 13564 1 LKHLVDEPQNLIKQNCDQFEK CYSTVFDKLKHLVDEP QNCDQFEKLGEYGFQN K L K E K L 0 0 2 2 1 3 2 0 1 1 3 3 0 1 1 0 0 0 0 1 0 21 2 2595.3115 CON__P02769 CON__P02769 400 420 yes yes 3;4 3.4989E-185 152.13 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 2 72079000 0 0 9744200 8731100 0 53604000 + 4546 294 4595 20406;20407;20408;20409 13565;13566;13567;13568 13567 4 LKIPLVK TSRSSKQRLKIPLVKV RLKIPLVKVDMKEEPL R L K V K V 0 0 0 0 0 0 0 0 0 1 2 2 0 0 1 0 0 0 0 1 0 7 1 809.57386 P46013;F5H4V4;P46013-2 P46013 2482 2488 MKI67 Antigen KI-67 no no 2 0.027673 100.74 By matching By matching By MS/MS By matching By matching By matching 1 1 12100000 0 0 9642800 0 2457300 0 4547 919;920 4596 20410;20411 13569 13569 1 LKIPLVKVDMK TSRSSKQRLKIPLVKV PLVKVDMKEEPLAVSK R L K M K E 0 0 0 1 0 0 0 0 0 1 2 3 1 0 1 0 0 0 0 2 0 11 2 1282.8047 P46013;F5H4V4;P46013-2 P46013 2482 2492 MKI67 Antigen KI-67 no no 3 0.0023133 95.618 By MS/MS By matching By matching By matching By matching By matching 1 0 0 0 0 0 0 0 4548 919;920 4597 20412 13570 13570 1 LKKPPTDEELK DDEPLIKKLKKPPTDE PPTDEELKETIKKLLA K L K L K E 0 0 0 1 0 0 2 0 0 0 2 3 0 0 2 0 1 0 0 0 0 11 2 1296.7289 P35659;P35659-2;B4DFG0;H0Y993 P35659 316 326 DEK Protein DEK yes no 3 0.011578 81.017 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 3567100 767170 730190 0 0 1239400 830320 4549 901 4598 20413;20414;20415;20416 13571;13572 13571 2 LKLESSSLKVK ENMKPAAKLKLESSSL ESSSLKVKGEILLEEE K L K V K G 0 0 0 0 0 0 1 0 0 0 3 3 0 0 0 3 0 0 0 1 0 11 2 1230.7547 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1026 1036 RIF1 Telomere-associated protein RIF1 yes no 3 0.014821 75.416 By matching By matching By matching By matching By matching By MS/MS 1 1 1479900 0 688810 0 0 0 791060 4550 1201 4599 20417;20418 13573 13573 1 LKPAPPPPPAASAGK RDKGKLSRLKPAPPPP PPAASAGKAGGKPSQS R L K G K A 4 0 0 0 0 0 0 1 0 0 1 2 0 0 6 1 0 0 0 0 0 15 1 1397.8031 H7C1H8;P00519;P00519-2 H7C1H8 710 724 ABL1 Tyrosine-protein kinase ABL1 yes no 3 0.0061267 51.727 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 7374800 581330 1533500 1407500 0 1840900 2011500 4551 666 4600 20419;20420;20421;20422;20423 13574;13575 13575 2 LKPDPNTLCDEFK DDSPDLPKLKPDPNTL NTLCDEFKADEKKFWG K L K F K A 0 0 1 2 1 0 1 0 0 0 2 2 0 1 2 0 1 0 0 0 0 13 1 1575.7603 CON__P02769 CON__P02769 139 151 yes yes 3 5.6924E-74 138.02 By matching By matching By matching By matching By matching By MS/MS 1 1 1 12045000 0 2023800 0 417140 0 9603700 + 4552 294 4601 20424;20425;20426 13576 13576 1 LKPDPNTLCDEFKADEK DDSPDLPKLKPDPNTL DEFKADEKKFWGKYLY K L K E K K 1 0 1 3 1 0 2 0 0 0 2 3 0 1 2 0 1 0 0 0 0 17 2 2018.9619 CON__P02769 CON__P02769 139 155 yes yes 3;4 2.2151E-13 97.291 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 2 2 2 2 91689000 12898000 6322300 14849000 0 10066000 47554000 + 4553 294 4602 20427;20428;20429;20430;20431;20432;20433;20434;20435 13577;13578;13579;13580;13581;13582;13583;13584;13585 13578 8 LKPESSQQPGQDALAVK AFATAFSKLKPESSQQ GQDALAVKAGHGYDSK K L K V K A 2 0 0 1 0 3 1 1 0 0 2 2 0 0 2 2 0 0 0 1 0 17 1 1794.9476 O96006;C9JXP4 O96006 97 113 ZBED1 Zinc finger BED domain-containing protein 1 yes no 2;3 0.0016072 66.939 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 3 2 52561000 2065400 11066000 5065300 1219000 6151000 26995000 4554 778 4603 20436;20437;20438;20439;20440;20441;20442;20443;20444 13586;13587;13588;13589 13586 3 LKPESSQQPGQDALAVKAGHGYDSK AFATAFSKLKPESSQQ AGHGYDSKKQQELTAA K L K S K K 3 0 0 2 0 3 1 3 1 0 2 3 0 0 2 3 0 0 1 1 0 25 2 2610.3038 O96006;C9JXP4 O96006 97 121 ZBED1 Zinc finger BED domain-containing protein 1 yes no 4 0.028017 30.936 By matching By matching By MS/MS By matching By matching By matching 1 2221000 0 0 2221000 0 0 0 4555 778 4604 20445 13590 13590 1 LKPPVHYNGPSK EARPEPARLKPPVHYN VHYNGPSKAGYVDFEN R L K S K A 0 0 1 0 0 0 0 1 1 0 1 2 0 0 3 1 0 0 1 1 0 12 1 1335.7299 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 432 443 ADAR Double-stranded RNA-specific adenosine deaminase no no 3 1.3075E-07 105.36 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 75371000 5771100 9586400 11233000 5373400 20613000 22795000 4556 352;968 4605 20446;20447;20448;20449;20450;20451 13591;13592;13593;13594;13595;13596 13594 6 LKQSLPPGLAVKELK TDKEKAEKLKQSLPPG GLAVKELK________ K L K L K - 1 0 0 0 0 1 1 1 0 0 4 3 0 0 2 1 0 0 0 1 0 15 2 1619.9974 P63173 P63173 56 70 RPL38 60S ribosomal protein L38 yes yes 3;4 1.6911E-42 123.76 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 2 1 1 2 27907000 9422800 0 14190000 1373700 315740 2605300 4557 1005 4606 20452;20453;20454;20455;20456;20457;20458 13597;13598;13599;13600;13601 13599 5 LKQVYIPNYNKPNPNQISVNNVK KAAEAESKLKQVYIPN QISVNNVKAGVVNGTG K L K V K A 0 0 6 0 0 2 0 0 0 2 1 3 0 0 3 1 0 0 2 3 0 23 2 2683.4446 Q13330;Q13330-3;E7ESY4;E7EN71;H0Y4T7;Q13330-2 Q13330 351 373 MTA1 Metastasis-associated protein MTA1 yes no 4 1.8683E-08 73.383 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 59839000 0 0 19593000 0 0 40246000 4558 1078 4607 20459;20460 13602;13603 13602 2 LKREEPTDTLSK CPKHPYARLKREEPTD EPTDTLSKHQAADNKA R L K S K H 0 1 0 1 0 0 2 0 0 0 2 2 0 0 1 1 2 0 0 0 0 12 2 1415.762 Q7RTV3-2;Q7RTV3 Q7RTV3-2 251 262 ZNF367 Zinc finger protein 367 yes no 3 0.034755 58.04 By matching By matching By matching By matching By MS/MS By matching 1 1 1 2512600 967920 409610 0 0 1135100 0 4559 1247 4608 20461;20462;20463 13604 13604 1 LKTEPEEVSIEDSAQSDLK FFTKLKPRLKTEPEEV DSAQSDLKEVMVLNAT R L K L K E 1 0 0 2 0 1 4 0 0 1 2 2 0 0 1 3 1 0 0 1 0 19 1 2117.0376 Q16666-3;Q16666-2;Q16666;H3BLV7;E7EPR3 Q16666-3 448 466 IFI16 Gamma-interferon-inducible protein 16 yes no 3 0.0017517 52.866 By matching By MS/MS By matching By matching By matching By matching 1 692930 0 692930 0 0 0 0 4560 1155 4609 20464 13605 13605 1 LKVTSMDQTAKDK KSRDFHSKLKVTSMDQ MDQTAKDKALQHMAAM K L K D K A 1 0 0 2 0 1 0 0 0 0 1 3 1 0 0 1 2 0 0 1 0 13 2 1463.7654 A4FUP2 A4FUP2 94 106 TEAD1 yes yes 3 0.0069686 69.314 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 5101200 0 889480 679870 744810 1098300 1688800 4561 12 4610 20465;20466;20467;20468;20469 13606;13607;13608 13608 3 LLAAFEER EENILDARLLAAFEER LLAAFEEREREMELYG R L L E R E 2 1 0 0 0 0 2 0 0 0 2 0 0 1 0 0 0 0 0 0 0 8 0 947.50763 Q9HC52;C9J6K3;C9JM54 Q9HC52 53 60 CBX8 Chromobox protein homolog 8 yes no 2 0.034579 69.812 By matching By MS/MS By matching By matching By matching By matching 1 1668100 0 1668100 0 0 0 0 4562 1519 4611 20470 13609 13609 1 LLAAGFDNSCIK AEISPDSKLLAAGFDN GFDNSCIKLWSLRSKK K L L I K L 2 0 1 1 1 0 0 1 0 1 2 1 0 1 0 1 0 0 0 0 0 12 0 1307.6544 O75529-2;O75529 O75529-2 282 293 TAF5L TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L yes no 2 0.0050704 92.781 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 12022000 0 2000000 0 3031000 0 6991400 4563 744 4612 20471;20472;20473 13610;13611 13610 1 LLADQAEAR KADKARKKLLADQAEA LADQAEARRSKTKEAR K L L A R R 3 1 0 1 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 9 0 985.51926 P84098 P84098 154 162 RPL19 60S ribosomal protein L19 yes yes 2 0.021779 68.847 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1863500 0 0 340910 0 456960 1065700 4564 1016 4613 20474;20475;20476 13612 13612 1 LLAEEEEEEK ASEEYIQRLLAEEEEE AEEEEEEKRQAEKRRR R L L E K R 1 0 0 0 0 0 6 0 0 0 2 1 0 0 0 0 0 0 0 0 0 10 0 1217.5663 Q8IYW5 Q8IYW5 149 158 RNF168 E3 ubiquitin-protein ligase RNF168 yes yes 2 0.016158 66.92 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3526000 0 797440 440820 0 622170 1665600 4565 1292 4614 20477;20478;20479;20480 13613 13613 1 LLAEGHPDPDAELQR ELEEIRQRLLAEGHPD DPDAELQRMEQEAERR R L L Q R M 2 1 0 2 0 1 2 1 1 0 3 0 0 0 2 0 0 0 0 0 0 15 0 1659.8216 P49756 P49756 550 564 RBM25 RNA-binding protein 25 yes yes 3 0.023599 40.278 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 7918000 828450 1291500 784490 425130 1206800 3381600 4566 942 4615 20481;20482;20483;20484;20485;20486 13614 13614 1 LLAQLAQECQEQR QLAEEEPKLLAQLAQE AQECQEQRARLPQEIR K L L Q R A 2 1 0 0 1 4 2 0 0 0 3 0 0 0 0 0 0 0 0 0 0 13 0 1585.7882 G5E960;Q01970 G5E960 1101 1113 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes no 2 0.003397 63.662 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 2926800 0 636700 0 210970 795730 1283500 4567 591 4616 20487;20488;20489;20490 13615;13616;13617 13617 3 LLASANLEEVTMK ELKETIKKLLASANLE NLEEVTMKQICKKVYE K L L M K Q 2 0 1 0 0 0 2 0 0 0 3 1 1 0 0 1 1 0 0 1 0 13 0 1417.7487 P35659;P35659-2;B4DFG0;H0Y993 P35659 332 344 DEK Protein DEK yes no 2 4.8286E-241 180.61 By matching By MS/MS By matching By MS/MS By matching By matching 2 1 81563000 0 67546000 0 14017000 0 0 4568 901 4617;4618 20491;20492;20493 13618;13619;13620 13619 100 3 LLASQGSQGAPLLSTPK ERLLSLDRLLASQGSQ APLLSTPKRERMVLMK R L L P K R 2 0 0 0 0 2 0 2 0 0 4 1 0 0 2 3 1 0 0 0 0 17 0 1666.9254 Q14807;B7Z265;H3BRB3 Q14807 449 465 KIF22 Kinesin-like protein KIF22 yes no 2 0.017398 44.539 By matching By matching By matching By MS/MS By matching By matching 1 2133200 0 0 0 2133200 0 0 4569 1115 4619 20494 13621 13621 0 LLASSPALPSSGAQAR GPPVGEPRLLASSPAL PSSGAQARLTRAPGPP R L L A R L 4 1 0 0 0 1 0 1 0 0 3 0 0 0 2 4 0 0 0 0 0 16 0 1524.826 Q9NYZ3 Q9NYZ3 164 179 GTSE1 G2 and S phase-expressed protein 1 yes yes 2 0.0032019 63.682 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 2 19394000 2931000 2864800 2425700 745080 2736400 7690800 4570 1564 4620 20495;20496;20497;20498;20499;20500;20501 13622;13623;13624;13625 13624 4 LLASTLVHSVKK PASLTKDRLLASTLVH TLVHSVKKEQEFRSIF R L L K K E 1 0 0 0 0 0 0 0 1 0 3 2 0 0 0 2 1 0 0 2 0 12 1 1294.7973 Q9NYF8-2;Q9NYF8;Q9NYF8-4;E9PK09;E9PQN2;E9PKI6;E9PJA7;Q9NYF8-3;E9PK91 Q9NYF8-2 568 579 BCLAF1 Bcl-2-associated transcription factor 1 no no 3 0.008291 54.023 By matching By matching By matching By MS/MS By matching By matching 1 922160 0 0 0 922160 0 0 4571 1563;452 4621 20502 13626 13626 1 LLATASFTK ETNEQEERLLATASFT LATASFTKSSRSSRTR R L L T K S 2 0 0 0 0 0 0 0 0 0 2 1 0 1 0 1 2 0 0 0 0 9 0 950.54368 Q8WYP5;Q8WYP5-3;Q8WYP5-2;H7C4S1 Q8WYP5 2084 2092 AHCTF1 Protein ELYS yes no 2 0.006833 90.15 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 10218000 1546600 2870800 1223200 1172500 290100 3115200 4572 1345 4622 20503;20504;20505;20506;20507;20508 13627;13628 13628 2 LLAVIHELRPTEK GKLQVLSKLLAVIHEL HELRPTEKVVLVSNYT K L L E K V 1 1 0 0 0 0 2 0 1 1 3 1 0 0 1 0 1 0 0 1 0 13 1 1517.893 Q9Y620 Q9Y620 650 662 RAD54B DNA repair and recombination protein RAD54B yes yes 3 0.0043885 62.338 By matching By matching By matching By matching By matching By MS/MS 1 2586100 0 0 0 0 0 2586100 4573 1660 4623 20509 13629;13630 13629 2 LLCGLLAER AQNRSYSKLLCGLLAE LCGLLAERLRISPDRV K L L E R L 1 1 0 0 1 0 1 1 0 0 4 0 0 0 0 0 0 0 0 0 0 9 0 1043.5798 P14174 P14174 79 87 MIF Macrophage migration inhibitory factor yes yes 2 0.010041 101.65 By MS/MS By matching By matching By matching By matching By matching 2 192560000 192560000 0 0 0 0 0 4574 836 4624 20510;20511 13631;13632 13631 2 LLCVIKDTK KRFGQWTKLLCVIKDT LCVIKDTKLLCYKSSK K L L T K L 0 0 0 1 1 0 0 0 0 1 2 2 0 0 0 0 1 0 0 1 0 9 1 1088.6264 Q8N556;E9PDT7 Q8N556 172 180 AFAP1 Actin filament-associated protein 1 yes no 2 0.0042921 106.88 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 13222000 2991000 1251200 1817200 1433900 1911500 3817400 4575 423 4625 20512;20513;20514;20515;20516;20517;20518 13633;13634;13635;13636;13637;13638 13637 6 LLDAESEDRPK QIADLQQKLLDAESED AESEDRPKQRWENIAT K L L P K Q 1 1 0 2 0 0 2 0 0 0 2 1 0 0 1 1 0 0 0 0 0 11 1 1271.6357 O95239;O95239-2;F5H4Q9;Q2VIQ3 O95239 841 851 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 2;3 0.0051626 73.9 By matching By matching By matching By matching By matching By MS/MS 1 2 2 4293800 0 452940 0 0 719090 3121700 4576 768 4626 20519;20520;20521;20522;20523 13639;13640;13641;13642 13639 4 LLDEEISR GIFNHLERLLDEEISR LLDEEISRVRKDMYND R L L S R V 0 1 0 1 0 0 2 0 0 1 2 0 0 0 0 1 0 0 0 0 0 8 0 973.50803 Q96PU8-3;Q96PU8;Q96PU8-5;Q96PU8-9;Q96PU8-8;Q96PU8-6 Q96PU8-3 44 51 QKI Protein quaking yes no 2 1.5726E-15 124.98 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 10514000 682620 1623300 961650 342860 2000700 4902500 4577 1412 4627 20524;20525;20526;20527;20528;20529 13643;13644 13643 2 LLDHTGGCMYISGVPGTGK IYNFVESKLLDHTGGC SGVPGTGKTATVHEVI K L L G K T 0 0 0 1 1 0 0 5 1 1 2 1 1 0 1 1 2 0 1 1 0 19 0 1961.9339 Q13415 Q13415 522 540 ORC1 Origin recognition complex subunit 1 yes yes 3 0.00052442 76.761 By matching By MS/MS By matching By matching By matching By matching 1 14895000 0 14895000 0 0 0 0 4578 1080 4628 20530 13645 13645 1 LLDLVQQSCNYK ADAHLTKKLLDLVQQS VQQSCNYKQLRKGANE K L L Y K Q 0 0 1 1 1 2 0 0 0 0 3 1 0 0 0 1 0 0 1 1 0 12 0 1479.7392 P55769;B1AHD1 P55769 22 33 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 2 0.010253 81.709 By matching By matching By matching By matching By matching By MS/MS 1 5426900 0 0 0 0 0 5426900 4579 969 4629 20531 13646 13646 0 LLDTNPEINQSDSQDSR DRDRAMQRLLDTNPEI QSDSQDSRVAPRLDRK R L L S R V 0 1 2 3 0 2 1 0 0 1 2 0 0 0 1 3 1 0 0 0 0 17 0 1930.8868 Q14CA3;Q14669;Q14CF1 Q14CA3 1613 1629 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 2 0.0041871 48.677 By matching By matching By matching By matching By matching By MS/MS 1 2488200 0 0 0 0 0 2488200 4580 1122 4630 20532 13647 13647 1 LLDTNPEINQSDSQDSRVAPR DRDRAMQRLLDTNPEI QDSRVAPRLDRKKRTV R L L P R L 1 2 2 3 0 2 1 0 0 1 2 0 0 0 2 3 1 0 0 1 0 21 1 2354.1462 Q14CA3;Q14669;Q14CF1 Q14CA3 1613 1633 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 3 0.023797 35.133 By matching By matching By matching By matching By matching By MS/MS 1 1 1638000 0 811940 0 0 0 826040 4581 1122 4631 20533;20534 13648 13648 1 LLDVIHTENK LNHPNIVKLLDVIHTE DVIHTENKLYLVFEFL K L L N K L 0 0 1 1 0 0 1 0 1 1 2 1 0 0 0 0 1 0 0 1 0 10 0 1180.6452 P24941-2;P24941;G3V5T9;E7ESI2 P24941-2 66 75 CDK2 Cyclin-dependent kinase 2 yes no 2 1.274E-95 159.34 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 9552400 0 899130 926000 0 917720 6809600 4582 589 4632 20535;20536;20537;20538 13649 13649 1 LLEAQACTGGIIHPTTGQK VDSITGQRLLEAQACT IHPTTGQKLSLQDAVS R L L Q K L 2 0 0 0 1 2 1 3 1 2 2 1 0 0 1 0 3 0 0 0 0 19 0 1994.0255 P15924;P15924-2 P15924 2650 2668 DSP Desmoplakin yes no 3 0.010552 40.186 By matching By matching By matching By matching By matching By MS/MS 1 1 3324900 0 1290100 0 0 0 2034700 4583 840 4633 20539;20540 13650 13650 1 LLEDKNGEVQNLAVK KVVKMILKLLEDKNGE EVQNLAVKCLGPLVSK K L L V K C 1 0 2 1 0 1 2 1 0 0 3 2 0 0 0 0 0 0 0 2 0 15 1 1668.9046 Q86VP6-2;Q86VP6;F5H6I6;F8WBB8;O75155-2;O75155 Q86VP6-2 56 70 CAND1;CAND2 Cullin-associated NEDD8-dissociated protein 1;Cullin-associated NEDD8-dissociated protein 2 yes no 3 0.018707 43.316 By MS/MS By matching By matching By matching By matching By matching 1 1262500 1262500 0 0 0 0 0 4584 1266 4634 20541 13651 13651 1 LLEDSALSK WELRVEGRLLEDSALS LEDSALSKYDATKQKR R L L S K Y 1 0 0 1 0 0 1 0 0 0 3 1 0 0 0 2 0 0 0 0 0 9 0 974.52843 Q96GM5-2;Q96GM5 Q96GM5-2 215 223 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes no 2 0.028575 65.157 By matching By matching By matching By matching By matching By MS/MS 1 1 4372900 0 0 0 0 1658100 2714800 4585 1388 4635 20542;20543 13652 13652 1 LLEEALSSNR KAREHCLRLLEEALSS EEALSSNRQSTRTADE R L L N R Q 1 1 1 0 0 0 2 0 0 0 3 0 0 0 0 2 0 0 0 0 0 10 0 1130.5932 O94762;B7Z8Y7 O94762 556 565 RECQL5 ATP-dependent DNA helicase Q5 yes no 2 0.011635 70.942 By matching By matching By matching By matching By matching By MS/MS 1 2266000 0 0 0 0 0 2266000 4586 197 4636 20544 13653 13653 1 LLEEEIQAPTSSK LLDPADEKLLEEEIQA IQAPTSSKRSQQHAKV K L L S K R 1 0 0 0 0 1 3 0 0 1 2 1 0 0 1 2 1 0 0 0 0 13 0 1443.7457 F8W9Q2;Q8N7H5-2;Q8N7H5;B4DGJ5 F8W9Q2 97 109 PAF1 RNA polymerase II-associated factor 1 homolog yes no 2 1.6E-05 98.592 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 15351000 4729600 3069500 1258500 655630 2432200 3205100 4587 564 4637 20545;20546;20547;20548;20549;20550;20551 13654;13655;13656;13657 13656 4 LLEEIHAMK KNQRRAQRLLEEIHAM LEEIHAMKELKPDIVT R L L M K E 1 0 0 0 0 0 2 0 1 1 2 1 1 0 0 0 0 0 0 0 0 9 0 1082.5794 Q8NEF9 Q8NEF9 58 66 SRFBP1 Serum response factor-binding protein 1 yes yes 2 0.015798 74.92 By matching By matching By matching By matching By matching By MS/MS 1 794280 0 0 0 0 0 794280 4588 1322 4638 20552 13658 13658 1 LLEGEECR VEIATYRKLLEGEECR LLEGEECRMSGDLSSN K L L C R M 0 1 0 0 1 0 3 1 0 0 2 0 0 0 0 0 0 0 0 0 0 8 0 1004.4597 P35908;CON__P35908;CON__Q6NXH9;Q01546;CON__Q3TTY5;CON__P07744;O95678;CON__Q8BGZ7;CON__O95678;CON__Q01546;P12036-2;F8WC76;P12036;P13647;CON__P13647;E7EU87;CON__Q5XQN5;CON__Q922U2;H0YI76;P02538;CON__P02538;E7EUE8;CON__P50446;P04259;CON__P04259;F5H6G5;Q86Y46;CON__Q32MB2;H0YIC5;B4DQ49;Q8N1N4-2;Q8N1N4;CON__Q8N1N4-2;CON__Q7RTT2;Q7RTS7;CON__Q7RTS7;F8W1S1 P35908 483 490 KRT2;KRT76;KRT75;NEFH;KRT5;KRT6A;KRT6B;KRT73;KRT78;KRT74 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 2 oral;Keratin, type II cytoskeletal 75;Neurofilament heavy polypeptide;Keratin, type II cytoskeletal 5;Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6B;Keratin, type II cytoskeletal 73;Keratin, type II cytoskeletal 78;Keratin, type II cytoskeletal 74 no no 2 0.0012614 111.95 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 13148000 0 3264800 5918600 827620 644120 2493300 + 4589 302;299;287;788;305 4639 20553;20554;20555;20556;20557 13659;13660;13661 13659 3 LLEGEEER MEIHAYRKLLEGEEER LLEGEEERLRLSPSPT K L L E R L 0 1 0 0 0 0 4 1 0 0 2 0 0 0 0 0 0 0 0 0 0 8 0 973.47164 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCJ4;Q5TCI8;Q03252;E9PBF6;P20700 P02545 379 386 LMNA;LMNB2;LMNB1 Prelamin-A/C;Lamin-A/C;Lamin-B2;Lamin-B1 no no 2 0.034579 69.812 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 10585000 1731700 4020700 0 1058500 0 3774300 4590 783;406 4640 20558;20559;20560;20561 13662 13662 1 LLEHLPQEVPYNVQQK CANIIREKLLEHLPQE VPYNVQQKTAVWEEGP K L L Q K T 0 0 1 0 0 3 2 0 1 0 3 1 0 0 2 0 0 0 1 2 0 16 0 1934.0262 O75616 O75616 356 371 ERAL1 GTPase Era, mitochondrial yes yes 3 2.3218E-24 102.63 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 4591 748 4641 20562 13663 13663 1 LLEIQGK GREPMEEKLLEIQGKI KLLEIQGKIEAVEMHL K L L G K I 0 0 0 0 0 1 1 1 0 1 2 1 0 0 0 0 0 0 0 0 0 7 0 799.48035 Q9UKN8 Q9UKN8 669 675 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 2 3.5603E-13 128.38 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 17318000 1326800 1656700 2586000 0 3872100 7876500 4592 1602 4642 20563;20564;20565;20566;20567 13664;13665;13666;13667 13666 4 LLENSTLNSK ADRHKKRKLLENSTLN ENSTLNSKLLKVNGST K L L S K L 0 0 2 0 0 0 1 0 0 0 3 1 0 0 0 2 1 0 0 0 0 10 0 1117.5979 Q6JHV3;H0YMI4;Q9Y6I4;B3KMX7;H0YLB7;H0YKU8;F5H1A6;H0YL81;B4DV65;H0YLG0 Q6JHV3 114 123 USP3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 2 5.1129E-05 108.47 By MS/MS By matching By matching By matching By matching By MS/MS 2 1 1 1 1 1 117580000 22788000 13555000 15816000 12428000 20690000 32307000 4593 628 4643 20568;20569;20570;20571;20572;20573;20574 13668;13669;13670 13668 3 LLEQALK PWTTEEQKLLEQALKT KLLEQALKTYPVNTPE K L L L K T 1 0 0 0 0 1 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 7 0 813.496 Q99543;Q99543-2 Q99543 561 567 DNAJC2 DnaJ homolog subfamily C member 2 yes no 2 0.011177 101.21 By matching By MS/MS By matching By matching By matching By matching 1 1 1485500 0 926140 0 0 559350 0 4594 1426 4644 20575;20576 13671 13671 1 LLEQYKEESK LQKEEAQKLLEQYKEE EQYKEESKKALPPEKK K L L S K K 0 0 0 0 0 1 3 0 0 0 2 2 0 0 0 1 0 0 1 0 0 10 1 1265.6503 Q00839;B3KX72;Q00839-2 Q00839 665 674 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 2;3 1.0521E-115 163.88 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 149260000 20382000 19566000 28324000 13451000 33436000 34097000 4595 1022;1023 4645 20577;20578;20579;20580;20581;20582;20583;20584;20585;20586;20587;20588;20589 13672;13673;13674;13675;13676;13677;13678;13679;13680;13681 13676 10 LLEQYKEESKK LQKEEAQKLLEQYKEE QYKEESKKALPPEKKQ K L L K K A 0 0 0 0 0 1 3 0 0 0 2 3 0 0 0 1 0 0 1 0 0 11 2 1393.7453 Q00839;B3KX72;Q00839-2 Q00839 665 675 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 3 1.5409E-07 110.54 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 13240000 1364600 1868800 2315500 1462500 1913100 4315900 4596 1022;1023 4646 20590;20591;20592;20593;20594;20595 13682;13683;13684;13685;13686 13685 5 LLEYTPTAR EAIALCSRLLEYTPTA LEYTPTARLTPLEACA R L L A R L 1 1 0 0 0 0 1 0 0 0 2 0 0 0 1 0 2 0 1 0 0 9 0 1062.571 P49841;P49841-2;F5H615 P49841 320 328 GSK3B Glycogen synthase kinase-3 beta yes no 2 0.0038339 105.52 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 17049000 2662500 2107300 1648500 687210 2261600 7682300 4597 946 4647 20596;20597;20598;20599;20600;20601;20602 13687;13688;13689;13690;13691;13692 13688 6 LLFSDGEK RSCLEQAKLLFSDGEK LLFSDGEKVIPRLTHE K L L E K V 0 0 0 1 0 0 1 1 0 0 2 1 0 1 0 1 0 0 0 0 0 8 0 907.4651 H7C1J2;H7C1M5;Q9H147;F2Z2A4 H7C1J2 54 61 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 yes no 2 0.015392 85.161 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 23524000 0 0 2053900 2315200 5958500 13197000 4598 667 4648 20603;20604;20605;20606 13693 13693 1 LLFSNTAAQK GGSPPKSKLLFSNTAA FSNTAAQKLRGMDEVY K L L Q K L 2 0 1 0 0 1 0 0 0 0 2 1 0 1 0 1 1 0 0 0 0 10 0 1091.5975 Q96ST3 Q96ST3 866 875 SIN3A Paired amphipathic helix protein Sin3a yes yes 2 4.4732E-15 120.45 By matching By matching By matching By matching By matching By MS/MS 1 1 1 7502700 0 0 0 179520 1850500 5472700 4599 1420 4649 20607;20608;20609 13694;13695 13695 2 LLGEQYYK AVVENVVKLLGEQYYK LLGEQYYKDAMEQCHN K L L Y K D 0 0 0 0 0 1 1 1 0 0 2 1 0 0 0 0 0 0 2 0 0 8 0 1012.5229 Q92785;B4DT58;E9PN04 Q92785 11 18 DPF2 Zinc finger protein ubi-d4 yes no 2 0.008442 93.429 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 18148000 803020 2693000 2649000 1262400 1520400 9220300 4600 1359 4650 20610;20611;20612;20613;20614;20615 13696 13696 1 LLGGFQETCSK FGKEGLWKLLGGFQET GFQETCSKAIRVGVIG K L L S K A 0 0 0 0 1 1 1 2 0 0 2 1 0 1 0 1 1 0 0 0 0 11 0 1238.5965 Q9BVP2-2;Q9BVP2 Q9BVP2-2 231 241 GNL3 Guanine nucleotide-binding protein-like 3 yes no 2 0.0027813 85.813 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 34978000 3568400 3805000 3503500 4987400 9329800 9783600 4601 1455 4651 20616;20617;20618;20619;20620;20621 13697;13698;13699;13700 13699 4 LLGSGYGGLTGGSSRGPPVTPSSEK SRSSSPGKLLGSGYGG PVTPSSEKRSKIPRSQ K L L E K R 0 1 0 0 0 0 1 7 0 0 3 1 0 0 3 5 2 0 1 1 0 25 1 2360.1972 B7ZLX3;H0Y5T1;F5H2E2;F5GWM7;Q7Z460-2;E7EUA5;F5GWS0;Q7Z460-3;F8WA11;Q7Z460;H0YHV8 B7ZLX3 699 723 CLASP1 CLIP-associating protein 1 yes no 3 2.1164E-13 76.21 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 26563000 4137800 2216600 11316000 984220 1481200 6427200 4602 211 4652 20622;20623;20624;20625;20626;20627 13701;13702;13703;13704;13705 13702 5 LLHIYYQNSIDDK KVSWIKDKLLHIYYQN YQNSIDDKLLVEKIFA K L L D K L 0 0 1 2 0 1 0 0 1 2 2 1 0 0 0 1 0 0 2 0 0 13 0 1620.8148 Q29RF7;Q29RF7-3;H0Y9L9 Q29RF7 450 462 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 3 0.00049477 92.781 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 13868000 0 556380 0 0 0 13312000 4603 1159 4653 20628;20629 13706;13707 13706 2 LLIYETEAK VFIVKMWRLLIYETEA LIYETEAKKIGLVK__ R L L A K K 1 0 0 0 0 0 2 0 0 1 2 1 0 0 0 0 1 0 1 0 0 9 0 1078.591 P49756 P49756 829 837 RBM25 RNA-binding protein 25 yes yes 2 0.040243 59.908 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 4376700 0 1054300 715070 675190 793240 1138900 4604 942 4654 20630;20631;20632;20633;20634 13708 13708 1 LLLGPAGGGVPK APLASDRRLLLGPAGG PAGGGVPKLGGLLPEG R L L P K L 1 0 0 0 0 0 0 4 0 0 3 1 0 0 2 0 0 0 0 1 0 12 0 1077.6546 Q96SL8 Q96SL8 293 304 FIZ1 Flt3-interacting zinc finger protein 1 yes yes 2 4.6736E-05 99.973 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 19034000 0 0 6214000 0 2569200 10251000 4605 1419 4655 20635;20636;20637 13709;13710 13709 2 LLLIATGK LEEAEAERLLLIATGK LLLIATGKRTLLIDEL R L L G K R 1 0 0 0 0 0 0 1 0 1 3 1 0 0 0 0 1 0 0 0 0 8 0 827.54804 Q9NQW6;Q9NQW6-2;H7C1K5 Q9NQW6 762 769 ANLN Actin-binding protein anillin yes no 2 0.023129 77.318 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 6294400 0 1336100 0 0 0 4958300 4606 1533 4656 20638;20639 13711;13712;13713 13713 3 LLLLGAGESGK QVYRATHRLLLLGAGE LGAGESGKSTIVKQMR R L L G K S 1 0 0 0 0 0 1 3 0 0 4 1 0 0 0 1 0 0 0 0 0 11 0 1056.6179 P63092-2;A2A2R6;P38405;Q5JWF2-2;P11488;P63096;P19087;P09471-2;P09471;P08754;A8MTJ3;P04899;F5H4U5;P04899-4;P38405-2;P63092;Q5JWD1;A6NI00;Q5JWF2;H0Y7E8;Q5JWE9;P63092-3;H0Y7F4 P63092 43 53 GNAS;GNAL;GNAT1;GNAI1;GNAT2;GNAO1;GNAI3;GNAT3;GNAI2 Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(olf) subunit alpha;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(t) subunit alpha-1;Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(t) subunit alpha-2;Guanine nucleotide-binding protein G(o) subunit alpha;Guanine nucleotide-binding protein G(k) subunit alpha;Guanine nucleotide-binding protein G(t) subunit alpha-3;Guanine nucleotide-binding protein G(i) subunit alpha-2 no no 2 1.2421E-12 113.69 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 79099000 0 19388000 25233000 4152900 6613300 23712000 4607 1000;1001;1002 4657 20640;20641;20642;20643;20644 13714;13715;13716;13717;13718 13718 4 LLLPGELAK REIQTAVRLLLPGELA LLPGELAKHAVSEGTK R L L A K H 1 0 0 0 0 0 1 1 0 0 4 1 0 0 1 0 0 0 0 0 0 9 0 952.59572 Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q5QNW6-2;B4DR52;Q99880;P57053;Q96A08 Q99879 101 109 HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS;HIST1H2BA Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 1-A no no 2 9.3957E-07 116.37 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 79763000 0 72398000 0 7364700 0 0 4608 119 4658 20645;20646 13719;13720 13720 2 LLLQVQHASK VAPIERVKLLLQVQHA LQVQHASKQITADKQY K L L S K Q 1 0 0 0 0 2 0 0 1 0 3 1 0 0 0 1 0 0 0 1 0 10 0 1135.6713 P12236;P12235;P05141 P05141 34 43 SLC25A6;SLC25A4;SLC25A5 ADP/ATP translocase 3;ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 2 8.6523E-116 164.33 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 74237000 15351000 4446800 5916700 7262000 19932000 21329000 4609 795;826 4659 20647;20648;20649;20650;20651;20652;20653 13721;13722;13723;13724;13725;13726;13727 13727 7 LLLSATSGEK VDDKQLRKLLLSATSG LSATSGEKGVRIKECR K L L E K G 1 0 0 0 0 0 1 1 0 0 3 1 0 0 0 2 1 0 0 0 0 10 0 1017.5706 E9PDD9;Q9NW13 E9PDD9 365 374 RBM28 RNA-binding protein 28 yes no 2 0.02 63.624 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 11793000 2067900 2149300 1883200 1452400 3897600 342960 4610 422 4660 20654;20655;20656;20657;20658;20659 13728;13729 13728 2 LLMHGKEVGSIIGK LNVTLTIRLLMHGKEV EVGSIIGKKGESVKRI R L L G K K 0 0 0 0 0 0 1 3 1 2 2 2 1 0 0 1 0 0 0 1 0 14 1 1480.8436 F8VZX2;Q15366-4;Q15366-5;Q15366-3;Q15366;Q15366-2;G3V0E8;B4DXP5;F8W0G4;B4DLC0;F8VRG9;F8W1G6;P57721-2;P57721-3;P57721-5;E9PFP8;P57721-4;P57721;F8VTZ0;H3BSP4;Q15365 Q15365 18 31 PCBP2;PCBP3;PCBP1 Poly(rC)-binding protein 2;Poly(rC)-binding protein 3;Poly(rC)-binding protein 1 no no 3 2.9869E-30 117.93 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 4576300 1591000 0 2047200 0 0 938070 4611 1135;548 4661 20660;20661;20662 13730;13731 13730 2 LLNDEDPVVVTK RALPELTKLLNDEDPV EDPVVVTKAAMIVNQL K L L T K A 0 0 1 2 0 0 1 0 0 0 2 1 0 0 1 0 1 0 0 3 0 12 0 1340.7187 F5GWP8;C9JTX4;C9J826;C9JK18;C9JKY1;P14923 F5GWP8 150 161 JUP Junction plakoglobin yes no 2 0.034746 46.069 By matching By matching By matching By MS/MS By matching By matching 1 975870 0 0 0 975870 0 0 4612 485 4662 20663 13732 13732 1 LLNLHENQIQIIK DGISTNTRLLNLHENQ ENQIQIIKVNSFKHLR R L L I K V 0 0 2 0 0 2 1 0 1 3 3 1 0 0 0 0 0 0 0 0 0 13 0 1574.9144 Q9HCJ2 Q9HCJ2 80 92 LRRC4C Leucine-rich repeat-containing protein 4C yes yes 3 0.0017287 72.152 By MS/MS By MS/MS By matching By MS/MS By matching By matching 2 1 1 1 1 1 404120000 46258000 48198000 84515000 45109000 76111000 103930000 4613 1521 4663 20664;20665;20666;20667;20668;20669;20670 13733;13734;13735 13734 3 LLNLKDSSMADASK PPVKKKPKLLNLKDSS SSMADASKHGGGTESL K L L S K H 2 0 1 2 0 0 0 0 0 0 3 2 1 0 0 3 0 0 0 0 0 14 1 1491.7603 Q96ST3 Q96ST3 444 457 SIN3A Paired amphipathic helix protein Sin3a yes yes 3 0.0011285 73.415 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6179000 964740 790990 1264700 0 0 3158700 4614 1420 4664 20671;20672;20673;20674 13736 13736 1 LLNPSLQK SLDQFDCKLLNPSLQK LLNPSLQKVADKRRKD K L L Q K V 0 0 1 0 0 1 0 0 0 0 3 1 0 0 1 1 0 0 0 0 0 8 0 911.54402 C9J4N8;Q9HAV4;E7EQN7 C9J4N8 761 768 XPO5 Exportin-5 yes no 2 6.107E-09 119.41 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 15904000 1004700 2522800 1453300 990140 2362500 7570200 4615 227 4665 20675;20676;20677;20678;20679;20680 13737;13738;13739;13740 13737 4 LLNTWTNRYPDAK SSQVPLKRLLNTWTNR TNRYPDAKMDPMNIWD R L L A K M 1 1 2 1 0 0 0 0 0 0 2 1 0 0 1 0 2 1 1 0 0 13 1 1590.8154 P78527;E7EUY0;P78527-2 P78527 3160 3172 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 0.0014183 89.356 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 18248000 0 3481200 4337200 0 928290 9501300 4616 1012 4666 20681;20682;20683;20684 13741;13742;13743 13742 3 LLPAELPAK LLEEALLRLLPAELPA LPAELPAKRVRGKARL R L L A K R 2 0 0 0 0 0 1 0 0 0 3 1 0 0 2 0 0 0 0 0 0 9 0 950.58007 P78527;E7EUY0;P78527-2 P78527 2900 2908 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.011764 82.645 By matching By matching By matching By matching By matching By MS/MS 1 1 3559100 0 763140 0 0 0 2796000 4617 1012 4667 20685;20686 13744 13744 1 LLPERQTDVTGEEELTKGK PLERETEKLLPERQTD EEELTKGKQDREQKQL K L L G K Q 0 1 0 1 0 1 4 2 0 0 3 2 0 0 1 0 3 0 0 1 0 19 2 2142.1168 Q14676;Q14676-3;F8VV34;E7EVA7 Q14676 838 856 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3;4 0.0034049 59.182 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 76831000 0 14877000 11621000 21535000 13464000 15334000 4618 1109 4668 20687;20688;20689;20690;20691;20692;20693;20694;20695;20696 13745;13746;13747;13748;13749;13750 13745 6 LLPQVEAAR QLKEALERLLPQVEAA LPQVEAARKAIRAAQV R L L A R K 2 1 0 0 0 1 1 0 0 0 2 0 0 0 1 0 0 0 0 1 0 9 0 995.57638 Q86UT8;E9PJ16;E9PPT8 Q86UT8 37 45 CCDC84 Coiled-coil domain-containing protein 84 yes no 2 0.018028 70.908 By matching By matching By matching By matching By matching By MS/MS 1 1 3508400 0 1269000 0 0 0 2239300 4619 1263 4669 20697;20698 13751 13751 1 LLQAETASNSAR QKLEERLRLLQAETAS ETASNSARAAERSSAL R L L A R A 3 1 1 0 0 1 1 0 0 0 2 0 0 0 0 2 1 0 0 0 0 12 0 1259.647 Q14980-2;Q14980;F5H2L0;H0YFY6 Q14980-2 1271 1282 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 0.00065502 93.766 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 33622000 5079800 6588600 4137300 3280800 172400 14363000 4620 1121 4670 20699;20700;20701;20702;20703;20704;20705 13752;13753;13754;13755;13756 13752 5 LLQAETASNSARAAER QKLEERLRLLQAETAS NSARAAERSSALREEV R L L E R S 5 2 1 0 0 1 2 0 0 0 2 0 0 0 0 2 1 0 0 0 0 16 1 1686.8649 Q14980-2;Q14980;F5H2L0;H0YFY6 Q14980-2 1271 1286 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.016273 41.996 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 5642000 0 1220500 2210600 0 1249700 961270 4621 1121 4671 20706;20707;20708;20709 13757;13758 13757 2 LLQALAQYQNHLQEQPRK EALMKSVKLLQALAQY HLQEQPRKALVDILSE K L L R K A 2 1 1 0 0 5 1 0 1 0 4 1 0 0 1 0 0 0 1 0 0 18 1 2177.1705 I3L1L3;Q9BQG0;Q9BQG0-2;E7EN09 I3L1L3 82 99 MYBBP1A Myb-binding protein 1A yes no 3;4 0.00044047 74.141 By matching By matching By matching By matching By matching By MS/MS 2 34718000 0 0 0 0 0 34718000 4622 682 4672 20710;20711 13759;13760 13760 2 LLQAQGVEVPSKDSLPK ARAEATLKLLQAQGVE PSKDSLPKKRPIYEDK K L L P K K 1 0 0 1 0 2 1 1 0 0 3 2 0 0 2 2 0 0 0 2 0 17 1 1808.0044 O60841 O60841 425 441 EIF5B Eukaryotic translation initiation factor 5B yes yes 3 1.0133E-90 133.96 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 68244000 15329000 10912000 0 0 0 42003000 4623 734 4673 20712;20713;20714 13761;13762;13763 13763 3 LLQLGQQPR VQEQVRARLLQLGQQP LQLGQQPRHNGAAEPE R L L P R H 0 1 0 0 0 3 0 1 0 0 3 0 0 0 1 0 0 0 0 0 0 9 0 1051.6138 Q9Y446 Q9Y446 54 62 PKP3 Plakophilin-3 yes yes 2 0.0096355 101.72 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 18471000 0 4153200 0 0 2661400 11657000 4624 1650 4674 20715;20716;20717 13764;13765;13766;13767 13765 4 LLQLVEDR ANQAINPKLLQLVEDR LLQLVEDRGSGRSRGR K L L D R G 0 1 0 1 0 1 1 0 0 0 3 0 0 0 0 0 0 0 0 1 0 8 0 984.5604 P17844;E7ETL9 P17844 471 478 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 2 0.014776 87.476 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 30051000 0 7696900 0 2908800 0 19445000 4625 853 4675 20718;20719;20720 13768;13769 13769 2 LLQLVEDRGSGR ANQAINPKLLQLVEDR VEDRGSGRSRGRGGMK K L L G R S 0 2 0 1 0 1 1 2 0 0 3 0 0 0 0 1 0 0 0 1 0 12 1 1341.7365 P17844;E7ETL9 P17844 471 482 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 3 0.0041085 66.267 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 154390000 0 21976000 27471000 3388800 10248000 91305000 4626 853 4676 20721;20722;20723;20724;20725 13770;13771;13772 13772 3 LLQQGTAPAQAK QEQEIEQRLLQQGTAP GTAPAQAKAEPTAAPH R L L A K A 3 0 0 0 0 3 0 1 0 0 2 1 0 0 1 0 1 0 0 0 0 12 0 1224.6826 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7;F5H7D9;H7C3H1 Q86YP4 476 487 GATAD2A Transcriptional repressor p66-alpha yes no 2 3.9776E-07 101.71 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 59031000 927400 12095000 13230000 747370 1512200 30518000 4627 170 4677 20726;20727;20728;20729;20730;20731 13773;13774;13775;13776;13777;13778 13774 6 LLQQNTQLK SLEQEKTRLLQQNTQL LQQNTQLKRFIQELSG R L L L K R 0 0 1 0 0 3 0 0 0 0 3 1 0 0 0 0 1 0 0 0 0 9 0 1084.6241 Q01664;I3L254 Q01664 106 114 TFAP4 Transcription factor AP-4 yes no 2 0.0023881 106.42 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 8493400 490600 1469300 0 359950 1425300 4748300 4628 1029 4678 20732;20733;20734;20735;20736 13779;13780;13781 13781 3 LLQQQNDITGLSR ________________ NDITGLSRQVKHVMNF K L L S R Q 0 1 1 1 0 3 0 1 0 1 3 0 0 0 0 1 1 0 0 0 0 13 0 1484.7947 E7EN20;H0Y612;Q9UPN9-2;Q9UPN9 E7EN20 3 15 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes no 2 0.003651 63.292 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3174300 0 381350 389210 0 0 2403800 4629 348 4679 20737;20738;20739 13782 13782 1 LLQSKCPAESVDSSGK SHHECIRKLLQSKCPA ESVDSSGKTALHYAAA K L L G K T 1 0 0 1 1 1 1 1 0 0 2 2 0 0 1 4 0 0 0 1 0 16 1 1704.8352 E9PED3;Q9P0K7-3;E7EMX7;Q9P0K7;Q9P0K7-2;D6REL2;D6R9G6;D6RF74;D6RE17 E9PED3 105 120 RAI14 Ankycorbin yes no 3 0.0014337 69.331 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 8923600 2734100 851000 1125300 1407700 1335100 1470400 4630 347 4680 20740;20741;20742;20743;20744;20745;20746 13783;13784;13785;13786;13787;13788 13785 5 LLQSQLQVK EGWSKNFKLLQSQLQV LQSQLQVKKAALTQAK K L L V K K 0 0 0 0 0 3 0 0 0 0 3 1 0 0 0 1 0 0 0 1 0 9 0 1055.6339 Q96I25;Q5W011;Q5W010 Q96I25 25 33 RBM17 Splicing factor 45 yes no 2 1.2572E-54 145.16 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 22257000 2230200 3047600 4439700 3014100 3188800 6336500 4631 1395 4681 20747;20748;20749;20750;20751;20752 13789;13790;13791;13792;13793;13794 13790 6 LLQVSVDDR DDLNMRWKLLQVSVDD LQVSVDDRLKQLQEAH K L L D R L 0 1 0 2 0 1 0 0 0 0 2 0 0 0 0 1 0 0 0 2 0 9 0 1043.5611 P46939;Q5T097 P46939 2783 2791 UTRN Utrophin yes no 2 0.015798 74.92 By matching By matching By MS/MS By matching By matching By matching 1 1 1 6187800 0 0 2421200 1506700 2260000 0 4632 928 4682 20753;20754;20755 13795 13795 1 LLRHHYEQQQEDLAR VDPDYWEKLLRHHYEQ QQQEDLARNLGKGKRI K L L A R N 1 2 0 1 0 3 2 0 2 0 3 0 0 0 0 0 0 0 1 0 0 15 1 1934.9711 F5H2G1;F5GWX5;Q14839;Q14839-2;Q12873;E9PG89;Q12873-2 F5H2G1 1291 1305 CHD4;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 no no 3;4 0.00022791 86.944 By matching By matching By MS/MS By matching By MS/MS By MS/MS 2 1 3 44470000 0 0 7031800 0 839480 36599000 4633 486;430 4683 20756;20757;20758;20759;20760;20761 13796;13797;13798;13799;13800;13801 13797 6 LLRHHYEQQQEDLARNLGK VDPDYWEKLLRHHYEQ DLARNLGKGKRIRKQV K L L G K G 1 2 1 1 0 3 2 1 2 0 4 1 0 0 0 0 0 0 1 0 0 19 2 2347.2145 F5H2G1;F5GWX5;Q14839;Q14839-2;Q12873;E9PG89;Q12873-2 F5H2G1 1291 1309 CHD4;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 no no 4 0.0019406 51.76 By matching By matching By matching By matching By matching By MS/MS 1 2330900 0 0 0 0 0 2330900 4634 486;430 4684 20762 13802 13802 1 LLRTNLDESDVQPVK FDINCGVRLLRTNLDE ESDVQPVKEQLAQAMF R L L V K E 0 1 1 2 0 1 1 0 0 0 3 1 0 0 1 1 1 0 0 2 0 15 1 1725.9261 Q9Y3I0;E7EQS9 Q9Y3I0 126 140 C22orf28;RTCB tRNA-splicing ligase RtcB homolog yes no 3 0.0046446 53.924 By matching By MS/MS By matching By matching By matching By matching 1 1149800 0 1149800 0 0 0 0 4635 1647 4685 20763 13803 13803 1 LLRYDHQQRLTAK EALDLLDKLLRYDHQQ HQQRLTAKEAMEHPYF K L L A K E 1 2 0 1 0 2 0 0 1 0 3 1 0 0 0 0 1 0 1 0 0 13 2 1640.9111 H3BV19;H3BSA1;P19784 H3BV19 107 119 CSNK2A2 Casein kinase II subunit alpha yes no 4 0.025223 45.28 By matching By matching By matching By matching By MS/MS By matching 1 1 2682800 0 0 0 0 2024200 658560 4636 647 4686 20764;20765 13804 13804 1 LLSAAYITSHLK VSCNICGKLLSAAYIT AYITSHLKTHGQSQSI K L L L K T 2 0 0 0 0 0 0 0 1 1 3 1 0 0 0 2 1 0 1 0 0 12 0 1315.75 Q14119 Q14119 295 306 VEZF1 Vascular endothelial zinc finger 1 yes yes 2;3 1.0477E-117 157.03 By matching By MS/MS By matching By MS/MS By matching By matching 1 2 224970000 0 73257000 0 151710000 0 0 4637 1094 4687 20766;20767;20768 13805;13806;13807 13806 3 LLSAAYITSHLKTHGQSQSINCNTCK VSCNICGKLLSAAYIT SINCNTCKQGISKTCM K L L C K Q 2 0 2 0 2 2 0 1 2 2 3 2 0 0 0 4 3 0 1 0 0 26 1 2931.4331 Q14119 Q14119 295 320 VEZF1 Vascular endothelial zinc finger 1 yes yes 4 0.0012417 50.536 By matching By matching By matching By MS/MS By matching By matching 1 51369000 0 0 0 51369000 0 0 4638 1094 4688 20769 13808 13808 1 LLSAVSSTK DGRLCNSRLLSAVSST LSAVSSTKDDEPDPLI R L L T K D 1 0 0 0 0 0 0 0 0 0 2 1 0 0 0 3 1 0 0 1 0 9 0 904.52295 Q92547 Q92547 1014 1022 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 2 0.036116 61.765 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2091300 473250 595990 0 0 0 1022000 4639 1351 4689 20770;20771;20772 13809 13809 1 LLSISGK DEEEEDVKLLSISGKR KLLSISGKRSAPGGGS K L L G K R 0 0 0 0 0 0 0 1 0 1 2 1 0 0 0 2 0 0 0 0 0 7 0 716.44324 P06748-2;P06748;P06748-3;E5RI98 P06748-2 135 141 NPM1 Nucleophosmin yes no 1 0.023852 57.281 By matching By matching By matching By matching By MS/MS By matching 1 1 1 45492000 9525000 0 12821000 0 23145000 0 4640 801 4690 20773;20774;20775 13810 13810 1 LLSITVR PLISGFYKLLSITVRN KLLSITVRNAKKIKYF K L L V R N 0 1 0 0 0 0 0 0 0 1 2 0 0 0 0 1 1 0 0 1 0 7 0 800.51199 P78527;E7EUY0;P78527-2 P78527 669 675 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.040677 81.784 By matching By matching By matching By matching By matching By MS/MS 1 2047900 0 0 0 0 0 2047900 4641 1012 4691 20776 13811 13811 1 LLSPEDMNK ALLIKRRRLLSPEDMN LSPEDMNKLMFLKSNM R L L N K L 0 0 1 1 0 0 1 0 0 0 2 1 1 0 1 1 0 0 0 0 0 9 0 1045.5114 Q5T7W0-2;Q5T7W0 Q5T7W0-2 844 852 ZNF618 Zinc finger protein 618 yes no 2 0.011126 83.647 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6770400 0 209800 0 482310 2048200 4030100 4642 1195 4692 20777;20778;20779;20780 13812 13812 1 LLSPQQPALQR TSSLTDPRLLSPQQPA PQQPALQRNSVSPGLP R L L Q R N 1 1 0 0 0 3 0 0 0 0 3 0 0 0 2 1 0 0 0 0 0 11 0 1249.7143 Q14814-6;Q14814-3;Q5T9U4;Q14814-5;Q14814-4;Q14814-2;Q14814 Q14814-6 132 142 MEF2D Myocyte-specific enhancer factor 2D yes no 2 0.02569 62.633 By matching By matching By matching By matching By matching By MS/MS 1 582340 0 0 0 0 0 582340 4643 1116 4693 20781 13813 13813 0 LLSPYSPQTQETDSAVQK GYEKKRSKLLSPYSPQ ETDSAVQKELRNQTPA K L L Q K E 1 0 0 1 0 3 1 0 0 0 2 1 0 0 2 3 2 0 1 1 0 18 0 1990.9848 E9PHD6;Q9P265 E9PHD6 48 65 DIP2B Disco-interacting protein 2 homolog B yes no 2 0.0017373 56.121 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 6634700 2459800 1259900 0 667170 0 2247700 4644 437 4694 20782;20783;20784;20785 13814;13815;13816 13814 3 LLSTGPTEPWSIREK ________________ EPWSIREKLCLASSVM K L L E K L 0 1 0 0 0 0 2 1 0 1 2 1 0 0 2 2 2 1 0 0 0 15 1 1712.9097 H7C128;H7C179;Q9H0E9-4;B5MCW3;H7C127;Q9H0E9-2;Q9H0E9;F8WBH2;F8WDX5;D6RID0;F8WCS7;C9JV05 H7C128 4 18 BRD8 Bromodomain-containing protein 8 yes no 3 9.9292E-43 122.78 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 42903000 0 11461000 0 18307000 0 13135000 4645 171 4695 20786;20787;20788;20789 13817;13818;13819;13820 13820 4 LLTEIHGGAGGPSGRAEAGRALASGTEASSTDPGAPGGPGGAEGPMAK EEYAARARLLTEIHGG GAEGPMAKKHAGERDK R L L A K K 9 2 0 1 0 0 4 13 1 1 3 1 1 0 5 4 3 0 0 0 0 48 2 4327.0887 Q16763 Q16763 150 197 UBE2S Ubiquitin-conjugating enzyme E2 S yes yes 5 5.4342E-08 24.31 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 10283000 0 0 5295700 4986800 0 0 4646 1156 4696 20790;20791 13821;13822 13822 2 LLTMSCSDK DGVLQGERLLTMSCSD LTMSCSDKIARWNVVG R L L D K I 0 0 0 1 1 0 0 0 0 0 2 1 1 0 0 2 1 0 0 0 0 9 0 1053.4835 P78563-2;P78563-3;P78563-4;G5E9B4;P78563;F5H398 P78563-2 511 519 ADARB1 Double-stranded RNA-specific editase 1 yes no 2 0.0062431 92.838 By matching By matching By matching By matching By MS/MS By matching 1 1 2203100 0 0 0 0 619500 1583600 4647 593 4697 20792;20793 13823 13823 1 LLTSPSLKPSAVSSVTSSTSLSK GGTQGVAKLLTSPSLK TSSTSLSKGASGTVLL K L L S K G 1 0 0 0 0 0 0 0 0 0 4 2 0 0 2 9 3 0 0 2 0 23 1 2276.2475 Q9NPG3-2;Q9NPG3 Q9NPG3-2 987 1009 UBN1 Ubinuclein-1 yes no 3 6.9903E-33 92.551 By matching By MS/MS By matching By matching By matching By matching 1 15278000 0 15278000 0 0 0 0 4648 1528 4698 20794 13824 13824 0 LLYNRPGTVSSLK DELRNLHKLLYNRPGT PGTVSSLKKNVGQFSG K L L L K K 0 1 1 0 0 0 0 1 0 0 3 1 0 0 1 2 1 0 1 1 0 13 1 1446.8195 P35659;P35659-2;B4DFG0;D6R9L5;D6RDA2 P35659 112 124 DEK Protein DEK yes no 2;3 6.9664E-05 96.866 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 91190000 11031000 11862000 11268000 7122700 20540000 29366000 4649 901 4699 20795;20796;20797;20798;20799;20800;20801;20802;20803;20804;20805 13825;13826;13827;13828;13829;13830;13831;13832;13833;13834;13835 13833 10 LLYQIAQAEAK AKPFSMEKLLYQIAQA QIAQAEAKKENGPTLS K L L A K K 3 0 0 0 0 2 1 0 0 1 2 1 0 0 0 0 0 0 1 0 0 11 0 1246.6921 B7Z8L0;Q92833 B7Z8L0 889 899 JARID2 Protein Jumonji yes no 2 0.0258 60.691 By matching By matching By matching By matching By matching By MS/MS 1 2948600 0 0 0 0 0 2948600 4650 195 4700 20806 13836 13836 0 LLYTDRYPEEK TGIESADKLLYTDRYP TDRYPEEKSVITNLKR K L L E K S 0 1 0 1 0 0 2 0 0 0 2 1 0 0 1 0 1 0 2 0 0 11 1 1425.714 F8WDV8;Q15361 F8WDV8 566 576 TTF1 Transcription termination factor 1 yes no 3 0.0030771 84.687 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1917700 0 604840 0 244440 0 1068500 4651 570 4701 20807;20808;20809 13837 13837 1 LLYVTPEK SKKDPIIKLLYVTPEK LLYVTPEKICASNRLI K L L E K I 0 0 0 0 0 0 1 0 0 0 2 1 0 0 1 0 1 0 1 1 0 8 0 961.54843 P54132;F5H7R6;H0YNU5 P54132 762 769 BLM Bloom syndrome protein yes no 2 8.703E-05 113.71 By MS/MS By MS/MS By matching By matching By matching By matching 2 1 1 1 1 1 33664000 3559700 3677100 3525000 2143800 6929000 13830000 4652 965 4702 20810;20811;20812;20813;20814;20815;20816 13838;13839 13839 2 LMAEDEEGYRK IEKERMRRLMAEDEEG EDEEGYRKLIDQKKDK R L M R K L 1 1 0 1 0 0 3 1 0 0 1 1 1 0 0 0 0 0 1 0 0 11 1 1339.6078 P51531-2;P51531;F6VDE0;P51532-5;P51532-2;P51532-3;P51532-4;P51532;Q9HBD4 P51532-5 530 540 SMARCA2;SMARCA4 Probable global transcription activator SNF2L2;Transcription activator BRG1 no no 2;3 0.00018129 97.597 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 2 11989000 809420 1479100 599550 1030200 1190200 6880500 4653 952;951 4703 20817;20818;20819;20820;20821;20822;20823 13840;13841 13840 2 LMAQEQVR RSPRKSPRLMAQEQVR LMAQEQVRSLRQSTIA R L M V R S 1 1 0 0 0 2 1 0 0 0 1 0 1 0 0 0 0 0 0 1 0 8 0 973.5015 Q92576-2;Q92576;E9PE34;B3KP41;D6R9X2;D6RBF0 Q92576-2 44 51 PHF3 PHD finger protein 3 yes no 2 0.0079237 98.458 By MS/MS By MS/MS By matching By matching By matching By MS/MS 2 1 1 1 24772000 3245200 4027900 0 2270200 0 15229000 4654 1353 4704 20824;20825;20826;20827;20828 13842;13843;13844 13842 3 LMDGTSQALAK QGASNFDKLMDGTSQA GTSQALAKANSESSKD K L M A K A 2 0 0 1 0 1 0 1 0 0 2 1 1 0 0 1 1 0 0 0 0 11 0 1133.5751 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 314 324 WAPAL Wings apart-like protein homolog yes no 2 0.0018545 90.05 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 2 1 33294000 5229900 5829700 4188100 3189400 5697500 9159800 4655 1253 4705 20829;20830;20831;20832;20833;20834;20835;20836 13845;13846;13847;13848;13849;13850;13851 13848 7 LMEEIMSEK EKDEKLIRLMEEIMSE MEEIMSEKENKTIVFV R L M E K E 0 0 0 0 0 0 3 0 0 1 1 1 2 0 0 1 0 0 0 0 0 9 0 1108.5144 P17844;E7ETL9 P17844 332 340 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 2 4.6772E-56 148.69 By matching By matching By matching By matching By matching By MS/MS 1 1 1 9448300 0 0 1075700 0 1964300 6408300 4656 853 4706 20837;20838;20839 13852 13852 1 LMEEIMSEKENK EKDEKLIRLMEEIMSE IMSEKENKTIVFVETK R L M N K T 0 0 1 0 0 0 4 0 0 1 1 2 2 0 0 1 0 0 0 0 0 12 1 1479.6949 P17844;E7ETL9 P17844 332 343 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 2;3 6.6189E-97 150.14 By matching By MS/MS By matching By matching By matching By MS/MS 3 2 3 25607000 0 4827700 2107100 0 0 18672000 4657 853 4707;4708 20840;20841;20842;20843;20844;20845;20846;20847 13853;13854;13855;13856 13855 91 4 LMEEISTSAAPAARPAAAK SKKKIPRKLMEEISTS AARPAAAKLKASRLFQ K L M A K L 7 1 0 0 0 0 2 0 0 1 1 1 1 0 2 2 1 0 0 0 0 19 1 1883.9775 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A7E2D7 Q96L91-4 1403 1421 EP400 E1A-binding protein p400 yes no 3 1.9978E-10 91.616 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3250400 0 604230 755610 0 0 1890600 4658 1405 4709 20848;20849;20850 13857 13857 1 LMELHGEGSSSGK KPKFELGKLMELHGEG GEGSSSGKATGDETGA K L M G K A 0 0 0 0 0 0 2 3 1 0 2 1 1 0 0 3 0 0 0 0 0 13 0 1330.6187 D6RAT0;P61247;D6RG13;D6R9B6;H0Y9Y4 D6RAT0 191 203 RPS3A 40S ribosomal protein S3a yes no 2;3 1.7752E-34 120.84 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 2 1 41576000 10210000 722580 2480000 1922700 25186000 1054700 4659 321 4710 20851;20852;20853;20854;20855;20856;20857 13858;13859 13859 2 LMELHGEGSSSGKATGDETGAK KPKFELGKLMELHGEG TGDETGAKVERADGYE K L M A K V 2 0 0 1 0 0 3 5 1 0 2 2 1 0 0 3 2 0 0 0 0 22 1 2160.9957 D6RAT0;P61247;D6R9B6;H0Y9Y4 D6RAT0 191 212 RPS3A 40S ribosomal protein S3a yes no 3;4 8.3053E-07 65.598 By MS/MS By matching By matching By MS/MS By matching By matching 3 2 1 3 1 19353000 6944600 1577200 1231300 7874500 1724900 0 4660 321 4711 20858;20859;20860;20861;20862;20863;20864;20865;20866;20867 13860;13861;13862;13863 13863 4 LMIWDTR GSVADDQKLMIWDTRS KLMIWDTRSNTTSKPS K L M T R S 0 1 0 1 0 0 0 0 0 1 1 0 1 0 0 0 1 1 0 0 0 7 0 933.47422 Q16576;E9PC52;Q16576-2;Q5JP01;Q5JP02;Q09028-3;Q09028;Q09028-2;Q09028-4;H0YCT5;H0YF10;H0YDK2 Q16576 251 257 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 no no 2 0.0086822 98.418 By matching By MS/MS By matching By matching By matching By matching 1 45256000 0 45256000 0 0 0 0 4661 1153;1051 4712 20868 13864 13864 1 LMLSTSEYSQSPK SLTGDSCKLMLSTSEY SEYSQSPKMESLSSHR K L M P K M 0 0 0 0 0 1 1 0 0 0 2 1 1 0 1 4 1 0 1 0 0 13 0 1469.7072 Q12888;Q12888-2;A6NNK5;F8VY86;C9JXV0 Q12888 515 527 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.00046178 93.348 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 21992000 2626300 3576300 5117700 1887900 1992000 6792300 4662 1063 4713 20869;20870;20871;20872;20873;20874 13865;13866;13867;13868;13869 13869 5 LMQLTNVSR IHKAEHEKLMQLTNVS MQLTNVSRAKAEDALS K L M S R A 0 1 1 0 0 1 0 0 0 0 2 0 1 0 0 1 1 0 0 1 0 9 0 1060.5699 E9PED3;Q9P0K7-3;E7EMX7;Q9P0K7;Q9P0K7-2 E9PED3 655 663 RAI14 Ankycorbin yes no 2 0.0098714 85.355 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 3444100 0 0 364710 693070 921820 1464500 4663 347 4714 20875;20876;20877;20878 13870;13871 13871 2 LMQLVDHRGGGGGGGGR ANQAINPKLMQLVDHR GGGGGGGRSRYRTTSS K L M G R S 0 2 0 1 0 1 0 8 1 0 2 0 1 0 0 0 0 0 0 1 0 17 1 1622.806 Q92841-1;Q92841;Q92841-2;C9JMU5 Q92841-1 469 485 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 3;4 0.025203 52.527 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 2 2 2 75548000 0 8259400 7822500 9830400 16196000 33440000 4664 1361 4715;4716 20879;20880;20881;20882;20883;20884;20885;20886;20887;20888 13872;13873 13872 153 2 LMQLVDHRGGGGGGGGRSR ANQAINPKLMQLVDHR GGGGGRSRYRTTSSAN K L M S R Y 0 3 0 1 0 1 0 8 1 0 2 0 1 0 0 1 0 0 0 1 0 19 2 1865.9391 Q92841-1;Q92841;Q92841-2;C9JMU5 Q92841-1 469 487 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 4 0.0028629 49.223 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 75016000 0 5341400 17897000 13978000 13685000 24114000 4665 1361 4717 20889;20890;20891;20892;20893 13874;13875;13876 13876 3 LMQLVDHRGGGGGGGK ANQAINPKLMQLVDHR GGGGGGGKGGRSRYRT K L M G K G 0 1 0 1 0 1 0 7 1 0 2 1 1 0 0 0 0 0 0 1 0 16 1 1537.7783 Q92841-3;H3BLZ8;Q59F66 Q92841-3 469 484 DDX17 Probable ATP-dependent RNA helicase DDX17 yes no 3 7.7039E-07 90.759 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 2 1 1 3 1 131010000 6086400 19505000 15002000 13482000 39927000 37004000 4666 629 4718 20894;20895;20896;20897;20898;20899;20900;20901;20902 13877;13878;13879;13880;13881;13882 13881 5 LMTPKPVSIATNR SQYPPVQRLMTPKPVS PVSIATNRSVYFKPSL R L M N R S 1 1 1 0 0 0 0 0 0 1 1 1 1 0 2 1 2 0 0 1 0 13 1 1426.7966 P49790;F6QR24;Q4LE47 P49790 367 379 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 3 3.8675E-09 103.11 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 11782000 2012800 1077500 885420 956050 1317700 5532200 4667 531 4719 20903;20904;20905;20906;20907;20908 13883 13883 1 LNCQVIGASVDSHFCHLAWVNTPKK DRAEEFKKLNCQVIGA AWVNTPKKQGGLGPMN K L N K K Q 2 0 2 1 2 1 0 1 2 1 2 2 0 1 1 2 1 1 0 3 0 25 1 2880.4163 Q06830 Q06830 69 93 PRDX1 Peroxiredoxin-1 yes yes 4 2.2872E-09 64.349 By matching By matching By matching By MS/MS By matching By matching 1 24154000 0 0 0 24154000 0 0 4668 1044 4720 20909 13884 13884 1 LNEIVGNEDTVSR VEKYRPVKLNEIVGNE GNEDTVSRLEVFAREG K L N S R L 0 1 2 1 0 0 2 1 0 1 1 0 0 0 0 1 1 0 0 2 0 13 0 1444.7158 P35250-2;P35250;H7C5S7;H7C5P1;H7C5Q7;F8WC37;H7C5A0;H7C5G4 P35250-2 47 59 RFC2 Replication factor C subunit 2 yes no 2 3.6049E-60 135.04 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 5977100 0 1297500 0 0 0 4679500 4669 895 4721 20910;20911;20912 13885;13886 13885 2 LNEQHQLILSK SCREKAQKLNEQHQLI QHQLILSKLLREEDNK K L N S K L 0 0 1 0 0 2 1 0 1 1 3 1 0 0 0 1 0 0 0 0 0 11 0 1321.7354 E7ETU6;Q8IYB5-3;Q8IYB5-2;Q8IYB5 E7ETU6 13 23 SMAP1 Stromal membrane-associated protein 1 yes no 2;3 3.3524E-238 188.48 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 169640000 26998000 30380000 20405000 18480000 21696000 51685000 4670 382 4722 20913;20914;20915;20916;20917;20918;20919;20920;20921;20922;20923;20924;20925 13887;13888;13889;13890;13891;13892;13893;13894;13895;13896;13897;13898;13899 13894 13 LNEQQSVLQR EMNTLQQKLNEQQSVL EQQSVLQRIAAPNMKA K L N Q R I 0 1 1 0 0 3 1 0 0 0 2 0 0 0 0 1 0 0 0 1 0 10 0 1213.6415 Q14683 Q14683 1010 1019 SMC1A Structural maintenance of chromosomes protein 1A yes yes 2 3.5758E-15 121.36 By matching By matching By matching By matching By matching By MS/MS 1 1 4782400 0 0 200460 0 0 4581900 4671 1110 4723 20926;20927 13900 13900 1 LNESLDENFK EISSTHKKLNESLDEN ESLDENFKKFHKEIIH K L N F K K 0 0 2 1 0 0 2 0 0 0 2 1 0 1 0 1 0 0 0 0 0 10 0 1207.5721 Q9UHR4 Q9UHR4 85 94 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 2 0.0097058 75.229 By MS/MS By MS/MS By matching By matching By matching By matching 1 2 1 5325000 1500100 1785300 0 0 2039600 0 4672 1595 4724 20928;20929;20930;20931 13901;13902 13901 2 LNESTFDTQITK VLKSRFTKLNESTFDT TFDTQITKKMGYYKIL K L N T K K 0 0 1 1 0 1 1 0 0 1 1 1 0 1 0 1 3 0 0 0 0 12 0 1395.6882 P78527;E7EUY0;P78527-2 P78527 1858 1869 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 2.3726E-98 154.36 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 77745000 6283800 6988200 5502600 2959700 15536000 40475000 4673 1012 4725 20932;20933;20934;20935;20936;20937 13903;13904;13905;13906;13907;13908 13906 6 LNESTFDTQITKK VLKSRFTKLNESTFDT FDTQITKKMGYYKILD K L N K K M 0 0 1 1 0 1 1 0 0 1 1 2 0 1 0 1 3 0 0 0 0 13 1 1523.7831 P78527;E7EUY0;P78527-2 P78527 1858 1870 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 3.1928E-11 99.669 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 14392000 540050 0 1852100 1542100 10458000 0 4674 1012 4726 20938;20939;20940;20941;20942 13909;13910;13911 13910 3 LNFNSPDCLDYK AAASSAWKLNFNSPDC SPDCLDYKDQASWRFQ K L N Y K D 0 0 2 2 1 0 0 0 0 0 2 1 0 1 1 1 0 0 1 0 0 12 0 1484.6606 P32242 P32242 333 344 OTX1 Homeobox protein OTX1 yes yes 2 0.00023449 95.273 By matching By MS/MS By matching By matching By matching By matching 1 8242600 0 8242600 0 0 0 0 4675 889 4727 20943 13912 13912 1 LNFSHGTHEYHAETIK KSGMNVARLNFSHGTH EYHAETIKNVRTATES R L N I K N 1 0 1 0 0 0 2 1 3 1 1 1 0 1 0 1 2 0 1 0 0 16 0 1882.8962 P14618;H3BQ34;H3BTN5;P14618-2;H3BT25;H3BUW1;H3BTJ2 P14618 74 89 PKM Pyruvate kinase PKM;Pyruvate kinase yes no 3 0.033889 36.592 By matching By matching By matching By matching By matching By MS/MS 1 1 2692600 0 0 0 0 1563400 1129200 4676 837 4728 20944;20945 13913 13913 1 LNGISKGADSELSTVPSVTK PKKASFQKLNGISKGA STVPSVTKTQASSSFQ K L N T K T 1 0 1 1 0 0 1 2 0 1 2 2 0 0 1 4 2 0 0 2 0 20 1 2002.0582 P46087;Q3KQS4;P46087-2 P46087 650 669 NOP2 Putative ribosomal RNA methyltransferase NOP2 yes no 3 1.03E-65 121.44 By MS/MS By matching By matching By matching By matching By matching 1 29000000 29000000 0 0 0 0 0 4677 923 4729 20946 13914;13915 13915 2 LNHVAAGLVSPSLK LMSTVDPKLNHVAAGL GLVSPSLKSDTSSKEI K L N L K S 2 0 1 0 0 0 0 1 1 0 3 1 0 0 1 2 0 0 0 2 0 14 0 1404.8089 Q5T760;Q5T757;Q05519-2;Q05519 Q5T760 198 211 SRSF11 Serine/arginine-rich splicing factor 11 yes no 3 0.0023526 62.035 By matching By matching By matching By matching By matching By MS/MS 1 1 4722900 1256800 0 0 0 0 3466000 4678 1039 4730 20947;20948 13916 13916 1 LNISFPATGCQK ________________ FPATGCQKLIEVDDER K L N Q K L 1 0 1 0 1 1 0 1 0 1 1 1 0 1 1 1 1 0 0 0 0 12 0 1334.6653 A2A3R7;P62753 A2A3R7 3 14 RPS6 40S ribosomal protein S6 yes no 2 0.014704 55.105 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 13483000 6675400 0 0 0 0 6807600 4679 5 4731 20949;20950 13917;13918 13918 1 LNKQQTDIAVNWAGGLHHAK GSVASAVKLNKQQTDI AGGLHHAKKSEASGFC K L N A K K 3 0 2 1 0 2 0 2 2 1 2 2 0 0 0 0 1 1 0 1 0 20 1 2200.1501 Q13547;Q5TEE2 Q13547 124 143 HDAC1 Histone deacetylase 1 yes no 3;4;5 1.06E-100 133.32 By matching By MS/MS By MS/MS By matching By matching By MS/MS 3 2 1 1 3 79803000 0 4629000 46807000 1299900 1098000 25969000 4680 1086 4732 20951;20952;20953;20954;20955;20956;20957;20958;20959;20960 13919;13920;13921;13922;13923;13924 13919 6 LNKQQTDIAVNWAGGLHHAKK GSVASAVKLNKQQTDI GGLHHAKKSEASGFCY K L N K K S 3 0 2 1 0 2 0 2 2 1 2 3 0 0 0 0 1 1 0 1 0 21 2 2328.2451 Q13547;Q5TEE2 Q13547 124 144 HDAC1 Histone deacetylase 1 yes no 4 0.004815 44.831 By matching By matching By MS/MS By matching By matching By matching 1 1449700 0 0 1449700 0 0 0 4681 1086 4733 20961 13925 13925 1 LNLESDVR GEPARVSKLNLESDVR LNLESDVRGQEASSTG K L N V R G 0 1 1 1 0 0 1 0 0 0 2 0 0 0 0 1 0 0 0 1 0 8 0 944.49271 Q9HAT3 Q9HAT3 100 107 CACNA1B yes yes 2 0.0064467 95.909 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 228210000 19544000 57628000 27956000 12957000 28460000 81661000 4682 1512 4734 20962;20963;20964;20965;20966;20967 13926;13927;13928;13929;13930;13931 13930 6 LNLLAHSRPPVPEWDISQDPPKHK LEQGLGARLNLLAHSR SQDPPKHKDSGTLTLG R L N H K D 1 1 1 2 0 1 1 0 2 1 3 2 0 0 5 2 0 1 0 1 0 24 2 2773.4664 Q9H6R4-4;Q9H6R4;Q9H6R4-2;G8JLK7;Q9H6R4-3;F5H6M7 Q9H6R4-4 519 542 NOL6 Nucleolar protein 6 yes no 4 0.00081424 52.522 By matching By matching By matching By matching By matching By MS/MS 1 18759000 0 0 0 0 0 18759000 4683 1497 4735 20968 13932 13932 1 LNLSSNELK SSLSSLVRLNLSSNEL NLSSNELKSLPAEINR R L N L K S 0 0 2 0 0 0 1 0 0 0 3 1 0 0 0 2 0 0 0 0 0 9 0 1016.5502 Q9H9A6 Q9H9A6 202 210 LRRC40 Leucine-rich repeat-containing protein 40 yes yes 2 0.025209 66.962 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 6887700 548220 1729200 845190 0 0 3765100 4684 1505 4736 20969;20970;20971;20972 13933 13933 1 LNNCGMGIGGGK CFTLQELKLNNCGMGI GMGIGGGKILAAALTE K L N G K I 0 0 2 0 1 0 0 5 0 1 1 1 1 0 0 0 0 0 0 0 0 12 0 1176.538 P46060;F8W7I9;H0Y4Q3 P46060 149 160 RANGAP1 Ran GTPase-activating protein 1 yes no 2 0.025274 49.632 By matching By matching By matching By matching By matching By MS/MS 1 1016300 0 0 0 0 0 1016300 4685 921 4737 20973 13934 13934 1 LNPADAPNPVVFVATK QPAAKRQKLNPADAPN PVVFVATKDTRALRKA K L N T K D 3 0 2 1 0 0 0 0 0 0 1 1 0 1 3 0 1 0 0 3 0 16 0 1651.8934 O94776;Q68DB1 O94776 596 611 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 2 0.001419 75.91 By matching By matching By MS/MS By matching By matching By matching 1 22016000 0 0 22016000 0 0 0 4686 754 4738 20974 13935 13935 1 LNQIMVGTGNGLAK VRCLWHPKLNQIMVGT GTGNGLAKVYYDPNKS K L N A K V 1 0 2 0 0 1 0 3 0 1 2 1 1 0 0 0 1 0 0 1 0 14 0 1414.7602 Q9NW82 Q9NW82 483 496 WDR70 WD repeat-containing protein 70 yes yes 2 0.013114 48.608 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 2662900 0 461700 0 526470 0 1674800 4687 1553 4739 20975;20976;20977 13936;13937 13936 2 LNQLKPGLQYK QAMNALMRLNQLKPGL LKPGLQYKLVSQTGPV R L N Y K L 0 0 1 0 0 2 0 1 0 0 3 2 0 0 1 0 0 0 1 0 0 11 1 1300.7503 Q12906-5;Q12906-4;Q12906-2;Q12906-6;Q12906-3;C9JFV5;Q12906;G5E9M5;B4DFG4 Q12906-5 409 419 ILF3 Interleukin enhancer-binding factor 3 yes no 2;3 1.4628E-19 120.45 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 3 2 76333000 5480600 10866000 8927700 3529400 18716000 28814000 4688 243 4740 20978;20979;20980;20981;20982;20983;20984;20985;20986;20987;20988;20989;20990 13938;13939;13940;13941;13942;13943;13944;13945;13946;13947 13946 10 LNQPPEDGISSVK MTGSNEFKLNQPPEDG EDGISSVKFSPNTSQF K L N V K F 0 0 1 1 0 1 1 1 0 1 1 1 0 0 2 2 0 0 0 1 0 13 0 1382.7042 O43684-2;O43684 O43684-2 9 21 BUB3 Mitotic checkpoint protein BUB3 yes no 2 0.0012865 76.326 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 31885000 0 4120500 2667200 1696800 7664500 15736000 4689 719 4741 20991;20992;20993;20994;20995 13948;13949;13950;13951;13952;13953 13948 6 LNQSGTSVGTDEESDVTQEEER SPSKSPAKLNQSGTSV DVTQEEERDGQYFEPV K L N E R D 0 1 1 2 0 2 5 2 0 0 1 0 0 0 0 3 3 0 0 2 0 22 0 2409.0415 P49792;E9PGT0;P0DJD0;P0DJD1;F8VYC4;E7ES93;B4DTM4;Q7Z3J3 P49792 2284 2305 RANBP2;RGPD1;RGPD2;RGPD4 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RanBP2-like and GRIP domain-containing protein 4 no no 2;3 0.0099404 38.724 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 2 12651000 0 4033400 1429500 2309200 4878400 0 4690 945;1251 4742 20996;20997;20998;20999;21000 13954;13955 13954 2 LNQVARQQSHFAMMHGGTGFAGIDSSSPEVK ISPLDLAKLNQVARQQ DSSSPEVKGYWASLDA K L N V K G 3 1 1 1 0 3 1 4 2 1 1 1 2 2 1 4 1 0 0 2 0 31 1 3286.5612 Q15365 Q15365 238 268 PCBP1 Poly(rC)-binding protein 1 yes yes 4;5 1.3986E-07 49.967 By matching By matching By matching By matching By matching By MS/MS 2 68643000 0 0 0 0 0 68643000 4691 1135 4743 21001;21002 13956;13957 13957 2 LNRQQTDMAVNWAGGLHHAK GSVAGAVKLNRQQTDM AGGLHHAKKSEASGFC K L N A K K 3 1 2 1 0 2 0 2 2 0 2 1 1 0 0 0 1 1 0 1 0 20 1 2246.1127 Q92769;H3BM24;B3KRS5 Q92769 125 144 HDAC2 Histone deacetylase 2;Histone deacetylase yes no 3;4 6.2794E-27 104.16 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 2 86187000 0 0 19065000 0 3429400 63693000 4692 1358 4744 21003;21004;21005;21006 13958;13959;13960;13961 13961 4 LNRQQTDMAVNWAGGLHHAKK GSVAGAVKLNRQQTDM GGLHHAKKSEASGFCY K L N K K S 3 1 2 1 0 2 0 2 2 0 2 2 1 0 0 0 1 1 0 1 0 21 2 2374.2077 Q92769;H3BM24;B3KRS5 Q92769 125 145 HDAC2 Histone deacetylase 2;Histone deacetylase yes no 4;5 3.4742E-16 94.973 By matching By matching By matching By matching By matching By MS/MS 2 2 12734000 0 0 2857200 0 0 9877200 4693 1358 4745 21007;21008;21009;21010 13962;13963 13962 1 LNSGGGLSEELGSAR SDLAKRRKLNSGGGLS SEELGSARRSGEVTLT K L N A R R 1 1 1 0 0 0 2 4 0 0 3 0 0 0 0 3 0 0 0 0 0 15 0 1445.711 Q96KQ7-2;B0UZY3;Q96KQ7;B0UZY0;A2ABF8;B0UZY1;A2ABF9;H0YIM0;H0YHA9 Q96KQ7-2 230 244 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes no 2 0.00058651 82.349 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 6882000 707000 1422400 1061500 278110 569420 2843500 4694 7 4746 21011;21012;21013;21014;21015;21016 13964;13965;13966;13967 13967 4 LNSGGGLSEELGSARR SDLAKRRKLNSGGGLS EELGSARRSGEVTLTK K L N R R S 1 2 1 0 0 0 2 4 0 0 3 0 0 0 0 3 0 0 0 0 0 16 1 1601.8121 Q96KQ7-2;B0UZY3;Q96KQ7;B0UZY0;A2ABF8;B0UZY1;A2ABF9;H0YIM0;H0YHA9 Q96KQ7-2 230 245 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes no 3 0.0008143 69.045 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 13012000 0 3314000 2455700 922130 1921000 4399600 4695 7 4747 21017;21018;21019;21020;21021 13968;13969 13968 2 LNTIIIK FVDGLHEKLNTIIIKA KLNTIIIKASAKGGNL K L N I K A 0 0 1 0 0 0 0 0 0 3 1 1 0 0 0 0 1 0 0 0 0 7 0 813.53239 Q9UK61-2;Q9UK61-3;Q9UK61-4;Q9UK61 Q9UK61-2 648 654 FAM208A Protein FAM208A yes no 2 0.0087167 98.458 By matching By matching By matching By matching By matching By MS/MS 1 1 1356200 0 0 0 0 383360 972850 4696 1600 4748 21022;21023 13970 13970 1 LNTLLQR KQMADTGKLNTLLQRA KLNTLLQRAPQCLGKF K L N Q R A 0 1 1 0 0 1 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 7 0 856.51305 Q00839;B3KX72;Q00839-2 Q00839 552 558 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 2 0.033822 84.916 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 8106500 699120 777830 533700 547160 1617700 3931000 4697 1022;1023 4749 21024;21025;21026;21027;21028;21029 13971 13971 1 LNTLLQRAPQCLGK KQMADTGKLNTLLQRA RAPQCLGKFIEIAARK K L N G K F 1 1 1 0 1 2 0 1 0 0 4 1 0 0 1 0 1 0 0 0 0 14 1 1610.8926 Q00839;B3KX72;Q00839-2 Q00839 552 565 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 3 9.6861E-199 168.83 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 121290000 63024000 7443400 0 10573000 6806300 33446000 4698 1022;1023 4750 21030;21031;21032;21033;21034 13972;13973;13974;13975;13976 13976 5 LNTSVDTHKIK PPETIKSKLNTSVDTH SVDTHKIKSSPSPEVV K L N I K S 0 0 1 1 0 0 0 0 1 1 1 2 0 0 0 1 2 0 0 1 0 11 1 1254.6932 Q15652-2;Q15652-3;Q15652 Q15652-2 408 418 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes no 3 0.003958 80.014 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 3945100 401980 522650 574640 608790 848390 988620 4699 1144 4751 21035;21036;21037;21038;21039;21040 13977 13977 1 LNVCVSKQPAIMPGQSYGLEDGSCSYK NNFMFGQKLNVCVSKQ EDGSCSYKDFSESRNN K L N Y K D 1 0 1 1 2 2 1 3 0 1 2 2 1 0 2 4 0 0 2 2 0 27 1 2987.3827 P14866;A6NIT8 P14866 449 475 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 3 7.2686E-220 154.17 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 990290000 0 193590000 138930000 154840000 262040000 240890000 4700 838 4752;4753 21041;21042;21043;21044;21045;21046;21047;21048;21049 13978;13979;13980;13981;13982;13983;13984;13985 13981 86 8 LPAELQELPGLSHQYWSAPSDKEGYSGVGLLSR ETKCSENKLPAELQEL SGVGLLSRQCPLKVSY K L P S R Q 2 1 0 1 0 2 3 4 1 0 6 1 0 0 3 5 0 1 2 1 0 33 1 3583.7947 G3V3C7;G3V5Q1;G3V3M6;P27695;G3V5M0;G3V359;H7C4A8 G3V3C7 104 136 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 6 0.033585 14.578 By matching By matching By matching By MS/MS By matching By matching 1 60156000 0 0 0 60156000 0 0 4701 584 4754 21050 13986 13986 0 LPIKVLK DPLRQANRLPIKVLKM RLPIKVLKMLTARTGH R L P L K M 0 0 0 0 0 0 0 0 0 1 2 2 0 0 1 0 0 0 0 1 0 7 1 809.57386 Q96F45-3;Q96F45-2;Q96F45 Q96F45-3 72 78 ZNF503 Zinc finger protein 503 yes no 2 6.4428E-07 122.15 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6804600 0 0 636570 838210 2264800 3065000 4702 1385 4755 21051;21052;21053;21054 13987 13987 1 LPLATIVK LKIHPLVRLPLATIVK LPLATIVKDLVAQAPL R L P V K D 1 0 0 0 0 0 0 0 0 1 2 1 0 0 1 0 1 0 0 1 0 8 0 853.56369 O94776;Q68DB1 O94776 515 522 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 2 0.008061 103.83 By matching By matching By matching By matching By matching By MS/MS 1 12885000 0 0 0 0 0 12885000 4703 754 4756 21055 13988;13989 13989 2 LPSRPGAQGVEPQNLR VGQQGLSKLPSRPGAQ GVEPQNLRTLQGHSVI K L P L R T 1 2 1 0 0 2 1 2 0 0 2 0 0 0 3 1 0 0 0 1 0 16 1 1717.9224 Q8WXI9 Q8WXI9 225 240 GATAD2B Transcriptional repressor p66-beta yes yes 3 0.0025534 65.467 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 19547000 297270 4965600 6096100 0 0 8188200 4704 1344 4757 21056;21057;21058;21059 13990;13991 13990 2 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR LKAELMERLQAALDDE LGGDSAGRSGAGLEQE R L Q G R S 5 2 1 4 0 1 3 7 0 0 4 0 1 0 2 2 0 0 0 0 0 32 1 3125.432 Q00839;Q00839-2 Q00839 38 69 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 3 0.0024358 31.923 By matching By MS/MS By matching By matching By matching By matching 1 13689000 0 13689000 0 0 0 0 4705 1022;1023 4758 21060 13992 13992 1 LQAAMASVIVRPSSSTK HVEKSSGKLQAAMASV VRPSSSTKTDSMPAMQ K L Q T K T 3 1 0 0 0 1 0 0 0 1 1 1 1 0 1 4 1 0 0 2 0 17 1 1744.9506 Q15652-2;Q15652-3;Q15652 Q15652-2 1079 1095 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes no 3 0.0025585 67.846 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 89188000 85990000 0 0 1447200 0 1750500 4706 1144 4759 21061;21062;21063 13993;13994 13993 2 LQADPKPISPQQK QTQNPESRLQADPKPI KPISPQQKSAHHEGRN R L Q Q K S 1 0 0 1 0 3 0 0 0 1 1 2 0 0 3 1 0 0 0 0 0 13 1 1448.7987 O75128-6;H7C1N2;O75128-3;O75128;O75128-7;O75128-2 O75128-6 349 361 COBL Protein cordon-bleu yes no 3 0.0019916 84.169 By matching By matching By matching By matching By matching By MS/MS 1 1 2494000 0 0 870030 0 0 1624000 4707 668 4760 21064;21065 13995 13995 1 LQAEISQAARK RTKAQLEKLQAEISQA EISQAARKTGIHTSTR K L Q R K T 3 1 0 0 0 2 1 0 0 1 1 1 0 0 0 1 0 0 0 0 0 11 1 1213.6779 E7EVD1;O43395;B4DSY9 E7EVD1 302 312 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes no 3 0.010174 56.043 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 6645600 1107000 1381200 0 330250 2419600 1407600 4708 389 4761 21066;21067;21068;21069;21070 13996;13997;13998;13999;14000 13999 5 LQAETEELEEEK RRRELTEKLQAETEEL TEELEEEKSGLQKEIA K L Q E K S 1 0 0 0 0 1 6 0 0 0 2 1 0 0 0 0 1 0 0 0 0 12 0 1446.6726 C9JCN8;P15408-3;P15408 C9JCN8 113 124 FOSL2 Fos-related antigen 2 yes no 2 0.00092463 92.856 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 11815000 2780200 0 1830800 4282800 266730 2654400 4709 240 4762 21071;21072;21073;21074;21075 14001;14002;14003;14004;14005 14002 5 LQAFGLNPK GCEFSRQRLQAFGLNP QAFGLNPKRLHFRQLG R L Q P K R 1 0 1 0 0 1 0 1 0 0 2 1 0 1 1 0 0 0 0 0 0 9 0 986.55492 Q8N9T8;D3YTE0;Q8N9T8-2 Q8N9T8 680 688 KRI1 Protein KRI1 homolog yes no 2 0.0061761 93.143 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 3469200 1003300 272960 0 0 0 2192900 4710 1312 4763 21076;21077;21078 14006;14007 14006 2 LQAQSLSTVGPR EEIRAKLRLQAQSLST SLSTVGPRLASEYLTP R L Q P R L 1 1 0 0 0 2 0 1 0 0 2 0 0 0 1 2 1 0 0 1 0 12 0 1255.6884 O43290;G3V1T2 O43290 374 385 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 2 0.0024533 74.537 By matching By MS/MS By matching By matching By matching By matching 1 692230 0 692230 0 0 0 0 4711 713 4764 21079 14008 14008 1 LQCPQCVFGTNCPK QDEGRSARLQCPQCVF VFGTNCPKTFVQHAKT R L Q P K T 0 0 1 0 3 2 0 1 0 0 1 1 0 1 2 0 1 0 0 1 0 14 0 1707.7531 Q9H582-2;Q9H582;F5GWV4 Q9H582-2 496 509 ZNF644 Zinc finger protein 644 yes no 2 1.5142E-07 95.264 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 6963700 4393000 1399100 0 1171500 0 0 4712 1492 4765 21080;21081;21082 14009;14010;14011;14012 14011 4 LQDLSSCITQGK GFDEFKVRLQDLSSCI SSCITQGKDAAVSKKA R L Q G K D 0 0 0 1 1 2 0 1 0 1 2 1 0 0 0 2 1 0 0 0 0 12 0 1348.6657 H3BT29;H3BUJ5;P29590-14;P29590-10;E9PBR7;P29590-4;H3BT57;P29590-12;P29590-2;P29590-5;P29590-9;P29590-13;P29590-3;P29590-8;P29590-11;H2N333;P29590;H3BVD2 H3BT29 155 166 PML Protein PML yes no 2 0.0040708 66.004 By matching By MS/MS By matching By matching By matching By matching 1 1 1 5467400 0 1124600 1167000 0 0 3175700 4713 408 4766 21083;21084;21085 14013 14013 1 LQDSVPENKGISLR KTNKEEHKLQDSVPEN ENKGISLRSRRQNKTE K L Q L R S 0 1 1 1 0 1 1 1 0 1 2 1 0 0 1 2 0 0 0 1 0 14 1 1554.8366 P46013;F5H4V4;P46013-2 P46013 3079 3092 MKI67 Antigen KI-67 no no 3 0.0026268 63.16 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 33216000 2223200 4887200 3618500 766750 5415100 16306000 4714 919;920 4767 21086;21087;21088;21089;21090;21091 14014 14014 1 LQEEKPSEDQIHK LRKLREEKLQEEKPSE PSEDQIHKLLPEDTET K L Q H K L 0 0 0 1 0 2 3 0 1 1 1 2 0 0 1 1 0 0 0 0 0 13 1 1579.7842 Q8NCN4 Q8NCN4 198 210 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 3 1.5577E-24 117.95 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 18988000 4225500 2720600 2253800 2155100 3180900 4452400 4715 1318 4768 21092;21093;21094;21095;21096;21097;21098 14015;14016;14017;14018;14019;14020;14021;14022 14020 8 LQEELSENDK EMQDKVIKLQEELSEN EELSENDKKIKALNHE K L Q D K K 0 0 1 1 0 1 3 0 0 0 2 1 0 0 0 1 0 0 0 0 0 10 0 1203.5619 O95347-2;O95347;Q5T821;F5GZR0 O95347-2 263 272 SMC2 Structural maintenance of chromosomes protein 2 yes no 2 1.339E-05 111.86 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 5543500 0 1211800 0 0 1566100 2765600 4716 770 4769 21099;21100;21101;21102 14023;14024;14025 14024 3 LQEKEDLQELNDR LSPTRITRLQEKEDLQ DLQELNDRLAVYIDRV R L Q D R L 0 1 1 2 0 2 3 0 0 0 3 1 0 0 0 0 0 0 0 0 0 13 1 1628.8006 P02545;P02545-3;Q6UYC3;P02545-2;Q3BDU5;Q5TCJ4 P02545 29 41 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.0085254 57.267 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 4399900 995800 1246900 842010 0 1315200 0 4717 783 4770 21103;21104;21105;21106 14026;14027 14027 2 LQEQVTDLRSQNTK IQNEQLEKLQEQVTDL DLRSQNTKISTQLDFA K L Q T K I 0 1 1 1 0 3 1 0 0 0 2 1 0 0 0 1 2 0 0 1 0 14 1 1658.8588 P12270 P12270 700 713 TPR Nucleoprotein TPR yes yes 3 0.0016899 67.997 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 9606900 804860 2359300 1233600 1590300 1624200 1994600 4718 827 4771 21107;21108;21109;21110;21111;21112 14028;14029;14030 14028 3 LQESIEYEDLGKNNSVK QPAVKRAKLQESIEYE LGKNNSVKTIALNLKK K L Q V K T 0 0 2 1 0 1 3 1 0 1 2 2 0 0 0 2 0 0 1 1 0 17 1 1964.9691 B3KXE0;P32780;E9PM51 B3KXE0 238 254 GTF2H1 General transcription factor IIH subunit 1 yes no 3 0.0015833 59.15 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 14143000 1538900 4374400 2159200 1066500 1525900 3477900 4719 77 4772 21113;21114;21115;21116;21117;21118 14031;14032;14033 14031 3 LQESQPGNAVIDK RENVAVAKLQESQPGN PGNAVIDKETIDLLAF K L Q D K E 1 0 1 1 0 2 1 1 0 1 1 1 0 0 1 1 0 0 0 1 0 13 0 1397.7151 Q6IQ49-2;C9JIQ2;Q6IQ49;Q6IQ49-3 Q6IQ49-2 358 370 SDE2 Protein SDE2 homolog yes no 2 0.020944 59.75 By matching By matching By matching By matching By matching By MS/MS 1 1 1164500 0 450210 0 0 0 714290 4720 249 4773 21119;21120 14034 14034 0 LQETLSAADR GVRCSLLRLQETLSAA ETLSAADRCGAALAGH R L Q D R C 2 1 0 1 0 1 1 0 0 0 2 0 0 0 0 1 1 0 0 0 0 10 0 1102.5619 P78527;E7EUY0;P78527-2 P78527 15 24 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.0026343 100.88 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6150800 0 1519300 269280 737930 0 3624300 4721 1012 4774 21121;21122;21123;21124 14035 14035 1 LQETQMSTTSK DFAEKERKLQETQMST TQMSTTSKLEEAEHKV K L Q S K L 0 0 0 0 0 2 1 0 0 0 1 1 1 0 0 2 3 0 0 0 0 11 0 1252.5969 P39880-2;P39880;P39880-3;P39880-4;P39880-5;P39880-6;H0YL76;G3V1Z6;Q13948-2;Q13948;H0YMA9 P39880-2 179 189 CUX1 Homeobox protein cut-like 1;Protein CASP yes no 2 0.021563 54.772 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1214100 126680 321700 354110 0 0 411610 4722 906 4775 21125;21126;21127;21128 14036 14036 1 LQGIDLDRTVQQVNQEK KIAQQAAKLQGIDLDR VQQVNQEKQEKQHKLD K L Q E K Q 0 1 1 2 0 4 1 1 0 1 2 1 0 0 0 0 1 0 0 2 0 17 1 1983.0385 Q92878-2;Q92878;Q92878-3 Q92878-2 822 838 RAD50 DNA repair protein RAD50 yes no 3 1.4028E-44 115.04 By matching By MS/MS By matching By MS/MS By matching By MS/MS 2 1 1 364650000 0 51206000 0 291330000 0 22111000 4723 1362 4776 21129;21130;21131;21132 14037;14038;14039;14040 14039 4 LQGIDLDRTVQQVNQEKQEK KIAQQAAKLQGIDLDR VNQEKQEKQHKLDTVS K L Q E K Q 0 1 1 2 0 5 2 1 0 1 2 2 0 0 0 0 1 0 0 2 0 20 2 2368.2347 Q92878-2;Q92878;Q92878-3 Q92878-2 822 841 RAD50 DNA repair protein RAD50 yes no 3 0.0012123 52.814 By matching By matching By MS/MS By matching By matching By matching 1 1 10086000 0 0 6770600 0 3315500 0 4724 1362 4777 21133;21134 14041 14041 0 LQGMVTETTMK DKRRLEARLQGMVTET MVTETTMKWEKECERR R L Q M K W 0 0 0 0 0 1 1 1 0 0 1 1 2 0 0 0 3 0 0 1 0 11 0 1237.6046 Q02241-2;H7BYN4;Q02241;B4E1K0 Q02241-2 614 624 KIF23 Kinesin-like protein KIF23 yes no 2 0.017889 57.225 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 15825000 2304200 2462200 209200 1304400 375100 9170100 4725 660 4778 21135;21136;21137;21138;21139;21140 14042;14043;14044 14043 3 LQGQAPGALEAGAAPAGRR VFDFLNEKLQGQAPGA GAAPAGRRSKDMYHAS K L Q R R S 6 2 0 0 0 2 1 4 0 0 2 0 0 0 2 0 0 0 0 0 0 19 1 1789.9547 Q8N5A5-3;Q8N5A5-2;Q8N5A5 Q8N5A5-3 393 411 ZGPAT Zinc finger CCCH-type with G patch domain-containing protein yes no 3 0.0026407 46.121 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 17480000 1545300 2330900 2539100 1338600 3986200 5739900 4726 1301 4779 21141;21142;21143;21144;21145;21146 14045 14045 1 LQGQFKGLVK LNRRKKMKLQGQFKGL GQFKGLVKAARRGSQV K L Q V K A 0 0 0 0 0 2 0 2 0 0 2 2 0 1 0 0 0 0 0 1 0 10 1 1116.6655 Q5JTH9-2;E9PCK7;Q5JTH9;F5H456 Q5JTH9-2 1169 1178 RRP12 RRP12-like protein yes no 2 3.8705E-47 137.05 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 19995000 4526600 1586300 3134500 3887000 4005300 2855500 4727 414 4780 21147;21148;21149;21150;21151;21152 14046;14047;14048;14049;14050 14048 5 LQGQLEQGDDTAAER KLLEEERRLQGQLEQG GDDTAAERLEKVYEEL R L Q E R L 2 1 0 2 0 3 2 2 0 0 2 0 0 0 0 0 1 0 0 0 0 15 0 1629.7594 Q8NE71;Q8NE71-2;H0YGW7 Q8NE71 397 411 ABCF1 ATP-binding cassette sub-family F member 1 yes no 2 6.6622E-21 110.55 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 9367400 1647800 1127200 618410 568280 2738700 2666900 4728 1321 4781 21153;21154;21155;21156;21157;21158;21159 14051;14052;14053;14054;14055;14056;14057 14057 7 LQGQLEQGDDTAAERLEK KLLEEERRLQGQLEQG TAAERLEKVYEELRAT R L Q E K V 2 1 0 2 0 3 3 2 0 0 3 1 0 0 0 0 1 0 0 0 0 18 1 1999.9811 Q8NE71;Q8NE71-2;H0YGW7 Q8NE71 397 414 ABCF1 ATP-binding cassette sub-family F member 1 yes no 3 6.2919E-273 178.47 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 61561000 5890400 5862200 4207600 10462000 24622000 10517000 4729 1321 4782 21160;21161;21162;21163;21164;21165 14058;14059;14060;14061 14059 3 LQIFSVEGQK LPSSHVARLQIFSVEG IFSVEGQKAIQIKHQD R L Q Q K A 0 0 0 0 0 2 1 1 0 1 1 1 0 1 0 1 0 0 0 1 0 10 0 1147.6237 A6NHR9;A6NHR9-2 A6NHR9 1039 1048 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes no 2 0.009282 76.332 By matching By matching By matching By matching By matching By MS/MS 1 11242000 0 0 0 0 0 11242000 4730 23 4783 21166 14062 14062 1 LQIQCVVEDDK PVGYGIRKLQIQCVVE QCVVEDDKVGTDLLEE K L Q D K V 0 0 0 2 1 2 1 0 0 1 1 1 0 0 0 0 0 0 0 2 0 11 0 1345.6548 E9PK01;P29692;E9PQZ1;P29692-3;E9PBQ9;P29692-2;E9PRY8 E9PK01 243 253 EEF1D Elongation factor 1-delta no no 2 0.00053364 95.477 By matching By MS/MS By matching By matching By matching By matching 1 1 1999000 0 1578400 0 0 0 420580 4731 451 4784 21167;21168 14063 14063 1 LQISTNLQRR TNELKSEKLQISTNLQ ISTNLQRRQQLEEQTV K L Q R R Q 0 2 1 0 0 2 0 0 0 1 2 0 0 0 0 1 1 0 0 0 0 10 1 1227.7048 Q92878-2;Q92878;Q92878-3 Q92878-2 881 890 RAD50 DNA repair protein RAD50 yes no 3 0.0095929 64.841 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 12349000 814840 3944600 2917500 1276900 0 3395400 4732 1362 4785 21169;21170;21171;21172;21173 14064 14064 1 LQLEETMPSPYGR VGKPKVKKLQLEETMP TMPSPYGRRIIPEITA K L Q G R R 0 1 0 0 0 1 2 1 0 0 2 0 1 0 2 1 1 0 1 0 0 13 0 1519.7341 Q02880-2;Q02880;B4DLV2 Q02880-2 1223 1235 TOP2B DNA topoisomerase 2-beta yes no 2 0.0099538 71.879 By matching By MS/MS By matching By matching By matching By matching 1 8646900 0 8646900 0 0 0 0 4733 1035 4786 21174 14065 14065 0 LQLEETMPSPYGRR VGKPKVKKLQLEETMP MPSPYGRRIIPEITAM K L Q R R I 0 2 0 0 0 1 2 1 0 0 2 0 1 0 2 1 1 0 1 0 0 14 1 1675.8352 Q02880-2;Q02880;B4DLV2 Q02880-2 1223 1236 TOP2B DNA topoisomerase 2-beta yes no 3 0.00068547 80.318 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 35069000 0 14312000 0 1557400 0 19200000 4734 1035 4787 21175;21176;21177 14066;14067 14066 2 LQLQAEER EKSDPHIKLQLQAEER LQLQAEERGVVSIKGV K L Q E R G 1 1 0 0 0 2 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 8 0 985.51926 P09038-2;P09038-3;P09038-1;P09038 P09038-2 62 69 FGF2 Fibroblast growth factor 2 yes no 2 0.02567 74.92 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 10298000 1398700 3115600 0 1124700 0 4658900 4735 809 4788 21178;21179;21180;21181 14068 14068 1 LQLQNPPAIHGSGSGSCQ SPARKLLKLQLQNPPA GSGSGSCQ________ K L Q C Q - 1 0 1 0 1 3 0 3 1 1 2 0 0 0 2 3 0 0 0 0 0 18 0 1849.8741 Q9H410;B4DWT2;Q5JW54;Q9H410-2;Q9H410-3 Q9H410 339 356 DSN1 Kinetochore-associated protein DSN1 homolog yes no 2 0.004769 47.082 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 7482400 0 1083900 1340100 1662200 1734400 1661700 4736 1488 4789 21182;21183;21184;21185;21186 14069 14069 1 LQLVRGGQAEK MEDEVQRRLQLVRGGQ VRGGQAEKLGEKERSE R L Q E K L 1 1 0 0 0 2 1 2 0 0 2 1 0 0 0 0 0 0 0 1 0 11 1 1197.683 B4E363;Q9Y285 B4E363 140 150 FARSA Phenylalanine--tRNA ligase alpha subunit yes no 3 0.037612 49.3 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 4064700 514560 811320 866820 0 715660 1156400 4737 165 4790 21187;21188;21189;21190;21191 14070 14070 1 LQNATPTNFKTK KVGKKKPKLQNATPTN TPTNFKTKTIHLPEQL K L Q T K T 1 0 2 0 0 1 0 0 0 0 1 2 0 1 1 0 3 0 0 0 0 12 1 1361.7303 E7ERG2;Q9NXF1-2;Q9NXF1 E7ERG2 25 36 TEX10 Testis-expressed sequence 10 protein yes no 3 4.2667E-18 114.71 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 12794000 1755500 1369900 1375700 1333400 3865800 3093400 4738 369 4791 21192;21193;21194;21195;21196;21197 14071;14072;14073;14074 14073 4 LQNELDMVK HDDATLARLQNELDMV QNELDMVKISKDPSKI R L Q V K I 0 0 1 1 0 1 1 0 0 0 2 1 1 0 0 0 0 0 0 1 0 9 0 1088.5536 P49916-2;P49916 P49916-2 741 749 LIG3 DNA ligase 3 yes no 2 0.0058015 94.85 By matching By matching By matching By matching By matching By MS/MS 1 1 2427100 0 462210 0 0 0 1964900 4739 947 4792 21198;21199 14075 14075 1 LQNIRDNVEKESK SLVQNSRKLQNIRDNV DNVEKESKRLKIS___ K L Q S K R 0 1 2 1 0 1 2 0 0 1 1 2 0 0 0 1 0 0 0 1 0 13 2 1571.8267 Q9H081 Q9H081 188 200 MIS12 Protein MIS12 homolog yes yes 3 0.029289 56.205 By MS/MS By matching By matching By matching By matching By matching 1 619230 619230 0 0 0 0 0 4740 1476 4793 21200 14076 14076 1 LQNKEHVIEALRR VIMSIRTKLQNKEHVI HVIEALRRAKFKFPGR K L Q R R A 1 2 1 0 0 1 2 0 1 1 2 1 0 0 0 0 0 0 0 1 0 13 2 1604.9111 H7C123;H7C2C5;F8W7C6;P27635 H7C123 52 64 RPL10 60S ribosomal protein L10 yes no 4 0.0012376 75.819 By matching By matching By matching By matching By matching By MS/MS 1 1 4788500 0 0 0 967310 0 3821200 4741 557 4794 21201;21202 14077 14077 1 LQNSASATALVSR HTFSPSPKLQNSASAT SATALVSRTGRHSERT K L Q S R T 3 1 1 0 0 1 0 0 0 0 2 0 0 0 0 3 1 0 0 1 0 13 0 1316.7048 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7;F5H7D9;H7C3H1 Q86YP4 551 563 GATAD2A Transcriptional repressor p66-alpha yes no 2 4.3539E-09 102.52 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 58234000 1068700 14111000 9520100 1088800 0 32445000 4742 170 4795 21203;21204;21205;21206;21207 14078;14079;14080;14081;14082 14082 5 LQNTGVADGYPVRLECR KPPVFIEKLQNTGVAD YPVRLECRVLGVPPPQ K L Q C R V 1 2 1 1 1 1 1 2 0 0 2 0 0 0 1 0 1 0 1 2 0 17 1 1946.9632 Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-5;Q8WX93-4;Q8WX93-2;Q8WX93-9;Q8WX93-7;H0YA05 Q8WX93-3 858 874 PALLD Palladin yes no 3 0.021561 39.629 By matching By MS/MS By matching By matching By matching By matching 1 1 4997900 0 1450800 0 0 0 3547100 4743 1343 4796 21208;21209 14083 14083 1 LQNVNRDIQR EIPELRNKLQNVNRDI NVNRDIQRLKNDIEEQ K L Q Q R L 0 2 2 1 0 2 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 10 1 1254.6793 Q92878-2;Q92878;Q92878-3 Q92878-2 760 769 RAD50 DNA repair protein RAD50 yes no 3 0.020931 63.184 By matching By matching By matching By matching By matching By MS/MS 1 3372700 0 0 0 0 0 3372700 4744 1362 4797 21210 14084 14084 1 LQPEEADVPAYPK KMDEKRTRLQPEEADV ADVPAYPKVATVPQSE R L Q P K V 2 0 0 1 0 1 2 0 0 0 1 1 0 0 3 0 0 0 1 1 0 13 0 1455.7246 Q9BTC0 Q9BTC0 1218 1230 DIDO1 Death-inducer obliterator 1 yes yes 2 0.0012701 78.324 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 11837000 2640300 1173400 1486600 972840 2244700 3319100 4745 1447 4798 21211;21212;21213;21214;21215;21216 14085;14086;14087;14088 14086 4 LQQAAQQHIQQQLLAK EEMEKYSKLQQAAQQH IQQQLLAKQVKAFPAS K L Q A K Q 3 0 0 0 0 7 0 0 1 1 3 1 0 0 0 0 0 0 0 0 0 16 0 1845.0221 Q9UKJ3;Q9UKJ3-2 Q9UKJ3 1323 1338 GPATCH8 G patch domain-containing protein 8 yes no 3 0.012292 42.682 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 6840900 1629900 1058300 1254300 586900 0 2311500 4746 1601 4799 21217;21218;21219;21220;21221 14089;14090;14091 14089 3 LQQAQEMLK QQQLVDAKLQQAQEML QQAQEMLKEAEERHQR K L Q L K E 1 0 0 0 0 3 1 0 0 0 2 1 1 0 0 0 0 0 0 0 0 9 0 1087.5696 P40222 P40222 341 349 TXLNA Alpha-taxilin yes yes 2 0.0060612 96.665 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 10070000 0 961370 952930 545320 3556000 4054600 4747 907 4800 21222;21223;21224;21225;21226 14092;14093 14093 2 LQQESTFLFHGNKTEDTPDK PSLFGSTKLQQESTFL KTEDTPDKKMEVASEK K L Q D K K 0 0 1 2 0 2 2 1 1 0 2 2 0 2 1 1 3 0 0 0 0 20 1 2334.1128 Q9UKX7-2;Q9UKX7 Q9UKX7-2 202 221 NUP50 Nuclear pore complex protein Nup50 yes no 4 0.0050115 45.82 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 4985600 0 1963400 1200000 348550 0 1473700 4748 1603 4801 21227;21228;21229;21230 14094 14094 1 LQQLGEAHQAETEVLRR GRKGLEARLQQLGEAH AETEVLRRELAEAMAA R L Q R R E 2 2 0 0 0 3 3 1 1 0 3 0 0 0 0 0 1 0 0 1 0 17 1 1977.0392 Q14980-2;Q14980;F5H4J1 Q14980-2 771 787 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3;4 0.0053647 43.05 By matching By matching By matching By matching By MS/MS By matching 2 1 2 2 13717000 0 4957100 1359300 0 3311400 4089200 4749 1121 4802 21231;21232;21233;21234;21235;21236;21237 14095;14096 14096 2 LQQLLQR LSGEEHEKLQQLLQRM KLQQLLQRMEQQEMAQ K L Q Q R M 0 1 0 0 0 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 7 0 897.5396 Q96EU6-2;Q96EU6 Q96EU6-2 162 168 RRP36 Ribosomal RNA processing protein 36 homolog no no 2 0.017928 94.163 By matching By matching By matching By matching By matching By MS/MS 1 1 2279500 0 838420 0 0 0 1441100 4750 1384 4803 21238;21239 14097 14097 0 LQQLQNQIR KPKLDPLKLQQLQNQI QQLQNQIRLEQEAGAR K L Q I R L 0 1 1 0 0 4 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 9 0 1139.6411 Q8WX93-3;Q8WX93 Q8WX93-3 278 286 PALLD Palladin yes no 2 0.0086689 98.582 By matching By matching By matching By matching By matching By MS/MS 1 1 2916200 0 895350 0 0 0 2020800 4751 1343 4804 21240;21241 14098;14099 14098 2 LQQLWLK FSPHNHAKLQQLWLKA KLQQLWLKAHYIEAEK K L Q L K A 0 0 0 0 0 2 0 0 0 0 3 1 0 0 0 0 0 1 0 0 0 7 0 927.55419 Q9NPC8;Q15475 Q9NPC8 83 89 SIX2;SIX1 Homeobox protein SIX2;Homeobox protein SIX1 no no 2 8.8268E-73 158.38 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 112350000 0 0 14989000 12358000 10674000 74325000 4752 1525;1139 4805 21242;21243;21244;21245;21246 14100;14101;14102;14103 14101 4 LQQMQAESGFVQHVGFK FKKLKKQKLQQMQAES FVQHVGFKCDNCGIEP K L Q F K C 1 0 0 0 0 4 1 2 1 0 1 1 1 2 0 1 0 0 0 2 0 17 0 1932.9516 Q8IYH5-2;Q8IYH5;Q8IYH5-3 Q8IYH5-2 805 821 ZZZ3 ZZ-type zinc finger-containing protein 3 yes no 3 0.037329 48.391 By matching By matching By matching By MS/MS By matching By matching 1 2547100 0 0 0 2547100 0 0 4753 1290 4806 21247 14104 14104 0 LQQQAALSPTTAPAVSSVSK QEQEIEQRLQQQAALS PAVSSVSKQETIMRHH R L Q S K Q 4 0 0 0 0 3 0 0 0 0 2 1 0 0 2 4 2 0 0 2 0 20 0 1983.0637 Q8WXI9 Q8WXI9 479 498 GATAD2B Transcriptional repressor p66-beta yes yes 2;3 4.0456E-82 127.37 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 2 2 44361000 2149500 7062600 30592000 0 0 4556700 4754 1344 4807 21248;21249;21250;21251;21252;21253 14105;14106;14107;14108 14105 2 LQQQQRPEDAEDGAEGGGK GRRSRGRRLQQQQRPE DGAEGGGKRGEAGWEG R L Q G K R 2 1 0 2 0 4 3 4 0 0 1 1 0 0 1 0 0 0 0 0 0 19 1 2011.9195 Q08J23-2;Q08J23;D6RAS3 Q08J23-2 10 28 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes no 3 0.00060744 64.327 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 6811600 132470 796570 1291800 801930 976660 2812100 4755 1050 4808 21254;21255;21256;21257;21258;21259 14109;14110;14111 14109 3 LQQTTQLIK QQQLVDAKLQQTTQLI QQTTQLIKEADEKHQR K L Q I K E 0 0 0 0 0 3 0 0 0 1 2 1 0 0 0 0 2 0 0 0 0 9 0 1071.6288 Q9NUQ3;Q9NUQ3-2 Q9NUQ3 308 316 TXLNG Gamma-taxilin yes no 2 0.040191 59.931 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 9373400 987350 1183300 624940 618270 3090000 2869500 4756 1546 4809 21260;21261;21262;21263;21264;21265 14112 14112 1 LQQTTQLIKEADEK QQQLVDAKLQQTTQLI LIKEADEKHQREREFL K L Q E K H 1 0 0 1 0 3 2 0 0 1 2 2 0 0 0 0 2 0 0 0 0 14 1 1643.873 Q9NUQ3;Q9NUQ3-2 Q9NUQ3 308 321 TXLNG Gamma-taxilin yes no 3 0.0055299 55.98 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 2 1 1 1 11975000 2229600 1496600 2756000 1268900 1406200 2817400 4757 1546 4810 21266;21267;21268;21269;21270;21271;21272 14113;14114 14114 2 LQQTYAALNSK RRKAELVKLQQTYAAL TYAALNSKATFYGEQV K L Q S K A 2 0 1 0 0 2 0 0 0 0 2 1 0 0 0 1 1 0 1 0 0 11 0 1235.651 P46940;H0YLE8 P46940 1506 1516 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 2 6.5427E-08 109.72 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 64393000 5684400 5645200 9516200 10172000 12882000 20493000 4758 929 4811 21273;21274;21275;21276;21277;21278 14115;14116;14117;14118;14119;14120 14117 6 LQRAALKNPVK TMTKKVQKLQRAALKN AALKNPVKCAVSSKYQ K L Q V K C 2 1 1 0 0 1 0 0 0 0 2 2 0 0 1 0 0 0 0 1 0 11 2 1236.7666 Q9H0S4;G5E955;F5H1N9 Q9H0S4 215 225 DDX47 Probable ATP-dependent RNA helicase DDX47 yes no 3 0.0099651 83.862 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 32698000 0 5756000 9953700 4127500 6201000 6659700 4759 1481 4812 21279;21280;21281;21282;21283 14121;14122;14123;14124 14122 4 LQRAPLKSVGPDFGK FAHKRSERLQRAPLKS SVGPDFGKKRLGLPGD R L Q G K K 1 1 0 1 0 1 0 2 0 0 2 2 0 1 2 1 0 0 0 1 0 15 2 1611.9097 P78527;E7EUY0;P78527-2 P78527 2688 2702 PRKDC DNA-dependent protein kinase catalytic subunit yes no 4 0.0023339 58.885 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 5594800 0 0 1517700 1420400 269440 2387300 4760 1012 4813 21284;21285;21286;21287 14125 14125 1 LQRNENRDISEVIALGVPNPR AAPDKRSKLQRNENRD ALGVPNPRTSNEVQYD K L Q P R T 1 3 3 1 0 1 2 1 0 2 2 0 0 0 2 1 0 0 0 2 0 21 2 2389.2826 Q13573;G3V3A4;G3V4X8 Q13573 380 400 SNW1 SNW domain-containing protein 1 yes no 4 0.00010928 75.682 By matching By MS/MS By matching By matching By matching By matching 1 12271000 0 12271000 0 0 0 0 4761 583 4814 21288 14126 14126 0 LQSFDSPERK RGNDRREKLQSFDSPE SFDSPERKRIKYSRET K L Q R K R 0 1 0 1 0 1 1 0 0 0 1 1 0 1 1 2 0 0 0 0 0 10 1 1205.6041 Q86SS3;E9PGM9;P78332;B4DNY1 Q86SS3 498 507 RBM6 RNA-binding protein 6 yes no 3 0.00441 82.029 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 3513900 0 926940 748630 819360 0 1018900 4762 431 4815 21289;21290;21291;21292 14127;14128 14128 2 LQSGVNTLQGFKEDK RLGMTTGRLQSGVNTL LQGFKEDKRNKVTPVL R L Q D K R 0 0 1 1 0 2 1 2 0 0 2 2 0 1 0 1 1 0 0 1 0 15 1 1662.8577 Q9NPI1;Q9NPI1-2 Q9NPI1 378 392 BRD7 Bromodomain-containing protein 7 yes no 3 0.00077584 78.985 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2736500 0 844200 586010 0 0 1306300 4763 1529 4816 21293;21294;21295 14129 14129 1 LQSVQALTEIQEFISFISK LHQSRLTKLQSVQALT EFISFISKQGNLSSQV K L Q S K Q 1 0 0 0 0 3 2 0 0 3 2 1 0 2 0 3 1 0 0 1 0 19 0 2180.1729 P78527;E7EUY0;P78527-2 P78527 3129 3147 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0 229.75 By matching By matching By matching By matching By matching By MS/MS 1 34684000 0 0 0 0 0 34684000 4764 1012 4817 21296 14130 14130 1 LQTFLSK AENGLTVRLQTFLSKR RLQTFLSKRPMPLSAR R L Q S K R 0 0 0 0 0 1 0 0 0 0 2 1 0 1 0 1 1 0 0 0 0 7 0 835.48035 Q12789-3;Q12789;H7BYG6;H3BU55 Q12789-3 1156 1162 GTF3C1 General transcription factor 3C polypeptide 1 yes no 2 0.023905 87.323 By matching By matching By matching By matching By matching By MS/MS 1 5030600 0 0 0 0 0 5030600 4765 1059 4818 21297 14131 14131 1 LQTLSPALKAPEK SKRSQPDKLQTLSPAL PALKAPEKTRETGLSY K L Q E K T 2 0 0 0 0 1 1 0 0 0 3 2 0 0 2 1 1 0 0 0 0 13 1 1394.8133 Q13415 Q13415 283 295 ORC1 Origin recognition complex subunit 1 yes yes 3 0.0014536 75.589 By matching By MS/MS By matching By matching By matching By matching 1 1 3558600 0 1590500 0 0 0 1968100 4766 1080 4819 21298;21299 14132;14133 14133 2 LQTPNTFPK TPQAKKIKLQTPNTFP QTPNTFPKRKKGEKRA K L Q P K R 0 0 1 0 0 1 0 0 0 0 1 1 0 1 2 0 2 0 0 0 0 9 0 1044.5604 Q14978;Q14978-3;Q14978-2 Q14978 605 613 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2 1.9031E-06 113.66 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 29708000 0 0 1462200 0 2424800 25821000 4767 1120 4820 21300;21301;21302 14134;14135;14136;14137 14135 4 LQVSQTEPAK KSSALDQKLQVSQTEP VSQTEPAKSDLSKLES K L Q A K S 1 0 0 0 0 2 1 0 0 0 1 1 0 0 1 1 1 0 0 1 0 10 0 1099.5873 Q96T58 Q96T58 917 926 SPEN Msx2-interacting protein yes yes 2 0.01037 73.499 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 5359300 0 775200 846890 714690 1155100 1867400 4768 1422 4821 21303;21304;21305;21306;21307 14138;14139;14140;14141 14139 4 LQVVLNESNADTYAGRPLPSK KLGNYTLKLQVVLNES AGRPLPSKAIKFSVKE K L Q S K A 2 1 2 1 0 1 1 1 0 0 3 1 0 0 2 2 1 0 1 2 0 21 1 2271.1859 A6NHR9;A6NHR9-2 A6NHR9 792 812 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes no 3 0.020373 59.792 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 28942000 0 14223000 0 0 0 14718000 4769 23 4822 21308;21309 14142;14143 14143 1 LRAILQNQGN HSQALSGRLRAILQNQ AILQNQGN________ R L R G N - 1 1 2 0 0 2 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 10 1 1125.6255 B0QYD2;Q9UH17;P31941-2;P31941 B0QYD2 348 357 APOBEC3B;APOBEC3A DNA dC->dU-editing enzyme APOBEC-3B;DNA dC->dU-editing enzyme APOBEC-3A yes no 2 1.3495E-23 128.86 By matching By MS/MS By matching By matching By matching By matching 1 1 7504700 0 4209400 0 0 0 3295300 4770 56 4823 21310;21311 14144 14144 1 LRDAFSAQMVK GRSKPSSKLRDAFSAQ AFSAQMVKNTVNRKAL K L R V K N 2 1 0 1 0 1 0 0 0 0 1 1 1 1 0 1 0 0 0 1 0 11 1 1264.6598 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 761 771 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 3 0.0057495 71.268 By matching By matching By matching By matching By matching By MS/MS 1 1 2133400 0 0 371720 0 0 1761700 4771 1404 4824 21312;21313 14145;14146 14146 2 LRDCMSEMHR GLQTSDPRLRDCMSEM DCMSEMHRVVQESSSG R L R H R V 0 2 0 1 1 0 1 0 1 0 1 0 2 0 0 1 0 0 0 0 0 10 1 1333.5689 F8WBL8;A8K0A6;C9J3Q2;B7Z8Q9;G5E9X4;Q9UI32 F8WBL8 108 117 GLS2 Glutaminase liver isoform, mitochondrial yes no 2 0.0214 61.161 By matching By matching By MS/MS By matching By matching By matching 1 0 0 0 0 0 0 0 4772 35 4825 21314 14147 14147 6 1 LREDENAEPVGTTYQK SPVLHRLRLREDENAE PVGTTYQKTDAAVEMK R L R Q K T 1 1 1 1 0 1 3 1 0 0 1 1 0 0 1 0 2 0 1 1 0 16 1 1848.8854 Q16643;Q16643-2;A8MV58;D6R9W4 Q16643 150 165 DBN1 Drebrin yes no 3 0.0014337 69.331 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 13452000 1547500 2055700 2974700 1366500 1588800 3918700 4773 47 4826 21315;21316;21317;21318;21319;21320 14148;14149 14148 2 LREEGKVIEPLK NDTELIRKLREEGKVI GKVIEPLKDFHKDEVR K L R L K D 0 1 0 0 0 0 3 1 0 1 2 2 0 0 1 0 0 0 0 1 0 12 2 1409.8242 F8W720;B4DUT7;P49915 F8W720 302 313 GMPS GMP synthase [glutamine-hydrolyzing] yes no 3 0.00013984 100.02 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 16224000 0 2904900 3128300 1353900 2697400 6139500 4774 129 4827 21321;21322;21323;21324;21325 14150;14151;14152;14153 14152 4 LRELDPSLVSANDSPSGMQTR DNNASPQKLRELDPSL SPSGMQTRCVWSPLAS K L R T R C 1 2 1 2 0 1 1 1 0 0 3 0 1 0 2 4 1 0 0 1 0 21 1 2272.1118 Q5UIP0-2;Q5UIP0;H7C2B5 Q5UIP0-2 2148 2168 RIF1 Telomere-associated protein RIF1 yes no 3 9.6155E-160 148.75 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 30135000 0 9666300 6486200 4701200 0 9281600 4775 1201 4828 21326;21327;21328;21329 14154;14155;14156;14157 14157 3 LRENVFQEHQTLKEK QEHINIHKLRENVFQE EHQTLKEKELETGPKA K L R E K E 0 1 1 0 0 2 3 0 1 0 2 2 0 1 0 0 1 0 0 1 0 15 2 1898.001 Q14247;Q14247-3;Q14247-2;H7C314 Q14247 58 72 CTTN Src substrate cortactin yes no 4 0.014814 44.132 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 7599700 0 2307000 1825800 0 1343000 2123900 4776 1104 4829 21330;21331;21332;21333 14158 14158 1 LRESTPGDSPSTVNK ESFPSQAKLRESTPGD DSPSTVNKLLQLPSTT K L R N K L 0 1 1 1 0 0 1 1 0 0 1 1 0 0 2 3 2 0 0 1 0 15 1 1586.79 A2A306;E7EWG4;A6NCA8;F5H2U4;F5H2C8;Q5T6F2 A2A306 98 112 UBAP2 Ubiquitin-associated protein 2 yes no 3 0.0017107 68.168 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 6184900 823470 1467000 1137500 532440 877390 1347200 4777 4 4830 21334;21335;21336;21337;21338;21339 14159;14160;14161;14162 14160 4 LRGISTKPVYIPEVELNHK EFLEKASKLRGISTKP PEVELNHKLIKGIHQS K L R H K L 0 1 1 0 0 0 2 1 1 2 2 2 0 0 2 1 1 0 1 2 0 19 2 2192.2317 Q14258 Q14258 314 332 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 4 0.00031177 72.676 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 26831000 0 0 0 4410100 0 22420000 4778 1105 4831 21340;21341 14163;14164 14164 2 LRIEHQTITTPSKK LYGVGVEKLRIEHQTI TITTPSKKKIEISTIA K L R K K K 0 1 0 0 0 1 1 0 1 2 1 2 0 0 1 1 3 0 0 0 0 14 2 1650.9417 C9JU95;P40938 C9JU95 67 80 RFC3 Replication factor C subunit 3 yes no 4 0.012038 48.351 By matching By matching By matching By matching By matching By MS/MS 1 2072400 0 0 0 0 0 2072400 4779 270 4832 21342 14165 14165 1 LRITESEEVVSR ETENAGLRLRITESEE ESEEVVSREVSGIKAA R L R S R E 0 2 0 0 0 0 3 0 0 1 1 0 0 0 0 2 1 0 0 2 0 12 1 1416.7573 P02545;P02545-3;Q6UYC3;P02545-2;Q3BDU5;Q5TCJ4 P02545 61 72 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.0038319 67.997 By matching By MS/MS By matching By matching By matching By matching 1 1089500 0 1089500 0 0 0 0 4780 783 4833 21343 14166 14166 1 LRLGSGSNGLLR LSEEVSARLRLGSGSN SGSNGLLRRKVSIIET R L R L R R 0 2 1 0 0 0 0 3 0 0 4 0 0 0 0 2 0 0 0 0 0 12 1 1241.7204 B4DQ42;Q9HC62;E7ENF4;H7C1A0 B4DQ42 319 330 SENP2 Sentrin-specific protease 2 yes no 3 0.0021825 75.819 By matching By matching By matching By matching By matching By MS/MS 1 1604300 0 0 0 0 0 1604300 4781 115 4834 21344 14167 14167 1 LRLLQAETASNSAR KSQKLEERLRLLQAET ETASNSARAAERSSAL R L R A R A 3 2 1 0 0 1 1 0 0 0 3 0 0 0 0 2 1 0 0 0 0 14 1 1528.8322 Q14980-2;Q14980;F5H2L0;H0YFY6 Q14980-2 1269 1282 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.0011271 77.24 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 25448000 2700300 4251100 3205300 1292200 3324400 10675000 4782 1121 4835 21345;21346;21347;21348;21349;21350 14168;14169;14170;14171;14172;14173 14169 6 LRLQAQSLSTVGPR ELEEIRAKLRLQAQSL SLSTVGPRLASEYLTP K L R P R L 1 2 0 0 0 2 0 1 0 0 3 0 0 0 1 2 1 0 0 1 0 14 1 1524.8736 O43290;G3V1T2 O43290 372 385 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 3 0.0011289 72.209 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 4311300 1363400 1294200 0 0 0 1653600 4783 713 4836 21351;21352;21353 14174;14175 14175 2 LRNTPYQAPVRR AAAVRQSKLRNTPYQA PYQAPVRRQMKAKQLS K L R R R Q 1 3 1 0 0 1 0 0 0 0 1 0 0 0 2 0 1 0 1 1 0 12 2 1469.8215 P49790;F6QR24;Q4LE47 P49790 278 289 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 3 0.017186 63.864 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 6889700 788020 459500 0 661950 2515700 2464500 4784 531 4837 21354;21355;21356;21357;21358 14176 14176 1 LRPFVDGTAGASDPPCVR ARVRVAVRLRPFVDGT ASDPPCVRGMDSCSLE R L R V R G 2 2 0 2 1 0 0 2 0 0 1 0 0 1 3 1 1 0 0 2 0 18 1 1913.9418 Q14807;H3BQB9 Q14807 50 67 KIF22 Kinesin-like protein KIF22 yes no 3 6.9885E-14 98.077 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 50929000 0 5936300 12223000 1337300 16160000 15273000 4785 1115 4838 21359;21360;21361;21362;21363 14177;14178;14179 14179 3 LRPGALGGAADVEDTK AQAEGRCRLRPGALGG AADVEDTKEGEDEAKR R L R T K E 3 1 0 2 0 0 1 3 0 0 2 1 0 0 1 0 1 0 0 1 0 16 1 1568.8158 G5E960;Q01970 G5E960 940 955 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 yes no 3 0.0020729 58.658 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4633700 1188900 855610 0 0 816460 1772700 4786 591 4839 21364;21365;21366;21367 14180;14181;14182;14183;14184 14181 5 LRPTVTNDRSAPIIR ENPFATVKLRPTVTND DRSAPIIR________ K L R I R - 1 3 1 1 0 0 0 0 0 2 1 0 0 0 2 1 2 0 0 1 0 15 2 1707.9744 Q9UHR4 Q9UHR4 497 511 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 4 0.006465 50.088 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 8713100 0 898790 1323200 747030 1941700 3802500 4787 1595 4840 21368;21369;21370;21371;21372 14185 14185 1 LRPVPPYQHEEIIGK MILDPQQKLRPVPPYQ QHEEIIGKVCELINEV K L R G K V 0 1 0 0 0 1 2 1 1 2 1 1 0 0 3 0 0 0 1 1 0 15 1 1774.973 Q5T7W0-2;Q5T7W0 Q5T7W0-2 721 735 ZNF618 Zinc finger protein 618 yes no 3 1.7316E-30 115.83 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 6374900 514070 1427300 0 771800 439710 3222000 4788 1195 4841 21373;21374;21375;21376;21377 14186 14186 1 LRQEEPQSLQAAVR FLRQALCRLRQEEPQS QSLQAAVRTDGFDEFK R L R V R T 2 2 0 0 0 3 2 0 0 0 2 0 0 0 1 1 0 0 0 1 0 14 1 1623.8693 H3BT29;H3BUJ5;P29590-14;P29590-10;E9PBR7;P29590-4;H3BT57;P29590-12;P29590-2;P29590-5;P29590-9;P29590-13;P29590-3;P29590-8;P29590-11;H2N333;P29590;H3BVD2 H3BT29 131 144 PML Protein PML yes no 3 0.039271 39.629 By matching By matching By matching By matching By matching By MS/MS 1 1 1516400 0 0 254010 0 0 1262400 4789 408 4842 21378;21379 14187 14187 1 LRQENMELAER QHNERNSKLRQENMEL ENMELAERLKKLIEQY K L R E R L 1 2 1 0 0 1 3 0 0 0 2 0 1 0 0 0 0 0 0 0 0 11 1 1387.6878 P40222 P40222 298 308 TXLNA Alpha-taxilin yes yes 2 0.026071 64.827 By matching By matching By matching By matching By MS/MS By matching 1 1293600 0 0 0 0 1293600 0 4790 907 4843 21380 14188 14188 1 LRQQDLDGELR ALDADFRKLRQQDLDG QDLDGELRSEKEGRDR K L R L R S 0 2 0 2 0 2 1 1 0 0 3 0 0 0 0 0 0 0 0 0 0 11 1 1341.7001 Q99459 Q99459 242 252 CDC5L Cell division cycle 5-like protein yes yes 3 0.019478 56.414 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4299400 712920 1225000 0 0 966820 1394700 4791 1423 4844 21381;21382;21383;21384 14189 14189 1 LRSDAGLESDTAMK ________________ LESDTAMKKGETLRKQ K L R M K K 2 1 0 2 0 0 1 1 0 0 2 1 1 0 0 2 1 0 0 0 0 14 1 1492.7192 Q9NR30;Q3SWU7 Q9NR30 5 18 DDX21 Nucleolar RNA helicase 2 yes no 2;3 0.0010162 85.493 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3 2 2 3 3 78248000 18210000 10562000 3776400 5105000 27396000 13199000 4792 1534 4845;4846 21385;21386;21387;21388;21389;21390;21391;21392;21393;21394;21395;21396;21397;21398;21399;21400;21401 14190;14191;14192;14193;14194;14195;14196;14197;14198;14199 14197 174 10 LRSDCESQECVTK VGAVIYHKLRSDCESQ ESQECVTKLLQLQRSV K L R T K L 0 1 0 1 2 1 2 0 0 0 1 1 0 0 0 2 1 0 0 1 0 13 1 1610.7029 Q9NS86 Q9NS86 165 177 LANCL2 LanC-like protein 2 yes yes 3 0.0016255 80.371 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 10311000 763570 873170 1524500 708320 1760200 4681300 4793 1541 4847 21402;21403;21404;21405;21406;21407 14200;14201;14202;14203;14204 14204 5 LRSQDSMSSDTAR YIAEEYSRLRSQDSMS SMSSDTARTSPVTART R L R A R T 1 2 0 2 0 1 0 0 0 0 1 0 1 0 0 4 1 0 0 0 0 13 1 1452.6627 P25205;Q7Z6P5;E9PF11 P25205 597 609 MCM3 DNA replication licensing factor MCM3 yes no 3 0.015255 51.643 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 3018400 0 1017600 1644200 0 163970 192570 4794 873 4848 21408;21409;21410;21411 14205 14205 1 LRSQDSMSSDTARTSPVTAR YIAEEYSRLRSQDSMS RTSPVTARTLETLIRL R L R A R T 2 3 0 2 0 1 0 0 0 0 1 0 1 0 1 5 3 0 0 1 0 20 2 2165.0495 P25205;Q7Z6P5;E9PF11 P25205 597 616 MCM3 DNA replication licensing factor MCM3 yes no 4 0.0001291 65.924 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 8953400 0 2224500 1788200 0 2099900 2840900 4795 873 4849 21412;21413;21414;21415 14206;14207 14206 2 LRSRPQGLTEAEQR IQKLQRQRLRSRPQGL GLTEAEQRELEQEAKE R L R Q R E 1 3 0 0 0 2 2 1 0 0 2 0 0 0 1 1 1 0 0 0 0 14 2 1639.8754 Q00653-3;Q00653-4;Q00653 Q00653-3 159 172 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes no 4 0.004041 57.52 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 4094400 0 732740 659460 430770 1101600 1169800 4796 1021 4850 21416;21417;21418;21419;21420 14208 14208 1 LRSTNLDASENTGNKQDDK SPSRMIRKLRSTNLDA TGNKQDDKSSDKQLRI K L R D K S 1 1 3 3 0 1 1 1 0 0 2 2 0 0 0 2 2 0 0 0 0 19 2 2104.9985 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 1906 1924 AHCTF1 Protein ELYS yes no 3;4 0.0021708 51.127 By matching By MS/MS By matching By matching By matching By matching 2 2 2 2 7482300 1283500 1902400 0 0 1947800 2348600 4797 1345 4851 21421;21422;21423;21424;21425;21426;21427;21428 14209;14210 14210 2 LRSVVTPARVQFK FGALTAEKLRSVVTPA TPARVQFKTYPGVMHS K L R F K T 1 2 0 0 0 1 0 0 0 0 1 1 0 1 1 1 1 0 0 3 0 13 2 1499.8936 Q5QPQ0;E9PH41;O95372 Q5QPQ0 124 136 LYPLA2 Acyl-protein thioesterase 2 yes no 3 0.0025272 83.137 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 14348000 0 4255500 1371100 647410 3013100 5061100 4798 435 4852 21429;21430;21431;21432;21433 14211;14212 14211 1 LRTAGTICLETFK QDQVCIARLRTAGTIC TICLETFKDFPQMGRF R L R F K D 1 1 0 0 1 0 1 1 0 1 2 1 0 1 0 0 3 0 0 0 0 13 1 1508.8021 H3BR35;P15170;P15170-2;F5GWG9;Q8IYD1 H3BR35 433 445 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 3 1.7953E-07 92.295 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 6946000 0 0 0 6946000 0 0 4799 642 4853 21434;21435 14213;14214 14214 2 LRTAPGMGDQSGCYR HVQLSTSRLRTAPGMG GDQSGCYRCGKEGHWS R L R Y R C 1 2 0 1 1 1 0 3 0 0 1 0 1 0 1 1 1 0 1 0 0 15 1 1667.7508 Q9BWF3;E9PB51;Q9BQ04;B0LM41 Q9BWF3 150 164 RBM4;RBM4B;RBM14 RNA-binding protein 4;RNA-binding protein 4B;RNA-binding protein 14 yes no 3 0.0026244 62.104 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 1 1 1 8685500 350770 1859100 1824000 0 1079500 3572100 4800 1457 4854 21436;21437;21438;21439;21440;21441 14215;14216;14217 14217 3 LRTAPGMGDQSGCYRCGK HVQLSTSRLRTAPGMG SGCYRCGKEGHWSKEC R L R G K E 1 2 0 1 2 1 0 4 0 0 1 1 1 0 1 1 1 0 1 0 0 18 2 2012.8979 Q9BWF3;Q9BQ04;B0LM41 Q9BWF3 150 167 RBM4;RBM4B;RBM14 RNA-binding protein 4;RNA-binding protein 4B;RNA-binding protein 14 yes no 3;4 0.0016883 69.081 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 2 1 2 2 12737000 479930 1692300 4633500 1394000 1382100 3155600 4801 1457 4855 21442;21443;21444;21445;21446;21447;21448;21449;21450 14218;14219;14220;14221 14218 4 LRVAGVVAPTLPREDLEK WMGKGAAKLRVAGVVA LPREDLEKIIAHFLIQ K L R E K I 2 2 0 1 0 0 2 1 0 0 3 1 0 0 2 0 1 0 0 3 0 18 2 1962.1262 P46063 P46063 527 544 RECQL ATP-dependent DNA helicase Q1 yes yes 3;4 0.00052953 70.167 By matching By matching By matching By matching By matching By MS/MS 2 107620000 0 0 0 0 0 107620000 4802 922 4856 21451;21452 14222;14223 14223 2 LRVAYEGSDSEK KRPRKAQRLRVAYEGS YEGSDSEKGEGAEPLK R L R E K G 1 1 0 1 0 0 2 1 0 0 1 1 0 0 0 2 0 0 1 1 0 12 1 1352.6572 H3BPD5;P78549;H3BRL9;H3BUV2 H3BPD5 44 55 NTHL1 Endonuclease III-like protein 1 yes no 3 0.00017608 96.82 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 10437000 1318900 1834400 1351800 655000 1481300 3795400 4803 636 4857 21453;21454;21455;21456;21457;21458 14224;14225;14226 14226 3 LRVCEVCSAYLGLHDNDRR ASSFQQQKLRVCEVCS GLHDNDRRLADHFGGK K L R R R L 1 3 1 2 2 0 1 1 1 0 3 0 0 0 0 1 0 0 1 2 0 19 2 2332.1165 B7Z500;Q9Y383-2;Q9Y383;B7Z4Q3 B7Z500 184 202 LUC7L2;C7orf55 Putative RNA-binding protein Luc7-like 2;UPF0562 protein C7orf55 no no 4 0.00052021 64.454 By matching By matching By matching By matching By matching By MS/MS 1 1 6184900 0 0 0 454690 0 5730200 4804 186 4858 21459;21460 14227 14227 1 LRVLLQEEGTRK EKEYEIERLRVLLQEE LQEEGTRKREYENELA R L R R K R 0 2 0 0 0 1 2 1 0 0 3 1 0 0 0 0 1 0 0 1 0 12 2 1440.8413 P15924;P15924-2 P15924 1174 1185 DSP Desmoplakin yes no 3 0.033867 58.274 By matching By matching By matching By MS/MS By matching By matching 1 658530 0 0 0 658530 0 0 4805 840 4859 21461 14228 14228 1 LSAEENPDDSEVPSSSGINSTK KSLQEKGKLSAEENPD SSGINSTKSQDKDVNE K L S T K S 1 0 2 2 0 0 3 1 0 1 1 1 0 0 2 6 1 0 0 1 0 22 0 2262.0135 Q9Y5Q9-2;Q9Y5Q9 Q9Y5Q9-2 42 63 GTF3C3 General transcription factor 3C polypeptide 3 yes no 2 9.4282E-06 61.276 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 7505300 0 2532100 1347200 0 1157200 2468700 4806 1656 4860 21462;21463;21464;21465 14229 14229 1 LSALAEAK ESPPPRPKLSALAEAK LSALAEAKKLAAITKL K L S A K K 3 0 0 0 0 0 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 8 0 801.45962 Q5T670;Q7L590-2;Q7L590 Q5T670 650 657 MCM10 Protein MCM10 homolog yes no 2 0.034579 69.812 By matching By matching By MS/MS By matching By matching By matching 1 1 1002700 223010 0 779640 0 0 0 4807 1193 4861 21466;21467 14230 14230 1 LSASGEDSTIPQASR LDLQSPTKLSASGEDS STIPQASRLNNIVNRS K L S S R L 2 1 0 1 0 1 1 1 0 1 1 0 0 0 1 4 1 0 0 0 0 15 0 1517.7322 P41182-2;P41182 P41182-2 431 445 BCL6 B-cell lymphoma 6 protein yes no 2 0.0043674 54.402 By matching By matching By matching By matching By MS/MS By matching 1 1 1028700 0 0 0 0 529020 499630 4808 911 4862 21468;21469 14231 14231 1 LSASGEDSTIPQASRLNNIVNR LDLQSPTKLSASGEDS RLNNIVNRSMTGSPRS K L S N R S 2 2 3 1 0 1 1 1 0 2 2 0 0 0 1 4 1 0 0 1 0 22 1 2341.1986 P41182-2;P41182 P41182-2 431 452 BCL6 B-cell lymphoma 6 protein yes no 3 5.4763E-05 75.743 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 7384600 0 0 0 7384600 0 0 4809 911 4863 21470;21471 14232;14233 14232 1 LSASTASELSPKSK LPASPRARLSASTASE SELSPKSKARPSSPST R L S S K A 2 0 0 0 0 0 1 0 0 0 2 2 0 0 1 5 1 0 0 0 0 14 1 1404.746 Q3KQU3-2;Q3KQU3-4;Q3KQU3;H0YF21 Q3KQU3-2 414 427 MAP7D1 MAP7 domain-containing protein 1 yes no 3 0.019197 45.722 By matching By matching By matching By matching By matching By MS/MS 1 1 1068200 262080 0 0 0 0 806070 4810 1165 4864 21472;21473 14234 14234 1 LSCMANSVIK QLFEMHEKLSCMANSV CMANSVIKNLQSRWRS K L S I K N 1 0 1 0 1 0 0 0 0 1 1 1 1 0 0 2 0 0 0 1 0 10 0 1121.5573 Q5UIP0-2;Q5UIP0;H7C2B5 Q5UIP0-2 2422 2431 RIF1 Telomere-associated protein RIF1 yes no 2 6.2851E-09 114.89 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 15498000 1793800 4193000 0 1937200 609110 6965400 4811 1201 4865 21474;21475;21476;21477;21478;21479 14235;14236;14237;14238;14239 14236 5 LSCSCISWNPSSSR LQHEISCKLSCSCISW SWNPSSSRAHSPMIAV K L S S R A 0 1 1 0 2 0 0 0 0 1 1 0 0 0 1 6 0 1 0 0 0 14 0 1639.7083 Q96EE3;Q96EE3-1 Q96EE3 163 176 SEH1L Nucleoporin SEH1 yes no 2 0.01738 46.318 By matching By matching By matching By matching By matching By MS/MS 1 534080 0 0 0 0 0 534080 4812 1380 4866 21480 14240 14240 1 LSCSTWNYQK IIACHQGKLSCSTWNY CSTWNYQKSTIGAYFL K L S Q K S 0 0 1 0 1 1 0 0 0 0 1 1 0 0 0 2 1 1 1 0 0 10 0 1285.5761 Q8NI36;D6R922 Q8NI36 468 477 WDR36 WD repeat-containing protein 36 yes no 2 0.0018419 102.95 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 34118000 2062200 4943600 9561100 2695500 5723800 9132100 4813 1331 4867 21481;21482;21483;21484;21485;21486 14241;14242;14243;14244;14245 14243 5 LSDLQKEAEK DLVAIEAKLSDLQKEA DLQKEAEKLESEHPDQ K L S E K L 1 0 0 1 0 1 2 0 0 0 2 2 0 0 0 1 0 0 0 0 0 10 1 1159.6085 Q01082-3;Q01082-2;Q01082 Q01082-3 999 1008 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.010951 88.134 By matching By matching By matching By matching By MS/MS By matching 1 17271000 0 0 0 0 17271000 0 4814 1025 4868 21487 14246 14246 1 LSDLSTEDDDSGHCK EKLVSVMRLSDLSTED DDDSGHCKMNRYDKKI R L S C K M 0 0 0 4 1 0 1 1 1 0 2 1 0 0 0 3 1 0 0 0 0 15 0 1677.6788 Q5BJF6-8;Q5BJF6-5;Q5BJF6-6;B4DX73;Q5BJF6-7;Q5BJF6-2;Q5BJF6-3;Q5BJF6-4;Q5BJF6;Q5T4C2;Q5T4C8;Q5T4C7 Q5BJF6-8 86 100 ODF2 Outer dense fiber protein 2 yes no 3 4.5367E-06 83.877 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 4007700 253530 630110 702570 460210 610840 1350500 4815 137 4869 21488;21489;21490;21491;21492;21493 14247;14248;14249 14247 2 LSDNFQDSEQLVEK SVHILDEKLSDNFQDS DSEQLVEKIWYRVIDD K L S E K I 0 0 1 2 0 2 2 0 0 0 2 1 0 1 0 2 0 0 0 1 0 14 0 1650.7737 C9J5X9;Q8NB91 C9J5X9 464 477 FANCB Fanconi anemia group B protein yes no 2 3.123E-29 108.66 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 4816 230 4870 21494 14250 14250 1 LSDNPAWEGDKGNTK IKNVTELKLSDNPAWE EGDKGNTKGDKHDDLQ K L S T K G 1 0 2 2 0 0 1 2 0 0 1 2 0 0 1 1 1 1 0 0 0 15 1 1630.7587 Q9BY42;A8MSH5;A2A2L5;A2A2L6 Q9BY42 93 107 RTFDC1 Protein RTF2 homolog yes no 2;3 2.0497E-05 89.747 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 1 2 23038000 1410100 3437800 3812700 1079900 3573900 9723700 4817 38 4871 21495;21496;21497;21498;21499;21500;21501;21502;21503 14251;14252;14253;14254;14255 14251 5 LSDSNKENALHSYSTQK TSAPDVTKLSDSNKEN LHSYSTQKGPLKAGEQ K L S Q K G 1 0 2 1 0 1 1 0 1 0 2 2 0 0 0 4 1 0 1 0 0 17 1 1920.9177 H0Y5J9;F2Z2W0;Q9H2D6-5;F8W6V6;Q9H2D6-3;Q9H2D6-2;Q9H2D6;F6WYE2;F6TR96 H0Y5J9 138 154 TRIOBP TRIO and F-actin-binding protein yes no 4 0.033931 37.182 By matching By matching By matching By matching By MS/MS By matching 1 1 1 2424700 0 449760 0 0 1073900 901080 4818 477 4872 21504;21505;21506 14256 14256 1 LSDVDANTAIK TTNSGYTRLSDVDANT VDANTAIKHEEQSNED R L S I K H 2 0 1 2 0 0 0 0 0 1 1 1 0 0 0 1 1 0 0 1 0 11 0 1145.5928 Q12888;Q12888-2;A6NNK5;F8VY86;C9JXV0 Q12888 207 217 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.0022504 88.338 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 6003300 0 1189200 642380 337840 1099600 2734300 4819 1063 4873 21507;21508;21509;21510;21511 14257 14257 1 LSDVDANTAIKHEEQSNEDIPIAEQSSK TTNSGYTRLSDVDANT PIAEQSSKDIPVTAQP R L S S K D 3 0 2 3 0 2 4 0 1 3 1 2 0 0 1 4 1 0 0 1 0 28 1 3067.4582 Q12888;Q12888-2;A6NNK5;F8VY86;C9JXV0 Q12888 207 234 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3;4 0.0034771 35.23 By matching By MS/MS By matching By MS/MS By matching By matching 2 1 6031900 0 4380500 0 1651400 0 0 4820 1063 4874 21512;21513;21514 14258;14259;14260 14259 3 LSEEAECPNPSTPSK REQEMFFKLSEEAECP PNPSTPSKAAKFFPYS K L S S K A 1 0 1 0 1 0 3 0 0 0 1 1 0 0 3 3 1 0 0 0 0 15 0 1644.7301 O94804 O94804 941 955 STK10 Serine/threonine-protein kinase 10 yes yes 2 0.016146 44.312 By matching By matching By matching By matching By matching By MS/MS 1 540030 0 0 0 0 0 540030 4821 756 4875 21515 14261 14261 1 LSEIVREFK RIKNEKSKLSEIVREF SEIVREFKTTNRLLLT K L S F K T 0 1 0 0 0 0 2 0 0 1 1 1 0 1 0 1 0 0 0 1 0 9 1 1119.6288 F5GZI1;O60264;F6TQG2;P28370-2;P28370 F5GZI1 263 271 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 yes no 2 0.03517 79.489 By matching By matching By matching By matching By matching By MS/MS 1 907690 0 0 0 0 0 907690 4822 500 4876 21516 14262;14263 14263 2 LSEVEEAQEASMETDPKP QTLENDEKLSEVEEAQ SMETDPKP________ K L S K P - 2 0 0 1 0 1 5 0 0 0 1 1 1 0 2 2 1 0 0 1 0 18 1 1988.8885 Q6I9Y2 Q6I9Y2 187 204 THOC7 THO complex subunit 7 homolog yes yes 2 0 195.25 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 5099200 4056200 0 0 0 0 1042900 4823 1221 4877 21517;21518 14264;14265;14266 14265 2 LSEVQASEAEMR QRAEMLQKLSEVQASE QASEAEMRLFYTTSKL K L S M R L 2 1 0 0 0 1 3 0 0 0 1 0 1 0 0 2 0 0 0 1 0 12 0 1348.6293 Q8IY37 Q8IY37 100 111 DHX37 Probable ATP-dependent RNA helicase DHX37 yes yes 2 0.012922 56.569 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2307700 176790 568100 0 0 320140 1242700 4824 1288 4878 21519;21520;21521;21522 14267 14267 1 LSFNPTQLEEQCHI KALPMHIRLSFNPTQL QLEEQCHI________ R L S H I - 0 0 1 0 1 2 2 0 1 1 2 0 0 1 1 1 1 0 0 0 0 14 0 1714.7985 CON__P02754 CON__P02754 149 162 yes yes 2 0 217.68 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1365100000 24454000 0 0 0 1340700000 0 + 4825 292 4879 21523;21524 14268;14269 14268 2 LSFQCCECGK PLENGKAKLSFQCCEC FQCCECGKAFQRHDHL K L S G K A 0 0 0 0 3 1 1 1 0 0 1 1 0 1 0 1 0 0 0 0 0 10 0 1287.5046 Q96IT1;Q96IT1-2 Q96IT1 520 529 ZNF496 Zinc finger protein 496 yes no 2 0.010835 72.289 By matching By matching By matching By matching By matching By MS/MS 1 632860 0 0 0 0 0 632860 4826 1397 4880 21525 14270 14270 1 LSFYETGEIPRK LREQVEERLSFYETGE ETGEIPRKNLDVMKEA R L S R K N 0 1 0 0 0 0 2 1 0 1 1 1 0 1 1 1 1 0 1 0 0 12 1 1438.7456 O00567;H0YDU4;H0Y653;E9PDI8 O00567 405 416 NOP56 Nucleolar protein 56 yes no 3 0.0012603 74.611 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 4847000 0 1230900 0 0 0 3616000 4827 692 4881 21526;21527 14271;14272 14271 2 LSGDQPAARTPR GWESRKRKLSGDQPAA QPAARTPRSKKKKKLG K L S P R S 2 2 0 1 0 1 0 1 0 0 1 0 0 0 2 1 1 0 0 0 0 12 1 1267.6633 Q13428-7;E7ETY2;Q13428-6;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 1350 1361 TCOF1 Treacle protein no no 3 0.013201 56.548 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 23029000 4664500 1967700 2253100 2307800 7958300 3877300 4828 1082;383 4882 21528;21529;21530;21531;21532;21533 14273 14273 1 LSGGPLANGENSNLSR TKGAPETKLSGGPLAN GENSNLSRTKSSDTSS K L S S R T 1 1 3 0 0 0 1 3 0 0 3 0 0 0 1 3 0 0 0 0 0 16 0 1584.7856 Q5VUA4 Q5VUA4 1591 1606 ZNF318 Zinc finger protein 318 yes yes 2 0.037654 72.797 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 4829 1205 4883 21534 14274 14274 1 LSGKPQNAPEGYQNRLK VEEAKILRLSGKPQNA EGYQNRLKVLYSQKAT R L S L K V 1 1 2 0 0 2 1 2 0 0 2 2 0 0 2 1 0 0 1 0 0 17 2 1898.9963 B4E1H5;Q12834 B4E1H5 109 125 CDC20 Cell division cycle protein 20 homolog yes no 4 0.0020881 67.326 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 6330600 713720 1039100 1145200 906690 0 2525900 4830 157 4884 21535;21536;21537;21538;21539 14275;14276;14277;14278 14275 4 LSGLEQPQGALQTR LEAAAKRKLSGLEQPQ PQGALQTRRRKKKRPG K L S T R R 1 1 0 0 0 3 1 2 0 0 3 0 0 0 1 1 1 0 0 0 0 14 0 1496.7947 H0YFP2;E9PS41;Q6RFH5-2;Q6RFH5 H0YFP2 13 26 WDR74 WD repeat-containing protein 74 yes no 2 6.8747E-42 121.92 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 9451300 1823600 672660 682050 1563500 1856400 2853100 4831 470 4885 21540;21541;21542;21543;21544;21545 14279;14280;14281;14282 14279 3 LSHEDDHILEDAGSSDISSDAACTNPNK QDSKETVKLSHEDDHI AACTNPNKTENSLVGL K L S N K T 3 0 2 5 1 0 2 1 2 2 2 1 0 0 1 5 1 0 0 0 0 28 0 2997.2894 Q92576-2;Q92576;E7EVH3;E9PE34;B3KP41;D6R9X2 Q92576-2 240 267 PHF3 PHD finger protein 3 yes no 4 2.3726E-19 73.649 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 9635700 2755500 2093500 0 0 0 4786700 4832 1353 4886 21546;21547;21548 14283;14284;14285 14285 3 LSHSDEKPFECPICNQR VYHLNRHKLSHSDEKP ECPICNQRFKRKDRMT K L S Q R F 0 1 1 1 2 1 2 0 1 1 1 1 0 1 2 2 0 0 0 0 0 17 1 2115.9466 Q14119 Q14119 194 210 VEZF1 Vascular endothelial zinc finger 1 yes yes 3;4 1.6432E-07 89.911 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 205960000 35755000 23806000 9885500 30967000 58234000 47312000 4833 1094 4887 21549;21550;21551;21552;21553;21554;21555;21556;21557;21558;21559;21560 14286;14287;14288;14289;14290;14291;14292;14293;14294;14295;14296 14287 11 LSHSDEKPFECPICNQRFK VYHLNRHKLSHSDEKP PICNQRFKRKDRMTYH K L S F K R 0 1 1 1 2 1 2 0 1 1 1 2 0 2 2 2 0 0 0 0 0 19 2 2391.11 Q14119 Q14119 194 212 VEZF1 Vascular endothelial zinc finger 1 yes yes 4;5 5.822E-06 84.195 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 56156000 4352300 6752000 8789800 11455000 12560000 12247000 4834 1094 4888 21561;21562;21563;21564;21565;21566;21567;21568;21569;21570;21571 14297;14298;14299;14300;14301;14302;14303 14299 7 LSHSDEKPYQCPVCQQR VYHLNRHKLSHSDEKP QCPVCQQRFKRKDRMS K L S Q R F 0 1 0 1 2 3 1 0 1 0 1 1 0 0 2 2 0 0 1 1 0 17 1 2130.9575 C6G496;P56270;G5E927;I3L2Z5;F5H7A6 C6G496 276 292 MAZ Myc-associated zinc finger protein yes no 3;4 1.6081E-07 89.911 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 3 206410000 10235000 19136000 27810000 21274000 72455000 55500000 4835 219 4889 21572;21573;21574;21575;21576;21577;21578;21579;21580;21581;21582;21583 14304;14305;14306;14307;14308;14309;14310;14311;14312 14311 9 LSHSDEKPYQCPVCQQRFK VYHLNRHKLSHSDEKP PVCQQRFKRKDRMSYH K L S F K R 0 1 0 1 2 3 1 0 1 0 1 2 0 1 2 2 0 0 1 1 0 19 2 2406.1209 C6G496;P56270;G5E927;I3L2Z5;F5H7A6 C6G496 276 294 MAZ Myc-associated zinc finger protein yes no 3;4;5 0.00029198 80.361 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 3 3 2 78888000 19885000 7660100 8343500 16148000 16539000 10311000 4836 219 4890 21584;21585;21586;21587;21588;21589;21590;21591;21592;21593;21594;21595;21596;21597;21598;21599 14313;14314;14315;14316;14317;14318;14319;14320 14320 8 LSHSGEKPYSCPVCGLR VYHLNRHKLSHSGEKP SCPVCGLRFKRKDRMS K L S L R F 0 1 0 0 2 0 1 2 1 0 2 1 0 0 2 3 0 0 1 1 0 17 1 1945.9139 Q9HBE1-3;Q9HBE1;Q9HBE1-2;Q9HBE1-4 Q9HBE1-3 375 391 PATZ1 POZ-, AT hook-, and zinc finger-containing protein 1 yes no 4 0.030744 42.314 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 10642000 903570 615380 1093900 0 2736200 5293100 4837 1517 4891 21600;21601;21602;21603;21604 14321;14322 14321 0 LSIGQQNGGLRSEK QKNPENSKLSIGQQNG NGGLRSEKSIASLQEM K L S E K S 0 1 1 0 0 2 1 3 0 1 2 1 0 0 0 2 0 0 0 0 0 14 1 1485.79 H0YET3;Q14207 H0YET3 185 198 NPAT Protein NPAT yes no 3 0.0078671 52.821 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 7524800 933240 1066000 2295500 914610 924610 1390900 4838 618 4892 21605;21606;21607;21608;21609;21610 14323;14324 14324 2 LSIVPVRR RGAIILAKLSIVPVRR LSIVPVRRGYWGNKIG K L S R R G 0 2 0 0 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 2 0 8 1 938.60253 P15880;H0YEN5;E9PMM9;I3L404;E9PM36;E9PPT0 P15880 160 167 RPS2 40S ribosomal protein S2 yes no 2 0.0002149 116.37 By MS/MS By matching By matching By matching By matching By matching 1 2268800 2268800 0 0 0 0 0 4839 839 4893 21611 14325 14325 1 LSLALSPR NQSRLFLRLSLALSPR LSLALSPRLECSGAIS R L S P R L 1 1 0 0 0 0 0 0 0 0 3 0 0 0 1 2 0 0 0 0 0 8 0 855.5178 H0YIQ6;H0YHU6 H0YIQ6 63 70 yes no 1;2 0.0024577 110.81 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 1 1 2 2 7929600000 1663500000 1113400000 1029500000 1455700000 641950000 2025600000 4840 622 4894 21612;21613;21614;21615;21616;21617;21618;21619;21620;21621 14326;14327;14328;14329;14330;14331;14332;14333;14334;14335;14336;14337;14338;14339 14327 14 LSLDDVQK KPVVVLQKLSLDDVQK LSLDDVQKLIKDREDK K L S Q K L 0 0 0 2 0 1 0 0 0 0 2 1 0 0 0 1 0 0 0 1 0 8 0 916.48656 Q6KC79-2;Q6KC79;Q6KC79-3 Q6KC79-2 1008 1015 NIPBL Nipped-B-like protein yes no 2 0.019657 80.165 By MS/MS By matching By matching By matching By matching By MS/MS 2 1 1 1 1 1 24392000 6114700 6214800 2392100 1937400 3364600 4368800 4841 1222 4895 21622;21623;21624;21625;21626;21627;21628 14340;14341 14340 2 LSLEGDHSTPPSAYGSVK TVHEILCKLSLEGDHS PSAYGSVKAYTNFDAE K L S V K A 1 0 0 1 0 0 1 2 1 0 2 1 0 0 2 4 1 0 1 1 0 18 0 1843.8952 H0YKS4;H0YMD0;H0YMU9;H0YN42;P07355;H0YKV8;H0YKL9;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMM1;A6NMY6;P07355-2;H0YNB8;H0YMD9;H0YKN4;H0YMW4 H0YKS4 11 28 ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein yes no 3 0.00057178 79.347 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 25095000 3580000 9541500 6556300 2904800 2512400 0 4842 626 4896 21629;21630;21631;21632;21633;21634 14342;14343;14344;14345;14346;14347;14348 14348 7 LSLGTYASLHGR RCSYCNNKLSLGTYAS TYASLHGRIYCKPHFN K L S G R I 1 1 0 0 0 0 0 2 1 0 3 0 0 0 0 2 1 0 1 0 0 12 0 1273.6779 F8VQE1;Q9UHB6-2;B4DN52;Q9UHB6;Q9UHB6-4;F8VS07;Q9UHB6-3 F8VQE1 263 274 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.001509 80.871 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 5892500 4542300 0 0 0 0 1350200 4843 107 4897 21635;21636 14349;14350 14350 2 LSLITAPR PTRPLLTKLSLITAPR LSLITAPRRERGRPSL K L S P R R 1 1 0 0 0 0 0 0 0 1 2 0 0 0 1 1 1 0 0 0 0 8 0 869.53345 Q8IVT2 Q8IVT2 334 341 MISP Mitotic interactor and substrate of PLK1 yes yes 2 0.014111 89.355 By matching By matching By matching By matching By matching By MS/MS 1 1 1332800 0 0 0 161240 0 1171600 4844 1278 4898 21637;21638 14351 14351 1 LSLMYAR RFMRDQEKLSLMYARK KLSLMYARKGVAEQKR K L S A R K 1 1 0 0 0 0 0 0 0 0 2 0 1 0 0 1 0 0 1 0 0 7 0 852.45276 P78527;E7EUY0;P78527-2 P78527 2739 2745 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 5.9082E-44 143.37 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 75936000 7336300 6314800 14777000 13000000 2077400 32431000 4845 1012 4899 21639;21640;21641;21642;21643;21644 14352;14353;14354;14355;14356;14357 14354 6 LSLQESESK RSVNIASKLSLQESES SLQESESKRRCRKRQS K L S S K R 0 0 0 0 0 1 2 0 0 0 2 1 0 0 0 3 0 0 0 0 0 9 0 1019.5135 Q9NRL2-2;Q9NRL2;F5H239 Q9NRL2-2 1365 1373 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 2 0.0071717 89.029 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 4744300 492740 618010 1602600 0 770160 1260800 4846 1536 4900 21645;21646;21647;21648;21649 14358;14359;14360 14358 3 LSLQQPR TQPHAATRLSLQQPRA RLSLQQPRAELPGQPE R L S P R A 0 1 0 0 0 2 0 0 0 0 2 0 0 0 1 1 0 0 0 0 0 7 0 840.48175 Q92766-3;Q92766;Q92766-2;C9JU34 Q92766-3 577 583 RREB1 Ras-responsive element-binding protein 1 yes no 2 0.020995 88.029 By matching By matching By matching By matching By matching By MS/MS 1 1327700 0 0 0 0 0 1327700 4847 1357 4901 21650 14361 14361 1 LSLSEGKVKK NSGDEKRKLSLSEGKV LSEGKVKKNMGEGKKR K L S K K N 0 0 0 0 0 0 1 1 0 0 2 3 0 0 0 2 0 0 0 1 0 10 2 1087.6601 Q49A26-2;Q49A26;Q49A26-3;Q49A26-4 Q49A26-2 129 138 GLYR1 Putative oxidoreductase GLYR1 yes no 2 2.0552E-34 136.49 By matching By matching By MS/MS By matching By matching By matching 1 1 1 2464300 353950 639830 1470500 0 0 0 4848 1168 4902 21651;21652;21653 14362 14362 1 LSLVIRSPSLLQSGAKK ALARKKARLSLVIRSP LLQSGAKKKAQTLRFT R L S K K K 1 1 0 0 0 1 0 1 0 1 4 2 0 0 1 4 0 0 0 1 0 17 2 1796.0884 I3L1L3;Q9BQG0;Q9BQG0-2;I3L2H8 I3L1L3 1222 1238 MYBBP1A Myb-binding protein 1A yes no 3;4 1.477E-158 145.79 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 2 1 1 1 138910000 91632000 27493000 0 9252500 0 10535000 4849 682 4903 21654;21655;21656;21657;21658 14363;14364;14365;14366;14367 14367 5 LSNITPNIK AAPHMRIRLSNITPNI SNITPNIKRICDKKTQ R L S I K R 0 0 2 0 0 0 0 0 0 2 1 1 0 0 1 1 1 0 0 0 0 9 0 998.57605 Q49AG3 Q49AG3 672 680 ZBED5 Zinc finger BED domain-containing protein 5 yes yes 2 0.03657 61.56 By matching By matching By matching By matching By matching By MS/MS 1 1087000 0 0 0 0 0 1087000 4850 1170 4904 21659 14368 14368 1 LSNNPQLSCSSSLIK SQTNPVVKLSNNPQLS SCSSSLIKTSDKPLMY K L S I K T 0 0 2 0 1 1 0 0 0 1 3 1 0 0 1 5 0 0 0 0 0 15 0 1646.8298 Q6ZU65 Q6ZU65 958 972 UBN2 Ubinuclein-2 yes yes 2 1.686E-08 97.823 By MS/MS By matching By matching By matching By matching By matching 1 1 2164400 1951300 0 0 213100 0 0 4851 1241 4905 21660;21661 14369 14369 1 LSNVEASKENVSQPK IETMSSSKLSNVEASK KENVSQPKRAKRKLYT K L S P K R 1 0 2 0 0 1 2 0 0 0 1 2 0 0 1 3 0 0 0 2 0 15 1 1628.837 Q96Q89-5;Q96Q89-3;Q96Q89;C9J6W2;Q96Q89-2 Q96Q89-5 452 466 KIF20B Kinesin-like protein KIF20B yes no 3 0.00080122 78.505 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 3301300 932410 0 0 1205300 1163600 0 4852 232 4906 21662;21663;21664 14370;14371;14372;14373 14371 4 LSPGTDSSSNLGGVKLEGK PALQGSSRLSPGTDSS GGVKLEGKKSPLSSIL R L S G K K 0 0 1 1 0 0 1 4 0 0 3 2 0 0 1 4 1 0 0 1 0 19 1 1844.948 I3L4J3;Q7Z3B3;C9JHY2 I3L4J3 248 266 KANSL1 KAT8 regulatory NSL complex subunit 1 yes no 3 0.008343 42.633 By matching By MS/MS By matching By matching By matching By matching 1 1 1 3169700 0 928860 1019100 0 0 1221700 4853 247 4907 21665;21666;21667 14374 14374 1 LSPSPTTEDPRVR PTQSEEEKLSPSPTTE TTEDPRVRSHVSRQAM K L S V R S 0 2 0 1 0 0 1 0 0 0 1 0 0 0 3 2 2 0 0 1 0 13 1 1453.7525 E7EQY4;Q9BTC8-2;D6W5A2;F8W8M8;E7EV10;Q9BTC8 E7EQY4 426 438 MTA3 Metastasis-associated protein MTA3 yes no 2;3 0.0051594 61.235 By matching By matching By MS/MS By matching By matching By MS/MS 1 2 2 2 1 2 58924000 618980 12766000 19535000 1778800 1619700 22605000 4854 331 4908 21668;21669;21670;21671;21672;21673;21674;21675;21676;21677 14375;14376;14377 14376 3 LSQKELLGPPEAK PHALGPVKLSQKELLG LLGPPEAKRARGPEEE K L S A K R 1 0 0 0 0 1 2 1 0 0 3 2 0 0 2 1 0 0 0 0 0 13 1 1408.7926 Q14807;B7Z265;H3BRB3 Q14807 388 400 KIF22 Kinesin-like protein KIF22 yes no 3 0.020966 48.214 By matching By matching By MS/MS By matching By matching By matching 1 2568900 0 0 2568900 0 0 0 4855 1115 4909 21678 14378 14378 1 LSQKFPK LKAWSVARLSQKFPKA RLSQKFPKAEFVEVTK R L S P K A 0 0 0 0 0 1 0 0 0 0 1 2 0 1 1 1 0 0 0 0 0 7 1 846.49634 CON__P02769 CON__P02769 242 248 yes yes 2 1.2367E-06 119.56 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 41051000 4478100 10500000 23342000 0 2731500 0 + 4856 294 4910 21679;21680;21681;21682 14379;14380 14380 2 LSQLEEHLSQLQDNPPQEK KNEILQGKLSQLEEHL QDNPPQEKGEVLGDVL K L S E K G 0 0 1 1 0 4 3 0 1 0 4 1 0 0 2 2 0 0 0 0 0 19 0 2232.1022 Q14980-2;Q14980;Q9BTE9;F5H4J1;F5H6Y5 Q14980-2 387 405 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 2.5551E-17 97.713 By matching By MS/MS By matching By matching By matching By matching 1 1 34077000 0 31366000 0 2711100 0 0 4857 1121 4911 21683;21684 14381 14381 1 LSQLQVEAAR DTTELRKKLSQLQVEA QLQVEAARLGILPVGR K L S A R L 2 1 0 0 0 2 1 0 0 0 2 0 0 0 0 1 0 0 0 1 0 10 0 1113.6142 Q9P2N5 Q9P2N5 926 935 RBM27 RNA-binding protein 27 yes yes 2 3.3316E-15 121.61 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 5636600 557590 0 0 0 1133900 3945100 4858 1579 4912 21685;21686;21687 14382;14383 14382 2 LSQPPLEQTQLQVK SQSAKQQKLSQPPLEQ EQTQLQVKTLQCFQTK K L S V K T 0 0 0 0 0 4 1 0 0 0 3 1 0 0 2 1 1 0 0 1 0 14 0 1607.8883 Q7Z589-2;E9PMC9;Q7Z589;Q17RM7;B7ZKU2;B7ZKU0;B7ZKT8;F5H2F0;H0YET8 Q7Z589-2 954 967 EMSY;C11orf30 Protein EMSY yes no 2 0.0025764 63.16 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 6774600 3579400 0 0 0 0 3195200 4859 208 4913 21688;21689 14384;14385 14384 2 LSQTPHSQPPRPGTCK LCIPSPARLSQTPHSQ PPRPGTCKTSVATQCD R L S C K T 0 1 0 0 1 2 0 1 1 0 1 1 0 0 4 2 2 0 0 0 0 16 1 1789.8894 F5H082;Q9UER7 F5H082 631 646 DAXX Death domain-associated protein 6 yes no 3;4 0.0054703 49.595 By matching By matching By MS/MS By matching By matching By MS/MS 1 2 2 2 1 2 6862300 517790 1138200 1409600 591780 400020 2804900 4860 503 4914 21690;21691;21692;21693;21694;21695;21696;21697;21698;21699 14386;14387;14388 14387 3 LSQTPTHMPTILDDPGK PSGSPSPKLSQTPTHM TILDDPGKKVKKPAPP K L S G K K 0 0 0 2 0 1 0 1 1 1 2 1 1 0 3 1 3 0 0 0 0 17 0 1849.9244 Q9P275;Q9P275-2;E9PEW0;F5H3B9 Q9P275 518 534 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 3 4.1332E-110 140.3 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 154550000 31119000 16785000 25224000 18294000 7851400 55273000 4861 1576 4915 21700;21701;21702;21703;21704;21705 14389;14390;14391;14392;14393;14394;14395 14395 7 LSRAELYKEPTNEELNR KGLLQPVKLSRAELYK PTNEELNRLRETEILF K L S N R L 1 2 2 0 0 0 4 0 0 0 3 1 0 0 1 1 1 0 1 0 0 17 2 2061.0491 Q9H6R4-4;Q9H6R4;Q9H6R4-2;G8JLK7;Q9H6R4-3 Q9H6R4-4 55 71 NOL6 Nucleolar protein 6 yes no 4 0.0014755 58.461 By matching By MS/MS By matching By matching By matching By matching 1 1 1 4610500 0 1849300 1270500 0 0 1490700 4862 1497 4916 21706;21707;21708 14396 14396 1 LSRGLSEAAGQTAQMLER SLVEENEKLSRGLSEA QTAQMLERIILTEQAN K L S E R I 3 2 0 0 0 2 2 2 0 0 3 0 1 0 0 2 1 0 0 0 0 18 1 1916.9738 O95239;O95239-2 O95239 402 419 KIF4A Chromosome-associated kinesin KIF4A yes no 3 0.00078629 80.382 By matching By MS/MS By matching By matching By matching By matching 1 6252400 0 6252400 0 0 0 0 4863 768 4917 21709 14397 14397 1 LSRGSVINQNDLAK LNPELNDKLSRGSVIN INQNDLAKSSEGETMT K L S A K S 1 1 2 1 0 1 0 1 0 1 2 1 0 0 0 2 0 0 0 1 0 14 1 1513.8213 Q9UHF7;Q9UHF7-3;Q9UHF7-2;E5RJ97 Q9UHF7 475 488 TRPS1 Zinc finger transcription factor Trps1 yes no 3 0.015282 47.301 By matching By MS/MS By matching By matching By matching By matching 1 1764400 0 1764400 0 0 0 0 4864 1594 4918 21710 14398 14398 1 LSRLATNTSAPDLKNVR KPSSTTPRLSRLATNT APDLKNVRSKVGSTEN R L S V R S 2 2 2 1 0 0 0 0 0 0 3 1 0 0 1 2 2 0 0 1 0 17 2 1855.0276 E7EVA0;P27816-6;P27816;P27816-2;P27816-4;E9PGM5;P27816-5;B9ZVR1;H0Y2V1;B4DSQ1;F8W9U4;H7C4C5;B5MEG9 E7EVA0 2065 2081 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 4 0.019118 39.585 By MS/MS By matching By matching By matching By matching By matching 1 1 1 3611900 1823600 0 775690 0 0 1012600 4865 388 4919 21711;21712;21713 14399 14399 1 LSSAVVFGGGEAR LNAKQHKKLSSAVVFG VFGGGEARLITEENEE K L S A R L 2 1 0 0 0 0 1 3 0 0 1 0 0 1 0 2 0 0 0 2 0 13 0 1248.6463 O60934;F5H3R2 O60934 238 250 NBN Nibrin yes no 2 0.01747 50.108 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 11332000 308430 0 6174900 3378600 0 1470100 4866 736 4920 21714;21715;21716;21717 14400 14400 1 LSSEHYSSQSHGNSMTELKPSSK GQESMEPKLSSEHYSS TELKPSSKAHLTKLKI K L S S K A 0 0 1 0 0 1 2 1 2 0 2 2 1 0 1 8 1 0 1 0 0 23 1 2520.1551 Q9UHB7;Q9UHB7-2;Q9UHB7-3 Q9UHB7 270 292 AFF4 AF4/FMR2 family member 4 yes no 4 0.0026043 49.528 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 7540000 1167800 0 911400 1350800 1671500 2438500 4867 1592 4921 21718;21719;21720;21721;21722 14401;14402 14401 2 LSSEMNTSTVNSAR HAKLENARLSSEMNTS TSTVNSAREELMESRM R L S A R E 1 1 2 0 0 0 1 0 0 0 1 0 1 0 0 4 2 0 0 1 0 14 0 1495.6937 E9PBF6;P20700 E9PBF6 277 290 LMNB1 Lamin-B1 yes no 2 0.0025478 63.29 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1760600 0 572810 0 171170 0 1016600 4868 406 4922 21723;21724;21725 14403 14403 1 LSSMDPAMLER QKLSPLQKLSSMDPAM MDPAMLERLLSLDRLL K L S E R L 1 1 0 1 0 0 1 0 0 0 2 0 2 0 1 2 0 0 0 0 0 11 0 1248.5842 Q14807;B7Z265;H3BRB3 Q14807 432 442 KIF22 Kinesin-like protein KIF22 yes no 2 2.3236E-70 148.28 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 39436000 0 1243300 0 4331300 0 33861000 4869 1115 4923 21726;21727;21728 14404;14405 14405 2 LSSPATLNSR DNDIMLIKLSSPATLN SPATLNSRVATVSLPR K L S S R V 1 1 1 0 0 0 0 0 0 0 2 0 0 0 1 3 1 0 0 0 0 10 0 1044.5564 CON__P00761 CON__P00761 98 107 yes yes 2 0.0026794 99.788 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 2308900000 468400000 500190000 320520000 315030000 280800000 424010000 + 4870 284 4924 21729;21730;21731;21732;21733;21734;21735 14406;14407;14408;14409;14410;14411;14412 14410 7 LSSSMYSSQGSSGSSQSK SEGSSSSKLSSSMYSS SSGSSQSKNSSQSGGK K L S S K N 0 0 0 0 0 2 0 2 0 0 1 1 1 0 0 10 0 0 1 0 0 18 0 1793.7738 Q15648 Q15648 1127 1144 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 2 0.0035825 49.395 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 4519300 0 615680 2036400 558790 0 1308500 4871 1143 4925 21736;21737;21738;21739 14413;14414 14413 2 LSSVDRHHSVEIK ECEVKKEKLSSVDRHH RHHSVEIKIEKTVIKK K L S I K I 0 1 0 1 0 0 1 0 2 1 1 1 0 0 0 3 0 0 0 2 0 13 1 1505.795 Q14151 Q14151 505 517 SAFB2 Scaffold attachment factor B2 yes yes 3 0.00047149 93.345 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 23191000 0 2291600 6004700 3739000 4869800 6286300 4872 1097 4926 21740;21741;21742;21743;21744 14415;14416;14417;14418 14416 4 LSSVDRHHSVEIKIEK ECEVKKEKLSSVDRHH SVEIKIEKTVIKKEEK K L S E K T 0 1 0 1 0 0 2 0 2 2 1 2 0 0 0 3 0 0 0 2 0 16 2 1876.0167 Q14151 Q14151 505 520 SAFB2 Scaffold attachment factor B2 yes yes 4 0.0018202 68.262 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 8031500 0 0 1557200 2490600 2109300 1874500 4873 1097 4927 21745;21746;21747;21748 14419;14420 14419 2 LSSVRGNHIISGTCASWRGK QTKVLTQKLSSVRGNH TCASWRGKSLRVQKIR K L S G K S 1 2 1 0 1 0 0 3 1 2 1 1 0 0 0 4 1 1 0 1 0 20 2 2185.1175 F6RIS4;Q9H3M7 F6RIS4 179 198 TXNIP Thioredoxin-interacting protein yes no 4;5 0.0060151 49.188 By matching By matching By matching By MS/MS By MS/MS By matching 2 2 6124600 0 0 0 3507200 2617400 0 4874 532 4928 21749;21750;21751;21752 14421;14422;14423 14422 3 LSTLLNHNNDTEEEER KNIQDGSKLSTLLNHN NDTEEEERLWRDLIME K L S E R L 0 1 3 1 0 0 4 0 1 0 3 0 0 0 0 1 2 0 0 0 0 16 0 1912.8763 Q6KC79-2;Q6KC79 Q6KC79-2 1279 1294 NIPBL Nipped-B-like protein yes no 3 0.013013 54.812 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 6789000 625600 1421600 598790 0 0 4143100 4875 1222 4929 21753;21754;21755;21756 14424;14425 14425 1 LSTQEGLVQELQK CVLELEERLSTQEGLV GLVQELQKKQVELQEE R L S Q K K 0 0 0 0 0 3 2 1 0 0 3 1 0 0 0 1 1 0 0 1 0 13 0 1471.7882 Q9BW19 Q9BW19 220 232 KIFC1 Kinesin-like protein KIFC1 yes yes 2 3.7971E-91 146.96 By matching By MS/MS By matching By matching By matching By matching 1 54012000 0 54012000 0 0 0 0 4876 1456 4930 21757 14426 14426 1 LSTQSNSNNIEPAR LNPKTWGRLSTQSNSN SNNIEPARTAGGSGLA R L S A R T 1 1 3 0 0 1 1 0 0 1 1 0 0 0 1 3 1 0 0 0 0 14 0 1529.7434 Q14CA3;Q14669;Q14CF1 Q14CA3 1101 1114 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 2 0.035597 40.211 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1872700 0 296030 0 0 573750 1002900 4877 1122 4931 21758;21759;21760 14427 14427 1 LSTQSNSNNIEPARTAGGSGLAR LNPKTWGRLSTQSNSN AGGSGLARAASKDTIS R L S A R A 3 2 3 0 0 1 1 3 0 1 2 0 0 0 1 4 2 0 0 0 0 23 1 2300.1469 Q14CA3;Q14669;Q14CF1 Q14CA3 1101 1123 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 3 0.00064861 53.453 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 25652000 380950 3069900 3261500 1633400 6615500 10691000 4878 1122 4932 21761;21762;21763;21764;21765;21766 14428;14429 14429 2 LSTSGNRPPANAETFSCNK RISMKMWKLSTSGNRP AETFSCNKIKDNDKED K L S N K I 2 1 3 0 1 0 1 1 0 0 1 1 0 1 2 3 2 0 0 0 0 19 1 2049.9538 A6NHR9;A6NHR9-2;A6NHR9-3 A6NHR9 1417 1435 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes no 3 0.016908 38.696 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 4403400 0 1286900 2035800 672990 407710 0 4879 23 4933 21767;21768;21769;21770 14430 14430 1 LSTVGWASQKK EEKPGGDKLSTVGWAS VGWASQKKKESRPGLV K L S K K K 1 0 0 0 0 1 0 1 0 0 1 2 0 0 0 2 1 1 0 1 0 11 1 1203.6612 F5GZ90;Q9NZJ0;E7ERQ0 F5GZ90 361 371 DTL Denticleless protein homolog yes no 3 0.015837 51.252 By matching By matching By matching By matching By matching By MS/MS 1 1390400 0 0 0 0 0 1390400 4880 499 4934 21771 14431 14431 1 LSVASTPISQRR TPVPPRGRLSVASTPI STPISQRRSQGRSCGP R L S R R S 1 2 0 0 0 1 0 0 0 1 1 0 0 0 1 3 1 0 0 1 0 12 1 1313.7415 Q9BXS6-2;Q9BXS6-3;Q9BXS6;E7ERR5;Q9BXS6-5;E9PB35;H0YMD2;Q9BXS6-4 Q9BXS6-2 238 249 NUSAP1 Nucleolar and spindle-associated protein 1 no no 3 0.0014005 73.499 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 9169100 755780 0 0 0 0 8413300 4881 1463;1464 4935 21772;21773 14432;14433;14434 14432 3 LSVIHRDVKPSNVLINK ALEHLHSKLSVIHRDV PSNVLINKEGHVKMCD K L S N K E 0 1 2 1 0 0 0 0 1 2 2 2 0 0 1 2 0 0 0 3 0 17 2 1931.1316 P46734;P46734-2;F8W9D9;P46734-3 P46734 184 200 MAP2K3 Dual specificity mitogen-activated protein kinase kinase 3 yes no 4 0.0031834 50.305 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 17244000 1361200 2011900 3160400 1595300 1116900 7998200 4882 925 4936 21774;21775;21776;21777;21778;21779 14435;14436 14435 2 LSVQSNPSPQLR QLSVQQNKLSVQSNPS SNPSPQLRSVMKVESS K L S L R S 0 1 1 0 0 2 0 0 0 0 2 0 0 0 2 3 0 0 0 1 0 12 0 1324.7099 B4DLG2;O75152;E9PQ61;E9PBY7 B4DLG2 71 82 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 0.0014474 91.093 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 36985000 0 5793300 4218800 3506500 12994000 10473000 4883 97 4937 21780;21781;21782;21783;21784 14437;14438;14439;14440 14438 4 LSVQSNPSPQLRSVMK QLSVQQNKLSVQSNPS PQLRSVMKVESSENVP K L S M K V 0 1 1 0 0 2 0 0 0 0 2 1 1 0 2 4 0 0 0 2 0 16 1 1769.9458 B4DLG2;O75152;E9PQ61;E9PBY7 B4DLG2 71 86 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 3 7.7941E-07 90.707 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 18361000 9557200 0 8804200 0 0 0 4884 97 4938 21785;21786 14441;14442 14442 2 LSVSGADTSVSSVDGPVSQK SVSDDRVKLSVSGADT VDGPVSQKAVQNENSY K L S Q K A 1 0 0 2 0 1 0 2 0 0 1 1 0 0 1 6 1 0 0 4 0 20 0 1918.9484 B4DY82;Q96HI0 B4DY82 413 432 SENP5 Sentrin-specific protease 5 yes no 2 0.0052672 45.347 By matching By matching By matching By matching By matching By MS/MS 1 1 2371900 0 833800 0 0 0 1538100 4885 142 4939 21787;21788 14443 14443 1 LTADPDSEIATTSLR SRALIKEKLTADPDSE EIATTSLRVSLMCPLG K L T L R V 2 1 0 2 0 0 1 0 0 1 2 0 0 0 1 2 3 0 0 0 0 15 0 1588.7944 B4DGW0;O75928-2;O75928;F8W7X5;H7BYT3;O75928-3;O75925;B3KSY9 B4DGW0 37 51 PIAS2;PIAS1 E3 SUMO-protein ligase PIAS2;E3 SUMO-protein ligase PIAS1 yes no 2 1.3264E-20 108.06 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 7895200 0 1303000 0 0 0 6592200 4886 89 4940 21789;21790 14444;14445;14446 14445 3 LTAERVEELKK VEDVIVRKLTAERVEE ERVEELKKVIKETQER K L T K K V 1 1 0 0 0 0 3 0 0 0 2 2 0 0 0 0 1 0 0 1 0 11 2 1314.7507 H7C128;H7C179;Q9H0E9-4;B5MCW3;H7C127;Q9H0E9-2;Q9H0E9;F8W820 H7C128 94 104 BRD8 Bromodomain-containing protein 8 yes no 3 0.030218 65.278 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 23010000 3285900 2291900 3477600 3371100 4913700 5669400 4887 171 4941 21791;21792;21793;21794;21795;21796 14447;14448 14448 2 LTAQVEELSK RFQEERQKLTAQVEEL AQVEELSKKLADSDQA K L T S K K 1 0 0 0 0 1 2 0 0 0 2 1 0 0 0 1 1 0 0 1 0 10 0 1116.6027 Q14980-2;F5H2L0;H0YFY6;H0YH75 Q14980-2 1533 1542 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 8.0232E-35 133.89 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 74004000 11546000 6833100 11677000 10289000 19085000 14574000 4888 1121 4942 21797;21798;21799;21800;21801;21802;21803 14449;14450;14451;14452;14453;14454;14455;14456 14454 8 LTATIWK EKQYFIEKLTATIWKN KLTATIWKNLSNPEMT K L T W K N 1 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 2 1 0 0 0 7 0 831.48544 O15226;G3V1N1 O15226 177 183 NKRF NF-kappa-B-repressing factor yes no 2 0.040677 81.784 By MS/MS By matching By matching By matching By matching By matching 1 2063400 2063400 0 0 0 0 0 4889 578 4943 21804 14457 14457 1 LTAVCMECFR PLAESVVKLTAVCMEC AVCMECFREAAYTKRL K L T F R E 1 1 0 0 2 0 1 0 0 0 1 0 1 1 0 0 1 0 0 1 0 10 0 1285.5617 P04183 P04183 149 158 TK1 Thymidine kinase, cytosolic yes yes 2 0.02 63.624 By matching By matching By matching By matching By MS/MS By matching 1 3814600 0 0 0 0 3814600 0 4890 787 4944 21805 14458 14458 1 LTAVCMECFREAAYTK PLAESVVKLTAVCMEC FREAAYTKRLGTEKEV K L T T K R 3 1 0 0 2 0 2 0 0 0 1 1 1 1 0 0 2 0 1 1 0 16 1 1948.8845 P04183 P04183 149 164 TK1 Thymidine kinase, cytosolic yes yes 3 0.002543 61.444 By matching By matching By matching By matching By matching By MS/MS 1 24287000 0 0 0 0 0 24287000 4891 787 4945 21806 14459 14459 1 LTCFELAPK CEEGDKLKLTCFELAP TCFELAPKSGNTGELR K L T P K S 1 0 0 0 1 0 1 0 0 0 2 1 0 1 1 0 1 0 0 0 0 9 0 1077.5529 Q16666-3;Q16666-2;Q16666;H3BLV7;E7EPR3 Q16666-3 623 631 IFI16 Gamma-interferon-inducible protein 16 yes no 2 9.0183E-30 135.71 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 12469000 0 1195100 0 1075000 5707300 4491900 4892 1155 4946 21807;21808;21809;21810 14460;14461;14462 14461 3 LTCFSVYCK YEALPQHKLTCFSVYC TCFSVYCKHGHLCPID K L T C K H 0 0 0 0 2 0 0 0 0 0 1 1 0 1 0 1 1 0 1 1 0 9 0 1176.5308 F5GX68 F5GX68 407 415 DNMT1 Cytosine-specific methyltransferase no no 2 4.3283E-12 123.21 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 48216000 0 8300500 10145000 4657600 1346500 23766000 4893 487 4947 21811;21812;21813;21814;21815 14463;14464;14465;14466;14467 14466 5 LTCLELIQNTHSQSCLK RIETLEQKLTCLELIQ THSQSCLKSFLERHGL K L T L K S 0 0 1 0 2 2 1 0 1 1 4 1 0 0 0 2 2 0 0 0 0 17 0 2044.0081 Q9BYW2;F2Z317;H7C3H4 Q9BYW2 1752 1768 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 3 0.0041551 47.217 By matching By MS/MS By matching By matching By matching By matching 1 1088500 0 1088500 0 0 0 0 4894 479 4948 21816 14468 14468 1 LTDCVVMRDPASK NYYEQWGKLTDCVVMR VMRDPASKRSRGFGFV K L T S K R 1 1 0 2 1 0 0 0 0 0 1 1 1 0 1 1 1 0 0 2 0 13 1 1490.7221 P22626;P22626-2 P22626 47 59 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2;3 0.0022752 70.54 By MS/MS By MS/MS By matching By MS/MS By matching By matching 2 2 2 2 1 1 24282000 4836900 7473400 2417900 3177300 1007800 5368500 4895 863 4949 21817;21818;21819;21820;21821;21822;21823;21824;21825;21826 14469;14470;14471;14472 14470 4 LTDLPTVVTK SAESSSSKLTDLPTVV DLPTVVTKNNQVMFPV K L T T K N 0 0 0 1 0 0 0 0 0 0 2 1 0 0 1 0 3 0 0 2 0 10 0 1085.6332 O75132 O75132 538 547 ZBED4 Zinc finger BED domain-containing protein 4 yes yes 2 0.030463 57.174 By matching By MS/MS By matching By matching By matching By matching 1 1 2983000 0 1020400 0 0 0 1962600 4896 737 4950 21827;21828 14473 14473 1 LTEEEKNRLNFLK EVFTKKTKLTEEEKNR KNRLNFLKKISQRYQK K L T L K K 0 1 2 0 0 0 3 0 0 0 3 2 0 1 0 0 1 0 0 0 0 13 2 1632.8835 CON__P02663 CON__P02663 153 165 yes yes 2;3;4 6.7597E-15 109.16 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 3 3 174170000 25363000 5545800 27558000 27040000 30959000 57703000 + 4897 289 4951 21829;21830;21831;21832;21833;21834;21835;21836;21837;21838;21839;21840 14474;14475;14476;14477;14478;14479;14480;14481 14477 8 LTEEFQNVR QSRRLQRRLTEEFQNV TEEFQNVRIIKPEASR R L T V R I 0 1 1 0 0 1 2 0 0 0 1 0 0 1 0 0 1 0 0 1 0 9 0 1134.5669 E9PGN6;Q9UI43 E9PGN6 114 122 FTSJ2 Putative ribosomal RNA methyltransferase 2 yes no 2 0.0060166 95.502 By matching By matching By matching By matching By matching By MS/MS 1 1 1475900 0 403910 0 0 0 1072000 4898 432 4952 21841;21842 14482 14482 1 LTEHFDEKPFSCEECGAK ASGMQYHKLTEHFDEK SCEECGAKFAANSTLK K L T A K F 1 0 0 1 2 0 4 1 1 0 1 2 0 2 1 1 1 0 0 0 0 18 1 2182.93 Q9NUA8;F8WAI8 Q9NUA8 827 844 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes no 3;4 0.0011336 75.445 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 2 2 2 2 32564000 3088500 1673800 5839600 4908300 8273200 8780900 4899 1545 4953 21843;21844;21845;21846;21847;21848;21849;21850;21851;21852 14483;14484;14485;14486;14487 14487 4 LTELGTVDPK KIQTGLKKLTELGTVD ELGTVDPKNKYQELIN K L T P K N 0 0 0 1 0 0 1 1 0 0 2 1 0 0 1 0 2 0 0 1 0 10 0 1071.5812 P46940;H0YLE8 P46940 1466 1475 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 2 0.01091 72.096 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5369100 0 749350 592760 0 1638600 2388300 4900 929 4954 21853;21854;21855;21856 14488 14488 1 LTELGTVDPKNK KIQTGLKKLTELGTVD GTVDPKNKYQELINDI K L T N K Y 0 0 1 1 0 0 1 1 0 0 2 2 0 0 1 0 2 0 0 1 0 12 1 1313.7191 P46940;H0YLE8 P46940 1466 1477 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 2;3 0.0041205 90.614 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 1 2 2 7313300 1189200 370260 467890 952780 0 4333200 4901 929 4955 21857;21858;21859;21860;21861;21862;21863;21864 14489;14490;14491;14492 14490 4 LTEPHQVYVQILQK YIEVNGMKLTEPHQVY VYVQILQKLTGQKATA K L T Q K L 0 0 0 0 0 3 1 0 1 1 2 1 0 0 1 0 1 0 1 2 0 14 0 1694.9356 Q13415 Q13415 573 586 ORC1 Origin recognition complex subunit 1 yes yes 3 0.00092247 72.681 By matching By MS/MS By matching By matching By matching By matching 1 32657000 0 32657000 0 0 0 0 4902 1080 4956 21865 14493 14493 1 LTEQLQATEK NAEAKITKLTEQLQAT EQLQATEKILNVNRMF K L T E K I 1 0 0 0 0 2 2 0 0 0 2 1 0 0 0 0 2 0 0 0 0 10 0 1159.6085 O60293-2;O60293 O60293-2 871 880 ZFC3H1 Zinc finger C3H1 domain-containing protein yes no 2 0.01867 64.73 By matching By MS/MS By matching By matching By matching By matching 1 1 2446700 1175200 1271500 0 0 0 0 4903 729 4957 21866;21867 14494 14494 1 LTESNSAMVK QPPAFFSKLTESNSAM ESNSAMVKSKKQEINK K L T V K S 1 0 1 0 0 0 1 0 0 0 1 1 1 0 0 2 1 0 0 1 0 10 0 1078.5329 C9J7T7;C9JE98;C9J239;Q9Y618-5;C9J0Q5;Q9Y618-4;C9JJF6;C9JFD3;Q9Y618-3;Q9Y618;Q9Y618-2;H7C184;H7C2D4;H0Y5V2 C9J7T7 1833 1842 NCOR2 Nuclear receptor corepressor 2 yes no 2 0.022444 61.593 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1995400 0 529510 650330 0 0 815590 4904 224 4958 21868;21869;21870 14495 14495 1 LTEVPVEPVLTVHPESK DFPVESVKLTEVPVEP LTVHPESKSKTKTRSR K L T S K S 0 0 0 0 0 0 3 0 1 0 2 1 0 0 3 1 2 0 0 4 0 17 0 1873.0197 Q9H307;Q9H307-2 Q9H307 537 553 PNN Pinin yes no 3 0.0034889 48.677 By matching By matching By matching By matching By MS/MS By matching 1 7732100 0 0 0 0 7732100 0 4905 1486 4959 21871 14496 14496 1 LTFNNPTTEFRYK VNHLRCEKLTFNNPTT PTTEFRYKLLRAGGVM K L T Y K L 0 1 2 0 0 0 1 0 0 0 1 1 0 2 1 0 3 0 1 0 0 13 1 1629.8151 Q03111 Q03111 122 134 MLLT1 Protein ENL yes yes 3 1.9355E-34 120.55 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 30862000 0 17361000 0 0 0 13500000 4906 1036 4960 21872;21873 14497;14498 14498 2 LTGEVVALK VVYKARNKLTGEVVAL TGEVVALKKIRLDTET K L T L K K 1 0 0 0 0 0 1 1 0 0 2 1 0 0 0 0 1 0 0 2 0 9 0 928.55933 P24941-2;P24941;G3V5T9;E7ESI2;G3V317 P24941-2 25 33 CDK2 Cyclin-dependent kinase 2 yes no 2 0.017155 71.614 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 35862000 2270200 5449300 4533800 1558700 4515900 17534000 4907 589 4961 21874;21875;21876;21877;21878;21879 14499;14500 14500 2 LTGRDPNDVRPIQAR NVDENIRKLTGRDPND DVRPIQARLLALSGPG K L T A R L 1 3 1 2 0 1 0 1 0 1 1 0 0 0 2 0 1 0 0 1 0 15 2 1706.9176 Q9H307;G3V5F0;G3V579 Q9H307 29 43 PNN Pinin yes no 4 0.012685 45.207 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 16865000 2624900 1700400 1170900 1271800 4474000 5622800 4908 1486 4962 21880;21881;21882;21883;21884;21885 14501;14502 14502 2 LTGSQACPSPRPRPR RGGDLYRRLTGSQACP PSPRPRPRGRPPAQAL R L T P R G 1 3 0 0 1 1 0 1 0 0 1 0 0 0 4 2 1 0 0 0 0 15 2 1678.8686 H7C0J3;H7C3H7 H7C0J3 344 358 CHD3 yes no 4 0.0039318 54.343 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4630500 0 0 779970 231110 824840 2794600 4909 663 4963 21886;21887;21888;21889 14503 14503 1 LTGVFAPRPSTGPHK PKHWMLDKLTGVFAPR RPSTGPHKLRECLPLI K L T H K L 1 1 0 0 0 0 0 2 1 0 1 1 0 1 3 1 2 0 0 1 0 15 1 1563.8522 P62701;Q8TD47;A6NH36;C9JEH7;P22090 P62701 23 37 RPS4X;RPS4Y2;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 3 0.020961 42.317 By matching By matching By matching By matching By MS/MS By matching 1 1949700 0 0 0 0 1949700 0 4910 993 4964 21890 14504 14504 1 LTGVIVENENITK VIMPLGSKLTGVIVEN VENENITKEGGLVDMA K L T T K E 0 0 2 0 0 0 2 1 0 2 1 1 0 0 0 0 2 0 0 2 0 13 0 1428.7824 Q8NFC6 Q8NFC6 1390 1402 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 3.1722E-09 103.76 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 26387000 13024000 3029500 4304900 920020 1302800 3805600 4911 1325 4965 21891;21892;21893;21894;21895;21896 14505;14506;14507;14508 14505 4 LTHDLQGPGAPPAQAWAAGPGAGPETAGEGTAAEAGDAPLASDRR PALLERHKLTHDLQGP APLASDRRLLLGPAGG K L T R R L 12 2 0 3 0 2 3 8 1 0 3 0 0 0 6 1 3 1 0 0 0 45 1 4262.0377 Q96SL8 Q96SL8 248 292 FIZ1 Flt3-interacting zinc finger protein 1 yes yes 4 0.00011944 17.789 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 12271000 0 8507900 0 0 3763000 0 4912 1419 4966 21897;21898 14509;14510 14510 2 LTHELPGIK DGEKVIPRLTHELPGI THELPGIKRGRQAEEE R L T I K R 0 0 0 0 0 0 1 1 1 1 2 1 0 0 1 0 1 0 0 0 0 9 0 1006.5811 H7C1J2;H7C1M5;Q9H147;F2Z2A4 H7C1J2 66 74 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 yes no 2 0.013016 80.455 By matching By matching By matching By matching By matching By MS/MS 1 1706000 0 0 0 0 0 1706000 4913 667 4967 21899 14511 14511 1 LTIAEER LPRGKGIRLTIAEERD RLTIAEERDKRLAAKQ R L T E R D 1 1 0 0 0 0 2 0 0 1 1 0 0 0 0 0 1 0 0 0 0 7 0 830.44978 P62701;Q8TD47 P62701 246 252 RPS4X;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2 yes no 2 0.011419 101.33 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1969300 397110 557800 506410 0 507960 0 4914 993 4968 21900;21901;21902;21903 14512 14512 1 LTIHGDLYYEGK FKWQTKPKLTIHGDLY GDLYYEGKEFETRLKE K L T G K E 0 0 0 1 0 0 1 2 1 1 2 1 0 0 0 0 1 0 2 0 0 12 0 1407.7034 Q13435;E9PPJ0;H0YEX5 Q13435 584 595 SF3B2 Splicing factor 3B subunit 2 yes no 3 0.0031471 67.879 By matching By matching By matching By matching By matching By MS/MS 1 1 1436400 0 402040 0 0 0 1034300 4915 1083 4969 21904;21905 14513 14513 1 LTIMLEK KVPRSQTKLTIMLEKL KLTIMLEKLGMDYDGR K L T E K L 0 0 0 0 0 0 1 0 0 1 2 1 1 0 0 0 1 0 0 0 0 7 0 846.48848 Q8IV48 Q8IV48 277 283 ERI1 3-5 exoribonuclease 1 yes yes 2 0.033983 89.752 By MS/MS By matching By matching By matching By matching By matching 1 2513300 2513300 0 0 0 0 0 4916 1276 4970 21906 14514 14514 0 LTLKGGAAVDPDSGLEHSAHVLEK NKSEKRMKLTLKGGAA HSAHVLEKGGKVFSAT K L T E K G 3 0 0 2 0 0 2 3 2 0 4 2 0 0 1 2 1 0 0 2 0 24 1 2443.2707 P09874 P09874 525 548 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 4;5 2.1123E-06 59.918 By matching By matching By matching By MS/MS By matching By matching 2 6734500 0 0 0 6734500 0 0 4917 815 4971 21907;21908 14515;14516 14515 2 LTLLQVASR ENEIIKQKLTLLQVAS TLLQVASRQKHLPKDT K L T S R Q 1 1 0 0 0 1 0 0 0 0 3 0 0 0 0 1 1 0 0 1 0 9 0 999.60768 O95239;O95239-2;F5H4Q9 O95239 994 1002 KIF4A Chromosome-associated kinesin KIF4A yes no 2 1.6958E-19 128.27 By matching By MS/MS By matching By matching By matching By matching 1 33022000 0 33022000 0 0 0 0 4918 768 4972 21909 14517 14517 1 LTLPGDKNRLK ELKPLRQKLTLPGDKN PGDKNRLKKVKDGAKP K L T L K K 0 1 1 1 0 0 0 1 0 0 3 2 0 0 1 0 1 0 0 0 0 11 2 1253.7456 O60293-2;O60293;O60293-4;G3V1X1 O60293-2 308 318 ZFC3H1 Zinc finger C3H1 domain-containing protein yes no 3 0.015196 74.841 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 3643200 0 477080 526890 400200 692750 1546200 4919 729 4973 21910;21911;21912;21913;21914 14518 14518 1 LTLVAPPGGPNGDSSGGTQGVAK KKMPVSQKLTLVAPPG GGTQGVAKLLTSPSLK K L T A K L 2 0 1 1 0 1 0 6 0 0 2 1 0 0 3 2 2 0 0 2 0 23 0 2079.0596 Q9NPG3-2;Q9NPG3 Q9NPG3-2 964 986 UBN1 Ubinuclein-1 yes no 2 9.052E-09 66.137 By matching By matching By matching By matching By matching By MS/MS 1 4687300 0 0 0 0 0 4687300 4920 1528 4974 21915 14519 14519 1 LTMLNTVSK PNPASRAKLTMLNTVS TMLNTVSKIRGQVKNP K L T S K I 0 0 1 0 0 0 0 0 0 0 2 1 1 0 0 1 2 0 0 1 0 9 0 1005.5529 Q99961 Q99961 68 76 SH3GL1 Endophilin-A2 yes yes 2 0.018028 70.908 By matching By matching By matching By matching By matching By MS/MS 1 1 2500500 0 0 0 0 390270 2110200 4921 1435 4975 21916;21917 14520 14520 1 LTMQVSSLQREPFTIAQGKGQK REKKKVERLTMQVSSL IAQGKGQKLCEIERIH R L T Q K L 1 1 0 0 0 4 1 2 0 1 2 2 1 1 1 2 2 0 0 1 0 22 2 2446.3002 P35659;D6R9L5 P35659 66 87 DEK Protein DEK yes no 4 0.0058481 47.089 By MS/MS By matching By matching By matching By matching By matching 2 13689000 13689000 0 0 0 0 0 4922 901 4976;4977 21918;21919 14521;14522 14522 101 2 LTNAEGVEFK FDSKKKVKLTNAEGVE NAEGVEFKLSKKQLQA K L T F K L 1 0 1 0 0 0 2 1 0 0 1 1 0 1 0 0 1 0 0 1 0 10 0 1106.5608 G5E9Z8;H0YH39;O76094 G5E9Z8 227 236 SRP72 Signal recognition particle subunit SRP72 yes no 2 0.0031326 91.549 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 4992900 730620 0 0 338700 2436700 1486900 4923 600 4978 21920;21921;21922;21923 14523;14524 14523 2 LTNTNRALALNCFAPINDQEGAEAK AEQSCDQKLTNTNRAL DQEGAEAKDWRSGKPV K L T A K D 5 1 4 1 1 1 2 1 0 1 3 1 0 1 1 0 2 0 0 0 0 25 1 2730.3395 B5ME40;F5GXG0;Q96T88 B5ME40 116 140 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 3 1.1534E-38 97.94 By matching By MS/MS By matching By matching By matching By matching 1 37973000 0 37973000 0 0 0 0 4924 175 4979 21924 14525 14525 1 LTPEEEEILNK LGRKKGAKLTPEEEEI EEEEILNKKRSKKIQK K L T N K K 0 0 1 0 0 0 4 0 0 1 2 1 0 0 1 0 1 0 0 0 0 11 0 1313.6715 Q5JR95;P62241 Q5JR95 109 119 RPS8 40S ribosomal protein S8 yes no 2 0.011908 62.633 By MS/MS By matching By matching By matching By matching By matching 1 853970 853970 0 0 0 0 0 4925 985 4980 21925 14526 14526 1 LTPEEEEILNKK LGRKKGAKLTPEEEEI EEEILNKKRSKKIQKK K L T K K R 0 0 1 0 0 0 4 0 0 1 2 2 0 0 1 0 1 0 0 0 0 12 1 1441.7664 Q5JR95;P62241 Q5JR95 109 120 RPS8 40S ribosomal protein S8 yes no 3 2.0891E-18 114.86 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 20919000 4065500 3601400 1734800 1248200 4785000 5484400 4926 985 4981 21926;21927;21928;21929;21930;21931 14527;14528;14529 14528 3 LTPEEEEILNKKR LGRKKGAKLTPEEEEI EEILNKKRSKKIQKKY K L T K R S 0 1 1 0 0 0 4 0 0 1 2 2 0 0 1 0 1 0 0 0 0 13 2 1597.8675 Q5JR95;P62241 Q5JR95 109 121 RPS8 40S ribosomal protein S8 yes no 4 0.023181 46.063 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 7632500 1530100 809470 1201400 836140 2467000 788450 4927 985 4982 21932;21933;21934;21935;21936;21937 14530;14531 14530 2 LTPLPEDNSMNVDQDGDPSDR FLSKIEEKLTPLPEDN QDGDPSDRMEVQEQEE K L T D R M 0 1 2 5 0 1 1 1 0 0 2 0 1 0 3 2 1 0 0 1 0 21 0 2314.0019 P78527;E7EUY0;P78527-2 P78527 3197 3217 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 1.5021E-45 109.5 By matching By matching By matching By matching By matching By MS/MS 1 8596500 0 0 0 0 0 8596500 4928 1012 4983 21938 14532 14532 1 LTPLSHEVISR LTTLDVTKLTPLSHEV LSHEVISRQATINIGT K L T S R Q 0 1 0 0 0 0 1 0 1 1 2 0 0 0 1 2 1 0 0 1 0 11 0 1250.6983 Q2VIR3;P41091;H7BZU1;Q2VIR3-2;F8W810 Q2VIR3 28 38 EIF2S3L;EIF2S3 Putative eukaryotic translation initiation factor 2 subunit 3-like protein;Eukaryotic translation initiation factor 2 subunit 3 yes no 3 0.011492 82.494 By matching By matching By matching By matching By matching By MS/MS 1 1482500 0 0 0 0 0 1482500 4929 910 4984 21939 14533 14533 1 LTPVRPAAASPIVSGAR HTMKPAPRLTPVRPAA SPIVSGARRRRVRCRK R L T A R R 4 2 0 0 0 0 0 1 0 1 1 0 0 0 3 2 1 0 0 2 0 17 1 1661.9577 E7EMR1;D4QA03;E9PIL6;Q9Y2K7-3;Q9Y2K7-2;Q9Y2K7 E7EMR1 110 126 KDM2A Lysine-specific demethylase 2A yes no 3 0.0020085 56.121 By matching By matching By matching By matching By matching By MS/MS 1 1 1 10848000 0 0 1761600 0 3295500 5790700 4930 314 4985 21940;21941;21942 14534 14534 1 LTPYEVDELR VEHPEVARLTPYEVDE PYEVDELRRKKEITVR R L T L R R 0 1 0 1 0 0 2 0 0 0 2 0 0 0 1 0 1 0 1 1 0 10 0 1233.6241 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 65 74 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 2 0.0027611 97.813 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 182250000 29134000 42168000 19049000 9260000 8383100 74256000 4931 1361;629 4986 21943;21944;21945;21946;21947;21948 14535;14536;14537;14538;14539 14538 5 LTPYEVDELRR VEHPEVARLTPYEVDE YEVDELRRKKEITVRG R L T R R K 0 2 0 1 0 0 2 0 0 0 2 0 0 0 1 0 1 0 1 1 0 11 1 1389.7252 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 65 75 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 3 0.0063658 62.166 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 63221000 11303000 10050000 8345500 6018300 10597000 16907000 4932 1361;629 4987 21949;21950;21951;21952;21953;21954 14540;14541;14542;14543;14544 14542 5 LTPYEVDELRRK VEHPEVARLTPYEVDE EVDELRRKKEITVRGG R L T R K K 0 2 0 1 0 0 2 0 0 0 2 1 0 0 1 0 1 0 1 1 0 12 2 1517.8202 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 65 76 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 3 0.00037255 98.156 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 60807000 257590 642750 0 0 59333000 572980 4933 1361;629 4988 21955;21956;21957;21958 14545 14545 1 LTQDQDVDVK EVKPILEKLTQDQDVD QDQDVDVKYFAQEALT K L T V K Y 0 0 0 3 0 2 0 0 0 0 1 1 0 0 0 0 1 0 0 2 0 10 0 1159.5721 F5H3X9;B4DDF7;P30153;E9PH38;B4E1Q0 F5H3X9 512 521 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 2 2.2826E-09 117.52 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 6223000 0 1319700 1523900 434090 913590 2031800 4934 81 4989 21959;21960;21961;21962;21963 14546;14547;14548;14549 14547 4 LTQEETNFK EKEKELQKLTQEETNF TQEETNFKSLVHDLFQ K L T F K S 0 0 1 0 0 1 2 0 0 0 1 1 0 1 0 0 2 0 0 0 0 9 0 1108.5401 E9PD53;Q9NTJ3;Q9NTJ3-2;F5H0U7 E9PD53 540 548 SMC4 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 4 yes no 2 0.012845 80.755 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 3758000 0 0 722170 0 688940 2346900 4935 419 4990 21964;21965;21966 14550;14551 14551 2 LTQTSGETTHTDKEPVGEGK EELLAVGKLTQTSGET KEPVGEGKGTKAFKQP K L T G K G 0 0 0 1 0 1 3 3 1 0 1 2 0 0 1 1 5 0 0 1 0 20 1 2114.0128 P46013;F5H4V4;P46013-2 P46013 2861 2880 MKI67 Antigen KI-67 no no 3;4 3.4646E-07 88.385 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 2 2 2 2 160920000 17580000 31110000 27765000 14309000 25450000 44710000 4936 919;920 4991 21967;21968;21969;21970;21971;21972;21973;21974;21975;21976;21977;21978 14552;14553;14554;14555;14556;14557;14558;14559;14560;14561;14562;14563;14564 14557 13 LTQTSGETTHTDKEPVGEGKGTK EELLAVGKLTQTSGET VGEGKGTKAFKQPAKR K L T T K A 0 0 0 1 0 1 3 4 1 0 1 3 0 0 1 1 6 0 0 1 0 23 2 2400.1769 P46013;F5H4V4;P46013-2 P46013 2861 2883 MKI67 Antigen KI-67 no no 3;4 2.445E-10 82.406 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 2 2 2 1 197480000 32927000 5838500 81246000 4046000 61329000 12098000 4937 919;920 4992 21979;21980;21981;21982;21983;21984;21985;21986;21987 14565;14566;14567;14568;14569;14570;14571;14572 14569 8 LTQTSGETTHTDKVPGGEDK KELSALKKLTQTSGET KVPGGEDKSINAFRET K L T D K S 0 0 0 2 0 1 2 3 1 0 1 2 0 0 1 1 5 0 0 1 0 20 1 2099.9971 P46013;F5H4V4;P46013-2 P46013 1410 1429 MKI67 Antigen KI-67 no no 3;4 8.4441E-11 90.442 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 2 3 559870000 81841000 112910000 118640000 58734000 62665000 125070000 4938 919;920 4993 21988;21989;21990;21991;21992;21993;21994;21995;21996;21997;21998;21999;22000;22001;22002 14573;14574;14575;14576;14577;14578;14579;14580;14581;14582;14583;14584;14585;14586;14587;14588 14579 16 LTQTSGETTHTHTEPTGDGK EELLAVGKLTQTSGET TEPTGDGKSMKAFMES K L T G K S 0 0 0 1 0 1 2 3 2 0 1 1 0 0 1 1 7 0 0 0 0 20 0 2096.9611 P46013;F5H4V4;P46013-2 P46013 1652 1671 MKI67 Antigen KI-67 no no 4 0.028045 33.666 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 407510000 0 57774000 60271000 0 1403800 288060000 4939 919;920 4994 22003;22004;22005;22006 14589 14589 1 LTQTSGETTHTHTEPTGDGKSMK EELLAVGKLTQTSGET TGDGKSMKAFMESPKQ K L T M K A 0 0 0 1 0 1 2 3 2 0 1 2 1 0 1 2 7 0 0 0 0 23 1 2443.1285 P46013;F5H4V4;P46013-2 P46013 1652 1674 MKI67 Antigen KI-67 no no 4 0.03531 31.767 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 5374100 693920 459890 1784400 1000600 1245600 189690 4940 919;920 4995 22007;22008;22009;22010;22011;22012 14590 14590 1 LTQTSGQSTHTHKEPASGDEGIK EELSAVERLTQTSGQS ASGDEGIKVLKQRAKK R L T I K V 1 0 0 1 0 2 2 3 2 1 1 2 0 0 1 3 4 0 0 0 0 23 1 2408.1568 P46013;F5H4V4;P46013-2 P46013 2622 2644 MKI67 Antigen KI-67 no no 3;4 0.00073919 53.254 By matching By matching By matching By MS/MS By MS/MS By matching 2 2 2 2 2 2 44656000 3286400 9187000 5184900 2775700 8419200 15803000 4941 919;920 4996 22013;22014;22015;22016;22017;22018;22019;22020;22021;22022;22023;22024 14591;14592 14592 2 LTQVLRDSFIGENSR HTPFRESKLTQVLRDS SFIGENSRTCMIATIS K L T S R T 0 2 1 1 0 1 1 1 0 1 2 0 0 1 0 2 1 0 0 1 0 15 1 1733.906 B7Z6Q6;Q99661;Q99661-2;B7Z7M6;H0Y5Z9;O00139-1;E9PB70;O00139;O00139-4;O00139-2 B7Z6Q6 503 517 KIF2C;KIF2A Kinesin-like protein KIF2C;Kinesin-like protein KIF2A no no 2;3 2.6995E-70 133.23 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 2 551110000 62932000 69110000 80067000 0 24770000 314230000 4942 193;403;686 4997 22025;22026;22027;22028;22029;22030;22031;22032;22033 14593;14594;14595;14596;14597;14598;14599;14600 14596 8 LTRDAQSPDESKTNEK KKMAENIKLTRDAQSP DESKTNEKLYTVCDVA K L T E K L 1 1 1 2 0 1 2 0 0 0 1 2 0 0 1 2 2 0 0 0 0 16 2 1817.8755 Q29RF7 Q29RF7 1059 1074 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 3;4 1.1863E-06 92.952 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 2 2 1 1 1 12002000 744000 3347600 4747600 1670600 357980 1133900 4943 1159 4998 22034;22035;22036;22037;22038;22039;22040;22041 14601;14602;14603;14604 14602 4 LTRDDVIQICGPADGIR FSGADLLKLTRDDVIQ CGPADGIRLFNALKGR K L T I R L 1 2 0 3 1 1 0 2 0 3 1 0 0 0 1 0 1 0 0 1 0 17 1 1897.968 Q12800-3;Q12800;F8VWL0;Q12800-2;Q12800-4 Q12800-3 309 325 TFCP2 Alpha-globin transcription factor CP2 yes no 3 0.00063348 82.449 By matching By MS/MS By matching By matching By matching By matching 1 4567800 0 4567800 0 0 0 0 4944 1060 4999 22042 14605 14605 1 LTRPAASPAVGEK SPSPAREKLTRPAASP ASPAVGEKLKKTEPAA K L T E K L 3 1 0 0 0 0 1 1 0 0 1 1 0 0 2 1 1 0 0 1 0 13 1 1295.7197 Q8N2M8-3;F8WAG9;F5H0Q6;Q8N2M8 Q8N2M8-3 541 553 CLASRP CLK4-associating serine/arginine rich protein yes no 3 0.0038001 63.181 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1438600 424280 250320 0 0 0 763970 4945 505 5000 22043;22044;22045 14606 14606 1 LTRRLVNSQCEFER IVKESGGKLTRRLVNS NSQCEFERRKPDGTTT K L T E R R 0 3 1 0 1 1 2 0 0 0 2 0 0 1 0 1 1 0 0 1 0 14 2 1806.9159 Q9NPI1;Q9NPI1-2 Q9NPI1 329 342 BRD7 Bromodomain-containing protein 7 yes no 4 0.019497 44.511 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4966100 0 2169800 965650 785450 0 1045200 4946 1529 5001 22046;22047;22048;22049 14607 14607 1 LTRTSGETTQTHTEPTGDSK EEPLAVSKLTRTSGET TEPTGDSKSIKAFKES K L T S K S 0 1 0 1 0 1 2 2 1 0 1 1 0 0 1 2 7 0 0 0 0 20 1 2146.0138 P46013;F5H4V4;P46013-2 P46013 2501 2520 MKI67 Antigen KI-67 no no 3;4 2.9192E-11 93.5 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 510040000 53346000 71584000 121130000 68275000 79175000 116520000 4947 919;920 5002 22050;22051;22052;22053;22054;22055;22056;22057;22058;22059;22060;22061 14608;14609;14610;14611;14612;14613;14614;14615;14616 14613 9 LTRTSGETTQTHTEPTGDSKSIK EEPLAVSKLTRTSGET TGDSKSIKAFKESPKQ K L T I K A 0 1 0 1 0 1 2 2 1 1 1 2 0 0 1 3 7 0 0 0 0 23 2 2474.2249 P46013;F5H4V4;P46013-2 P46013 2501 2523 MKI67 Antigen KI-67 no no 4;5 3.1131E-54 107.25 By matching By matching By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 1 2 48582000 6504500 4558900 17851000 7483300 3781500 8402900 4948 919;920 5003 22062;22063;22064;22065;22066;22067;22068;22069;22070;22071;22072 14617;14618;14619;14620;14621 14621 5 LTSDDVKEQIYK RSVPTWLKLTSDDVKE DVKEQIYKLAKKGLTP K L T Y K L 0 0 0 2 0 1 1 0 0 1 1 2 0 0 0 1 1 0 1 1 0 12 1 1437.7351 E9PS50;P62277 E9PS50 28 39 RPS13 40S ribosomal protein S13 yes no 2;3 5.9897E-12 108.98 By matching By MS/MS By matching By matching By MS/MS By MS/MS 2 2 2 13142000 0 2276400 0 0 5167300 5698000 4949 471 5004 22073;22074;22075;22076;22077;22078 14622;14623;14624;14625;14626;14627;14628 14625 7 LTSLNEEYTK GVKFTNSKLTSLNEEY SLNEEYTKNKTEYEEA K L T T K N 0 0 1 0 0 0 2 0 0 0 2 1 0 0 0 1 2 0 1 0 0 10 0 1196.5925 B4E2Z2;P43246;E9PHA6;B4DL39;B4DSB9 B4E2Z2 490 499 MSH2 DNA mismatch repair protein Msh2 yes no 2 9.5245E-48 139.15 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 10484000 818100 0 0 0 2484500 7181000 4950 162 5005 22079;22080;22081 14629;14630 14629 2 LTSLNEEYTKNK GVKFTNSKLTSLNEEY NEEYTKNKTEYEEAQD K L T N K T 0 0 2 0 0 0 2 0 0 0 2 2 0 0 0 1 2 0 1 0 0 12 1 1438.7304 B4E2Z2;P43246;E9PHA6;B4DL39;B4DSB9 B4E2Z2 490 501 MSH2 DNA mismatch repair protein Msh2 yes no 2;3 4.295E-07 101.39 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 2 2 1 2 2 25709000 2004700 4690000 3090000 2007300 3401000 10516000 4951 162 5006 22082;22083;22084;22085;22086;22087;22088;22089;22090;22091 14631;14632;14633;14634;14635 14632 5 LTSLNVKYNNDK TLRIDFSKLTSLNVKY NVKYNNDKSRDYTRPD K L T D K S 0 0 3 1 0 0 0 0 0 0 2 2 0 0 0 1 1 0 1 1 0 12 1 1407.7358 P26599;P26599-2;P26599-3;O95758-1;O95758-6;O95758-2;O95758;O95758-5;O95758-4;B1ALY6 P26599 260 271 PTBP1;PTBP3 Polypyrimidine tract-binding protein 1;Polypyrimidine tract-binding protein 3 no no 2;3 6.0507E-13 112.64 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 1 7056700 331970 4865400 0 0 0 1859400 4952 882;774 5007 22092;22093;22094;22095 14636;14637;14638 14637 3 LTSLNVKYNNDKSR TLRIDFSKLTSLNVKY KYNNDKSRDYTRPDLP K L T S R D 0 1 3 1 0 0 0 0 0 0 2 2 0 0 0 2 1 0 1 1 0 14 2 1650.8689 P26599;P26599-2;P26599-3;O95758-1;O95758-6;O95758-2;O95758;O95758-5;O95758-4;B1ALY6 P26599 260 273 PTBP1;PTBP3 Polypyrimidine tract-binding protein 1;Polypyrimidine tract-binding protein 3 no no 4 0.037169 39.033 By matching By MS/MS By matching By matching By matching By matching 1 1 1 6541800 0 4934800 603280 0 0 1003700 4953 882;774 5008 22096;22097;22098 14639 14639 1 LTSMHFYGWK IAEPNYGKLTSMHFYG SMHFYGWKQGLKTGMY K L T W K Q 0 0 0 0 0 0 0 1 1 0 1 1 1 1 0 1 1 1 1 0 0 10 0 1268.6012 P23921;H0YFI0;E9PD78;E9PL69;F5H861 P23921 720 729 RRM1 Ribonucleoside-diphosphate reductase large subunit;Ribonucleoside-diphosphate reductase yes no 3 0.001852 102.07 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 32649000 0 0 3143600 4403500 3155300 21947000 4954 870 5009 22099;22100;22101;22102 14640;14641;14642;14643 14642 4 LTSSTSNSSLTADVNSGFAK TAAKRKRKLTSSTSNS DVNSGFAKRVRQDNSS K L T A K R 2 0 2 1 0 0 0 1 0 0 2 1 0 1 0 6 3 0 0 1 0 20 0 1985.9542 Q8NI77 Q8NI77 833 852 KIF18A Kinesin-like protein KIF18A yes yes 2 7.3269E-11 90.896 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 17562000 11814000 1656400 0 0 0 4092500 4955 1332 5010 22103;22104;22105 14644;14645 14645 2 LTTAQEVLAR PQPPATEKLTTAQEVL TAQEVLARARNLISPR K L T A R A 2 1 0 0 0 1 1 0 0 0 2 0 0 0 0 0 2 0 0 1 0 10 0 1100.619 Q9H211 Q9H211 357 366 CDT1 DNA replication factor Cdt1 yes yes 2 0.0030827 92.239 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 12931000 940110 2453700 3152300 0 1358300 5026200 4956 1485 5011 22106;22107;22108;22109;22110 14646;14647 14646 2 LTTEATQTPVSNKKPVFDLK AAVITPFKLTTEATQT KKPVFDLKASLSRPLN K L T L K A 1 0 1 1 0 1 1 0 0 0 2 3 0 1 2 1 4 0 0 2 0 20 2 2216.2052 Q9BXS6-2;Q9BXS6-3;Q9BXS6;Q9BXS6-5;Q9BXS6-4 Q9BXS6-2 341 360 NUSAP1 Nucleolar and spindle-associated protein 1 no no 3 0.0025919 55.453 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 24874000 6096500 2287900 8254100 246680 892800 7096400 4957 1463;1464 5012 22111;22112;22113;22114;22115;22116 14648;14649;14650;14651 14648 4 LTTINCEEGDKLK MEVVVHGRLTTINCEE CEEGDKLKLTCFELAP R L T L K L 0 0 1 1 1 0 2 1 0 1 2 2 0 0 0 0 2 0 0 0 0 13 1 1519.7552 Q16666-3;Q16666-2;Q16666;H3BLV7;E7EPR3 Q16666-3 610 622 IFI16 Gamma-interferon-inducible protein 16 yes no 2 0.029736 54.023 By matching By matching By matching By matching By MS/MS By matching 1 1 1973200 0 0 0 0 1337600 635650 4958 1155 5013 22117;22118 14652 14652 1 LTTTGQVTSPVK KKAVVQAKLTTTGQVT GQVTSPVKGASFVTST K L T V K G 0 0 0 0 0 1 0 1 0 0 1 1 0 0 1 1 4 0 0 2 0 12 0 1230.682 P49916-2;P49916 P49916-2 202 213 LIG3 DNA ligase 3 yes no 2 0.0079543 61.11 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 5723800 765380 454590 0 787750 1797400 1918700 4959 947 5014 22119;22120;22121;22122;22123 14653;14654 14654 2 LTTTGQVTSPVKGASFVTSTNPRK KKAVVQAKLTTTGQVT VTSTNPRKFSGFSAKP K L T R K F 1 1 1 0 0 1 0 2 0 0 1 2 0 1 2 3 6 0 0 3 0 24 2 2476.3286 P49916-2;P49916 P49916-2 202 225 LIG3 DNA ligase 3 yes no 4 0.022517 32.896 By matching By matching By matching By MS/MS By matching By matching 1 1 1 2962700 0 564680 0 1425000 0 973050 4960 947 5015 22124;22125;22126 14655 14655 1 LTTVCPTVKPQTQGLAK HADGLCHKLTTVCPTV PQTQGLAKDAWEIPRE K L T A K D 1 0 0 0 1 2 0 1 0 0 2 2 0 0 2 0 4 0 0 2 0 17 1 1841.0081 P07947 P07947 251 267 YES1 Tyrosine-protein kinase Yes yes yes 3 0.0022728 54.237 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 20652000 0 3720200 5613600 0 1260300 10058000 4961 803 5016 22127;22128;22129;22130 14656;14657;14658 14657 3 LTVENSPKQEAGISEGQGTAGEEEEK NFPNEFAKLTVENSPK TAGEEEEKKKQKRGGR K L T E K K 2 0 1 0 0 2 7 4 0 1 1 2 0 0 1 2 2 0 0 1 0 26 1 2716.2675 F8VVL1;O43583 F8VVL1 68 93 DENR Density-regulated protein yes no 3 1.2735E-28 90.778 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 105250000 27807000 12385000 14070000 13161000 24209000 13620000 4962 544 5017 22131;22132;22133;22134;22135;22136 14659;14660;14661;14662;14663;14664 14659 6 LTVENSPKQEAGISEGQGTAGEEEEKK NFPNEFAKLTVENSPK AGEEEEKKKQKRGGRG K L T K K K 2 0 1 0 0 2 7 4 0 1 1 3 0 0 1 2 2 0 0 1 0 27 2 2844.3625 F8VVL1;O43583 F8VVL1 68 94 DENR Density-regulated protein yes no 4 1.6888E-16 79.935 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 29409000 6632400 3813900 5378400 4543000 5259400 3782300 4963 544 5018 22137;22138;22139;22140;22141;22142 14665;14666;14667;14668;14669;14670;14671;14672 14670 8 LTVMYSQINGASR LEATLRHKLTVMYSQI SQINGASRALDDVRNR K L T S R A 1 1 1 0 0 1 0 1 0 1 1 0 1 0 0 2 1 0 1 1 0 13 0 1438.7238 Q14258 Q14258 206 218 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 0.0021953 71.513 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 11535000 4980000 970920 0 341600 0 5242400 4964 1105 5019 22143;22144;22145;22146 14673;14674 14673 2 LTWHAYPEDAENKEK VIAFYEERLTWHAYPE EDAENKEKETAKS___ R L T E K E 2 0 1 1 0 0 3 0 1 0 1 2 0 0 1 0 1 1 1 0 0 15 1 1829.8584 G3V1X9;P45973 G3V1X9 171 185 CBX5 Chromobox protein homolog 5 yes no 4 0.02095 42.52 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 8495700 0 1359000 2846600 0 0 4290100 4965 579 5020 22147;22148;22149 14675;14676 14676 2 LTWHSCPEDEAQ VIAFYEERLTWHSCPE SCPEDEAQ________ R L T A Q - 1 0 0 1 1 1 2 0 1 0 1 0 0 0 1 1 1 1 0 0 0 12 0 1471.6038 Q13185 Q13185 172 183 CBX3 Chromobox protein homolog 3 yes yes 2 7.4324E-05 99.283 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 7234000 732320 1975900 1242500 0 1302300 1981000 4966 1075 5021 22150;22151;22152;22153;22154 14677;14678;14679;14680 14679 3 LTYLLQNSLGGSAK HVPYRNSKLTYLLQNS NSLGGSAKMLMFVNIS K L T A K M 1 0 1 0 0 1 0 2 0 0 4 1 0 0 0 2 1 0 1 0 0 14 0 1463.7984 Q9BW19 Q9BW19 620 633 KIFC1 Kinesin-like protein KIFC1 yes yes 2 7.7131E-06 83.869 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 35050000 0 25828000 0 0 9222100 0 4967 1456 5022 22155;22156;22157 14681;14682;14683 14683 2 LVCSGENDNHGQIANLPSAVTSDQK ANTATEEKLVCSGEND SAVTSDQKSQKVDTLP K L V Q K S 2 0 3 2 1 2 1 2 1 1 2 1 0 0 1 3 1 0 0 2 0 25 0 2653.2402 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 1626 1650 AHCTF1 Protein ELYS yes no 3 0 180.03 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 74647000 37610000 8160100 25872000 0 3005300 0 4968 1345 5023 22158;22159;22160;22161 14684;14685;14686;14687;14688;14689 14689 6 LVCSVTGMALPR IHYGQTVKLVCSVTGM VTGMALPRLIIRKVDK K L V P R L 1 1 0 0 1 0 0 1 0 0 2 0 1 0 1 1 1 0 0 2 0 12 0 1302.6788 Q06330;D6R927;Q06330-5;Q06330-4;Q06330-6;Q06330-7;Q06330-3;Q06330-2 Q06330 250 261 RBPJ Recombining binding protein suppressor of hairless yes no 2 0.0017858 77.597 By matching By matching By matching By matching By MS/MS By matching 1 1 11417000 0 0 4153600 0 7263700 0 4969 1042 5024 22162;22163 14690 14690 1 LVCTDIADVSVK WKKGRINKLVCTDIAD DIADVSVKQCQQRYED K L V V K Q 1 0 0 2 1 0 0 0 0 1 1 1 0 0 0 1 1 0 0 3 0 12 0 1318.6803 O43148;O43148-2;B7Z8S9 O43148 223 234 RNMT mRNA cap guanine-N7 methyltransferase yes no 2 0.014704 55.105 By matching By matching By matching By matching By matching By MS/MS 1 12546000 0 0 0 0 0 12546000 4970 709 5025 22164 14691 14691 1 LVCTDIADVSVKQCQQR WKKGRINKLVCTDIAD SVKQCQQRYEDMKNRR K L V Q R Y 1 1 0 2 2 3 0 0 0 1 1 1 0 0 0 1 1 0 0 3 0 17 1 2018.9877 O43148;O43148-2;B7Z8S9 O43148 223 239 RNMT mRNA cap guanine-N7 methyltransferase yes no 3 1.2518E-07 91.076 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 2 1 1 18961000 1671600 3009300 5276100 494360 0 8509900 4971 709 5026 22165;22166;22167;22168;22169;22170 14692;14693;14694;14695;14696 14693 5 LVDQSGPPHEPK HGFAAEFKLVDQSGPP SGPPHEPKFVYQAKVG K L V P K F 0 0 0 1 0 1 1 1 1 0 1 1 0 0 3 1 0 0 0 1 0 12 0 1302.6568 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 746 757 ADAR Double-stranded RNA-specific adenosine deaminase no no 2;3 0.0015632 84.821 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 1 1 2 1 2 42952000 1440200 6260800 1016200 1522000 8839100 23874000 4972 352;968 5027 22171;22172;22173;22174;22175;22176;22177;22178;22179 14697;14698;14699;14700;14701;14702 14700 6 LVDQSGPPHEPKFVYQAK HGFAAEFKLVDQSGPP PKFVYQAKVGGRWFPA K L V A K V 1 0 0 1 0 2 1 1 1 0 1 2 0 1 3 1 0 0 1 2 0 18 1 2039.0476 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 746 763 ADAR Double-stranded RNA-specific adenosine deaminase no no 3;4 4.8535E-14 99.055 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 109150000 17286000 14912000 14946000 9442700 14215000 38345000 4973 352;968 5028 22180;22181;22182;22183;22184;22185;22186;22187;22188;22189;22190;22191 14703;14704;14705;14706;14707;14708;14709;14710;14711;14712;14713 14712 11 LVDSPDIQPVGTCEK DNRNDFWRLVDSPDIQ QPVGTCEKEGDLLQPP R L V E K E 0 0 0 2 1 1 1 1 0 1 1 1 0 0 2 1 1 0 0 2 0 15 0 1656.8029 B4DZR9;Q9UQR0 B4DZR9 77 91 SCML2 Sex comb on midleg-like protein 2 yes no 2 1.8553E-08 90.853 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 4089400 0 1831500 589230 476760 0 1191900 4974 149 5029 22192;22193;22194;22195;22196 14714;14715;14716 14716 3 LVEAEMDGAAAAK EKECLMSKLVEAEMDG MDGAAAAKQVMALKDT K L V A K Q 5 0 0 1 0 0 2 1 0 0 1 1 1 0 0 0 0 0 0 1 0 13 0 1274.6177 Q5BJF6-8;Q5BJF6-5;Q5BJF6-6;B4DX73;Q5BJF6-7;Q5BJF6-2;Q5BJF6-3;Q5BJF6-4;Q5BJF6;Q5T4C3;Q5T4C6;Q5T4C2;Q5BJF6-9 Q5BJF6-8 192 204 ODF2 Outer dense fiber protein 2 yes no 2 0.018698 49.356 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1847000 0 323700 0 0 394370 1129000 4975 137 5030 22197;22198;22199 14717 14717 1 LVEALAAATEK LNMMPEEKLVEALAAA ALAAATEKQKKALEKL K L V E K Q 4 0 0 0 0 0 2 0 0 0 2 1 0 0 0 0 1 0 0 1 0 11 0 1114.6234 Q9BRJ7 Q9BRJ7 188 198 NUDT16L1 Protein syndesmos yes yes 2 1.1741E-29 126.71 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 35157000 2238100 8022000 5303800 1659700 0 17933000 4976 1440 5031 22200;22201;22202;22203;22204 14718;14719;14720;14721 14718 4 LVEALAAATEKQK LNMMPEEKLVEALAAA AAATEKQKKALEKLLP K L V Q K K 4 0 0 0 0 1 2 0 0 0 2 2 0 0 0 0 1 0 0 1 0 13 1 1370.7769 Q9BRJ7 Q9BRJ7 188 200 NUDT16L1 Protein syndesmos yes yes 2;3 3.2294E-110 152.96 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 4 2 664560000 50529000 139140000 116980000 41784000 72627000 243510000 4977 1440 5032 22205;22206;22207;22208;22209;22210;22211;22212;22213;22214;22215;22216;22217;22218;22219 14722;14723;14724;14725;14726;14727;14728;14729;14730;14731;14732 14723 9 LVEALAAATEKQKK LNMMPEEKLVEALAAA AATEKQKKALEKLLPA K L V K K A 4 0 0 0 0 1 2 0 0 0 2 3 0 0 0 0 1 0 0 1 0 14 2 1498.8719 Q9BRJ7 Q9BRJ7 188 201 NUDT16L1 Protein syndesmos yes yes 3 2.227E-07 98.368 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 18360000 869700 3509200 3364300 1721600 1637200 7258100 4978 1440 5033 22220;22221;22222;22223;22224;22225 14733;14734;14735;14736;14737;14738 14734 6 LVEALCAEHQINLIK CDEPMYVKLVEALCAE EHQINLIKVDDNKKLG K L V I K V 2 0 1 0 1 1 2 0 1 2 3 1 0 0 0 0 0 0 0 1 0 15 0 1749.9447 P25398 P25398 64 78 RPS12 40S ribosomal protein S12 yes yes 3 0.0084031 68.262 By matching By matching By matching By matching By MS/MS By matching 1 0 0 0 0 0 0 0 4979 875 5034 22226 14739 14739 1 LVEIDNGKQR TKRRHETRLVEIDNGK EIDNGKQREFESRLAD R L V Q R E 0 1 1 1 0 1 1 1 0 1 1 1 0 0 0 0 0 0 0 1 0 10 1 1170.6357 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCJ4;Q5TCI8;H0YAB0 P02545 226 235 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.0069424 99.815 By matching By matching By matching By matching By matching By MS/MS 1 1 1457600 0 574730 0 0 0 882900 4980 783 5035 22227;22228 14740 14740 1 LVEIDNGKQREFESR TKRRHETRLVEIDNGK KQREFESRLADALQEL R L V S R L 0 2 1 1 0 1 3 1 0 1 1 1 0 1 0 1 0 0 0 1 0 15 2 1818.9224 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCJ4;Q5TCI8;H0YAB0 P02545 226 240 LMNA Prelamin-A/C;Lamin-A/C yes no 3;4 0.0021901 62.088 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 1 2 1 2 43425000 2462600 12111000 4420900 2426600 4663800 17341000 4981 783 5036 22229;22230;22231;22232;22233;22234;22235;22236;22237 14741;14742;14743;14744 14742 4 LVENCVCLLR GQKDSDSKLVENCVCL ENCVCLLRNLSYQVHR K L V L R N 0 1 1 0 2 0 1 0 0 0 3 0 0 0 0 0 0 0 0 2 0 10 0 1274.6475 O60716-32;O60716-31;O60716-29;O60716-27;O60716-30;O60716-28;O60716-26;O60716-25;O60716-24;O60716-23;O60716-21;O60716-19;O60716-22;O60716-20;O60716-16;O60716-18;O60716-15;O60716-17;O60716-13;O60716-11;O60716-14;O60716-12;O60716-10;O60716-8;O60716-9;E9PIE5;O60716-7;O60716-5;C9JZR2;O60716-3;O60716-6;F8WA43;O60716-4;O60716-2;O60716 O60716-32 252 261 CTNND1 Catenin delta-1 yes no 2 0.0078923 83.862 By matching By MS/MS By matching By matching By matching By matching 1 5937000 0 5937000 0 0 0 0 4982 275 5037 22238 14745 14745 1 LVETLEDQELK ACKLDLQKLVETLEDQ TLEDQELKENVEIICN K L V L K E 0 0 0 1 0 1 3 0 0 0 3 1 0 0 0 0 1 0 0 1 0 11 0 1315.6871 O95239;O95239-2;Q2VIQ3 O95239 450 460 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 2 0.022875 70.685 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 4983 768 5038 22239 14746 14746 1 LVEVEWEEHLARNPPTD QATMELYKLVEVEWEE LARNPPTD________ K L V T D - 1 1 1 1 0 0 4 0 1 0 2 0 0 0 2 0 1 1 0 2 0 17 1 2032.9854 Q9H9L3 Q9H9L3 337 353 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 yes yes 3 2.5618E-73 127.57 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 69145000 0 21870000 0 28350000 0 18925000 4984 1509 5039 22240;22241;22242 14747;14748;14749 14749 3 LVFLEDGTSQVRKEPK NAKKMTHKLVFLEDGT SQVRKEPKTYFNGDLK K L V P K T 0 1 0 1 0 1 2 1 0 0 2 2 0 1 1 1 1 0 0 2 0 16 2 1844.9996 Q8IWC1-2;Q8IWC1;H7BY77;Q8IWC1-3 Q8IWC1-2 747 762 MAP7D3 MAP7 domain-containing protein 3 yes no 3 0.01946 47.621 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 5218400 0 693420 1320200 0 1204800 2000000 4985 1280 5040 22243;22244;22245;22246 14750 14750 1 LVGMSEACLHRK PDREHDWKLVGMSEAC SEACLHRKSHSERRST K L V R K S 1 1 0 0 1 0 1 1 1 0 2 1 1 0 0 1 0 0 0 1 0 12 1 1399.7064 P10828;C9JJM3;C9JZS5;C9JHC2;C9JTN1 P10828 29 40 THRB Thyroid hormone receptor beta yes no 3 0.016741 60.598 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1349500 0 0 0 0 571510 778000 4986 822 5041 22247;22248;22249 14751;14752 14751 2 LVHPGVAEVVFVK CGALKRARLVHPGVAE VAEVVFVKKDDAITAY R L V V K K 1 0 0 0 0 0 1 1 1 0 1 1 0 1 1 0 0 0 0 5 0 13 0 1392.8129 Q9BY77;Q9BY77-2;B4DMM2 Q9BY77 311 323 POLDIP3 Polymerase delta-interacting protein 3 yes no 3 4.266E-74 138.42 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 25353000 0 0 0 0 13525000 11828000 4987 1465 5042 22250;22251 14753;14754 14754 2 LVHPGVAEVVFVKK CGALKRARLVHPGVAE AEVVFVKKDDAITAYK R L V K K D 1 0 0 0 0 0 1 1 1 0 1 2 0 1 1 0 0 0 0 5 0 14 1 1520.9079 Q9BY77;Q9BY77-2;B4DMM2 Q9BY77 311 324 POLDIP3 Polymerase delta-interacting protein 3 yes no 3 5.7552E-43 124.48 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 21291000 6882900 0 6216300 0 0 8191900 4988 1465 5043 22252;22253;22254 14755;14756;14757 14757 3 LVIDEPAKEK GSSDEEGKLVIDEPAK IDEPAKEKNEKGALKR K L V E K N 1 0 0 1 0 0 2 0 0 1 1 2 0 0 1 0 0 0 0 1 0 10 1 1140.639 P51858;A8K8G0;Q5SZ08;Q5SZ07;B7Z525 P51858 139 148 HDGF Hepatoma-derived growth factor yes no 2 0.0075304 94.692 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 10964000 905720 1623700 1170500 677530 3420800 3165800 4989 954 5044 22255;22256;22257;22258;22259;22260 14758;14759 14758 2 LVIDEPAKEKNEK GSSDEEGKLVIDEPAK PAKEKNEKGALKRRAG K L V E K G 1 0 1 1 0 0 3 0 0 1 1 3 0 0 1 0 0 0 0 1 0 13 2 1511.8195 P51858;A8K8G0;Q5SZ08;Q5SZ07;B7Z525 P51858 139 151 HDGF Hepatoma-derived growth factor yes no 3 0.0051362 80.69 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 17280000 2088900 0 2813300 1921400 3110100 7346200 4990 954 5045 22261;22262;22263;22264;22265 14760;14761;14762;14763 14762 4 LVILANNCPALR MIRQGKAKLVILANNC ANNCPALRKSEIEYYA K L V L R K 2 1 2 0 1 0 0 0 0 1 3 0 0 0 1 0 0 0 0 1 0 12 0 1352.7598 E5RI99;P62888;E5RJH3 E5RI99 45 56 RPL30 60S ribosomal protein L30 yes no 2 4.0479E-167 172.56 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 82023000 0 11355000 0 70668000 0 0 4991 342 5046 22266;22267 14764;14765 14764 2 LVILANNCPALRK MIRQGKAKLVILANNC NNCPALRKSEIEYYAM K L V R K S 2 1 2 0 1 0 0 0 0 1 3 1 0 0 1 0 0 0 0 1 0 13 1 1480.8548 E5RI99;P62888 E5RI99 45 57 RPL30 60S ribosomal protein L30 yes no 2;3 0 211.37 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 5 8 6 19 6 18754000000 12381000000 196330000 271000000 2937100000 2561000000 407450000 4992 342 5047 22268;22269;22270;22271;22272;22273;22274;22275;22276;22277;22278;22279;22280;22281;22282;22283;22284;22285;22286;22287;22288;22289;22290;22291;22292;22293;22294;22295;22296;22297;22298;22299;22300;22301;22302;22303;22304;22305;22306;22307;22308;22309;22310;22311;22312;22313;22314;22315;22316 14766;14767;14768;14769;14770;14771;14772;14773;14774;14775;14776;14777;14778;14779;14780;14781;14782;14783;14784;14785;14786;14787;14788;14789;14790;14791;14792;14793;14794;14795;14796;14797;14798;14799;14800;14801;14802;14803;14804;14805;14806 14772 40 LVLLTASK RKPRKFSKLVLLTASK LVLLTASKDSTKVAGA K L V S K D 1 0 0 0 0 0 0 0 0 0 3 1 0 0 0 1 1 0 0 1 0 8 0 843.54295 Q96CP2;I3L1Y9;I3L4I0 Q96CP2 42 49 FLYWCH2 FLYWCH family member 2 yes no 1;2 2.3809E-16 118.74 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 2 1 167000000 15793000 29167000 31940000 19113000 19163000 51826000 4993 683 5048 22317;22318;22319;22320;22321;22322;22323;22324 14807;14808;14809;14810;14811;14812 14807 6 LVLLTASKDSTK RKPRKFSKLVLLTASK TASKDSTKVAGAKRKG K L V T K V 1 0 0 1 0 0 0 0 0 0 3 2 0 0 0 2 2 0 0 1 0 12 1 1274.7446 Q96CP2;I3L1Y9;I3L4I0 Q96CP2 42 53 FLYWCH2 FLYWCH family member 2 yes no 2;3 4.5427E-79 145.81 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 1 2 2 154280000 42147000 14501000 35071000 18318000 18762000 25480000 4994 683 5049 22325;22326;22327;22328;22329;22330;22331;22332;22333;22334;22335;22336;22337 14813;14814;14815;14816;14817;14818;14819;14820;14821;14822;14823;14824;14825 14825 13 LVLNTAVPDRLPARER GTCYQQAKLVLNTAVP DRLPAREREMDVIRNF K L V E R E 2 3 1 1 0 0 1 0 0 0 3 0 0 0 2 0 1 0 0 2 0 16 2 1819.0428 Q99741 Q99741 162 177 CDC6 Cell division control protein 6 homolog yes yes 4 0.017537 40.941 By MS/MS By matching By matching By matching By matching By matching 1 8635700 8635700 0 0 0 0 0 4995 1431 5050 22338 14826 14826 1 LVLNYDPGDPK ALYISASRLVLNYDPG NYDPGDPKAFTEINRL R L V P K A 0 0 1 2 0 0 0 1 0 0 2 1 0 0 2 0 0 0 1 1 0 11 0 1229.6292 Q9HCI7 Q9HCI7 16 26 MSL2 E3 ubiquitin-protein ligase MSL2 yes yes 2 0.029444 68.786 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 4996 1520 5051 22339 14827 14827 1 LVLVGDGGTGK GEPQVQFKLVLVGDGG VGDGGTGKTTFVKRHL K L V G K T 0 0 0 1 0 0 0 4 0 0 2 1 0 0 0 0 1 0 0 2 0 11 0 1014.571 P62826;B5MDF5;F5H018;H0YFC6 P62826 13 23 RAN GTP-binding nuclear protein Ran yes no 2 2.2646E-05 104.07 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 80415000 19379000 0 9259300 8124700 18141000 25511000 4997 173 5052 22340;22341;22342;22343;22344;22345 14828;14829;14830;14831;14832 14830 5 LVMAGETTNSR EDCNILLKLVMAGETT AGETTNSRGQRLPQKG K L V S R G 1 1 1 0 0 0 1 1 0 0 1 0 1 0 0 1 2 0 0 1 0 11 0 1177.5761 F5GX68 F5GX68 1197 1207 DNMT1 Cytosine-specific methyltransferase no no 2 0.015842 58.592 By matching By matching By matching By matching By MS/MS By matching 1 1 1 3021900 0 394570 0 0 534900 2092400 4998 487 5053 22346;22347;22348 14833 14833 1 LVMDQISEAR QGNMQRCKLVMDQISE MDQISEARDSMLKVLD K L V A R D 1 1 0 1 0 1 1 0 0 1 1 0 1 0 0 1 0 0 0 1 0 10 0 1160.586 Q9H0E3;H7BXF5;Q9H0E3-3;Q9H0E3-2 Q9H0E3 1004 1013 SAP130 Histone deacetylase complex subunit SAP130 yes no 2 0.01406 68.786 By matching By matching By matching By matching By matching By MS/MS 1 1728500 0 0 0 0 0 1728500 4999 652 5054 22349 14834 14834 1 LVMESVTLPLETLVSPHEESISLCPEEQLVIER REESRPPKLVMESVTL EEQLVIERLQGEKEQK K L V E R L 0 1 0 0 1 1 7 0 1 2 6 0 1 0 3 4 2 0 0 4 0 33 0 3775.9264 Q8NEZ4;Q8NEZ4-3;H0YMU7 Q8NEZ4 687 719 KMT2C Histone-lysine N-methyltransferase 2C yes no 6 0.03482 15.598 By matching By matching By matching By matching By matching By MS/MS 1 4818500 0 0 0 0 0 4818500 5000 1324 5055 22350 14835 14835 1 LVNELTEFAK CPFDEHVKLVNELTEF NELTEFAKTCVADESH K L V A K T 1 0 1 0 0 0 2 0 0 0 2 1 0 1 0 0 1 0 0 1 0 10 0 1162.6234 CON__P02769 CON__P02769 66 75 yes yes 2 6.2302E-35 134.57 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 3 5023900000 76626000 2133100000 0 1259000000 1800700 1553400000 + 5001 294 5056 22351;22352;22353;22354;22355;22356;22357;22358;22359 14836;14837;14838;14839;14840;14841;14842 14842 7 LVNEVTEFAK CPFEDHVKLVNEVTEF NEVTEFAKTCVADESA K L V A K T 1 0 1 0 0 0 2 0 0 0 1 1 0 1 0 0 1 0 0 2 0 10 0 1148.6077 P02768;CON__P02768-1;E7ESU5;Q8IUK7;H7C013 P02768 66 75 ALB Serum albumin yes no 2 0.022902 73.9 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 759890 0 0 0 759890 0 0 + 5002 293 5057 22360;22361 14843;14844 14843 2 LVNSQCEFER SGGKLTRRLVNSQCEF NSQCEFERRKPDGTTT R L V E R R 0 1 1 0 1 1 2 0 0 0 1 0 0 1 0 1 0 0 0 1 0 10 0 1280.5819 Q9NPI1;Q9NPI1-2 Q9NPI1 333 342 BRD7 Bromodomain-containing protein 7 yes no 2 0.015635 67.385 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 5783000 611910 823850 816340 492020 1252700 1786200 5003 1529 5058 22362;22363;22364;22365;22366;22367 14845;14846;14847 14845 3 LVNTTITPEPEPKPQPNSR IASLVTAKLVNTTITP PKPQPNSREKAKTRGA K L V S R E 0 1 2 0 0 1 2 0 0 1 1 1 0 0 5 1 3 0 0 1 0 19 1 2117.1117 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 673 691 LUZP1 Leucine zipper protein 1 yes no 3 0.008391 42.58 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 6936600 0 1124500 1047900 0 354650 4409500 5004 1265 5059 22368;22369;22370;22371 14848 14848 1 LVPDPPNDLRK PTVTSSERLVPDPPND DPPNDLRKEDVAMELE R L V R K E 0 1 1 2 0 0 0 0 0 0 2 1 0 0 3 0 0 0 0 1 0 11 1 1262.6983 O95243-2 O95243-2 26 36 MBD4 Methyl-CpG-binding domain protein 4 no no 3 0.014986 51.762 By matching By matching By matching By MS/MS By matching By matching 1 1 1 3610000 1738000 0 598330 1273700 0 0 5005 769 5060 22372;22373;22374 14849 14849 1 LVPEAVGDQK SEKHSYGKLVPEAVGD PEAVGDQKALQEGEGD K L V Q K A 1 0 0 1 0 1 1 1 0 0 1 1 0 0 1 0 0 0 0 2 0 10 0 1054.5659 P49589;P49589-3;P49589-2;B4DKY1;A8MVQ3 P49589 286 295 CARS Cysteine--tRNA ligase, cytoplasmic yes no 2 4.0327E-05 109.44 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 2 2 2 2 2 2 76257000 16071000 6310100 6904500 10435000 24398000 12139000 5006 938 5061 22375;22376;22377;22378;22379;22380;22381;22382;22383;22384;22385;22386 14850;14851;14852;14853 14851 4 LVPGLQDSEEK VMQDIVYKLVPGLQDS GLQDSEEKRIREFYQS K L V E K R 0 0 0 1 0 1 2 1 0 0 2 1 0 0 1 1 0 0 0 1 0 11 0 1213.619 Q9BSM1-3;Q9BSM1 Q9BSM1-3 28 38 PCGF1 Polycomb group RING finger protein 1 yes no 2 0.028261 51.979 By matching By matching By matching By matching By MS/MS By matching 1 1 1 9481300 0 1424500 0 0 1755300 6301500 5007 1445 5062 22387;22388;22389 14854 14854 1 LVPLDYGEDDK DDVPRKRKLVPLDYGE LDYGEDDKNATKGTVN K L V D K N 0 0 0 3 0 0 1 1 0 0 2 1 0 0 1 0 0 0 1 1 0 11 0 1262.603 P49756 P49756 712 722 RBM25 RNA-binding protein 25 yes yes 2 0.026933 52.391 By matching By MS/MS By matching By matching By matching By matching 1 1 1695400 969990 725390 0 0 0 0 5008 942 5063 22390;22391 14855 14855 1 LVPLDYGEDDKNATKGTVNTEEK DDVPRKRKLVPLDYGE GTVNTEEKRKHIKSLI K L V E K R 1 0 2 3 0 0 3 2 0 0 2 3 0 0 1 0 3 0 1 2 0 23 2 2535.234 P49756 P49756 712 734 RBM25 RNA-binding protein 25 yes yes 4 0.000503 54.15 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 19264000 4847400 2917100 2825800 2652400 1538400 4482700 5009 942 5064 22392;22393;22394;22395;22396;22397 14856;14857 14856 2 LVQAFQFTDK RSVDETLRLVQAFQFT QAFQFTDKHGEVCPAG R L V D K H 1 0 0 1 0 2 0 0 0 0 1 1 0 2 0 0 1 0 0 1 0 10 0 1195.6237 Q06830 Q06830 159 168 PRDX1 Peroxiredoxin-1 yes yes 2 1.8897E-62 148.56 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1735600000 0 0 33972000 32557000 25086000 1644000000 5010 1044 5065 22398;22399;22400;22401 14858;14859;14860 14858 3 LVQAPLDADGDNVLQEK SHSVFNIKLVQAPLDA GDNVLQEKEQITISQL K L V E K E 2 0 1 3 0 2 1 1 0 0 3 1 0 0 1 0 0 0 0 2 0 17 0 1823.9265 Q02241-2;H7BYN4;Q02241;B4E1K0;H0YKQ5 Q02241-2 309 325 KIF23 Kinesin-like protein KIF23 yes no 2 2.7821E-21 101.78 By matching By MS/MS By matching By matching By matching By matching 1 15046000 0 15046000 0 0 0 0 5011 660 5066 22402 14861 14861 1 LVQDVANNTNEEAGDGTTTATVLAR KYKNIGAKLVQDVANN TTATVLARSIAKEGFE K L V A R S 4 1 3 2 0 1 2 2 0 0 2 0 0 0 0 0 5 0 0 3 0 25 0 2559.2413 P10809;B7Z712;C9JL25;E7EXB4;E7ESH4 P10809 97 121 HSPD1 60 kDa heat shock protein, mitochondrial yes no 2;3 1.3E-96 120.42 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 2 22785000 9530100 0 0 932990 0 12321000 5012 820 5067 22403;22404;22405;22406;22407 14862;14863;14864;14865;14866 14863 5 LVQHVVSQNCDGLHLR ITRLHEQKLVQHVVSQ NCDGLHLRSGLPRTAI K L V L R S 0 1 1 1 1 2 0 1 2 0 3 0 0 0 0 1 0 0 0 3 0 16 0 1873.9581 I3L480;I3L1C9;Q9NRC8 I3L480 11 26 SIRT7 NAD-dependent protein deacetylase sirtuin-7 yes no 3;4 1.0349E-64 130.02 By matching By matching By matching By matching By matching By MS/MS 1 1 2 2 21417000 0 2205900 1027700 0 2570900 15613000 5013 681 5068 22408;22409;22410;22411;22412;22413 14867;14868;14869 14869 3 LVRLKPEELVSK REEISLAKLVRLKPEE KPEELVSKELSTWKER K L V S K E 0 1 0 0 0 0 2 0 0 0 3 2 0 0 1 1 0 0 0 2 0 12 2 1409.8606 Q9BTC0;Q9BTC0-1 Q9BTC0 754 765 DIDO1 Death-inducer obliterator 1 yes no 3 4.696E-10 107.09 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 6107200 0 2134700 2438200 0 0 1534300 5014 1447 5069 22414;22415;22416 14870;14871 14871 2 LVRVIDQEMQAIGGQK YTVRAMEKLVRVIDQE MQAIGGQKVNMPSLSP K L V Q K V 1 1 0 1 0 3 1 2 0 2 1 1 1 0 0 0 0 0 0 2 0 16 1 1783.9615 Q7L3T8 Q7L3T8 101 116 PARS2 Probable proline--tRNA ligase, mitochondrial yes yes 3 2.0988E-50 120.54 By matching By MS/MS By matching By matching By matching By matching 1 16177000 0 16177000 0 0 0 0 5015 1245 5070 22417 14872 14872 1 LVSDSLSEHEK SITERALKLVSDSLSE DSLSEHEKNKNKEGDD K L V E K N 0 0 0 1 0 0 2 0 1 0 2 1 0 0 0 3 0 0 0 1 0 11 0 1242.6092 Q96KR1;B5MEH6;H0Y8W1 Q96KR1 757 767 ZFR Zinc finger RNA-binding protein yes no 2;3 0.0004345 95.618 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 2 21974000 2249200 5934900 1491900 1154300 4253600 6889900 5016 1403 5071 22418;22419;22420;22421;22422;22423;22424;22425;22426;22427;22428 14873;14874;14875;14876;14877;14878;14879 14875 7 LVSDSLSEHEKNKNK SITERALKLVSDSLSE EHEKNKNKEGDDKKEG K L V N K E 0 0 2 1 0 0 2 0 1 0 2 3 0 0 0 3 0 0 0 1 0 15 2 1726.885 Q96KR1;B5MEH6;H0Y8W1 Q96KR1 757 771 ZFR Zinc finger RNA-binding protein yes no 3;4 1.8953E-05 89.46 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 16681000 2354100 3739100 2930800 1286000 2192700 4178700 5017 1403 5072 22429;22430;22431;22432;22433;22434;22435;22436;22437;22438;22439;22440 14880;14881;14882;14883;14884;14885;14886;14887;14888 14883 9 LVSEKVDDYEHAAK YPANESSKLVSEKVDD DDYEHAAKYMKNSQVR K L V A K Y 2 0 0 2 0 0 2 0 1 0 1 2 0 0 0 1 0 0 1 2 0 14 1 1602.789 O43148;O43148-2;F5H2D9 O43148 429 442 RNMT mRNA cap guanine-N7 methyltransferase yes no 3;4 8.682E-21 112.44 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 2 2 2 2 2 50750000 8331600 5473400 8316200 13322000 9429800 5877600 5018 709 5073 22441;22442;22443;22444;22445;22446;22447;22448;22449;22450;22451;22452;22453 14889;14890;14891;14892;14893;14894;14895;14896;14897;14898;14899 14899 11 LVSLIGSK DRPLPVSRLVSLIGSK LVSLIGSKTQIPTQRY R L V S K T 0 0 0 0 0 0 0 1 0 1 2 1 0 0 0 2 0 0 0 1 0 8 0 815.51165 P25786;P25786-2;F5GX11 P25786 108 115 PSMA1 Proteasome subunit alpha type-1 yes no 2 0.034579 69.812 By matching By matching By matching By matching By matching By MS/MS 1 2066100 0 0 0 0 0 2066100 5019 876 5074 22454 14900 14900 1 LVSLIGSKTQIPTQR DRPLPVSRLVSLIGSK KTQIPTQRYGRRPYGV R L V Q R Y 0 1 0 0 0 2 0 1 0 2 2 1 0 0 1 2 2 0 0 1 0 15 1 1639.9621 P25786;P25786-2;F5GX11 P25786 108 122 PSMA1 Proteasome subunit alpha type-1 yes no 3 0.00074005 75.483 By matching By MS/MS By matching By matching By matching By matching 1 1 2454500 0 1980400 0 474110 0 0 5020 876 5075 22455;22456 14901 14901 1 LVSQIEDAMRK RSTAFRQKLVSQIEDA QIEDAMRKAGVAHSKS K L V R K A 1 1 0 1 0 1 1 0 0 1 1 1 1 0 0 1 0 0 0 1 0 11 1 1288.6809 Q96RN5-3;Q96RN5-2;Q96RN5;F8WDM6;F2Z2B7 Q96RN5-3 19 29 MED15 Mediator of RNA polymerase II transcription subunit 15 yes no 3 0.0092973 57.174 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3999300 0 702280 601410 0 824510 1871100 5021 1418 5076 22457;22458;22459;22460 14902 14902 1 LVSSHKPVQNQKQK RVPLQAQKLVSSHKPV PVQNQKQKQLQATSVP K L V Q K Q 0 0 1 0 0 3 0 0 1 0 1 3 0 0 1 2 0 0 0 2 0 14 2 1619.9107 O14965;A3KFJ0;Q5QPD4;A3KFJ1;Q5QPD2;Q5QPD1;A3KFJ2 O14965 64 77 AURKA Aurora kinase A yes no 4 0.031147 40.373 By matching By matching By matching By matching By matching By MS/MS 1 1 1111800 0 0 0 327250 0 784540 5022 698 5077 22461;22462 14903 14903 1 LVTDLTK AEFVEVTKLVTDLTKV KLVTDLTKVHKECCHG K L V T K V 0 0 0 1 0 0 0 0 0 0 2 1 0 0 0 0 2 0 0 1 0 7 0 788.46437 CON__P02769;P02768;CON__P02768-1;E7ESU5;H0YA55;D6RHD5;B7WNR0;P02768-2;C9JKR2 CON__P02769 257 263 ALB Serum albumin no no 1 0.023471 58.604 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 54539000 8064100 10083000 0 3862800 0 32528000 + 5023 294;293 5078 22463;22464;22465;22466 14904 14904 1 LVTLRNVSTK TAKGGVGKLVTLRNVS TLRNVSTKKIPTVNRI K L V T K K 0 1 1 0 0 0 0 0 0 0 2 1 0 0 0 1 2 0 0 2 0 10 1 1129.6819 Q8IX01-4;Q8IX01-3;Q8IX01 Q8IX01-4 244 253 SUGP2 SURP and G-patch domain-containing protein 2 yes no 2 0.024972 75.416 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 6772300 529040 653360 1222800 599520 670910 3096700 5024 1284 5079 22467;22468;22469;22470;22471;22472 14905 14905 1 LVTSGAESGNLNTSPSSNQTRNSEK DSFKQLAKLVTSGAES NQTRNSEKFEKPENEI K L V E K F 1 1 4 0 0 1 2 2 0 0 2 1 0 0 1 6 3 0 0 1 0 25 1 2577.2267 Q8NHV4-2;Q8NHV4;G3V3F1 Q8NHV4-2 414 438 NEDD1 Protein NEDD1 yes no 3 9.073E-05 56.29 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 5567000 1266700 1579000 0 1233700 1487600 0 5025 585 5080 22473;22474;22475;22476 14906;14907;14908;14909 14907 4 LVVPASQCGSLIGK SRPPVTLRLVVPASQC QCGSLIGKGGCKIKEI R L V G K G 1 0 0 0 1 1 0 2 0 1 2 1 0 0 1 2 0 0 0 2 0 14 0 1427.7806 F8VZX2;Q15366-4;Q15366-5;Q15366-3;Q15366;Q15366-2;H3BRU6;G3V0E8;B4DXP5;B4DRD7;F8W0G4;B4DLC0;F8VRG9;F8VXH9;F8W1G6;F8VWQ4;P57721-2;P57721-3;P57721-5;E9PFP8;P57721-4;P57721;H9KV40;H3BND9 F8VZX2 102 115 PCBP2;PCBP3 Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 yes no 2 0.0011065 74.475 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 109520000 0 73173000 0 0 0 36347000 5026 548 5081 22477;22478 14910;14911 14911 2 LVVPASQCGSLIGKGGCK SRPPVTLRLVVPASQC LIGKGGCKIKEIREST R L V C K I 1 0 0 0 2 1 0 4 0 1 2 2 0 0 1 2 0 0 0 2 0 18 1 1829.9492 F8VZX2;Q15366-4;Q15366-5;Q15366-3;Q15366;Q15366-2;H3BRU6;G3V0E8;B4DXP5;B4DRD7;F8W0G4;B4DLC0;F8VRG9;F8VXH9;F8W1G6;F8VWQ4;H3BND9 F8VZX2 102 119 PCBP2 Poly(rC)-binding protein 2 yes no 3 0.0014969 66.826 By matching By MS/MS By matching By matching By matching By matching 1 1 1 10905000 0 7447800 2481000 976330 0 0 5027 548 5082 22479;22480;22481 14912 14912 1 LVVPATQCGSLIGKGGCK SRPPVTLRLVVPATQC LIGKGGCKIKEIREST R L V C K I 1 0 0 0 2 1 0 4 0 1 2 2 0 0 1 1 1 0 0 2 0 18 1 1843.9648 Q15365 Q15365 102 119 PCBP1 Poly(rC)-binding protein 1 yes yes 3 0.00165 57.936 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 45897000 11354000 12030000 0 386920 0 22126000 5028 1135 5083 22482;22483;22484;22485 14913;14914;14915 14913 2 LVVPATQCGSLIGKGGCKIK SRPPVTLRLVVPATQC GKGGCKIKEIRESTGA R L V I K E 1 0 0 0 2 1 0 4 0 2 2 3 0 0 1 1 1 0 0 2 0 20 2 2085.1439 Q15365 Q15365 102 121 PCBP1 Poly(rC)-binding protein 1 yes yes 4 0.0022413 49.425 By matching By matching By MS/MS By matching By matching By matching 1 1 7529200 0 0 6908000 0 621110 0 5029 1135 5084 22486;22487 14916 14916 1 LVVQIDNAK CTKSENARLVVQIDNA VVQIDNAKLAADDFRT R L V A K L 1 0 1 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 2 0 9 0 998.57605 Q15323;CON__Q9UE12;CON__Q15323;CON__A2A5Y0;Q14525;CON__Q14525;CON__Q497I4;CON__REFSEQ:XP_986630;CON__Q9D646;O76009;CON__Q6NTB9;CON__O76009 Q15323 127 135 KRT31;KRT33B;KRT33A Keratin, type I cuticular Ha1;Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha3-I yes no 2 0.012883 80.688 By matching By matching By matching By MS/MS By matching By matching 1 673180 0 0 0 673180 0 0 + 5030 281 5085 22488 14917;14918 14918 2 LVVSTQTALA CFAVEGPKLVVSTQTA VSTQTALA________ K L V L A - 2 0 0 0 0 1 0 0 0 0 2 0 0 0 0 1 2 0 0 2 0 10 0 1001.5757 CON__P02769 CON__P02769 598 607 yes yes 1;2 0.011776 70.816 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 50953000 4346100 5210500 12150000 0 20269000 8977400 + 5031 294 5086 22489;22490;22491;22492;22493 14919;14920;14921;14922 14920 4 LWDPRTPCNAGTFSQPEK GSWDQTVKLWDPRTPC GTFSQPEKVYTLSVSG K L W E K V 1 1 1 1 1 1 1 1 0 0 1 1 0 1 3 1 2 1 0 0 0 18 1 2102.9844 O43684-2;O43684;B4DDM6 O43684-2 122 139 BUB3 Mitotic checkpoint protein BUB3 yes no 3 1.4538E-110 140.75 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 180220000 27018000 17554000 25495000 8249700 24502000 77400000 5032 719 5087 22494;22495;22496;22497;22498;22499 14923;14924;14925;14926;14927;14928;14929 14924 7 LWFTPTPHNDK LVNETFQKLWFTPTPH TPTPHNDKEAMTRKIL K L W D K E 0 0 1 1 0 0 0 0 1 0 1 1 0 1 2 0 2 1 0 0 0 11 0 1354.667 Q6KC79-2;Q6KC79 Q6KC79-2 1913 1923 NIPBL Nipped-B-like protein yes no 3 0.005001 70.728 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 5609400 0 0 0 802640 912640 3894100 5033 1222 5088 22500;22501;22502 14930;14931;14932 14931 3 LWSWGRNEK LLITTEGKLWSWGRNE WSWGRNEKGQLGHGDT K L W E K G 0 1 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 2 0 0 0 9 1 1174.5883 Q9P258 Q9P258 171 179 RCC2 Protein RCC2 yes yes 2 0.015432 104.2 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 2 18786000 0 1831700 2582400 3628500 346710 10397000 5034 1575 5089 22503;22504;22505;22506;22507;22508 14933;14934;14935 14933 3 LWSWGRNEKGQLGHGDTK LLITTEGKLWSWGRNE QLGHGDTKRVEAPRLI K L W T K R 0 1 1 1 0 1 1 4 1 0 2 2 0 0 0 1 1 2 0 0 0 18 2 2068.0239 Q9P258 Q9P258 171 188 RCC2 Protein RCC2 yes yes 4 0.00096156 68.329 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 83928000 16554000 0 13008000 11043000 7828800 35495000 5035 1575 5090 22509;22510;22511;22512;22513 14936;14937;14938 14937 3 LWTLVSEQTRVNAAKNK CPTVNLDKLWTLVSEQ RVNAAKNKTGAAPIID K L W N K T 2 1 2 0 0 1 1 0 0 0 2 2 0 0 0 1 2 1 0 2 0 17 2 1957.0745 E9PJD9;P46776;E9PLL6 E9PJD9 21 37 RPL27A 60S ribosomal protein L27a yes no 3 0.006329 60.55 By MS/MS By matching By matching By matching By matching By matching 1 4508300 4508300 0 0 0 0 0 5036 447 5091 22514 14939 14939 1 LWVSSLEK SRCRQKRKLWVSSLEK LWVSSLEKKAEELTSQ K L W E K K 0 0 0 0 0 0 1 0 0 0 2 1 0 0 0 2 0 1 0 1 0 8 0 960.52803 P17544-4;P17544-2;P17544-3;P17544-6;P17544 P17544-4 179 186 ATF7 Cyclic AMP-dependent transcription factor ATF-7 yes no 2 0.014732 87.639 By matching By MS/MS By matching By matching By matching By matching 1 1 5086100 0 3609500 0 1476600 0 0 5037 850 5092 22515;22516 14940 14940 1 LYCICKTPYDESK KETKKDTKLYCICKTP KTPYDESKFYIGCDRC K L Y S K F 0 0 0 1 2 0 1 0 0 1 1 2 0 0 1 1 1 0 2 0 0 13 1 1675.7586 Q12830-4;Q12830-2;Q12830;E9PE19 Q12830-4 2725 2737 BPTF Nucleosome-remodeling factor subunit BPTF yes no 3 0.0022755 81.239 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 2 11218000 1832300 0 1108600 928560 1533600 5815400 5038 1061 5093 22517;22518;22519;22520;22521;22522;22523 14941;14942;14943;14944;14945;14946 14942 6 LYDEGDPSEK IGNRCHPKLYDEGDPS DEGDPSEKLELVTGTN K L Y E K L 0 0 0 2 0 0 2 1 0 0 1 1 0 0 1 1 0 0 1 0 0 10 0 1151.4982 Q96RE7 Q96RE7 359 368 NACC1 Nucleus accumbens-associated protein 1 yes yes 2 0.0086818 80.102 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 6596200 0 1191400 3580300 203600 0 1620900 5039 1417 5094 22524;22525;22526;22527 14947;14948 14948 2 LYDVPANSMR SSWDTSVRLYDVPANS DVPANSMRLKYQHTGA R L Y M R L 1 1 1 1 0 0 0 0 0 0 1 0 1 0 1 1 0 0 1 1 0 10 0 1164.5597 O43684-2;O43684 O43684-2 41 50 BUB3 Mitotic checkpoint protein BUB3 yes no 2 0.0095763 75.566 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 9945600 832630 1292800 913840 903220 0 6003200 5040 719 5095 22528;22529;22530;22531;22532 14949;14950 14950 2 LYEMVSYCQNISK MENVGQQKLYEMVSYC SYCQNISKCRRVLMAQ K L Y S K C 0 0 1 0 1 1 1 0 0 1 1 1 1 0 0 2 0 0 2 1 0 13 0 1633.748 P46063 P46063 440 452 RECQL ATP-dependent DNA helicase Q1 yes yes 2 0.0011454 90.412 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 26891000 0 8190600 0 5247600 0 13453000 5041 922 5096 22533;22534;22535 14951;14952;14953 14952 3 LYGAQFHPEVGLTENGK GIANESKKLYGAQFHP VGLTENGKVILKNFLY K L Y G K V 1 0 1 0 0 1 2 3 1 0 2 1 0 1 1 0 1 0 1 1 0 17 0 1858.9214 F8W720;B4DUT7;P49915 F8W720 85 101 GMPS GMP synthase [glutamine-hydrolyzing] yes no 3 1.9102E-21 102.72 By matching By matching By matching By matching By matching By MS/MS 1 34149000 0 0 0 0 0 34149000 5042 129 5097 22536 14954 14954 1 LYGDADYLEER TKNSVMRKLYGDADYL DADYLEERHRHRFEVN K L Y E R H 1 1 0 2 0 0 2 1 0 0 2 0 0 0 0 0 0 0 2 0 0 11 0 1342.6041 P17812;B4DR64 P17812 467 477 CTPS1 CTP synthase 1 yes no 2 0.010653 64.121 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 4677100 0 1580600 0 607320 0 2489200 5043 852 5098 22537;22538;22539 14955;14956 14955 2 LYGNDFSQTTISR DVGLAMGKLYGNDFSQ FSQTTISRFEALNLSF K L Y S R F 0 1 1 1 0 1 0 1 0 1 1 0 0 1 0 2 2 0 1 0 0 13 0 1500.7209 H0YLB5;P14859-4;P14859-5;P14859-3;P14859;P14859-2;H0YLC5;E9PQI0;H0YNL2;E9PIN6;P09086-4;H0YNW1;Q9UKI9-3;Q9UKI9;Q9UKI9-2;P09086-3;P09086-2;P09086;H0YLL6;E9PNC9;P09086-5;B5ME60;H0YKT2 H0YLB5 339 351 POU2F1;POU2F3;POU2F2 POU domain, class 2, transcription factor 1;POU domain, class 2, transcription factor 2;POU domain, class 2, transcription factor 3 yes no 2 0.018793 49.298 By matching By matching By matching By matching By matching By MS/MS 1 1 1943400 0 308640 0 0 0 1634800 5044 627 5099 22540;22541 14957 14957 1 LYGSAGPPPTGEEDTAEKDEL IVQPIISKLYGSAGPP DTAEKDEL________ K L Y E L - 2 0 0 2 0 0 4 3 0 0 2 1 0 0 3 1 2 0 1 0 0 21 1 2174.9855 P11021 P11021 634 654 HSPA5 78 kDa glucose-regulated protein yes yes 2 0.0090866 46.925 By MS/MS By matching By matching By matching By matching By matching 1 1801300 1801300 0 0 0 0 0 5045 823 5100 22542 14958 14958 1 LYGYFHDATR LRHPNILRLYGYFHDA GYFHDATRVYLILEYA R L Y T R V 1 1 0 1 0 0 0 1 1 0 1 0 0 1 0 0 1 0 2 0 0 10 0 1241.5829 O14965;A3KFJ0;Q5QPD4 O14965 196 205 AURKA Aurora kinase A yes no 3 0.0041466 87.258 By matching By matching By matching By matching By matching By MS/MS 1 2051700 0 0 0 0 0 2051700 5046 698 5101 22543 14959 14959 1 LYHNEVEIEK QVQLQLFKLYHNEVEI HNEVEIEKLNKELASK K L Y E K L 0 0 1 0 0 0 3 0 1 1 1 1 0 0 0 0 0 0 1 1 0 10 0 1272.635 Q14683;H0Y7K8 Q14683 228 237 SMC1A Structural maintenance of chromosomes protein 1A yes no 3 0.0065611 83.883 By matching By MS/MS By matching By matching By matching By matching 1 1 1 5115700 0 1539500 0 985690 0 2590500 5047 1110 5102 22544;22545;22546 14960 14960 1 LYHNEVEIEKLNK QVQLQLFKLYHNEVEI VEIEKLNKELASKNKE K L Y N K E 0 0 2 0 0 0 3 0 1 1 2 2 0 0 0 0 0 0 1 1 0 13 1 1627.857 Q14683;H0Y7K8 Q14683 228 240 SMC1A Structural maintenance of chromosomes protein 1A yes no 3 0.027833 60.196 By matching By matching By matching By matching By matching By MS/MS 1 1 2727200 0 1156600 0 0 0 1570500 5048 1110 5103 22547;22548 14961 14961 0 LYKDNQGNLKGDGLCCYLK QTEEFKVKLYKDNQGN DGLCCYLKRESVELAL K L Y L K R 0 0 2 2 2 1 0 3 0 0 4 3 0 0 0 0 0 0 2 0 0 19 2 2258.0824 O43719;E9PFP2;Q5H919;Q5H918 O43719 172 190 HTATSF1 HIV Tat-specific factor 1 yes no 4 0.033573 33.872 By matching By MS/MS By matching By matching By matching By matching 1 1 1562500 0 1300800 0 0 0 261730 5049 720 5104 22549;22550 14962 14962 1 LYKNKDMIQTLTNK DVAPFEVRLYKNKDMI MIQTLTNKSKIQNVGG R L Y N K S 0 0 2 1 0 1 0 0 0 1 2 3 1 0 0 0 2 0 1 0 0 14 2 1708.9182 Q9UNG2 Q9UNG2 139 152 TNFSF18 Tumor necrosis factor ligand superfamily member 18 yes yes 3 0.032203 61.03 By matching By MS/MS By matching By matching By matching By matching 1 13091000 0 13091000 0 0 0 0 5050 1615 5105 22551 14963 14963 179 1 LYLADPMK EFSRAAEKLYLADPMK LYLADPMKARVVLKYR K L Y M K A 1 0 0 1 0 0 0 0 0 0 2 1 1 0 1 0 0 0 1 0 0 8 0 949.49429 P49458;E9PE20;P49458-2 P49458 17 24 SRP9 Signal recognition particle 9 kDa protein yes no 2 0.017081 82.279 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 2 41495000 3754000 0 10318000 0 3486900 23936000 5051 937 5106 22552;22553;22554;22555;22556 14964;14965 14965 2 LYLADPMKAR EFSRAAEKLYLADPMK LADPMKARVVLKYRHS K L Y A R V 2 1 0 1 0 0 0 0 0 0 2 1 1 0 1 0 0 0 1 0 0 10 1 1176.6325 P49458;E9PE20;P49458-2 P49458 17 26 SRP9 Signal recognition particle 9 kDa protein yes no 2 0.010146 88.495 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 25741000 3622600 0 7256600 2854100 305470 11702000 5052 937 5107 22557;22558;22559;22560;22561 14966;14967;14968 14967 3 LYLIDLAGSEDNRRTGNK PFRQREGKLYLIDLAG DNRRTGNKGLRLKESG K L Y N K G 1 2 2 2 0 0 1 2 0 1 3 1 0 0 0 1 1 0 1 0 0 18 2 2034.0494 Q14807;B7Z265;H3BRB3 Q14807 270 287 KIF22 Kinesin-like protein KIF22 yes no 3;4 0.0058401 54.09 By matching By matching By MS/MS By MS/MS By matching By matching 1 2 67074000 0 0 54664000 12409000 0 0 5053 1115 5108 22562;22563;22564 14969;14970;14971 14969 3 LYNFCNSSCVAK QATMPDGKLYNFCNSS CNSSCVAKFQALSMQS K L Y A K F 1 0 2 0 2 0 0 0 0 0 1 1 0 1 0 2 0 0 1 1 0 12 0 1461.6381 Q9UBW7 Q9UBW7 604 615 ZMYM2 Zinc finger MYM-type protein 2 yes yes 2 0.0018566 84.169 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4295200 798760 1069600 0 561400 0 1865400 5054 1585 5109 22565;22566;22567;22568 14972 14972 1 LYQDTHQEYAR EEKKSSLKLYQDTHQE DTHQEYARVKEECLKS K L Y A R V 1 1 0 1 0 2 1 0 1 0 1 0 0 0 0 0 1 0 2 0 0 11 0 1422.6528 Q9Y2F5 Q9Y2F5 108 118 KIAA0947 Uncharacterized protein KIAA0947 yes yes 3 0.015748 56.551 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 2565800 446400 340090 0 363790 644550 770920 5055 1632 5110 22569;22570;22571;22572;22573 14973 14973 1 LYQKPEGNHIIK LQKKRRIKLYQKPEGN PEGNHIIKVGIYLLEA K L Y I K V 0 0 1 0 0 1 1 1 1 2 1 2 0 0 1 0 0 0 1 0 0 12 1 1438.7932 Q149N8-5;F8WEL0;Q149N8-2;Q149N8-4;Q149N8;H7C2W2 Q149N8-5 200 211 SHPRH E3 ubiquitin-protein ligase SHPRH yes no 3 0.020399 51.979 By matching By matching By matching By matching By matching By MS/MS 1 900520 0 0 0 0 0 900520 5056 572 5111 22574 14974 14974 1 LYRETNEPVKTK ALKPPPIKLYRETNEP TNEPVKTKTRTFNTST K L Y T K T 0 1 1 0 0 0 2 0 0 0 1 2 0 0 1 0 2 0 1 1 0 12 2 1476.7936 B1AHC9;B1AHC8;P12956;F5H1I8;B1AHC7 B1AHC9 238 249 XRCC6 X-ray repair cross-complementing protein 6 yes no 3 0.01252 66.393 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 4507700 0 0 836250 618440 1340700 1712300 5057 60 5112 22575;22576;22577;22578 14975;14976 14975 2 LYRPGSVAYVSR LDNILASKLYRPGSVA GSVAYVSRSGGMSNEL K L Y S R S 1 2 0 0 0 0 0 1 0 0 1 0 0 0 1 2 0 0 2 2 0 12 1 1366.7357 B4E3P0;P53396-2;P53396;E7ENH9 B4E3P0 380 391 ACLY ATP-citrate synthase yes no 3 0.0034218 70.563 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 12556000 1051800 2238400 827260 0 3961700 4476800 5058 168 5113 22579;22580;22581;22582;22583 14977;14978 14977 2 LYSENEGMASNQGK ________________ GMASNQGKMENEEQPQ K L Y G K M 1 0 2 0 0 1 2 2 0 0 1 1 1 0 0 2 0 0 1 0 0 14 0 1526.6671 D6RHZ1;D6RIH3;D6RCE9;D6RD44;Q96EI5;Q96EI5-2 D6RHZ1 4 17 TCEAL4 Transcription elongation factor A protein-like 4 yes no 2 0.0027679 62.287 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2668100 0 652840 0 270450 0 1744900 5059 324 5114 22584;22585;22586 14979;14980 14980 2 LYSTIRPYLESK ADEAAISKLYSTIRPY IRPYLESKAHGVQKKA K L Y S K A 0 1 0 0 0 0 1 0 0 1 2 1 0 0 1 2 1 0 2 0 0 12 1 1468.7926 Q5JTH9-2;E9PCK7;Q5JTH9;F5H456 Q5JTH9-2 672 683 RRP12 RRP12-like protein yes no 2;3 9.0694E-141 164.48 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 2 1 1 1 1 48554000 14577000 2721400 11993000 2579100 7392800 9290700 5060 414 5115 22587;22588;22589;22590;22591;22592;22593 14981;14982;14983;14984 14984 4 LYTEDEFEK EDSGICYRLYTEDEFE YTEDEFEKFDKMTVPE R L Y E K F 0 0 0 1 0 0 3 0 0 0 1 1 0 1 0 0 1 0 1 0 0 9 0 1172.5237 Q9H6R0;Q9H6R0-2;I3L1L6;Q05BE5 Q9H6R0 417 425 DHX33 Putative ATP-dependent RNA helicase DHX33 yes no 2 0.00032084 111.61 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 2 14779000 0 1872200 1727400 560050 3181800 7437700 5061 1496 5116 22594;22595;22596;22597;22598;22599;22600 14985;14986;14987 14986 3 LYTGPGLAIHCMQVHK KCHICHKKLYTGPGLA IHCMQVHKETIDAVPN K L Y H K E 1 0 0 0 1 1 0 2 2 1 2 1 1 0 1 0 1 0 1 1 0 16 0 1823.9175 A8MTG3;O43670-2;O43670;E1P660;H0Y3M2 A8MTG3 44 59 ZNF207 Zinc finger protein 207 yes no 3;4 8.3703E-98 139.78 By matching By MS/MS By matching By MS/MS By matching By MS/MS 2 2 1 35760000 0 18907000 0 6268400 0 10585000 5062 40 5117 22601;22602;22603;22604;22605 14988;14989;14990;14991 14989 4 MAAAGGGGGGGRYYGGGSEGGRAPK RRSGAMVKMAAAGGGG SEGGRAPKRLKTDNAG K M A P K R 4 2 0 0 0 0 1 12 0 0 0 1 1 0 1 1 0 0 2 0 0 25 2 2197.0083 P14866 P14866 35 59 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 3;4 1.2181E-12 70.555 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 8 4 4 4 5 4 1209500000 189180000 94208000 271680000 243450000 214390000 196590000 5063 838 5118;5119 22606;22607;22608;22609;22610;22611;22612;22613;22614;22615;22616;22617;22618;22619;22620;22621;22622;22623;22624;22625;22626;22627;22628;22629;22630;22631;22632;22633;22634 14992;14993;14994;14995;14996;14997;14998;14999;15000;15001;15002;15003;15004;15005;15006;15007 14997 87 16 MAAHTMGNATVGR EAAFDEVKMAAHTMGN MGNATVGRRYLWLKDC K M A G R R 3 1 1 0 0 0 0 2 1 0 0 0 2 0 0 0 2 0 0 1 0 13 0 1315.6125 P42166 P42166 638 650 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 3 0.004334 61.03 By matching By matching By matching By matching By MS/MS By MS/MS 1 2 1 2095300 0 462810 0 0 663380 969100 5064 913 5120 22635;22636;22637;22638 15008;15009 15009 2 MAAHTMGNATVGRR EAAFDEVKMAAHTMGN GNATVGRRYLWLKDCK K M A R R Y 3 2 1 0 0 0 0 2 1 0 0 0 2 0 0 0 2 0 0 1 0 14 1 1471.7136 P42166 P42166 638 651 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 3 0.0021762 58.04 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 36090000 0 5329200 6782100 2735100 8159800 13084000 5065 913 5121 22639;22640;22641;22642;22643 15010;15011 15010 2 MAAMKEKPAENTLFK MDAEKVEKMAAMKEKP PAENTLFKAYPNKGVG K M A F K A 3 0 1 0 0 0 2 0 0 0 1 3 2 1 1 0 1 0 0 0 0 15 2 1707.8688 Q14966-3;Q14966;Q14966-5;F5H6M8;E7EUZ3 Q14966-3 1346 1360 ZNF638 Zinc finger protein 638 yes no 3 0.02654 63.181 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 5066 1118 5122 22644 15012 15012 1 MAAPIDRVGQTIER GMGFGLERMAAPIDRV RVGQTIERMGSGVERM R M A E R M 2 2 0 1 0 1 1 1 0 2 0 0 1 0 1 0 1 0 0 1 0 14 1 1555.8141 P52272-2;P52272;Q59ES8;F5H7Z1 P52272-2 458 471 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 3 0.018115 46.159 By matching By matching By matching By matching By matching By MS/MS 1 1 9190000 0 0 0 1337000 0 7853000 5067 956 5123 22645;22646 15013 15013 1 MAAQSAPKVVLK ________________ SAPKVVLKSTTKMSLN - M A L K S 3 0 0 0 0 1 0 0 0 0 1 2 1 0 1 1 0 0 0 2 0 12 1 1241.7166 Q9Y3Y2-4;Q9Y3Y2;Q9Y3Y2-3 Q9Y3Y2-4 1 12 CHTOP Chromatin target of PRMT1 protein yes no 3 0.0073405 61.958 By MS/MS By matching By matching By MS/MS By matching By matching 2 1 1 1 1 6496100 2255000 0 909840 2324500 635690 371090 5068 1649 5124 22647;22648;22649;22650;22651;22652 15014;15015 15015 2 MAECEAENEDLLKK LLEYYQKKMAECEAEN ENEDLLKKLELYKEAC K M A K K L 2 0 1 1 1 0 4 0 0 0 2 2 1 0 0 0 0 0 0 0 0 14 1 1678.7542 F5H0W5;Q9BR77-2;Q9BR77;F5H5Q8 F5H0W5 34 47 CCDC77 Coiled-coil domain-containing protein 77 yes no 3 0.030249 35.657 By matching By MS/MS By matching By matching By matching By matching 1 1 1056800 0 609760 446990 0 0 0 5069 506 5125 22653;22654 15016 15016 1 MAECYTMLKQDK SEIEVKYKMAECYTML YTMLKQDKDAIAILDG K M A D K D 1 0 0 1 1 1 1 0 0 0 1 2 2 0 0 0 1 0 1 0 0 12 1 1516.6724 Q9UJX3-2;Q9UJX3;F8VYX8 Q9UJX3-2 142 153 ANAPC7 Anaphase-promoting complex subunit 7 yes no 3 0.039592 44.829 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 3046600 728770 1070300 0 374290 873180 0 5070 1599 5126 22655;22656;22657;22658 15017 15017 1 MAEESSSSSSSSSPTAATSQQQQLKNK EFVGFDAKMAEESSSS QQQQLKNKSILISSVA K M A N K S 3 0 1 0 0 4 2 0 0 0 1 2 1 0 1 10 2 0 0 0 0 27 1 2785.2672 Q13620-1;Q13620 Q13620-1 116 142 CUL4B Cullin-4B yes no 3 0.003552 36.935 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 3133400 0 625960 1422400 0 0 1085000 5071 1090 5127 22659;22660;22661 15018;15019 15018 2 MAEPFTK YAPEMLAKMAEPFTKA KMAEPFTKALDMLDAE K M A T K A 1 0 0 0 0 0 1 0 0 0 0 1 1 1 1 0 1 0 0 0 0 7 0 822.39458 C9J4N8;Q9HAV4;E7EQN7;E7EQK9 C9J4N8 423 429 XPO5 Exportin-5 yes no 2 0.0067682 94.662 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 8720900 1183100 1635900 1733100 0 1456600 2712100 5072 227 5128 22662;22663;22664;22665;22666 15020;15021 15020 2 MAFTCSFCK EKYGDGYRMAFTCSFC AFTCSFCKFRTFEEKD R M A C K F 1 0 0 0 2 0 0 0 0 0 0 1 1 2 0 1 1 0 0 0 0 9 0 1150.461 Q5BKZ1;Q5BKZ1-3 Q5BKZ1 310 318 ZNF326 DBIRD complex subunit ZNF326 yes no 2 0.0078535 97.635 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 5366500 2299500 519390 0 0 0 2547600 5073 1177 5129 22667;22668;22669 15022;15023 15022 2 MALNHPYFNDLDNQIK PAKRISGKMALNHPYF NDLDNQIKKM______ K M A I K K 1 0 3 2 0 1 0 0 1 1 2 1 1 1 1 0 0 0 1 0 0 16 0 1931.92 P06493;P06493-2 P06493 280 295 CDK1 Cyclin-dependent kinase 1 yes no 3 3.656E-18 103.14 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 2 25767000 0 0 6305400 15922000 3540000 0 5074 799 5130;5131 22670;22671;22672;22673 15024;15025;15026;15027 15025 79 4 MAMEMRLPVARK ________________ MRLPVARKPLSERLGR - M A R K P 2 2 0 0 0 0 1 0 0 0 1 1 3 0 1 0 0 0 0 1 0 12 2 1431.7513 A3KFL1;A3KFL4;B4DKK6;A3KFL5;A3KFL2;Q13868 A3KFL1 1 12 EXOSC2 Exosome complex component RRP4 yes no 3 0.012556 43.958 By matching By matching By matching By matching By MS/MS By matching 1 8887100 0 0 0 0 8887100 0 5075 10 5132 22674 15028 15028 0 1 MANKANTSGDFEK LFSSQYGKMANKANTS NTSGDFEKDDDAYKTE K M A E K D 2 0 2 1 0 0 1 1 0 0 0 2 1 1 0 1 1 0 0 0 0 13 1 1411.6402 P49792;E9PGT0;P0DJD0;P0DJD1;F8VYC4;Q99666;O14715;Q7Z3J3;B4DZH4 P49792 1986 1998 RANBP2;RGPD1;RGPD2;RGPD5;RGPD8;RGPD4 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RanBP2-like and GRIP domain-containing protein 4 no no 2;3 1.109E-09 105.95 By matching By MS/MS By MS/MS By MS/MS By matching By matching 2 2 2 2 1 2 14118000 1870200 2113900 6975000 1296200 681990 1180900 5076 945;1251 5133 22675;22676;22677;22678;22679;22680;22681;22682;22683;22684;22685 15029;15030;15031;15032;15033 15033 5 MAPALSGANLTSPRVPLSAYER PASLTSARMAPALSGA VPLSAYERVSGRTSPP R M A E R V 4 2 1 0 0 0 1 1 0 0 3 0 1 0 3 3 1 0 1 1 0 22 1 2300.1947 Q9UQ35;F5GWZ7 Q9UQ35 2371 2392 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.001687 58.712 By matching By MS/MS By matching By matching By matching By matching 1 20909000 0 20909000 0 0 0 0 5077 1623 5134 22686 15034 15034 181 1 MAPTPIPTRSPSDSSTASTPVAEQIER SHLDSHRRMAPTPIPT PVAEQIERALDEVTSS R M A E R A 3 2 0 1 0 1 2 0 0 2 0 0 1 0 5 5 4 0 0 1 0 27 1 2825.3865 Q16643;Q16643-2;A8MV58;F8W9Z3;D6R9Q9 Q16643 328 354 DBN1 Drebrin yes no 3 6.6746E-10 57.238 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 5078 47 5135 22687 15035 15035 1 MAPVPLDDSNRPASLTK HRPEVKLKMAPVPLDD NRPASLTKDRLLASTL K M A T K D 2 1 1 2 0 0 0 0 0 0 2 1 1 0 3 2 1 0 0 1 0 17 1 1810.9247 Q9NYF8-2;Q9NYF8;Q9NYF8-4;E9PK09;E9PQN2;E9PKI6;E9PJA7;Q9NYF8-3;E9PK91 Q9NYF8-2 549 565 BCLAF1 Bcl-2-associated transcription factor 1 no no 3 7.4464E-05 87.824 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 88347000 0 8468500 41353000 18137000 3254200 17135000 5079 1563;452 5136 22688;22689;22690;22691;22692 15036;15037;15038;15039;15040;15041 15038 6 MAPVPLDDSNRPASLTKDR HRPEVKLKMAPVPLDD PASLTKDRLLASTLVH K M A D R L 2 2 1 3 0 0 0 0 0 0 2 1 1 0 3 2 1 0 0 1 0 19 2 2082.0528 Q9NYF8-2;Q9NYF8;Q9NYF8-4;E9PK09;E9PQN2;E9PKI6;E9PJA7;Q9NYF8-3;E9PK91 Q9NYF8-2 549 567 BCLAF1 Bcl-2-associated transcription factor 1 no no 4 0.006745 43.37 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 12244000 3392200 1085000 2188000 873080 427500 4278300 5080 1563;452 5137 22693;22694;22695;22696;22697;22698 15042 15042 1 MAQRQLLNK EVYQKSLKMAQRQLLN AQRQLLNKKGFGEPVL K M A N K K 1 1 1 0 0 2 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 9 1 1100.6124 Q96RL1;F8VQY2;Q96RL1-3;F2Z2T8 Q96RL1 309 317 UIMC1 BRCA1-A complex subunit RAP80 yes no 2 0.030819 82.426 By matching By matching By MS/MS By matching By matching By matching 1 1 1976300 0 1010900 965390 0 0 0 5081 535 5138 22699;22700 15043 15043 1 MASATSSSQRDWGK ________________ SSQRDWGKGMACVGRT - M A G K G 2 1 0 1 0 1 0 1 0 0 0 1 1 0 0 4 1 1 0 0 0 14 1 1510.6834 B5ME40;F5GXG0;Q96T88 B5ME40 1 14 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 2;3 1.3223E-41 119.21 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 36156000 2318800 4508400 6913600 2967400 4181700 15266000 5082 175 5139 22701;22702;22703;22704;22705;22706;22707;22708;22709;22710;22711 15044;15045;15046;15047;15048;15049;15050;15051;15052;15053 15050 9 MATSVVPK TSEVKRSKMATSVVPK MATSVVPKKNEMKKSV K M A P K K 1 0 0 0 0 0 0 0 0 0 0 1 1 0 1 1 1 0 0 2 0 8 0 831.45242 Q5FWF5;Q5FWF5-2 Q5FWF5 251 258 ESCO1 N-acetyltransferase ESCO1 yes no 2 0.027426 73.26 By matching By matching By matching By matching By matching By MS/MS 1 1 1136800 0 0 0 320830 0 815990 5083 1180 5140 22712;22713 15054 15054 1 MCDSHYLESR RCKYNHSKMCDSHYLE DSHYLESRSINEKDYH K M C S R S 0 1 0 1 1 0 1 0 1 0 1 0 1 0 0 2 0 0 1 0 0 10 0 1296.5227 E9PH13;P49759;P49759-3;F8WBF5;P49759-2 E9PH13 51 60 CLK1 Dual specificity protein kinase CLK1 yes no 2;3 0.0031326 91.549 By MS/MS By matching By matching By MS/MS By matching By matching 2 2 1 1 1 18003000 4213800 1439600 2053000 6983900 0 3312900 5084 434 5141 22714;22715;22716;22717;22718;22719;22720 15055;15056 15056 2 MCICHLPCRPVKPNIIGEQITSK SVEFEGYRMCICHLPC IGEQITSKMGAHYHCI R M C S K M 0 1 1 0 3 1 1 1 1 4 1 2 1 0 3 1 1 0 0 1 0 23 2 2750.3852 Q7Z2T5;Q7Z2T5-2 Q7Z2T5 157 179 TRMT1L TRMT1-like protein yes no 4 0.0056251 41.296 By matching By matching By matching By matching By matching By MS/MS 1 12723000 0 0 0 0 0 12723000 5085 1248 5142 22721 15057 15057 1 MCLFAGFQRK SAAAQRRKMCLFAGFQ LFAGFQRKAVVVCPKD K M C R K A 1 1 0 0 1 1 0 1 0 0 1 1 1 2 0 0 0 0 0 0 0 10 1 1256.6158 Q00839;B3KX72;Q00839-2 Q00839 593 602 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 3 0.0014124 98.582 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 11912000 0 6612400 0 5299500 0 0 5086 1022;1023 5143 22722;22723 15058;15059 15058 2 MCSLTFYSK DGKTYRCRMCSLTFYS CSLTFYSKSEMQIHSK R M C S K S 0 0 0 0 1 0 0 0 0 0 1 1 1 1 0 2 1 0 1 0 0 9 0 1135.5042 Q8TF68-3;F8W6Q3;Q8TF68-2;Q8TF68;E9PHB3;F5H8L7 Q8TF68-3 177 185 ZNF384 Zinc finger protein 384 yes no 2 0.014866 77.192 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 31078000 0 3266200 10644000 6561900 4194400 6411600 5087 555 5144 22724;22725;22726;22727;22728 15060;15061;15062 15060 3 MDADDSRAPK ________________ ADDSRAPKGSLRKFLE - M D P K G 2 1 0 3 0 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 0 10 1 1104.487 Q01813 Q01813 1 10 PFKP 6-phosphofructokinase type C yes yes 2 0.013654 72.2 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 4250300 0 400970 575830 410670 1133000 1729800 5088 1031 5145 22729;22730;22731;22732;22733 15063;15064;15065;15066 15065 4 MDAGEVTLVNHNSVFK DDIADRMRMDAGEVTL VNHNSVFKTHLLPQTG R M D F K T 1 0 2 1 0 0 1 1 1 0 1 1 1 1 0 1 1 0 0 3 0 16 0 1759.8563 Q9P0U3;Q9P0U3-2;F8VRZ8;F8W0I8;Q6N001 Q9P0U3 10 25 SENP1;DKFZp686L1432 Sentrin-specific protease 1 yes no 3 0.0056326 47.217 By matching By MS/MS By matching By matching By matching By matching 1 1504200 0 1504200 0 0 0 0 5089 1573 5146 22734 15067 15067 1 MDANSKDKPPETK ________________ KDKPPETKESAMNNAG - M D T K E 1 0 1 2 0 0 1 0 0 0 0 3 1 0 2 1 1 0 0 0 0 13 2 1459.6977 Q69YH5;Q69YH5-2 Q69YH5 1 13 CDCA2 Cell division cycle-associated protein 2 yes no 3 0.019798 49.149 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 10128000 525850 2019000 2561100 672320 915480 3434800 5090 1219 5147 22735;22736;22737;22738;22739;22740 15068 15068 1 MDDKGDPSNEEAPK ________________ PSNEEAPKAIKPTSKE - M D P K A 1 0 1 3 0 0 2 1 0 0 0 2 1 0 2 1 0 0 0 0 0 14 1 1531.6461 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 1 14 DIDO1 Death-inducer obliterator 1 yes no 2 0.0034769 62.287 By MS/MS By matching By matching By MS/MS By matching By MS/MS 2 1 1 1 1 1 11102000 1304900 1457400 2038900 728270 1825400 3747000 5091 1447 5148 22741;22742;22743;22744;22745;22746;22747 15069;15070;15071;15072 15072 4 MDDPTVNWSNER HLIVLINKMDDPTVNW TVNWSNERYEECKEKL K M D E R Y 0 1 2 2 0 0 1 0 0 0 0 0 1 0 1 1 1 1 0 1 0 12 0 1462.6147 H3BR35;P15170;P15170-2 H3BR35 228 239 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes no 2 0.0035965 69.03 By matching By MS/MS By matching By matching By MS/MS By MS/MS 2 1 1 4401900 0 1417400 0 0 922450 2062000 5092 642 5149 22748;22749;22750;22751 15073;15074;15075 15073 3 MDEGVVK ________________ ________________ - M D V K E 0 0 0 1 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 2 0 7 0 776.37384 Q92576-2;Q92576;E9PE34;B3KP41;D6R9X2;D6RBF0 Q92576-2 1 7 PHF3 PHD finger protein 3 yes no 1 0.018533 58.981 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 2437900 0 0 685230 144350 603710 1004600 5093 1353 5150 22752;22753;22754;22755 15076;15077 15077 2 MDENEWGYHGEGNK ________________ GYHGEGNKSLVVAHAQ K M D N K S 0 0 2 1 0 0 3 3 1 0 0 1 1 0 0 0 0 1 1 0 0 14 0 1664.6525 Q9H8X2 Q9H8X2 6 19 IPPK Inositol-pentakisphosphate 2-kinase yes yes 3 0.00092131 76.728 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 3102700 0 518730 1214600 498450 870910 0 5094 1503 5151 22756;22757;22758;22759 15078 15078 1 MDENQFVAVTSTNAAK DKAVVTGKMDENQFVA VTSTNAAKVFNLYPRK K M D A K V 3 0 2 1 0 1 1 0 0 0 0 1 1 1 0 1 2 0 0 2 0 16 0 1724.8039 B4DR31;Q16555;Q8NAN9;F5GWI3;H0YBT4;Q14195;E9PD68;Q14194;Q14195-2;Q14194-2 B4DR31 339 354 DPYSL2;DPYSL3;CRMP1 Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 3;Dihydropyrimidinase-related protein 1 yes no 2 0.0062233 47.64 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 4293900 0 1259200 0 598030 0 2436700 5095 118 5152 22760;22761;22762 15079;15080;15081 15081 3 MDETDASSAVK YPKDNKRKMDETDASS TDASSAVKVKRAVQKT K M D V K V 2 0 0 2 0 0 1 0 0 0 0 1 1 0 0 2 1 0 0 1 0 11 0 1152.4969 Q13148;Q13148-2;B1AKP7;G3V162 Q13148 85 95 TARDBP TAR DNA-binding protein 43 yes no 2 5.8453E-08 110.08 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 13837000 0 1469500 2404400 1206300 3078600 5677900 5096 1073 5153 22763;22764;22765;22766;22767 15082;15083;15084 15083 3 MDETDASSAVKVK YPKDNKRKMDETDASS ASSAVKVKRAVQKTSD K M D V K R 2 0 0 2 0 0 1 0 0 0 0 2 1 0 0 2 1 0 0 2 0 13 1 1379.6602 Q13148;Q13148-2;B1AKP7;G3V162 Q13148 85 97 TARDBP TAR DNA-binding protein 43 yes no 2;3 0 208.51 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 3 3 3 3 3 160810000 20495000 28033000 27590000 14507000 22536000 47653000 5097 1073 5154;5155 22768;22769;22770;22771;22772;22773;22774;22775;22776;22777;22778;22779;22780;22781;22782;22783;22784;22785;22786;22787 15085;15086;15087;15088;15089;15090;15091;15092;15093;15094;15095;15096;15097;15098;15099;15100;15101 15093 130 16 MDETDASSAVKVKR YPKDNKRKMDETDASS SSAVKVKRAVQKTSDL K M D K R A 2 1 0 2 0 0 1 0 0 0 0 2 1 0 0 2 1 0 0 2 0 14 2 1535.7614 Q13148;Q13148-2;B1AKP7;G3V162 Q13148 85 98 TARDBP TAR DNA-binding protein 43 yes no 3 0.032957 61.11 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 2445100 0 0 670630 475660 268000 1030800 5098 1073 5156 22788;22789;22790;22791 15102 15102 0 MDGGDDGNLIIKK ________________ DGNLIIKKRFVSEAEL - M D K K R 0 0 1 3 0 0 0 3 0 2 1 2 1 0 0 0 0 0 0 0 0 13 1 1374.6813 H3BPH9;H3BPF9;H3BN22;Q6P4H7;F5GY57;H3BSF0;H3BQQ6;H3BTI2;H3BTP8;H3BSY6;H3BP64;H3BUL4;H3BMX9;Q9GZU8 H3BPH9 1 13 FAM192A;NIP30 Protein FAM192A yes no 2 0.0045188 66.708 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 5099 493 5157 22792 15103 15103 1 MDGIVPDIAVGTK ________________ PDIAVGTKRGSDELFS - M D T K R 1 0 0 2 0 0 0 2 0 2 0 1 1 0 1 0 1 0 0 2 0 13 0 1314.6853 P26599;P26599-2;P26599-3;A6NLN1 P26599 1 13 PTBP1 Polypyrimidine tract-binding protein 1 yes no 2 0.0042875 57.414 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 36903000 0 0 0 5561100 0 31341000 5100 882 5158 22793;22794 15104;15105 15105 2 MDHTEGSPAEEPPAHAPSPGK ________________ AHAPSPGKFGERPPPK - M D G K F 3 0 0 1 0 0 3 2 2 0 0 1 1 0 5 2 1 0 0 0 0 21 0 2140.9484 Q06330;D6R946 Q06330 1 21 RBPJ Recombining binding protein suppressor of hairless yes no 3 0.002152 40.689 By MS/MS By matching By matching By matching By matching By matching 1 824100 824100 0 0 0 0 0 5101 1042 5159 22795 15106 15106 1 MDIETNDTFSDEAVPESSK VNVRKRPRMDIETNDT EAVPESSKISQENEIG R M D S K I 1 0 1 3 0 0 3 0 0 1 0 1 1 1 1 3 2 0 0 1 0 19 0 2113.8998 O60934 O60934 595 613 NBN Nibrin yes yes 2 0.0079405 49.559 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 18403000 10180000 8223700 0 0 0 0 5102 736 5160 22796;22797;22798 15107;15108;15109 15108 3 MDLAPSKDMGPPKENK TERASPIKMDLAPSKD MGPPKENKKETERASP K M D N K K 1 0 1 2 0 0 1 1 0 0 1 3 2 0 3 1 0 0 0 0 0 16 2 1756.8488 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0 379 394 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3;4 0.0016335 72.428 By matching By matching By matching By MS/MS By MS/MS By matching 1 2 2 2 14437000 1458000 0 917110 3850300 8211700 0 5103 388 5161 22799;22800;22801;22802;22803;22804;22805 15110;15111;15112;15113 15113 4 MDLNSEQAEQLER HVGKPLLKMDLNSEQA EQAEQLERINDALSCE K M D E R I 1 1 1 1 0 2 3 0 0 0 2 0 1 0 0 1 0 0 0 0 0 13 0 1561.7042 Q52LJ0;A8MUW5 Q52LJ0 197 209 FAM98B Protein FAM98B yes no 2 0.0017786 85.837 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 11772000 2403000 1500100 1264400 557790 2800900 3246200 5104 46 5162 22806;22807;22808;22809;22810;22811 15114;15115 15114 2 MDLSGVKK ________________ MDLSGVKKKSLLGVKE - M D K K K 0 0 0 1 0 0 0 1 0 0 1 2 1 0 0 1 0 0 0 1 0 8 1 876.47389 H3BV80;H3BMM9;H3BTC0;Q15287;H3BRK4;H3BTV0;H3BNI3;H3BP82;H3BTR6;H3BUG0;H3BTY0;H3BNU7;H3BUL0 H3BV80 1 8 RNPS1 RNA-binding protein with serine-rich domain 1 yes no 2 0.016864 89.698 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 22214000 5515200 3117100 2404700 2051700 4659700 4465400 5105 631 5163 22812;22813;22814;22815;22816;22817;22818 15116;15117;15118;15119;15120;15121 15121 6 MDPAASSCMR ________________ PAASSCMRSLQPPAPV - M D M R S 2 1 0 1 1 0 0 0 0 0 0 0 2 0 1 2 0 0 0 0 0 10 0 1124.4413 P50221;P50221-2 P50221 1 10 MEOX1 Homeobox protein MOX-1 yes no 2 0.0016367 91.469 By matching By matching By matching By matching By matching By MS/MS 1 1 9418400 0 0 2426000 0 0 6992500 5106 948 5164 22819;22820 15122 15122 1 MDQAIIFCR VRAIKEHKMDQAIIFC DQAIIFCRTKIDCDNL K M D C R T 1 1 0 1 1 1 0 0 0 2 0 0 1 1 0 0 0 0 0 0 0 9 0 1152.542 Q92499;B4DME8;B4DPN6 Q92499 506 514 DDX1 ATP-dependent RNA helicase DDX1 yes no 2 2.5478E-30 136.57 By matching By matching By matching By matching By matching By MS/MS 1 9063800 0 0 0 0 0 9063800 5107 1348 5165 22821 15123 15123 1 MDRSKENCISGPVK ________________ NCISGPVKATAPVGGP - M D V K A 0 1 1 1 1 0 1 1 0 1 0 2 1 0 1 2 0 0 0 1 0 14 2 1619.776 O14965;A3KFJ0;Q5QPD4;A3KFJ1;Q5QPD2;Q5QPD1;A3KFJ2 O14965 1 14 AURKA Aurora kinase A yes no 3 0.0011501 78.985 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 16808000 0 4889300 4924900 1223500 0 5769700 5108 698 5166 22822;22823;22824;22825 15124;15125;15126 15125 3 MDSCIEAFGTTK QTKTYREKMDSCIEAF IEAFGTTKQKRALNTR K M D T K Q 1 0 0 1 1 0 1 1 0 1 0 1 1 1 0 1 2 0 0 0 0 12 0 1358.5846 Q9GZS1-2;Q9GZS1;E7EX70 Q9GZS1-2 135 146 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes no 2 0.0038962 67.118 By matching By matching By matching By matching By matching By MS/MS 1 1 2788100 0 0 0 0 445570 2342600 5109 1475 5167 22826;22827 15127 15127 1 MDSCIEAFGTTKQK QTKTYREKMDSCIEAF AFGTTKQKRALNTRRM K M D Q K R 1 0 0 1 1 1 1 1 0 1 0 2 1 1 0 1 2 0 0 0 0 14 1 1614.7382 Q9GZS1-2;Q9GZS1;E7EX70 Q9GZS1-2 135 148 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes no 2;3 1.9049E-69 131.79 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 2 2 1 30146000 5877900 3258000 3761000 4076000 6670600 6502400 5110 1475 5168 22828;22829;22830;22831;22832;22833;22834;22835;22836 15128;15129;15130;15131;15132;15133;15134 15131 7 MDSFDEDLARPSGLLAQERK REAQVNVRMDSFDEDL GLLAQERKLCRDLVHS R M D R K L 2 2 0 3 0 1 2 1 0 0 3 1 1 1 1 2 0 0 0 0 0 20 2 2277.1059 Q9Y2W1 Q9Y2W1 573 592 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3;4 0.00038337 68.261 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 20029000 0 0 0 16421000 3607500 0 5111 1639 5169 22837;22838 15135;15136 15136 2 MDSTANEVEAVK HENIVIAKMDSTANEV ANEVEAVKVHSFPTLK K M D V K V 2 0 1 1 0 0 2 0 0 0 0 1 1 0 0 1 1 0 0 2 0 12 0 1292.5918 I3L2P8;F5H8J2;H7BZ94;E7EPA8;P07237;H0Y3Z3;B4DUA5;I3L0S0 I3L2P8 367 378 P4HB Protein disulfide-isomerase yes no 2 0.00092463 92.856 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 3090000 0 633760 553440 347010 562110 993720 5112 356 5170 22839;22840;22841;22842;22843 15137;15138;15139 15137 3 MDSTANEVEAVKVHSFPTLK HENIVIAKMDSTANEV VHSFPTLKFFPASADR K M D L K F 2 0 1 1 0 0 2 0 1 0 1 2 1 1 1 2 2 0 0 3 0 20 1 2202.0991 I3L2P8;F5H8J2;H7BZ94;E7EPA8;P07237;H0Y3Z3;B4DUA5;I3L0S0 I3L2P8 367 386 P4HB Protein disulfide-isomerase yes no 3;4 1.0079E-66 124.63 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 24294000 16333000 7960800 0 0 0 0 5113 356 5171;5172 22844;22845 15140;15141;15142 15141 39 3 MDSTEPPYSQK QLIVGVNKMDSTEPPY TEPPYSQKRYEEIVKE K M D Q K R 0 0 0 1 0 1 1 0 0 0 0 1 1 0 2 2 1 0 1 0 0 11 0 1281.5547 Q5VTE0;P68104;F8W6I0 Q5VTE0 155 165 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 2 0.0027179 86.114 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 1 2 2 2 66709000 8580600 3957300 6154300 11149000 25462000 11407000 5114 1006 5173;5174 22846;22847;22848;22849;22850;22851;22852;22853;22854;22855 15143;15144;15145;15146;15147 15145 120 4 MDVANLAK VAQSPHTKMDVANLAK MDVANLAKVFGPTIVA K M D A K V 2 0 1 1 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 1 0 8 0 860.44259 Q9H0H5;H0YIK5;F8VZ41 Q9H0H5 491 498 RACGAP1 Rac GTPase-activating protein 1 yes no 2 0.014947 86.833 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 21064000 2362600 3810200 4362600 2635900 0 7893100 5115 1479 5175 22856;22857;22858;22859;22860 15148;15149;15150;15151 15148 4 MEADPDGQQPEK LEGAEEEKMEADPDGQ PDGQQPEKAENKVENE K M E E K A 1 0 0 2 0 2 2 1 0 0 0 1 1 0 2 0 0 0 0 0 0 12 0 1343.5663 Q92922 Q92922 781 792 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 2 0.0018023 79.744 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 3342200 434730 381150 764790 266740 493720 1001100 5116 1365 5176 22861;22862;22863;22864;22865;22866 15152;15153;15154;15155;15156 15153 5 MEADPDGQQPEKAENK LEGAEEEKMEADPDGQ QPEKAENKVENETDEG K M E N K V 2 0 1 2 0 2 3 1 0 0 0 2 1 0 2 0 0 0 0 0 0 16 1 1785.7839 Q92922 Q92922 781 796 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 3 0.0031603 54.393 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 6635000 0 1493700 1296500 746170 972720 2125800 5117 1365 5177 22867;22868;22869;22870;22871 15157 15157 1 MEAFQELRKPSAR ________________ ELRKPSARLECDHCSF - M E A R L 2 2 0 0 0 1 2 0 0 0 1 1 1 1 1 1 0 0 0 0 0 13 2 1561.8035 Q96JM3 Q96JM3 1 13 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.022782 47.429 By matching By MS/MS By matching By matching By matching By matching 1 14918000 0 14918000 0 0 0 0 5118 1399 5178 22872 15158 15158 1 MEATSREAAPAK ________________ SREAAPAKSSASGPNA - M E A K S 4 1 0 0 0 0 2 0 0 0 0 1 1 0 1 1 1 0 0 0 0 12 1 1260.6132 E9PE58;Q15345-3;Q15345 E9PE58 1 12 LRRC41 Leucine-rich repeat-containing protein 41 yes yes 2 0.0017386 91.307 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 2930100 0 625040 1232600 553920 0 518570 5119 424 5179 22873;22874;22875;22876 15159 15159 1 MEAYVPSEEEK LKLKANLKMEAYVPSE YVPSEEEKNGEILAPP K M E E K N 1 0 0 0 0 0 4 0 0 0 0 1 1 0 1 1 0 0 1 1 0 11 0 1310.57 Q8NFC6 Q8NFC6 2672 2682 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 0.0049151 74.611 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 2 1 1 1 1 1 8633400 161420 1716800 1636500 964620 1355000 2799000 5120 1325 5180 22877;22878;22879;22880;22881;22882;22883 15160;15161;15162;15163 15162 4 MEDCLHTSSENLSK ________________ TSSENLSKLVSWAHSH - M E S K L 0 0 1 1 1 0 2 0 1 0 2 1 1 0 0 3 1 0 0 0 0 14 0 1649.7025 Q8N8K9;Q8N8K9-2;B7ZKW6 Q8N8K9 1 14 KIAA1958 Uncharacterized protein KIAA1958 yes no 2 0.0031886 62.357 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 4323800 0 0 1515700 475900 658330 1673900 5121 209 5181 22884;22885;22886;22887;22888 15164;15165;15166;15167 15164 4 MEDSASASLSSAAATGTSTSTPAAPTARKQLDK ________________ TARKQLDKEQVRKAVD - M E D K E 8 1 0 2 0 1 1 1 0 0 2 2 1 0 2 7 5 0 0 0 0 33 2 3208.5518 O76021;I3L3U9;I3L2F2;I3L4T8;I3L1Y4 O76021 1 33 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 3 1.1845E-40 85.185 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 10346000 6453600 3892100 0 0 0 0 5122 753 5182 22889;22890 15168;15169 15169 2 MEDSQDLNEQSVK ________________ DLNEQSVKKTCTESDV - M E V K K 0 0 1 2 0 2 2 0 0 0 1 1 1 0 0 2 0 0 0 1 0 13 0 1521.6617 O95677-3;E7ESD5;O95677-5;O95677-2;E9PLN6;O95677-4;O95677;F2Z2Y1 O95677-3 1 13 EYA4 Eyes absent homolog 4 yes no 2 0.013167 46.282 By matching By matching By MS/MS By matching By matching By matching 1 909510 0 0 909510 0 0 0 5123 373 5183 22891 15170 15170 1 MEDSQDLNEQSVKK ________________ LNEQSVKKTCTESDVS - M E K K T 0 0 1 2 0 2 2 0 0 0 1 2 1 0 0 2 0 0 0 1 0 14 1 1649.7567 O95677-3;E7ESD5;O95677-5;O95677-2;E9PLN6;O95677-4;O95677;F2Z2Y1 O95677-3 1 14 EYA4 Eyes absent homolog 4 yes no 2 0.0028595 68.168 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 8471300 0 1243100 2856100 896260 813530 2662300 5124 373 5184 22892;22893;22894;22895;22896;22897 15171;15172;15173 15173 3 MEEDPDDVPHGHITSLAVK IVGYVLAKMEEDPDDV HITSLAVKRSHRRLGL K M E V K R 1 0 0 3 0 0 2 1 2 1 1 1 1 0 2 1 1 0 0 2 0 19 0 2088.9786 A6NM98;P41227;F8W808;A8MWP7;Q6P4J0 A6NM98 60 78 NAA10;ARD1A N-alpha-acetyltransferase 10 yes no 4 0.02747 34.262 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 11664000 0 1016400 10648000 0 0 0 5125 29 5185 22898;22899 15174;15175 15175 2 MEEDQELER ________________ EEDQELERKAIEELLK - M E E R K 0 1 0 1 0 1 4 0 0 0 1 0 1 0 0 0 0 0 0 0 0 9 0 1177.4921 Q9Y2S0-2;Q9Y2S0 Q9Y2S0-2 1 9 POLR1D DNA-directed RNA polymerases I and III subunit RPAC2 yes no 2 0.0063956 81.771 By matching By MS/MS By matching By matching By matching By matching 1 1 3787500 1203000 2584500 0 0 0 0 5126 1637 5186 22900;22901 15176 15176 1 MEEDQELERK ________________ EDQELERKAIEELLKE - M E R K A 0 1 0 1 0 1 4 0 0 0 1 1 1 0 0 0 0 0 0 0 0 10 1 1305.5871 Q9Y2S0-2;Q9Y2S0 Q9Y2S0-2 1 10 POLR1D DNA-directed RNA polymerases I and III subunit RPAC2 yes no 2 3.8305E-77 151.79 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 3 2 111300000 5632100 19854000 17042000 4420300 16915000 47439000 5127 1637 5187;5188 22902;22903;22904;22905;22906;22907;22908;22909;22910;22911;22912 15177;15178;15179;15180;15181;15182;15183;15184 15181 183 8 MEEEGTEDNGLEDDSR KRCVKGLKMEEEGTED NGLEDDSRDGQEDMEA K M E S R D 0 1 1 3 0 0 5 2 0 0 1 0 1 0 0 1 1 0 0 0 0 16 0 1824.6956 Q14151;A8MXT5;B4DU53 Q14151 95 110 SAFB2 Scaffold attachment factor B2 yes no 2 0.0036704 65.467 By matching By matching By MS/MS By matching By matching By matching 1 1 1355700 0 0 346780 0 0 1008900 5128 1097 5189 22913;22914 15185 15185 1 MEEEQHHWDDRR EEDMYWRRMEEEQHHW QHHWDDRRRMPDGGYP R M E R R R 0 2 0 2 0 1 3 0 2 0 0 0 1 0 0 0 0 1 0 0 0 12 1 1666.6907 Q96KR1;B5MEH6 Q96KR1 671 682 ZFR Zinc finger RNA-binding protein yes no 3 0.0019946 67.385 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6407200 0 0 812720 612830 1439800 3541800 5129 1403 5190 22915;22916;22917;22918 15186 15186 1 MEEESQSQGRDLTLEENQVK ARQEFEERMEEESQSQ TLEENQVKKYHRLKEE R M E V K K 0 1 1 1 0 3 5 1 0 0 2 1 1 0 0 2 1 0 0 1 0 20 1 2349.0754 Q14683 Q14683 354 373 SMC1A Structural maintenance of chromosomes protein 1A yes yes 3 0.00065355 57.173 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 4156700 0 1042800 1189000 0 0 1924800 5130 1110 5191 22919;22920;22921 15187;15188;15189 15188 3 MEEESQSQGRDLTLEENQVKK ARQEFEERMEEESQSQ LEENQVKKYHRLKEEA R M E K K Y 0 1 1 1 0 3 5 1 0 0 2 2 1 0 0 2 1 0 0 1 0 21 2 2477.1704 Q14683 Q14683 354 374 SMC1A Structural maintenance of chromosomes protein 1A yes yes 4 0.0070908 41.988 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 4790000 1579700 0 893690 0 0 2316600 5131 1110 5192 22922;22923;22924 15190;15191 15190 2 MEELGLASQPPEGRPCQPQTR GGGGKKPKMEELGLAS RPCQPQTRAQKQPGHT K M E T R A 1 2 0 0 1 3 3 2 0 0 2 0 1 0 4 1 1 0 0 0 0 21 1 2380.1264 Q7Z5J4-3;E7EVZ3;Q7Z5J4;A8MTC3;Q7Z5J4-2;C9JWB0 Q7Z5J4-3 1501 1521 RAI1 Retinoic acid-induced protein 1 yes no 3 0.016018 38.057 By matching By matching By matching By matching By MS/MS By matching 1 1 1293000 0 347480 0 0 945500 0 5132 39 5193 22925;22926 15192 15192 1 MEELHNQEMQK RRQEELRRMEELHNQE LHNQEMQKRKEMQLRQ R M E Q K R 0 0 1 0 0 2 3 0 1 0 1 1 2 0 0 0 0 0 0 0 0 11 0 1415.6173 P23246;P23246-2;H0Y9K7 P23246 549 559 SFPQ Splicing factor, proline- and glutamine-rich yes no 3 0.0069681 67.214 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 6649900 0 487160 634800 592840 2049300 2885800 5133 865 5194 22927;22928;22929;22930;22931 15193 15193 1 MEELHNQEVQK RRQEELRRMEELHNQE LHNQEVQKRKQLELRQ R M E Q K R 0 0 1 0 0 2 3 0 1 0 1 1 1 0 0 0 0 0 0 1 0 11 0 1383.6453 Q15233;F5GYZ3;C9JYS8;H7C367 Q15233 326 336 NONO Non-POU domain-containing octamer-binding protein yes no 2;3 1.0934E-08 112.5 By matching By matching By matching By matching By MS/MS By MS/MS 1 2 1 2 2 18205000 1126000 1784900 0 922700 8056500 6315100 5134 1133 5195 22932;22933;22934;22935;22936;22937;22938;22939 15194;15195;15196;15197 15196 4 MEELLRR ________________ ________________ - M E R R E 0 2 0 0 0 0 2 0 0 0 2 0 1 0 0 0 0 0 0 0 0 7 1 945.50659 Q9HA64;I3L1I7;I3L139;I3L407 Q9HA64 1 7 FN3KRP Ketosamine-3-kinase yes no 2 0.010444 100.19 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 5135 1511 5196 22940 15198 15198 1 MEEPQAGDAAR ________________ PQAGDAARFSCPPNFT - M E A R F 3 1 0 1 0 1 2 1 0 0 0 0 1 0 1 0 0 0 0 0 0 11 0 1173.5084 O15446 O15446 1 11 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes yes 2 0.0011226 88.803 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 1 1 1 1 1 16642000 4263500 2021400 1508100 1331700 3860600 3657000 5136 706 5197 22941;22942;22943;22944;22945;22946;22947 15199;15200;15201;15202 15200 4 MEEQGLADASLLKK QNQDLIAKMEEQGLAD ADASLLKKVGFEVEKK K M E K K V 2 0 0 1 0 1 2 1 0 0 3 2 1 0 0 1 0 0 0 0 0 14 1 1531.7916 B1AHE3;Q9UBB4-2;Q9UBB4 B1AHE3 90 103 ATXN10 Ataxin-10 yes no 3 0.0013185 63.29 By matching By matching By matching By matching By matching By MS/MS 1 1 1947400 0 1079200 0 0 0 868190 5137 61 5198 22948;22949 15203 15203 1 MEESAEYEAAR YRRNGITKMEESAEYE SAEYEAARHKREKRKE K M E A R H 3 1 0 0 0 0 4 0 0 0 0 0 1 0 0 1 0 0 1 0 0 11 0 1284.5292 Q86TJ2-3;Q86TJ2-2;Q86TJ2 Q86TJ2-3 210 220 TADA2B Transcriptional adapter 2-beta yes no 2 0.0049151 74.611 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1302500 0 0 0 0 509520 793000 5138 1259 5199 22950;22951 15204;15205 15205 2 MEESEPERK ________________ EESEPERKRARTDEVP - M E R K R 0 1 0 0 0 0 4 0 0 0 0 1 1 0 1 1 0 0 0 0 0 9 1 1133.5023 D6RGI7;Q9UJV9;D6RD33 D6RGI7 1 9 DDX41 Probable ATP-dependent RNA helicase DDX41 yes no 2 0.015922 80.706 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 4632600 0 693560 1064000 389940 741330 1743800 5139 328 5200 22952;22953;22954;22955;22956 15206;15207 15207 2 MEETPTEYLQR QQYAEQLRMEETPTEY TPTEYLQRGFNLPYQD R M E Q R G 0 1 0 0 0 1 3 0 0 0 1 0 1 0 1 0 2 0 1 0 0 11 0 1395.634 Q8NE71;Q8NE71-2;H0YGW7 Q8NE71 703 713 ABCF1 ATP-binding cassette sub-family F member 1 yes no 2 0.0019685 91.313 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 2 11191000 1965200 1827900 0 1404400 661450 5331800 5140 1321 5201 22957;22958;22959;22960;22961;22962 15208;15209;15210;15211 15208 4 MEETQNVQLNK QLTEMVQKMEETQNVQ TQNVQLNKEMTLASNR K M E N K E 0 0 2 0 0 2 2 0 0 0 1 1 1 0 0 0 1 0 0 1 0 11 0 1332.6344 Q9H9H4 Q9H9H4 35 45 VPS37B Vacuolar protein sorting-associated protein 37B yes yes 2 0.03822 73.951 By MS/MS By matching By matching By matching By matching By matching 1 1144800 1144800 0 0 0 0 0 5141 1508 5202 22963 15212 15212 0 MEGHDPKEPEQLRK ________________ KEPEQLRKLFIGGLSF - M E R K L 0 1 0 1 0 1 3 1 1 0 1 2 1 0 2 0 0 0 0 0 0 14 2 1692.8254 E7EWI9;E7ERJ4;P51991-2 E7EWI9 1 14 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 yes no 3;4 5.7527E-42 122.52 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 3 3 2 3 136230000 11854000 1845300 31409000 23556000 19807000 47754000 5142 371 5203;5204 22964;22965;22966;22967;22968;22969;22970;22971;22972;22973;22974;22975;22976;22977;22978 15213;15214;15215;15216;15217;15218;15219;15220;15221;15222;15223;15224 15221 42 12 MEGLLNGSSDPHQSR ESSGDGMKMEGLLNGS SSDPHQSRLASIKAEA K M E S R L 0 1 1 1 0 1 1 2 1 0 2 0 1 0 1 3 0 0 0 0 0 15 0 1626.742 O15014 O15014 770 784 ZNF609 Zinc finger protein 609 yes yes 3 0.0022493 65.511 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 4998900 0 691560 828600 0 1174800 2303900 5143 701 5205 22979;22980;22981;22982 15225;15226;15227;15228;15229 15225 5 MEGPQGACGLK LCSDSTPKMEGPQGAC PQGACGLKLAGDTKPK K M E L K L 1 0 0 0 1 1 1 3 0 0 1 1 1 0 1 0 0 0 0 0 0 11 0 1146.5162 Q5H9F3-3;Q5H9F3-2;Q5H9F3;H7C4B2 Q5H9F3-3 965 975 BCORL1 BCL-6 corepressor-like protein 1 yes no 2 0.029756 55.721 By matching By matching By matching By matching By matching By MS/MS 1 1 2488700 0 0 0 374940 0 2113800 5144 1182 5206 22983;22984 15230 15230 0 MEIDESNAGSSK SKALKEEKMEIDESNA ESNAGSSKEEAGETSP K M E S K E 1 0 1 1 0 0 2 1 0 1 0 1 1 0 0 3 0 0 0 0 0 12 0 1266.5398 Q9UKY1;H0YB50 Q9UKY1 630 641 ZHX1 Zinc fingers and homeoboxes protein 1 yes no 2 0.037346 45.28 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1646800 0 455940 484550 0 0 706360 5145 1604 5207 22985;22986;22987 15231 15231 1 MEIDESNAGSSKEEAGETSPADESGAPK SKALKEEKMEIDESNA ADESGAPKSGSTGKIC K M E P K S 4 0 1 2 0 0 6 3 0 1 0 2 1 0 2 5 1 0 0 0 0 28 1 2822.2036 Q9UKY1;H0YB50 Q9UKY1 630 657 ZHX1 Zinc fingers and homeoboxes protein 1 yes no 3 0.00021136 45.323 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 6606700 2008200 0 1643900 1477600 1477000 0 5146 1604 5208 22988;22989;22990;22991 15232;15233;15234;15235 15233 4 MEIKSTIQK ELEETAARMEIKSTIQ EIKSTIQKTTLVVKDC R M E Q K T 0 0 0 0 0 1 1 0 0 2 0 2 1 0 0 1 1 0 0 0 0 9 1 1076.59 E7ENC6;Q8WZ42-3;Q8WZ42-10;Q8WZ42-9;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42;Q8WZ42-8 E7ENC6 18256 18264 TTN Titin yes no 2 0.026701 77.732 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 5147 349 5209 22992 15236 15236 33 1 MEIYRPHK LNYGLYRKMEIYRPHK MEIYRPHKANAEEMTK K M E H K A 0 1 0 0 0 0 1 0 1 1 0 1 1 0 1 0 0 0 1 0 0 8 1 1072.5488 Q92769;H3BM24;B3KRS5;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;E5RK19;Q13547;Q5TEE2 Q13547 51 58 HDAC2;HDAC1 Histone deacetylase 2;Histone deacetylase;Histone deacetylase 1 no no 2 0.011255 109.01 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 13887000 0 1608700 3793100 0 1075500 7409600 5148 1086;1358 5210 22993;22994;22995;22996 15237;15238 15237 2 MEIYRPHKANAEEMTK LNYGLYRKMEIYRPHK ANAEEMTKYHSDDYIK K M E T K Y 2 1 1 0 0 0 3 0 1 1 0 2 2 0 1 0 1 0 1 0 0 16 2 1946.9343 Q13547;Q5TEE2 Q13547 51 66 HDAC1 Histone deacetylase 1 yes no 3 7.7129E-05 88.768 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 8533300 0 999720 1885100 249080 515190 4884200 5149 1086 5211 22997;22998;22999;23000;23001 15239;15240;15241 15241 3 MEIYRPHKATAEEMTK LNYGLYRKMEIYRPHK ATAEEMTKYHSDEYIK K M E T K Y 2 1 0 0 0 0 3 0 1 1 0 2 2 0 1 0 2 0 1 0 0 16 2 1933.939 Q92769;H3BM24;B3KRS5;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;E5RK19 Q92769 52 67 HDAC2 Histone deacetylase 2;Histone deacetylase yes no 3 0.00011184 88.561 By matching By matching By matching By matching By matching By MS/MS 1 1 3319000 0 0 0 406850 0 2912100 5150 1358 5212 23002;23003 15242 15242 1 MEKAPIDTSDVEEK NQRITAFKMEKAPIDT DTSDVEEKAEEIIAEA K M E E K A 1 0 0 2 0 0 3 0 0 1 0 2 1 0 1 1 1 0 0 1 0 14 1 1590.7447 Q06265-3;Q06265-4;D6RIY6;Q06265;Q06265-2 Q06265-3 214 227 EXOSC9 Exosome complex component RRP45 yes no 2;3 9.4787E-104 144.18 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 2 26241000 1991100 5811300 4078500 1896700 2970200 9493400 5151 330 5213 23004;23005;23006;23007;23008;23009;23010;23011;23012 15243;15244;15245;15246;15247;15248;15249 15248 7 MELEQANER ALVRCNMKMELEQANE ELEQANERECEVLKKI K M E E R E 1 1 1 0 0 1 3 0 0 0 1 0 1 0 0 0 0 0 0 0 0 9 0 1118.5026 Q9Y232-2;Q9Y232;Q9Y232-3;Q9Y232-4 Q9Y232-2 507 515 CDYL Chromodomain Y-like protein yes no 2 0.014686 77.533 By matching By matching By matching By matching By matching By MS/MS 1 654680 0 0 0 0 0 654680 5152 1628 5214 23013 15250 15250 1 MELITILEK ________________ ELITILEKTVSPDRLE - M E E K T 0 0 0 0 0 0 2 0 0 2 2 1 1 0 0 0 1 0 0 0 0 9 0 1088.6151 Q14974 Q14974 1 9 KPNB1 Importin subunit beta-1 yes yes 2 0.025563 57.347 By matching By matching By matching By matching By matching By MS/MS 1 27885000 0 0 0 0 0 27885000 5153 1119 5215 23014 15251 15251 1 MENFQKVEK ________________ ENFQKVEKIGEGTYGV - M E E K I 0 0 1 0 0 1 2 0 0 0 0 2 1 1 0 0 0 0 0 1 0 9 1 1151.5645 P24941-2;P24941;G3V5T9;E7ESI2;G3V317 P24941-2 1 9 CDK2 Cyclin-dependent kinase 2 yes no 2 0.038082 64.374 By matching By matching By MS/MS By matching By matching By matching 1 1 1 2576700 817930 0 828280 930520 0 0 5154 589 5216 23015;23016;23017 15252 15252 1 MENLPEINTAK NPDGVLSKMENLPEIN LPEINTAKIKGKNSFA K M E A K I 1 0 2 0 0 0 2 0 0 1 1 1 1 0 1 0 1 0 0 0 0 11 0 1258.6227 A8MTM6;Q15398;Q15398-1 A8MTM6 290 300 DLGAP5 Disks large-associated protein 5 yes no 2 0.010566 64.224 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 9465200 0 2665200 0 0 2418000 4382000 5155 42 5217 23018;23019;23020 15253;15254 15254 2 MENSQLCK ________________ MENSQLCKLFIGGLNV - M E C K L 0 0 1 0 1 1 1 0 0 0 1 1 1 0 0 1 0 0 0 0 0 8 0 1008.4369 Q13151 Q13151 1 8 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 2 0.013728 74.301 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 11120000 2363100 0 622230 2376800 4243400 1514000 5156 1074 5218 23021;23022;23023;23024;23025 15255;15256 15255 2 MEPENKYLPELMAEK PSATASVKMEPENKYL LPELMAEKDSLDPSFT K M E E K D 1 0 1 0 0 0 4 0 0 0 2 2 2 0 2 0 0 0 1 0 0 15 1 1820.8689 Q07666;Q07666-3;Q07666-2;E7ET98 Q07666 97 111 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 2;3 4.165E-30 116.87 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 3 4 2 4 3 527850000 138610000 147580000 85805000 133640000 22223000 0 5157 1045 5219;5220;5221 23026;23027;23028;23029;23030;23031;23032;23033;23034;23035;23036;23037;23038;23039;23040;23041 15257;15258;15259;15260;15261;15262;15263;15264;15265;15266;15267;15268;15269;15270;15271 15265 125;126 14 MEQQEMAQQER KLQQLLQRMEQQEMAQ QEMAQQERKQQQELHL R M E E R K 1 1 0 0 0 4 3 0 0 0 0 0 2 0 0 0 0 0 0 0 0 11 0 1406.5918 Q96EU6-2;Q96EU6 Q96EU6-2 169 179 RRP36 Ribosomal RNA processing protein 36 homolog yes no 2 0.024861 53.034 By matching By matching By matching By matching By matching By MS/MS 1 419630 0 0 0 0 0 419630 5158 1384 5222 23042 15272 15272 1 MEQQQLEEQK YSKFLLTKMEQQQLEE QQQLEEQKKKEKLERK K M E Q K K 0 0 0 0 0 4 3 0 0 0 1 1 1 0 0 0 0 0 0 0 0 10 0 1289.5922 Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-4;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9;Q9NRZ9-8;Q9NRZ9-7;B1ALG6;Q9NRZ9-9 Q9NRZ9-6 86 95 HELLS Lymphoid-specific helicase yes no 2 0.0076039 84.198 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1380300 147660 270310 474020 0 0 488280 5159 1540 5223 23043;23044;23045;23046 15273;15274 15274 2 MEQQQLEEQKK YSKFLLTKMEQQQLEE QQLEEQKKKEKLERKK K M E K K K 0 0 0 0 0 4 3 0 0 0 1 2 1 0 0 0 0 0 0 0 0 11 1 1417.6871 Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-4;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9;Q9NRZ9-8;Q9NRZ9-7;B1ALG6;Q9NRZ9-9 Q9NRZ9-6 86 96 HELLS Lymphoid-specific helicase yes no 3 0.010738 55.314 By matching By MS/MS By matching By matching By matching By matching 1 535670 0 535670 0 0 0 0 5160 1540 5224 23047 15275 15275 1 MERAESSSTEPAK ________________ SSSTEPAKAIKPIDRK - M E A K A 2 1 0 0 0 0 3 0 0 0 0 1 1 0 1 3 1 0 0 0 0 13 1 1421.6457 P54278;P54278-3;P54278-4;P54278-2 P54278 1 13 PMS2 Mismatch repair endonuclease PMS2 yes no 2 0.019839 51.135 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1046800 0 171610 0 271040 0 604180 5161 966 5225 23048;23049;23050 15276 15276 1 MERFVVTAPPARNR ________________ TAPPARNRSKTALYVT - M E N R S 2 3 1 0 0 0 1 0 0 0 0 0 1 1 2 0 1 0 0 2 0 14 2 1642.8726 Q9UFW8;C9JUJ0 Q9UFW8 1 14 CGGBP1 CGG triplet repeat-binding protein 1 yes no 3 1.0238E-41 120.6 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 14501000 0 7938700 0 6562500 0 0 5162 1588 5226 23051;23052 15277;15278 15277 2 MESPASSQPASMPQSKGK ________________ SMPQSKGKSKRKKDLR - M E G K S 2 0 0 0 0 2 1 1 0 0 0 2 2 0 3 5 0 0 0 0 0 18 1 1846.8553 P46734 P46734 1 18 MAP2K3 Dual specificity mitogen-activated protein kinase kinase 3 yes yes 2 0.011645 42.58 By matching By matching By matching By MS/MS By matching By matching 1 1 1 3795100 0 0 1581300 1258900 0 954930 5163 925 5227 23053;23054;23055 15279 15279 1 METEADAPSPAPSLGER KNSRIGEKMETEADAP PAPSLGERLEPRKIPL K M E E R L 3 1 0 1 0 0 3 1 0 0 1 0 1 0 3 2 1 0 0 0 0 17 0 1756.7938 Q12873;E9PG89;Q12873-2 Q12873 1593 1609 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 2 0.0017505 75.143 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 17528000 0 4668100 4067900 0 0 8792300 5164 430 5228 23056;23057;23058 15280;15281 15280 2 METEQPEETFPNTETNGEFGKRPAEDMEEEQAFK ________________ MEEEQAFKRSRNTDEM - M E F K R 2 1 2 1 0 2 10 2 0 0 0 2 2 3 3 0 4 0 0 0 0 34 2 3974.7099 P61978-3;P61978-2;B4DFF1;P61978;Q5T6W5;Q5T6W2 P61978-3 1 34 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 3 6.5994E-37 73.212 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 2 2 2 756840000 79244000 86789000 232780000 91495000 0 266530000 5165 984 5229;5230 23059;23060;23061;23062;23063;23064;23065;23066;23067 15282;15283;15284;15285;15286;15287;15288;15289;15290;15291 15288 115 10 METSALKQQEQPAATKIR ________________ QPAATKIRNLPWVEKY - M E I R N 3 1 0 0 0 3 2 0 0 1 1 2 1 0 1 1 2 0 0 0 0 18 2 2029.0626 P40937 P40937 1 18 RFC5 Replication factor C subunit 5 yes yes 3 0.0015934 59.252 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 2 1 15506000 2270600 0 2440300 0 0 10795000 5166 909 5231 23068;23069;23070;23071 15292;15293;15294 15294 3 MEVDQPEPADTQPEDISESKVEDCK QEVKMEAKMEVDQPEP ESKVEDCKMESTETEE K M E C K M 1 0 0 4 1 2 5 0 0 1 0 2 1 0 3 2 1 0 0 2 0 25 1 2875.2375 Q09472 Q09472 982 1006 EP300 Histone acetyltransferase p300 yes yes 3 0.0042864 40.086 By MS/MS By matching By matching By matching By matching By matching 1 1931100 1931100 0 0 0 0 0 5167 1053 5232 23072 15295 15295 1 MEVEAAEAR ________________ EVEAAEARSPAPGYKR - M E A R S 3 1 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 0 1 0 9 0 1004.4597 Q96K58;C9JHH8;C9JG35;C9JCJ0;C9J092 Q96K58 1 9 ZNF668 Zinc finger protein 668 yes no 2 0.0078059 76.943 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4457000 861200 730610 0 1332900 0 1532300 5168 1401 5233 23073;23074;23075;23076 15296;15297 15297 2 MEVISLQNEK NSNVETLKMEVISLQN VISLQNEKADLDRTLR K M E E K A 0 0 1 0 0 1 2 0 0 1 1 1 1 0 0 1 0 0 0 1 0 10 0 1189.6013 Q92878-2;Q92878;Q92878-3;E7ESD9 Q92878-2 508 517 RAD50 DNA repair protein RAD50 yes no 2 0.0087186 79.659 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 25682000 2304900 3975600 2558700 2697000 4346100 9799600 5169 1362 5234 23077;23078;23079;23080;23081;23082 15298;15299;15300;15301 15301 4 MFQVPDSEGGRAGSR ________________ EGGRAGSRAMKPPGGE - M F S R A 1 2 0 1 0 1 1 3 0 0 0 0 1 1 1 2 0 0 0 1 0 15 1 1592.7365 Q9H910;B4DLH4;H3BMV3;B4DL85;H3BMM8;H3BS08;B4E1P3 Q9H910 1 15 HN1L Hematological and neurological expressed 1-like protein yes no 2 0.010946 53.946 By matching By MS/MS By matching By matching By matching By matching 1 1 15179000 0 9889400 0 5289700 0 0 5170 98 5235 23083;23084 15302 15302 0 MFRAVEEGLTYK GPAQSVAKMFRAVEEG VEEGLTYKFHAAWSSV K M F Y K F 1 1 0 0 0 0 2 1 0 0 1 1 1 1 0 0 1 0 1 1 0 12 1 1442.7228 Q5JTH9-2;E9PCK7;Q5JTH9;F5H456 Q5JTH9-2 371 382 RRP12 RRP12-like protein yes no 3 0.00047541 94.402 By matching By matching By matching By matching By matching By MS/MS 1 1 5204400 0 0 0 295180 0 4909200 5171 414 5236 23085;23086 15303 15303 1 MGAHYHCIICSATITR IGEQITSKMGAHYHCI ICSATITRRTDMLGHV K M G T R R 2 1 0 0 2 0 0 1 2 3 0 0 1 0 0 1 2 0 1 0 0 16 0 1889.8699 Q7Z2T5;Q7Z2T5-2 Q7Z2T5 180 195 TRMT1L TRMT1-like protein yes no 3 0.0016831 68.283 By matching By matching By matching By matching By matching By MS/MS 1 1 3384900 0 0 0 0 466100 2918900 5172 1248 5237 23087;23088 15304 15304 1 MGAHYHCIICSATITRR IGEQITSKMGAHYHCI CSATITRRTDMLGHVR K M G R R T 2 2 0 0 2 0 0 1 2 3 0 0 1 0 0 1 2 0 1 0 0 17 1 2045.971 Q7Z2T5;Q7Z2T5-2 Q7Z2T5 180 196 TRMT1L TRMT1-like protein yes no 4 0.00084625 74.649 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5737400 0 0 715790 229150 1317500 3474900 5173 1248 5238 23089;23090;23091;23092 15305 15305 1 MGAYHTIELEPNRQFTLAK IQENEYVKMGAYHTIE NRQFTLAKKQWDSVVL K M G A K K 2 1 1 0 0 1 2 1 1 1 2 1 1 1 1 0 2 0 1 0 0 19 1 2218.1205 Q9BRX2 Q9BRX2 96 114 PELO Protein pelota homolog yes yes 4 0.00026504 81.01 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 2 1 2 248330000 26413000 11631000 59045000 32368000 13922000 104950000 5174 1443 5239;5240 23093;23094;23095;23096;23097;23098;23099;23100 15306;15307;15308;15309;15310;15311;15312 15312 169 7 MGDAQPEMFDK VSELDGRKMGDAQPEM AQPEMFDKVLVDAPCS K M G D K V 1 0 0 2 0 1 1 1 0 0 0 1 2 1 1 0 0 0 0 0 0 11 0 1267.5213 Q9H649 Q9H649 197 207 NSUN3 Putative methyltransferase NSUN3 yes yes 2 6.1909E-05 100.93 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 3773400 0 818480 914360 333140 0 1707400 5175 1495 5241 23101;23102;23103;23104 15313;15314 15314 2 MGEASDLPRTDGLQEK SCMGSGFKMGEASDLP RTDGLQEKEEGREAYA K M G E K E 1 1 0 2 0 1 2 2 0 0 2 1 1 0 1 1 1 0 0 0 0 16 1 1745.8254 Q6UB99 Q6UB99 1137 1152 ANKRD11 Ankyrin repeat domain-containing protein 11 yes yes 3 0.026453 39.629 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4339500 0 1018100 1183300 0 583550 1554500 5176 1236 5242 23105;23106;23107;23108 15315 15315 1 MGFTEVTPVTGASLRR GENEKAERMGFTEVTP VTGASLRRTMLLLSRS R M G R R T 1 2 0 0 0 0 1 2 0 0 1 0 1 1 1 1 3 0 0 2 0 16 1 1720.893 P55265;P55265-4;E7ENU4;P55265-5 P55265 802 817 ADAR Double-stranded RNA-specific adenosine deaminase yes no 2;3 1.3429E-50 119.39 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 1 3 2 670640000 122920000 91576000 88374000 40815000 50636000 276310000 5177 352 5243;5244 23109;23110;23111;23112;23113;23114;23115;23116;23117;23118;23119;23120;23121 15316;15317;15318;15319;15320;15321;15322;15323;15324;15325;15326;15327 15322 34 11 MGGGSIEVSVPR VRGDFNSRMGGGSIEV SIEVSVPRFAVGIVIG R M G P R F 0 1 0 0 0 0 1 3 0 1 0 0 1 0 1 2 0 0 0 2 0 12 0 1187.5969 Q96I24;A6NJ37;Q96I24-2 Q96I24 251 262 FUBP3 Far upstream element-binding protein 3 yes no 2 0.0031193 71.806 By matching By matching By matching By matching By matching By MS/MS 1 1 1 9745400 2969200 1588800 0 0 0 5187500 5178 1394 5245 23122;23123;23124 15328 15328 1 MGHTVTVWNR GIVSNLLKMGHTVTVW HTVTVWNRTAEKCDLF K M G N R T 0 1 1 0 0 0 0 1 1 0 0 0 1 0 0 0 2 1 0 2 0 10 0 1199.587 Q49A26-2;Q49A26;Q49A26-3;Q49A26-4;Q49A26-5 Q49A26-2 272 281 GLYR1 Putative oxidoreductase GLYR1 no no 3 0.0080367 75.387 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 3653700 0 427060 0 0 1112600 2114100 5179 1168;1169 5246 23125;23126;23127 15329;15330 15330 2 MGHTVTVWNRTAEK GIVSNLLKMGHTVTVW VWNRTAEKCDLFIQEG K M G E K C 1 1 1 0 0 0 1 1 1 0 0 1 1 0 0 0 3 1 0 2 0 14 1 1628.8093 Q49A26-2;Q49A26;Q49A26-3;Q49A26-4;Q49A26-5 Q49A26-2 272 285 GLYR1 Putative oxidoreductase GLYR1 no no 3;4 8.3529E-08 97.957 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 2 40478000 0 4542500 2611100 2124900 14799000 16401000 5180 1168;1169 5247 23128;23129;23130;23131;23132;23133;23134;23135 15331;15332;15333;15334;15335;15336 15336 6 MGPAMGPALGAGIER MGANSLERMGPAMGPA ALGAGIERMGLAMGGG R M G E R M 3 1 0 0 0 0 1 4 0 1 1 0 2 0 2 0 0 0 0 0 0 15 0 1426.7061 P52272-2;P52272;Q59ES8;F5H7Z1 P52272-2 553 567 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.002424 59.709 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 14669000 0 8541700 0 6127100 0 0 5181 956 5248 23136;23137 15337;15338 15337 1 MGQEFVESKEK KEEWEKMKMGQEFVES EFVESKEKLGTSGYPP K M G E K L 0 0 0 0 0 1 3 1 0 0 0 2 1 1 0 1 0 0 0 1 0 11 1 1310.6177 Q9Y6W5;Q9Y6W5-2 Q9Y6W5 208 218 WASF2 Wiskott-Aldrich syndrome protein family member 2 yes no 3 0.02964 51.727 By MS/MS By matching By matching By matching By matching By matching 2 1 1 1 7229200 1873000 0 2758200 1234600 0 1363400 5182 1663 5249 23138;23139;23140;23141;23142 15339;15340 15340 2 MGVLEEGGKGK RWHHEEEKMGVLEEGG LEEGGKGKEAAGSVRT K M G G K E 0 0 0 0 0 0 2 4 0 0 1 2 1 0 0 0 0 0 0 1 0 11 1 1103.5645 Q5T3I0;Q5T3I0-3;E9PAV9 Q5T3I0 303 313 GPATCH4 G patch domain-containing protein 4 yes no 2 0.012578 75.416 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 5183 1191 5250 23143 15341 15341 1 MGWSGSGGLGAK KGHQMLVKMGWSGSGG GSGGLGAKEQGIQDPI K M G A K E 1 0 0 0 0 0 0 5 0 0 1 1 1 0 0 2 0 1 0 0 0 12 0 1106.5179 Q8IWX8 Q8IWX8 852 863 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 2 0.0018235 82.505 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 2 1 1 1 1 23802000 2091100 4892300 2811200 2009300 4114200 7883900 5184 1281 5251 23144;23145;23146;23147;23148;23149;23150 15342;15343;15344 15342 3 MGWTGGGLGK IGNQLLRKMGWTGGGL WTGGGLGKSGEGIREP K M G G K S 0 0 0 0 0 0 0 5 0 0 1 1 1 0 0 0 1 1 0 0 0 10 0 962.46439 O15226;G3V1N1 O15226 562 571 NKRF NF-kappa-B-repressing factor yes no 2 0.039111 53.597 By MS/MS By matching By matching By matching By matching By matching 1 1 1 4555000 2291200 213010 0 0 2050700 0 5185 578 5252 23151;23152;23153 15345 15345 1 MHAADLEKPMVEK DVEGNLIKMHAADLEK LEKPMVEKQDQSPSLR K M H E K Q 2 0 0 1 0 0 2 0 1 0 1 2 2 0 1 0 0 0 0 1 0 13 1 1497.732 P54278;P54278-3;C9J167;I3L0B5;Q68D20 P54278 387 399 PMS2;PMS2CL Mismatch repair endonuclease PMS2;Protein PMS2CL yes no 3 0.0016171 80.318 By matching By matching By matching By matching By matching By MS/MS 1 1 2497900 0 0 0 0 193740 2304100 5186 966 5253 23154;23155 15346 15346 1 MHETNQGEFITSDSQEALFSK LLDFPNSKMHETNQGE SQEALFSKSSRGCLQN K M H S K S 1 0 1 1 0 2 3 1 1 1 1 1 1 2 0 3 2 0 0 0 0 21 0 2398.0747 Q5VVJ2;Q5VVJ2-2 Q5VVJ2 254 274 MYSM1 Histone H2A deubiquitinase MYSM1 yes no 3 3.0752E-32 102.43 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 15514000 0 4636900 10877000 0 0 0 5187 1207 5254;5255 23156;23157 15347;15348 15347 147 1 MHHGTGPQNVQHQLQR ________________ NVQHQLQRSRACPGSE - M H Q R S 0 1 1 0 0 4 0 2 3 0 1 0 1 0 1 0 1 0 0 1 0 16 0 1866.902 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A7E2D7;F8WCN8 Q96L91-4 1 16 EP400 E1A-binding protein p400 yes no 4 0.00046917 57.267 By MS/MS By matching By matching By matching By matching By matching 1 1059300 1059300 0 0 0 0 0 5188 1405 5256 23158 15349 15349 1 MHQFLYEEEAAQQQLVAK SPTNYRQRMHQFLYEE AQQQLVAKLTLRGQVF R M H A K L 3 0 0 0 0 4 3 0 1 0 2 1 1 1 0 0 0 0 1 1 0 18 0 2162.0466 Q9BYK8 Q9BYK8 346 363 HELZ2 Helicase with zinc finger domain 2 yes yes 3 0.019655 46.873 By matching By matching By matching By matching By matching By MS/MS 1 43838000 0 0 0 0 0 43838000 5189 1469 5257 23159 15350 15350 170 1 MHRDSCPLDCK ________________ DSCPLDCKVYVGNLGN - M H C K V 0 1 0 2 2 0 0 0 1 0 1 1 1 0 1 1 0 0 0 0 0 11 1 1417.5901 B4E241;P84103 B4E241 1 11 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 yes no 2 0.0089722 69.03 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2553600 0 552920 0 0 0 2000700 5190 160 5258 23160;23161;23162;23163 15351;15352;15353 15352 3 MIASDSHRPEVK EESPLRIKMIASDSHR DSHRPEVKLKMAPVPL K M I V K L 1 1 0 1 0 0 1 0 1 1 0 1 1 0 1 2 0 0 0 1 0 12 1 1368.682 Q9NYF8-2;Q9NYF8;Q9NYF8-4;E9PK09;E9PQN2;E9PKI6;E9PJA7;Q9NYF8-3;E9PK91 Q9NYF8-2 535 546 BCLAF1 Bcl-2-associated transcription factor 1 no no 3 0.0018546 87.184 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 31034000 4122900 3166000 4803600 4688100 6973900 7279800 5191 1563;452 5259 23164;23165;23166;23167;23168;23169 15354;15355;15356;15357;15358;15359;15360 15354 7 MIASDSHRPEVKLK EESPLRIKMIASDSHR HRPEVKLKMAPVPLDD K M I L K M 1 1 0 1 0 0 1 0 1 1 1 2 1 0 1 2 0 0 0 1 0 14 2 1609.861 Q9NYF8-2;Q9NYF8;Q9NYF8-4;E9PK09;E9PQN2;E9PKI6;E9PJA7;Q9NYF8-3;E9PK91 Q9NYF8-2 535 548 BCLAF1 Bcl-2-associated transcription factor 1 no no 4 0.016493 45.891 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 22859000 5082700 9863400 312590 0 783270 6816900 5192 1563;452 5260 23170;23171;23172;23173;23174 15361;15362 15361 2 MICQQVEAIK EDQNSLLKMICQQVEA CQQVEAIKKEMQELKL K M I I K K 1 0 0 0 1 2 1 0 0 2 0 1 1 0 0 0 0 0 0 1 0 10 0 1218.6101 P49792;E9PGT0;Q99666;O14715;Q99666-2;F8W705 P49792 813 822 RANBP2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 yes no 2 2.6584E-24 129.88 By matching By matching By matching By matching By MS/MS By MS/MS 2 1 2 1 2 2 35422000 7201500 3713900 2237200 2626900 8503800 11139000 5193 945 5261;5262 23175;23176;23177;23178;23179;23180;23181;23182;23183;23184 15363;15364;15365 15364 111 3 MICQQVEAIKK EDQNSLLKMICQQVEA QQVEAIKKEMQELKLN K M I K K E 1 0 0 0 1 2 1 0 0 2 0 2 1 0 0 0 0 0 0 1 0 11 1 1346.705 P49792;E9PGT0;Q99666;O14715;Q99666-2;F8W705 P49792 813 823 RANBP2;RGPD5;RGPD8 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 yes no 3 1.7653E-05 102.53 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 56586000 5158800 11044000 8979500 7523000 11254000 12626000 5194 945 5263 23185;23186;23187;23188;23189;23190 15366;15367;15368 15366 3 MIDSARKQNNFSLAMK CKFSMKMKMIDSARKQ NNFSLAMKLLKELHKE K M I M K L 2 1 2 1 0 1 0 0 0 1 1 2 2 1 0 2 0 0 0 0 0 16 2 1852.9288 P78527;E7EUY0;P78527-2 P78527 3242 3257 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3;4 0.010039 44.691 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 21005000 1463500 1820000 3337300 2248200 4246500 7889500 5195 1012 5264 23191;23192;23193;23194;23195;23196 15369;15370 15369 2 MIFDVESMKK KPVQDLIKMIFDVESM FDVESMKKAMVEYEID K M I K K A 0 0 0 1 0 0 1 0 0 1 0 2 2 1 0 1 0 0 0 1 0 10 1 1226.6039 P09874 P09874 675 684 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 3.1938E-09 114.97 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 9810100 0 1789100 0 2986900 0 5034100 5196 815 5265 23197;23198;23199 15371;15372 15371 2 MIGFPSSAGSVSPR LLEGQDAKMIGFPSSA SAGSVSPRSTSVTTTS K M I P R S 1 1 0 0 0 0 0 2 0 1 0 0 1 1 2 4 0 0 0 1 0 14 0 1391.6867 P13646;CON__P13646-1 P13646 416 429 KRT13 Keratin, type I cytoskeletal 13 yes no 2 0.026845 57.106 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 + 5197 834 5266 23200 15373 15373 83 1 MIINDPRYSALAK ASWEQAMKMIINDPRY PRYSALAKLSEKKQAF K M I A K L 2 1 1 1 0 0 0 0 0 2 1 1 1 0 1 1 0 0 1 0 0 13 1 1490.7915 E9PHJ7;O75400-2;O75400-3;F8W9L2;O75400;F5H578 E9PHJ7 290 302 PRPF40A Pre-mRNA-processing factor 40 homolog A yes no 3 2.2883E-34 119.74 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 50392000 8203200 2911600 9442500 5732300 2101200 22001000 5198 438 5267 23201;23202;23203;23204;23205;23206 15374;15375;15376;15377;15378;15379 15376 5 MILIQDGSQNTNVDKPLR LQERAGVKMILIQDGS TNVDKPLRIIGDPYKV K M I L R I 0 1 2 2 0 2 0 1 0 2 2 1 1 0 1 1 1 0 0 1 0 18 1 2041.0626 Q92945-2;Q92945;E7EP96 Q92945-2 267 284 KHSRP Far upstream element-binding protein 2 yes no 2;3 4.0681E-272 177.58 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 2 243760000 40300000 30526000 22530000 15770000 6643600 127990000 5199 1366 5268 23207;23208;23209;23210;23211;23212;23213;23214 15380;15381;15382;15383;15384;15385;15386;15387;15388;15389 15383 10 MILIQDGSQNTNVDKPLRIIGDPYK LQERAGVKMILIQDGS RIIGDPYKVQQACEMV K M I Y K V 0 1 2 3 0 2 0 2 0 4 2 2 1 0 2 1 1 0 1 1 0 25 2 2827.4902 Q92945-2;Q92945;E7EP96 Q92945-2 267 291 KHSRP Far upstream element-binding protein 2 yes no 3;4 1.4145E-12 75.224 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 2 1 80395000 0 38460000 0 20330000 21604000 0 5200 1366 5269 23215;23216;23217;23218 15390;15391;15392 15392 158 3 MINTDLSR NYNLPMHKMINTDLSR MINTDLSRILKSPEIQ K M I S R I 0 1 1 1 0 0 0 0 0 1 1 0 1 0 0 1 1 0 0 0 0 8 0 948.46987 E7EWF1;P36578;H3BM89;B4DMJ2 E7EWF1 284 291 RPL4 60S ribosomal protein L4 yes no 2 0.021668 78.516 By matching By MS/MS By matching By matching By matching By matching 1 1 1 3542900 560330 1155100 0 0 1827500 0 5201 392 5270 23219;23220;23221 15393 15393 1 MIQPSASGSLVGRENELSAGLSK SVPRRTLKMIQPSASG ELSAGLSKRKHRNDHL K M I S K R 2 1 1 0 0 1 2 3 0 1 3 1 1 0 1 5 0 0 0 1 0 23 1 2330.19 C9K0U5;H7C608;E2QRF9;O75496 C9K0U5 28 50 GMNN Geminin yes no 3 3.1522E-21 93.776 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 106570000 0 42942000 33201000 0 0 30431000 5202 279 5271 23222;23223;23224 15394;15395;15396;15397 15395 4 MIRAESGPDLRYEVTSGGGGTSR PRINTLGRMIRAESGP SGGGGTSRMYYSRRGV R M I S R M 1 3 0 1 0 0 2 5 0 1 1 0 1 0 1 3 2 0 1 1 0 23 2 2395.155 P15924;P15924-2 P15924 17 39 DSP Desmoplakin yes no 4 0.034564 30.869 By matching By MS/MS By matching By matching By matching By matching 1 1 1 4732900 0 1174200 0 0 973290 2585400 5203 840 5272 23225;23226;23227 15398 15398 1 MISEELVAASR EFTQWRVRMISEELVA EELVAASRTQVQKANS R M I S R T 2 1 0 0 0 0 2 0 0 1 1 0 1 0 0 2 0 0 0 1 0 11 0 1204.6122 Q9UFC0 Q9UFC0 194 204 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes yes 2 0.0050676 73.881 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 4258800 0 1073600 0 524930 0 2660300 5204 1587 5273 23228;23229;23230 15399;15400 15399 2 MISFCPDCGK ________________ SFCPDCGKSIQAAFKF - M I G K S 0 0 0 1 2 0 0 1 0 1 0 1 1 1 1 1 0 0 0 0 0 10 0 1213.493 E7EMG6;Q8IV63-2;Q8IV63-3;Q8IV63 E7EMG6 1 10 VRK3 Inactive serine/threonine-protein kinase VRK3 yes no 2 0.0031326 91.549 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 15339000 1063800 1472200 4747600 0 236160 7818900 5205 346 5274 23231;23232;23233;23234;23235 15401;15402 15401 2 MISKPADSQDVHELVLSK FFVGQSARMISKPADS VHELVLSKEDFEKKEK R M I S K E 1 0 0 2 0 1 1 0 1 1 2 2 1 0 1 3 0 0 0 2 0 18 1 1996.0299 A6NHR9;A6NHR9-2 A6NHR9 252 269 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes no 3;4 2.9876E-32 108.97 By matching By matching By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 2 44768000 0 2685600 13654000 6635900 901050 20891000 5206 23 5275 23236;23237;23238;23239;23240;23241;23242;23243;23244;23245 15403;15404;15405;15406;15407;15408 15406 6 MIYASSKDAIKK ESAPLKSKMIYASSKD SSKDAIKKKLTGIKHE K M I K K K 2 0 0 1 0 0 0 0 0 2 0 3 1 0 0 2 0 0 1 0 0 12 2 1353.7326 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;G3V5P4;Q9Y281;P60981;P60981-2;F6RFD5 E9PP50 115 126 CFL1;CFL2;DSTN Cofilin-1;Cofilin-2;Destrin no no 3 0.016185 64.224 By matching By matching By matching By MS/MS By matching By matching 1 1 2136500 0 439940 0 1696600 0 0 5207 461;980 5276 23246;23247 15409 15409 1 MIYKCPMCR ________________ IYKCPMCREFFSERAD - M I C R E 0 1 0 0 2 0 0 0 0 1 0 1 2 0 1 0 0 0 1 0 0 9 1 1257.5491 Q8N3J9 Q8N3J9 1 9 ZNF664 Zinc finger protein 664 yes yes 3 0.017458 71.692 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 3978900 0 0 1222300 684470 1925600 146590 5208 1296 5277 23248;23249;23250;23251 15410 15410 1 MKEELAALFSELK ________________ AALFSELKQEQKKVDE - M K L K Q 2 0 0 0 0 0 3 0 0 0 3 2 1 1 0 1 0 0 0 0 0 13 1 1507.7956 C9JQH3;Q86UV6-2;I3L0H3;Q86UV7;Q86UV6 C9JQH3 1 13 TRIM73;TRIM74 Tripartite motif-containing protein 74;Tripartite motif-containing protein 73 yes no 2 0.0032375 64.224 By matching By matching By matching By matching By MS/MS By matching 1 931050 0 0 0 0 931050 0 5209 265 5278 23252 15411 15411 22 0 MKEEVPTALVEAHVRK SALEEFSKMKEEVPTA LVEAHVRKVEEAAKVT K M K R K V 2 1 0 0 0 0 3 0 1 0 1 2 1 0 1 0 1 0 0 3 0 16 2 1835.9928 Q8TAQ2-2;F8VTJ5;Q8TAQ2;F8VXC8 Q8TAQ2-2 734 749 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 4 5.8531E-18 101.2 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 19779000 0 3589900 5159000 521240 0 10508000 5210 539 5279 23253;23254;23255;23256 15412;15413;15414;15415 15413 4 MKEIAEAYLGK VSSMVLTKMKEIAEAY IAEAYLGKTVTNAVVT K M K G K T 2 0 0 0 0 0 2 1 0 1 1 2 1 0 0 0 0 0 1 0 0 11 1 1251.6533 P11142;E9PKE3;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PI65 P11142 127 137 HSPA8 Heat shock cognate 71 kDa protein yes no 2;3 0.0039054 80.312 By matching By MS/MS By matching By MS/MS By matching By matching 2 2 2 1 1 11780000 1542800 3437400 0 1698200 2109600 2991800 5211 824 5280 23257;23258;23259;23260;23261;23262;23263;23264 15416;15417;15418;15419 15418 4 MKGCPVNTEPSGPTCEK GCPMHEGKMKGCPVNT PSGPTCEKKTYSVPAH K M K E K K 0 0 1 0 2 0 2 2 0 0 0 2 1 0 3 1 2 0 0 1 0 17 1 1890.8274 P53701 P53701 32 48 HCCS Cytochrome c-type heme lyase yes yes 3 0.0029306 62.469 By MS/MS By matching By matching By matching By matching By MS/MS 2 1 1 1 1 1 10840000 2264600 1092400 1526300 1866300 1885500 2204500 5212 963 5281 23265;23266;23267;23268;23269;23270;23271 15420;15421 15420 2 MKGCPVNTEPSGPTCEKK GCPMHEGKMKGCPVNT SGPTCEKKTYSVPAHQ K M K K K T 0 0 1 0 2 0 2 2 0 0 0 3 1 0 3 1 2 0 0 1 0 18 2 2018.9224 P53701 P53701 32 49 HCCS Cytochrome c-type heme lyase yes yes 3 0.01244 48.423 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1327100 296660 0 0 0 1030500 0 5213 963 5282 23272;23273 15422;15423 15423 2 MKGTLIDNQFK ELEAKKAKMKGTLIDN TLIDNQFK________ K M K F K - 0 0 1 1 0 1 0 1 0 1 1 2 1 1 0 0 1 0 0 0 0 11 1 1293.6751 A8MPX7;F5GWL7;Q9H5V9 A8MPX7 163 173 CXorf56 UPF0428 protein CXorf56 yes no 3 0.027932 52.247 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 4180100 529350 0 1079000 959400 0 1612400 5214 37 5283 23274;23275;23276;23277 15424 15424 1 MKKMGEMQLSSVTDSK QKIDMDEKMKKMGEMQ LSSVTDSKKKKTILDQ K M K S K K 0 0 0 1 0 1 1 1 0 0 1 3 3 0 0 3 1 0 0 1 0 16 2 1798.8627 E9PD83;F5GZ53;Q13009 E9PD83 421 436 TIAM1 T-lymphoma invasion and metastasis-inducing protein 1 yes no 3 0.02881 40.278 By matching By matching By matching By matching By matching By MS/MS 1 2798300 0 0 0 0 0 2798300 5215 420 5284 23278 15425 15425 45;46 1 MKLNISFPATGCQK ________________ FPATGCQKLIEVDDER - M K Q K L 1 0 1 0 1 1 0 1 0 1 1 2 1 1 1 1 1 0 0 0 0 14 1 1593.8007 A2A3R7;P62753 A2A3R7 1 14 RPS6 40S ribosomal protein S6 yes no 3 5.8543E-13 104.9 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 19067000 10465000 0 0 8601700 0 0 5216 5 5285 23279;23280 15426;15427 15426 2 MKLTWGSS SSKAHNQKMKLTWGSS MKLTWGSS________ K M K S S - 0 0 0 0 0 0 0 1 0 0 1 1 1 0 0 2 1 1 0 0 0 8 1 908.44259 Q96GM8;B4DEM6 Q96GM8 503 510 TOE1 Target of EGR1 protein 1 yes no 2 1.042E-31 146.58 By matching By matching By MS/MS By matching By matching By matching 1 3038400 0 0 3038400 0 0 0 5217 1389 5286 23281 15428 15428 0 MKTPVQYSQQQNSPQK FPLYEPAKMKTPVQYS QQQNSPQKHKNKDLYT K M K Q K H 0 0 1 0 0 5 0 0 0 0 0 2 1 0 2 2 1 0 1 1 0 16 1 1890.9258 P46013;F5H4V4 P46013 345 360 MKI67 Antigen KI-67 yes no 3 0.011431 44.691 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 7014600 0 1224800 1551100 0 1385700 2852900 5218 919 5287 23282;23283;23284;23285 15429;15430 15429 2 MKVQDQDLPNTPHSK RIDVEILRMKVQDQDL LPNTPHSKAVYKILQG R M K S K A 0 0 1 2 0 2 0 0 1 0 1 2 1 0 2 1 1 0 0 1 0 15 1 1736.8516 Q08554-2;Q08554 Q08554-2 375 389 DSC1 Desmocollin-1 yes no 4 0.0056451 52.527 By matching By matching By matching By MS/MS By matching By matching 1 1 1 2854800 0 556880 1440800 857100 0 0 5219 1047 5288 23286;23287;23288 15431 15431 1 MLADDAEAGAEDEK ETRELLDKMLADDAEA EAGAEDEKEVEELKKQ K M L E K E 4 0 0 3 0 0 3 1 0 0 1 1 1 0 0 0 0 0 0 0 0 14 0 1463.6086 Q9UPT8 Q9UPT8 481 494 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 2 0.0011064 74.649 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 4031000 0 798410 1103800 537670 699790 891330 5220 1620 5289 23289;23290;23291;23292;23293 15432;15433;15434;15435;15436 15432 4 MLATDGAAQQAHTTR HRQLKERRMLATDGAA AQQAHTTRSSQRCLAF R M L T R S 4 1 0 1 0 2 0 1 1 0 1 0 1 0 0 0 3 0 0 0 0 15 0 1570.7522 F8VXI8;Q9H9L4;F8VX10;H0YHR2;H0YIQ8 F8VXI8 283 297 KANSL2 KAT8 regulatory NSL complex subunit 2 yes no 3 0.036112 37.177 By matching By matching By matching By matching By MS/MS By matching 1 1 1017400 342110 0 0 0 675260 0 5221 546 5290 23294;23295 15437 15437 1 MLDMGFEPQIRK LVLDEADRMLDMGFEP GFEPQIRKIVDQIRPD R M L R K I 0 1 0 1 0 1 1 1 0 1 1 1 2 1 1 0 0 0 0 0 0 12 1 1463.7265 P17844;E7ETL9;Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 251 262 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 3 7.8858E-08 105.03 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 2 70668000 0 3330500 0 0 5151000 62186000 5222 1361;629;853 5291;5292 23296;23297;23298;23299 15438;15439;15440;15441;15442 15439 65 4 MLDTDGNEMIEK SGFHVAFKMLDTDGNE DGNEMIEKREFFKD__ K M L E K R 0 0 1 2 0 0 2 1 0 1 1 1 2 0 0 0 1 0 0 0 0 12 0 1394.6058 F2Z348;Q8IYU8 F2Z348 183 194 MICU2 Calcium uptake protein 2, mitochondrial yes no 2 0.0014474 91.093 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6651700 0 822070 708410 0 1457300 3663900 5223 480 5293 23300;23301;23302;23303 15443 15443 1 MLEELNK PSLVEQQKMLEELNKQ KMLEELNKQIEEQKRQ K M L N K Q 0 0 1 0 0 0 2 0 0 0 2 1 1 0 0 0 0 0 0 0 0 7 0 875.44225 Q9BTC0 Q9BTC0 1478 1484 DIDO1 Death-inducer obliterator 1 yes yes 2 0.036755 79.469 By matching By matching By matching By matching By MS/MS By matching 1 1 1147100 0 546810 0 0 600280 0 5224 1447 5294 23304;23305 15444 15444 0 MLEELNKQIEEQK PSLVEQQKMLEELNKQ NKQIEEQKRQLEEQEE K M L Q K R 0 0 1 0 0 2 4 0 0 1 2 2 1 0 0 0 0 0 0 0 0 13 1 1630.8236 Q9BTC0 Q9BTC0 1478 1490 DIDO1 Death-inducer obliterator 1 yes yes 2;3 1.4472E-73 138.02 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 1 1 2 16197000 0 3489300 4010500 155330 3345100 5196600 5225 1447 5295 23306;23307;23308;23309;23310;23311;23312;23313 15445;15446 15445 2 MLENTDNSSPSTEHSQGLEK YKHMKLHKMLENTDNS EHSQGLEKQGVHAAGA K M L E K Q 0 0 2 1 0 1 3 1 1 0 2 1 1 0 1 4 2 0 0 0 0 20 0 2202.9699 Q96H79 Q96H79 249 268 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 3 4.7659E-39 112.01 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 2 2 153410000 16915000 1609600 44781000 22929000 33735000 33444000 5226 1390 5296;5297 23314;23315;23316;23317;23318;23319;23320;23321;23322;23323;23324 15447;15448;15449;15450;15451;15452;15453;15454 15448 161 7 MLEYDPAK RLFDLIQKMLEYDPAK MLEYDPAKRITLREAL K M L A K R 1 0 0 1 0 0 1 0 0 0 1 1 1 0 1 0 0 0 1 0 0 8 0 965.45282 E9PH13;P49759;P49759-3;B8ZZR0 E9PH13 427 434 CLK1 Dual specificity protein kinase CLK1 yes no 2 0.017081 82.279 By MS/MS By matching By matching By MS/MS By MS/MS By matching 2 1 1 1 7317200 1523200 0 0 1589800 2870800 1333400 5227 434 5298 23325;23326;23327;23328;23329 15455;15456;15457 15456 3 MLGTEGGEGFVVKVR ________________ EGFVVKVRGLPWSCSA M M L V R G 0 1 0 0 0 0 2 4 0 0 1 1 1 1 0 0 1 0 0 3 0 15 1 1577.8236 D6RBM0;E9PCY7;P31943;G8JLB6;D6RIU0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E7EQJ0;E5RGV0;E7EN40;D6RDL0;D6RF17;D6R9D3;E5RJ94 D6RBM0 2 16 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 2 4.1641E-43 119.96 By matching By matching By matching By MS/MS By matching By matching 1 1 15514000 0 0 0 15020000 0 494210 5228 322 5299 23330;23331 15458 15458 29 1 MLIEKDPSLEK ETFGMVVKMLIEKDPS EKDPSLEKSIQFALRQ K M L E K S 0 0 0 1 0 0 2 0 0 1 2 2 1 0 1 1 0 0 0 0 0 11 1 1301.6901 F8WF16;Q8NEY8-6;E9PAX8;F8W6A0;Q8NEY8-8;Q8NEY8-2;F8W0Q9;Q8NEY8-3;Q8NEY8 F8WF16 251 261 PPHLN1 Periphilin-1 yes no 3 0.012541 62.166 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 6946000 697870 1912000 1360200 636630 0 2339300 5229 401 5300 23332;23333;23334;23335;23336 15459;15460;15461 15460 3 MLIFSVRDMFAK ________________ SVRDMFAKMSILGVRS - M L A K M 1 1 0 1 0 0 0 0 0 1 1 1 2 2 0 1 0 0 0 1 0 12 1 1456.7571 Q92878-2 Q92878-2 1 12 RAD50 DNA repair protein RAD50 yes yes 3 0.007946 70.942 By matching By MS/MS By matching By matching By matching By matching 1 4765800 0 4765800 0 0 0 0 5230 1362 5301 23337 15462 15462 154;155 0 MLIYDPAK NGLDLLSKMLIYDPAK MLIYDPAKRISGKMAL K M L A K R 1 0 0 1 0 0 0 0 0 1 1 1 1 0 1 0 0 0 1 0 0 8 0 949.49429 P06493;P06493-2 P06493 267 274 CDK1 Cyclin-dependent kinase 1 yes no 2 0.0074874 94.114 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 14873000 0 0 4090500 2696800 8086100 0 5231 799 5302 23338;23339;23340 15463;15464;15465 15463 3 MLLSQNESQKIPK KKHFSQLKMLLSQNES NESQKIPKVDFRNFLS K M L P K V 0 0 1 0 0 2 1 0 0 1 2 2 1 0 1 2 0 0 0 0 0 13 1 1514.8127 A6NFX5;Q32NC0 A6NFX5 104 116 C18orf21 UPF0711 protein C18orf21 yes no 2;3 0.00047368 94.547 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 2 15749000 683480 1420900 2074700 0 5151600 6418900 5232 20 5303 23341;23342;23343;23344;23345;23346 15466;15467;15468;15469 15467 4 MLNLTDRQVK EKRLQLSRMLNLTDRQ NLTDRQVKIWFQNRRM R M L V K I 0 1 1 1 0 1 0 0 0 0 2 1 1 0 0 0 1 0 0 1 0 10 1 1216.6598 E7EQ07;P31277;H0YIA6;O43248;P31270 E7EQ07 123 132 HOXD11;HOXA11;HOXC11 Homeobox protein Hox-D11;Homeobox protein Hox-C11;Homeobox protein Hox-A11 yes no 3 0.008731 81.525 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 13288000 1783800 1063700 1879000 2316400 2158900 4086200 5233 360 5304 23347;23348;23349;23350;23351;23352 15470 15470 1 MLPDKDCRYALYDATYETK DPYATFVKMLPDKDCR YDATYETKESKKEDLV K M L T K E 2 1 0 3 1 0 1 0 0 0 2 2 1 0 1 0 2 0 3 0 0 19 2 2352.0766 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3 E9PP50 74 92 CFL1 Cofilin-1 yes no 3;4 0.00053649 64.298 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 1 1 31826000 0 1658100 22533000 0 1030200 6605100 5234 461 5305 23353;23354;23355;23356;23357 15471;15472;15473;15474 15472 4 MLPTLGGEEGVSR GVVRDVAKMLPTLGGE GGEEGVSRIYADPTKR K M L S R I 0 1 0 0 0 0 2 3 0 0 2 0 1 0 1 1 1 0 0 1 0 13 0 1344.6708 Q5T7U1;Q9Y5Q8-2;H7BY84;Q9Y5Q8;Q9Y5Q8-3 Q5T7U1 39 51 GTF3C5 General transcription factor 3C polypeptide 5 yes no 2 0.029078 44.968 By matching By MS/MS By matching By matching By matching By matching 1 1 1 7312100 0 2117500 0 1117800 0 4076800 5235 657 5306 23358;23359;23360 15475 15475 1 MLQHEPDRAFYGLKQVEK KALDDFYKMLQHEPDR YGLKQVEKANEAMAID K M L E K A 1 1 0 1 0 2 2 1 1 0 2 2 1 1 1 0 0 0 1 1 0 18 2 2188.1099 Q9BRX2 Q9BRX2 284 301 PELO Protein pelota homolog yes yes 4 0.026369 35.872 By matching By matching By matching By matching By matching By MS/MS 1 1 3080600 0 0 701930 0 0 2378600 5236 1443 5307 23361;23362 15476 15476 1 MLQPCGPPADKPEEN VRFNLMEKMLQPCGPP PADKPEEN________ K M L E N - 1 0 1 1 1 1 2 1 0 0 1 1 1 0 4 0 0 0 0 0 0 15 1 1681.744 Q9BWJ5 Q9BWJ5 72 86 SF3B5 Splicing factor 3B subunit 5 yes yes 2 0.014251 52.42 By MS/MS By matching By matching By matching By matching By matching 1 4582200 4582200 0 0 0 0 0 5237 1459 5308 23363 15477 15477 1 MLRESLKEYQK QNKTEKERMLRESLKE ESLKEYQKISNQVDLS R M L Q K I 0 1 0 0 0 1 2 0 0 0 2 2 1 0 0 1 0 0 1 0 0 11 2 1423.7493 E9PF10;O75694-2;B4DLT2;O75694 E9PF10 832 842 NUP155 Nuclear pore complex protein Nup155 yes no 3 0.0074667 87.667 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 58620000 0 10056000 13838000 11771000 0 22955000 5238 100 5309 23364;23365;23366;23367 15478;15479 15479 2 MLSQDAPTVK SKMEQKFRMLSQDAPT SQDAPTVKESCKTSSN R M L V K E 1 0 0 1 0 1 0 0 0 0 1 1 1 0 1 1 1 0 0 1 0 10 0 1088.5536 O60934;F5H3R2 O60934 395 404 NBN Nibrin yes no 2 0.0075071 84.31 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2799400 0 0 0 0 1468300 1331000 5239 736 5310 23368;23369 15480;15481 15480 2 MLSQDAPTVKESCK SKMEQKFRMLSQDAPT PTVKESCKTSSNNNSM R M L C K T 1 0 0 1 1 1 1 0 0 0 1 2 1 0 1 2 1 0 0 1 0 14 1 1592.7538 O60934;F5H3R2 O60934 395 408 NBN Nibrin yes no 3 3.8502E-08 99.669 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 6978500 1115000 1227500 1509600 1152900 1025900 947650 5240 736 5311 23370;23371;23372;23373;23374;23375 15482;15483;15484;15485;15486;15487 15485 6 MLSSAYISDHMK VPCHVCGKMLSSAYIS AYISDHMKVHSQGPHH K M L M K V 1 0 0 1 0 0 0 0 1 1 1 1 2 0 0 3 0 0 1 0 0 12 0 1381.637 C6G496;P56270;G5E927;I3L2Z5;F5H7A6;H3BQI4;H3BQS2;H3BQD6;I3L411;H3BPU3;I3L4Y2;I3L0M3 C6G496 377 388 MAZ Myc-associated zinc finger protein yes no 2;3 2.2944E-37 127.52 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 222880000 38770000 11135000 46011000 21831000 69915000 35223000 5241 219 5312;5313 23376;23377;23378;23379;23380;23381;23382;23383;23384;23385;23386;23387;23388 15488;15489;15490;15491;15492;15493;15494;15495;15496;15497;15498;15499 15491 18 12 MLVEYTQNQK EDRRQLARMLVEYTQN VEYTQNQKDVLSEKEK R M L Q K D 0 0 1 0 0 2 1 0 0 0 1 1 1 0 0 0 1 0 1 1 0 10 0 1252.6122 Q9NQG5;A2A2M0 Q9NQG5 257 266 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes no 2 0.0070719 84.817 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 6932900 752030 810380 761010 604820 1738400 2266300 5242 1530 5314 23389;23390;23391;23392;23393;23394 15500;15501;15502 15500 3 MMGGAGPGSSLEAR PSPKALAKMMGGAGPG PGSSLEARSPSDLHIS K M M A R S 2 1 0 0 0 0 1 4 0 0 1 0 2 0 1 2 0 0 0 0 0 14 0 1319.5962 B7ZM82;B3KVH1;O95785;O95785-2 B7ZM82 427 440 WIZ Protein Wiz yes no 2 0.0011071 72.681 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 16830000 3037500 2471400 2560300 2577600 0 6183500 5243 212 5315 23395;23396;23397;23398;23399 15503;15504;15505 15503 3 MMGGAGPGSSLEARSPSDLHISPLAK PSPKALAKMMGGAGPG LHISPLAKKLPPPPGS K M M A K K 3 1 0 1 0 0 1 4 1 1 3 1 2 0 3 5 0 0 0 0 0 26 1 2565.2679 B7ZM82;B3KVH1;O95785;O95785-2 B7ZM82 427 452 WIZ Protein Wiz yes no 4 2.9717E-16 81.696 By matching By matching By matching By MS/MS By matching By matching 1 21879000 0 0 0 21879000 0 0 5244 212 5316 23400 15506 15506 1 MMLDDIVSR PESVQKAKMMLDDIVS MLDDIVSRGRGGPPGQ K M M S R G 0 1 0 2 0 0 0 0 0 1 1 0 2 0 0 1 0 0 0 1 0 9 0 1078.5151 Q92945-2;Q92945;E7EP96 Q92945-2 206 214 KHSRP Far upstream element-binding protein 2 yes no 2 0 217.64 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 269830000 29906000 132320000 0 85972000 0 21634000 5245 1366 5317;5318 23401;23402;23403;23404;23405 15507;15508;15509;15510;15511 15507 159;160 5 MMLDDIVSRGR PESVQKAKMMLDDIVS DDIVSRGRGGPPGQFH K M M G R G 0 2 0 2 0 0 0 1 0 1 1 0 2 0 0 1 0 0 0 1 0 11 1 1291.6377 Q92945-2;Q92945;E7EP96 Q92945-2 206 216 KHSRP Far upstream element-binding protein 2 yes no 2;3 4.4193E-20 121.5 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 2 1 1 108910000 0 9237400 18132000 37745000 4683300 39115000 5246 1366 5319 23406;23407;23408;23409;23410;23411 15512;15513;15514;15515;15516 15515 5 MMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGK PESVQKAKMMLDDIVS EIMIPAGKAGLVIGKG K M M G K A 2 2 3 3 0 3 1 8 1 3 1 1 3 1 3 1 1 0 0 2 0 39 2 4063.9415 Q92945-2;Q92945;E7EP96 Q92945-2 206 244 KHSRP Far upstream element-binding protein 2 yes no 5 4.6613E-20 52.872 By matching By matching By MS/MS By matching By matching By matching 1 1 114060000 0 0 99756000 0 14307000 0 5247 1366 5320 23412;23413 15517 15517 156;159;160 1 MMLEEQVR LDKERSVRMMLEEQVR MMLEEQVRSLEAHMYP R M M V R S 0 1 0 0 0 1 2 0 0 0 1 0 2 0 0 0 0 0 0 1 0 8 0 1034.4889 Q01664 Q01664 170 177 TFAP4 Transcription factor AP-4 yes yes 2 0.014717 87.696 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 12570000 0 1898900 1915600 652730 1274800 6827700 5248 1029 5321 23414;23415;23416;23417;23418 15518 15518 1 MMLTHLVVRPGLGSK ITQVAKKKMMLTHLVV VRPGLGSKTGSMSKQE K M M S K T 0 1 0 0 0 0 0 2 1 0 3 1 2 0 1 1 1 0 0 2 0 15 1 1637.9109 F5H2G1;F5GWX5;Q14839;Q14839-2;Q12873;E9PG89;Q12873-2 F5H2G1 1166 1180 CHD4;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 no no 3;4 0.00024128 86.738 By matching By matching By MS/MS By matching By matching By MS/MS 1 3 130190000 0 0 20593000 0 0 109600000 5249 486;430 5322;5323 23419;23420;23421;23422 15519;15520;15521;15522 15521 48;49 4 MMNGGHYTYSENRVEK THPLAKDKMMNGGHYT YSENRVEKDGLILTSR K M M E K D 0 1 2 0 0 0 2 2 1 0 0 1 2 0 0 1 1 0 2 1 0 16 1 1914.8353 Q99497 Q99497 133 148 PARK7 Protein DJ-1 yes yes 3;4 0.0058311 48.899 By MS/MS By MS/MS By matching By matching By matching By matching 2 1 1 1 1 1 9409800 1521000 1683800 1260600 1113900 1441400 2389300 5250 1425 5324 23423;23424;23425;23426;23427;23428;23429 15523;15524 15524 2 MMREQQQIEK EKKKELGKMMREQQQI REQQQIEKEIKEKDSE K M M E K E 0 1 0 0 0 3 2 0 0 1 0 1 2 0 0 0 0 0 0 0 0 10 1 1319.6326 Q14683;H0Y7K8 Q14683 273 282 SMC1A Structural maintenance of chromosomes protein 1A yes no 3 0.018364 65.278 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 3496200 452520 754920 1236900 582920 468990 0 5251 1110 5325 23430;23431;23432;23433;23434 15525;15526 15526 2 MNAQETATGMAFEEPIDEK SEHPSTSKMNAQETAT FEEPIDEKKFEKTEDG K M N E K K 3 0 1 1 0 1 4 1 0 1 0 1 2 1 1 0 2 0 0 0 0 19 0 2110.9187 O43719;E9PFP2 O43719 411 429 HTATSF1 HIV Tat-specific factor 1 yes no 2 2.0863E-121 138.75 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 18497000 0 9253500 0 9243900 0 0 5252 720 5326 23435;23436 15527;15528 15527 2 MNAQETATGMAFEEPIDEKK SEHPSTSKMNAQETAT EEPIDEKKFEKTEDGG K M N K K F 3 0 1 1 0 1 4 1 0 1 0 2 2 1 1 0 2 0 0 0 0 20 1 2239.0137 O43719;E9PFP2 O43719 411 430 HTATSF1 HIV Tat-specific factor 1 yes no 3 5.971E-05 76.176 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 23737000 0 0 9928200 11333000 2476300 0 5253 720 5327 23437;23438;23439;23440 15529;15530;15531 15529 3 MNCDRVFNVFCLYGNVEKVK VYGLDQSKMNCDRVFN YGNVEKVKFMKSKPGA K M N V K F 0 1 3 1 2 0 1 1 0 0 1 2 1 2 0 0 0 0 1 4 0 20 2 2491.181 P14866;A6NIT8 P14866 394 413 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 3 8.8942E-23 94.188 By matching By matching By matching By MS/MS By matching By matching 1 37065000 0 0 0 37065000 0 0 5254 838 5328 23441 15532 15532 0 MNECTHLIVQEPK GQYMGQLKMNECTHLI HLIVQEPKGQKYECAK K M N P K G 0 0 1 0 1 1 2 0 1 1 1 1 1 0 1 0 1 0 0 1 0 13 0 1597.7592 Q92547;H0Y8I7 Q92547 235 247 TOPBP1 DNA topoisomerase 2-binding protein 1 yes no 3 0.0048322 60.157 By matching By matching By matching By matching By matching By MS/MS 1 1 2668900 0 924110 0 0 0 1744800 5255 1351 5329 23442;23443 15533 15533 1 MNECTHLIVQEPKGQK GQYMGQLKMNECTHLI VQEPKGQKYECAKRWN K M N Q K Y 0 0 1 0 1 2 2 1 1 1 1 2 1 0 1 0 1 0 0 1 0 16 1 1910.9343 Q92547;H0Y8I7 Q92547 235 250 TOPBP1 DNA topoisomerase 2-binding protein 1 yes no 3 8.3904E-27 109.99 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 12691000 1110800 0 2215100 1939700 2906900 4518900 5256 1351 5330 23444;23445;23446;23447;23448 15534;15535;15536 15536 2 MNGLSRPLIKPQK NACGLYSKMNGLSRPL RPLIKPQKRVPSSRRL K M N Q K R 0 1 1 0 0 1 0 1 0 1 2 2 1 0 2 1 0 0 0 0 0 13 2 1480.8548 Q92908-2;Q92908 Q92908-2 274 286 GATA6 Transcription factor GATA-6 yes no 3 0.0069682 69.815 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 12952000 0 2338900 3301400 1384900 0 5927100 5257 1363 5331 23449;23450;23451;23452 15537;15538 15537 2 MNGPADGEVDYKK ________________ DGEVDYKKKYRNLKRK - M N K K K 1 0 1 2 0 0 1 2 0 0 0 2 1 0 1 0 0 0 1 1 0 13 1 1422.6449 Q6Y2K3;I3NI13;I3L270;H3BNM4;Q8NBZ0 Q6Y2K3 1 13 INO80E INO80 complex subunit E yes no 2 0.0063652 61.11 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 6941600 1401500 810220 845810 838260 1571900 1474000 5258 633 5332 23453;23454;23455;23456;23457;23458 15539;15540;15541;15542;15543 15541 5 MNINGQWEGEVNGRK GDIVKVTRMNINGQWE EGEVNGRKGLFPFTHV R M N R K G 0 1 3 0 0 1 2 3 0 1 0 1 1 0 0 0 0 1 0 1 0 15 1 1730.8159 P46109 P46109 269 283 CRKL Crk-like protein yes yes 3 0.0072384 67.019 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 5259 924 5333 23459 15544 15544 1 MNLQAQPK ________________ MNLQAQPKAQNKRKRC - M N P K A 1 0 1 0 0 2 0 0 0 0 1 1 1 0 1 0 0 0 0 0 0 8 0 928.48004 Q6PJG2;F6RU81;C9JYU7 Q6PJG2 1 8 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 2 0.0095995 81.191 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 5883200 0 0 0 0 2317300 3565900 5260 1231 5334 23460;23461;23462 15545;15546;15547 15546 3 MNLQAQPKAQNK ________________ AQPKAQNKRKRCLFGG - M N N K R 2 0 2 0 0 3 0 0 0 0 1 2 1 0 1 0 0 0 0 0 0 12 1 1369.7136 Q6PJG2;F6RU81;C9JYU7 Q6PJG2 1 12 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 2 2.6613E-18 116.84 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 17456000 3570400 2361800 2053100 2210600 3516000 3744600 5261 1231 5335 23463;23464;23465;23466;23467;23468;23469 15548;15549;15550;15551;15552;15553 15550 5 MNPQIRNPMER ________________ QIRNPMERMYRDTFYD - M N E R M 0 2 2 0 0 1 1 0 0 1 0 0 2 0 2 0 0 0 0 0 0 11 1 1384.6704 B0QYD2;Q9UH17;Q9UH17-2;B0QYD3 B0QYD2 1 11 APOBEC3B DNA dC->dU-editing enzyme APOBEC-3B no no 2 0.0043356 82.494 By matching By matching By matching By matching By matching By MS/MS 1 52211000 0 0 0 0 0 52211000 5262 56 5336 23470 15554 15554 1 MNPQIRNPMK ________________ PQIRNPMKAMYPGTFY - M N M K A 0 1 2 0 0 1 0 0 0 1 0 1 2 0 2 0 0 0 0 0 0 10 1 1227.6216 Q9NRW3 Q9NRW3 1 10 APOBEC3C DNA dC->dU-editing enzyme APOBEC-3C yes yes 2 1.2018E-62 148.69 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 5 4 4 6 9 730140000 25304000 113580000 99290000 29170000 14639000 448160000 5263 1537 5337;5338;5339 23471;23472;23473;23474;23475;23476;23477;23478;23479;23480;23481;23482;23483;23484;23485;23486;23487;23488;23489;23490;23491;23492;23493;23494;23495;23496;23497;23498;23499;23500 15555;15556;15557;15558;15559;15560;15561;15562;15563;15564;15565;15566;15567;15568;15569;15570;15571 15557 175;176 17 MNRVGNESLNRAVAK KRALNTRRMNRVGNES SLNRAVAKAAETIIDT R M N A K A 2 2 3 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 0 2 0 15 2 1657.8682 Q9GZS1-2;Q9GZS1;E7EX70 Q9GZS1-2 156 170 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes no 4 0.019788 41.621 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4820300 874660 847600 0 0 790740 2307300 5264 1475 5340 23501;23502;23503;23504 15572 15572 1 MNVEEDVQEEQSK LLSYKDGKMNVEEDVQ DVQEEQSKEASDPESN K M N S K E 0 0 1 1 0 2 4 0 0 0 0 1 1 0 0 1 0 0 0 2 0 13 0 1563.6723 E9PFK5;P78316-2;P78316;F5H653 E9PFK5 338 350 NOP14 Nucleolar protein 14 yes no 2 0.0010767 90.707 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 2215000 0 1080900 0 0 0 1134100 5265 428 5341 23505;23506;23507 15573;15574;15575;15576 15573 4 MNVTPEVK ________________ MNVTPEVKSRGMKFAE - M N V K S 0 0 1 0 0 0 1 0 0 0 0 1 1 0 1 0 1 0 0 2 0 8 0 916.4688 Q5T3I0;F8W895;E9PPY4;F2Z3C6 Q5T3I0 1 8 GPATCH4 G patch domain-containing protein 4 yes no 2 0.021406 67.897 By matching By matching By matching By matching By MS/MS By matching 1 1 2722800 0 0 0 0 980170 1742700 5266 1191 5342 23508;23509 15577 15577 1 MNVTPEVKSR ________________ VTPEVKSRGMKFAEEQ - M N S R G 0 1 1 0 0 0 1 0 0 0 0 1 1 0 1 1 1 0 0 2 0 10 1 1159.6019 Q5T3I0;F8W895;E9PPY4;F2Z3C6 Q5T3I0 1 10 GPATCH4 G patch domain-containing protein 4 yes no 2 0.028768 61.213 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 4850800 0 1077400 1909000 1574600 0 289750 5267 1191 5343 23510;23511;23512;23513;23514 15578;15579;15580 15578 3 MNYCRNPDGEPRPWCFTTDPQK KFPNKNLKMNYCRNPD CFTTDPQKRWEFCDIP K M N Q K R 0 2 2 2 2 1 1 1 0 0 0 1 1 1 4 0 2 1 1 0 0 22 2 2768.1894 CON__P06868 CON__P06868 238 259 yes yes 3;4 5.1224E-10 88.486 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 370670000 97808000 22135000 70594000 51889000 26203000 102040000 + 5268 295 5344;5345 23515;23516;23517;23518;23519;23520;23521;23522;23523;23524;23525;23526 15581;15582;15583;15584;15585;15586;15587;15588;15589;15590;15591;15592 15585 26 12 MPCQSLQPEPINTPTHTK SEKGKITKMPCQSLQP INTPTHTKQQLKASLG K M P T K Q 0 0 1 0 1 2 1 0 1 1 1 1 1 0 4 1 3 0 0 0 0 18 0 2077.9925 P46013;F5H4V4;P46013-2 P46013 1005 1022 MKI67 Antigen KI-67 no no 3 0.0010537 78.225 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 13985000 1400000 2570000 2055900 1433200 548850 5977200 5269 919;920 5346 23527;23528;23529;23530;23531;23532 15593;15594;15595;15596 15595 4 MPGSVIPPPLVRGGQQASSK SLQTSSARMPGSVIPP GGQQASSKLGPQASSQ R M P S K L 1 1 0 0 0 2 0 3 0 1 1 1 1 0 4 3 0 0 0 2 0 20 1 2005.0779 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7 Q86YP4 214 233 GATAD2A Transcriptional repressor p66-alpha yes no 3 3.6614E-07 88.319 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 27227000 0 6905800 5899900 0 0 14421000 5270 170 5347 23533;23534;23535 15597;15598;15599 15599 3 MPKMKMPTFSTPGAK HGPEWNLKMPKMKMPT TFSTPGAKGEGPDVHM K M P A K G 1 0 0 0 0 0 0 1 0 0 0 3 3 1 3 1 2 0 0 0 0 15 2 1650.8296 Q09666 Q09666 628 642 AHNAK Neuroblast differentiation-associated protein AHNAK yes yes 2 0.007711 57.53 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 5271 1054 5348 23536 15600 15600 128;129 1 MPTKEDEEEDEPVVIK FALKNRIRMPTKEDEE EDEPVVIKAQPVPHYG R M P I K A 0 0 0 2 0 0 5 0 0 1 0 2 1 0 2 0 1 0 0 2 0 16 1 1886.8819 Q9ULW0;Q96RR5 Q9ULW0 497 512 TPX2;HCA90 Targeting protein for Xklp2 yes no 2;3 2.3557E-37 114.01 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 3 2 2 3 27265000 0 3301800 5033600 2394300 1278400 15257000 5272 1611 5349 23537;23538;23539;23540;23541;23542;23543;23544;23545;23546;23547 15601;15602;15603;15604;15605;15606;15607 15607 7 MPVIQTESEHK ________________ IQTESEHKPPVNGSYF - M P H K P 0 0 0 0 0 1 2 0 1 1 0 1 1 0 1 1 1 0 0 1 0 11 0 1297.6336 E9PJU8;Q9H0W9-4 E9PJU8 1 11 C11orf54 yes no 2 0.018237 43.419 By matching By matching By matching By matching By MS/MS By matching 1 1101700 0 0 0 0 1101700 0 5273 450 5350 23548 15608 15608 50 0 MPWVEPK ________________ ________________ - M P P K P 0 0 0 0 0 0 1 0 0 0 0 1 1 0 2 0 0 1 0 1 0 7 0 885.44186 Q3KNS1;I3L499 Q3KNS1 1 7 PTCHD3 Patched domain-containing protein 3 yes no 2 0.029778 46.37 By matching By matching By matching By matching By matching By MS/MS 1 2 2185500 0 0 254360 0 0 1931200 5274 685 5351 23549;23550;23551 15609;15610 15609 68 0 MQASIEKGGSLPK SVEDIKAKMQASIEKG EKGGSLPKVEAKFINY K M Q P K V 1 0 0 0 0 1 1 2 0 1 1 2 1 0 1 2 0 0 0 0 0 13 1 1344.7071 P06748-2;P06748 P06748-2 222 234 NPM1 Nucleophosmin yes no 2;3 7.9807E-60 132.86 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 4 2 2 3 3 286360000 84633000 38645000 20383000 26027000 73595000 43075000 5275 801 5352;5353 23552;23553;23554;23555;23556;23557;23558;23559;23560;23561;23562;23563;23564;23565;23566;23567;23568;23569 15611;15612;15613;15614;15615;15616;15617;15618;15619;15620;15621;15622 15621 80 11 MQASIEKGGSLPKVEAK SVEDIKAKMQASIEKG SLPKVEAKFINYVKNC K M Q A K F 2 0 0 0 0 1 2 2 0 1 1 3 1 0 1 2 0 0 0 1 0 17 2 1771.9502 P06748-2;P06748 P06748-2 222 238 NPM1 Nucleophosmin yes no 3;4 0.0005298 85.988 By MS/MS By matching By matching By matching By MS/MS By matching 2 2 2 2 1 1 70987000 50847000 4990300 5955600 6998500 0 2196500 5276 801 5354 23570;23571;23572;23573;23574;23575;23576;23577;23578;23579 15623;15624;15625 15624 2 MQDKTQMQEKAK LACEDFKKMQDKTQMQ TQMQEKAKEIYMTFLS K M Q A K E 1 0 0 1 0 3 1 0 0 0 0 3 2 0 0 0 1 0 0 0 0 12 2 1464.7065 O43665-2;O43665;O43665-3 O43665-2 66 77 RGS10 Regulator of G-protein signaling 10 yes no 2 0.035797 40.516 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 5277 718 5355 23580 15626 15626 74;75 1 MQIKRNTNSVPETAPAAIPETK LTDKKRERMQIKRNTN PAAIPETKRNAEFLTC R M Q T K R 3 1 2 0 0 1 2 0 0 2 0 2 1 0 3 1 3 0 0 1 0 22 2 2395.2529 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 363 384 ADAR Double-stranded RNA-specific adenosine deaminase no no 4 0.0065234 41.615 By matching By matching By MS/MS By matching By matching By matching 1 1 3222600 1725600 0 1497000 0 0 0 5278 352;968 5356 23581;23582 15627 15627 1 MQKENHFLIFVK IFRSHLDKMQKENHFL NHFLIFVKSWNTEAGV K M Q V K S 0 0 1 0 0 1 1 0 1 1 1 2 1 2 0 0 0 0 0 1 0 12 1 1532.8174 Q08AF3;Q08AF3-2;B4E128 Q08AF3 89 100 SLFN5 Schlafen family member 5 yes no 3 0.0018523 81.625 By matching By matching By matching By MS/MS By matching By matching 1 5476400 0 0 0 5476400 0 0 5279 1049 5357 23583 15628 15628 1 MQNDTAENETTEKEEK SLSLPSRRMQNDTAEN ETTEKEEKSESRQERY R M Q E K S 1 0 2 1 0 1 5 0 0 0 0 2 1 0 0 0 3 0 0 0 0 16 1 1895.8055 Q05682-5;E9PGZ1;Q05682-4;F5H1Z9;E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;C9J813 Q05682-5 131 146 CALD1 Caldesmon yes no 3 0.0014774 78.615 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 4172300 536800 0 755470 500880 944300 1434900 5280 396 5358 23584;23585;23586;23587;23588 15629 15629 1 MQNSHSGVNQLGGVFVNGRPLPDSTRQK ________________ LPDSTRQKIVELAHSG - M Q Q K I 0 2 3 1 0 3 0 4 1 0 2 1 1 1 2 3 1 0 0 3 0 28 2 3022.5155 P26367;E9PKM0;B1B1I8;B1B1I9;B1B1J0;P26367-2 P26367 1 28 PAX6 Paired box protein Pax-6 no no 4 4.4067E-19 71.678 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 64884000 0 11584000 34718000 18583000 0 0 5281 877;878 5359 23589;23590;23591 15630;15631;15632 15632 3 MQQENMKPQEQLTLEPYER VFASEVKKMQQENMKP LTLEPYERDHAVVVGV K M Q E R D 0 1 1 0 0 4 4 0 0 0 2 1 2 0 2 0 1 0 1 0 0 19 1 2391.1199 P22087 P22087 286 304 FBL rRNA 2-O-methyltransferase fibrillarin yes yes 3 4.9555E-65 119.68 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 2 3 2 1 2 56115000 8062800 17276000 0 14658000 10895000 5222400 5282 862 5360;5361 23592;23593;23594;23595;23596;23597;23598;23599;23600;23601 15633;15634;15635;15636;15637;15638;15639 15634 93;94 7 MQQEVVEMR QELEKSMKMQQEVVEM QQEVVEMRKKNEEFKK K M Q M R K 0 1 0 0 0 2 2 0 0 0 0 0 2 0 0 0 0 0 0 2 0 9 0 1148.5318 Q9ULW0;Q96RR5 Q9ULW0 221 229 TPX2;HCA90 Targeting protein for Xklp2 yes no 2 0.00055692 110.53 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 40374000 2496200 6562300 5291600 3856000 6483200 15685000 5283 1611 5362 23602;23603;23604;23605;23606;23607 15640;15641;15642;15643;15644;15645 15643 6 MQQEVVEMRK QELEKSMKMQQEVVEM QEVVEMRKKNEEFKKL K M Q R K K 0 1 0 0 0 2 2 0 0 0 0 1 2 0 0 0 0 0 0 2 0 10 1 1276.6268 Q9ULW0;Q96RR5 Q9ULW0 221 230 TPX2;HCA90 Targeting protein for Xklp2 yes no 2;3 0.00024231 106.16 By matching By matching By MS/MS By matching By matching By MS/MS 1 2 2 2 1 2 87343000 4159300 11537000 23390000 7525900 13245000 27485000 5284 1611 5363 23608;23609;23610;23611;23612;23613;23614;23615;23616;23617 15646;15647;15648 15648 3 MQQEVVEMRKK QELEKSMKMQQEVVEM EVVEMRKKNEEFKKLA K M Q K K N 0 1 0 0 0 2 2 0 0 0 0 2 2 0 0 0 0 0 0 2 0 11 2 1404.7217 Q9ULW0;Q96RR5 Q9ULW0 221 231 TPX2;HCA90 Targeting protein for Xklp2 yes no 3 0.0071605 88.134 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 14133000 1094500 2040400 4533900 2701700 1640600 2122300 5285 1611 5364 23618;23619;23620;23621;23622;23623 15649;15650;15651 15650 3 MQSTLISAAR IMNDLEKKMQSTLISA STLISAARDLGLDPGK K M Q A R D 2 1 0 0 0 1 0 0 0 1 1 0 1 0 0 2 1 0 0 0 0 10 0 1076.5648 B4E2Z2;P43246;E9PHA6;E7EU21;B4DL39;B4DSB9;E9PCI8 B4E2Z2 426 435 MSH2 DNA mismatch repair protein Msh2 yes no 2 0.022744 61.344 By matching By matching By matching By matching By matching By MS/MS 1 1 3095500 0 0 0 0 521550 2573900 5286 162 5365 23624;23625 15652 15652 1 MRATPLAAPAGSLSR ________________ APAGSLSRKKRLELDD - M R S R K 4 2 0 0 0 0 0 1 0 0 2 0 1 0 2 2 1 0 0 0 0 15 1 1497.8086 B0QYQ2;Q96RU7 B0QYQ2 1 15 TRIB3 Tribbles homolog 3 yes no 3 0.013526 45.614 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1468200 743360 0 0 0 724890 0 5287 57 5366 23626;23627 15653;15654 15654 2 MRDSTGAGNSLVHK ________________ AGNSLVHKRSPLRRNQ - M R H K R 1 1 1 1 0 0 0 2 1 0 1 1 1 0 0 2 1 0 0 1 0 14 1 1471.7202 B1AKT6;Q9Y483 B1AKT6 1 14 MTF2 Metal-response element-binding transcription factor 2 yes no 3 0.0052404 56.46 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 2339300 503810 338380 502910 566620 427550 0 5288 62 5367 23628;23629;23630;23631;23632 15655;15656 15656 2 MREIVHLQAGQCGNQIGAK ________________ CGNQIGAKFWEVISDE - M R A K F 2 1 1 0 1 3 1 3 1 2 1 1 1 0 0 0 0 0 0 1 0 19 1 2109.0572 P68371;B4DFH6;B4DJ43;P04350 P68371 1 19 TUBB4B;TUBB4A Tubulin beta-4B chain;Tubulin beta-4A chain yes no 3;4 4.3454E-262 172.42 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 4 4 4 6 4 302030000 39958000 47425000 57153000 46530000 37430000 73534000 5289 1007 5368;5369 23633;23634;23635;23636;23637;23638;23639;23640;23641;23642;23643;23644;23645;23646;23647;23648;23649;23650;23651;23652;23653;23654;23655;23656;23657;23658;23659 15657;15658;15659;15660;15661;15662;15663;15664;15665;15666;15667;15668;15669;15670;15671;15672;15673;15674;15675;15676 15667 121 20 MRQIASNSPGSSPK ALSCHGSRMRQIASNS NSPGSSPKTSDPTQDL R M R P K T 1 1 1 0 0 1 0 1 0 1 0 1 1 0 2 4 0 0 0 0 0 14 1 1458.7249 Q9C0D5;Q9C0D5-2 Q9C0D5 437 450 TANC1 Protein TANC1 yes no 3 0.038671 39.746 By matching By matching By matching By matching By matching By MS/MS 1 1 949760 0 0 0 0 527240 422520 5290 1473 5370 23660;23661 15677 15677 1 MRSSPALFSSR ________________ SPALFSSRAAPQKPRK - M R S R A 1 2 0 0 0 0 0 0 0 0 1 0 1 1 1 4 0 0 0 0 0 11 1 1237.6237 O43236-4 O43236-4 1 11 yes yes 3 0.010726 58.511 By matching By matching By MS/MS By matching By matching By matching 1 0 0 0 0 0 0 0 5291 712 5371 23662 15678 15678 73 1 MSAATVLSR NLLETQGRMSAATVLS SAATVLSREPYMCAQC R M S S R E 2 1 0 0 0 0 0 0 0 0 1 0 1 0 0 2 1 0 0 1 0 9 0 934.4906 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7;F5H7D9;H7C3H1 Q86YP4 404 412 GATAD2A Transcriptional repressor p66-alpha yes no 2 0.013568 79.489 By matching By matching By matching By matching By matching By MS/MS 1 1 6093100 0 2222800 0 0 0 3870300 5292 170 5372 23663;23664 15679 15679 1 MSAATVLSREPYMCAQCK NLLETQGRMSAATVLS PYMCAQCKTDFTCRWR R M S C K T 3 1 0 0 2 1 1 0 0 0 1 1 2 0 1 2 1 0 1 1 0 18 1 2101.9417 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7;F5H7D9;H7C3H1 Q86YP4 404 421 GATAD2A Transcriptional repressor p66-alpha yes no 3 8.1351E-156 151.8 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 67293000 0 819800 0 0 0 66473000 5293 170 5373;5374 23665;23666;23667 15680;15681;15682 15680 14 3 MSAVDGQRQVGVGYVDSIQRK SIGVVGVKMSAVDGQR YVDSIQRKLGLCEFPD K M S R K L 1 2 0 2 0 3 0 3 0 1 0 1 1 0 0 2 0 0 1 4 0 21 2 2292.1645 B4E2Z2;P43246;E9PHA6;E7EU21;E7EQQ1;C9J809 B4E2Z2 86 106 MSH2 DNA mismatch repair protein Msh2 yes no 3;4 4.0791E-06 81.316 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 2 1 25067000 3651400 2052600 17329000 0 0 2033900 5294 162 5375 23668;23669;23670;23671;23672 15683;15684;15685;15686;15687 15684 5 MSAVSQDAIEDSR KVLTWDGKMSAVSQDA QDAIEDSRQARTETVV K M S S R Q 2 1 0 2 0 1 1 0 0 1 0 0 1 0 0 3 0 0 0 1 0 13 0 1407.63 Q9P275;Q9P275-2;E9PEW0 Q9P275 1047 1059 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 5.546E-75 142.38 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 2 42207000 2910000 7231800 5615000 3838200 7925600 14686000 5295 1576 5376;5377 23673;23674;23675;23676;23677;23678;23679;23680 15688;15689;15690;15691;15692;15693;15694;15695 15691 177 7 MSAVSQDAIEDSRQAR KVLTWDGKMSAVSQDA IEDSRQARTETVVDDW K M S A R T 3 2 0 2 0 2 1 0 0 1 0 0 1 0 0 3 0 0 0 1 0 16 1 1762.8268 Q9P275;Q9P275-2;E9PEW0 Q9P275 1047 1062 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 3 0.0011647 79.875 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 37705000 7674000 3740600 6743000 6939300 4975000 7633600 5296 1576 5378 23681;23682;23683;23684;23685;23686 15696;15697;15698;15699;15700;15701 15696 6 MSELSSSRPK IKEKSKFRMSELSSSR ELSSSRPKRRKTAVQY R M S P K R 0 1 0 0 0 0 1 0 0 0 1 1 1 0 1 4 0 0 0 0 0 10 1 1120.5547 Q14527;Q14527-2;E7ESN4;F5H3D6 Q14527 377 386 HLTF Helicase-like transcription factor yes no 2 0.011123 88.056 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 3056100 0 876490 2179600 0 0 0 5297 1107 5379 23687;23688 15702;15703 15703 2 MSFPTLQDHRK PYDCKKCRMSFPTLQD PTLQDHRKHIHEVHSK R M S R K H 0 1 0 1 0 1 0 0 1 0 1 1 1 1 1 1 1 0 0 0 0 11 1 1358.6765 Q9NUA8;F8WAI8 Q9NUA8 957 967 ZBTB40 Zinc finger and BTB domain-containing protein 40 yes no 3 0.012788 53.08 By MS/MS By matching By matching By matching By MS/MS By MS/MS 2 1 1 1 4284800 1072400 780640 0 0 896330 1535400 5298 1545 5380 23689;23690;23691;23692;23693 15704;15705;15706 15705 3 MSFRGFNPEVEK CEDLLYGRMSFRGFNP GFNPEVEKLMLQMNAK R M S E K L 0 1 1 0 0 0 2 1 0 0 0 1 1 2 1 1 0 0 0 1 0 12 1 1439.6867 Q99547;H3BSB3;H3BNT4 Q99547 75 86 MPHOSPH6 M-phase phosphoprotein 6 yes no 3 0.0018294 78.705 By matching By matching By matching By matching By matching By MS/MS 1 10072000 0 0 0 0 0 10072000 5299 1427 5381 23694 15707 15707 1 MSGALDVLQMK ________________ ALDVLQMKEEDVLKFL - M S M K E 1 0 0 1 0 1 0 1 0 0 2 1 2 0 0 1 0 0 0 1 0 11 0 1191.5992 C9JQR9;C9J9K3;P08865;A6NE09 C9JQR9 1 11 RPSAP58;RPSA 40S ribosomal protein SA yes no 2 0.0092214 43.68 By matching By MS/MS By matching By matching By matching By matching 1 1 843330 0 183120 0 0 0 660210 5300 16 5382 23695;23696 15708 15708 3;4 0 MSLIDLAGSERASSTHAK TQAVQVAKMSLIDLAG RASSTHAKGERLREGA K M S A K G 3 1 0 1 0 0 1 1 1 1 2 1 1 0 0 4 1 0 0 0 0 18 1 1872.9364 H9KV46;Q86Y91;Q86Y91-2;Q86Y91-3;Q86Y91-4 H9KV46 250 267 KIF18B Kinesin-like protein KIF18B yes no 4 0.00036625 71.08 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 8415900 0 2882100 0 5533800 0 0 5301 675 5383 23697;23698 15709;15710 15709 2 MSMKEVDEQMLNVQNK VAAVFRGRMSMKEVDE QMLNVQNKNSSYFVEW R M S N K N 0 0 2 1 0 2 2 0 0 0 1 2 3 0 0 1 0 0 0 2 0 16 1 1922.89 P68371;E7EWR1;Q5ST81;F5H8C9;Q9BVA1;Q13885;F5H894;F8VUJ7;Q5JP53;F8VYX6;F8VW92;P07437 P68371 321 336 TUBB4B;TUBB;TUBB2B;TUBB2A Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta chain no no 3 1.0432E-15 100.18 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 23374000 0 0 0 0 0 23374000 5302 1007;542 5384 23699;23700 15711;15712 15712 2 MSMTGAGKSPPSVQSLAMR GSCPSRAKMSMTGAGK SVQSLAMRLLSMPGAQ K M S M R L 2 1 0 0 0 1 0 2 0 0 1 1 3 0 2 4 1 0 0 1 0 19 1 1934.9376 Q96KQ7-2;B0UZY3;Q96KQ7;B0UZY0;A2ABF8;B0UZY1;A2ABF9;Q96KQ7-3 Q96KQ7-2 132 150 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes no 3 0.018976 37.925 By matching By MS/MS By matching By matching By matching By matching 1 3772100 0 3772100 0 0 0 0 5303 7 5385 23701 15713 15713 1 MSPSGGAPQTTPTLR NWKESANKMSPSGGAP PQTTPTLRSRPKDLPV K M S L R S 1 1 0 0 0 1 0 2 0 0 1 0 1 0 3 2 3 0 0 0 0 15 0 1499.7402 Q9BY89 Q9BY89 1153 1167 KIAA1671 Uncharacterized protein KIAA1671 yes yes 2 0.0084626 65.038 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2705000 0 0 923060 0 0 1782000 5304 1466 5386 23702;23703;23704 15714;15715;15716;15717 15714 4 MSPYKDILETHLREK VNLMKALKMSPYKDIL LETHLREKITAQSIEE K M S E K I 0 1 0 1 0 0 2 0 1 1 2 2 1 0 1 1 1 0 1 0 0 15 2 1858.9611 P78527;E7EUY0;P78527-2 P78527 1408 1422 PRKDC DNA-dependent protein kinase catalytic subunit yes no 4 1.833E-13 103.13 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 44359000 9766600 481980 23300000 3902100 2776100 4132200 5305 1012 5387 23705;23706;23707;23708;23709;23710 15718;15719;15720;15721;15722 15719 5 MSQLFHR LFGPLGPRMSQLFHRT RMSQLFHRTIGSGASS R M S H R T 0 1 0 0 0 1 0 0 1 0 1 0 1 1 0 1 0 0 0 0 0 7 0 917.45416 Q14CA3;Q14669;Q14CF1 Q14CA3 471 477 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 2 0.019919 105.39 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1514200 0 0 205320 104840 0 1204100 5306 1122 5388 23711;23712;23713 15723 15723 1 MSSLGAGVTSAK SKVNGVTRMSSLGAGV GAGVTSAKKMREVRPS R M S A K K 2 0 0 0 0 0 0 2 0 0 1 1 1 0 0 3 1 0 0 1 0 12 0 1107.5594 B7Z8L0;Q92833;B7Z7X9;Q92833-2;F5H590 B7Z8L0 140 151 JARID2 Protein Jumonji yes no 2 0.017639 53.034 By matching By matching By matching By matching By matching By MS/MS 1 1 1384800 0 0 448270 0 0 936490 5307 195 5389 23714;23715 15724 15724 1 MSSPLADAK RILQSLEKMSSPLADA SSPLADAKRIPSIVSS K M S A K R 2 0 0 1 0 0 0 0 0 0 1 1 1 0 1 2 0 0 0 0 0 9 0 918.44807 P49790;F6QR24;Q4LE47 P49790 318 326 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 2 0.0061789 99.013 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 1 1 1 1 20778000 4951100 2296900 4574500 2372700 3063500 3519000 5308 531 5390 23716;23717;23718;23719;23720;23721;23722;23723 15725;15726;15727;15728;15729 15727 5 MSTSQNSIPFEHHGK TGRQDTSRMSTSQNSI IPFEHHGK________ R M S G K - 0 0 1 0 0 1 1 1 2 1 0 1 1 1 1 3 1 0 0 0 0 15 0 1698.7784 P48730-2;B4DIJ9 P48730-2 395 409 CSNK1D Casein kinase I isoform delta yes no 3;4 0.0060073 50.102 By matching By matching By MS/MS By matching By MS/MS By matching 2 2 2 2 2 2 22454000 1414300 3736900 4274000 1615700 2022900 9389900 5309 932 5391 23724;23725;23726;23727;23728;23729;23730;23731;23732;23733;23734;23735 15730;15731;15732;15733 15730 4 MSTVSELR SLRSRSTRMSTVSELR MSTVSELRITAQENDM R M S L R I 0 1 0 0 0 0 1 0 0 0 1 0 1 0 0 2 1 0 0 1 0 8 0 921.45897 B7Z6Q6;Q99661;Q99661-2;Q5JR91;B7Z7M6;Q5JR89 B7Z6Q6 114 121 KIF2C Kinesin-like protein KIF2C yes no 2 0.0064013 107.01 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 14279000 0 4671400 5752000 0 3855900 0 5310 193 5392 23736;23737;23738 15734;15735 15735 2 MSVDAVEIETLRK KSTTQANRMSVDAVEI VEIETLRKTVEDYFCF R M S R K T 1 1 0 1 0 0 2 0 0 1 1 1 1 0 0 1 1 0 0 2 0 13 1 1489.781 P78347-2;P78347-4;P78347-3;B4DH52;P78347;Q86U51 P78347-2 102 114 GTF2I General transcription factor II-I yes no 3 0.035108 63.181 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 5311 90 5393 23739 15736 15736 1 MTEADVNPK ________________ TEADVNPKAYPLADAH - M T P K A 1 0 1 1 0 0 1 0 0 0 0 1 1 0 1 0 1 0 0 1 0 9 0 1003.4644 P55769 P55769 1 9 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes yes 2 0.0088116 72.243 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 8163400 1082200 678310 623940 1331000 2451500 1996400 5312 969 5394 23740;23741;23742;23743;23744;23745 15737;15738 15737 2 MTGEEGKEVITEIEK AYLTLTSRMTGEEGKE EVITEIEKKLPRLYKV R M T E K K 0 0 0 0 0 0 5 2 0 2 0 2 1 0 0 0 2 0 0 1 0 15 1 1691.8288 Q5UIP0-2;Q5UIP0;H7BZN3;C9J1D6;B4DS49 Q5UIP0-2 37 51 RIF1 Telomere-associated protein RIF1 yes no 2;3 0.0012736 69.261 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 6073600 2460100 1073800 0 0 0 2539800 5313 1201 5395 23746;23747;23748 15739;15740 15739 2 MTHNLLLNYGLYRK PMKPHRIRMTHNLLLN LNYGLYRKMEIYRPHK R M T R K M 0 1 2 0 0 0 0 1 1 0 4 1 1 0 0 0 1 0 2 0 0 14 1 1734.9239 Q92769;H3BM24;B3KRS5;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;E5RK19;Q13547;Q5TEE2 Q13547 37 50 HDAC2;HDAC1 Histone deacetylase 2;Histone deacetylase;Histone deacetylase 1 no no 3;4 5.7657E-104 143.55 By matching By matching By MS/MS By MS/MS By matching By MS/MS 2 1 1 3 327010000 0 0 54360000 3108900 5110800 264430000 5314 1086;1358 5396;5397 23749;23750;23751;23752;23753;23754;23755 15741;15742;15743;15744;15745;15746;15747;15748;15749 15748 131 9 MTLDQQHIETPGQNIPTK PVPALQSKMTLDQQHI PGQNIPTKVTSAVVGP K M T T K V 0 0 1 1 0 3 1 1 1 2 1 1 1 0 2 0 3 0 0 0 0 18 0 2050.0153 C9JJ88;Q2KHR3-2;Q2KHR3 C9JJ88 701 718 QSER1 Glutamine and serine-rich protein 1 yes no 3 1.5237E-08 93.427 By MS/MS By matching By matching By matching By matching By matching 1 5769300 5769300 0 0 0 0 0 5315 253 5398 23756 15750 15750 1 MTPFPATSAAPEPHPSTSTAQPVTPKPTSQATR IRTRKSSRMTPFPATS KPTSQATRSRTNRSSV R M T T R S 5 1 0 0 0 2 1 0 1 0 0 1 1 1 8 4 7 0 0 1 0 33 1 3388.6722 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;H0Y6Z8 Q14676 1115 1147 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 4 3.2558E-19 65.165 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 88882000 48963000 0 25293000 0 14625000 0 5316 1109 5399 23757;23758;23759 15751;15752;15753 15751 3 MTSAPSQPLQTISR DPKSSSSRMTSAPSQP QPLQTISRNKPSGITR R M T S R N 1 1 0 0 0 2 0 0 0 1 1 0 1 0 2 3 2 0 0 0 0 14 0 1515.7715 Q5T670;Q7L590-2;Q7L590 Q5T670 206 219 MCM10 Protein MCM10 homolog yes no 2 0.0032268 60.196 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3357600 534380 500340 0 0 1528700 794240 5317 1193 5400 23760;23761;23762;23763 15754 15754 1 MTSLETKTSDTETEPSK KTPRNTYKMTSLETKT DTETEPSKTVSTANRS K M T S K T 0 0 0 1 0 0 3 0 0 0 1 2 1 0 1 3 5 0 0 0 0 17 1 1883.867 P46013;F5H4V4;P46013-2 P46013 851 867 MKI67 Antigen KI-67 no no 2;3 2.5332E-73 127.61 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 3 2 44682000 9471200 8856600 7825900 4180400 5447000 8900400 5318 919;920 5401 23764;23765;23766;23767;23768;23769;23770;23771;23772;23773;23774;23775 15755;15756;15757;15758;15759;15760;15761;15762 15762 8 MTVEYVYER NDTAQFNRMTVEYVYE TVEYVYERMTGLRWKC R M T E R M 0 1 0 0 0 0 2 0 0 0 0 0 1 0 0 0 1 0 2 2 0 9 0 1188.5485 O15226;G3V1N1 O15226 464 472 NKRF NF-kappa-B-repressing factor yes no 2 0.022125 68.657 By matching By matching By matching By matching By matching By MS/MS 1 1 1 6914100 0 0 0 812690 350650 5750800 5319 578 5402 23776;23777;23778 15763 15763 1 MTVNNLHPR LSPLEGTKMTVNNLHP TVNNLHPRVTEEDIVE K M T P R V 0 1 2 0 0 0 0 0 1 0 1 0 1 0 1 0 1 0 0 1 0 9 0 1080.5498 Q9BY77;Q9BY77-2;B4DMM2 Q9BY77 282 290 POLDIP3 Polymerase delta-interacting protein 3 yes no 2 7.3486E-15 120.87 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 5320 1465 5403 23779 15764 15764 1 MVAAANEIAKER SLRELRARMVAAANEI ANEIAKERRKQDVVNR R M V E R R 4 1 1 0 0 0 2 0 0 1 0 1 1 0 0 0 0 0 0 1 0 12 1 1301.6762 Q8IWC1-2;Q8IWC1;Q8IWC1-3 Q8IWC1-2 23 34 MAP7D3 MAP7 domain-containing protein 3 yes no 3 0.015966 75.819 By matching By matching By MS/MS By matching By matching By matching 1 0 0 0 0 0 0 0 5321 1280 5404 23780 15765 15765 1 MVAAVACAQVPK GIAKDGAKMVAAVACA VACAQVPKITLIIGGS K M V P K I 4 0 0 0 1 1 0 0 0 0 0 1 1 0 1 0 0 0 0 3 0 12 0 1243.6417 D6RD67;Q9HCC0-2;Q9HCC0 D6RD67 197 208 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes no 2 2.8555E-09 107.06 By matching By matching By matching By matching By matching By MS/MS 1 1 2203000 0 0 418330 0 0 1784700 5322 326 5405 23781;23782 15766 15766 1 MVAIDCEMVGTGPKGHVSSLAR ASQKLPRKMVAIDCEM GHVSSLARCSIVNYNG K M V A R C 2 1 0 1 1 0 1 3 1 1 1 1 2 0 1 2 1 0 0 3 0 22 1 2314.1232 Q9H9L3 Q9H9L3 179 200 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 yes yes 3;4 8.1202E-34 105.79 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 2 2 1 56798000 4086900 12667000 0 22097000 0 17947000 5323 1509 5406 23783;23784;23785;23786;23787;23788 15767;15768;15769;15770;15771;15772 15768 6 MVCSPVTVR ________________ VCSPVTVRIAPPDRRF - M V V R I 0 1 0 0 1 0 0 0 0 0 0 0 1 0 1 1 1 0 0 3 0 9 0 1047.5205 Q96HA1-2;A8CG34-2;Q96HA1-3;A8MXF9;A8CG34;Q96HA1;A8MY32 Q96HA1-2 1 9 POM121;POM121C Nuclear envelope pore membrane protein POM 121;Nuclear envelope pore membrane protein POM 121C yes no 2 0.029695 64.654 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 9357100 594100 949250 835250 802870 2385900 3789800 5324 34 5407 23789;23790;23791;23792;23793;23794 15773;15774 15773 2 MVDNRGFMVTR ________________ NRGFMVTRSYTVGVMM - M V T R S 0 2 1 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 0 2 0 11 1 1324.638 E9PKH2;B4DN87;P50454;E9PK86;E9PMI5;E9PR70;E9PPV6 E9PKH2 1 11 SERPINH1 Serpin H1 yes no 3 0.021966 54.784 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 4988000 0 0 585920 681540 1983300 1737300 5325 108 5408 23795;23796;23797;23798 15775 15775 1 MVFQENSR NTVNDFWRMVFQENSR MVFQENSRVIVMTTKE R M V S R V 0 1 1 0 0 1 1 0 0 0 0 0 1 1 0 1 0 0 0 1 0 8 0 1009.4651 Q06124;Q06124-2;Q06124-3 Q06124 344 351 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes no 2 0.0080229 98.629 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 3542000 0 261490 0 0 1354300 1926100 5326 1040 5409 23799;23800;23801 15776;15777 15776 2 MVGTTSVVK KLEDDKEKMVGTTSVV VGTTSVVKNSHEEVVQ K M V V K N 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 1 2 0 0 3 0 9 0 920.5001 Q2TAL8 Q2TAL8 361 369 QRICH1 Glutamine-rich protein 1 yes yes 2 0.025209 66.962 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 12675000 1044700 1473800 3293900 1193800 2127400 3541100 5327 1162 5410 23802;23803;23804;23805;23806;23807 15778 15778 1 MVKQPCPSESDIITEEDK PKPRGRPKMVKQPCPS DIITEEDKSKKKGQEE K M V D K S 0 0 0 2 1 1 3 0 0 2 0 2 1 0 2 2 1 0 0 1 0 18 1 2104.9657 O75475;O75475-2 O75475 199 216 PSIP1 PC4 and SFRS1-interacting protein yes no 3 0.0040835 48.372 By matching By MS/MS By matching By matching By matching By matching 1 1 1925200 0 763100 0 0 0 1162100 5328 741 5411 23808;23809 15779 15779 1 MVKQPCPSESDIITEEDKSK PKPRGRPKMVKQPCPS ITEEDKSKKKGQEEKQ K M V S K K 0 0 0 2 1 1 3 0 0 2 0 3 1 0 2 3 1 0 0 1 0 20 2 2320.0927 O75475;O75475-2 O75475 199 218 PSIP1 PC4 and SFRS1-interacting protein yes no 4 0.00011703 67.396 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 8971600 2165500 1385700 2162300 0 0 3258200 5329 741 5412 23810;23811;23812;23813 15780;15781;15782;15783;15784;15785 15782 6 MVLCSQQWK KDVPSTERMVLCSQQW VLCSQQWKLLSQKEKD R M V W K L 0 0 0 0 1 2 0 0 0 0 1 1 1 0 0 1 0 1 0 1 0 9 0 1178.5576 E9PKP7;P17480-2;P17480 E9PKP7 288 296 UBTF Nucleolar transcription factor 1 yes no 2 6.2868E-42 141.52 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 14490000 0 3599900 1568600 1211900 8109600 0 5330 455 5413 23814;23815;23816;23817 15786;15787;15788 15787 3 MVNDAEPDTK KKKKKKRKMVNDAEPD NDAEPDTKKAKTENKG K M V T K K 1 0 1 2 0 0 1 0 0 0 0 1 1 0 1 0 1 0 0 1 0 10 0 1118.4914 Q9NVP1 Q9NVP1 117 126 DDX18 ATP-dependent RNA helicase DDX18 yes yes 2 0.0085553 81.625 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 4472500 634310 886280 2080300 390230 215690 265710 5331 1550 5414 23818;23819;23820;23821;23822;23823 15789;15790 15789 2 MVPSEFSTGPVEK MEAMSENKMVPSEFST FSTGPVEKAAKPLPFK K M V E K A 0 0 0 0 0 0 2 1 0 0 0 1 1 1 2 2 1 0 0 2 0 13 0 1406.6752 Q6PI98;Q6PI98-3;E9PCS7 Q6PI98 64 76 INO80C INO80 complex subunit C yes no 2 0.0029511 64.313 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 6022400 4098800 511720 0 0 0 1411900 5332 417 5415 23824;23825;23826 15791;15792 15792 2 MVRESVEQQADSFK AVSDCFWKMVRESVEQ EQQADSFKATRFNLET K M V F K A 1 1 0 1 0 2 2 0 0 0 0 1 1 1 0 2 0 0 0 2 0 14 1 1652.7828 O60313;E5KLK1;E5KLJ6;E5KLJ9;O60313-2;E5KLJ5 O60313 555 568 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 3 0.001128 74.789 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 8638500 0 0 1534600 1046600 2025200 4032100 5333 336 5416 23827;23828;23829;23830 15793;15794;15795;15796 15795 4 MVSAAFMK GTKKKKEKMVSAAFMK MVSAAFMKKYIHVAKI K M V M K K 2 0 0 0 0 0 0 0 0 0 0 1 2 1 0 1 0 0 0 1 0 8 0 883.42958 P25205;Q7Z6P5;E9PF11 P25205 562 569 MCM3 DNA replication licensing factor MCM3 yes no 1;2 0.013989 86.794 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 2 1 2 48875000 4151200 6845900 10566000 5998000 1782800 19532000 5334 873 5417 23831;23832;23833;23834;23835;23836;23837;23838 15797;15798;15799;15800 15799 4 MVSAEISENRK GMQAASSKMVSAEISE AEISENRKRQWPTKSQ K M V R K R 1 1 1 0 0 0 2 0 0 1 0 1 1 0 0 2 0 0 0 1 0 11 1 1262.6289 Q6IQ49-2;C9JIQ2;Q6IQ49;Q6IQ49-3 Q6IQ49-2 170 180 SDE2 Protein SDE2 homolog yes no 3 0.0008581 90.827 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 15568000 1129800 1275900 1816700 1001800 3080600 7263400 5335 249 5418 23839;23840;23841;23842;23843;23844 15801;15802;15803;15804;15805 15802 4 MVTETEETQEK SKEHMESRMVTETEET ETEETQEKKAESKEPI R M V E K K 0 0 0 0 0 1 4 0 0 0 0 1 1 0 0 0 3 0 0 1 0 11 0 1323.5864 Q6IQ49-2;C9JIQ2;Q6IQ49;Q6IQ49-3 Q6IQ49-2 300 310 SDE2 Protein SDE2 homolog yes no 2 1.5856E-29 125.23 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 13065000 1087300 2596300 4489100 1084100 1519700 2288700 5336 249 5419 23845;23846;23847;23848;23849;23850 15806;15807;15808;15809;15810 15806 5 MWDPHNDPNAQGDAFK QEVETELKMWDPHNDP NAQGDAFKTLFVARVN K M W F K T 2 0 2 3 0 1 0 1 1 0 0 1 1 1 2 0 0 1 0 0 0 16 0 1841.7791 P08621-3;P08621-2;P08621 P08621-3 88 103 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa yes no 3 0.0033742 52.009 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3031000 0 722810 0 0 347280 1961000 5337 807 5420 23851;23852;23853 15811 15811 1 MYDLQYQGGHK HPYQPDPKMYDLQYQG LQYQGGHKEAPSPTCP K M Y H K E 0 0 0 1 0 2 0 2 1 0 1 1 1 0 0 0 0 0 2 0 0 11 0 1338.6027 O00257 O00257 168 178 CBX4 E3 SUMO-protein ligase CBX4 yes yes 3 0.0032222 80.102 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 11109000 613240 766350 1182100 1043600 2444100 5059200 5338 687 5421 23854;23855;23856;23857;23858;23859 15812 15812 1 MYEEHLKR ECMEGVCKMYEEHLKR MYEEHLKRMNPNSPSI K M Y K R M 0 1 0 0 0 0 2 0 1 0 1 1 1 0 0 0 0 0 1 0 0 8 1 1104.5386 G3V279;P84090 G3V279 35 42 ERH Enhancer of rudimentary homolog yes no 2 0.031673 95.815 By matching By matching By MS/MS By matching By matching By matching 1 1 1037400 0 334520 702930 0 0 0 5339 581 5422 23860;23861 15813 15813 1 MYGRNELIAR IILSDEGKMYGRNELI GRNELIARYIKLRTGK K M Y A R Y 1 2 1 0 0 0 1 1 0 1 1 0 1 0 0 0 0 0 1 0 0 10 1 1221.6288 H0Y3A6;H0YGS2;H0Y308;Q15561;Q15562;A4FUP2;H0YEJ9;P28347;H0YE88;Q99594 A4FUP2 82 91 TEAD4;TEAD2;TEAD1;TEAD3 Transcriptional enhancer factor TEF-3;Transcriptional enhancer factor TEF-4;Transcriptional enhancer factor TEF-1;Transcriptional enhancer factor TEF-5 no no 3 0.0031705 91.867 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 58047000 0 4024500 4446900 6183100 13776000 29616000 5340 606;12;1429 5423 23862;23863;23864;23865;23866 15814;15815;15816;15817;15818;15819 15814 6 MYLCLSQER FYLKDTERMYLCLSQE YLCLSQERIIQFQATP R M Y E R I 0 1 0 0 1 1 1 0 0 0 2 0 1 0 0 1 0 0 1 0 0 9 0 1198.5475 Q06330;D6R927;Q06330-5;Q06330-4;Q06330-6;Q06330-7;Q06330-3;Q06330-2;H0Y8R3 Q06330 296 304 RBPJ Recombining binding protein suppressor of hairless yes no 2 0.0064563 91.867 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 6149800 0 2331700 0 0 0 3818100 5341 1042 5424 23867;23868 15820;15821 15820 2 MYLSNNPNSHTDNNAK EALKAMDKMYLSNNPN SHTDNNAKSSDKEEKH K M Y A K S 1 0 5 1 0 0 0 0 1 0 1 1 1 0 1 2 1 0 1 0 0 16 0 1818.7955 P05549-5;Q5TAV5;P05549 P05549-5 406 421 TFAP2A Transcription factor AP-2-alpha yes no 3 0.00023992 76.156 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 21906000 2698000 2964800 3679900 3539400 4845600 4177800 5342 797 5425 23869;23870;23871;23872;23873;23874 15822;15823;15824;15825;15826;15827 15823 6 MYSNVYYHITSK HKCFFTSKMYSNVYYH VYYHITSKHASPDKWN K M Y S K H 0 0 1 0 0 0 0 0 1 1 0 1 1 0 0 2 1 0 3 1 0 12 0 1504.7021 Q96JM3 Q96JM3 73 84 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.031118 45.28 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 12804000 2252100 941340 1640900 2008500 1637000 4324200 5343 1399 5426 23875;23876;23877;23878;23879;23880 15828 15828 1 MYSYPARVPPPPPIAR FQRDYYDRMYSYPARV PPPPPIARAVVPSKRQ R M Y A R A 2 2 0 0 0 0 0 0 0 1 0 0 1 0 6 1 0 0 2 1 0 16 1 1810.9552 G3V576;G3V4W0;B4DY08;G3V4C1;P07910-2;B2R603;G3V2Q1;P07910;P07910-3;G3V555;G3V5V7;G3V575;G8JL89;G3V2D6;P07910-4 G3V576 136 151 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 3 1.8351E-37 115.12 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 40277000 8381200 14964000 0 0 2764700 14167000 5344 68 5427 23881;23882;23883;23884 15829;15830;15831;15832 15831 3 NAADPISGDFK EHAGRNGRNAADPISG DPISGDFKEISSVKLV R N A F K E 2 0 1 2 0 0 0 1 0 1 0 1 0 1 1 1 0 0 0 0 0 11 0 1133.5353 P46013;F5H4V4 P46013 194 204 MKI67 Antigen KI-67 yes no 2 0.013873 60.301 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 11023000 0 4321700 1159600 0 1060200 4481500 5345 919 5428 23885;23886;23887;23888 15833 15833 1 NAALAPTSWHQRGQNPGK NEKDSNDKNAALAPTS QRGQNPGKSYRLKHGL K N A G K S 3 1 2 0 0 2 0 2 1 0 1 1 0 0 2 1 1 1 0 0 0 18 1 1931.9714 O75128-6;H7C1N2;O75128-3;O75128;O75128-7;O75128-2;E7EQN2 O75128-6 222 239 COBL Protein cordon-bleu yes no 3 0.005806 46.156 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2343100 0 617740 0 0 0 1725300 5346 668 5429 23889;23890 15834;15835 15834 2 NAAQFLLSTNDK KIRWLPQKNAAQFLLS FLLSTNDKTIKLWKIS K N A D K T 2 0 2 1 0 1 0 0 0 0 2 1 0 1 0 1 1 0 0 0 0 12 0 1320.6674 P63151;P63151-2 P63151 106 117 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform yes no 2 7.8004E-66 142.83 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 51658000 16574000 6839300 0 28245000 0 0 5347 1003 5430 23891;23892;23893 15836;15837;15838 15838 3 NAAQFLLSTNDKTIK KIRWLPQKNAAQFLLS STNDKTIKLWKISERD K N A I K L 2 0 2 1 0 1 0 0 0 1 2 2 0 1 0 1 2 0 0 0 0 15 1 1662.8941 P63151;P63151-2 P63151 106 120 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform yes no 2 0 216.15 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 94422000 23239000 55392000 0 15791000 0 0 5348 1003 5431 23894;23895;23896 15839;15840;15841;15842 15840 4 NAAVCPYCSLR GSHERLCRNAAVCPYC VCPYCSLRFFSPELKQ R N A L R F 2 1 1 0 2 0 0 0 0 0 1 0 0 0 1 1 0 0 1 1 0 11 0 1309.5907 Q9ULJ3-2;Q9ULJ3 Q9ULJ3-2 545 555 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes no 2 0.014934 59.198 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4618300 494960 706530 633970 0 0 2782800 5349 1607 5432 23897;23898;23899;23900 15843;15844 15843 2 NADDSTKKPNAETTVASEIK KNSHHIHKNADDSTKK TTVASEIKETNDTWNS K N A I K E 3 0 2 2 0 0 2 0 0 1 0 3 0 0 1 2 3 0 0 1 0 20 2 2118.0441 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 186 205 WAPAL Wings apart-like protein homolog yes no 3;4 0.002436 55.907 By MS/MS By MS/MS By matching By matching By matching By MS/MS 3 2 2 2 2 13909000 1909800 4330000 1754300 0 3059400 2855300 5350 1253 5433 23901;23902;23903;23904;23905;23906;23907;23908;23909;23910;23911 15845;15846;15847;15848 15848 3 NADLCIASGTK SKKKQSLKNADLCIAS LCIASGTKVALFNRLR K N A T K V 2 0 1 1 1 0 0 1 0 1 1 1 0 0 0 1 1 0 0 0 0 11 0 1148.5496 Q06330;D6R927;Q06330-5;Q06330-4;Q06330-6;Q06330-7;Q06330-3;Q06330-2;D6RBQ8;D6RA45;D6RCM1 Q06330 176 186 RBPJ Recombining binding protein suppressor of hairless yes no 2 2.1348E-05 104.24 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 11778000 0 2489900 1937800 1285700 1669300 4395300 5351 1042 5434 23912;23913;23914;23915;23916 15849;15850;15851;15852;15853 15852 5 NADMSEEMQQDSVECATQALEK CDRKAVIKNADMSEEM CATQALEKYNIEKDIA K N A E K Y 3 0 1 2 1 3 4 0 0 0 1 1 2 0 0 2 1 0 0 1 0 22 0 2513.0356 P63167;F8VXI7;F8VXL2;F8VRV5 P63167 10 31 DYNLL1 Dynein light chain 1, cytoplasmic yes no 3 0.011356 37.688 By matching By MS/MS By matching By matching By matching By matching 1 13638000 0 13638000 0 0 0 0 5352 1004 5435 23917 15854 15854 1 NAEFLTCNIPTSNASNNMVTTEK AAIPETKRNAEFLTCN NNMVTTEKVENGQEPV R N A E K V 2 0 5 0 1 0 2 0 0 1 1 1 1 1 1 2 4 0 0 1 0 23 0 2555.1632 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 386 408 ADAR Double-stranded RNA-specific adenosine deaminase no no 2;3 4.2861E-68 114.19 By matching By MS/MS By matching By MS/MS By matching By MS/MS 2 1 1 55833000 0 23928000 0 5181500 0 26724000 5353 352;968 5436 23918;23919;23920;23921 15855;15856;15857;15858 15856 4 NAEGEPVCNACGLYMK TTTTLWRRNAEGEPVC NACGLYMKLHGVPRPL R N A M K L 2 0 2 0 2 0 2 2 0 0 1 1 1 0 1 0 0 0 1 1 0 16 0 1811.7641 Q92908-2;Q92908 Q92908-2 312 327 GATA6 Transcription factor GATA-6 no no 2 1.5403E-37 115.68 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 21104000 7477900 1353000 5629700 1288300 1010500 4344400 5354 1363 5437 23922;23923;23924;23925;23926;23927 15859;15860;15861 15859 3 NAEPDEQDFEK KKLVPVERNAEPDEQD PDEQDFEKSNSRKRPR R N A E K S 1 0 1 2 0 1 3 0 0 0 0 1 0 1 1 0 0 0 0 0 0 11 0 1320.547 Q14241 Q14241 107 117 TCEB3 Transcription elongation factor B polypeptide 3 yes yes 2 0.0064311 70.089 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2251300 0 0 0 175420 680660 1395200 5355 1103 5438 23928;23929;23930 15862 15862 1 NAGETLLQR ARRLIVNKNAGETLLQ AGETLLQRAARLGYEE K N A Q R A 1 1 1 0 0 1 1 1 0 0 2 0 0 0 0 0 1 0 0 0 0 9 0 1000.5302 Q5H9F3-3;Q6W2J9;Q6W2J9-4;Q6W2J9-2;A6NE70;H7C2V9;H7C231;H7BZ37 Q6W2J9 1461 1469 BCORL1;BCOR BCL-6 corepressor-like protein 1;BCL-6 corepressor no no 2 0.018028 70.908 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4506700 466960 574980 612080 0 0 2852700 5356 1237;1182 5439 23931;23932;23933;23934 15863;15864 15864 2 NAGVEGSLIVEK IPAMTIAKNAGVEGSL EGSLIVEKIMQSSSEV K N A E K I 1 0 1 0 0 0 2 2 0 1 1 1 0 0 0 1 0 0 0 2 0 12 0 1214.6507 P10809 P10809 482 493 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 0.034044 46.282 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 8900000 1606000 1539600 1842100 862350 0 3050100 5357 820 5440 23935;23936;23937;23938;23939 15865 15865 1 NAHSATTWSGQYVGGAEAR VAWKNNYRNAHSATTW YVGGAEARINTQWLLT R N A A R I 4 1 1 0 0 1 1 3 1 0 0 0 0 0 0 2 2 1 1 1 0 19 0 1961.898 CON__Streptavidin CON__Streptavidin 86 104 yes yes 3 0.0011215 56.081 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 14346000 3325000 3025100 2219000 1564800 2184000 2027800 + 5358 311 5441 23940;23941;23942;23943;23944;23945 15866;15867;15868;15869;15870;15871 15871 6 NAIANASTLAEVER PGDVEAIKNAIANAST STLAEVERLKGLLQSG K N A E R L 4 1 2 0 0 0 2 0 0 1 1 0 0 0 0 1 1 0 0 1 0 14 0 1457.7474 P09661;H0YLR3;H0YMA0 P09661 206 219 SNRPA1 U2 small nuclear ribonucleoprotein A yes no 2 6.4572E-70 135.14 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 61350000 21399000 0 0 0 0 39951000 5359 814 5442 23946;23947 15872;15873 15873 2 NAIKVNNVNGNQVGHLK DPNNPYDKNAIKVNNV GNQVGHLKKELAGALA K N A L K K 1 0 5 0 0 1 0 2 1 1 1 2 0 0 0 0 0 0 0 3 0 17 1 1817.986 Q14527;E7ESN4;F5H3D6 Q14527 96 112 HLTF Helicase-like transcription factor yes no 3;4 1.6949E-44 114.21 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 2 2 1 2 23167000 340590 7473000 5649900 1563900 402040 7737300 5360 1107 5443 23948;23949;23950;23951;23952;23953;23954;23955;23956;23957 15874;15875;15876;15877;15878;15879 15875 6 NANGDPVCNACGLYYK TTTTLWRRNANGDPVC NACGLYYKLHNVNRPL R N A Y K L 2 0 3 1 2 0 0 2 0 0 1 1 0 0 1 0 0 0 2 1 0 16 0 1814.7716 P23769;P23769-2;P23771;P23771-2 P23769 363 378 GATA2;GATA3 Endothelial transcription factor GATA-2;Trans-acting T-cell-specific transcription factor GATA-3 yes no 2 8.3578E-80 134.37 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 2 27617000 5224100 3229200 7530700 1683400 0 9949200 5361 869 5444 23958;23959;23960;23961;23962;23963 15880;15881;15882;15883;15884;15885 15882 6 NANGGYVCNACGLYQK TKTSLWRKNANGGYVC NACGLYQKLHSTPRPL K N A Q K L 2 0 3 0 2 1 0 3 0 0 1 1 0 0 0 0 0 0 2 1 0 16 0 1787.7719 Q9UHF7;Q9UHF7-3;Q9UHF7-2;E5RFF3;H0YAV4 Q9UHF7 910 925 TRPS1 Zinc finger transcription factor Trps1 yes no 2 0.0054532 49.188 By matching By matching By MS/MS By matching By matching By matching 1 1 2802500 0 0 1161900 0 0 1640600 5362 1594 5445 23964;23965 15886 15886 1 NANTFISPQQR LNPFINRRNANTFISP TFISPQQRWRAKVQER R N A Q R W 1 1 2 0 0 2 0 0 0 1 0 0 0 1 1 1 1 0 0 0 0 11 0 1274.6367 P08493 P08493 39 49 MGP Matrix Gla protein yes yes 2 2.9998E-05 103.08 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 9455800 0 1880700 309320 0 0 7265800 5363 806 5446 23966;23967;23968 15887;15888 15888 2 NAPQISDGSEVVVVK KRMPRVKKNAPQISDG GSEVVVVKEELNSSVA K N A V K E 1 0 1 1 0 1 1 1 0 1 0 1 0 0 1 2 0 0 0 4 0 15 0 1540.8097 Q8N5C6 Q8N5C6 70 84 SRBD1 S1 RNA-binding domain-containing protein 1 yes yes 2 1.3521E-86 138.28 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 112230000 38311000 13582000 35836000 4987200 4166900 15351000 5364 1302 5447 23969;23970;23971;23972;23973;23974 15889;15890;15891;15892;15893 15893 5 NAPYFPCDK KPAAPSARNAPYFPCD APYFPCDKASKEEERP R N A D K A 1 0 1 1 1 0 0 0 0 0 0 1 0 1 2 0 0 0 1 0 0 9 0 1110.4804 P41182-2;P41182 P41182-2 290 298 BCL6 B-cell lymphoma 6 protein yes no 2 0.032422 63.426 By matching By matching By matching By matching By MS/MS By matching 1 2447800 0 0 0 0 2447800 0 5365 911 5448 23975 15894 15894 1 NAQAHRSADEANVLREK FISHFLLKNAQAHRSA EANVLREKADLATKCL K N A E K A 4 2 2 1 0 1 2 0 1 0 1 1 0 0 0 1 0 0 0 1 0 17 2 1907.9562 Q5C9Z4 Q5C9Z4 828 844 NOM1 Nucleolar MIF4G domain-containing protein 1 yes yes 4 0.034811 35.832 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2560200 0 0 594630 0 757050 1208500 5366 1178 5449 23976;23977;23978 15895 15895 1 NAQGIINPIEAK ________________ IINPIEAKQRKGKGAV K N A A K Q 2 0 2 0 0 1 1 1 0 3 0 1 0 0 1 0 0 0 0 0 0 12 0 1266.6932 H0Y4U8;Q9UBB9 H0Y4U8 8 19 TFIP11 Tuftelin-interacting protein 11 yes no 2 0.0037585 67.997 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 2049500 0 0 0 451370 0 1598200 5367 611 5450 23979;23980 15896;15897 15897 2 NASEDNHSENTLYSNDNGSNLQREATVISEQK VAEVESSKNASEDNHS ATVISEQKVKETKILA K N A Q K V 2 1 6 2 0 2 4 1 1 1 2 1 0 0 0 5 2 0 1 1 0 32 1 3563.5997 Q8NEF9 Q8NEF9 138 169 SRFBP1 Serum response factor-binding protein 1 yes yes 4 0.018058 25.265 By matching By MS/MS By matching By matching By matching By matching 1 2907900 0 2907900 0 0 0 0 5368 1322 5451 23981 15898 15898 1 NASMNTQHGTATEVAVETTTPK SKKANLGKNASMNTQH AVETTTPKQGQNLWFL K N A P K Q 3 0 2 0 0 1 2 1 1 0 0 1 1 0 1 1 6 0 0 2 0 22 0 2287.075 Q9UIG0-2;Q9UIG0 Q9UIG0-2 960 981 BAZ1B Tyrosine-protein kinase BAZ1B yes no 3 0.022206 33.79 By MS/MS By matching By matching By matching By matching By matching 1 1 1 3050500 884780 292710 0 0 1873000 0 5369 1596 5452 23982;23983;23984 15899 15899 1 NASPEDVEYYNCQQELTDDLHK QETKRWLKNASPEDVE ELTDDLHKQYQIVERI K N A H K Q 1 0 2 3 1 2 3 0 1 0 2 1 0 0 1 1 1 0 2 1 0 22 0 2667.1395 O14646-2;O14646 O14646-2 365 386 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes no 3 0.0035474 45.992 By matching By MS/MS By matching By matching By matching By matching 1 4612400 0 4612400 0 0 0 0 5370 695 5453 23985 15900 15900 1 NASTVVVSDKYNLKPIPLK PSLVPVKKNASTVVVS NLKPIPLKRQSNVAAP K N A L K R 1 0 2 1 0 0 0 0 0 1 2 3 0 0 2 2 1 0 1 3 0 19 2 2085.1834 Q96QC0;F5H5K4 Q96QC0 226 244 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes no 3 1.769E-144 144.97 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 57091000 16858000 10569000 0 16015000 3578100 10070000 5371 1414 5454 23986;23987;23988;23989;23990 15901;15902;15903;15904 15901 4 NAVALSASPQLK LALANSSRNAVALSAS LSASPQLKEAQSEKEE R N A L K E 3 0 1 0 0 1 0 0 0 0 2 1 0 0 1 2 0 0 0 1 0 12 0 1197.6717 Q92547 Q92547 881 892 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 2 0.0028937 72.731 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 12891000 0 2626000 1757200 617240 1766000 6124800 5372 1351 5455 23991;23992;23993;23994;23995 15905;15906 15905 2 NAVIRDLGK DDNIRETKNAVIRDLG AVIRDLGKKITFSDVR K N A G K K 1 1 1 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 0 1 0 9 1 984.57163 Q86TC9-2;F5H7I9;Q86TC9;F5GWA6 Q86TC9-2 606 614 MYPN Myopalladin yes no 2 0.031064 82.261 By matching By matching By matching By matching By matching By MS/MS 1 1 1488300 0 0 0 463030 0 1025300 5373 481 5456 23996;23997 15907 15907 1 NAVPITPTLNR NPWDQVKRNAVPITPT PITPTLNREQLSTSEE R N A N R E 1 1 2 0 0 0 0 0 0 1 1 0 0 0 2 0 2 0 0 1 0 11 0 1194.6721 CON__P02663 CON__P02663 115 125 yes yes 2 0.0041726 78.342 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 101550000 16579000 12510000 21145000 16265000 16342000 18706000 + 5374 289 5457 23998;23999;24000;24001;24002;24003 15908;15909;15910;15911 15909 4 NCAILIENDQSISR VEYVVGRKNCAILIEN ENDQSISRNHAVLTAN K N C S R N 1 1 2 1 1 1 1 0 0 3 1 0 0 0 0 2 0 0 0 0 0 14 0 1631.7937 O60934;F5H3R2;E5RGU1;E2QRP0 O60934 30 43 NBN Nibrin yes no 2 0.026729 57.267 By matching By matching By matching By matching By matching By MS/MS 1 619940 0 0 0 0 0 619940 5375 736 5458 24004 15912 15912 0 NCEPMIGLVPILK TIFHQALKNCEPMIGL IGLVPILKGGRFYQVP K N C L K G 0 0 1 0 1 0 1 1 0 2 2 1 1 0 2 0 0 0 0 1 0 13 0 1482.7938 Q9Y2R9 Q9Y2R9 151 163 MRPS7 28S ribosomal protein S7, mitochondrial yes yes 3 0.027284 48.115 By matching By MS/MS By matching By matching By matching By matching 1 1 5428600 0 1645100 0 0 0 3783500 5376 1636 5459 24005;24006 15913 15913 182 0 NCFALLTTPEMKTSDTQIK EDKISALKNCFALLTT KTSDTQIKEKIFPQEE K N C I K E 1 0 1 1 1 1 1 0 0 1 2 2 1 1 1 1 4 0 0 0 0 19 1 2197.0759 Q5THJ4-2;Q5THJ4 Q5THJ4-2 896 914 VPS13D Vacuolar protein sorting-associated protein 13D yes no 2 0.0031908 58.246 By matching By matching By MS/MS By matching By matching By matching 1 17675000 0 0 17675000 0 0 0 5377 1200 5460 24007 15914 15914 1 NCLTNFHGMDLTRDK ITEDVQGKNCLTNFHG GMDLTRDKMCSMVKKW K N C D K M 0 1 2 2 1 0 0 1 1 0 2 1 1 1 0 0 2 0 0 0 0 15 1 1820.8298 D6RAT0;P61247;D6RG13;D6RB09;F5H4F9;E9PFI5;D6RED7;D6RAS7;H0Y8L7 D6RAT0 58 72 RPS3A 40S ribosomal protein S3a yes no 4 0.0088164 48.405 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 8132400 0 0 0 0 6277200 1855200 5378 321 5461 24008;24009 15915;15916 15916 2 NCPTNGDKNFESGPR GKPGHYIKNCPTNGDK KNFESGPRIKKSTGIP K N C P R I 0 1 3 1 1 0 1 2 0 0 0 1 0 1 2 1 1 0 0 0 0 15 1 1691.7322 Q7Z6E9;Q7Z6E9-2;Q7Z6E9-4;H3BSK8;H3BUN0 Q7Z6E9 173 187 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 3 0.0029804 58.079 By MS/MS By matching By matching By matching By matching By matching 1 1045200 1045200 0 0 0 0 0 5379 1255 5462 24010 15917;15918 15918 2 NCQHANAERPTVAR PRGILKMKNCQHANAE AERPTVARISSVQFHP K N C A R I 3 2 2 0 1 1 1 0 1 0 0 0 0 0 1 0 1 0 0 1 0 14 1 1622.7696 Q9Y5J1;B2RAX6 Q9Y5J1 240 253 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes no 3 0.0079079 52.79 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1636700 256910 673740 706040 0 0 0 5380 1654 5463 24011;24012;24013 15919;15920 15920 2 NCTAGAVYTYHEK ________________ AVYTYHEKKKDTAASG K N C E K K 2 0 1 0 1 0 1 1 1 0 0 1 0 0 0 0 2 0 2 1 0 13 0 1512.6667 Q9Y314 Q9Y314 7 19 NOSIP Nitric oxide synthase-interacting protein yes yes 2;3 0.0031029 63.185 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 2 2 1 1 2 9077700 947050 1422000 1538200 791750 1380700 2998000 5381 1642 5464 24014;24015;24016;24017;24018;24019;24020;24021;24022 15921;15922;15923;15924 15921 4 NCTYTQVQTR TCGKCKKKNCTYTQVQ TYTQVQTRSADEPMTT K N C T R S 0 1 1 0 1 2 0 0 0 0 0 0 0 0 0 0 3 0 1 1 0 10 0 1269.5772 P23193-2;P23193 P23193-2 249 258 TCEA1 Transcription elongation factor A protein 1 no no 2 0.01406 68.786 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3064100 579300 775130 0 266810 0 1442800 5382 864 5465 24023;24024;24025;24026 15925 15925 1 NCVVELNFGQK LLPHVLCKNCVVELNF VELNFGQKEEPFFPPP K N C Q K E 0 0 2 0 1 1 1 1 0 0 1 1 0 1 0 0 0 0 0 2 0 11 0 1306.634 H3BQZ7;Q1KMD3 H3BQZ7 407 417 hCG_2044799;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 2 0.0049662 108.31 By matching By MS/MS By matching By matching By matching By matching 1 1 13830000 0 9937900 0 3892000 0 0 5383 640 5466 24027;24028 15926 15926 0 NDFTEEEEAQVR IRKTFNIKNDFTEEEE EEEEAQVRKENQWCEE K N D V R K 1 1 1 1 0 1 4 0 0 0 0 0 0 1 0 0 1 0 0 1 0 12 0 1465.6321 P63208;E5RJR5 P63208 143 154 SKP1 S-phase kinase-associated protein 1 yes no 2 6.5671E-10 107.09 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 5384 344 5467 24029 15927 15927 1 NDIHEDNLLECPPEELAR HAKCPLCRNDIHEDNL CPPEELARDSEKKSDM R N D A R D 1 1 2 2 1 0 4 0 1 1 3 0 0 0 2 0 0 0 0 0 0 18 0 2162.9902 Q14527;Q14527-2;H7C5K0 Q14527 802 819 HLTF Helicase-like transcription factor yes no 3 0.0012701 59.372 By matching By MS/MS By matching By matching By matching By matching 1 18157000 0 18157000 0 0 0 0 5385 1107 5468 24030 15928 15928 1 NDILEEPVDSDSTK PLGLDKRKNDILEEPV PVDSDSTKTLTKQQST K N D T K T 0 0 1 3 0 0 2 0 0 1 1 1 0 0 1 2 1 0 0 1 0 14 0 1560.7155 Q9H582-2;Q9H582;F5GWV4 Q9H582-2 628 641 ZNF644 Zinc finger protein 644 yes no 2 0.027809 52.599 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2176800 785130 570710 0 0 0 820980 5386 1492 5469 24031;24032;24033 15929 15929 0 NDILEEPVDSDSTKTLTK PLGLDKRKNDILEEPV DSTKTLTKQQSTTFPK K N D T K Q 0 0 1 3 0 0 2 0 0 1 2 2 0 0 1 2 3 0 0 1 0 18 1 2003.9899 Q9H582-2;Q9H582;F5GWV4 Q9H582-2 628 645 ZNF644 Zinc finger protein 644 yes no 3 4.0579E-91 133.52 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 47582000 28945000 0 11854000 0 1384800 5397400 5387 1492 5470 24034;24035;24036;24037 15930;15931;15932;15933 15933 4 NDLAVVDVR GISDVFAKNDLAVVDV DLAVVDVRIGMTRKFG K N D V R I 1 1 1 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 3 0 9 0 999.53491 E7EX81;P19338 E7EX81 226 234 NCL Nucleolin yes no 2 0.034186 62.633 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 5546300 1196400 1249000 0 415070 796070 1889700 5388 397 5471 24038;24039;24040;24041;24042 15934 15934 1 NDLEMGIK PHSKQGNKNDLEMGIK NDLEMGIKAARPEIAD K N D I K A 0 0 1 1 0 0 1 1 0 1 1 1 1 0 0 0 0 0 0 0 0 8 0 918.44807 Q96GM8;B4DEM6 Q96GM8 401 408 TOE1 Target of EGR1 protein 1 yes no 1;2 0.0043421 101.43 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2 2 35040000 951480 5005800 3058000 974190 7172700 17878000 5389 1389 5472 24043;24044;24045;24046;24047;24048;24049;24050 15935;15936;15937;15938;15939 15939 5 NDLQDTEISPR EAWEASHKNDLQDTEI QDTEISPRQNRRTRAA K N D P R Q 0 1 1 2 0 1 1 0 0 1 1 0 0 0 1 1 1 0 0 0 0 11 0 1286.6103 Q9NS91 Q9NS91 463 473 RAD18 E3 ubiquitin-protein ligase RAD18 yes yes 2 0.024776 62.088 By matching By matching By matching By matching By matching By MS/MS 1 396520 0 0 0 0 0 396520 5390 1542 5473 24051 15940 15940 0 NDMDEPPSGDFGGDEEK MFRNYQRKNDMDEPPS DFGGDEEKSRKRKNKD K N D E K S 0 0 1 4 0 0 3 3 0 0 0 1 1 1 2 1 0 0 0 0 0 17 0 1837.6949 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 552 568 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 0.0011611 61.524 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 9611900 0 1641800 1616100 0 0 6354000 5391 486 5474 24052;24053;24054 15941;15942 15942 1 NDPEITINVPQSSK KSVSFSLKNDPEITIN INVPQSSKGHSASDKV K N D S K G 0 0 2 1 0 1 1 0 0 2 0 1 0 0 2 2 1 0 0 1 0 14 0 1540.7733 Q13416 Q13416 127 140 ORC2 Origin recognition complex subunit 2 yes yes 2 0.00021047 88.768 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 12524000 2972600 0 5395400 682350 0 3473200 5392 1081 5475 24055;24056;24057;24058 15943;15944;15945 15945 2 NDPFVVDCSDK LPVKIVQKNDPFVVDC FVVDCSDKLGRVQEFD K N D D K L 0 0 1 3 1 0 0 0 0 0 0 1 0 1 1 1 0 0 0 2 0 11 0 1294.55 O14497-2;O14497;Q96SM7;H0Y488;O14497-3 O14497-2 1603 1613 ARID1A AT-rich interactive domain-containing protein 1A yes no 2 0.0069874 69.261 By matching By matching By MS/MS By matching By matching By matching 1 1 1 5211900 2178200 0 1779100 1254600 0 0 5393 694 5476 24059;24060;24061 15946 15946 1 NDQCYDDIRVSR HVFGQAVKNDQCYDDI YDDIRVSRVTWDSSFC K N D S R V 0 2 1 3 1 1 0 0 0 1 0 0 0 0 0 1 0 0 1 1 0 12 1 1539.6736 Q9ULV4;A7MAP0;F8W1H8;F8VUX3;F8VSA4;F8VRE9;F8VTT6;F8VVB7 Q9ULV4 20 31 CORO1C Coronin-1C;Coronin yes no 3 0.024679 50.108 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4856900 0 951330 1393000 0 268880 2243700 5394 33 5477 24062;24063;24064;24065 15947 15947 1 NDQDTWDYTNPNLSGQGDPGSNPNK PTRLNVFKNDQDTWDY DPGSNPNKRQRQPPLL K N D N K R 0 0 5 4 0 2 0 3 0 0 1 1 0 0 3 2 2 1 1 0 0 25 0 2733.1539 P14866;A6NIT8 P14866 278 302 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 2;3 2.6848E-51 104.7 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 103170000 26116000 0 39363000 0 6737100 30958000 5395 838 5478 24066;24067;24068;24069;24070;24071;24072;24073 15948;15949;15950;15951;15952;15953;15954;15955;15956;15957 15956 9 NDQDTWDYTNPNLSGQGDPGSNPNKR PTRLNVFKNDQDTWDY PGSNPNKRQRQPPLLG K N D K R Q 0 1 5 4 0 2 0 3 0 0 1 1 0 0 3 2 2 1 1 0 0 26 1 2889.255 P14866;A6NIT8 P14866 278 303 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 3 2.2533E-21 85.062 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 10176000 4405100 2521000 3250000 0 0 0 5396 838 5479 24074;24075;24076 15958;15959;15960;15961;15962 15961 5 NEAFSSEDSLGENKTISPK SKEHKVDKNEAFSSED ENKTISPKSTVYPIFS K N E P K S 1 0 2 1 0 0 3 1 0 1 1 2 0 1 1 4 1 0 0 0 0 19 1 2051.9647 Q56NI9;H0YB88 Q56NI9 304 322 ESCO2 N-acetyltransferase ESCO2 yes no 3 0.0010305 60.764 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 9960400 0 0 2707300 3073200 1447300 2732700 5397 1176 5480 24077;24078;24079;24080 15963 15963 1 NECISEDMGDEDK QGEQASEKNECISEDM EDMGDEDKEERQESRA K N E D K E 0 0 1 3 1 0 3 1 0 1 0 1 1 0 0 1 0 0 0 0 0 13 0 1540.5658 Q96RL1;F8VQY2;Q96RL1-3;F2Z2T8 Q96RL1 346 358 UIMC1 BRCA1-A complex subunit RAP80 yes no 2 1.081E-59 131.32 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 17932000 4263600 2190100 3353100 1737400 1852800 4534800 5398 535 5481 24081;24082;24083;24084;24085;24086;24087 15964;15965;15966;15967;15968;15969;15970 15965 7 NECISEDMGDEDKEER QGEQASEKNECISEDM GDEDKEERQESRASDW K N E E R Q 0 1 1 3 1 0 5 1 0 1 0 1 1 0 0 1 0 0 0 0 0 16 1 1954.752 Q96RL1;F8VQY2;Q96RL1-3;F2Z2T8 Q96RL1 346 361 UIMC1 BRCA1-A complex subunit RAP80 yes no 3 0.0095787 45.722 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1463500 0 0 464880 444650 0 554010 5399 535 5482 24088;24089;24090 15971 15971 1 NEDLLEVGSRPGPASQLPR KVHRGVSRNEDLLEVG GPASQLPRFVRVNTLK R N E P R F 1 2 1 1 0 1 2 2 0 0 3 0 0 0 3 2 0 0 0 1 0 19 1 2034.0494 C9JJU9;Q96P11-2;G3V0G9;Q96P11;Q96P11-4;Q96P11-3 C9JJU9 80 98 NSUN5 Putative methyltransferase NSUN5 yes no 3 0.00018031 81.713 By MS/MS By matching By matching By matching By matching By matching 1 5396100 5396100 0 0 0 0 0 5400 255 5483 24091 15972 15972 1 NEDLTDELSLNK RDIKNKFKNEDLTDEL TDELSLNKISADTTDN K N E N K I 0 0 2 2 0 0 2 0 0 0 3 1 0 0 0 1 1 0 0 0 0 12 0 1389.6624 P33981-2;P33981;D6RFY1;D6RF82;D6REX1;D6RIC6 P33981-2 29 40 TTK Dual specificity protein kinase TTK yes no 2 1.4239E-26 121.21 By matching By MS/MS By matching By matching By matching By matching 1 3225500 0 3225500 0 0 0 0 5401 891 5484 24092 15973 15973 1 NEDVCSCSTDTSEVPRWPENK WLQRYFNKNEDVCSCS VPRWPENKEDHLVYAD K N E N K E 0 1 2 2 2 0 3 0 0 0 0 1 0 0 2 3 2 1 0 2 0 21 1 2509.0486 P49790;F6QR24;Q4LE47 P49790 62 82 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 3 0.00039893 56.719 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4797100 1858200 986310 0 0 0 1952600 5402 531 5485 24093;24094;24095 15974;15975 15975 2 NEEAADEVFK PPPRLVKKNEEAADEV EAADEVFKDIMESSPG K N E F K D 2 0 1 1 0 0 3 0 0 0 0 1 0 1 0 0 0 0 0 1 0 10 0 1150.5142 H7C1H8;P00519;P00519-2 H7C1H8 605 614 ABL1 Tyrosine-protein kinase ABL1 yes no 2 0.003334 89.171 By matching By MS/MS By matching By matching By matching By matching 1 1 1047900 299470 748410 0 0 0 0 5403 666 5486 24096;24097 15976 15976 1 NEEPSEEEIDAPKPK SKTKKVTKNEEPSEEE EIDAPKPKKMKKEKEM K N E P K K 1 0 1 1 0 0 5 0 0 1 0 2 0 0 3 1 0 0 0 0 0 15 1 1710.7948 Q9NR30;Q9NR30-2 Q9NR30 117 131 DDX21 Nucleolar RNA helicase 2 yes no 2;3 3.2194E-124 150.39 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 90952000 25175000 13808000 9688700 8491300 22567000 11222000 5404 1534 5487 24098;24099;24100;24101;24102;24103;24104;24105;24106;24107;24108;24109 15977;15978;15979;15980;15981;15982;15983;15984;15985 15983 9 NEESGAVVVPGTR FATFLQRKNEESGAVV AVVVPGTRSRFFCSSD K N E T R S 1 1 1 0 0 0 2 2 0 0 0 0 0 0 1 1 1 0 0 3 0 13 0 1313.6575 Q9UQ84-4;Q9UQ84 Q9UQ84-4 491 503 EXO1 Exonuclease 1 yes no 2 0.0022319 69.261 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 9892700 491570 1649500 1302300 494190 1384300 4570900 5405 1624 5488 24110;24111;24112;24113;24114;24115 15986;15987 15987 2 NEGVNWLR AENAIRKKNEGVNWLR NEGVNWLRMASRVDAV K N E L R M 0 1 2 0 0 0 1 1 0 0 1 0 0 0 0 0 0 1 0 1 0 8 0 986.49338 F8VUA2;Q9HD42;F8VVT7 F8VUA2 57 64 CHMP1A Charged multivesicular body protein 1a yes no 2 4.337E-05 116.37 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 54009000 2632200 5903500 9023600 0 2192100 34258000 5406 541 5489 24116;24117;24118;24119;24120;24121 15988;15989;15990;15991;15992;15993 15989 6 NELEIPGQYDGR DFKVEFLRNELEIPGQ IPGQYDGRGKPLPEYH R N E G R G 0 1 1 1 0 1 2 2 0 1 1 0 0 0 1 0 0 0 1 0 0 12 0 1389.6525 P78527;E7EUY0;P78527-2 P78527 3697 3708 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.029707 59.227 By matching By MS/MS By matching By matching By matching By matching 1 421790 0 421790 0 0 0 0 5407 1012 5490 24122 15994 15994 0 NELIEAFK WVEDQNKKNELIEAFK NELIEAFKQGMGKKAC K N E F K Q 1 0 1 0 0 0 2 0 0 1 1 1 0 1 0 0 0 0 0 0 0 8 0 962.5073 B4DPR4;C9J494;Q9H000 B4DPR4 269 276 MKRN2 Probable E3 ubiquitin-protein ligase makorin-2 yes no 2 0.01499 86.67 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 6358500 0 0 0 0 1906800 4451700 5408 114 5491 24123;24124 15995;15996 15995 2 NELLESEMKNLK DVTDAQIKNELLESEM ESEMKNLKKCVSELEE K N E L K K 0 0 2 0 0 0 3 0 0 0 3 2 1 0 0 1 0 0 0 0 0 12 1 1446.7388 Q14789;E7EP74 Q14789 1951 1962 GOLGB1 Golgin subfamily B member 1 yes no 2 0.022506 49.28 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3375900 941430 0 923040 0 0 1511500 5409 355 5492 24125;24126;24127 15997 15997 38 0 NELQEPCDSPKVK NIMLNIVKNELQEPCD PCDSPKVKEERIDTPP K N E V K E 0 0 1 1 1 1 2 0 0 0 1 2 0 0 2 1 0 0 0 1 0 13 1 1542.7348 O94913 O94913 1512 1524 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes yes 2;3 0.0019706 84.365 By matching By matching By matching By matching By MS/MS By matching 1 2 1 3101300 445950 0 0 0 2220200 435160 5410 758 5493 24128;24129;24130;24131 15998;15999 15998 2 NENSEVDTSAGSGSAPSVLHQR ISIDVERRNENSEVDT APSVLHQRNGQTEDVA R N E Q R N 2 1 2 1 0 1 2 2 1 0 1 0 0 0 1 5 1 0 0 2 0 22 0 2241.0258 Q8NFC6 Q8NFC6 1477 1498 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 3 0.00027905 56.882 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 5986800 831760 770650 502680 0 1201500 2680200 5411 1325 5494 24132;24133;24134;24135;24136 16000;16001 16000 2 NENSNDPELKKLK LLFFHFGKNENSNDPE DPELKKLKTLLKNDHI K N E L K T 0 0 3 1 0 0 2 0 0 0 2 3 0 0 1 1 0 0 0 0 0 13 2 1527.7893 Q8IXB1;Q8IXB1-2;F8W884 Q8IXB1 376 388 DNAJC10 DnaJ homolog subfamily C member 10 yes no 3 8.1107E-24 117.2 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 11716000 872670 1899800 2144400 1051700 1316200 4431200 5412 1287 5495 24137;24138;24139;24140;24141;24142 16002;16003;16004;16005 16003 4 NENTEGSPQEDGVELEGLKQR KKNKKKIKNENTEGSP ELEGLKQRLEKKQKRE K N E Q R L 0 1 2 1 0 2 5 3 0 0 2 1 0 0 1 1 1 0 0 1 0 21 1 2328.083 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5 P11388 1241 1261 TOP2A DNA topoisomerase 2-alpha yes no 3 4.1164E-19 92.39 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 2 1 21607000 2283900 4050300 3213600 1114300 2551600 8393000 5413 655 5496 24143;24144;24145;24146;24147;24148;24149 16006;16007;16008 16007 3 NENTEGSPQEDGVELEGLKQRLEK KKNKKKIKNENTEGSP GLKQRLEKKQKREPGT K N E E K K 0 1 2 1 0 2 6 3 0 0 3 2 0 0 1 1 1 0 0 1 0 24 2 2698.3046 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5 P11388 1241 1264 TOP2A DNA topoisomerase 2-alpha yes no 4 0.0027483 48.706 By matching By matching By matching By MS/MS By matching By matching 1 12162000 0 0 0 12162000 0 0 5414 655 5497 24150 16009 16009 1 NESLTEHPRSTELPK LEKSLEEKNESLTEHP PRSTELPKTHIEQIQK K N E P K T 0 1 1 0 0 0 3 0 1 0 2 1 0 0 2 2 2 0 0 0 0 15 1 1736.8693 Q99590-2;F8VXG7;Q99590;F8W028 Q99590-2 370 384 SCAF11 Protein SCAF11 yes no 3;4 6.6989E-05 88.706 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 2 1 148050000 11376000 19969000 27201000 18735000 39454000 31317000 5415 547 5498 24151;24152;24153;24154;24155;24156;24157;24158;24159;24160 16010;16011;16012;16013;16014;16015;16016;16017 16014 8 NESLTEHPRSTELPKTHIEQIQK LEKSLEEKNESLTEHP THIEQIQKHFSEDNNE K N E Q K H 0 1 1 0 0 2 4 0 2 2 2 2 0 0 2 2 3 0 0 0 0 23 2 2714.3988 Q99590-2;F8VXG7;Q99590;F8W028 Q99590-2 370 392 SCAF11 Protein SCAF11 yes no 5 0.0065535 54.047 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 27803000 7697500 2497100 8277800 7613500 0 1716800 5416 547 5499 24161;24162;24163;24164;24165 16018 16018 1 NETYNSHPLLVK YRLYGQWKNETYNSHP NSHPLLVKVKAQTIDR K N E V K V 0 0 2 0 0 0 1 0 1 0 2 1 0 0 1 1 1 0 1 1 0 12 0 1413.7252 Q8NI27 Q8NI27 529 540 THOC2 THO complex subunit 2 yes yes 2 0.0054132 63.966 By matching By matching By matching By matching By matching By MS/MS 1 1 1390400 0 0 0 0 336880 1053500 5417 1330 5500 24166;24167 16019 16019 1 NEVNGTSEDIK ESKESDTKNEVNGTSE NGTSEDIKSEGDTQSN K N E I K S 0 0 2 1 0 0 2 1 0 1 0 1 0 0 0 1 1 0 0 1 0 11 0 1204.5572 O95232;B4DJ96;H0YBV7;H0YAR4 O95232 414 424 LUC7L3 Luc7-like protein 3 yes no 2 0.0033399 83.137 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 2126900 156490 701680 581940 75649 0 611180 5418 766 5501 24168;24169;24170;24171;24172 16020;16021 16020 2 NEYSIPKHINPVAASLIQK ETYLRIKKNEYSIPKH VAASLIQKMLQTDPTA K N E Q K M 2 0 2 0 0 1 1 0 1 3 1 2 0 0 2 2 0 0 1 1 0 19 1 2121.1582 P53350;B4E083;I3L309;I3L2H5 P53350 266 284 PLK1 Serine/threonine-protein kinase PLK1 yes no 3 0.00027644 80.859 By matching By matching By MS/MS By matching By matching By matching 1 1 15463000 0 0 15125000 338090 0 0 5419 962 5502 24173;24174 16022 16022 1 NFAELAR KHAPKTCKNFAELARR KNFAELARRGYYNGTK K N F A R R 2 1 1 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 7 0 819.4239 Q9Y3C6 Q9Y3C6 38 44 PPIL1 Peptidyl-prolyl cis-trans isomerase-like 1 yes yes 2 0.040642 79.469 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 11440000 1439800 1777000 1714300 922310 1847700 3738900 5420 1646 5503 24175;24176;24177;24178;24179;24180 16023 16023 1 NFCGPSVTVDASAATK VDTIPETKNFCGPSVT VDASAATKSMNCLARK K N F T K S 3 0 1 1 1 0 0 1 0 0 0 1 0 1 1 2 2 0 0 2 0 16 0 1623.7563 Q96QE3 Q96QE3 1527 1542 ATAD5 ATPase family AAA domain-containing protein 5 yes yes 2 0.0029569 54.964 By matching By matching By matching By matching By matching By MS/MS 1 1 1958800 0 742330 0 0 0 1216500 5421 1415 5504 24181;24182 16024 16024 1 NFDDATMK KYSEKQERNFDDATMK NFDDATMKAGQCVIGL R N F M K A 1 0 1 2 0 0 0 0 0 0 0 1 1 1 0 0 1 0 0 0 0 8 0 940.39603 E7ENR3;B4DDF4;Q99439;B4DUT8;H3BTZ5;H3BVI6 E7ENR3 132 139 CNN2 Calponin-2 yes no 2 0.029084 71.692 By matching By matching By MS/MS By matching By matching By matching 1 832930 0 0 832930 0 0 0 5422 80 5505 24183 16025 16025 1 NFDQEGLVEHCK PCPYCPEKNFDQEGLV EGLVEHCKLFHSTDTK K N F C K L 0 0 1 1 1 1 2 1 1 0 1 1 0 1 0 0 0 0 0 1 0 12 0 1474.6511 Q9Y508-2;C9JU49;Q9Y508 Q9Y508-2 150 161 RNF114 RING finger protein 114 yes no 3 0.0017901 75.788 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 4310000 608380 1097800 0 768310 1835500 0 5423 269 5506 24184;24185;24186;24187 16026 16026 1 NFEALNAR YYKYILTRNFEALNAR NFEALNARGGGNQVSL R N F A R G 2 1 2 0 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 8 0 933.46683 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 967 974 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 0.0061452 107.29 By matching By matching By matching By matching By matching By MS/MS 1 1 1 11630000 0 790520 941800 0 0 9897600 5424 486 5507 24188;24189;24190 16027;16028 16028 2 NFEDVAFDEK PVKVLVGKNFEDVAFD EDVAFDEKKNVFVEFY K N F E K K 1 0 1 2 0 0 2 0 0 0 0 1 0 2 0 0 0 0 0 1 0 10 0 1212.5299 I3L2P8;F5H8J2;H7BZ94;E7EPA8;P07237;H0Y3Z3;B4DUA5 I3L2P8 318 327 P4HB Protein disulfide-isomerase yes no 2 0.0094909 75.788 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 28401000 15165000 4073000 0 1676600 0 7486600 5425 356 5508 24191;24192;24193;24194 16029;16030;16031 16031 3 NFGIGQDIQPK PLFEKRPKNFGIGQDI IGQDIQPKRDLTRFVK K N F P K R 0 0 1 1 0 2 0 2 0 2 0 1 0 1 1 0 0 0 0 0 0 11 0 1215.6248 P62424;Q5T8U3 P62424 38 48 RPL7A 60S ribosomal protein L7a yes no 2 0.0050636 73.9 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 24911000 15649000 2839900 0 2047700 0 4375100 5426 991 5509 24195;24196;24197;24198 16032;16033;16034 16034 3 NFGPKGFGYGQGAGALVHAQ YCKGCYAKNFGPKGFG AGALVHAQ________ K N F A Q - 3 0 1 0 0 2 0 6 1 0 1 1 0 2 1 0 0 0 1 1 0 20 1 1974.97 Q16527;F8VW96 Q16527 174 193 CSRP2 Cysteine and glycine-rich protein 2 yes no 3 8.1638E-101 134.08 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 141610000 0 59609000 0 40404000 0 41595000 5427 1152 5510 24199;24200;24201 16035;16036;16037;16038 16035 4 NFGSYVTHETK TWHCIVGRNFGSYVTH SYVTHETKHFIYFYLG R N F T K H 0 0 1 0 0 0 1 1 1 0 0 1 0 1 0 1 2 0 1 1 0 11 0 1281.599 P63167;Q96FJ2 P63167 61 71 DYNLL1;DYNLL2 Dynein light chain 1, cytoplasmic;Dynein light chain 2, cytoplasmic yes no 2;3 0.0037957 76.332 By matching By matching By matching By matching By matching By MS/MS 1 1 2 2 2 17561000 0 127210 794680 1259900 3134200 12245000 5428 1004 5511 24202;24203;24204;24205;24206;24207;24208;24209 16039;16040 16040 2 NFIHRDVKPDNFLMGLGK RIEYIHSKNFIHRDVK NFLMGLGKKGNLVYII K N F G K K 0 1 2 2 0 0 0 2 1 1 2 2 1 2 1 0 0 0 0 1 0 18 2 2100.0939 P49674;B0QY35;B0QY34;B0QY36;H0Y645;P48730-2;B4DIJ9;P48730;Q59FJ7;H7BYT1 P48730-2 123 140 CSNK1E;CSNK1D Casein kinase I isoform epsilon;Casein kinase I isoform delta no no 4 3.0417E-08 91.932 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 443960000 0 0 0 7431100 11426000 425100000 5429 932;939 5512;5513 24210;24211;24212 16041;16042;16043 16043 110 3 NFILDQTNVSAAAQR EIAARKKRNFILDQTN NVSAAAQRRKMCLFAG R N F Q R R 3 1 2 1 0 2 0 0 0 1 1 0 0 1 0 1 1 0 0 1 0 15 0 1646.8376 Q00839;B3KX72;Q00839-2 Q00839 576 590 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 2 0.0028575 58.246 By matching By matching By matching By matching By matching By MS/MS 1 14938000 0 0 0 0 0 14938000 5430 1022;1023 5514 24213 16044 16044 1 NFILDQTNVSAAAQRRK EIAARKKRNFILDQTN SAAAQRRKMCLFAGFQ R N F R K M 3 2 2 1 0 2 0 0 0 1 1 1 0 1 0 1 1 0 0 1 0 17 2 1931.0337 Q00839;B3KX72;Q00839-2 Q00839 576 592 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 4 0.0043681 47.301 By MS/MS By matching By matching By matching By matching By matching 1 1 1 2889800 1151000 0 0 951990 0 786810 5431 1022;1023 5515 24214;24215;24216 16045 16045 1 NFPNEFAK KCRQWLEKNFPNEFAK NFPNEFAKLTVENSPK K N F A K L 1 0 2 0 0 0 1 0 0 0 0 1 0 2 1 0 0 0 0 0 0 8 0 965.46068 F8VVL1;O43583 F8VVL1 60 67 DENR Density-regulated protein yes no 2 0.010569 91.9 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 2 2 69225000 13142000 4817100 5895700 5829200 17494000 22047000 5432 544 5516 24217;24218;24219;24220;24221;24222;24223;24224;24225 16046;16047;16048;16049 16047 4 NFQEEQINTR YFYERAKRNFQEEQIN QEEQINTRDAKAIAAL R N F T R D 0 1 2 0 0 2 2 0 0 1 0 0 0 1 0 0 1 0 0 0 0 10 0 1277.6 Q8IXB1;Q8IXB1-2;F8W884 Q8IXB1 757 766 DNAJC10 DnaJ homolog subfamily C member 10 yes no 2 5.5768E-15 119.34 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 6622100 628340 1875600 584390 972490 989420 1571900 5433 1287 5517 24226;24227;24228;24229;24230;24231 16050;16051;16052;16053;16054 16052 5 NFQEEQINTRDAK YFYERAKRNFQEEQIN QINTRDAKAIAALISE R N F A K A 1 1 2 1 0 2 2 0 0 1 0 1 0 1 0 0 1 0 0 0 0 13 1 1591.759 Q8IXB1;Q8IXB1-2;F8W884 Q8IXB1 757 769 DNAJC10 DnaJ homolog subfamily C member 10 yes no 3 0.002275 71.268 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 1 15881000 4228300 3829600 3292100 2154500 2376900 0 5434 1287 5518 24232;24233;24234;24235;24236;24237 16055;16056;16057;16058;16059 16058 5 NFRVTAYK HRGFVPEKNFRVTAYK NFRVTAYKAVQEKSSS K N F Y K A 1 1 1 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 1 1 0 8 1 997.53451 Q9Y2W1 Q9Y2W1 520 527 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 1.7502E-15 128.38 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 33581000 3408700 4335100 7718900 0 11982000 6136500 5435 1639 5519 24238;24239;24240;24241;24242 16060;16061 16060 2 NFRVTAYKAVQEK HRGFVPEKNFRVTAYK AYKAVQEKSSSPPPRK K N F E K S 2 1 1 0 0 1 1 0 0 0 0 2 0 1 0 0 1 0 1 2 0 13 2 1552.8362 Q9Y2W1 Q9Y2W1 520 532 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 1.1844E-08 103.11 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 48878000 22843000 2075600 11973000 10313000 1673700 0 5436 1639 5520 24243;24244;24245;24246;24247 16062;16063 16063 2 NFSEVFQK LTFKQVSKNFSEVFQK NFSEVFQKLVPGGKAT K N F Q K L 0 0 1 0 0 1 1 0 0 0 0 1 0 2 0 1 0 0 0 1 0 8 0 997.4869 Q9UQE7 Q9UQE7 1039 1046 SMC3 Structural maintenance of chromosomes protein 3 yes yes 2 0.0088122 93.162 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 7272500 0 1354200 1017800 1165600 3734900 0 5437 1625 5521 24248;24249;24250;24251 16064 16064 1 NFSTVDIQK EKVLRNNKNFSTVDIQ FSTVDIQKNGVKFTNS K N F Q K N 0 0 1 1 0 1 0 0 0 1 0 1 0 1 0 1 1 0 0 1 0 9 0 1050.5346 B4E2Z2;P43246;E9PHA6;B4DL39;B4DSB9 B4E2Z2 472 480 MSH2 DNA mismatch repair protein Msh2 yes no 2 0.00098892 108.57 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 111100000 5220400 17814000 18290000 14332000 18688000 36757000 5438 162 5522 24252;24253;24254;24255;24256;24257 16065;16066;16067;16068;16069;16070;16071;16072 16067 8 NFSTVDIQKNGVKFTNSK EKVLRNNKNFSTVDIQ GVKFTNSKLTSLNEEY K N F S K L 0 0 3 1 0 1 0 1 0 1 0 3 0 2 0 2 2 0 0 2 0 18 2 2026.0484 B4E2Z2;P43246;E9PHA6;B4DL39;B4DSB9 B4E2Z2 472 489 MSH2 DNA mismatch repair protein Msh2 yes no 3 3.6549E-07 82.942 By MS/MS By matching By matching By matching By matching By matching 1 3984700 3984700 0 0 0 0 0 5439 162 5523 24258 16073 16073 0 NFVCEHCFGAFR SFQVKIPKNFVCEHCF EHCFGAFRSSYHLKRH K N F F R S 1 1 1 0 2 0 1 1 1 0 0 0 0 3 0 0 0 0 0 1 0 12 0 1542.6496 Q8NDX6 Q8NDX6 100 111 ZNF740 Zinc finger protein 740 yes yes 2;3 4.2814E-27 123.62 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 1 388170000 46251000 44420000 55568000 32779000 20802000 188350000 5440 1320 5524 24259;24260;24261;24262;24263;24264;24265;24266;24267;24268;24269 16074;16075;16076;16077;16078;16079;16080;16081;16082;16083;16084;16085 16082 12 NFVCEHCFGAFRSSYHLK SFQVKIPKNFVCEHCF FRSSYHLKRHILIHTG K N F L K R 1 1 1 0 2 0 1 1 2 0 1 1 0 3 0 2 0 0 1 1 0 18 1 2258.015 Q8NDX6 Q8NDX6 100 117 ZNF740 Zinc finger protein 740 yes yes 4 0.01418 40.547 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 69051000 0 0 26762000 38920000 3368800 0 5441 1320 5525 24270;24271;24272 16086;16087 16086 2 NFWSVTHPAK FQKLQTRRNFWSVTHP WSVTHPAKAASLSYRR R N F A K A 1 0 1 0 0 0 0 0 1 0 0 1 0 1 1 1 1 1 0 1 0 10 0 1185.5931 Q9P275;Q9P275-2;E9PEW0 Q9P275 1104 1113 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.03377 55.806 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 12355000 0 1303100 1701100 2413900 1914200 5022600 5442 1576 5526 24273;24274;24275;24276;24277 16088 16088 1 NFYQEHPDLAR DELPKFEKNFYQEHPD QEHPDLARRTAQEVET K N F A R R 1 1 1 1 0 1 1 0 1 0 1 0 0 1 1 0 0 0 1 0 0 11 0 1388.6473 P17844;E7ETL9 P17844 57 67 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 2;3 3.1437E-55 140.24 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 3 2 2 3 2 163100000 6618100 29766000 26028000 14216000 30759000 55712000 5443 853 5527 24278;24279;24280;24281;24282;24283;24284;24285;24286;24287;24288;24289;24290 16089;16090;16091;16092;16093;16094;16095;16096;16097;16098 16095 9 NFYQEHPDLARR DELPKFEKNFYQEHPD EHPDLARRTAQEVETY K N F R R T 1 2 1 1 0 1 1 0 1 0 1 0 0 1 1 0 0 0 1 0 0 12 1 1544.7484 P17844;E7ETL9 P17844 57 68 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 2;3 0.00097903 85.355 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 2 2 111850000 7061300 12978000 16261000 8504600 23426000 43619000 5444 853 5528 24291;24292;24293;24294;24295;24296;24297;24298;24299;24300 16099;16100;16101;16102;16103;16104;16105;16106 16100 8 NFYVEHPEVAR SELPKFEKNFYVEHPE VEHPEVARLTPYEVDE K N F A R L 1 1 1 0 0 0 2 0 1 0 0 0 0 1 1 0 0 0 1 2 0 11 0 1359.6571 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 54 64 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 2;3 6.5588E-55 137.4 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 1 3 4 3 512390000 69258000 73484000 51151000 35346000 90687000 192460000 5445 1361;629 5529 24301;24302;24303;24304;24305;24306;24307;24308;24309;24310;24311;24312;24313;24314;24315;24316 16107;16108;16109;16110;16111;16112;16113;16114;16115 16114 9 NGADVNAKDMLK HIVELLVRNGADVNAK VNAKDMLKMTALHWAT R N G L K M 2 0 2 2 0 0 0 1 0 0 1 2 1 0 0 0 0 0 0 1 0 12 1 1274.6289 B4DXA3;Q5SZG2;Q8TAK5 B4DXA3 109 120 GABPB2 GA-binding protein subunit beta-2 yes no 2 0.013993 65.179 By matching By matching By matching By matching By MS/MS By matching 1 1 1590000 0 0 0 0 671270 918760 5446 138 5530 24317;24318 16116 16116 13 1 NGELIYGCK QNNLKIFKNGELIYGC GELIYGCKDARSPVAD K N G C K D 0 0 1 0 1 0 1 2 0 1 1 1 0 0 0 0 0 0 1 0 0 9 0 1052.4961 Q9H8X2 Q9H8X2 213 221 IPPK Inositol-pentakisphosphate 2-kinase yes yes 2 0.014686 77.533 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 4827300 0 0 1292200 0 1555900 1979200 5447 1503 5531 24319;24320;24321 16117;16118;16119 16117 3 NGFPHPEPDCNPSEAASEESNSEIEQEIPVEQK REKSPKLKNGFPHPEP QEIPVEQKEGAFSNFP K N G Q K E 2 0 3 1 1 2 8 1 1 2 0 1 0 1 5 4 0 0 0 1 0 33 0 3693.6013 Q9NR30;Q9NR30-2 Q9NR30 152 184 DDX21 Nucleolar RNA helicase 2 yes no 3 3.1169E-07 42.856 By matching By matching By matching By matching By matching By MS/MS 1 11404000 0 0 0 0 0 11404000 5448 1534 5532 24322 16120 16120 1 NGFVVLKGRPCK MQCSALRKNGFVVLKG VLKGRPCKIVEMSTSK K N G C K I 0 1 1 0 1 0 0 2 0 0 1 2 0 1 1 0 0 0 0 2 0 12 2 1373.7602 F8WCJ1;C9J7B5;C9J4W5;I3L397;Q9GZV4;P63241;P63241-2;I3L504 F8WCJ1 28 39 EIF5A2;EIF5A Eukaryotic translation initiation factor 5A-2;Eukaryotic translation initiation factor 5A-1 yes no 3 1.0546E-06 102.52 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 81886000 7923100 9976300 11834000 11478000 22975000 17700000 5449 228 5533 24323;24324;24325;24326;24327;24328 16121;16122;16123;16124;16125 16124 5 NGIKVNFK YIMADKQKNGIKVNFK NGIKVNFKIRHNIEDG K N G F K I 0 0 2 0 0 0 0 1 0 1 0 2 0 1 0 0 0 0 0 1 0 8 1 918.5287 CON__Q9U6Y5 CON__Q9U6Y5 159 166 yes yes 2 6.3554E-09 122.74 By matching By MS/MS By matching By matching By matching By matching 1 1 1 6972600 0 1928100 1885900 0 0 3158700 + 5450 310 5534 24329;24330;24331 16126 16126 1 NGLNFMYEAPPGAK LMGDERVKNGLNFMYE YEAPPGAKKENKEKEE K N G A K K 2 0 2 0 0 0 1 2 0 0 1 1 1 1 2 0 0 0 1 0 0 14 0 1507.7129 Q86X95-2;Q86X95;F2Z3Q1 Q86X95-2 66 79 CIR1 Corepressor interacting with RBPJ 1 yes no 2 0.034746 51.643 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 5451 1270 5535 24332 16127 16127 148 1 NGLSLAALK AVAASKERNGLSLAAL GLSLAALKKALAAGGY R N G L K K 2 0 1 0 0 0 0 1 0 0 3 1 0 0 0 1 0 0 0 0 0 9 0 885.52837 P16401 P16401 58 66 HIST1H1B Histone H1.5 yes yes 2 0.0062431 92.838 By matching By MS/MS By matching By matching By matching By matching 1 1 50982000 0 45976000 0 5006600 0 0 5452 842 5536 24333;24334 16128 16128 1 NGLSLAALKK AVAASKERNGLSLAAL LSLAALKKALAAGGYD R N G K K A 2 0 1 0 0 0 0 1 0 0 3 2 0 0 0 1 0 0 0 0 0 10 1 1013.6233 P16401 P16401 58 67 HIST1H1B Histone H1.5 yes yes 2 0.035974 96.665 By matching By matching By matching By matching By MS/MS By matching 1 0 0 0 0 0 0 0 5453 842 5537 24335 16129 16129 1 NGPFINREQLK NIIEWREKNGPFINRE FINREQLKKVKGLGPK K N G L K K 0 1 2 0 0 1 1 1 0 1 1 1 0 1 1 0 0 0 0 0 0 11 1 1314.7044 Q8N5C6;Q8N5C6-2;B7Z6X7 Q8N5C6 739 749 SRBD1 S1 RNA-binding domain-containing protein 1 yes no 2;3 2.9051E-07 107.34 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 2 2 33084000 1155500 4143100 6999600 3226300 5279400 12280000 5454 1302 5538 24336;24337;24338;24339;24340;24341;24342;24343;24344;24345 16130;16131;16132;16133;16134;16135;16136 16133 7 NGQDLGVAFK EVELSYAKNGQDLGVA QDLGVAFKISKEVLAG K N G F K I 1 0 1 1 0 1 0 2 0 0 1 1 0 1 0 0 0 0 0 1 0 10 0 1047.5349 Q00839;B3KX72;Q5RI18;Q00839-2 Q00839 424 433 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 2 8.8058E-48 139.43 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 47090000 5950000 0 6562100 5129800 10541000 18907000 5455 1022;1023 5539 24346;24347;24348;24349;24350 16137;16138;16139;16140 16140 4 NGQTREHALLAYTLGVK EFEAGISKNGQTREHA LAYTLGVKQLIVGVNK K N G V K Q 2 1 1 0 0 1 1 2 1 0 3 1 0 0 0 0 2 0 1 1 0 17 1 1870.0061 Q5VTE0;P68104;F8W6I0;Q05639 Q5VTE0 130 146 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 3;4 2.1928E-181 156 By matching By MS/MS By matching By matching By MS/MS By MS/MS 2 2 1 2 1 272780000 0 50511000 51776000 34884000 51958000 83647000 5456 1006 5540 24351;24352;24353;24354;24355;24356;24357;24358 16141;16142;16143;16144;16145 16141 5 NGRNAADPISGDFK HSSEHAGRNGRNAADP DPISGDFKEISSVKLV R N G F K E 2 1 2 2 0 0 0 2 0 1 0 1 0 1 1 1 0 0 0 0 0 14 1 1460.7008 P46013;F5H4V4 P46013 191 204 MKI67 Antigen KI-67 yes no 3 0.015936 47.037 By matching By matching By matching By matching By matching By MS/MS 1 1 1247400 0 747030 0 0 0 500410 5457 919 5541 24359;24360 16146 16146 1 NGSLRNADSEIK SEGGPLYKNGSLRNAD RNADSEIKHSTPSPTR K N G I K H 1 1 2 1 0 0 1 1 0 1 1 1 0 0 0 2 0 0 0 0 0 12 1 1302.6528 P49792;E9PGT0;P0DJD0;P0DJD1;F8VYC4;Q99666;O14715;Q99666-2;F8W705;Q7Z3J3;B4DZH4 P49792 765 776 RANBP2;RGPD1;RGPD2;RGPD5;RGPD8;RGPD4 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RanBP2-like and GRIP domain-containing protein 4 no no 2;3 0.0090035 69.815 By matching By MS/MS By MS/MS By matching By matching By matching 2 2 2 2 2 2 17293000 2468000 3635100 5027700 1619800 2646900 1895300 5458 945;1251 5542 24361;24362;24363;24364;24365;24366;24367;24368;24369;24370;24371;24372 16147;16148;16149 16149 3 NGSQSQTHSLQANDTFNK NFFRVSFKNGSQSQTH QANDTFNKQQWLNCIR K N G N K Q 1 0 3 1 0 3 0 1 1 0 1 1 0 1 0 3 2 0 0 0 0 18 0 1975.8984 Q9NR81-4;E7EU49;Q9NR81;Q9NR81-3;E9PG37;Q9NR81-2 Q9NR81-4 218 235 ARHGEF3 Rho guanine nucleotide exchange factor 3 yes no 3 0.0013106 60.307 By matching By matching By matching By matching By matching By MS/MS 1 1 2044800 0 0 199640 0 0 1845100 5459 384 5543 24373;24374 16150 16150 1 NGSTAVAESVASPQK KPATGERKNGSTAVAE ESVASPQKTMSVLSCI K N G Q K T 3 0 1 0 0 1 1 1 0 0 0 1 0 0 1 3 1 0 0 2 0 15 0 1444.7158 Q12888;Q12888-2;A6NNK5;F8VY86;C9JXV0 Q12888 1017 1031 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.027277 40.493 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 3700800 0 0 0 681850 1287200 1731800 5460 1063 5544 24375;24376;24377 16151;16152 16152 2 NGTGGLFQGKTPLRK LENKLLGKNGTGGLFQ QGKTPLRKANLQQAIV K N G R K A 0 1 1 0 0 1 0 4 0 0 2 2 0 1 1 0 2 0 0 0 0 15 2 1572.8736 Q9ULW0;Q96RR5 Q9ULW0 49 63 TPX2;HCA90 Targeting protein for Xklp2 yes no 3 0.0065515 67.095 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 110210000 0 34763000 0 261150 18671000 56510000 5461 1611 5545 24378;24379;24380;24381 16153 16153 1 NGTLTFGDVDTSDEK KKQVKIGRNGTLTFGD DVDTSDEKSAQEEVEV R N G E K S 0 0 1 3 0 0 1 2 0 0 1 1 0 1 0 1 3 0 0 1 0 15 0 1597.7108 Q6PJG2;F6RU81 Q6PJG2 883 897 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 2 0.038792 38.116 By matching By matching By matching By matching By matching By MS/MS 1 654370 0 0 0 0 0 654370 5462 1231 5546 24382 16154 16154 1 NGTQLMIR AAWGALEKNGTQLMIR NGTQLMIRSYELGVLF K N G I R S 0 1 1 0 0 1 0 1 0 1 1 0 1 0 0 0 1 0 0 0 0 8 0 931.49094 G3V2F4;E7EPD8;Q9NUW8;H0YJ44;Q86TV8 G3V2F4 528 535 TDP1 Tyrosyl-DNA phosphodiesterase 1 yes no 2 0.011379 91.318 By matching By matching By matching By matching By matching By MS/MS 1 1 2598300 0 0 0 0 244610 2353700 5463 357 5547 24383;24384 16155 16155 1 NGTVDGTSENTEDGLDRK SPLCLNSKNGTVDGTS TEDGLDRKDSKQPRKK K N G R K D 0 1 2 3 0 0 2 3 0 0 1 1 0 0 0 1 3 0 0 1 0 18 1 1906.8504 Q8N3X6-2;C9JI46;Q8N3X6 Q8N3X6-2 104 121 LCORL Ligand-dependent nuclear receptor corepressor-like protein yes no 3 0.0029652 46.121 By matching By matching By matching By matching By MS/MS By matching 1 1 1 2067700 0 0 0 552180 488640 1026900 5464 248 5548 24385;24386;24387 16156 16156 1 NGVFVDGAFQRR FYLRCLGKNGVFVDGA VDGAFQRRGAPALQLP K N G R R G 1 2 1 1 0 1 0 2 0 0 0 0 0 2 0 0 0 0 0 2 0 12 1 1364.6949 P85037;F5H8G8 P85037 166 177 FOXK1 Forkhead box protein K1 yes no 3 0.0022183 65.232 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 6732000 0 915680 1148700 491510 1143200 3032800 5465 1017 5549 24388;24389;24390;24391;24392 16157;16158;16159 16159 3 NGVIFQEGGEK CLLMAQQRNGVIFQEG IFQEGGEKHLKLVGKL R N G E K H 0 0 1 0 0 1 2 3 0 1 0 1 0 1 0 0 0 0 0 1 0 11 0 1176.5775 Q8NI27 Q8NI27 751 761 THOC2 THO complex subunit 2 yes yes 2 0.00075258 75.788 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 8393000 486200 781550 0 2277100 1271000 3577200 5466 1330 5550 24393;24394;24395;24396;24397 16160;16161;16162 16161 2 NGVLPQATGDQK KSEPVSPKNGVLPQAT PQATGDQKSGGKCETD K N G Q K S 1 0 1 1 0 2 0 2 0 0 1 1 0 0 1 0 1 0 0 1 0 12 0 1226.6255 Q3L8U1-2;Q3L8U1-3;Q3L8U1 Q3L8U1-2 2082 2093 CHD9 Chromodomain-helicase-DNA-binding protein 9 yes no 2 0.0017984 79.23 By matching By matching By matching By matching By matching By MS/MS 1 1 857970 0 0 0 0 263900 594070 5467 1166 5551 24398;24399 16163 16163 1 NGVQAMVEFDSVQSAQR QRIVIFRKNGVQAMVE DSVQSAQRAKASLNGA K N G Q R A 2 1 1 1 0 3 1 1 0 0 0 0 1 1 0 2 0 0 0 3 0 17 0 1864.8738 P14866;A6NIT8;B4DPK8;B4DVF8 P14866 230 246 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 2 1.8439E-90 131.45 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 16428000 3412000 13016000 0 0 0 0 5468 838 5552;5553 24400;24401 16164;16165 16164 88 2 NGVQAMVEFDSVQSAQRAK QRIVIFRKNGVQAMVE VQSAQRAKASLNGADI K N G A K A 3 1 1 1 0 3 1 1 0 0 0 1 1 1 0 2 0 0 0 3 0 19 1 2064.0058 P14866;A6NIT8;B4DPK8;B4DVF8 P14866 230 248 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 2 0.0032648 57.708 By matching By MS/MS By matching By matching By matching By matching 1 4199800 0 4199800 0 0 0 0 5469 838 5554 24402 16166 16166 1 NGYNLRRHEAIHTGAK ALCAKEFKNGYNLRRH EAIHTGAKAGRVPSGA K N G A K A 2 2 2 0 0 0 1 2 2 1 1 1 0 0 0 0 1 0 1 0 0 16 2 1835.9503 C6G496;P56270;G5E927 C6G496 178 193 MAZ Myc-associated zinc finger protein yes no 4 0.010732 44.252 By matching By matching By matching By matching By matching By MS/MS 1 1 16845000 0 0 0 0 9819000 7025500 5470 219 5555 24403;24404 16167 16167 1 NHDHQEIAVPVANLK NVVEVVARNHDHQEIA AVPVANLKLSCQPMLS R N H L K L 2 0 2 1 0 1 1 0 2 1 1 1 0 0 1 0 0 0 0 2 0 15 0 1683.8693 O75607 O75607 88 102 NPM3 Nucleoplasmin-3 yes yes 3 0.0013981 68.168 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 12564000 1189200 1865400 2182800 821990 1962000 4542500 5471 747 5556 24405;24406;24407;24408;24409;24410 16168;16169;16170;16171 16169 3 NHETTNLSIQQK RLNQRERRNHETTNLS TNLSIQQKRHGRVKTW R N H Q K R 0 0 2 0 0 2 1 0 1 1 1 1 0 0 0 1 2 0 0 0 0 12 0 1411.7056 Q9GZR1-2;Q9GZR1;E7EQN6;B3KMM0;H0Y8Y8 Q9GZR1-2 718 729 SENP6 Sentrin-specific protease 6 yes no 3 0.0015144 81.709 By matching By matching By matching By matching By matching By MS/MS 1 1 941980 0 225610 0 0 0 716370 5472 361 5557 24411;24412 16172 16172 1 NHFKGGQSGLNLSK LEKLIIHKNHFKGGQS QSGLNLSKNFLDPKEL K N H S K N 0 0 2 0 0 1 0 3 1 0 2 2 0 1 0 2 0 0 0 0 0 14 1 1485.7688 Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-4;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9;Q9NW36 Q9NRZ9-6 620 633 HELLS Lymphoid-specific helicase yes no 3 0.0068027 53.869 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 3653100 0 771350 1824800 0 384540 672380 5473 1540 5558 24413;24414;24415;24416 16173 16173 1 NHLEEHTDTCLPK MYAYRWIRNHLEEHTD HTDTCLPKQSVYDAYR R N H P K Q 0 0 1 1 1 0 2 0 2 0 2 1 0 0 1 0 2 0 0 0 0 13 0 1592.7253 F8W689;P48382;F6TYI9;F6X9D6;F6R6G4;F6UE82;F6U6P3 F8W689 98 110 RFX5 DNA-binding protein RFX5 yes no 3 0.0041095 61.423 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1306300 119100 374070 0 0 0 813160 5474 553 5559 24417;24418;24419 16174 16174 1 NHPEEFCEFVK NLSYHLEKNHPEEFCE EEFCEFVKSNTEQMRE K N H V K S 0 0 1 0 1 0 3 0 1 0 0 1 0 2 1 0 0 0 0 1 0 11 0 1434.6238 O96006;C9JXP4 O96006 70 80 ZBED1 Zinc finger BED domain-containing protein 1 yes no 2;3 1.9361E-70 148.28 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 21203000 0 4737100 324670 0 2438500 13702000 5475 778 5560 24420;24421;24422;24423;24424;24425;24426;24427 16175;16176;16177;16178;16179;16180 16179 6 NHVAAHGQSLLKCPR FLLESLLKNHVAAHGQ QSLLKCPRCNFESNFP K N H P R C 2 1 1 0 1 1 0 1 2 0 2 1 0 0 1 1 0 0 0 1 0 15 1 1686.8736 Q96JM3 Q96JM3 755 769 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 4 0.00060665 73.386 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 18274000 0 3486400 2133000 1463500 6343000 4848100 5476 1399 5561 24428;24429;24430;24431;24432 16181;16182;16183;16184 16183 4 NIDQCSEIVK EKFYRIKKNIDQCSEI DQCSEIVKCSVSSLGF K N I V K C 0 0 1 1 1 1 1 0 0 2 0 1 0 0 0 1 0 0 0 1 0 10 0 1204.5758 Q92878-2;Q92878;Q92878-3 Q92878-2 1298 1307 RAD50 DNA repair protein RAD50 yes no 2 0.0030207 93.096 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 9527700 951130 1719400 0 1522500 4871000 463740 5477 1362 5562 24433;24434;24435;24436;24437 16185;16186;16187 16186 3 NIGLGFKTPK EKLPRYYKNIGLGFKT GLGFKTPKEAIEGTYI K N I P K E 0 0 1 0 0 0 0 2 0 1 1 2 0 1 1 0 1 0 0 0 0 10 1 1073.6233 P62280 P62280 39 48 RPS11 40S ribosomal protein S11 yes yes 2 0.007765 93.442 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 44474000 0 6018100 5341600 5794400 12690000 14630000 5478 989 5563 24438;24439;24440;24441;24442 16188;16189;16190 16190 3 NIHHHQILAINRGENLK QHFSCNIRNIHHHQIL INRGENLKVLTVKVNI R N I L K V 1 1 3 0 0 1 1 1 3 3 2 1 0 0 0 0 0 0 0 0 0 17 1 2006.0922 Q8N5C6;Q8N5C6-2 Q8N5C6 430 446 SRBD1 S1 RNA-binding domain-containing protein 1 yes no 4 0.0028681 52.372 By matching By matching By matching By matching By matching By MS/MS 1 2575000 0 0 0 0 0 2575000 5479 1302 5564 24443 16191 16191 1 NIIEWREK GLNANRAKNIIEWREK NIIEWREKNGPFINRE K N I E K N 0 1 1 0 0 0 2 0 0 2 0 1 0 0 0 0 0 1 0 0 0 8 1 1086.5822 Q8N5C6;Q8N5C6-2;B7Z6X7 Q8N5C6 731 738 SRBD1 S1 RNA-binding domain-containing protein 1 yes no 2 0.039898 85.161 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 9241600 0 1068200 2644100 2208000 1504700 1816600 5480 1302 5565 24444;24445;24446;24447;24448 16192 16192 1 NIILEEGK FCLSEDKKNIILEEGK NIILEEGKEILVGDVG K N I G K E 0 0 1 0 0 0 2 1 0 2 1 1 0 0 0 0 0 0 0 0 0 8 0 914.5073 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 46 53 CFL1 Cofilin-1 yes no 2 0.015568 84.498 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 17305000 1280500 3326300 2533200 729290 1917800 7518400 5481 461 5566 24449;24450;24451;24452;24453;24454 16193 16193 1 NIIRPQLK TFRLLHAKNIIRPQLK NIIRPQLKFREKIDNS K N I L K F 0 1 1 0 0 1 0 0 0 2 1 1 0 0 1 0 0 0 0 0 0 8 1 980.6131 Q01780;Q01780-2;B4DKG8 Q01780 179 186 EXOSC10 Exosome component 10 yes no 2 0.038771 86.794 By matching By MS/MS By matching By matching By matching By matching 1 1 1 4908900 0 954740 1782100 0 0 2172100 5482 1030 5567 24455;24456;24457 16194 16194 1 NILDRQDPPSVVVTSHQAPGEK RKYLKYSKNILDRQDP SHQAPGEKKKLKCLAY K N I E K K 1 1 1 2 0 2 1 1 1 1 1 1 0 0 3 2 1 0 0 3 0 22 1 2386.2241 P25311 P25311 199 220 AZGP1 Zinc-alpha-2-glycoprotein yes yes 4 0.013979 37.817 By matching By matching By MS/MS By matching By matching By matching 1 4455800 0 0 4455800 0 0 0 5483 874 5568 24458 16195 16195 1 NINTFVETPVQK KPAVSDEKNINTFVET FVETPVQKLDLLGNLP K N I Q K L 0 0 2 0 0 1 1 0 0 1 0 1 0 1 1 0 2 0 0 2 0 12 0 1388.73 P46013;F5H4V4;P46013-2 P46013 2399 2410 MKI67 Antigen KI-67 no no 2 0 253.97 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 2 1 335280000 78004000 40754000 94824000 0 14743000 106960000 5484 919;920 5569 24459;24460;24461;24462;24463;24464;24465;24466 16196;16197;16198;16199;16200;16201;16202 16202 7 NIPCAAVSPNRSK LNVEAARKNIPCAAVS AVSPNRSKCERNTVAD K N I S K C 2 1 2 0 1 0 0 0 0 1 0 1 0 0 2 2 0 0 0 1 0 13 1 1412.7194 Q13118-2;Q13118 Q13118-2 188 200 KLF10 Krueppel-like factor 10 yes no 3 0.0086828 57.106 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 5401900 877850 310960 623180 1176200 1609400 804280 5485 1070 5570 24467;24468;24469;24470;24471;24472 16203;16204 16204 2 NIQKLPVESK SGRSTEFRNIQKLPVE QKLPVESKSEETNTEI R N I S K S 0 0 1 0 0 1 1 0 0 1 1 2 0 0 1 1 0 0 0 1 0 10 1 1154.6659 P46013;F5H4V4;P46013-2 P46013 883 892 MKI67 Antigen KI-67 no no 2 9.6688E-61 143.5 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 21534000 1534400 2478000 3335700 1315200 5702400 7167800 5486 919;920 5571 24473;24474;24475;24476;24477;24478 16205;16206;16207;16208;16209 16206 5 NIQVSHQEFSK KKQEGLLKNIQVSHQE VSHQEFSKMKQSNNEA K N I S K M 0 0 1 0 0 2 1 0 1 1 0 1 0 1 0 2 0 0 0 1 0 11 0 1315.6521 Q8WUM4;E9PFU1 Q8WUM4 628 638 PDCD6IP Programmed cell death 6-interacting protein yes no 2;3 0.0027476 85.973 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 15162000 1112900 2253600 2629300 1278700 2543600 5344100 5487 429 5572 24479;24480;24481;24482;24483;24484;24485;24486;24487;24488;24489;24490 16210;16211;16212;16213;16214;16215;16216 16216 7 NITLDDASAPR DRLVNRLKNITLDDAS LDDASAPRLMVLRQPR K N I P R L 2 1 1 2 0 0 0 0 0 1 1 0 0 0 1 1 1 0 0 0 0 11 0 1171.5833 E9PLT0;O75534-2;O75534;E9PGZ0;G5E9Q2 E9PLT0 629 639 CSDE1 Cold shock domain-containing protein E1 yes no 2 0.0049151 74.611 By matching By matching By matching By matching By matching By MS/MS 1 1594800 0 0 0 0 0 1594800 5488 433 5573 24491 16217 16217 1 NIVVIDDDKSETCNEDLAGTTDEK YQFKDMPKNIVVIDDD LAGTTDEKSLERVSLS K N I E K S 1 0 2 5 1 0 3 1 0 2 1 2 0 0 0 1 3 0 0 2 0 24 1 2680.2021 B7Z8R4;Q15723-4;E9PCX3;Q15723-2;Q15723-3;Q15723-1;Q15723;D6R9B1 B7Z8R4 98 121 ELF2 ETS-related transcription factor Elf-2 yes no 3 1.0471E-10 80.868 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 37160000 23603000 1631500 9413800 0 0 2511400 5489 196 5574 24492;24493;24494;24495 16218;16219;16220;16221 16218 3 NIWVSGLSSNTK GSSGSSTKNIWVSGLS SGLSSNTKAADLKNLF K N I T K A 0 0 2 0 0 0 0 1 0 1 1 1 0 0 0 3 1 1 0 1 0 12 0 1304.6725 Q9NWH9;H7BXE3 Q9NWH9 385 396 SLTM SAFB-like transcription modulator yes no 2 0.0033379 70.68 By matching By MS/MS By matching By matching By matching By matching 1 1 12333000 0 7224900 0 5108400 0 0 5490 1554 5575 24496;24497 16222 16222 1 NIYAFMGTPVQK KPAVSGEKNIYAFMGT FMGTPVQKLDLTENLT K N I Q K L 1 0 1 0 0 1 0 1 0 1 0 1 1 1 1 0 1 0 1 1 0 12 0 1367.6908 P46013;F5H4V4;P46013-2 P46013 1550 1561 MKI67 Antigen KI-67 no no 2 0.022214 57.175 By matching By matching By matching By MS/MS By matching By matching 1 0 0 0 0 0 0 0 5491 919;920 5576 24498 16223 16223 106 1 NIYSEELR KEELDFQKNIYSEELR NIYSEELRETKRRHET K N I L R E 0 1 1 0 0 0 2 0 0 1 1 0 0 0 0 1 0 0 1 0 0 8 0 1022.5033 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCJ4;Q5TCI8;H0YAB0 P02545 209 216 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.008839 93.143 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 24176000 1095500 5518600 0 1387700 3804200 12370000 5492 783 5577 24499;24500;24501;24502;24503 16224;16225 16224 2 NKEINSDQATQGNISSDRGK VKNIDPVKNKEINSDQ NISSDRGKKRTVTAAG K N K G K K 1 1 3 2 0 2 1 2 0 2 0 2 0 0 0 3 1 0 0 0 0 20 2 2161.036 Q29RF7 Q29RF7 1218 1237 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 3 0.016446 45.347 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 2576100 502080 802510 0 312790 0 958680 5493 1159 5578 24504;24505;24506;24507 16226 16226 1 NKETLGSEAVSSNVIDYGHASK PNLPSQSRNKETLGSE IDYGHASKYGYTEDPL R N K S K Y 2 0 2 1 0 0 2 2 1 1 1 2 0 0 0 4 1 0 1 2 0 22 1 2305.1186 Q14966-3;Q14966;Q14966-4;Q14966-2;C9JBI6;F5H330 Q14966-3 195 216 ZNF638 Zinc finger protein 638 yes no 3;4 5.1227E-06 70.174 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 4949300 1037100 0 0 640460 1047200 2224600 5494 1118 5579 24508;24509;24510;24511 16227;16228 16227 2 NKEVFIPQDGK HLYNSLTRNKEVFIPQ VFIPQDGKKVTWYCCG R N K G K K 0 0 1 1 0 1 1 1 0 1 0 2 0 1 1 0 0 0 0 1 0 11 1 1273.6667 P49589;P49589-3;P49589-2;B4DKY1;E9PRS8 P49589 38 48 CARS Cysteine--tRNA ligase, cytoplasmic yes no 2 0.014817 71.153 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2496200 718260 253940 0 736610 0 787360 5495 938 5580 24512;24513;24514;24515;24516 16229;16230;16231 16230 3 NKEVFIPQDGKK HLYNSLTRNKEVFIPQ FIPQDGKKVTWYCCGP R N K K K V 0 0 1 1 0 1 1 1 0 1 0 3 0 1 1 0 0 0 0 1 0 12 2 1401.7616 P49589;P49589-3;P49589-2;B4DKY1;E9PRS8 P49589 38 49 CARS Cysteine--tRNA ligase, cytoplasmic yes no 3 0.012449 66.538 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 12916000 0 900500 1297700 1461800 6013100 3243000 5496 938 5581 24517;24518;24519;24520;24521 16232 16232 1 NKFQPPQVPDQAPAEAPTEK QKNKRRCKNKFQPPQV PAEAPTEKTEVSPVPR K N K E K T 3 0 1 1 0 3 2 0 0 0 0 2 0 1 5 0 1 0 0 1 0 20 1 2191.0909 E9PPY3;O43159 E9PPY3 200 219 RRP8 Ribosomal RNA-processing protein 8 yes no 3 2.194E-38 109.13 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 16671000 7926500 801340 0 0 4516400 3427000 5497 462 5582 24522;24523;24524;24525 16233;16234;16235 16235 3 NKIEPLGYCEDAESNRQLESTEFNK KTENTLERNKIEPLGY LESTEFNKSNLEVVDT R N K N K S 1 1 3 1 1 1 5 1 0 1 2 2 0 1 1 2 1 0 1 0 0 25 2 2970.3665 Q92576-2;Q92576;E7EVH3;E9PE34;B3KP41;D6R9X2 Q92576-2 306 330 PHF3 PHD finger protein 3 yes no 3;4 1.3565E-64 110.33 By matching By MS/MS By matching By MS/MS By matching By MS/MS 2 1 1 42742000 0 18462000 0 3590500 0 20689000 5498 1353 5583 24526;24527;24528;24529 16236;16237;16238;16239 16239 4 NKLASTPFKGGTLFGGEVCK CKINLASKNKLASTPF LFGGEVCKVIKKRGNK K N K C K V 1 0 1 0 1 0 1 4 0 0 2 3 0 2 1 1 2 0 0 1 0 20 2 2110.0881 P42166 P42166 666 685 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 3;4 0.00010369 70.334 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 2 2 2 84385000 0 7916700 32154000 36876000 7437700 0 5499 913 5584 24530;24531;24532;24533;24534;24535;24536 16240;16241;16242;16243;16244;16245 16244 6 NKLTGEVVALKK YGVVYKARNKLTGEVV GEVVALKKIRLDTETE R N K K K I 1 0 1 0 0 0 1 1 0 0 2 3 0 0 0 0 1 0 0 2 0 12 2 1298.7922 P24941-2;P24941;G3V5T9;E7ESI2;G3V317 P24941-2 23 34 CDK2 Cyclin-dependent kinase 2 yes no 3 0.010167 73.273 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 5500 589 5585 24537 16246 16246 1 NKPGPYSSVPPPSAPPPK EEQKKPMKNKPGPYSS PPSAPPPKKSLGTQPP K N K P K K 1 0 1 0 0 0 0 1 0 0 0 2 0 0 8 3 0 0 1 1 0 18 1 1815.9519 Q14978;Q14978-3;Q14978-2 Q14978 284 301 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 3 0.017198 39.585 By matching By matching By matching By matching By MS/MS By matching 1 1085700 0 0 0 0 1085700 0 5501 1120 5586 24538 16247 16247 1 NKPIVNIDPQTAELNHLK ADRARKIKNKPIVNID TAELNHLKQQVQQLQV K N K L K Q 1 0 3 1 0 1 1 0 1 2 2 2 0 0 2 0 1 0 0 1 0 18 1 2043.1113 O95239;O95239-2 O95239 338 355 KIF4A Chromosome-associated kinesin KIF4A yes no 4 0.0025375 52.172 By matching By MS/MS By matching By matching By matching By matching 1 929960 0 929960 0 0 0 0 5502 768 5587 24539 16248 16248 1 NKPKPAAEPSNGIPDSSK KKKNKKKKNKPKPAAE NGIPDSSKSVSIQEEQ K N K S K S 2 0 2 1 0 0 1 1 0 1 0 3 0 0 4 3 0 0 0 0 0 18 2 1835.9377 Q86XZ4;H7BYM7;F8VS10 Q86XZ4 94 111 SPATS2 Spermatogenesis-associated serine-rich protein 2 yes no 3 0.0053625 56.424 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 4502600 332650 951940 507980 347450 1014100 1348400 5503 659 5588 24540;24541;24542;24543;24544;24545 16249 16249 1 NKSNESVDIQDQEEK KKRSGKWKNKSNESVD DIQDQEEKVVKQECIK K N K E K V 0 0 2 2 0 2 3 0 0 1 0 2 0 0 0 2 0 0 0 1 0 15 1 1761.8017 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1574 1588 RIF1 Telomere-associated protein RIF1 yes no 3 8.69E-56 127.05 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 14749000 4300200 148530 3879200 1477700 2179300 2764100 5504 1201 5589 24546;24547;24548;24549;24550;24551;24552 16250;16251;16252;16253;16254;16255 16252 6 NLAGRSVEDCAAK SLLSLSRKNLAGRSVE SVEDCAAKCEEETDFV K N L A K C 3 1 1 1 1 0 1 1 0 0 1 1 0 0 0 1 0 0 0 1 0 13 1 1389.6671 CON__P06868 CON__P06868 47 59 yes yes 3 0.0099828 55.776 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 7102700 0 840820 1203900 2497200 1666200 894540 + 5505 295 5590 24553;24554;24555;24556;24557 16256 16256 1 NLDIERPTYTNLNR AIYDICRRNLDIERPT PTYTNLNRLIGQIVSS R N L N R L 0 2 3 1 0 0 1 0 0 1 2 0 0 0 1 0 2 0 1 0 0 14 1 1717.8747 G3V1U9;Q9BQE3;Q71U36;P68363;F5H5D3;F8VXZ4;Q6PEY2;Q13748;Q13748-2;F8VVB9;Q9NY65-2;Q9NY65;C9J2C0;F8VQQ4;C9JDS9;A8MUB1;P68366 G3V1U9 181 194 TUBA1A;TUBA1C;TUBA1B;TUBA3E;TUBA3C;TUBA8;TUBA4A Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain;Tubulin alpha-4A chain no no 3 0.0048506 57.106 By MS/MS By matching By matching By matching By matching By matching 1 5383800 5383800 0 0 0 0 0 5506 518;44 5591 24558 16257 16257 1 NLDNAVLIGETGSGK GQLLAQLRNLDNAVLI IGETGSGKTTQIPQYL R N L G K T 1 0 2 1 0 0 1 3 0 1 2 1 0 0 0 1 1 0 0 1 0 15 0 1486.7627 Q9H6R0 Q9H6R0 89 103 DHX33 Putative ATP-dependent RNA helicase DHX33 yes yes 2 1.3369E-08 98.508 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 25768000 5339100 1685000 0 696000 2987300 15061000 5507 1496 5592 24559;24560;24561;24562;24563 16258;16259;16260 16259 2 NLDSTTVAIHDEEIYCK FLCMVCRKNLDSTTVA HDEEIYCKSCYGKKYG K N L C K S 1 0 1 2 1 0 2 0 1 2 1 1 0 0 0 1 2 0 1 1 0 17 0 2006.9255 Q16527;F8VW96;F8VQR7 Q16527 43 59 CSRP2 Cysteine and glycine-rich protein 2 yes no 2;3 0 203.89 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 1 1 2 420160000 0 177940000 85560000 5151300 4098600 147400000 5508 1152 5593 24564;24565;24566;24567;24568;24569;24570 16261;16262;16263;16264;16265;16266 16264 6 NLDSTTVAVHGEEIYCK FLCMVCKKNLDSTTVA HGEEIYCKSCYGKKYG K N L C K S 1 0 1 1 1 0 2 1 1 1 1 1 0 0 0 1 2 0 1 2 0 17 0 1934.9044 P21291;E9PND2;B3KVC9;E9PS42 P21291 43 59 CSRP1 Cysteine and glycine-rich protein 1 yes no 2;3 8.78E-08 91.657 By MS/MS By matching By matching By MS/MS By matching By matching 2 1 1 1 18810000 13807000 978510 0 2467200 0 1557600 5509 859 5594 24571;24572;24573;24574;24575 16267;16268;16269;16270 16269 4 NLDSVQKLPK NDSKSTGKNLDSVQKL DSVQKLPKVNKTKSEK K N L P K V 0 0 1 1 0 1 0 0 0 0 2 2 0 0 1 1 0 0 0 1 0 10 1 1140.6503 Q14241 Q14241 473 482 TCEB3 Transcription elongation factor B polypeptide 3 yes yes 2 0.010951 88.134 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 2919000 574970 896170 380870 0 333990 733030 5510 1103 5595 24576;24577;24578;24579;24580 16271;16272 16271 2 NLEDDTLSECKQVSDK HSIRCKSKNLEDDTLS ECKQVSDKAVSLQRKL K N L D K A 0 0 1 3 1 1 2 0 0 0 2 2 0 0 0 2 1 0 0 1 0 16 1 1879.8469 Q14966-3;Q14966;Q14966-4;Q14966-2;C9JBI6;F5H330 Q14966-3 643 658 ZNF638 Zinc finger protein 638 yes no 3 0.0060525 48.216 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 4785700 0 1395400 1059700 756190 0 1574400 5511 1118 5596 24581;24582;24583;24584 16273;16274 16274 2 NLEEAAAAEQGGGCDQVDSSPVPR AGSLDRSRNLEEAAAA VDSSPVPRYRVNAKKL R N L P R Y 4 1 1 2 1 2 3 3 0 0 1 0 0 0 2 2 0 0 0 2 0 24 0 2456.0874 Q9Y2U8 Q9Y2U8 333 356 LEMD3 Inner nuclear membrane protein Man1 yes yes 2 0.0040697 42.347 By MS/MS By matching By matching By matching By matching By matching 1 1565600 1565600 0 0 0 0 0 5512 1638 5597 24585 16275 16275 1 NLEEGHSSTVAAHYNELQEVGLEK EDVPEKQKNLEEGHSS LQEVGLEKRSQSRIFY K N L E K R 2 0 2 0 0 1 5 2 2 0 3 1 0 0 0 2 1 0 1 2 0 24 0 2653.262 O43148;O43148-2 O43148 140 163 RNMT mRNA cap guanine-N7 methyltransferase yes no 3;4 1.5761E-264 161.97 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 270030000 35568000 0 63221000 93389000 4710200 73136000 5513 709 5598 24586;24587;24588;24589;24590;24591;24592;24593;24594 16276;16277;16278;16279;16280;16281;16282;16283;16284;16285;16286;16287 16279 12 NLEENYCRNPNGEK TPENFPCKNLEENYCR CRNPNGEKAPWCYTTN K N L E K A 0 1 4 0 1 0 3 1 0 0 1 1 0 0 1 0 0 0 1 0 0 14 1 1735.7584 CON__P06868 CON__P06868 325 338 yes yes 3 0.02587 43.03 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4134900 0 683950 0 386260 929260 2135400 + 5514 295 5599 24595;24596;24597;24598 16288 16288 1 NLEENYCRNPNGEKAPWCYTTNSEVR TPENFPCKNLEENYCR YTTNSEVRWEYCTIPS K N L V R W 1 2 5 0 2 0 4 1 0 0 1 1 0 0 2 1 2 1 2 1 0 26 2 3200.404 CON__P06868 CON__P06868 325 350 yes yes 3;4 1.051E-13 76.241 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 218980000 28073000 25088000 26048000 12168000 27106000 100500000 + 5515 295 5600 24599;24600;24601;24602;24603;24604;24605 16289;16290;16291;16292;16293;16294;16295 16290 6 NLEPGKQISR SLQISNEKNLEPGKQI EPGKQISRSSGEQQNK K N L S R S 0 1 1 0 0 1 1 1 0 1 1 1 0 0 1 1 0 0 0 0 0 10 1 1140.6251 F5H082;Q9UER7;Q9UER7-2 F5H082 432 441 DAXX Death domain-associated protein 6 yes no 2 0.024737 75.652 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 9285800 721270 1720600 2244100 482160 1262000 2855700 5516 503 5601 24606;24607;24608;24609;24610;24611 16296;16297;16298;16299 16297 4 NLEQQVNHSQQGHTNANAVLFSQVK QTLSAPTKNLEQQVNH AVLFSQVKVTPETHML K N L V K V 2 0 4 0 0 5 1 1 2 0 2 1 0 1 0 2 1 0 0 3 0 25 0 2790.3798 Q6ZW49-2;H0Y2Z7;Q6ZW49-4;Q6ZW49-3;Q6ZW49-1;Q6ZW49 Q6ZW49-2 122 146 PAXIP1 PAX-interacting protein 1 yes no 4 0.0042101 39.215 By matching By matching By matching By matching By matching By MS/MS 1 2237900 0 0 0 0 0 2237900 5517 605 5602 24612 16300 16300 1 NLETDNKIKQTSSSDSHSLNNK HDFTNKEKNLETDNKI DSHSLNNKILNREVVN K N L N K I 0 0 4 2 0 1 1 0 1 1 2 3 0 0 0 5 2 0 0 0 0 22 2 2459.1888 Q9H9A7 Q9H9A7 420 441 RMI1 RecQ-mediated genome instability protein 1 yes yes 4 0.0024903 48.567 By matching By MS/MS By matching By matching By matching By matching 1 1 1 5178000 1291300 3422800 463930 0 0 0 5518 1506 5603 24613;24614;24615 16301 16301 1 NLETSSAFQSSSQK DDLIDSQKNLETSSAF AFQSSSQKLTSQKEQK K N L Q K L 1 0 1 0 0 2 1 0 0 0 1 1 0 1 0 5 1 0 0 0 0 14 0 1512.7056 A6NF48;Q9Y2X9;F5H1Z5 A6NF48 738 751 ZNF281 Zinc finger protein 281 yes no 2 9.7496E-05 89.624 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 7692500 603600 1292300 1558300 620880 1695100 1922300 5519 19 5604 24616;24617;24618;24619;24620;24621 16302;16303;16304;16305;16306;16307 16306 5 NLFIEAGCSVK SVTVDDLKNLFIEAGC IEAGCSVKAFKFFQKD K N L V K A 1 0 1 0 1 0 1 1 0 1 1 1 0 1 0 1 0 0 0 1 0 11 0 1236.6173 O95758-1;O95758-6;O95758-2;O95758;O95758-5;O95758-4;B1ALY6 O95758-1 462 472 PTBP3 Polypyrimidine tract-binding protein 3 yes no 2 0.0060017 70.728 By matching By MS/MS By matching By matching By matching By matching 1 13007000 0 13007000 0 0 0 0 5520 774 5605 24622 16308 16308 1 NLFISCK LQKLASERNLFISCKS RNLFISCKSSHDRCLE R N L C K S 0 0 1 0 1 0 0 0 0 1 1 1 0 1 0 1 0 0 0 0 0 7 0 880.44767 P42166 P42166 275 281 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 1;2 0.024751 85.265 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 8384000 6838200 0 0 0 0 1545800 5521 913 5606 24623;24624 16309;16310 16309 2 NLGFTAIPLHGQMSQSK QRTALLLRNLGFTAIP HGQMSQSKRLGSLNKF R N L S K R 1 0 1 0 0 2 0 2 1 1 2 1 1 1 1 2 1 0 0 0 0 17 0 1827.9302 Q9H0S4 Q9H0S4 285 301 DDX47 Probable ATP-dependent RNA helicase DDX47 yes yes 2 0.0012462 65.949 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 5522 1481 5607 24625 16311 16311 1 NLGNIKVTK DILEEGEKNLGNIKVT LGNIKVTKMDANVLMH K N L T K M 0 0 2 0 0 0 0 1 0 1 1 2 0 0 0 0 1 0 0 1 0 9 1 985.59203 Q7Z2T5;Q7Z2T5-2 Q7Z2T5 347 355 TRMT1L TRMT1-like protein yes no 2 0.037231 78.098 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 4125800 520930 1056200 1290600 0 330900 927170 5523 1248 5608 24626;24627;24628;24629;24630 16312 16312 1 NLHHTQELLYESTK NKIKELTKNLHHTQEL ELLYESTKDFLQLRSE K N L T K D 0 0 1 0 0 1 2 0 2 0 3 1 0 0 0 1 2 0 1 0 0 14 0 1711.8529 F5H0W5;Q9BR77-2;Q9BR77 F5H0W5 242 255 CCDC77 Coiled-coil domain-containing protein 77 yes no 3 8.6489E-13 103.14 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 9703700 0 2026800 1912800 0 0 5764100 5524 506 5609 24631;24632;24633 16313;16314 16314 2 NLKLIEEK QELDEHEKNLKLIEEK NLKLIEEKLGMTPIRK K N L E K L 0 0 1 0 0 0 2 0 0 1 2 2 0 0 0 0 0 0 0 0 0 8 1 985.5808 A6NHR9 A6NHR9 1951 1958 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 2 3.4232E-07 117.81 By MS/MS By matching By matching By matching By matching By matching 1 0 0 0 0 0 0 0 5525 23 5610 24634 16315 16315 1 NLKRPIAHLPCPGK TTYVFSRKNLKRPIAH AHLPCPGKATLAVRCC K N L G K A 1 1 1 0 1 0 0 1 1 1 2 2 0 0 3 0 0 0 0 0 0 14 2 1599.9032 Q13112 Q13112 273 286 CHAF1B Chromatin assembly factor 1 subunit B yes yes 4 0.0031753 59.155 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 4283900 0 0 416810 0 1318600 2548500 5526 1069 5611 24635;24636;24637 16316;16317;16318 16318 3 NLLAQENVETQNLK ELLVLQRKNLLAQENV NVETQNLKLGSDMDHL K N L L K L 1 0 3 0 0 2 2 0 0 0 3 1 0 0 0 0 1 0 0 1 0 14 0 1612.842 C9JIX7;F5H549;Q9Y2D8-2;Q9Y2D8 C9JIX7 113 126 SSX2IP Afadin- and alpha-actinin-binding protein yes no 2 0.0011068 73.415 By matching By matching By matching By matching By matching By MS/MS 1 509680 0 0 0 0 0 509680 5527 250 5612 24638 16319 16319 1 NLLESLKGNRTENFTK KFAIETVKNLLESLKG NRTENFTKTSGKRTIS K N L T K T 0 1 3 0 0 0 2 1 0 0 3 2 0 1 0 1 2 0 0 0 0 16 2 1862.985 Q9NVV4;Q9NVV4-2 Q9NVV4 556 571 MTPAP Poly(A) RNA polymerase, mitochondrial yes no 3 0.0051844 77.746 By matching By matching By matching By matching By matching By MS/MS 1 32765000 0 0 0 0 0 32765000 5528 1551 5613 24639 16320 16320 1 NLLHSLQSSGIGSK AQPEATAKNLLHSLQS QSSGIGSKAGVPSKSS K N L S K A 0 0 1 0 0 1 0 2 1 1 3 1 0 0 0 4 0 0 0 0 0 14 0 1439.7732 Q92616 Q92616 88 101 GCN1L1 Translational activator GCN1 yes yes 3 0.0009228 71.529 By MS/MS By matching By matching By matching By matching By matching 1 2566500 2566500 0 0 0 0 0 5529 1355 5614 24640 16321 16321 1 NLLSLGHNNIVR DSRTAERRNLLSLGHN LGHNNIVRCIVHSPTN R N L V R C 0 1 3 0 0 0 0 1 1 1 3 0 0 0 0 1 0 0 0 1 0 12 0 1348.7575 Q05048 Q05048 390 401 CSTF1 Cleavage stimulation factor subunit 1 yes yes 3 9.518E-07 99.539 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 5530 1038 5615 24641 16322 16322 1 NLLTVTSSDEMMK SLGGQINKNLLTVTSS TSSDEMMKSYVAWDRE K N L M K S 0 0 1 1 0 0 1 0 0 0 2 1 2 0 0 2 2 0 0 1 0 13 0 1467.6949 P78527;E7EUY0;P78527-2 P78527 869 881 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.012803 52.966 By matching By matching By matching By MS/MS By matching By matching 1 22452000 0 0 0 22452000 0 0 5531 1012 5616 24642 16323 16323 1 NLNPNDSIVVNSCQMK SPGIVSTRNLNPNDSI VVNSCQMKFQLRCTPV R N L M K F 0 0 4 1 1 1 0 0 0 1 1 1 1 0 1 2 0 0 0 2 0 16 0 1831.8557 Q12789-3;Q12789;H7BYG6 Q12789-3 1661 1676 GTF3C1 General transcription factor 3C polypeptide 1 yes no 2 0.0031279 54.281 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 5646100 1578800 812190 0 0 0 3255200 5532 1059 5617 24643;24644;24645 16324;16325 16324 2 NLPDPGKAQDFVK GKLMTIAKNLPDPGKA GKAQDFVKKFNQVLGD K N L V K K 1 0 1 2 0 1 0 1 0 0 1 2 0 1 2 0 0 0 0 1 0 13 1 1427.7409 Q29RF7;Q29RF7-3 Q29RF7 545 557 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 2;3 0.0012007 80.871 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 45331000 7507400 2996200 16024000 8004800 1643600 9154900 5533 1159 5618 24646;24647;24648;24649;24650;24651;24652 16326;16327;16328;16329;16330;16331 16327 6 NLPFKTSGLETAKK VSDTQKLKNLPFKTSG SGLETAKKRNSISDDD K N L K K R 1 0 1 0 0 0 1 1 0 0 2 3 0 1 1 1 2 0 0 0 0 14 2 1532.8562 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;Q76FK4-3;F5GWN9 F5H101 280 293 NOL8 Nucleolar protein 8 yes no 3 0.0034575 71.879 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 4488200 853290 1404300 0 0 0 2230600 5534 27 5619 24653;24654;24655 16332;16333 16332 2 NLPLPPPPPPR GRGGSRARNLPLPPPP LPPPPPPRGGDLMAYD R N L P R G 0 1 1 0 0 0 0 0 0 0 2 0 0 0 7 0 0 0 0 0 0 11 0 1193.6921 P61978-3;P61978-2;B4DFF1;P61978;Q5T6W5;Q5T6W2;Q5T6W1 P61978-3 282 292 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 0.015836 68.847 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 7035400 0 1786700 0 431290 0 4817400 5535 984 5620 24656;24657;24658 16334;16335 16334 1 NLPLPPPPPPRGGDLMAYDRR GRGGSRARNLPLPPPP DLMAYDRRGRPGDRYD R N L R R G 1 3 1 2 0 0 0 2 0 0 3 0 1 0 7 0 0 0 1 0 0 21 2 2328.2161 P61978-3;P61978-2;B4DFF1;P61978;Q5T6W5;Q5T6W2;Q5T6W1 P61978-3 282 302 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 4 0.002058 49.425 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 128190000 0 0 35857000 35827000 18660000 37842000 5536 984 5621;5622 24659;24660;24661;24662 16336;16337;16338;16339 16337 116 4 NLPQYVSNELLEEAFSVFGQVER HSASLTVRNLPQYVSN SVFGQVERAVVIVDDR R N L E R A 1 1 2 0 0 2 4 1 0 0 3 0 0 2 1 2 0 0 1 3 0 23 0 2667.318 Q15233;F5GYZ3;C9IZL7 Q15233 154 176 NONO Non-POU domain-containing octamer-binding protein yes no 2;3 0 198.22 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 5 2 2 2 1896100000 0 921550000 523760000 241420000 0 209350000 5537 1133 5623 24663;24664;24665;24666;24667;24668;24669;24670;24671;24672;24673 16340;16341;16342;16343;16344;16345;16346;16347;16348;16349;16350 16343 11 NLPSSAQPFIPK TVSTIKGRNLPSSAQP SAQPFIPKSFNYSPNS R N L P K S 1 0 1 0 0 1 0 0 0 1 1 1 0 1 3 2 0 0 0 0 0 12 0 1297.703 Q5VT52-3;Q5VT52;B4E2Q6;Q5VT52-2 Q5VT52-3 551 562 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes no 2 0.0035654 69.229 By matching By MS/MS By matching By matching By matching By matching 1 1 9107600 0 7257100 0 1850500 0 0 5538 1202 5624 24674;24675 16351 16351 1 NLPYKVTQDELK DARTLLAKNLPYKVTQ KVTQDELKEVFEDAAE K N L L K E 0 0 1 1 0 1 1 0 0 0 2 2 0 0 1 0 1 0 1 1 0 12 1 1446.7718 E7EX81;P19338 E7EX81 291 302 NCL Nucleolin yes no 2;3 0.00049799 96.334 By MS/MS By MS/MS By matching By matching By matching By matching 2 2 1 2 10281000 3015100 3330000 0 0 1677200 2259200 5539 397 5625 24676;24677;24678;24679;24680;24681;24682 16352;16353;16354;16355 16355 3 NLQEGNEVDSQSSIR RTGMKEEKNLQEGNEV VDSQSSIRTEAKEASG K N L I R T 0 1 2 1 0 2 2 1 0 1 1 0 0 0 0 3 0 0 0 1 0 15 0 1674.7809 B4DLG2;O75152;E9PQ61 B4DLG2 468 482 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 0.00062919 81.526 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 5720900 0 1351500 902430 574610 1608200 1284100 5540 97 5626 24683;24684;24685;24686;24687 16356;16357;16358 16356 3 NLQEGNEVDSQSSIRTEAK RTGMKEEKNLQEGNEV SSIRTEAKEASGETTG K N L A K E 1 1 2 1 0 2 3 1 0 1 1 1 0 0 0 3 1 0 0 1 0 19 1 2104.0033 B4DLG2;O75152;E9PQ61 B4DLG2 468 486 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2;3 0.00042941 66.826 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 2 2 2 71301000 0 19351000 15083000 12692000 14077000 10099000 5541 97 5627 24688;24689;24690;24691;24692;24693;24694;24695 16359;16360;16361;16362 16362 4 NLQLALANSSR PLSEVIVKNLQLALAN LALANSSRNAVALSAS K N L S R N 2 1 2 0 0 1 0 0 0 0 3 0 0 0 0 2 0 0 0 0 0 11 0 1185.6466 Q92547 Q92547 870 880 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 2 0.0048669 63.091 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 23131000 1896200 3182900 0 1058300 0 16993000 5542 1351 5628 24696;24697;24698;24699 16363 16363 1 NLQLLVPK NFLGAETKNLQLLVPK NLQLLVPKTEICEEAE K N L P K T 0 0 1 0 0 1 0 0 0 0 3 1 0 0 1 0 0 0 0 1 0 8 0 923.5804 P13682;C9JGR2 P13682 118 125 ZNF35 Zinc finger protein 35 yes no 2 0.017128 82.241 By matching By MS/MS By matching By matching By matching By matching 1 11788000 0 11788000 0 0 0 0 5543 835 5629 24700 16364 16364 1 NLQLMEGKEPATGAK QMPVRHSRNLQLMEGK KEPATGAKKSNKPNEQ R N L A K K 2 0 1 0 0 1 2 2 0 0 2 2 1 0 1 0 1 0 0 0 0 15 1 1585.8134 E9PFZ0;P38398-4;P38398-2;P38398;E9PFC7;E7EP70;F8W8H7;E7EMP0 E9PFZ0 618 632 BRCA1 Breast cancer type 1 susceptibility protein yes no 2;3 0.0022871 70.197 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2 7209800 0 0 811110 213510 424310 5760800 5544 426 5630 24701;24702;24703;24704;24705 16365;16366;16367 16367 3 NLQSVVLSK ________________ LQSVVLSKMNFESFVK K N L S K M 0 0 1 0 0 1 0 0 0 0 2 1 0 0 0 2 0 0 0 2 0 9 0 986.57605 B4E2Z2;P43246;E9PHA6;E7EU21;E7EQQ1;C9J809 B4E2Z2 8 16 MSH2 DNA mismatch repair protein Msh2 yes no 2 0.0087373 86.898 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 38941000 2744400 10756000 5082900 3283000 623260 16452000 5545 162 5631 24706;24707;24708;24709;24710;24711 16368;16369;16370 16369 3 NLQYYDISAK SIVFHRKKNLQYYDIS QYYDISAKSNYNFEKP K N L A K S 1 0 1 1 0 1 0 0 0 1 1 1 0 0 0 1 0 0 2 0 0 10 0 1213.5979 P62826;B5MDF5;F5H018;B4DV51 P62826 143 152 RAN GTP-binding nuclear protein Ran yes no 2 0.0090532 76.927 By matching By MS/MS By matching By matching By matching By matching 1 1 1 7289700 1348900 4840500 0 0 1100300 0 5546 173 5632 24712;24713;24714 16371 16371 1 NLSESPVITKAK KTSTNSSKNLSESPVI SPVITKAKEGCQSDSM K N L A K E 1 0 1 0 0 0 1 0 0 1 1 2 0 0 1 2 1 0 0 1 0 12 1 1285.7242 Q12830-4;Q12830-2;Q12830 Q12830-4 1227 1238 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 0.028853 58.04 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 4915000 595650 0 1716500 695470 638080 1269200 5547 1061 5633 24715;24716;24717;24718;24719 16372 16372 1 NLSGWWYIQIEDK LKVEVIEKNLSGWWYI WYIQIEDKEGWAPATF K N L D K E 0 0 1 1 0 1 1 1 0 2 1 1 0 0 0 1 0 2 1 0 0 13 0 1650.8042 A1X283 A1X283 401 413 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 2 0.028618 59.796 By matching By matching By MS/MS By matching By matching By matching 1 8079000 0 0 8079000 0 0 0 5548 2 5634 24720 16373 16373 0 NLSNPEMTSGSDK KLTATIWKNLSNPEMT EMTSGSDKINYTYMLT K N L D K I 0 0 2 1 0 0 1 1 0 0 1 1 1 0 1 3 1 0 0 0 0 13 0 1378.6035 O15226;G3V1N1 O15226 184 196 NKRF NF-kappa-B-repressing factor yes no 2 0.021384 47.712 By matching By matching By matching By matching By matching By MS/MS 1 270120 0 0 0 0 0 270120 5549 578 5635 24721 16374 16374 1 NLTHMQDEVNVK SVNAKDVRNLTHMQDE MQDEVNVKSHQREHQN R N L V K S 0 0 2 1 0 1 1 0 1 0 1 1 1 0 0 0 1 0 0 2 0 12 0 1426.6875 F5H2B9;H0YNH8;G3XAG2;Q9BZF9;Q8NDD7;H0YN48;Q96NH6 F5H2B9 167 178 UACA;DKFZp564M063 Uveal autoantigen with coiled-coil domains and ankyrin repeats yes no 3 0.0032291 67.252 By matching By matching By matching By matching By matching By MS/MS 1 1 2089900 0 0 0 0 693320 1396600 5550 512 5636 24722;24723 16375 16375 1 NLTYSCRSNQDCIINK FFKRSVRKNLTYSCRS NQDCIINKHHRNRCQF K N L N K H 0 1 3 1 2 1 0 0 0 2 1 1 0 0 0 2 1 0 1 0 0 16 1 1984.9095 C9JKS0;P49116;P49116-2 C9JKS0 167 182 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes no 3 0.0034344 53.377 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 7168200 3847900 0 896450 1340500 1083300 0 5551 256 5637 24724;24725;24726;24727 16376;16377 16377 2 NLVDNVAK LGQINIAKNLVDNVAK NLVDNVAKDYVRLMKY K N L A K D 1 0 2 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 2 0 8 0 871.47633 Q9BZE4;B7Z7A3;Q5T3R7 Q9BZE4 104 111 GTPBP4 Nucleolar GTP-binding protein 1 yes no 2 0.029415 71.379 By matching By matching By matching By matching By MS/MS By matching 1 1 1 3775900 0 0 1051900 0 1338000 1386000 5552 1471 5638 24728;24729;24730 16378 16378 1 NLVPGESVYGEK KEDALVTKNLVPGESV GESVYGEKRVSISEGD K N L E K R 0 0 1 0 0 0 2 2 0 0 1 1 0 0 1 1 0 0 1 2 0 12 0 1290.6456 P22087 P22087 110 121 FBL rRNA 2-O-methyltransferase fibrillarin yes yes 2 0.0018256 89.43 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 74156000 10149000 7743100 7070400 7883300 21888000 19422000 5553 862 5639 24731;24732;24733;24734;24735;24736 16379;16380;16381;16382 16380 4 NLWVSGLSSTTRATDLK RVGSGSGRNLWVSGLS TTRATDLKNLFSKYGK R N L L K N 1 1 1 1 0 0 0 1 0 0 3 1 0 0 0 3 3 1 0 1 0 17 1 1847.9741 Q14151;A8MXT5;C9JPX0;F5GXS4 Q14151 408 424 SAFB2 Scaffold attachment factor B2 yes no 3 0.0018446 57.288 By matching By matching By matching By matching By matching By MS/MS 1 13812000 0 0 0 0 0 13812000 5554 1097 5640 24737 16383 16383 1 NMAINPSKENLCSTFCK QETYKQEKNMAINPSK NLCSTFCKEVVRNANE K N M C K E 1 0 3 0 2 0 1 0 0 1 1 2 1 1 1 2 1 0 0 0 0 17 1 2012.9118 CON__P02663 CON__P02663 25 41 yes yes 2;3 1.7643E-271 177.04 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 3 1 3 2 4 368660000 8263300 63672000 85601000 62281000 22845000 126000000 + 5555 289 5641;5642 24738;24739;24740;24741;24742;24743;24744;24745;24746;24747;24748;24749;24750;24751 16384;16385;16386;16387;16388;16389;16390;16391;16392;16393;16394;16395;16396;16397 16394 23 12 NMAQVTKALDK VTMKGVTKNMAQVTKA QVTKALDKALSTMDLQ K N M D K A 2 0 1 1 0 1 0 0 0 0 1 2 1 0 0 0 1 0 0 1 0 11 1 1217.6438 F8VUA2;Q9HD42;F8VVT7;F5H875 F8VUA2 88 98 CHMP1A Charged multivesicular body protein 1a yes no 3 0.0041313 79.036 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 7855100 851940 1431700 2077500 1928400 253420 1312200 5556 541 5643 24752;24753;24754;24755;24756;24757 16398;16399 16398 2 NMGGPYGGGNYGPGGSGGSGGYGGR SGNFGGSRNMGGPYGG GSGGYGGRSRY_____ R N M G R S 0 1 2 0 0 0 0 14 0 0 0 0 1 0 2 2 0 0 3 0 0 25 0 2188.8981 P22626;P22626-2 P22626 326 350 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 2;3 0.0079117 37.13 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 1 1 1 13848000 0 6033500 1319000 830630 1801200 3863500 5557 863 5644 24758;24759;24760;24761;24762;24763 16400;16401;16402 16400 3 NMMAACDPRHGR TQQMFDAKNMMAACDP ACDPRHGRYLTVAAVF K N M G R Y 2 2 1 1 1 0 0 1 1 0 0 0 2 0 1 0 0 0 0 0 0 12 1 1414.6016 P68371;E7EWR1;Q5ST81;F5H8C9;Q9BVA1;Q13885;F5H894;B4DFH6;B4DJ43;P04350;F5H0I4;A8K854;C9JAA5;Q5SQY0;Q3ZCM7;Q13509;B3KS31;F8VUJ7;Q5JP53;F8VYX6;F8VW92;P07437 P68371 298 309 TUBB4B;TUBB;TUBB2B;TUBB2A;TUBB4A;TUBB8;TUBB3;TUBB6 Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4A chain;Tubulin beta-8 chain;Tubulin beta-3 chain;Tubulin beta chain no no 3 0.00747 61.815 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 6026500 316570 838090 0 617540 163150 4091200 5558 1007;542 5645 24764;24765;24766;24767;24768 16403;16404 16403 2 NNAFPCQVNIKQK VTSKLDEKNNAFPCQV CQVNIKQKMQELNNEI K N N Q K M 1 0 3 0 1 2 0 0 0 1 0 2 0 1 1 0 0 0 0 1 0 13 1 1559.7878 Q9NQW6;Q9NQW6-2;H7C1K5 Q9NQW6 707 719 ANLN Actin-binding protein anillin yes no 2;3 2.5747E-24 117.25 By matching By MS/MS By matching By matching By MS/MS By MS/MS 2 1 1 2 3 2 45154000 2956000 12065000 3172800 2814300 10097000 14050000 5559 1533 5646 24769;24770;24771;24772;24773;24774;24775;24776;24777;24778;24779 16405;16406;16407;16408;16409 16406 5 NNASTDYDLSDK IKDGKLIKNNASTDYD TDYDLSDKSINPLGGF K N N D K S 1 0 2 3 0 0 0 0 0 0 1 1 0 0 0 2 1 0 1 0 0 12 0 1341.5685 P39023;G5E9G0;B5MCW2 P39023 301 312 RPL3 60S ribosomal protein L3 yes no 2 0.023949 50.222 By matching By matching By matching By matching By MS/MS By matching 1 1 1 2567600 0 400350 0 0 1067800 1099400 5560 905 5647 24780;24781;24782 16410 16410 1 NNFCGVGICYGSMNRQGPESR YWEVELQKNNFCGVGI NRQGPESRLGRNSASW K N N S R L 0 2 3 0 2 1 1 4 0 1 0 0 1 1 1 2 0 0 1 1 0 21 1 2402.0314 Q14258 Q14258 521 541 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 3 0.016822 37.687 By matching By MS/MS By matching By matching By matching By matching 1 792800 0 792800 0 0 0 0 5561 1105 5648 24783 16411 16411 1 NNLEPILEGYISNLRK QLDLNNCKNNLEPILE GYISNLRKQLETLSGD K N N R K Q 0 1 3 0 0 0 2 1 0 2 3 1 0 0 1 1 0 0 1 0 0 16 1 1872.0105 Q86Y46;CON__Q32MB2;Q86Y46-2;Q3SY84;CON__Q3SY84 Q86Y46 177 192 KRT73;KRT71 Keratin, type II cytoskeletal 73;Keratin, type II cytoskeletal 71 yes no 4 0.0044303 51.939 By matching By matching By matching By MS/MS By matching By matching 1 8060500 0 0 0 8060500 0 0 + 5562 305 5649 24784 16412 16412 0 NNLLNTKLEK DSENNLLKNNLLNTKL LLNTKLEKSLEEKNES K N N E K S 0 0 3 0 0 0 1 0 0 0 3 2 0 0 0 0 1 0 0 0 0 10 1 1185.6717 Q99590-2;F8VXG7;Q99590;F8W028 Q99590-2 355 364 SCAF11 Protein SCAF11 yes no 2 0.021917 82.831 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 8284500 1777400 0 1227600 986890 1531600 2760900 5563 547 5650 24785;24786;24787;24788;24789 16413 16413 1 NNPDIPELHRPVVK IKTSSLFKNNPDIPEL ELHRPVVKQVQEKVFT K N N V K Q 0 1 2 1 0 0 1 0 1 1 1 1 0 0 3 0 0 0 0 2 0 14 1 1626.8842 F8WAJ0;Q9H8H2;Q9H8H2-2;B4E3G7;Q9H8H2-3;Q9H8H2-4 F8WAJ0 78 91 DDX31 Probable ATP-dependent RNA helicase DDX31 yes no 3 0.040471 39.394 By matching By matching By matching By MS/MS By matching By matching 1 1 1 6544200 0 0 0 905000 3009900 2629400 5564 565 5651 24790;24791;24792 16414 16414 1 NNPHYDPSSKEDNPK PDHTQFEKNNPHYDPS SSKEDNPKWSMVDVQF K N N P K W 0 0 3 2 0 0 1 0 1 0 0 2 0 0 3 2 0 0 1 0 0 15 1 1740.7703 Q9P016;Q9P016-2 Q9P016 143 157 THYN1 Thymocyte nuclear protein 1 yes no 3;4 0.0042889 54.812 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 2 1 1 8871700 1232700 0 5302900 745600 0 1590500 5565 1570 5652 24793;24794;24795;24796;24797 16415;16416;16417;16418;16419 16415 5 NNRFSTPEQAAK YKDFSESRNNRFSTPE STPEQAAKNRIQHPSN R N N A K N 2 1 2 0 0 1 1 0 0 0 0 1 0 1 1 1 1 0 0 0 0 12 1 1361.6688 P14866;A6NIT8 P14866 482 493 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 3 0.002483 74.611 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 35179000 4871400 10315000 7299400 4046300 8647700 0 5566 838 5653 24798;24799;24800;24801;24802 16420;16421;16422 16421 3 NNRFSTPEQAAKNR YKDFSESRNNRFSTPE PEQAAKNRIQHPSNVL R N N N R I 2 2 3 0 0 1 1 0 0 0 0 1 0 1 1 1 1 0 0 0 0 14 2 1631.8128 P14866;A6NIT8 P14866 482 495 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 3;4 0.0019795 81.789 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 2 2 2 12484000 844570 6381400 1829800 1822000 0 1606300 5567 838 5654 24803;24804;24805;24806;24807;24808;24809;24810;24811 16423;16424;16425 16424 3 NNRQPYAVSELAGHQTSAESWGTGR FVHTNLRKNNRQPYAV AESWGTGRAVARIPRV K N N G R A 3 2 2 0 0 2 2 3 1 0 1 0 0 0 1 3 2 1 1 1 0 25 1 2715.275 E7EWF1;P36578;H3BU31;B4DP82;H3BTP7 E7EWF1 47 71 RPL4 60S ribosomal protein L4 yes no 4 3.3744E-65 112.47 By matching By matching By matching By matching By matching By MS/MS 1 1 13451000 0 1432900 0 0 0 12018000 5568 392 5655 24812;24813 16426 16426 1 NNSFTAPSTVGK TLQNHYYRNNSFTAPS TAPSTVGKRNLSPSQE R N N G K R 1 0 2 0 0 0 0 1 0 0 0 1 0 1 1 2 2 0 0 1 0 12 0 1221.599 O95453-2;O95453-3;O95453;B4DSB0 O95453-2 494 505 PARN Poly(A)-specific ribonuclease PARN yes no 2 0.020831 51.612 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4757700 0 817820 1102100 0 751950 2085800 5569 772 5656 24814;24815;24816;24817 16427 16427 1 NNTLTLPEELSKDK DCQTSFQKNNTLTLPE PEELSKDKSENALSGG K N N D K S 0 0 2 1 0 0 2 0 0 0 3 2 0 0 1 1 2 0 0 0 0 14 1 1600.8308 Q9H582-2;Q9H582;F5H7T9 Q9H582-2 69 82 ZNF644 Zinc finger protein 644 yes no 3 0.0046584 65.219 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 17429000 0 0 7243700 0 0 10186000 5570 1492 5657 24818;24819 16428;16429 16429 1 NNWEVSALSR SALSDETKNNWEVSAL WEVSALSRAAQKGFNK K N N S R A 1 1 2 0 0 0 1 0 0 0 1 0 0 0 0 2 0 1 0 1 0 10 0 1174.5731 P78527;E7EUY0;P78527-2 P78527 811 820 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.0026422 100.69 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 12181000 0 2681200 0 0 0 9500000 5571 1012 5658 24820;24821 16430;16431 16431 2 NPNGPYPYTLK FLNHYQMKNPNGPYPY GPYPYTLKLCFSTAQH K N P L K L 0 0 2 0 0 0 0 1 0 0 1 1 0 0 3 0 1 0 2 0 0 11 0 1262.6295 P14866;A6NIT8 P14866 569 579 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 2 0.0013333 92.112 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 15448000 1770500 3335700 2028800 1447500 1193100 5671800 5572 838 5659 24822;24823;24824;24825;24826;24827 16432;16433;16434 16432 3 NQAAIQGRPPYAASAEEVAK RYYGRGYKNQAAIQGR ASAEEVAKELKSKSGE K N Q A K E 6 1 1 0 0 2 2 1 0 1 0 1 0 0 2 1 0 0 1 1 0 20 1 2070.0494 Q9NZB2;Q9NZB2-6;Q9NZB2-4 Q9NZB2 1010 1029 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 3 0.00056812 57.936 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 12710000 2598500 2027300 2105300 718580 1653400 3607200 5573 1566 5660 24828;24829;24830;24831;24832;24833 16435;16436;16437 16435 3 NQAIRQPEVQAAPKEK QHVLFLSKNQAIRQPE VQAAPKEKSEQKKAKK K N Q E K S 3 1 1 0 0 3 2 0 0 1 0 2 0 0 2 0 0 0 0 1 0 16 2 1805.9748 Q6PK04;I3L0U5 Q6PK04 142 157 CCDC137 Coiled-coil domain-containing protein 137 yes no 3 6.8435E-22 102.15 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 19537000 3731900 1956900 2674500 2506700 6349300 2318000 5574 679 5661 24834;24835;24836;24837;24838;24839 16438;16439;16440;16441 16441 2 NQCLFTNTQCK EVEHMIQKNQCLFTNT LFTNTQCKVCCALLIS K N Q C K V 0 0 2 0 2 2 0 0 0 0 1 1 0 1 0 0 2 0 0 0 0 11 0 1412.6177 B7Z367;Q9UL40;D6RJ07;Q9UL40-2;B7Z6B6;B7Z6Q2 B7Z367 66 76 ZNF346 Zinc finger protein 346 yes no 2 0.0018545 90.05 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 1 1 1 1 1 12009000 2039700 958270 1470200 986370 2457400 4097000 5575 184 5662 24840;24841;24842;24843;24844;24845;24846 16442;16443;16444;16445;16446 16443 5 NQCTQVVQER SNRIQESKNQCTQVVQ CTQVVQERESLLVKIK K N Q E R E 0 1 1 0 1 3 1 0 0 0 0 0 0 0 0 0 1 0 0 2 0 10 0 1260.5881 P15924;P15924-2 P15924 1803 1812 DSP Desmoplakin yes no 2 0.01091 72.096 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 3849200 605700 0 1806500 713450 723530 0 5576 840 5663 24847;24848;24849;24850 16447;16448;16449 16449 3 NQDVSISNVQPK VKNRLLVKNQDVSISN SISNVQPKTSNFVPSS K N Q P K T 0 0 2 1 0 2 0 0 0 1 0 1 0 0 1 2 0 0 0 2 0 12 0 1327.6732 H0Y3K4;Q96EV2 H0Y3K4 650 661 RBM33 RNA-binding protein 33 yes no 2 0.0018734 89.43 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 14733000 842380 3070600 1833600 1221000 2826500 4938900 5577 607 5664 24851;24852;24853;24854;24855;24856 16450;16451;16452;16453;16454 16450 5 NQEEYKEVNFTSELR ERIKQHPKNQEEYKEV VNFTSELRKHPSSPAR K N Q L R K 0 1 2 0 0 1 4 0 0 0 1 1 0 1 0 1 1 0 1 1 0 15 1 1884.8854 Q9ULW0;Q96RR5 Q9ULW0 274 288 TPX2;HCA90 Targeting protein for Xklp2 yes no 3 1.1823E-14 104.09 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 6606200 0 5555200 0 1051000 0 0 5578 1611 5665 24857;24858 16455;16456 16456 1 NQENGPVCSLR QFRSKRSKNQENGPVC NGPVCSLRDCLRSFTD K N Q L R D 0 1 2 0 1 1 1 1 0 0 1 0 0 0 1 1 0 0 0 1 0 11 0 1272.5881 Q6JHV3;H0YMI4;Q9Y6I4;B3KMX7;H0YLB7;H0YKU8;F5H1A6;B4DWJ6 Q6JHV3 333 343 USP3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 2 0.0016364 90.913 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 5671700 0 1571500 0 782610 0 3317600 5579 628 5666 24859;24860;24861;24862 16457;16458;16459 16459 3 NQENGPVCSLRDCLR QFRSKRSKNQENGPVC CSLRDCLRSFTDLEEL K N Q L R S 0 2 2 1 2 1 1 1 0 0 2 0 0 0 1 1 0 0 0 1 0 15 1 1816.8308 Q6JHV3;H0YMI4;Q9Y6I4;B3KMX7;H0YLB7;H0YKU8;F5H1A6;B4DWJ6 Q6JHV3 333 347 USP3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 3 0.020617 60.157 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2 1 2 53893000 8800400 7443800 4714900 4941300 5423600 22568000 5580 628 5667 24863;24864;24865;24866;24867;24868;24869;24870 16460;16461 16460 1 NQGGYGGSSSSSSYGSGRRF GQYFAKPRNQGGYGGS SYGSGRRF________ R N Q R F - 0 2 1 0 0 1 0 6 0 0 0 0 0 1 0 7 0 0 2 0 0 20 2 1996.8623 H0YH80;P09651-3;F8VXY0;F8VRQ1;P09651-2;F8W6I7;P09651 H0YH80 172 191 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1 yes no 3 0.0060745 50.966 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 25336000 3153300 4786200 2194800 2966900 6060100 6175100 5581 537 5668 24871;24872;24873;24874;24875;24876 16462 16462 1 NQHLVSQQKDPDTEEYRK DVKRWKARNQHLVSQQ PDTEEYRKLLSEKEVH R N Q R K L 0 1 1 2 0 3 2 0 1 0 1 2 0 0 1 1 1 0 1 1 0 18 2 2214.0665 P12270 P12270 1339 1356 TPR Nucleoprotein TPR yes yes 4 0.0016142 64.454 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 7456800 2311600 1181500 0 1034300 1435700 1493700 5582 827 5669 24877;24878;24879;24880;24881;24882 16463;16464;16465;16466;16467;16468 16465 6 NQIQDQEQLVSK DEEISRLKNQIQDQEQ DQEQLVSKLSQVEGEH K N Q S K L 0 0 1 1 0 4 1 0 0 1 1 1 0 0 0 1 0 0 0 1 0 12 0 1428.7209 P49454 P49454 2625 2636 CENPF Centromere protein F yes yes 2 0.0034658 69.864 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2160200 0 933510 316150 0 0 910510 5583 936 5670 24883;24884;24885 16469;16470 16470 2 NQKPSQVNGAPGSPTEPAGQK KSPKLQKKNQKPSQVN PTEPAGQKQHQKALPK K N Q Q K Q 2 0 2 0 0 3 1 3 0 0 0 2 0 0 4 2 1 0 0 1 0 21 1 2091.0345 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 1175 1195 MYBBP1A Myb-binding protein 1A yes no 3 0.0017708 50.956 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 6943500 599960 1644500 655380 589580 1617100 1836900 5584 682 5671 24886;24887;24888;24889;24890;24891;24892 16471;16472;16473;16474;16475;16476;16477 16475 7 NQKPSQVNGAPGSPTEPAGQKQHQK KSPKLQKKNQKPSQVN AGQKQHQKALPKKGVL K N Q Q K A 2 0 2 0 0 5 1 3 1 0 0 3 0 0 4 2 1 0 0 1 0 25 2 2612.3055 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 1175 1199 MYBBP1A Myb-binding protein 1A yes no 4 0.0023295 42.289 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 7538200 1447600 0 2517700 1244600 896000 1432300 5585 682 5672 24893;24894;24895;24896;24897 16478;16479;16480;16481;16482 16482 5 NQLETAPPHELK FTMLHFIKNQLETAPP TAPPHELKNTFQLLHE K N Q L K N 1 0 1 0 0 1 2 0 1 0 2 1 0 0 2 0 1 0 0 0 0 12 0 1375.7096 B7WPF4;Q9UPU5 B7WPF4 2279 2290 USP24 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 24 yes no 3 0.013368 54.005 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5413300 1250500 1461100 0 0 0 2701700 5586 180 5673 24898;24899;24900 16483 16483 1 NQLRNNIRQQVLK TWSPHLNKNQLRNNIR NIRQQVLKSGMLESGI K N Q L K S 0 2 3 0 0 3 0 0 0 1 2 1 0 0 0 0 0 0 0 1 0 13 2 1622.9329 Q8NFC6 Q8NFC6 111 123 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 4 0.02425 45.653 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3895600 0 920670 0 0 1012300 1962700 5587 1325 5674 24901;24902;24903 16484 16484 1 NQLSQNRGLGGIMVK GTKTPINRNQLSQNRG GLGGIMVKRAYETMAG R N Q V K R 0 1 2 0 0 2 0 3 0 1 2 1 1 0 0 1 0 0 0 1 0 15 1 1613.8672 O94776;Q68DB1 O94776 545 559 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 3 0.0025132 60.364 By matching By matching By matching By matching By matching By MS/MS 1 1 1 15995000 0 3236400 6220500 0 0 6538200 5588 754 5675 24904;24905;24906 16485 16485 1 NQLTSNPENTVFDAK RLIGDAAKNQLTSNPE ENTVFDAKRLIGRTWN K N Q A K R 1 0 3 1 0 1 1 0 0 0 1 1 0 1 1 1 2 0 0 1 0 15 0 1676.8006 P11021;B4DEF7 P11021 82 96 HSPA5 78 kDa glucose-regulated protein yes no 2 7.7692E-230 177.63 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 88410000 34387000 8032800 26036000 3992100 8379900 7582200 5589 823 5676 24907;24908;24909;24910;24911;24912 16486;16487;16488;16489;16490;16491 16491 6 NQLVTPEPTSR ELQPSTSRNQLVTPEP VTPEPTSRATRCRTNR R N Q S R A 0 1 1 0 0 1 1 0 0 0 1 0 0 0 2 1 2 0 0 1 0 11 0 1240.6412 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7 Q14676 1585 1595 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 2 0.036415 49.448 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 6075100 0 1230500 770430 370900 1797200 1906100 5590 1109 5677 24913;24914;24915;24916;24917 16492 16492 1 NQMLIEEEVQKLK AIQSEVAKNQMLIEEE EEEVQKLKRYKIENIR K N Q L K R 0 0 1 0 0 2 3 0 0 1 2 2 1 0 0 0 0 0 0 1 0 13 1 1600.8494 H0Y4K0;H0Y636;H0Y4E0;B4DW59;B7Z9U9;H0Y6Y4;Q9Y5K5-2;E9PGR0;Q9Y5K5-4;Q9Y5K5-3;Q9Y5K5;Q5LJA5;Q5LJA9 H0Y4K0 49 61 UCHL5 Ubiquitin carboxyl-terminal hydrolase isozyme L5 yes no 3 0.0038454 85.672 By matching By matching By matching By matching By MS/MS By matching 1 2038000 0 0 0 0 2038000 0 5591 135 5678 24918 16493 16493 0 NQMLMTPTSAPR TFLHTVQRNQMLMTPT MTPTSAPRSVMKSFIK R N Q P R S 1 1 1 0 0 1 0 0 0 0 1 0 2 0 2 1 2 0 0 0 0 12 0 1345.6482 Q9NQS7-2;Q9NQS7 Q9NQS7-2 502 513 INCENP Inner centromere protein yes no 2 0.034746 46.069 By matching By matching By matching By matching By matching By MS/MS 1 629190 0 0 0 0 0 629190 5592 1531 5679 24919 16494 16494 1 NQQLDLCK AKWRKRERNQQLDLCK NQQLDLCKGGYVPQFS R N Q C K G 0 0 1 1 1 2 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 8 0 1017.4913 P78337;H0YJC8 P78337 150 157 PITX1 Pituitary homeobox 1 yes no 2 0.015503 84.743 By matching By matching By matching By matching By matching By MS/MS 1 1 1278000 0 495710 0 0 0 782330 5593 1008 5680 24920;24921 16495 16495 1 NQQTLGSYECGICGK CVVIGGVRNQQTLGSY YECGICGKKYKYYNCF R N Q G K K 0 0 1 0 2 2 1 3 0 1 1 1 0 0 0 1 1 0 1 0 0 15 0 1713.7451 Q5T7W0-2;B1ALC2;B5MDS3;Q5T7W0-3 Q5T7W0-2 108 122 ZNF618 Zinc finger protein 618 yes no 2 0.00067556 80.632 By matching By matching By matching By matching By matching By MS/MS 1 1 1736400 0 474750 0 0 0 1261600 5594 1195 5681 24922;24923 16496 16496 1 NQSFASTHLNQNSSR KLLKVGRKNQSFASTH HLNQNSSRSHSIFSIR K N Q S R S 1 1 3 0 0 2 0 0 1 0 1 0 0 1 0 4 1 0 0 0 0 15 0 1689.7819 O95235;B4DL79 O95235 365 379 KIF20A Kinesin-like protein KIF20A yes no 3 1.6246E-05 89.911 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 6120100 0 918830 556170 559600 1406100 2679400 5595 767 5682 24924;24925;24926;24927;24928 16497;16498;16499 16498 3 NQSLEGDTTKGTSEMSEK APAEVAAKNQSLEGDT GTSEMSEKRGPTSSNP K N Q E K R 0 0 1 1 0 1 3 2 0 0 1 2 1 0 0 3 3 0 0 0 0 18 1 1940.8633 H0Y818;P40692;H0Y3I0;E9PCU2;B7Z821;B4DI13 H0Y818 436 453 MLH1 DNA mismatch repair protein Mlh1 yes no 3 0.0016149 58.461 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 15118000 1493400 1578100 2700100 2052100 3588700 3705500 5596 614 5683 24929;24930;24931;24932;24933;24934 16500;16501;16502;16503 16501 4 NQSLVEENEK NLQSLMEKNQSLVEEN SLVEENEKLSRGLSEA K N Q E K L 0 0 2 0 0 1 3 0 0 0 1 1 0 0 0 1 0 0 0 1 0 10 0 1188.5622 O95239;O95239-2;Q2VIQ3 O95239 392 401 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 2 0.010869 72.2 By matching By matching By MS/MS By matching By matching By matching 1 2534900 0 0 2534900 0 0 0 5597 768 5684 24935 16504 16504 1 NQTSLLGEPPKEIR ISSGAASKNQTSLLGE GEPPKEIRLSKNPYLN K N Q I R L 0 1 1 0 0 1 2 1 0 1 2 1 0 0 2 1 1 0 0 0 0 14 1 1580.8522 Q9HCJ3-2;Q9HCJ3 Q9HCJ3-2 552 565 RAVER2 Ribonucleoprotein PTB-binding 2 yes no 3 0.013886 48.214 By matching By matching By matching By matching By matching By MS/MS 1 1882200 0 0 0 0 0 1882200 5598 1522 5685 24936 16505 16505 1 NQVALNPQNTVFDAK RLIGDAAKNQVALNPQ QNTVFDAKRLIGRKFG K N Q A K R 2 0 3 1 0 2 0 0 0 0 1 1 0 1 1 0 1 0 0 2 0 15 0 1657.8424 P08107;H0YG33 P08107 57 71 HSPA1A Heat shock 70 kDa protein 1A/1B yes no 2 1.0787E-295 185.32 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 126390000 31548000 0 45012000 0 9002400 40827000 5599 619 5686 24937;24938;24939;24940 16506;16507;16508 16506 3 NQVAMNPTNTVFDAK RLIGDAAKNQVAMNPT TNTVFDAKRLIGRRFD K N Q A K R 2 0 3 1 0 1 0 0 0 0 0 1 1 1 1 0 2 0 0 2 0 15 0 1648.7879 P11142;E9PKE3;P11142-2;E9PNE6;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 P11142 57 71 HSPA8 Heat shock cognate 71 kDa protein yes no 2 0 191.06 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 243640000 44339000 30985000 53552000 17872000 16966000 79923000 5600 824 5687;5688 24941;24942;24943;24944;24945;24946;24947;24948;24949;24950;24951;24952 16509;16510;16511;16512;16513;16514;16515;16516 16511 82 7 NQVAMNPTNTVFDAKR RLIGDAAKNQVAMNPT NTVFDAKRLIGRRFDD K N Q K R L 2 1 3 1 0 1 0 0 0 0 0 1 1 1 1 0 2 0 0 2 0 16 1 1804.889 P11142;E9PKE3;P11142-2;E9PNE6;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 P11142 57 72 HSPA8 Heat shock cognate 71 kDa protein yes no 3 0.0062024 44.252 By matching By matching By matching By matching By matching By MS/MS 1 2356400 0 0 0 0 0 2356400 5601 824 5689 24953 16517 16517 1 NQVDSETHCHAER SWKTGVFRNQVDSETH ETHCHAERCFLSWFCD R N Q E R C 1 1 1 1 1 1 2 0 2 0 0 0 0 0 0 1 1 0 0 1 0 13 0 1581.659 Q9NRW3 Q9NRW3 57 69 APOBEC3C DNA dC->dU-editing enzyme APOBEC-3C yes yes 3 0.01316 51.135 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 10411000 336470 6546400 1871600 0 363210 1293700 5602 1537 5690 24954;24955;24956;24957;24958 16518;16519 16519 2 NRAAAMANNLQK VQASQAEKNRAAAMAN AMANNLQKGSAGPMRL K N R Q K G 4 1 3 0 0 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 12 1 1300.667 H0Y4X3;E1P5S2;G3XAC6;Q14498-3;Q14498-2;Q14498 H0Y4X3 106 117 RBM39 RNA-binding protein 39 yes no 2;3 2.2226E-11 107.11 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 1 1 2 2 20489000 551180 3012300 1315400 993420 5215200 9401300 5603 334 5691 24959;24960;24961;24962;24963;24964;24965;24966;24967 16520;16521;16522;16523;16524;16525 16522 6 NREEFEDQSLEK NDSKDAEKNREEFEDQ FEDQSLEKDSDDKTPD K N R E K D 0 1 1 1 0 1 4 0 0 0 1 1 0 1 0 1 0 0 0 0 0 12 1 1522.69 Q12830-4;Q12830-2;Q12830;F5GXF5;F5H176 Q12830-4 593 604 BPTF Nucleosome-remodeling factor subunit BPTF yes no 3 0.0036668 69.03 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 3685300 464020 1078000 981370 0 0 1162000 5604 1061 5692 24968;24969;24970;24971 16526;16527;16528 16528 3 NREELGFRPEYSASQLK YHPGCFVKNREELGFR EYSASQLKGFSLLATE K N R L K G 1 2 1 0 0 1 3 1 0 0 2 1 0 1 1 2 0 0 1 0 0 17 2 2023.0123 P09874;F8WC10 P09874 166 182 PARP1 Poly [ADP-ribose] polymerase 1 yes no 3;4 0.0015689 79.337 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 2 2 2 2 2 2 86889000 15027000 13545000 20084000 5144600 9264000 23825000 5605 815 5693 24972;24973;24974;24975;24976;24977;24978;24979;24980;24981;24982;24983 16529;16530;16531;16532;16533;16534 16530 6 NRENCELSDHCIK STKKTSFKNRENCELS ELSDHCIKLQKRKSNV K N R I K L 0 1 2 1 2 0 2 0 1 1 1 1 0 0 0 1 0 0 0 0 0 13 1 1673.725 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;Q76FK4-3 F5H101 414 426 NOL8 Nucleolar protein 8 yes no 3 0.0022755 69.345 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 4087000 452530 768500 0 440690 981070 1444200 5606 27 5694 24984;24985;24986;24987;24988 16535 16535 1 NRGFCFLEYEDHK HQPDDKKKNRGFCFLE FLEYEDHKTAAQVKVL K N R H K T 0 1 1 1 1 0 2 1 1 0 1 1 0 2 0 0 0 0 1 0 0 13 1 1713.7569 O43390;O43390-2;E7ETM7;Q2L7G6;O60506-2;O60506;O60506-4;O60506-3;O60506-5 O60506-2 285 297 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 3 0.0052067 61.167 By matching By matching By matching By matching By MS/MS By matching 1 1442200 0 0 0 0 1442200 0 5607 731;715 5695 24989 16536 16536 1 NRNAAFGQSGGAGSDSNSPGNVQPNSAPSVESHPVLEK QTRWVAPRNRNAAFGQ ESHPVLEKLKAAHSYN R N R E K L 4 1 5 1 0 2 2 5 1 0 1 1 0 1 4 7 0 0 0 3 0 38 1 3762.7582 F8W840;Q9BYJ9;Q9BYJ9-2;C9J8M5 F8W840 283 320 YTHDF1 YTH domain family protein 1 yes no 4 0.00057129 23.79 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 11258000 0 1087200 0 5217100 2821900 2131700 5608 559 5696 24990;24991;24992;24993 16537;16538 16538 2 NRPDYVSEEEEDDEDFETAVK PPTFFCYKNRPDYVSE EDFETAVKKLNGKLYL K N R V K K 1 1 1 4 0 0 6 0 0 0 0 1 0 1 1 1 1 0 1 2 0 21 1 2515.0511 P49792;E9PGT0 P49792 2662 2682 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 3 0.00060329 55.209 By matching By MS/MS By matching By matching By matching By matching 1 5420700 0 5420700 0 0 0 0 5609 945 5697 24994 16539;16540 16540 2 NRPPLPAGTNSK YLQHLTARNRPPLPAG LPAGTNSKGPPDFSSD R N R S K G 1 1 2 0 0 0 0 1 0 0 1 1 0 0 3 1 1 0 0 0 0 12 1 1250.6731 P42166;P42167;P42167-2;G5E972 P42166 49 60 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 3 0.021239 51.612 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2409900 0 611160 458860 0 499150 840730 5610 913;914 5698 24995;24996;24997;24998 16541 16541 1 NRPPLPAGTNSKGPPDFSSDEER YLQHLTARNRPPLPAG DFSSDEEREPTPVLGS R N R E R E 1 2 2 2 0 0 2 2 0 0 1 1 0 1 5 3 1 0 0 0 0 23 2 2467.1728 P42166;P42167;P42167-2;G5E972 P42166 49 71 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 4 7.5412E-09 75.773 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 7295600 0 2361100 1346200 0 1325500 2262800 5611 913;914 5699 24999;25000;25001;25002 16542;16543 16543 2 NRQEYDALAK LQAKRIRKNRQEYDAL QEYDALAKVIQHHPDR K N R A K V 2 1 1 1 0 1 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 10 1 1206.5993 Q6I9Y2 Q6I9Y2 115 124 THOC7 THO complex subunit 7 homolog yes yes 2 0.026497 73.885 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1216400 0 426330 0 120470 0 669550 5612 1221 5700 25003;25004;25005 16544 16544 1 NRQTFLLQTTK NRAKLLAKNRQTFLLQ TFLLQTTKLTRLARRM K N R T K L 0 1 1 0 0 2 0 0 0 0 2 1 0 1 0 0 3 0 0 0 0 11 1 1348.7463 O94776;Q68DB1 O94776 450 460 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 2;3 1.7085E-29 128.57 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 2 2 2 367460000 0 43729000 57384000 2457900 6403500 257480000 5613 754 5701 25006;25007;25008;25009;25010;25011;25012;25013;25014;25015 16545;16546;16547;16548;16549 16549 5 NRQTFLLQTTKLTR NRAKLLAKNRQTFLLQ LQTTKLTRLARRMCRD K N R T R L 0 2 1 0 0 2 0 0 0 0 3 1 0 1 0 0 4 0 0 0 0 14 2 1718.9792 O94776;Q68DB1 O94776 450 463 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 3;4 4.86E-69 132.65 By matching By matching By MS/MS By matching By matching By matching 2 32715000 0 0 32715000 0 0 0 5614 754 5702 25016;25017 16550;16551 16550 2 NRTSFTQEQIEALEK QLKRKLQRNRTSFTQE EQIEALEKEFERTHYP R N R E K E 1 1 1 0 0 2 3 0 0 1 1 1 0 1 0 1 2 0 0 0 0 15 1 1792.8955 P26367;G3V3Q9;E9PS79;G3V567;G3V5W7;E9PIX4;G3V4N4;G3V4M3;P26367-2 P26367 213 227 PAX6 Paired box protein Pax-6 no no 3 0.0028119 65.038 By matching By MS/MS By matching By matching By matching By matching 1 3587800 0 3587800 0 0 0 0 5615 877;878 5703 25018 16552 16552 1 NRYENVIIPR YRSSKQCRNRYENVII YENVIIPREEGKSKNN R N R P R E 0 2 2 0 0 0 1 0 0 2 0 0 0 0 1 0 0 0 1 1 0 10 1 1272.6939 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91 Q96L91-4 2306 2315 EP400 E1A-binding protein p400 yes no 3 0.030177 57.532 By matching By matching By matching By matching By matching By MS/MS 1 825150 0 0 0 0 0 825150 5616 1405 5704 25019 16553 16553 1 NRYQLEIPENFTTR IVYWGIGRNRYQLEIP IPENFTTRNLPEEYEL R N R T R N 0 2 2 0 0 1 2 0 0 1 1 0 0 1 1 0 2 0 1 0 0 14 1 1779.8904 P52701;B4DF41;F5H2F9;F5H769;P52701-2 P52701 975 988 MSH6 DNA mismatch repair protein Msh6 yes no 3 0.014637 47.639 By matching By MS/MS By matching By matching By matching By matching 1 4586000 0 4586000 0 0 0 0 5617 959 5705 25020 16554 16554 1 NSCVQQSDNLK EKLCSAEKNSCVQQSD VQQSDNLKVAQNSPSV K N S L K V 0 0 2 1 1 2 0 0 0 0 1 1 0 0 0 2 0 0 0 1 0 11 0 1291.5827 Q92576-2;Q92576 Q92576-2 1619 1629 PHF3 PHD finger protein 3 yes no 2 0.013088 61.233 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 2287900 258560 1316900 0 388940 0 323550 5618 1353 5706 25021;25022;25023;25024 16555 16555 1 NSECDPTPSHRGQLNK SDTLSEEKNSECDPTP SHRGQLNKEFTGKEEK K N S N K E 0 1 2 1 1 1 1 1 1 0 1 1 0 0 2 2 1 0 0 0 0 16 1 1838.833 H7BZJ7;Q9BXW9-3;Q9BXW9-2;Q9BXW9 H7BZJ7 390 405 FANCD2 Fanconi anemia group D2 protein yes no 3 0.0020811 58.626 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 3080100 386130 471780 547410 363040 655470 656280 5619 661 5707 25025;25026;25027;25028;25029;25030 16556;16557;16558 16557 3 NSEKEQDSEVSEDTKSEEK AQDGENEKNSEKEQDS EDTKSEEKETEENKEL K N S E K E 0 0 1 2 0 1 6 0 0 0 0 3 0 0 0 4 1 0 0 1 0 19 2 2196.9506 Q92922 Q92922 815 833 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 4 0.012755 39.585 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 3828200 560440 0 1663000 538470 554920 511340 5620 1365 5708 25031;25032;25033;25034;25035 16559 16559 1 NSFRYNGLIHRK EPNNLKARNSFRYNGL YNGLIHRKTVGVEPAA R N S R K T 0 2 2 0 0 0 0 1 1 1 1 1 0 1 0 1 0 0 1 0 0 12 2 1503.8059 P46779;C9JB50;G5E9L2;H0YLP6;H0YMF4;P46779-2;E9PB24;H0YKD8 P46779 36 47 RPL28 60S ribosomal protein L28 yes no 3 0.011856 67.749 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3488700 0 0 0 792190 1490600 1206000 5621 926 5709 25036;25037;25038 16560 16560 1 NSGAEAAQLSER VQLRPVRKNSGAEAAQ EAAQLSERTAQEQRTP K N S E R T 3 1 1 0 0 1 2 1 0 0 1 0 0 0 0 2 0 0 0 0 0 12 0 1231.5793 Q5SYE7-2;Q5SYE7 Q5SYE7-2 1084 1095 NHSL1 NHS-like protein 1 yes no 2 0.0044546 65.043 By matching By matching By matching By matching By matching By MS/MS 1 1 451650 127210 0 0 0 0 324440 5622 1187 5710 25039;25040 16561 16561 1 NSGFRRSDDMFTFHGPGK NMGSSQQKNSGFRRSD FTFHGPGKSVFGTPTL K N S G K S 0 2 1 2 0 0 0 3 1 0 0 1 1 3 1 2 1 0 0 0 0 18 2 2054.9381 P49792 P49792 1122 1139 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 4 0.0049485 46.324 By matching By matching By MS/MS By matching By matching By matching 1 1 1 11349000 0 0 5336600 2518500 0 3493900 5623 945 5711 25041;25042;25043 16562 16562 1 NSGPLGTEMNTGFSSEVK FGSPLEFRNSGPLGTE TGFSSEVKEDLNGPFL R N S V K E 0 0 2 0 0 0 2 3 0 0 1 1 1 1 1 3 2 0 0 1 0 18 0 1853.8465 Q9UQ35;F5GWZ7;Q9UQ35-2;I3L2L6 Q9UQ35 1335 1352 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 4.2455E-46 118.66 By matching By MS/MS By matching By matching By matching By matching 1 6310700 0 6310700 0 0 0 0 5624 1623 5712 25044 16563 16563 1 NSIDASEEKPVMR SLKVKKGKNSIDASEE SEEKPVMRKKRGREDE K N S M R K 1 1 1 1 0 0 2 0 0 1 0 1 1 0 1 2 0 0 0 1 0 13 1 1474.7086 Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-4;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9;Q9NRZ9-8;Q9NRZ9-7;B1ALG6 Q9NRZ9-6 114 126 HELLS Lymphoid-specific helicase yes no 3 9.3433E-47 128.68 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 6510400 455140 927230 1121200 449970 796510 2760400 5625 1540 5713 25045;25046;25047;25048;25049;25050 16564;16565;16566;16567;16568;16569 16565 6 NSLDSFGGRNQGGSSWEAPYSR GRFESSYRNSLDSFGG SWEAPYSRSKLRPGFM R N S S R S 1 2 2 1 0 1 1 4 0 0 1 0 0 1 1 5 0 1 1 0 0 22 1 2371.0577 Q5BKZ1 Q5BKZ1 117 138 ZNF326 DBIRD complex subunit ZNF326 yes yes 3 1.6881E-06 66.536 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 5727500 0 3174900 0 0 0 2552600 5626 1177 5714 25051;25052 16570;16571 16570 2 NSLKIDNLDVNR QRIHAEIKNSLKIDNL IDNLDVNRCIEALDEL K N S N R C 0 1 3 2 0 0 0 0 0 1 2 1 0 0 0 1 0 0 0 1 0 12 1 1399.7419 O75475 O75475 361 372 PSIP1 PC4 and SFRS1-interacting protein yes yes 3 0.039592 44.829 By matching By matching By matching By matching By matching By MS/MS 1 793050 0 0 0 0 0 793050 5627 741 5715 25053 16572 16572 1 NSLNDCSNQVILAK EENLLSLKNSLNDCSN SNQVILAKASQEHHLS K N S A K A 1 0 3 1 1 1 0 0 0 1 2 1 0 0 0 2 0 0 0 1 0 14 0 1574.7723 E9PFZ0;P38398-4;P38398-2;P38398;E9PFC7;E7EP70;F8W8H7;E7EMP0;H0Y850 E9PFZ0 1218 1231 BRCA1 Breast cancer type 1 susceptibility protein yes no 2 0.0021642 65.038 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 9598000 0 2140000 1470500 900570 1512800 3574100 5628 426 5716 25054;25055;25056;25057;25058 16573;16574;16575 16573 2 NSLSNSSGASADAGSTHISSR SDSHHGGKNSLSNSSG GSTHISSREGVGTASG K N S S R E 3 1 2 1 0 0 0 2 1 1 1 0 0 0 0 8 1 0 0 0 0 21 0 2004.9097 P20719 P20719 120 140 HOXA5 Homeobox protein Hox-A5 yes yes 3 8.8004E-23 97.621 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 12034000 0 2769400 3032200 0 743210 5488700 5629 857 5717 25059;25060;25061;25062 16576;16577 16576 2 NSLTSKDPDIK VAAGLQIKNSLTSKDP TSKDPDIKAQYQQRWL K N S I K A 0 0 1 2 0 0 0 0 0 1 1 2 0 0 1 2 1 0 0 0 0 11 1 1216.6299 Q14974 Q14974 63 73 KPNB1 Importin subunit beta-1 yes yes 2 0.01667 70.089 By matching By MS/MS By matching By matching By matching By matching 1 1 3163500 0 2757200 406240 0 0 0 5630 1119 5718 25063;25064 16578 16578 1 NSLTSKDPDIKAQYQQR VAAGLQIKNSLTSKDP IKAQYQQRWLAIDANA K N S Q R W 1 1 1 2 0 3 0 0 0 1 1 2 0 0 1 2 1 0 1 0 0 17 2 1991.0072 Q14974 Q14974 63 79 KPNB1 Importin subunit beta-1 yes yes 3;4 0.0022617 77.068 By matching By matching By MS/MS By matching By matching By matching 1 2 2 2 2 11554000 0 1932500 2956000 2058500 2303800 2302900 5631 1119 5719 25065;25066;25067;25068;25069;25070;25071;25072;25073 16579;16580 16580 2 NSLYDMAR SQASAAARNSLYDMAR NSLYDMARYEREQYAD R N S A R Y 1 1 1 1 0 0 0 0 0 0 1 0 1 0 0 1 0 0 1 0 0 8 0 968.43857 Q9BWF3;E9PB51;Q9BQ04;B0LM41;H0YDG8 Q9BWF3 342 349 RBM4;RBM4B;RBM14 RNA-binding protein 4;RNA-binding protein 4B;RNA-binding protein 14 yes no 2 0.012377 90.601 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 16495000 676460 2464600 3167800 660290 1695400 7830700 5632 1457 5720 25074;25075;25076;25077;25078;25079 16581;16582;16583 16581 3 NSMPASSFQQQK REAEEVYRNSMPASSF ASSFQQQKLRVCEVCS R N S Q K L 1 0 1 0 0 3 0 0 0 0 0 1 1 1 1 3 0 0 0 0 0 12 0 1351.619 B7Z500;Q9Y383-2;Q9Y383;B7Z4Q3 B7Z500 172 183 LUC7L2;C7orf55 Putative RNA-binding protein Luc7-like 2;UPF0562 protein C7orf55 no no 2 0.0024353 74.611 By matching By matching By matching By matching By matching By MS/MS 1 1 1868700 0 0 0 0 401590 1467200 5633 186 5721 25080;25081 16584 16584 1 NSNLVGAAHEELQQSR NARQSAERNSNLVGAA HEELQQSRIRIDSLSA R N S S R I 2 1 2 0 0 2 2 1 1 0 2 0 0 0 0 2 0 0 0 1 0 16 0 1751.8551 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCJ4;Q5TCI8 P02545 281 296 LMNA Prelamin-A/C;Lamin-A/C yes no 2;3 1.3264E-26 107.13 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 1 2 2 33379000 4622300 4999000 3689500 764750 5480400 13823000 5634 783 5722 25082;25083;25084;25085;25086;25087;25088;25089;25090;25091;25092 16585;16586;16587;16588;16589;16590;16591 16591 7 NSPEDLGLSLTGDSCK KTSEIEPKNSPEDLGL SLTGDSCKLMLSTSEY K N S C K L 0 0 1 2 1 0 1 2 0 0 3 1 0 0 1 3 1 0 0 0 0 16 0 1691.7672 Q12888;Q12888-2;A6NNK5;F8VY86;C9JXV0 Q12888 499 514 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 6.5997E-07 91.317 By matching By MS/MS By matching By matching By matching By matching 1 1 46734000 0 38224000 0 8509900 0 0 5635 1063 5723 25093;25094 16592 16592 1 NSPGSQVASNPR TPHALGSRNSPGSQVA SQVASNPRQAAYEMRM R N S P R Q 1 1 2 0 0 1 0 1 0 0 0 0 0 0 2 3 0 0 0 1 0 12 0 1212.5847 Q9H0D6-2;B4DZC3;Q9H0D6 Q9H0D6-2 371 382 XRN2 5-3 exoribonuclease 2 yes no 2 0.0021235 75.89 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 3244000 310470 897040 1044100 0 324110 668320 5636 146 5724 25095;25096;25097;25098;25099 16593;16594 16594 2 NSPGSQVASNPRQAAYEMR TPHALGSRNSPGSQVA RQAAYEMRMQNNSSPS R N S M R M 3 2 2 0 0 2 1 1 0 0 0 0 1 0 2 3 0 0 1 1 0 19 1 2061.965 Q9H0D6-2;B4DZC3;Q9H0D6 Q9H0D6-2 371 389 XRN2 5-3 exoribonuclease 2 yes no 3 0.0045086 46.892 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 13567000 0 1772500 1807400 2056100 3539200 4391600 5637 146 5725 25100;25101;25102;25103;25104 16595 16595 1 NSQLFAASQK IGKDHESKNSQLFAAS QLFAASQKFRKNTAPS K N S Q K F 2 0 1 0 0 2 0 0 0 0 1 1 0 1 0 2 0 0 0 0 0 10 0 1092.5564 Q9Y232-2;Q9Y232 Q9Y232-2 109 118 CDYL Chromodomain Y-like protein yes no 2 0.02723 58.511 By matching By matching By matching By matching By matching By MS/MS 1 1 1657600 378690 0 0 0 0 1278900 5638 1628 5726 25105;25106 16596 16596 1 NSQVRLPLGTLSK EHAAKYMKNSQVRLPL LPLGTLSKSEWEATSI K N S S K S 0 1 1 0 0 1 0 1 0 0 3 1 0 0 1 2 1 0 0 1 0 13 1 1411.8147 O43148;O43148-2;F5H2D9 O43148 446 458 RNMT mRNA cap guanine-N7 methyltransferase yes no 2;3 2.2213E-09 104.81 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 2 1 141750000 69534000 394390 24270000 10067000 7014200 30466000 5639 709 5727 25107;25108;25109;25110;25111;25112;25113;25114;25115 16597;16598;16599;16600;16601;16602 16601 5 NSSGPQSGWMK NYYSRRGRNSSGPQSG GPQSGWMKQEEETSGQ R N S M K Q 0 0 1 0 0 1 0 2 0 0 0 1 1 0 1 3 0 1 0 0 0 11 0 1177.5186 Q99590-2;F8VXG7;Q99590 Q99590-2 853 863 SCAF11 Protein SCAF11 yes no 2 0.0018924 89.9 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 8983100 758170 749940 1222800 715600 2289800 3246900 5640 547 5728 25116;25117;25118;25119;25120;25121 16603;16604;16605 16603 1 NSSPEPQALTPSSK SLDSLAMKNSSPEPQA QALTPSSKLTVDTDTL K N S S K L 1 0 1 0 0 1 1 0 0 0 1 1 0 0 3 4 1 0 0 0 0 14 0 1441.7049 P98168;P98169 P98168 712 725 ZXDA;ZXDB Zinc finger X-linked protein ZXDA;Zinc finger X-linked protein ZXDB yes no 2 0.0038587 58.626 By matching By MS/MS By matching By matching By matching By matching 1 1 1474300 0 609450 0 0 0 864840 5641 1018 5729 25122;25123 16606 16606 1 NSSSEQLFSSAR KLANKPDKNSSSEQLF EQLFSSARLQNEKKTI K N S A R L 1 1 1 0 0 1 1 0 0 0 1 0 0 1 0 5 0 0 0 0 0 12 0 1311.6055 C9K0Y1;Q96GN5-4;Q96GN5-2;Q96GN5;C9IZR6 C9K0Y1 114 125 CDCA7L Cell division cycle-associated 7-like protein yes no 2 0.011869 57.434 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2650700 0 751260 0 0 0 1899400 5642 280 5730 25124;25125 16607;16608 16608 2 NSSSSGTSLLTPK SVSSSVAKNSSSSGTS GTSLLTPKSSSSTNTS K N S P K S 0 0 1 0 0 0 0 1 0 0 2 1 0 0 1 5 2 0 0 0 0 13 0 1277.6463 Q9NXV6 Q9NXV6 336 348 CDKN2AIP CDKN2A-interacting protein yes yes 2 3.0237E-24 116.9 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 39447000 5355000 0 6116000 7715900 10243000 10017000 5643 1560 5731 25126;25127;25128;25129;25130 16609;16610 16610 2 NSSTEPKGFTECEMTK TENQIPAKNSSTEPKG FTECEMTKSSPLKITL K N S T K S 0 0 1 0 1 0 3 1 0 0 0 2 1 1 1 2 3 0 0 0 0 16 1 1844.7921 Q9NQW6 Q9NQW6 501 516 ANLN Actin-binding protein anillin yes yes 3 0.0057927 48.729 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 24054000 2538100 2752900 5814400 3788500 3631400 5528800 5644 1533 5732 25131;25132;25133;25134;25135;25136 16611;16612;16613;16614 16612 4 NSSTIIQNPVETPK QQLNDVVKNSSTIIQN QNPVETPKKDYSLLPL K N S P K K 0 0 2 0 0 1 1 0 0 2 0 1 0 0 2 2 2 0 0 1 0 14 0 1526.794 P38432 P38432 445 458 COIL Coilin yes yes 2 0.0011073 71.879 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 2 26565000 0 4792100 2698500 1239900 6554100 11281000 5645 904 5733 25137;25138;25139;25140;25141;25142;25143 16615;16616;16617;16618;16619;16620 16615 5 NSSTIIQNPVETPKK QQLNDVVKNSSTIIQN NPVETPKKDYSLLPLL K N S K K D 0 0 2 0 0 1 1 0 0 2 0 2 0 0 2 2 2 0 0 1 0 15 1 1654.889 P38432 P38432 445 459 COIL Coilin yes yes 3 4.9604E-56 126.56 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 50740000 4259600 8890400 6587100 3351800 8348800 19302000 5646 904 5734 25144;25145;25146;25147;25148;25149 16621;16622;16623;16624;16625 16623 5 NSTADISIGEEER KLKEDEQRNSTADISI ISIGEEEREDFDTSIE R N S E R E 1 1 1 1 0 0 3 1 0 2 0 0 0 0 0 2 1 0 0 0 0 13 0 1419.6478 Q9NRL2-2;Q9NRL2;F5H239 Q9NRL2-2 664 676 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 2 0.018793 52.966 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 2578900 0 701780 0 194030 585120 1098000 5647 1536 5735 25150;25151;25152;25153 16626;16627;16628 16626 2 NSTEFSQMEK KKNVAKVKNSTEFSQM TEFSQMEKSTKKTSFK K N S E K S 0 0 1 0 0 1 2 0 0 0 0 1 1 1 0 2 1 0 0 0 0 10 0 1199.5129 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;Q76FK4-3;F5GWN9 F5H101 396 405 NOL8 Nucleolar protein 8 yes no 2 0.012231 70.412 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 12303000 1702300 1864600 3395800 0 5339900 0 5648 27 5736 25154;25155;25156;25157 16629;16630;16631;16632 16631 4 NSTSRNPSGINDDYGQLK EFRSLVIKNSTSRNPS NDDYGQLKNFKKFKKV K N S L K N 0 1 3 2 0 1 0 2 0 1 1 1 0 0 1 3 1 0 1 0 0 18 1 1964.9188 O60934 O60934 666 683 NBN Nibrin yes yes 3 1.3754E-22 106.35 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 19755000 2383500 3678800 3523400 1644600 3318500 5206200 5649 736 5737 25158;25159;25160;25161;25162;25163 16633;16634;16635;16636;16637 16633 5 NSVERPAEPVAGAATPSLVEQQK RMCADVRRNSVERPAE PSLVEQQKMLEELNKQ R N S Q K M 4 1 1 0 0 2 3 1 0 0 1 1 0 0 3 2 1 0 0 3 0 23 1 2377.2238 Q9BTC0 Q9BTC0 1455 1477 DIDO1 Death-inducer obliterator 1 yes yes 3 0.003828 46.818 By MS/MS By matching By matching By matching By matching By matching 1 1886700 1886700 0 0 0 0 0 5650 1447 5738 25164 16638;16639 16638 2 NSYHPECLGPNYPTKPTK LLECNKCRNSYHPECL NYPTKPTKKKKVWICT R N S T K K 0 0 2 0 1 0 1 1 1 0 1 2 0 0 4 1 2 0 2 0 0 18 1 2101.9891 Q03164-2;Q03164;E9PQG7;H7BYJ6 Q03164-2 1465 1482 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 4 0.026143 37.157 By matching By matching By matching By matching By MS/MS By matching 1 1 1200800 0 0 0 0 549540 651240 5651 464 5739 25165;25166 16640 16640 1 NSYNNSQAPSPGLGSK KTLTEHLKNSYNNSQA PSPGLGSKAVGMPSPV K N S S K A 1 0 3 0 0 1 0 2 0 0 1 1 0 0 2 4 0 0 1 0 0 16 0 1619.754 Q9UHB7 Q9UHB7 1034 1049 AFF4 AF4/FMR2 family member 4 yes yes 2 8.5047E-38 117.18 By MS/MS By matching By matching By matching By MS/MS By matching 2 1 1 5529700 2199200 1037800 0 0 2292700 0 5652 1592 5740 25167;25168;25169;25170 16641;16642;16643;16644 16642 4 NTAGAQPQDDSIGGR GSLRRSQRNTAGAQPQ QDDSIGGRSHLGQAKH R N T G R S 2 1 1 2 0 2 0 3 0 1 0 0 0 0 1 1 1 0 0 0 0 15 0 1485.6808 Q14CA3;Q14669;B4DYJ6;G5E9G6;C9JLD7;C9JLJ5;C9JSX9;F8W9P3 Q14CA3 19 33 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 2 1.7771E-13 103.66 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 2765000 244650 507280 0 0 770310 1242700 5653 1122 5741 25171;25172;25173;25174 16645;16646 16645 2 NTAGAQPQDDSIGGRSHLGQAK GSLRRSQRNTAGAQPQ RSHLGQAKHKGYSPPE R N T A K H 3 1 1 2 0 3 0 4 1 1 1 1 0 0 1 2 1 0 0 0 0 22 1 2207.0679 Q14CA3;B4DYJ6;G5E9G6;C9JLD7 Q14CA3 19 40 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 4 0.016181 63.436 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 2 1 8323100 856680 786090 1516000 996260 2061000 2107100 5654 1122 5742 25175;25176;25177;25178;25179;25180;25181 16647;16648 16647 1 NTAMDAQEALAR SPPPFRGRNTAMDAQE DAQEALARRQNT____ R N T A R R 4 1 1 1 0 1 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 12 0 1289.6034 H0YGP9;E1B6W4;F5GXM2;Q7L4I2-2;Q7L4I2 H0YGP9 161 172 RSRC2 Arginine/serine-rich coiled-coil protein 2 yes no 2 0.0017881 77.894 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4666900 0 594610 0 373390 1316300 2382600 5655 333 5743 25182;25183;25184;25185 16649;16650 16650 2 NTAPDNGPILLQAQTTQR LPKALLSKNTAPDNGP LQAQTTQRCHDKDINS K N T Q R C 2 1 2 1 0 3 0 1 0 1 2 0 0 0 2 0 3 0 0 0 0 18 0 1936.9967 Q12788 Q12788 459 476 TBL3 Transducin beta-like protein 3 yes yes 2 5.1854E-74 128.94 By matching By matching By matching By matching By matching By MS/MS 1 1 7647400 0 0 0 238810 0 7408600 5656 1058 5744 25186;25187 16651 16651 1 NTAPDNGPILLQAQTTQRCHDK LPKALLSKNTAPDNGP TTQRCHDKDINSVAIA K N T D K D 2 1 2 2 1 3 0 1 1 1 2 1 0 0 2 0 3 0 0 0 0 22 1 2477.2081 Q12788 Q12788 459 480 TBL3 Transducin beta-like protein 3 yes yes 3;4 0.0063568 43.326 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 2 2 2 1 11297000 449190 598380 5058200 1040100 2685600 1465700 5657 1058 5745 25188;25189;25190;25191;25192;25193;25194;25195;25196 16652;16653 16652 2 NTASQNSILEEGETK VLMSSPEKNTASQNSI ILEEGETKISQSELFD K N T T K I 1 0 2 0 0 1 3 1 0 1 1 1 0 0 0 2 2 0 0 0 0 15 0 1619.7639 A8MTM6;Q15398;Q15398-1 A8MTM6 771 785 DLGAP5 Disks large-associated protein 5 yes no 2 0.008098 48.899 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 12667000 792830 3281000 2112500 572700 2329600 3578200 5658 42 5746 25197;25198;25199;25200;25201;25202 16654;16655;16656 16654 3 NTDEMVELR EQAFKRSRNTDEMVEL TDEMVELRILLQSKNA R N T L R I 0 1 1 1 0 0 2 0 0 0 1 0 1 0 0 0 1 0 0 1 0 9 0 1105.5074 P61978-3;P61978-2;B4DFF1;P61978;Q5T6W5;Q5T6W2 P61978-3 38 46 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2 2.8902E-19 126.39 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 48460000 9440600 12637000 3716200 2700200 5129900 14836000 5659 984 5747 25203;25204;25205;25206;25207;25208;25209 16657;16658;16659;16660;16661;16662;16663;16664 16664 8 NTENNDVEISETK EKSLIGLKNTENNDVE DVEISETKKADVQAPV K N T T K K 0 0 3 1 0 0 3 0 0 1 0 1 0 0 0 1 2 0 0 1 0 13 0 1491.6689 Q5UIP0-2;Q5UIP0;H7C2B5 Q5UIP0-2 1751 1763 RIF1 Telomere-associated protein RIF1 yes no 2 0.0015443 88.075 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 3450400 0 780410 0 0 699610 1970400 5660 1201 5748 25210;25211;25212 16665;16666;16667 16666 3 NTETALDNKPCGPQCYQHLEGAK TPNTYKRKNTETALDN YQHLEGAKEFAAALTA K N T A K E 2 0 2 1 2 2 2 2 1 0 2 2 0 0 2 0 2 0 1 0 0 23 1 2630.1853 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 301 323 EZH2 Histone-lysine N-methyltransferase EZH2 yes no 4 0.013367 36.454 By matching By matching By matching By matching By matching By MS/MS 1 2307400 0 0 0 0 0 2307400 5661 1149 5749 25213 16668 16668 1 NTGIICTIGPASR DSPPITARNTGIICTI CTIGPASRSVETLKEM R N T S R S 1 1 1 0 1 0 0 2 0 3 0 0 0 0 1 1 2 0 0 0 0 13 0 1358.6976 P14618;H3BQ34;E9PF79;H3BTN5;P14618-2;H3BT25;H3BUW1;H3BTJ2;H3BU13 P14618 44 56 PKM Pyruvate kinase PKM;Pyruvate kinase yes no 2 1.0752E-59 131.35 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 17484000 0 2104500 2746200 0 6853300 5779800 5662 837 5750 25214;25215;25216;25217 16669;16670;16671 16670 2 NTGVILANDANAER SYMAQLMKNTGVILAN ANDANAERLKSVVGNL K N T E R L 3 1 3 1 0 0 1 1 0 1 1 0 0 0 0 0 1 0 0 1 0 14 0 1456.727 P46087;Q3KQS4;P46087-2;Q05BA7 P46087 408 421 NOP2 Putative ribosomal RNA methyltransferase NOP2 yes no 2 0.02722 50.874 By matching By matching By matching By matching By MS/MS By matching 1 1 2257700 0 0 0 0 1376300 881370 5663 923 5751 25218;25219 16672 16672 0 NTGVILANDANAERLK SYMAQLMKNTGVILAN DANAERLKSVVGNLHR K N T L K S 3 1 3 1 0 0 1 1 0 1 2 1 0 0 0 0 1 0 0 1 0 16 1 1697.906 P46087;Q3KQS4;P46087-2;Q05BA7 P46087 408 423 NOP2 Putative ribosomal RNA methyltransferase NOP2 yes no 2 0.021947 46.249 By matching By matching By matching By matching By MS/MS By matching 1 1 2135300 0 0 0 0 1653500 481840 5664 923 5752 25220;25221 16673 16673 1 NTHCSSLPHYQK YTNEEVAKNTHCSSLP SSLPHYQKLKKFLNKL K N T Q K L 0 0 1 0 1 1 0 0 2 0 1 1 0 0 1 2 1 0 1 0 0 12 0 1470.6674 P43243;A8MXP9;B3KM87;P43243-2;Q68E03 P43243 818 829 MATR3;DKFZp686L22104 Matrin-3 yes no 3 0.039456 42.243 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 7248300 1333700 2587600 2242200 0 0 1084800 5665 52 5753 25222;25223;25224;25225 16674 16674 1 NTHCSSLPHYQKLK YTNEEVAKNTHCSSLP LPHYQKLKKFLNKLAE K N T L K K 0 0 1 0 1 1 0 0 2 0 2 2 0 0 1 2 1 0 1 0 0 14 1 1711.8464 P43243;A8MXP9;B3KM87;P43243-2;Q68E03 P43243 818 831 MATR3;DKFZp686L22104 Matrin-3 yes no 3 0.0061984 54.871 By MS/MS By matching By matching By matching By matching By matching 1 607380 607380 0 0 0 0 0 5666 52 5754 25226 16675 16675 1 NTIAYDRYIK QKQINYGKNTIAYDRY IAYDRYIKEVPRHLRQ K N T I K E 1 1 1 1 0 0 0 0 0 2 0 1 0 0 0 0 1 0 2 0 0 10 1 1255.6561 H7C4H8;H0YAE8;Q14493-2;E7EUV9;C9IY53;Q14493;F8W8D3 H7C4H8 155 164 SLBP Histone RNA hairpin-binding protein yes no 2 9.2689E-15 121.36 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2992900 0 1904200 1088600 0 0 0 5667 220 5755 25227;25228;25229 16676;16677 16677 2 NTKIPCKSPPPELTDTATSTK EESMTIDKNTKIPCKS TDTATSTKRCPKTRPR K N T T K R 1 0 1 1 1 0 1 0 0 1 1 3 0 0 4 2 5 0 0 0 0 21 2 2285.1573 P46013;F5H4V4;P46013-2 P46013 2581 2601 MKI67 Antigen KI-67 no no 3;4 3.6186E-33 104.68 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 3 2 83268000 10904000 19425000 12859000 4684100 13314000 22082000 5668 919;920 5756 25230;25231;25232;25233;25234;25235;25236;25237;25238;25239;25240;25241;25242 16678;16679;16680;16681;16682;16683;16684;16685;16686;16687;16688;16689 16683 12 NTKSPQPVNDDNIRETK PSQGLAKKNTKSPQPV DDNIRETKNAVIRDLG K N T T K N 0 1 3 2 0 1 1 0 0 1 0 2 0 0 2 1 2 0 0 1 0 17 2 1954.9708 Q86TC9-2;F5H7I9;Q86TC9;F5GWA6 Q86TC9-2 589 605 MYPN Myopalladin yes no 4 0.0074926 44.598 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 3123000 0 0 954420 562680 933070 672830 5669 481 5757 25243;25244;25245;25246 16690 16690 1 NTLETSSLNFK AVDGEGFKNTLETSSL ETSSLNFKVTPDIEES K N T F K V 0 0 2 0 0 0 1 0 0 0 2 1 0 1 0 2 2 0 0 0 0 11 0 1252.6299 Q14151;B4DU53 Q14151 189 199 SAFB2 Scaffold attachment factor B2 yes no 2 2.4785E-69 143 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 120450000 0 8013700 0 347240 97322000 14771000 5670 1097 5758 25247;25248;25249;25250 16691;16692;16693 16692 3 NTLGSGVTGAANVAK QNIATGTKNTLGSGVT TGAANVAKGAIQGGLD K N T A K G 3 0 2 0 0 0 0 3 0 0 1 1 0 0 0 1 2 0 0 2 0 15 0 1358.7154 Q96Q06-2 Q96Q06-2 783 797 PLIN4 Perilipin-4 yes yes 2 1.4567E-70 134.88 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 11147000 0 1910900 1342100 794060 1895100 5204600 5671 1413 5759 25251;25252;25253;25254;25255 16694;16695 16694 2 NTMFSSQAEDELEPARK EVKERVEKNTMFSSQA DELEPARKKRREQLAY K N T R K K 2 1 1 1 0 1 3 0 0 0 1 1 1 1 1 2 1 0 0 0 0 17 1 1951.8946 Q5T670;Q7L590-2;Q7L590 Q5T670 700 716 MCM10 Protein MCM10 homolog yes no 3 0.0004885 66.738 By matching By matching By matching By matching By MS/MS By matching 1 3413900 0 0 0 0 3413900 0 5672 1193 5760 25256 16696 16696 0 NTNAAEESLPEIQK DKAAEVVKNTNAAEES ESLPEIQKEHRNLLQE K N T Q K E 2 0 2 0 0 1 3 0 0 1 1 1 0 0 1 1 1 0 0 0 0 14 0 1542.7526 E9PD53;Q9NTJ3;F5H0U7 E9PD53 950 963 SMC4 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 4 yes no 2 0.020765 44.925 By matching By MS/MS By matching By matching By matching By matching 1 1 1332000 0 1020000 312020 0 0 0 5673 419 5761 25257;25258 16697 16697 1 NTNAETRETLQELYK QDPSYYLKNTNAETRE ETLQELYKEFKGDEIL K N T Y K E 1 1 2 0 0 1 3 0 0 0 2 1 0 0 0 0 3 0 1 0 0 15 1 1808.8905 Q13356;Q13356-2;E7EW80 Q13356 199 213 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes no 3 0.00051153 72.209 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 19862000 1371600 3164200 3367300 1544800 0 10414000 5674 1079 5762 25259;25260;25261;25262;25263 16698;16699;16700;16701 16700 4 NTNSVPETAPAAIPETK RERMQIKRNTNSVPET PAAIPETKRNAEFLTC R N T T K R 3 0 2 0 0 0 2 0 0 1 0 1 0 0 3 1 3 0 0 1 0 17 0 1738.8737 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 368 384 ADAR Double-stranded RNA-specific adenosine deaminase no no 2 0.0017201 57.936 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 30203000 0 0 9544500 4617500 0 16041000 5675 352;968 5763 25264;25265;25266 16702;16703;16704;16705 16703 4 NTNSVPETAPAAIPETKR RERMQIKRNTNSVPET AAIPETKRNAEFLTCN R N T K R N 3 1 2 0 0 0 2 0 0 1 0 1 0 0 3 1 3 0 0 1 0 18 1 1894.9749 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 368 385 ADAR Double-stranded RNA-specific adenosine deaminase no no 3 0.0006795 67.418 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2 1 36159000 29624000 1258400 1623900 736670 1567900 1347400 5676 352;968 5764 25267;25268;25269;25270;25271;25272;25273;25274 16706;16707;16708;16709;16710;16711 16706 6 NTPYQAPVRR AVRQSKLRNTPYQAPV PYQAPVRRQMKAKQLS R N T R R Q 1 2 1 0 0 1 0 0 0 0 0 0 0 0 2 0 1 0 1 1 0 10 1 1200.6364 P49790;F6QR24;Q4LE47 P49790 280 289 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 3 0.0014371 97.431 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 7729300 878940 824730 1551400 686980 1388200 2399000 5677 531 5765 25275;25276;25277;25278;25279;25280 16712;16713;16714;16715;16716 16715 5 NTSAAIQAYRHAIEVNK GHEYMEMKNTSAAIQA RHAIEVNKRDYRAWYG K N T N K R 4 1 2 0 0 1 1 0 1 2 0 1 0 0 0 1 1 0 1 1 0 17 1 1884.9806 Q9UJX2;Q9UJX2-3 Q9UJX2 380 396 CDC23 Cell division cycle protein 23 homolog yes no 3 0.0033208 51.073 By matching By matching By matching By matching By matching By MS/MS 1 2618000 0 0 0 0 0 2618000 5678 1598 5766 25281 16717 16717 1 NTVTVRGYSQESTKK KATKSINKNTVTVRGY YSQESTKKKLSQKKLV K N T K K K 0 1 1 0 0 1 1 1 0 0 0 2 0 0 0 2 3 0 1 2 0 15 2 1696.8744 Q5FWF5;Q5FWF5-2 Q5FWF5 86 100 ESCO1 N-acetyltransferase ESCO1 yes no 3 0.0025391 76.759 By matching By matching By matching By matching By matching By MS/MS 1 2123400 0 0 0 0 0 2123400 5679 1180 5767 25282 16718 16718 1 NTVVATGGYGR SIHRIRAKNTVVATGG VATGGYGRTYFSCTSA K N T G R T 1 1 1 0 0 0 0 3 0 0 0 0 0 0 0 0 2 0 1 2 0 11 0 1093.5516 E9PBJ5;P31040;D6RFM5 E9PBJ5 203 213 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 2 0.012879 61.48 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 3528500 0 0 749100 331540 0 2447900 5680 407 5768 25283;25284;25285 16719;16720 16720 2 NVADDTRSEDLRR PNTSLFVRNVADDTRS TRSEDLRREFGRYGPI R N V R R E 1 3 1 3 0 0 1 0 0 0 1 0 0 0 0 1 1 0 0 1 0 13 2 1545.7495 O75494-5;Q5JRI1;O75494-4;Q5JRI3;O75494-3;O75494-2;O75494 O75494-5 16 28 SRSF10 Serine/arginine-rich splicing factor 10 yes no 3 0.034862 54.343 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 18419000 206920 8920700 0 1451900 3515700 4323300 5681 743 5769 25286;25287;25288;25289;25290 16721 16721 1 NVALLSQLYHSPARR AANPNQNKNVALLSQL LYHSPARRFGGPVHHQ K N V R R F 2 2 1 0 0 1 0 0 1 0 3 0 0 0 1 2 0 0 1 1 0 15 1 1723.9482 Q15717 Q15717 192 206 ELAVL1 ELAV-like protein 1 yes yes 3 0.00063564 69.314 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 755240000 26649000 43055000 11373000 1990000 10844000 661330000 5682 1146 5770 25291;25292;25293;25294;25295;25296 16722;16723;16724;16725 16722 4 NVASPSRIQQIIEGK TKVDLAEKNVASPSRI IQQIIEGKLFPMKALG K N V G K L 1 1 1 0 0 2 1 1 0 3 0 1 0 0 1 2 0 0 0 1 0 15 1 1638.9053 O60313;E5KLK1;E5KLJ6;E5KLJ9;O60313-2;E5KLJ5 O60313 475 489 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 3 0.00072881 79.875 By matching By MS/MS By matching By matching By matching By matching 1 6273100 0 6273100 0 0 0 0 5683 336 5771 25297 16726 16726 1 NVCEQGTSTVDQNFGK SAATQTIKNVCEQGTS TVDQNFGKQDATVQTE K N V G K Q 0 0 2 1 1 2 1 2 0 0 0 1 0 1 0 1 2 0 0 2 0 16 0 1782.7843 Q12888;Q12888-2;A6NNK5;F8VY86 Q12888 1176 1191 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 6.2901E-18 101.42 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 13321000 1060800 4607800 1879700 1081300 0 4691400 5684 1063 5772 25298;25299;25300;25301;25302;25303 16727;16728;16729;16730;16731;16732;16733 16729 7 NVESTNSNAYTQR DPPTRIGKNVESTNSN NSNAYTQRSSTDFSEL K N V Q R S 1 1 3 0 0 1 1 0 0 0 0 0 0 0 0 2 2 0 1 1 0 13 0 1482.6699 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 943 955 LUZP1 Leucine zipper protein 1 yes no 2 0.00553 60.55 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 4894000 0 849560 613500 460540 670980 2299400 5685 1265 5773 25304;25305;25306;25307;25308 16734 16734 1 NVETHTGSLIEQLTTEK GKQNHVLKNVETHTGS IEQLTTEKYECMVCCE K N V E K Y 0 0 1 0 0 1 3 1 1 1 2 1 0 0 0 1 4 0 0 1 0 17 0 1898.9585 Q12986;Q12986-2;F5GXD0;Q12986-3 Q12986 339 355 NFX1 Transcriptional repressor NF-X1 yes no 3 0.031351 53.453 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 5686 1066 5774 25309 16735 16735 1 NVETKPDKGISCK PSKGRPAKNVETKPDK PDKGISCKVDSEENTL K N V C K V 0 0 1 1 1 0 1 1 0 1 0 3 0 0 1 1 1 0 0 1 0 13 2 1474.745 A8MTM6;Q15398;Q15398-1 A8MTM6 251 263 DLGAP5 Disks large-associated protein 5 yes no 3 0.027042 56.956 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 3905300 0 1368900 1926400 398180 0 211730 5687 42 5775 25310;25311;25312;25313 16736 16736 1 NVFSSSGTSFSGRK FTVGSNGKNVFSSSGT GTSFSGRKIKTAVRRR K N V R K I 0 1 1 0 0 0 0 2 0 0 0 1 0 2 0 5 1 0 0 1 0 14 1 1459.7056 P49790;F6QR24;Q4LE47 P49790 1453 1466 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 2;3 0.00057287 84.753 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 2 2 2 2 12719000 577940 2656400 1573300 0 2460400 5450900 5688 531 5776 25314;25315;25316;25317;25318;25319;25320;25321;25322 16737;16738;16739;16740;16741;16742 16737 5 NVFSSSGTSFSGRKIK FTVGSNGKNVFSSSGT SFSGRKIKTAVRRRK_ K N V I K T 0 1 1 0 0 0 0 2 0 1 0 2 0 2 0 5 1 0 0 1 0 16 2 1700.8846 P49790;F6QR24;Q4LE47 P49790 1453 1468 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 3 0.0073199 62.357 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 2 1 1 1 14545000 1091200 6921000 2874400 1334600 1160900 1163100 5689 531 5777 25323;25324;25325;25326;25327;25328;25329 16743;16744;16745 16744 3 NVGQFSGFPFEKGSVQYKK GTVSSLKKNVGQFSGF KGSVQYKKKEEMLKKF K N V K K K 0 0 1 0 0 2 1 3 0 0 0 3 0 3 1 2 0 0 1 2 0 19 2 2146.0847 P35659;P35659-2;B4DFG0;D6R9L5;D6RDA2;H0Y8X0 P35659 126 144 DEK Protein DEK yes no 3 0.0048712 53.255 By MS/MS By matching By matching By matching By matching By matching 1 5545400 5545400 0 0 0 0 0 5690 901 5778 25330 16746 16746 1 NVLLNSLQK HLINAEEKNVLLNSLQ VLLNSLQKEDKSPETG K N V Q K E 0 0 2 0 0 1 0 0 0 0 3 1 0 0 0 1 0 0 0 1 0 9 0 1027.6026 Q8NFC6 Q8NFC6 2463 2471 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 0.012883 80.688 By matching By MS/MS By matching By matching By matching By matching 1 1 1 8672100 0 2308700 0 1591100 0 4772400 5691 1325 5779 25331;25332;25333 16747 16747 1 NVLNHMTHCQSGK LPHCRTMKNVLNHMTH MTHCQSGKSCQVAHCA K N V G K S 0 0 2 0 1 1 0 1 2 0 1 1 1 0 0 1 1 0 0 1 0 13 0 1524.6926 Q09472 Q09472 374 386 EP300 Histone acetyltransferase p300 yes yes 3 0.0018594 70.628 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2179800 0 350960 0 535720 505080 788060 5692 1053 5780 25334;25335;25336;25337 16748 16748 1 NVMVEPHRHEGVFICR KRGNQSGKNVMVEPHR HEGVFICRGKEDALVT K N V C R G 0 2 1 0 1 0 2 1 2 1 0 0 1 1 1 0 0 0 0 3 0 16 1 1978.9618 P22087 P22087 85 100 FBL rRNA 2-O-methyltransferase fibrillarin yes yes 3;4 0.00078486 73.386 By matching By matching By matching By matching By MS/MS By MS/MS 1 2 2 45750000 0 0 0 3827900 22146000 19776000 5693 862 5781 25338;25339;25340;25341;25342 16749;16750;16751;16752 16749 4 NVMVEPHRHEGVFICRGK KRGNQSGKNVMVEPHR GVFICRGKEDALVTKN K N V G K E 0 2 1 0 1 0 2 2 2 1 0 1 1 1 1 0 0 0 0 3 0 18 2 2164.0782 P22087 P22087 85 102 FBL rRNA 2-O-methyltransferase fibrillarin yes yes 4 0.017462 38.808 By matching By matching By MS/MS By matching By matching By matching 1 1 8438500 0 0 3622700 4815700 0 0 5694 862 5782 25343;25344 16753 16753 1 NVQLVCSEHGLDNK TLYRGNSRNVQLVCSE SEHGLDNKIYPKNTKK R N V N K I 0 0 2 1 1 1 1 1 1 0 2 1 0 0 0 1 0 0 0 2 0 14 0 1611.7675 Q96QE3 Q96QE3 1425 1438 ATAD5 ATPase family AAA domain-containing protein 5 yes yes 3 0.0075993 51.726 By matching By matching By matching By matching By matching By MS/MS 1 1 2952100 0 1025500 0 0 0 1926600 5695 1415 5783 25345;25346 16754 16754 1 NVRGEFTYYEIQDNTGK GVFEVHKKNVRGEFTY EIQDNTGKMEVVVHGR K N V G K M 0 1 2 1 0 1 2 2 0 1 0 1 0 1 0 0 2 0 2 1 0 17 1 2032.949 Q16666-3;Q16666-2;Q16666;H3BLV7;E7EPR3 Q16666-3 585 601 IFI16 Gamma-interferon-inducible protein 16 yes no 3 3.1062E-21 101.28 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 20546000 0 1081000 6364200 2819700 5411500 4869200 5696 1155 5784 25347;25348;25349;25350;25351 16755;16756 16756 2 NVSCSSLSNSNSEPAK LERSELFKNVSCSSLS NSNSEPAKFMKNIGPP K N V A K F 1 0 3 0 1 0 1 0 0 0 1 1 0 0 1 6 0 0 0 1 0 16 0 1679.7421 Q9NR48-2;Q9NR48 Q9NR48-2 744 759 ASH1L Histone-lysine N-methyltransferase ASH1L yes no 2 0.0084668 46.249 By matching By matching By matching By matching By matching By MS/MS 1 1 906100 0 396370 0 0 0 509730 5697 1535 5785 25352;25353 16757 16757 1 NVSEELDRTPPEVSK SMEPNKQKNVSEELDR RTPPEVSKKLEDIRTR K N V S K K 0 1 1 1 0 0 3 0 0 0 1 1 0 0 2 2 1 0 0 2 0 15 1 1698.8424 Q15393-3;Q15393 Q15393-3 374 388 SF3B3 Splicing factor 3B subunit 3 yes no 2;3 0.0013599 69.045 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 1 2 26957000 0 7707500 4453500 1578000 0 13218000 5698 1136 5786 25354;25355;25356;25357;25358;25359;25360 16758;16759 16759 2 NVSEQMTNEDK GNNNWSEKNVSEQMTN EQMTNEDKSFGCPSVR K N V D K S 0 0 2 1 0 1 2 0 0 0 0 1 1 0 0 1 1 0 0 1 0 11 0 1293.5507 Q9H9A7 Q9H9A7 377 387 RMI1 RecQ-mediated genome instability protein 1 yes yes 2 0.0057163 71.153 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2403200 0 654340 697110 121010 0 930740 5699 1506 5787 25361;25362;25363;25364 16760;16761;16762 16762 3 NVSGISFTENMGSSQQK NTFNFGSKNVSGISFT NMGSSQQKNSGFRRSD K N V Q K N 0 0 2 0 0 2 1 2 0 1 0 1 1 1 0 4 1 0 0 1 0 17 0 1812.8312 P49792 P49792 1105 1121 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 2 2.7085E-21 101.92 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 22358000 6503700 1605500 4302300 814840 1832600 7298700 5700 945 5788 25365;25366;25367;25368;25369;25370 16763;16764;16765 16763 1 NVSTKPSNIVKYPEK GKPASVIKNVSTKPSN NIVKYPEKESEPSEKI K N V E K E 0 0 2 0 0 0 1 0 0 1 0 3 0 0 2 2 1 0 1 2 0 15 2 1702.9254 Q7Z6E9;Q7Z6E9-2;Q7Z6E9-4 Q7Z6E9 1351 1365 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 3 0.01402 54.09 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 9708900 1494500 2951900 1329600 1200400 2732500 0 5701 1255 5789 25371;25372;25373;25374;25375 16766;16767 16767 2 NVTPNSYAEPLAAPGGGERYSR ________________ GGGERYSRSAGMYMQS R N V S R S 3 2 2 0 0 0 2 3 0 0 1 0 0 0 3 2 1 0 2 1 0 22 1 2305.1087 Q9NYD6 Q9NYD6 6 27 HOXC10 Homeobox protein Hox-C10 yes yes 3 6.7001E-07 73.984 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 16004000 0 3510100 7212100 0 1065300 4216800 5702 1562 5790 25376;25377;25378;25379 16768;16769;16770 16770 3 NVTQIEPFCLETDRR NLPEKKVKNVTQIEPF FCLETDRRGALKAQTW K N V R R G 0 2 1 1 1 1 2 0 0 1 1 0 0 1 1 0 2 0 0 1 0 15 1 1876.9101 Q9ULW0;Q96RR5 Q9ULW0 586 600 TPX2;HCA90 Targeting protein for Xklp2 yes no 3 0.014656 40.278 By matching By matching By matching By matching By matching By MS/MS 1 39819000 0 0 0 0 0 39819000 5703 1611 5791 25380 16771 16771 1 NVTQIEPFCLETDRRGALK NLPEKKVKNVTQIEPF TDRRGALKAQTWKHQL K N V L K A 1 2 1 1 1 1 2 1 0 1 2 1 0 1 1 0 2 0 0 1 0 19 2 2246.1478 Q9ULW0;Q96RR5 Q9ULW0 586 604 TPX2;HCA90 Targeting protein for Xklp2 yes no 4 0.013338 39.338 By matching By MS/MS By matching By matching By matching By matching 1 16931000 0 16931000 0 0 0 0 5704 1611 5792 25381 16772 16772 1 NVVDSSQKPTPSAREDPAPK SKESSVVKNVVDSSQK AREDPAPKKSSSEPPP K N V P K K 2 1 1 2 0 1 1 0 0 0 0 2 0 0 4 3 1 0 0 2 0 20 2 2122.0655 Q03164-2;Q03164;E9PQG7;E9PR05 Q03164-2 1236 1255 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 3;4 0.0063642 51.798 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 1 1 1 6117200 1310500 1027000 1134600 0 1586800 1058100 5705 464 5793 25382;25383;25384;25385;25386;25387 16773;16774 16773 1 NVVLPTETEVAPAK ETDVSSAKNVVLPTET ETEVAPAKDVTLLKET K N V A K D 2 0 1 0 0 0 2 0 0 0 1 1 0 0 2 0 2 0 0 3 0 14 0 1466.7981 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0 350 363 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 7.881E-05 90.689 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 4039200 3048600 990550 0 0 0 0 5706 388 5794 25388;25389 16775;16776 16775 2 NVVLPTETEVAPAKDVTLLKETER ETDVSSAKNVVLPTET TLLKETERASPIKMDL K N V E R A 2 1 1 1 0 0 4 0 0 0 3 2 0 0 2 0 4 0 0 4 0 24 2 2651.4382 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0 350 373 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 4 0.0024857 48.597 By matching By matching By matching By matching By MS/MS By matching 1 4425500 0 0 0 0 4425500 0 5707 388 5795 25390 16777 16777 0 NVVMVNQGLTK PVMQHLAKNVVMVNQG MVNQGLTKHMVSQ___ K N V T K H 0 0 2 0 0 1 0 1 0 0 1 1 1 0 0 0 1 0 0 3 0 11 0 1201.6489 E9PC90;P14635 E9PC90 386 396 CCNB1 G2/mitotic-specific cyclin-B1 yes no 2 0.00043615 96.604 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 56706000 5104600 6381700 6566600 4710200 8910500 25033000 5708 413 5796 25391;25392;25393;25394;25395;25396 16778;16779;16780;16781 16780 4 NWNSSVPR LQNGPIRKNWNSSVPR NWNSSVPRSSDFEDSA K N W P R S 0 1 2 0 0 0 0 0 0 0 0 0 0 0 1 2 0 1 0 1 0 8 0 958.46208 O75319 O75319 207 214 DUSP11 RNA/RNP complex-1-interacting phosphatase yes yes 2 0.017081 82.279 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 10618000 0 189390 1431300 904000 2582100 5511000 5709 739 5797 25397;25398;25399;25400;25401 16782 16782 1 NYCDPQGHPSTGLK AVIFMTTKNYCDPQGH GHPSTGLKTTTPGPSL K N Y L K T 0 0 1 1 1 1 0 2 1 0 1 1 0 0 2 1 1 0 1 0 0 14 0 1572.6991 O60934;F5H3R2 O60934 321 334 NBN Nibrin yes no 2;3 0.000314 88.075 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 2 2 27456000 3018100 3347200 1349600 800390 8539600 10401000 5710 736 5798 25402;25403;25404;25405;25406;25407;25408;25409;25410 16783;16784;16785;16786;16787 16786 4 NYCDPQGHPSTGLKTTTPGPSLSQGVSVDEK AVIFMTTKNYCDPQGH QGVSVDEKLMPSAPVN K N Y E K L 0 0 1 2 1 2 1 4 1 0 2 2 0 0 4 4 4 0 1 2 0 31 1 3256.5306 O60934;F5H3R2 O60934 321 351 NBN Nibrin yes no 4 2.1713E-32 79.512 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 26449000 10217000 0 13777000 0 2455800 0 5711 736 5799 25411;25412;25413 16788;16789;16790 16790 3 NYEDEDSLKTLR IVGLQYKKNYEDEDSL EDSLKTLRYGKIMIMT K N Y L R Y 0 1 1 2 0 0 2 0 0 0 2 1 0 0 0 1 1 0 1 0 0 12 1 1481.6998 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5 P11388 521 532 TOP2A DNA topoisomerase 2-alpha yes no 3 0.029239 48.115 By matching By matching By matching By matching By matching By MS/MS 1 1 2507700 0 0 0 0 310790 2196900 5712 655 5800 25414;25415 16791 16791 1 NYEGTCEIPESK SFQLQSHKNYEGTCEI TCEIPESKYSPLGGPK K N Y S K Y 0 0 1 0 1 0 3 1 0 1 0 1 0 0 1 1 1 0 1 0 0 12 0 1425.6082 Q12968-5;Q12968-6;Q12968-4;I3L3K7;H3BR83;H3BRS1;Q12968-3;Q12968-2;Q12968 Q12968-5 85 96 NFATC3 Nuclear factor of activated T-cells, cytoplasmic 3 yes no 2 0.014783 55.04 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4531600 0 620860 0 812980 2117800 979890 5713 643 5801 25416;25417;25418;25419 16792 16792 1 NYGFVHIEDK VLECDIIKNYGFVHIE GFVHIEDKTAAEDAIR K N Y D K T 0 0 1 1 0 0 1 1 1 1 0 1 0 1 0 0 0 0 1 1 0 10 0 1220.5826 Q9BWF3;E9PB51;Q9BQ04;E7EQS3;Q9BWF3-3;D6R9K7;Q9BWF3-2;E9PLB0;E9PM61 Q9BWF3 36 45 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 2;3 0.010306 73.666 By matching By matching By MS/MS By matching By matching By matching 2 2 1 9231100 0 0 7368100 1464700 0 398320 5714 1457 5802 25420;25421;25422;25423;25424 16793;16794 16793 2 NYGGTVAVTESGHTCQR QCLKGTGKNYGGTVAV ESGHTCQRWSEQTPHK K N Y Q R W 1 1 1 0 1 1 1 3 1 0 0 0 0 0 0 1 3 0 1 2 0 17 0 1835.8221 CON__P06868 CON__P06868 289 305 yes yes 2;3 3.7876E-14 100.43 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 3 2 3 2 3 159640000 34410000 24430000 3516800 14139000 28297000 54844000 + 5715 295 5803 25425;25426;25427;25428;25429;25430;25431;25432;25433;25434;25435;25436;25437;25438;25439;25440;25441 16795;16796;16797;16798;16799;16800;16801;16802;16803;16804;16805;16806 16802 12 NYGSPLISGSTPK RPQMASSKNYGSPLIS LISGSTPKHERGSPSH K N Y P K H 0 0 1 0 0 0 0 2 0 1 1 1 0 0 2 3 1 0 1 0 0 13 0 1319.6721 Q15648 Q15648 1430 1442 MED1 Mediator of RNA polymerase II transcription subunit 1 yes yes 2 0.0098413 55.724 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 6283400 1074100 675220 1459100 814020 0 2261000 5716 1143 5804 25442;25443;25444;25445;25446 16807;16808;16809 16809 3 NYKEPEPAPNSVSITGSVDDHFAK HFRRSLGKNYKEPEPA SVDDHFAKALGDTWLQ K N Y A K A 2 0 2 2 0 0 2 1 1 1 0 2 0 1 3 3 1 0 1 2 0 24 1 2601.2347 Q14135-5;Q14135-6;G5E9M9;Q14135-2;Q14135;G5E9F4;Q14135-4;G5E9M7 Q14135-5 136 159 VGLL4 Transcription cofactor vestigial-like protein 4 yes no 4 5.5746E-09 66.711 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 16908000 3898900 8872500 0 4136700 0 0 5717 596 5805 25447;25448;25449 16810;16811 16811 2 NYLKERGDQTVLILHAK RLTREAMRNYLKERGD TVLILHAKVAQKSYGN R N Y A K V 1 1 1 1 0 1 1 1 1 1 3 2 0 0 0 0 1 0 1 1 0 17 2 1997.1058 Q06330;D6R927;Q06330-5;Q06330-4;Q06330-6;Q06330-7;D6RBQ8;D6RA45;D6RCM1;D6R946;D6RB37;D6REP3;D6RF98;D6RIV8;D6RAT2;D6RIZ8;D6R9X3;D6R9K5;D6REC2 Q06330 38 54 RBPJ Recombining binding protein suppressor of hairless yes no 4 0.0078235 44.312 By MS/MS By matching By matching By matching By matching By matching 1 3134400 3134400 0 0 0 0 0 5718 1042 5806 25450 16812 16812 1 NYSENTDKDLSR NSSQEKSKNYSENTDK NTDKDLSRRRSSRLST K N Y S R R 0 1 2 2 0 0 1 0 0 0 1 1 0 0 0 2 1 0 1 0 0 12 1 1440.6481 Q9BVI0;Q5JWZ0;Q5JXL1 Q9BVI0 314 325 PHF20 PHD finger protein 20 yes no 3 0.021578 51.463 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 2790700 471420 0 0 353710 938530 1027000 5719 1454 5807 25451;25452;25453;25454 16813 16813 1 NYSPRPESGTVSDAPQLKENPSTVGVER NVSSIWHRNYSPRPES PSTVGVERVISTKGLN R N Y E R V 1 2 2 1 0 1 3 2 0 0 1 1 0 0 4 4 2 0 1 3 0 28 2 3013.4741 Q9UQ84-4;Q9UQ84 Q9UQ84-4 374 401 EXO1 Exonuclease 1 yes no 4 2.1355E-07 57.21 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 12748000 2037000 3112400 1971600 0 2279200 3347300 5720 1624 5808 25455;25456;25457;25458;25459 16814;16815;16816;16817;16818;16819 16819 6 NYSPYYNTIDDLK KGPAAIQKNYSPYYNT YNTIDDLKDQIVDLTV K N Y L K D 0 0 2 2 0 0 0 0 0 1 1 1 0 0 1 1 1 0 3 0 0 13 0 1604.7359 P35527;CON__P35527 P35527 200 212 KRT9 Keratin, type I cytoskeletal 9 yes no 2 7.2969E-182 171.62 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 259010000 0 149330000 88317000 16108000 5257100 0 + 5721 899 5809 25460;25461;25462;25463 16820;16821;16822;16823 16823 4 NYTAYRQEPIASK IKVWDLRKNYTAYRQE RQEPIASKSFLYPGSS K N Y S K S 2 1 1 0 0 1 1 0 0 1 0 1 0 0 1 1 1 0 2 0 0 13 1 1539.7682 F5GZ90;Q9NZJ0 F5GZ90 206 218 DTL Denticleless protein homolog yes no 2 0.018378 58.595 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 3092700 0 752700 841980 189100 0 1308900 5722 499 5810 25464;25465;25466;25467 16824;16825;16826 16824 3 NYYQDTPKQIR KAMARDEKNYYQDTPK QDTPKQIRSKINVYKR K N Y I R S 0 1 1 1 0 2 0 0 0 1 0 1 0 0 1 0 1 0 2 0 0 11 1 1424.7048 Q9Y3C1 Q9Y3C1 139 149 NOP16 Nucleolar protein 16 yes yes 3 0.0055249 72.2 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 7321600 2271300 1366900 953380 917970 1812000 0 5723 1645 5811 25468;25469;25470;25471;25472 16827 16827 1 PAGPVQAVPPPPPVPTEPKQPTEEEASSK ________________ TEEEASSKEDSAPSKP M P A S K E 3 0 0 0 0 2 4 1 0 0 0 2 0 0 10 2 2 0 0 3 0 29 1 2960.5131 Q15459;E9PAW1;F8WB66 Q15459 2 30 SF3A1 Splicing factor 3A subunit 1 yes no 3 0.00010741 47.331 By matching By MS/MS By matching By matching By matching By matching 1 1 8434800 0 6387800 0 2047000 0 0 5724 1138 5812 25473;25474 16828 16828 1 PAYHSSLMDPDTK ________________ SLMDPDTKLIGNMALL M P A T K L 1 0 0 2 0 0 0 0 1 0 1 1 1 0 2 2 1 0 1 0 0 13 0 1460.6606 C9JZD1;B4DM63;O15145 C9JZD1 2 14 ARPC3 Actin-related protein 2/3 complex subunit 3 yes no 3 0.0034783 62.528 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2273600 0 777470 0 0 0 1496200 5725 103 5813 25475;25476 16829;16830 16830 2 PCSEETPAISPSK ________________ TPAISPSKRARPAEVG M P C S K R 1 0 0 0 1 0 2 0 0 1 0 1 0 0 3 3 1 0 0 0 0 13 0 1401.6446 H0Y477;H0YNJ9;P33316-2 H0Y477 2 14 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial yes no 2 3.104E-15 107.46 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 5587900 890480 819000 1019500 459700 910990 1488200 5726 609 5814 25477;25478;25479;25480;25481;25482 16831;16832;16833;16834 16831 4 PEFLEDPSVLTKDKLK ________________ VLTKDKLKSELVANNV M P E L K S 0 0 0 2 0 0 2 0 0 0 3 3 0 1 2 1 1 0 0 1 0 16 2 1858.0088 P42166;P42167;P42167-2;G5E972 P42166 2 17 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 3;4 0 280.5 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 3 2 2 2 1944900000 488490000 274860000 266270000 170230000 407700000 337310000 5727 913;914 5815 25483;25484;25485;25486;25487;25488;25489;25490;25491;25492;25493;25494;25495;25496;25497 16835;16836;16837;16838;16839;16840;16841;16842;16843;16844;16845;16846;16847;16848 16836 14 PERDSEPFSNPLAPDGHDVDDPHSFHQSK ________________ PHSFHQSKLTNEDFRK M P E S K L 1 1 1 5 0 1 2 1 3 0 1 1 0 2 5 4 0 0 0 1 0 29 1 3256.4446 Q13123;Q9H4P6;E7EQZ7;D6RAY9 Q13123 2 30 IK Protein Red yes no 6 0.031657 15.213 By matching By matching By MS/MS By matching By matching By matching 1 6339300 0 0 6339300 0 0 0 5728 1071 5816 25498 16849 16849 0 PETLGELQKLGIK SLRISTRRPETLGELQ ELQKLGIKCFYHNADL R P E I K C 0 0 0 0 0 1 2 2 0 1 3 2 0 0 1 0 1 0 0 0 0 13 1 1424.8239 G3V2D4;Q6NXP6-2;Q6NXP6 G3V2D4 113 125 NOXRED1 NADP-dependent oxidoreductase domain-containing protein 1 yes no 3 0.0066383 59.198 By MS/MS By matching By matching By matching By matching By matching 1 2502600 2502600 0 0 0 0 0 5729 582 5817 25499 16850 16850 1 PGETEEPRPPEQQDQEGGEAAK ________________ QEGGEAAKAAPEEPQQ M P G A K A 2 1 0 1 0 3 6 3 0 0 0 1 0 0 4 0 1 0 0 0 0 22 1 2378.0622 Q96JP5-2;H9KV86;Q96JP5 Q96JP5-2 2 23 ZFP91 E3 ubiquitin-protein ligase ZFP91 yes no 3 1.4675E-158 145.43 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 2 1 1 2 2 60343000 8005000 11331000 12052000 5912000 6009900 17033000 5730 677 5818 25500;25501;25502;25503;25504;25505;25506;25507;25508;25509 16851;16852;16853;16854;16855;16856 16856 6 PGFTCCVPGCYNNSHRDK ________________ YNNSHRDKALHFYTFP M P G D K A 0 1 2 1 3 0 0 2 1 0 0 1 0 1 2 1 1 0 1 1 0 18 1 2167.8986 Q96EK4 Q96EK4 2 19 THAP11 THAP domain-containing protein 11 yes yes 3;4 4.4272E-14 99.238 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 2 2 2 1 2 58504000 5008500 11821000 15095000 6283200 5601600 14694000 5731 1381 5819 25510;25511;25512;25513;25514;25515;25516;25517;25518;25519 16857;16858;16859;16860;16861;16862;16863;16864 16862 8 PGPTPSGTNVGSSGRSPSK ________________ SSGRSPSKAVAARAAG M P G S K A 0 1 1 0 0 0 0 4 0 0 0 1 0 0 4 5 2 0 0 1 0 19 1 1768.8704 P60468 P60468 2 20 SEC61B Protein transport protein Sec61 subunit beta yes yes 3 2.3529E-65 122.46 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 56763000 12144000 6594800 8259900 6333800 11995000 11436000 5732 978 5820 25520;25521;25522;25523;25524;25525;25526 16865;16866;16867;16868;16869 16866 5 PHAFKPGDLVFAK ________________ PGDLVFAKMKGYPHWP M P H A K M 2 0 0 1 0 0 0 1 1 0 1 2 0 2 2 0 0 0 0 1 0 13 1 1425.7769 Q7Z4V5-2;Q7Z4V5;I3L080 Q7Z4V5-2 2 14 HDGFRP2 Hepatoma-derived growth factor-related protein 2 yes no 3 0.0014556 89.189 By matching By matching By matching By matching By matching By MS/MS 1 3572100 0 0 0 0 0 3572100 5733 1252 5821 25527 16870 16870 1 PHVNVGTIGHVDHGK KKTYVRDKPHVNVGTI IGHVDHGKTTLTAAIT K P H G K T 0 0 1 1 0 0 0 3 3 1 0 1 0 0 1 0 1 0 0 3 0 15 0 1565.8063 P49411;H3BNU3 P49411 56 70 TUFM Elongation factor Tu, mitochondrial yes no 3 4.4996E-125 152.88 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 1 1 1 1 123300000 26357000 19056000 23632000 22237000 13971000 18042000 5734 935 5822 25528;25529;25530;25531;25532;25533;25534;25535 16871;16872;16873;16874;16875;16876;16877;16878 16875 8 PLPEPSEQEGESVK ________________ EQEGESVKASQEPSPK M P L V K A 0 0 0 0 0 1 4 1 0 0 1 1 0 0 3 2 0 0 0 1 0 14 0 1524.7308 Q96CP2;I3L1Y9;I3L4I0;I3L0R3;I3L231;Q4VC44-2;Q4VC44;Q4VC44-3 Q96CP2 2 15 FLYWCH2;FLYWCH1 FLYWCH family member 2;FLYWCH-type zinc finger-containing protein 1 no no 2;3 4.4769E-124 151.66 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 2 2 199530000 28921000 41101000 29004000 20019000 2977000 77503000 5735 683;1171 5823 25536;25537;25538;25539;25540;25541;25542;25543;25544 16879;16880;16881;16882;16883;16884;16885;16886 16886 8 PMFIVNTNVPR ________________ IVNTNVPRASVPDGFL M P M P R A 0 1 2 0 0 0 0 0 0 1 0 0 1 1 2 0 1 0 0 2 0 11 0 1286.6805 P14174 P14174 2 12 MIF Macrophage migration inhibitory factor yes yes 2 0.030011 91.313 By matching By MS/MS By matching By matching By matching By matching 1 10895000 0 10895000 0 0 0 0 5736 836 5824 25545 16887 16887 0 PNFCAAPNCTRK ________________ AAPNCTRKSTQSDLAF M P N R K S 2 1 2 0 2 0 0 0 0 0 0 1 0 1 2 0 1 0 0 0 0 12 1 1434.6496 E9PSI2;O43422-2;O43422 E9PSI2 2 13 PRKRIR 52 kDa repressor of the inhibitor of the protein kinase yes no 3 0.0009608 84.169 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 5369100 668190 549770 819600 1353200 956650 1021700 5737 472 5825 25546;25547;25548;25549;25550;25551 16888;16889;16890;16891 16890 4 PNTGCFEPFVLYFPDYSIGNLQK EIVWEKFRPNTGCFEP YSIGNLQKILSHDHPP R P N Q K I 0 0 2 1 1 1 1 2 0 1 2 1 0 3 3 1 1 0 2 1 0 23 0 2705.2836 O43913;B4DXT8;O43913-2 O43913 167 189 ORC5 Origin recognition complex subunit 5 yes no 3 0.0042093 48.919 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 5738 724 5826 25552 16892 16892 1 PQNPSAIYEESNPK LAGPRRRRPQNPSAIY IYEESNPKDPAAVTES R P Q P K D 1 0 2 0 0 1 2 0 0 1 0 1 0 0 3 2 0 0 1 0 0 14 0 1572.742 Q8TCT9-2 Q8TCT9-2 388 401 yes yes 3 0.0066917 52.576 By MS/MS By matching By matching By matching By matching By matching 1 2891500 2891500 0 0 0 0 0 5739 1334 5827 25553 16893 16893 1 PQYQTWEEFSR ________________ QTWEEFSRAAEKLYLA M P Q S R A 0 1 0 0 0 2 2 0 0 0 0 0 0 1 1 1 1 1 1 0 0 11 0 1469.6575 P49458;E9PE20;P49458-2 P49458 2 12 SRP9 Signal recognition particle 9 kDa protein yes no 2 0 215.72 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 695910000 143520000 129320000 85662000 93531000 63166000 180710000 5740 937 5828 25554;25555;25556;25557;25558;25559 16894;16895;16896;16897;16898;16899 16898 6 PQYQTWEEFSRAAEK ________________ EFSRAAEKLYLADPMK M P Q E K L 2 1 0 0 0 2 3 0 0 0 0 1 0 1 1 1 1 1 1 0 0 15 1 1868.8693 P49458;E9PE20;P49458-2 P49458 2 16 SRP9 Signal recognition particle 9 kDa protein yes no 2;3 0 221.85 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 2 2 1 2 1045000000 159910000 195410000 390410000 182590000 116700000 0 5741 937 5829 25560;25561;25562;25563;25564;25565;25566;25567 16900;16901;16902;16903;16904 16900 5 PSETPQAEVGPTGCPHRSGPHSAK ________________ RSGPHSAKGSLEKGSP M P S A K G 2 1 0 0 1 1 2 3 2 0 0 1 0 0 5 3 2 0 0 1 0 24 1 2483.1612 P35520;P35520-2;C9JMA6 P35520 2 25 CBS Cystathionine beta-synthase;Cysteine synthase yes no 4;5 0.00080123 54.875 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 4 2 2 2 2 2 21998000 5812300 2769100 4720900 2826400 2942800 2926500 5742 898 5830 25568;25569;25570;25571;25572;25573;25574;25575;25576;25577;25578;25579;25580;25581 16905;16906;16907;16908;16909;16910;16911;16912 16907 7 PSKGPLQSVQVFGR ________________ QSVQVFGRKKTATAVA M P S G R K 0 1 0 0 0 2 0 2 0 0 1 1 0 1 2 2 0 0 0 2 0 14 1 1498.8256 P62249;Q6IPX4 P62249 2 15 RPS16 40S ribosomal protein S16 yes no 3 1.4202E-20 112.02 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 44244000 16754000 6565400 4253900 0 6650700 10019000 5743 986 5831 25582;25583;25584;25585;25586 16913;16914;16915;16916;16917 16914 5 PTTVLLAR P T A R 1 1 0 0 0 0 0 0 0 0 2 0 0 0 1 0 2 0 0 1 0 8 0 869.53345 REV__Q8WX94 yes no 2 0.014817 87.323 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 2 1 2 2 2 21075000000 3804800000 2702800000 4056400000 5286100000 5225000000 0 + 5744 1670 5832 25587;25588;25589;25590;25591;25592;25593;25594;25595 16918;16919;16920;16921;16922 16921 5 QAAAAAAAAAATAAWTGTTFTK QQQQQQQKQAAAAAAA WTGTTFTKKAPFQNKQ K Q A T K K 12 0 0 0 0 1 0 1 0 0 0 1 0 1 0 0 5 1 0 0 0 22 0 2022.0171 Q96KR1;B5MEH6 Q96KR1 289 310 ZFR Zinc finger RNA-binding protein yes no 2 2.0365E-74 121.33 By matching By matching By matching By MS/MS By matching By matching 1 1670000 0 0 0 1670000 0 0 5745 1403 5833 25596 16923 16923 1 QAAGGLRAELLR REELEQSKQAAGGLRA GLRAELLRAQRELGEL K Q A L R A 3 2 0 0 0 1 1 2 0 0 3 0 0 0 0 0 0 0 0 0 0 12 1 1253.7204 Q14980-2;Q14980;F5H2L0;H0YFY6 Q14980-2 1390 1401 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.0035565 69.721 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 13317000 0 3158300 2275400 1007200 0 6876400 5746 1121 5834 25597;25598;25599;25600 16924;16925 16925 2 QAANLQDCYR RLAKKFQRQAANLQDC ANLQDCYRLYQGINQL R Q A Y R L 2 1 1 1 1 2 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 10 0 1237.551 B4E2Z2;P43246;E9PHA6;E7EU21;B4DL39;B4DSB9;E7EQQ1;E9PCI8 B4E2Z2 331 340 MSH2 DNA mismatch repair protein Msh2 yes no 2 0.0029216 94.465 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 3834100 383160 503680 0 0 1063200 1884100 5747 162 5835 25601;25602;25603;25604 16926;16927 16926 2 QAARRPFVAINYAAIR CKNTLRLRQAARRPFV AINYAAIRAECKMLLN R Q A I R A 5 3 1 0 0 1 0 0 0 2 0 0 0 1 1 0 0 0 1 1 0 16 2 1816.022 E7EQY4;Q9BTC8-2;D6W5A2;F8W8M8;E7EV10;Q9BTC8 E7EQY4 490 505 MTA3 Metastasis-associated protein MTA3 yes no 4 0.00209 60.937 By matching By matching By matching By matching By matching By MS/MS 1 7797300 0 0 0 0 0 7797300 5748 331 5836 25605 16928 16928 1 QAASGLVGQENAR LDESGLAKQAASGLVG LVGQENAREACGVIVE K Q A A R E 3 1 1 0 0 2 1 2 0 0 1 0 0 0 0 1 0 0 0 1 0 13 0 1299.6531 Q9Y265;Q9Y265-2 Q9Y265 34 46 RUVBL1 RuvB-like 1 yes no 2 5.2096E-24 115.37 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 2 1 1 1 1 1 40927000 8566800 4007900 4273300 3135700 9680700 11263000 5749 1629 5837 25606;25607;25608;25609;25610;25611;25612 16929;16930;16931;16932;16933 16931 5 QAEEQIEHLQRK EDALRRIRQAEEQIEH QIEHLQRKLGATKQEE R Q A R K L 1 1 0 0 0 3 3 0 1 1 1 1 0 0 0 0 0 0 0 0 0 12 1 1507.7743 O75150-4;H3BP71;O75150;F8W8Z4;F6SYU7;Q6ZN99;O75150-3 O75150-4 632 643 RNF40 E3 ubiquitin-protein ligase BRE1B yes no 3 0.0058579 57.885 By matching By matching By matching By matching By matching By MS/MS 1 1 1 7037800 0 775250 594900 0 0 5667600 5750 634 5838 25613;25614;25615 16934 16934 1 QAEPELDLR LSASLGTRQAEPELDL AEPELDLRSIKEVDEA R Q A L R S 1 1 0 1 0 1 2 0 0 0 2 0 0 0 1 0 0 0 0 0 0 9 0 1069.5404 G5E9D3;P20810-5;E7ESM9;P20810-7;P20810-6;B7Z468;F8W7E0;H0Y7F0;P20810-3;E9PDE4;E7ES10;P20810-4;E9PCH5;G5E946;B7Z574;P20810-2;P20810;H0Y9H6;E7EVY3;E7EQ12;D6RAA8;D6RC54 G5E9D3 344 352 CAST Calpastatin yes no 2 4.9295E-12 122.96 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 11267000 0 0 1194800 781580 2004200 7286200 5751 375 5839 25616;25617;25618;25619 16935 16935 1 QAGEAHMAADGETNGSCENSDASSHANAAK ADEGSAEKQAGEAHMA SSHANAAKHTQDSARV K Q A A K H 8 0 3 2 1 1 3 3 2 0 0 1 1 0 0 4 1 0 0 0 0 30 0 2987.2006 Q9H9B1-3;Q9H9B1;Q9H9B1-4;C9JD67;Q9H9B1-2 Q9H9B1-3 42 71 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes no 4 0.023479 25.016 By matching By matching By MS/MS By matching By matching By matching 1 1 1 4124700 0 1438600 1354500 0 1331600 0 5752 1507 5840 25620;25621;25622 16936 16936 1 QAGIGGEPAAAGAGCSPRPK PCPPPATKQAGIGGEP AGCSPRPKYQAVLPIQ K Q A P K Y 5 1 0 0 1 1 1 5 0 1 0 1 0 0 3 1 0 0 0 0 0 20 1 1850.9057 Q68DK7 Q68DK7 111 130 MSL1 Male-specific lethal 1 homolog yes yes 3 0.00010876 70.02 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 21514000 2343300 4465700 3432000 2059700 3843200 5370300 5753 1218 5841 25623;25624;25625;25626;25627;25628 16937;16938;16939;16940;16941 16941 5 QAGPAPAAATAASK SSGASAARQAGPAPAA AAATAASKKFPGSAAL R Q A S K K 7 0 0 0 0 1 0 1 0 0 0 1 0 0 2 1 1 0 0 0 0 14 0 1210.6306 Q9BTC0;Q9BTC0-1 Q9BTC0 613 626 DIDO1 Death-inducer obliterator 1 yes no 2 0.0011067 73.802 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 27554000 2764200 3802300 4823700 2277000 4238000 9648500 5754 1447 5842 25629;25630;25631;25632;25633;25634 16942;16943;16944;16945;16946 16944 5 QAGVAIGRLCEK PDLIFCRKQAGVAIGR AIGRLCEKCDGKCVIC K Q A E K C 2 1 0 0 1 1 1 2 0 1 1 1 0 0 0 0 0 0 0 1 0 12 1 1300.6922 Q7RTV0 Q7RTV0 14 25 PHF5A PHD finger-like domain-containing protein 5A yes yes 2;3 0.0016414 93.839 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 3 2 1 2 2 2 23819000 3215600 3062600 1881200 1974700 7536300 6148100 5755 1246 5843 25635;25636;25637;25638;25639;25640;25641;25642;25643;25644;25645;25646 16947;16948;16949;16950;16951;16952 16950 5 QALAWMVSRENSK TPLLPHQKQALAWMVS MVSRENSKELPPFWEQ K Q A S K E 2 1 1 0 0 1 1 0 0 0 1 1 1 0 0 2 0 1 0 1 0 13 1 1518.7613 Q14527;Q14527-2;E7ESN4;F5H3D6 Q14527 246 258 HLTF Helicase-like transcription factor yes no 2;3 0.0022764 66.023 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 2 12604000 0 1903500 6055700 0 0 4645300 5756 1107 5844 25647;25648;25649;25650 16953;16954;16955;16956 16954 4 QALEASNRIQESK QEIEKFQKQALEASNR SNRIQESKNQCTQVVQ K Q A S K N 2 1 1 0 0 2 2 0 0 1 1 1 0 0 0 2 0 0 0 0 0 13 1 1472.7583 P15924 P15924 1790 1802 DSP Desmoplakin yes yes 3 0.026375 46.069 By matching By MS/MS By matching By matching By matching By matching 1 1 1390400 0 809040 0 0 581360 0 5757 840 5845 25651;25652 16957 16957 1 QALVGSDSAEDEK ERKKKCHKQALVGSDS SDSAEDEKRKRKCQKH K Q A E K R 2 0 0 2 0 1 2 1 0 0 1 1 0 0 0 2 0 0 0 1 0 13 0 1347.6154 E9PPY3;O43159 E9PPY3 119 131 RRP8 Ribosomal RNA-processing protein 8 yes no 2 7.6269E-10 106.29 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 39822000 3856000 8281700 10091000 184630 6128700 11279000 5758 462 5846 25653;25654;25655;25656;25657;25658;25659 16958;16959;16960;16961;16962;16963;16964 16958 7 QALVGSDSAEDEKR ERKKKCHKQALVGSDS DSAEDEKRKRKCQKHA K Q A K R K 2 1 0 2 0 1 2 1 0 0 1 1 0 0 0 2 0 0 0 1 0 14 1 1503.7165 E9PPY3;O43159 E9PPY3 119 132 RRP8 Ribosomal RNA-processing protein 8 yes no 3 0.011601 44.246 By matching By matching By matching By matching By matching By MS/MS 1 1 1099300 0 0 0 0 311570 787730 5759 462 5847 25660;25661 16965 16965 1 QALVGSDSAEDEKRK ERKKKCHKQALVGSDS SAEDEKRKRKCQKHAP K Q A R K R 2 1 0 2 0 1 2 1 0 0 1 2 0 0 0 2 0 0 0 1 0 15 2 1631.8115 E9PPY3;O43159 E9PPY3 119 133 RRP8 Ribosomal RNA-processing protein 8 yes no 3;4 3.4818E-08 98.943 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 2 2 2 2 2 27727000 858060 3498700 5763700 1897700 3652200 12056000 5760 462 5848 25662;25663;25664;25665;25666;25667;25668;25669;25670;25671;25672 16966;16967;16968;16969;16970 16967 5 QAMLENASDIKLEK SQAEMSSRQAMLENAS ASDIKLEKFSISAHGK R Q A E K F 2 0 1 1 0 1 2 0 0 1 2 2 1 0 0 1 0 0 0 0 0 14 1 1588.8131 E9PC67;F8VQZ0;Q5STZ8;Q8NE71;Q8NE71-2;H0YGW7 Q8NE71 295 308 ABCF1 ATP-binding cassette sub-family F member 1 no no 3 0.0015122 82.515 By matching By matching By matching By matching By matching By MS/MS 1 1 1 8343300 0 1627200 0 2320500 0 4395700 5761 1321;411 5849 25673;25674;25675 16971;16972 16972 2 QAMQGMPVRNTGSPK RVRSHVSRQAMQGMPV VRNTGSPKSAVKTRQA R Q A P K S 1 1 1 0 0 2 0 2 0 0 0 1 2 0 2 1 1 0 0 1 0 15 1 1600.7814 E7EQY4;Q9BTC8-2;D6W5A2;F8W8M8;E7EV10;Q9BTC8 E7EQY4 444 458 MTA3 Metastasis-associated protein MTA3 yes no 3 0.0069309 50.659 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5932300 204720 0 1099700 0 0 4627900 5762 331 5850 25676;25677;25678 16973 16973 1 QAPAPTVIRDPPSITPAVKSPLPGPSEEK GTTPPQARQAPAPTVI LPGPSEEKTLQPSSQN R Q A E K T 3 1 0 1 0 1 2 1 0 2 1 2 0 0 8 3 2 0 0 2 0 29 2 2978.6077 Q13112 Q13112 439 467 CHAF1B Chromatin assembly factor 1 subunit B yes yes 4 0.0023698 34.966 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 79073000 0 8842300 34286000 18284000 0 17661000 5763 1069 5851 25679;25680;25681;25682 16974;16975;16976 16974 3 QAPQPQSSLQR IMRHHTLRQAPQPQSS QPQSSLQRGIPTSARS R Q A Q R G 1 1 0 0 0 4 0 0 0 0 1 0 0 0 2 2 0 0 0 0 0 11 0 1238.6367 Q8WXI9 Q8WXI9 510 520 GATAD2B Transcriptional repressor p66-beta yes yes 2 0.014059 60.08 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 42306000 0 0 11297000 524790 1363000 29121000 5764 1344 5852 25683;25684;25685;25686 16977 16977 1 QAQAADKMKEQEDLAK TCFNEIEKQAQAADKM KEQEDLAKVVSKEESI K Q A A K V 4 0 0 2 0 3 2 0 0 0 1 3 1 0 0 0 0 0 0 0 0 16 2 1802.8833 H0Y6A0;C9JZR4;E9PB03;Q9NP61 H0Y6A0 95 110 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes no 3 0.011157 52.966 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 3574400 682160 0 857040 757080 776480 501610 5765 276 5853 25687;25688;25689;25690;25691 16978 16978 1 QAQLAQTLQQQEQASQGLR LKQQAKEKQAQLAQTL EQASQGLRHQVEQLSS K Q A L R H 3 1 0 0 0 8 1 1 0 0 3 0 0 0 0 1 1 0 0 0 0 19 0 2125.0876 Q14980-2;Q14980;F5H4J1;F5H6Y5 Q14980-2 532 550 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 7.1974E-38 108.97 By matching By MS/MS By matching By matching By matching By matching 1 5589500 0 5589500 0 0 0 0 5766 1121 5854 25692 16979 16979 1 QARPPDASAARGGEDTNDLQQK NINKFERRQARPPDAS DTNDLQQKLEEVRQPP R Q A Q K L 4 2 1 3 0 3 1 2 0 0 1 1 0 0 2 1 1 0 0 0 0 22 2 2324.1105 B7ZM82;B3KVH1;O95785;O95785-2 B7ZM82 853 874 WIZ Protein Wiz yes no 3;4 0.013457 45.916 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 2 2 1 2 1 50656000 6343100 8828500 10728000 4644500 13206000 6904800 5767 212 5855 25693;25694;25695;25696;25697;25698;25699;25700;25701;25702 16980;16981;16982;16983;16984;16985 16985 6 QASQGMVGQLAAR LDDALEPRQASQGMVG MVGQLAARRAAGVVLE R Q A A R R 3 1 0 0 0 3 0 2 0 0 1 0 1 0 0 1 0 0 0 1 0 13 0 1315.6667 Q9Y230 Q9Y230 41 53 RUVBL2 RuvB-like 2 yes yes 2 0.0094432 56.139 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 3768400 0 563970 0 0 1027700 2176700 5768 1627 5856 25703;25704;25705 16986;16987 16986 2 QAVAISGGQILVAK SALPSTVKQAVAISGG GGQILVAKASSSVSKA K Q A A K A 3 0 0 0 0 2 0 2 0 2 1 1 0 0 0 1 0 0 0 2 0 14 0 1353.798 Q9ULM3 Q9ULM3 665 678 YEATS2 YEATS domain-containing protein 2 yes yes 2 0.0011071 72.615 By matching By MS/MS By matching By matching By matching By matching 1 1 11347000 0 9843300 0 1504000 0 0 5769 1609 5857 25706;25707 16988 16988 1 QAVCSNGHIWLR ILPFTDRKQAVCSNGH SNGHIWLRCFLTYQSC K Q A L R C 1 1 1 0 1 1 0 1 1 1 1 0 0 0 0 1 0 1 0 1 0 12 0 1439.7092 Q9UKN8 Q9UKN8 761 772 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 3 0.012097 55.258 By matching By matching By matching By matching By matching By MS/MS 1 1 7618400 0 0 0 0 2386400 5232000 5770 1602 5858 25708;25709 16989 16989 1 QAVDSPAASFCR PRHIPRHRQAVDSPAA SPAASFCRGLLSQPGP R Q A C R G 3 1 0 1 1 1 0 0 0 0 0 0 0 1 1 2 0 0 0 1 0 12 0 1307.5928 Q9H6R4-4;Q9H6R4;G8JLK7;F5H6M7 Q9H6R4-4 1021 1032 NOL6 Nucleolar protein 6 yes no 2 3.0473E-07 102.97 By matching By matching By matching By matching By matching By MS/MS 1 1 9396700 0 0 0 0 3076100 6320600 5771 1497 5859 25710;25711 16990 16990 1 QAVFFVGQSAR SYFGVGGKQAVFFVGQ FFVGQSARMISKPADS K Q A A R M 2 1 0 0 0 2 0 1 0 0 0 0 0 2 0 1 0 0 0 2 0 11 0 1208.6302 A6NHR9;A6NHR9-2 A6NHR9 241 251 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes no 2 0.022684 54.023 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 35645000 18019000 0 0 0 0 17627000 5772 23 5860 25712;25713 16991;16992 16991 2 QAVGGAGPPNPAINGSAPR VQNLDKARQAVGGAGP AINGSAPRDLFDMKPF R Q A P R D 4 1 2 0 0 1 0 4 0 1 0 0 0 0 4 1 0 0 0 1 0 19 0 1729.886 H0Y539;E9PFM5;P29353-5;P29353-3;P29353-2;P29353-7;B4DL02;P29353;P29353-6 H0Y539 102 120 SHC1 SHC-transforming protein 1 yes no 2 1.6948E-10 92.096 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 5256500 0 1207800 492890 0 518510 3037300 5773 94 5861 25714;25715;25716;25717 16993;16994;16995;16996 16996 3 QAVNNFKNETGYTK LIANKFLRQAVNNFKN KNETGYTKRLRKQLPP R Q A T K R 1 0 3 0 0 1 1 1 0 0 0 2 0 1 0 0 2 0 1 1 0 14 1 1612.7845 Q7Z6E9;Q7Z6E9-2;Q7Z6E9-4;H3BSK8 Q7Z6E9 317 330 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 3 0.013886 48.214 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 2915800 0 451240 1151400 574550 0 738540 5774 1255 5862 25718;25719;25720;25721 16997 16997 1 QCEINYVK EEDKGNVKQCEINYVK QCEINYVKKFQSFQDH K Q C V K K 0 0 1 0 1 1 1 0 0 1 0 1 0 0 0 0 0 0 1 1 0 8 0 1052.4961 Q14331;E9PLY7;Q9BZ01 Q14331 204 211 FRG1;FRG1B Protein FRG1;Protein FRG1B yes no 2 0.034536 69.825 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3789500 0 0 467630 0 1116800 2205000 5775 1106 5863 25722;25723;25724 16998 16998 1 QCIRENGNVAKTPR SASPPLRRQCIRENGN GNVAKTPRNTYKMTSL R Q C P R N 1 2 2 0 1 1 1 1 0 1 0 1 0 0 1 0 1 0 0 1 0 14 2 1641.8369 P46013;F5H4V4;P46013-2 P46013 833 846 MKI67 Antigen KI-67 no no 3;4 0.0010646 88.224 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 1 1 2 1 28141000 3302400 7423000 2980600 669380 4841400 8924400 5776 919;920 5864 25725;25726;25727;25728;25729;25730;25731;25732;25733 16999;17000;17001;17002;17003;17004 17001 6 QCSELGICAVSVGPK HAHSLVGKQCSELGIC CAVSVGPKDMTAQFNN K Q C P K D 1 0 0 0 2 1 1 2 0 1 1 1 0 0 1 2 0 0 0 2 0 15 0 1603.7698 Q00653-3;Q00653-4;Q00653 Q00653-3 113 127 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes no 2 1.216E-55 125.39 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 87759000 12658000 40469000 7434800 6002300 4232100 16962000 5777 1021 5865 25734;25735;25736;25737;25738;25739 17005;17006;17007;17008;17009;17010 17009 4 QDAQSLHGDIPQK LSQNSAIKQDAQSLHG LHGDIPQKQREITLKG K Q D Q K Q 1 0 0 2 0 3 0 1 1 1 1 1 0 0 1 1 0 0 0 0 0 13 0 1435.7056 Q9NR30;Q9NR30-2 Q9NR30 462 474 DDX21 Nucleolar RNA helicase 2 yes no 3 0.0093036 54.343 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 3440400 0 994030 0 0 1410700 1035700 5778 1534 5866 25740;25741;25742 17011;17012 17011 2 QDAQSLHGDIPQKQR LSQNSAIKQDAQSLHG GDIPQKQREITLKGFR K Q D Q R E 1 1 0 2 0 4 0 1 1 1 1 1 0 0 1 1 0 0 0 0 0 15 1 1719.8652 Q9NR30;Q9NR30-2 Q9NR30 462 476 DDX21 Nucleolar RNA helicase 2 yes no 3;4 0.0025803 61.657 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2 2 1 2 13261000 1670400 1302600 2014600 931600 3559800 3782400 5779 1534 5867 25743;25744;25745;25746;25747;25748;25749;25750;25751 17013;17014;17015 17015 3 QDAQVVLYR IKSELKMKQDAQVVLY DAQVVLYRSYRHGDLP K Q D Y R S 1 1 0 1 0 2 0 0 0 0 1 0 0 0 0 0 0 0 1 2 0 9 0 1090.5771 P78527;E7EUY0;P78527-2 P78527 2765 2773 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 1.8635E-69 152.11 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 1 1 1 1 1 43673000 5417400 3461200 3124900 1806800 9847700 20015000 5780 1012 5868 25752;25753;25754;25755;25756;25757;25758 17016;17017;17018;17019 17016 4 QDGGTAPVASASPK KLKSPSQKQDGGTAPV PVASASPKLCLAWQGM K Q D P K L 3 0 0 1 0 1 0 2 0 0 0 1 0 0 2 2 1 0 0 1 0 14 0 1284.631 Q96T37-2;Q96T37-3;Q96T37 Q96T37-2 770 783 RBM15 Putative RNA-binding protein 15 yes no 2 3.9657E-13 105.58 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 6056900 834520 661620 983000 471530 1087300 2018900 5781 1421 5869 25759;25760;25761;25762;25763;25764 17020;17021;17022 17021 3 QDIEDTASDAK APPAKAAKQDIEDTAS EDTASDAKRKRGRPRK K Q D A K R 2 0 0 3 0 1 1 0 0 1 0 1 0 0 0 1 1 0 0 0 0 11 0 1191.5255 F8W689;P48382;B7Z848 F8W689 453 463 RFX5 DNA-binding protein RFX5 yes no 2 2.9028E-05 103.21 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 5893500 0 870450 1258800 455110 1316000 1993100 5782 553 5870 25765;25766;25767;25768;25769 17023;17024;17025;17026 17024 4 QDPSYYLK DPDEEKAKQDPSYYLK QDPSYYLKNTNAETRE K Q D L K N 0 0 0 1 0 1 0 0 0 0 1 1 0 0 1 1 0 0 2 0 0 8 0 1012.4866 Q13356;Q13356-2;E7EW80 Q13356 191 198 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes no 2 0.037841 68.846 By matching By matching By matching By matching By matching By MS/MS 1 1 5862600 0 0 692580 0 0 5170000 5783 1079 5871 25770;25771 17027 17027 1 QDQISGLSQSEVK KGGDPLEKQDQISGLS GLSQSEVKTDVCTVHL K Q D V K T 0 0 0 1 0 3 1 1 0 1 1 1 0 0 0 3 0 0 0 1 0 13 0 1417.7049 Q99590-2;F8VXG7;Q99590;F8W028 Q99590-2 211 223 SCAF11 Protein SCAF11 yes no 2 2.1869E-35 124.47 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 60616000 2793000 11917000 9579200 7288500 13250000 15788000 5784 547 5872 25772;25773;25774;25775;25776;25777 17028;17029;17030;17031 17029 4 QDQSPSLRTGEEK LEKPMVEKQDQSPSLR SLRTGEEKKDVSISRL K Q D E K K 0 1 0 1 0 2 2 1 0 0 1 1 0 0 1 2 1 0 0 0 0 13 1 1473.7059 P54278;P54278-3;C9J167;I3L0B5;Q68D20 P54278 400 412 PMS2;PMS2CL Mismatch repair endonuclease PMS2;Protein PMS2CL yes no 3 0.00022056 94.402 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 4257200 0 753110 1020700 387620 652560 1443300 5785 966 5873 25778;25779;25780;25781;25782 17032;17033;17034 17034 3 QDQVCIAR KTRPRFVKQDQVCIAR QDQVCIARLRTAGTIC K Q D A R L 1 1 0 1 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 8 0 988.47601 H3BR35;P15170;P15170-2;F5GWG9;Q8IYD1 H3BR35 425 432 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 2 0.008061 103.83 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 9748200 689940 2845600 3932600 0 494160 1785900 5786 642 5874 25783;25784;25785;25786;25787 17035;17036 17036 2 QDRIFPPETSASVAATPPPSTASAPAAVNSSASADKPLSNMK LKKLKVKKQDRIFPPE DKPLSNMKILTLGKLS K Q D M K I 9 1 2 2 0 1 1 0 0 1 1 2 1 1 7 8 3 0 0 2 0 42 2 4166.059 P09874 P09874 353 394 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 4 1.6248E-80 83.802 By MS/MS By matching By MS/MS By matching By matching By MS/MS 2 1 1 174860000 46398000 0 22887000 0 0 105570000 5787 815 5875 25788;25789;25790;25791 17037;17038;17039;17040 17038 4 QDTSSSTTHLAQQLK AIQERLFKQDTSSSTT THLAQQLKQERQKELA K Q D L K Q 1 0 0 1 0 3 0 0 1 0 2 1 0 0 0 3 3 0 0 0 0 15 0 1643.8115 Q9NQW6;Q9NQW6-2 Q9NQW6 414 428 ANLN Actin-binding protein anillin yes no 2;3 2.8367E-05 89.136 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 1 2 2 46598000 4769600 6974100 5720900 742210 10589000 17803000 5788 1533 5876 25792;25793;25794;25795;25796;25797;25798;25799;25800;25801;25802;25803 17041;17042;17043;17044;17045;17046;17047 17041 7 QDTSSSTTHLAQQLKQER AIQERLFKQDTSSSTT AQQLKQERQKELACLR K Q D E R Q 1 1 0 1 0 4 1 0 1 0 2 1 0 0 0 3 3 0 0 0 0 18 1 2057.0138 Q9NQW6;Q9NQW6-2 Q9NQW6 414 431 ANLN Actin-binding protein anillin yes no 3;4 0.0012658 78.441 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 2 2 1 2 2 36856000 2191300 6984600 6821900 1958900 5561100 13338000 5789 1533 5877 25804;25805;25806;25807;25808;25809;25810;25811;25812;25813 17048;17049;17050;17051;17052;17053 17051 5 QDWVDGEPTEAEK QYDEALNKQDWVDGEP GEPTEAEKDFWELASL K Q D E K D 1 0 0 2 0 1 3 1 0 0 0 1 0 0 1 0 1 1 0 1 0 13 0 1502.6525 P78527;E7EUY0;P78527-2 P78527 2979 2991 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 4.5547E-91 146.59 By matching By matching By matching By matching By matching By MS/MS 1 1 1 6312800 0 1799500 490680 0 0 4022600 5790 1012 5878 25814;25815;25816 17054;17055 17055 2 QDYAFACEQMK VKCHWKEKQDYAFACE AFACEQMKSIRQDLTV K Q D M K S 2 0 0 1 1 2 1 0 0 0 0 1 1 1 0 0 0 0 1 0 0 11 0 1389.5693 Q96PV6;Q96PV6-2;F8W9Q9;E7EQP8 Q96PV6 557 567 LENG8 Leukocyte receptor cluster member 8 yes no 2 0.0020441 89.301 By matching By MS/MS By matching By matching By matching By matching 1 1 1 4388700 846950 755860 0 0 0 2785800 5791 362 5879 25817;25818;25819 17056 17056 1 QEAADAALRVLIGENEK AHSKKQGKQEAADAAL VLIGENEKAERMGFTE K Q E E K A 4 1 1 1 0 1 3 1 0 1 2 1 0 0 0 0 0 0 0 1 0 17 1 1825.9534 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 782 798 ADAR Double-stranded RNA-specific adenosine deaminase no no 3 6.0811E-08 93.181 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 41706000 8339500 0 0 0 33367000 0 5792 352;968 5880 25820;25821 17057;17058 17057 2 QEAATLAANNTQLQAR VLQLETLKQEAATLAA NNTQLQARVEMLETER K Q E A R V 5 1 2 0 0 3 1 0 0 0 2 0 0 0 0 0 2 0 0 0 0 16 0 1698.8649 Q14980-2;Q14980;F5H4J1;F5H6Y5 Q14980-2 420 435 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 0.014512 42.818 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1868200 0 653920 0 0 237140 977140 5793 1121 5881 25822;25823;25824 17059 17059 1 QEAGISEGQGTAGEEEEK LTVENSPKQEAGISEG TAGEEEEKKKQKRGGR K Q E E K K 2 0 0 0 0 2 6 4 0 1 0 1 0 0 0 1 1 0 0 0 0 18 0 1847.8021 F8VVL1;O43583 F8VVL1 76 93 DENR Density-regulated protein yes no 2 0.0031849 50.358 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 6136500 0 864510 660890 542290 1572600 2496200 5794 544 5882 25825;25826;25827;25828;25829 17060;17061 17061 2 QEAGISEGQGTAGEEEEKK LTVENSPKQEAGISEG AGEEEEKKKQKRGGRG K Q E K K K 2 0 0 0 0 2 6 4 0 1 0 2 0 0 0 1 1 0 0 0 0 19 1 1975.8971 F8VVL1;O43583 F8VVL1 76 94 DENR Density-regulated protein yes no 3 0.0094523 38.057 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2070500 0 467980 0 375330 417880 809340 5795 544 5883 25830;25831;25832;25833 17062 17062 1 QEATFCSQRDGDASLNK RINSSSVKQEATFCSQ DGDASLNKALSSSADD K Q E N K A 2 1 1 2 1 2 1 1 0 0 1 1 0 1 0 2 1 0 0 0 0 17 1 1925.8538 Q9NQW6;Q9NQW6-2;H7C167;H7C0Y6 Q9NQW6 255 271 ANLN Actin-binding protein anillin yes no 3 0.0020731 55.66 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 31054000 0 0 4285800 2145400 4448800 20174000 5796 1533 5884 25834;25835;25836;25837 17063;17064;17065;17066 17063 4 QEATRQDHAQQLATAAEER QLKEVAEKQEATRQDH LATAAEEREASLRERD K Q E E R E 5 2 0 1 0 4 3 0 1 0 1 0 0 0 0 0 2 0 0 0 0 19 1 2152.0257 Q14980-2;Q14980;F5H4J1;F5H6Y5 Q14980-2 574 592 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3;4 0.0022469 52.498 By MS/MS By MS/MS By matching By matching By matching By MS/MS 2 2 2 1 2 2 28067000 3231300 6745100 2430300 1178400 5278700 9203000 5797 1121 5885 25838;25839;25840;25841;25842;25843;25844;25845;25846;25847;25848 17067;17068;17069;17070;17071;17072 17070 5 QECIKEVVEK TSEDSLVKQECIKEVV CIKEVVEKREACHCEE K Q E E K R 0 0 0 0 1 1 3 0 0 1 0 2 0 0 0 0 0 0 0 2 0 10 1 1260.6384 Q9Y2M0-2;Q9Y2M0;H3BQ24 Q9Y2M0-2 286 295 FAN1 Fanconi-associated nuclease 1 yes no 2;3 0.0028869 96.113 By matching By matching By MS/MS By matching By matching By MS/MS 2 2 2 2 2 2 16067000 2009700 1790500 2133000 1946500 5160500 3026900 5798 1634 5886 25849;25850;25851;25852;25853;25854;25855;25856;25857;25858;25859;25860 17073;17074 17074 2 QEELVQQVR VTDEDIRKQEELVQQV EELVQQVRKRLEEALM K Q E V R K 0 1 0 0 0 3 2 0 0 0 1 0 0 0 0 0 0 0 0 2 0 9 0 1127.5935 O95983;O95983-2 O95983 228 236 MBD3 Methyl-CpG-binding domain protein 3 yes no 2 0.0058982 96.668 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 7397700 0 3137500 1113900 0 154780 2991500 5799 776 5887 25861;25862;25863;25864 17075;17076 17075 2 QEELVQQVRK VTDEDIRKQEELVQQV ELVQQVRKRLEEALMA K Q E R K R 0 1 0 0 0 3 2 0 0 0 1 1 0 0 0 0 0 0 0 2 0 10 1 1255.6884 O95983;O95983-2 O95983 228 237 MBD3 Methyl-CpG-binding domain protein 3 yes no 2;3 1.3456E-09 117.31 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 1 2 28980000 0 8685700 4612900 344100 0 15337000 5800 776 5888 25865;25866;25867;25868;25869;25870;25871 17077;17078;17079;17080;17081 17079 5 QEENGVFIK HASSNVNKQEENGVFI EENGVFIKTTDDTTTD K Q E I K T 0 0 1 0 0 1 2 1 0 1 0 1 0 1 0 0 0 0 0 1 0 9 0 1062.5346 Q7Z2T5 Q7Z2T5 586 594 TRMT1L TRMT1-like protein yes yes 2 0.025701 66.692 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 9659200 0 0 1511000 502240 1717400 5928600 5801 1248 5889 25872;25873;25874;25875 17082 17082 1 QEENGVFIKTTDDTTTDNYIAQGK HASSNVNKQEENGVFI DNYIAQGKRKSNEMIT K Q E G K R 1 0 2 3 0 2 2 2 0 2 0 2 0 1 0 0 5 0 1 1 0 24 1 2687.2562 Q7Z2T5 Q7Z2T5 586 609 TRMT1L TRMT1-like protein yes yes 3 1.0686E-08 69.259 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 4775600 0 2310000 0 0 0 2465600 5802 1248 5890 25876;25877 17083;17084 17084 2 QEEPPPGPQRPDQSAAAAGPGDPK MEEEQRQRQEEPPPGP AAGPGDPKRKGGPGST R Q E P K R 4 1 0 2 0 3 2 3 0 0 0 1 0 0 7 1 0 0 0 0 0 24 1 2396.1357 Q9BQ61 Q9BQ61 81 104 C19orf43 Uncharacterized protein C19orf43 yes yes 3 0.00070307 52.91 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 11765000 0 4085800 3086300 1021900 3266000 304730 5803 1437 5891 25878;25879;25880;25881;25882 17085;17086;17087 17085 3 QEESVDPDYWEK EVEREIIKQEESVDPD VDPDYWEKLLRHHYEQ K Q E E K L 0 0 0 2 0 1 3 0 0 0 0 1 0 0 1 1 0 1 1 1 0 12 0 1523.6416 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1279 1290 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 0.0018289 83.204 By matching By matching By matching By matching By matching By MS/MS 1 1 8121100 0 3112200 0 0 0 5008900 5804 486 5892 25883;25884 17088 17088 1 QEEVGGVKEEAGGLLQCPEVAK ASLPGDFKQEEVGGVK LQCPEVAKADRWLEDS K Q E A K A 2 0 0 0 1 2 5 4 0 0 2 2 0 0 1 0 0 0 0 3 0 22 1 2326.1475 Q7Z5J4-3;E7EVZ3;Q7Z5J4;A8MTC3;Q7Z5J4-2;C9JWB0;A8MXE8;Q7Z5J4-4;E7ETW1 Q7Z5J4-3 812 833 RAI1 Retinoic acid-induced protein 1 yes no 3 9.6008E-07 79.341 By matching By MS/MS By matching By MS/MS By matching By matching 1 2 16144000 0 14582000 0 1562000 0 0 5805 39 5893 25885;25886;25887 17089;17090 17090 2 QELDDILK SKTGSMSKQELDDILK QELDDILKFGTEELFK K Q E L K F 0 0 0 2 0 1 1 0 0 1 2 1 0 0 0 0 0 0 0 0 0 8 0 972.51278 F5H2G1;F5GWX5;Q14839;Q14839-2;Q12873;E9PG89;Q12873-2 F5H2G1 1187 1194 CHD4;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 no no 2 1.0347E-15 127.02 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 223670000 0 33195000 53110000 0 0 137370000 5806 486;430 5894 25888;25889;25890;25891 17091;17092;17093;17094 17091 4 QELEADVSHKETK LSSECHSKQELEADVS DVSHKETKRKLVEAEN K Q E T K R 1 0 0 1 0 1 3 0 1 0 1 2 0 0 0 1 1 0 0 1 0 13 1 1512.742 Q96QE3;Q96QE3-2 Q96QE3 985 997 ATAD5 ATPase family AAA domain-containing protein 5 yes no 3 5.3753E-09 101.56 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 8654800 0 1780800 3399100 694130 0 2780800 5807 1415 5895 25892;25893;25894;25895 17095;17096;17097 17096 3 QELITYPQPQK PREVTEAKQELITYPQ ITYPQPQKTSIPAPLE K Q E Q K T 0 0 0 0 0 3 1 0 0 1 1 1 0 0 2 0 1 0 1 0 0 11 0 1343.7085 Q86SS3;E9PGM9;P78332;C9JSL1;F8WF63;F8WCA5 Q86SS3 48 58 RBM6 RNA-binding protein 6 yes no 2 0.02409 81.92 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 5654100 260370 1219400 0 0 1650100 2524200 5808 431 5896 25896;25897;25898;25899 17098;17099 17099 0 QEMEQQEQLK Q E L K 0 0 0 0 0 4 3 0 0 0 1 1 1 0 0 0 0 0 0 0 0 10 0 1289.5922 REV__Q9Y6N9-5 yes no 2 0.01424 68.626 By matching By matching By MS/MS By matching By matching By matching 1 1 660280 0 0 474020 0 0 186270 + 5809 1681 5897 25900;25901 17100 17100 1 QENLSWQHELHQLR QIMQEELRQENLSWQH QHELHQLRMEKSSWEI R Q E L R M 0 1 1 0 0 3 2 0 2 0 3 0 0 0 0 1 0 1 0 0 0 14 0 1816.8969 Q14789;E7EP74 Q14789 2940 2953 GOLGB1 Golgin subfamily B member 1 yes no 2 0.036774 48.277 By matching By matching By matching By MS/MS By matching By matching 1 1 394380000 0 0 0 393610000 0 768060 5810 355 5898 25902;25903 17101 17101 0 QEPENDQGVVSQAGK VEGVLPSKQEPENDQG GVVSQAGKDDRESKLE K Q E G K D 1 0 1 1 0 3 2 2 0 0 0 1 0 0 1 1 0 0 0 2 0 15 0 1584.738 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 217 231 DIDO1 Death-inducer obliterator 1 yes no 2 0.0060092 51.727 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1668000 0 0 292370 139960 441390 794280 5811 1447 5899 25904;25905;25906;25907 17102 17102 1 QEPERNECFLSHK DMADCCEKQEPERNEC NECFLSHKDDSPDLPK K Q E H K D 0 1 1 0 1 1 3 0 1 0 1 1 0 1 1 1 0 0 0 0 0 13 1 1672.7628 CON__P02769 CON__P02769 118 130 yes yes 3 1.3377E-20 110.15 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 99555000 6886100 21504000 21419000 0 0 49745000 + 5812 294 5900 25908;25909;25910;25911;25912 17103;17104;17105;17106;17107 17105 5 QEPERNECFLSHKDDSPDLPK DMADCCEKQEPERNEC DDSPDLPKLKPDPNTL K Q E P K L 0 1 1 3 1 1 3 0 1 0 2 2 0 1 3 2 0 0 0 0 0 21 2 2540.1602 CON__P02769 CON__P02769 118 138 yes yes 4 0.030129 33.248 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 38083000 0 11405000 5352600 2761000 6072600 12492000 + 5813 294 5901 25913;25914;25915;25916;25917 17108 17108 1 QEPFEPKEEISGSGTQPGGAK PPKIFYIKQEPFEPKE GTQPGGAKEETKVFSG K Q E A K E 1 0 0 0 0 2 4 4 0 1 0 2 0 1 3 2 1 0 0 0 0 21 1 2172.0335 Q96C00 Q96C00 287 307 ZBTB9 Zinc finger and BTB domain-containing protein 9 yes yes 3 0.00017962 58.339 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 8826700 0 1653000 815120 779450 2358600 3220500 5814 1373 5902 25918;25919;25920;25921;25922 17109;17110;17111;17112 17110 4 QEPFEPKEEISGSGTQPGGAKEETK PPKIFYIKQEPFEPKE GGAKEETKVFSGGDTE K Q E T K V 1 0 0 0 0 2 6 4 0 1 0 3 0 1 3 2 2 0 0 0 0 25 2 2659.2613 Q96C00 Q96C00 287 311 ZBTB9 Zinc finger and BTB domain-containing protein 9 yes yes 4 0.0023345 49.497 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 11661000 2497800 1923400 1534600 1040300 2274000 2390600 5815 1373 5903 25923;25924;25925;25926;25927;25928 17113;17114 17114 2 QEPLLIGSTK TRALCATRQEPLLIGS PLLIGSTKSNMGHPEP R Q E T K S 0 0 0 0 0 1 1 1 0 1 2 1 0 0 1 1 1 0 0 0 0 10 0 1084.6128 P49327 P49327 317 326 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.022902 61.213 By matching By matching By matching By matching By matching By MS/MS 1 1 2080500 0 623300 0 0 0 1457200 5816 934 5904 25929;25930 17115 17115 1 QEQINTEPLEDTVLSPTK EPEDKTVKQEQINTEP DTVLSPTKKRKRQKGT K Q E T K K 0 0 1 1 0 2 3 0 0 1 2 1 0 0 2 1 3 0 0 1 0 18 0 2041.0215 O15446;O15446-2 O15446 271 288 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes no 2 0.025093 37.157 By matching By matching By matching By matching By MS/MS By matching 1 8766100 0 0 0 0 8766100 0 5817 706 5905 25931 17116 17116 1 QEQINTEPLEDTVLSPTKK EPEDKTVKQEQINTEP TVLSPTKKRKRQKGTE K Q E K K R 0 0 1 1 0 2 3 0 0 1 2 2 0 0 2 1 3 0 0 1 0 19 1 2169.1165 O15446;O15446-2 O15446 271 289 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes no 3 2.4488E-102 127.88 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 5818 706 5906 25932 17117 17117 1 QEQNQEQPIR ________________ QNQEQPIRCEKDERFF - Q E I R C 0 1 1 0 0 4 2 0 0 1 0 0 0 0 1 0 0 0 0 0 0 10 0 1268.6109 CON__P02668 CON__P02668 1 10 yes yes 2 0.034449 90.05 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 + 5819 291 5907 25933 17118 17118 1 QERNFDDATMK IGVKYSEKQERNFDDA NFDDATMKAGQCVIGL K Q E M K A 1 1 1 2 0 1 1 0 0 0 0 1 1 1 0 0 1 0 0 0 0 11 1 1353.5983 E7ENR3;B4DDF4;Q99439;B4DUT8;H3BTZ5;H3BVI6 E7ENR3 129 139 CNN2 Calponin-2 yes no 2;3 0.00072635 98.407 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 25769000 223140 4228000 4794700 1423800 5011700 10088000 5820 80 5908 25934;25935;25936;25937;25938;25939;25940;25941;25942;25943;25944 17119;17120;17121;17122;17123;17124 17122 6 QESGSEIHVEVK EQPQPSGKQESGSEIH SEIHVEVKAQSLVISP K Q E V K A 0 0 0 0 0 1 3 1 1 1 0 1 0 0 0 2 0 0 0 2 0 12 0 1340.6572 P46013;F5H4V4;P46013-2;E7EN66 P46013 561 572 MKI67 Antigen KI-67 no no 2 0.001885 76.868 By matching By MS/MS By matching By matching By MS/MS By MS/MS 2 1 1 5747800 0 1595400 0 0 1390100 2762400 5821 919;920 5909 25945;25946;25947;25948 17125;17126;17127;17128 17125 4 QETIMRHHTLRQAPQPQSSLQR PAVSSVSKQETIMRHH QPQSSLQRGIPTSARS K Q E Q R G 1 3 0 0 0 5 1 0 2 1 2 0 1 0 2 2 2 0 0 0 0 22 2 2641.3619 Q8WXI9 Q8WXI9 499 520 GATAD2B Transcriptional repressor p66-beta yes yes 4 0.022131 34.148 By matching By matching By matching By matching By matching By MS/MS 1 2346300 0 0 0 0 0 2346300 5822 1344 5910 25949 17129 17129 1 QETVADFTPK NTGEETSKQETVADFT TVADFTPKKEEEESQP K Q E P K K 1 0 0 1 0 1 1 0 0 0 0 1 0 1 1 0 2 0 0 1 0 10 0 1134.5557 E9PHJ7;O75400-2;O75400-3;F8W9L2;O75400;F5H578 E9PHJ7 235 244 PRPF40A Pre-mRNA-processing factor 40 homolog A yes no 2 0.01406 68.786 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 14175000 379700 2780100 1253300 1384000 2180800 6197500 5823 438 5911 25950;25951;25952;25953;25954;25955 17130 17130 1 QEVIITK RCHRLGQKQEVIITKF KQEVIITKFIVKDSVE K Q E T K F 0 0 0 0 0 1 1 0 0 2 0 1 0 0 0 0 1 0 0 1 0 7 0 829.49092 Q14527;Q14527-2 Q14527 953 959 HLTF Helicase-like transcription factor yes no 2 7.3957E-06 101.6 By matching By matching By matching By matching By matching By MS/MS 1 1 1860100 0 1018800 0 0 0 841330 5824 1107 5912 25956;25957 17131 17131 0 QEVLIRTDPESR MYTGPESRQEVLIRTD IRTDPESRQEIMCTGH R Q E S R Q 0 2 0 1 0 1 2 0 0 1 1 0 0 0 1 1 1 0 0 1 0 12 1 1441.7525 F2Z2E1;Q96EK7;F5GZX9;F5GY05;Q96EK7-2 F2Z2E1 483 494 FAM120B Constitutive coactivator of peroxisome proliferator-activated receptor gamma yes no 3 0.029521 47.991 By matching By MS/MS By matching By matching By matching By matching 1 1 2312600 0 1580700 731900 0 0 0 5825 474 5913 25958;25959 17132 17132 1 QEVPMCTGPEAR MCSDPEPRQEVPMCTG MCTGPEARQEVPMYTD R Q E A R Q 1 1 0 0 1 1 2 1 0 0 0 0 1 0 2 0 1 0 0 1 0 12 0 1373.6068 F2Z2E1;Q96EK7;F5GZX9;F5GY05;Q96EK7-2 F2Z2E1 411 422 FAM120B Constitutive coactivator of peroxisome proliferator-activated receptor gamma yes no 2 0.0038334 67.519 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3278100 0 1321100 0 0 583700 1373200 5826 474 5914 25960;25961;25962 17133 17133 1 QEVPMYTGSEPR MYTDSEPRQEVPMYTG MYTGSEPRQEVPMYTG R Q E P R Q 0 1 0 0 0 1 2 1 0 0 0 0 1 0 2 1 1 0 1 1 0 12 0 1392.6344 F2Z2E1;Q96EK7;F5GZX9;F5GY05;Q96EK7-2 F2Z2E1 447 458 FAM120B Constitutive coactivator of peroxisome proliferator-activated receptor gamma yes no 2 0.0088026 60.157 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 10405000 0 1590500 1101300 0 1109300 6604100 5827 474 5915 25963;25964;25965;25966 17134 17134 1 QEVPTCTGPESR MCSDPEPRQEVPTCTG TCTGPESRREVPMCSD R Q E S R R 0 1 0 0 1 1 2 1 0 0 0 0 0 0 2 1 2 0 0 1 0 12 0 1359.6089 F2Z2E1;Q96EK7;F5GZX9;F5GY05;Q96EK7-2 F2Z2E1 387 398 FAM120B Constitutive coactivator of peroxisome proliferator-activated receptor gamma yes no 2 0.0056833 63.662 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2578700 0 653520 419570 0 0 1505600 5828 474 5916 25967;25968;25969 17135;17136;17137 17135 3 QEVSRIPASQTSVPFDHLGK SSSDLTGRQEVSRIPA VPFDHLGK________ R Q E G K - 1 1 0 1 0 2 1 1 1 1 1 1 0 1 2 3 1 0 0 2 0 20 1 2195.1335 P49674;H0Y5S9;H0Y682 P49674 397 416 CSNK1E Casein kinase I isoform epsilon yes no 4 0.0060511 44.788 By matching By matching By matching By matching By matching By MS/MS 1 4908600 0 0 0 0 0 4908600 5829 939 5917 25970 17138 17138 1 QEVVRSVLEPQAVPDPEEGSSAPR IREVEQSRQEVVRSVL EEGSSAPRSWKGMNSQ R Q E P R S 2 2 0 1 0 2 4 1 0 0 1 0 0 0 4 3 0 0 0 4 0 24 1 2575.2878 Q86UT8 Q86UT8 163 186 CCDC84 Coiled-coil domain-containing protein 84 yes yes 3 9.3859E-09 73.574 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 15723000 4318900 11404000 0 0 0 0 5830 1263 5918 25971;25972 17139;17140 17139 2 QEYDESGPSIVHRK FQQMWISKQEYDESGP GPSIVHRKCF______ K Q E R K C 0 1 0 1 0 1 2 1 1 1 0 1 0 0 1 2 0 0 1 1 0 14 1 1643.7903 F5H0N0;B4E335;P63261;P60709;B4DW52;F5GYT4;Q6S8J3;P0CG38;A5A3E0;P0CG39;Q9BYX7 F5H0N0 318 331 ACTG1;ACTB;POTEE;POTEI;POTEF;POTEJ;POTEKP Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member I;POTE ankyrin domain family member F;POTE ankyrin domain family member J;Putative beta-actin-like protein 3 yes no 3;4 0.00020332 88.092 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 2 2 2 2 22180000 1005400 2222200 5258000 2190700 2018900 9485000 5831 164 5919 25973;25974;25975;25976;25977;25978;25979;25980;25981;25982 17141;17142;17143;17144;17145;17146;17147 17145 7 QEYEQLIAK TKTLNDMRQEYEQLIA EYEQLIAKNRKDIENQ R Q E A K N 1 0 0 0 0 2 2 0 0 1 1 1 0 0 0 0 0 0 1 0 0 9 0 1120.5764 P35527;CON__P35527 P35527 328 336 KRT9 Keratin, type I cytoskeletal 9 yes no 2 1.3225E-19 128.86 By matching By MS/MS By matching By matching By matching By matching 1 1 4759700 0 2167500 2592200 0 0 0 + 5832 899 5920 25983;25984 17148;17149 17149 2 QEYVDYSESAK DSTPATWKQEYVDYSE VDYSESAKKEVVAEVV K Q E A K K 1 0 0 1 0 1 2 0 0 0 0 1 0 0 0 2 0 0 2 1 0 11 0 1317.5725 O60832 O60832 414 424 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 2 7.9349E-30 128.08 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 30424000 5520500 2972800 2392500 2948800 9281700 7307800 5833 733 5921 25985;25986;25987;25988;25989;25990 17150;17151;17152;17153;17154;17155 17155 6 QEYVDYSESAKK DSTPATWKQEYVDYSE DYSESAKKEVVAEVVK K Q E K K E 1 0 0 1 0 1 2 0 0 0 0 2 0 0 0 2 0 0 2 1 0 12 1 1445.6674 O60832 O60832 414 425 DKC1 H/ACA ribonucleoprotein complex subunit 4 yes yes 3 0.030041 40.377 By matching By matching By matching By matching By MS/MS By matching 1 1004500 0 0 0 0 1004500 0 5834 733 5922 25991 17156 17156 1 QFDAGTVNYEQPTK PPEPKRKKQFDAGTVN VNYEQPTKDGIDHSNI K Q F T K D 1 0 1 1 0 2 1 1 0 0 0 1 0 1 1 0 2 0 1 1 0 14 0 1596.742 Q59HE6;H0YGC0;P52756 Q59HE6 415 428 RBM5 RNA-binding protein 5 yes no 2 0.0048001 57.034 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 3927500 0 888580 664320 0 915940 1458600 5835 620 5923 25992;25993;25994;25995 17157;17158;17159;17160;17161 17158 5 QFENPIIK IRQWRCAKQFENPIIK QFENPIIKSCPECRVI K Q F I K S 0 0 1 0 0 1 1 0 0 2 0 1 0 1 1 0 0 0 0 0 0 8 0 987.53893 B4DPR4;C9J494;Q9H000 B4DPR4 236 243 MKRN2 Probable E3 ubiquitin-protein ligase makorin-2 yes no 2 0.014854 87.181 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 8374900 966540 978450 0 1116700 0 5313200 5836 114 5924 25996;25997;25998;25999 17162 17162 1 QFESLPATHIR HRELFLSRQFESLPAT SLPATHIRGKCSVTLL R Q F I R G 1 1 0 0 0 1 1 0 1 1 1 0 0 1 1 1 1 0 0 0 0 11 0 1297.6779 O94776 O94776 93 103 MTA2 Metastasis-associated protein MTA2 yes yes 2 0.00053364 95.477 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 13035000 0 3334500 0 0 0 9700300 5837 754 5925 26000;26001 17163;17164 17163 1 QFESLPATHIRGK HRELFLSRQFESLPAT PATHIRGKCSVTLLNE R Q F G K C 1 1 0 0 0 1 1 1 1 1 1 1 0 1 1 1 1 0 0 0 0 13 1 1482.7943 O94776 O94776 93 105 MTA2 Metastasis-associated protein MTA2 yes yes 3 0.0086828 57.106 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 48901000 0 9567000 7921800 0 1165700 30246000 5838 754 5926 26002;26003;26004;26005 17165;17166 17165 2 QFNCPVCDYAASK VELHVNPRQFNCPVCD VCDYAASKKCNLQYHF R Q F S K K 2 0 1 1 2 1 0 0 0 0 0 1 0 1 1 1 0 0 1 1 0 13 0 1558.6544 Q13127;A0PJ83;Q13127-4;F8WAN5 Q13127 388 400 REST RE1-silencing transcription factor yes no 2 0.006464 59.248 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2110100 0 684510 508290 0 0 917320 5839 1072 5927 26006;26007;26008 17167 17167 1 QFQLYEEPDTK DGTGRKRKQFQLYEEP LYEEPDTKLARVDSEG K Q F T K L 0 0 0 1 0 2 2 0 0 0 1 1 0 1 1 0 1 0 1 0 0 11 0 1396.6511 O43823;B7Z8L8 O43823 307 317 AKAP8 A-kinase anchor protein 8 yes no 2 5.9088E-10 112.94 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 6616000 3649100 0 0 878350 0 2088500 5840 721 5928 26009;26010;26011;26012 17168;17169;17170 17169 3 QFSSADEAALKEPIIK DQRAREGKQFSSADEA ALKEPIIKKFE_____ K Q F I K K 3 0 0 1 0 1 2 0 0 2 1 2 0 1 1 2 0 0 0 0 0 16 1 1745.92 D6RD67;Q9HCC0-2;Q9HCC0 D6RD67 268 283 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes no 3 0.012435 44.132 By matching By matching By matching By MS/MS By matching By matching 1 1259900 0 0 0 1259900 0 0 5841 326 5929 26013 17171 17171 1 QFSSSYLSR ________________ FSSSYLSRSGGGGGGG R Q F S R S 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 4 0 0 1 0 0 9 0 1073.5142 P35527;CON__P35527 P35527 5 13 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.014686 77.533 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 55256000 0 4889400 7815600 7810400 20579000 14162000 + 5842 899 5930 26014;26015;26016;26017;26018 17172;17173 17173 2 QFTSSSSIKGSSGLGGGSSR ________________ GLGGGSSRTSCRLSGG R Q F S R T 0 1 0 0 0 1 0 5 0 1 1 1 0 1 0 8 1 0 0 0 0 20 1 1885.913 Q04695;CON__Q04695;H9KV34;A8MW45;CON__Q9QWL7;F5H7G6;C9JH30 Q04695 7 26 KRT17 Keratin, type I cytoskeletal 17 yes no 3 0.021179 36.744 By matching By matching By matching By MS/MS By matching By matching 1 1 1244000 0 429750 0 814200 0 0 + 5843 304 5931 26019;26020 17174 17174 1 QFTYYPLVEDKEEVQRK GGDVSDSKQFTYYPLV DKEEVQRKRRKALPTF K Q F R K R 0 1 0 1 0 2 3 0 0 0 1 2 0 1 1 0 1 0 2 2 0 17 2 2171.0899 Q00653-3;Q00653-4;Q00653 Q00653-3 322 338 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes no 4 0.0016514 75.376 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 22623000 0 0 8103600 11513000 3006600 0 5844 1021 5932 26021;26022;26023 17175;17176 17175 2 QFVCQTCGK YTVHTKEKQFVCQTCG FVCQTCGKQFLRERQL K Q F G K Q 0 0 0 0 2 2 0 1 0 0 0 1 0 1 0 0 1 0 0 1 0 9 0 1126.4899 Q9Y2K1;Q9Y2K1-2 Q9Y2K1 605 613 ZBTB1 Zinc finger and BTB domain-containing protein 1 yes no 2 0.015286 76.17 By matching By matching By MS/MS By matching By matching By matching 1 629140 0 0 629140 0 0 0 5845 1633 5933 26024 17177 17177 1 QFVDGPPGPVK EKRRSTSRQFVDGPPG DGPPGPVKKTRSIGSA R Q F V K K 0 0 0 1 0 1 0 2 0 0 0 1 0 1 3 0 0 0 0 2 0 11 0 1139.5975 Q9H0H5;F8VRD2;F8W1E5;F8W1T4;F8VV37 Q9H0H5 189 199 RACGAP1 Rac GTPase-activating protein 1 yes no 2 0.0047155 75.566 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 16408000 1398300 2538200 2017800 1451200 2838800 6163800 5846 1479 5934 26025;26026;26027;26028;26029;26030 17178 17178 1 QFVDGPPGPVKK EKRRSTSRQFVDGPPG GPPGPVKKTRSIGSAV R Q F K K T 0 0 0 1 0 1 0 2 0 0 0 2 0 1 3 0 0 0 0 2 0 12 1 1267.6925 Q9H0H5;F8VRD2;F8W1E5;F8W1T4;F8VV37 Q9H0H5 189 200 RACGAP1 Rac GTPase-activating protein 1 yes no 3 9.4336E-06 100.69 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 3885200 434870 907510 609790 0 0 1933000 5847 1479 5935 26031;26032;26033;26034 17179;17180 17179 2 QGANINEIRQMSGAQIK LIGCIIGRQGANINEI QMSGAQIKIANPVEGS R Q G I K I 2 1 2 0 0 3 1 2 0 3 0 1 1 0 0 1 0 0 0 0 0 17 1 1856.9527 Q15365 Q15365 298 314 PCBP1 Poly(rC)-binding protein 1 yes yes 3 3.5987E-74 130.47 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 88349000 42453000 1552000 33679000 0 7320200 3345300 5848 1135 5936;5937 26035;26036;26037;26038;26039 17181;17182;17183;17184;17185 17184 142 4 QGDVYRQGTTPPIWHLTDKK AVLIDMERQGDVYRQG IWHLTDKKRERMQIKR R Q G K K R 0 1 0 2 0 2 0 2 1 1 1 2 0 0 2 0 3 1 1 1 0 20 2 2339.2022 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 340 359 ADAR Double-stranded RNA-specific adenosine deaminase no no 4 0.019792 36.207 By matching By matching By matching By matching By matching By MS/MS 1 1 27096000 0 922870 0 0 0 26173000 5849 352;968 5938 26040;26041 17186 17186 1 QGECLNFGIK RKPAVNIKQGECLNFG ECLNFGIKTLEEIKSK K Q G I K T 0 0 1 0 1 1 1 2 0 1 1 1 0 1 0 0 0 0 0 0 0 10 0 1164.5597 B4DLG2;O75152;E9PQ61;E9PBY7 B4DLG2 152 161 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 0.0086818 80.102 By matching By matching By matching By matching By matching By MS/MS 1 1 1 12251000 0 2059200 0 855860 0 9336400 5850 97 5939 26042;26043;26044 17187 17187 1 QGGAALEGSALANGR SKFKKLMKQGGAALEG GSALANGRALSAGSPP K Q G G R A 4 1 1 0 0 1 1 4 0 0 2 0 0 0 0 1 0 0 0 0 0 15 0 1370.6902 P56177;F8VZ54 P56177 189 203 DLX1 Homeobox protein DLX-1 yes no 2 0.00045531 71.531 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 12886000 1382000 2061000 2387400 0 2602500 4453500 5851 972 5940 26045;26046;26047;26048;26049 17188;17189 17188 2 QGGGGGGGSVPGIER KRGEIIAKQGGGGGGG GSVPGIERMGPGIDRL K Q G E R M 0 1 0 0 0 1 1 8 0 1 0 0 0 0 1 1 0 0 0 1 0 15 0 1283.6218 P52272-2;P52272;Q59ES8 P52272-2 350 364 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 2 0.00077552 71.545 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 14665000 2247100 1948400 2296100 1247700 3257300 3668700 5852 956 5941 26050;26051;26052;26053;26054;26055 17190;17191;17192;17193;17194 17190 5 QGGLGPMNIPLVSDPK AWVNTPKKQGGLGPMN IPLVSDPKRTIAQDYG K Q G P K R 0 0 1 1 0 1 0 3 0 1 2 1 1 0 3 1 0 0 0 1 0 16 0 1621.8498 Q06830 Q06830 94 109 PRDX1 Peroxiredoxin-1 yes yes 2 0.0031887 66.289 By matching By matching By matching By MS/MS By matching By matching 1 1691300 0 0 0 1691300 0 0 5853 1044 5942 26056 17195 17195 1 QGIETPEDQNDLRK EQIRNILKQGIETPED EDQNDLRKMQLRELAR K Q G R K M 0 1 1 2 0 2 2 1 0 1 1 1 0 0 1 0 1 0 0 0 0 14 1 1641.7958 Q15637-6;Q15637-4;Q15637-3;Q15637-2;Q15637 Q15637-6 228 241 SF1 Splicing factor 1 no no 2;3 8.9071E-172 164.13 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 1 1 2 1 386930000 83665000 55623000 41717000 56810000 70780000 78330000 5854 1141 5943 26057;26058;26059;26060;26061;26062;26063;26064;26065;26066 17196;17197;17198;17199;17200;17201;17202;17203 17198 8 QGLGPSGTSGARKPASSK LVTMHDLKQGLGPSGT ARKPASSKYKLKVSLQ K Q G S K Y 2 1 0 0 0 1 0 4 0 0 1 2 0 0 2 4 1 0 0 0 0 18 2 1684.8856 Q5T7U1;Q9Y5Q8-2;H7BY84;Q9Y5Q8;Q9Y5Q8-3;H0Y5D2;H0Y3Y0;C9J393;H9KV68 Q5T7U1 299 316 GTF3C5 General transcription factor 3C polypeptide 5 yes no 3 0.021395 44.998 By matching By matching By matching By matching By matching By MS/MS 1 1 1573400 0 0 604730 0 0 968710 5855 657 5944 26067;26068 17204 17204 1 QGNKNDLEMGIK TRNLPHSKQGNKNDLE NDLEMGIKAARPEIAD K Q G I K A 0 0 2 1 0 1 1 2 0 1 1 2 1 0 0 0 0 0 0 0 0 12 1 1345.666 Q96GM8;B4DEM6 Q96GM8 397 408 TOE1 Target of EGR1 protein 1 yes no 3 0.032347 46.985 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 7878300 1189800 0 3553700 980140 631960 1522700 5856 1389 5945 26069;26070;26071;26072;26073 17205 17205 1 QGNLSSQVPLK EFISFISKQGNLSSQV LSSQVPLKRLLNTWTN K Q G L K R 0 0 1 0 0 2 0 1 0 0 2 1 0 0 1 2 0 0 0 1 0 11 0 1169.6404 P78527;E7EUY0;P78527-2 P78527 3148 3158 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.0035513 81.92 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 36691000 2391000 2951000 1278500 1433500 7818300 20818000 5857 1012 5946 26074;26075;26076;26077;26078;26079 17206;17207;17208;17209 17206 4 QGNLSSQVPLKR EFISFISKQGNLSSQV SSQVPLKRLLNTWTNR K Q G K R L 0 1 1 0 0 2 0 1 0 0 2 1 0 0 1 2 0 0 0 1 0 12 1 1325.7415 P78527;E7EUY0;P78527-2 P78527 3148 3159 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.019921 66.326 By matching By matching By matching By matching By matching By MS/MS 1 1 1198500 0 359510 0 0 0 839020 5858 1012 5947 26080;26081 17210 17210 1 QGQPVMVSGVHHK NVFRECWKQGQPVMVS MVSGVHHKLNSELWKP K Q G H K L 0 0 0 0 0 2 0 2 2 0 0 1 1 0 1 1 0 0 0 3 0 13 0 1402.714 Q9Y4C1;F5H4E6;F5H070 Q9Y4C1 972 984 KDM3A Lysine-specific demethylase 3A yes no 3 0.00018026 94.402 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2232300 0 355300 388860 0 349430 1138700 5859 516 5948 26082;26083;26084;26085 17211;17212 17212 2 QGQSNSGVVQVQQK QTFATWVKQGQSNSGV GVVQVQQKVLGIIPSS K Q G Q K V 0 0 1 0 0 5 0 2 0 0 0 1 0 0 0 2 0 0 0 3 0 14 0 1485.7536 Q12830-4;Q12830-2;Q12830 Q12830-4 2120 2133 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 0.0099323 51.092 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 5554900 584290 577840 1001200 328850 556480 2506300 5860 1061 5949 26086;26087;26088;26089;26090;26091 17213;17214;17215 17214 3 QGSFRGFPALSQK APIEQLARQGSFRGFP GFPALSQKMSPFKRQL R Q G Q K M 1 1 0 0 0 2 0 2 0 0 1 1 0 2 1 2 0 0 0 0 0 13 1 1421.7415 Q9Y6R0;P49757-4;P49757-2;P49757-3;P49757;G3V3Z8 P49757-4 263 275 NUMBL;NUMB Numb-like protein;Protein numb homolog no no 3 0.012258 53.448 By matching By matching By matching By matching By matching By MS/MS 1 1 2575200 0 942400 0 0 0 1632800 5861 943;1661 5950 26092;26093 17216 17216 1 QGSPIHVLK TIRIWDLKQGSPIHVL GSPIHVLKGTEGHQGP K Q G L K G 0 0 0 0 0 1 0 1 1 1 1 1 0 0 1 1 0 0 0 1 0 9 0 977.56581 C9JG97;Q13685;C9JEH3 C9JG97 227 235 AAMP Angio-associated migratory cell protein yes no 2 0.031556 63.816 By matching By matching By MS/MS By matching By matching By matching 1 1 1 77099000 0 15183000 45856000 0 16061000 0 5862 241 5951 26094;26095;26096 17217 17217 1 QGTTPPIWHLTDKK ERQGDVYRQGTTPPIW IWHLTDKKRERMQIKR R Q G K K R 0 0 0 1 0 1 0 1 1 1 1 2 0 0 2 0 3 1 0 0 0 14 1 1620.8624 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 346 359 ADAR Double-stranded RNA-specific adenosine deaminase no no 3;4 0.013477 43.305 By matching By MS/MS By MS/MS By matching By matching By matching 1 2 5607000 0 3104800 2502200 0 0 0 5863 352;968 5952 26097;26098;26099 17218;17219;17220;17221 17220 4 QGVHAAGAAEAGPLASVPAQSAK EHSQGLEKQGVHAAGA SVPAQSAKKPCPVSCE K Q G A K K 8 0 0 0 0 2 1 3 1 0 1 1 0 0 2 2 0 0 0 2 0 23 0 2087.076 Q96H79 Q96H79 269 291 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 3 0.0018434 50.132 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 6610200 1166500 1723800 1223800 0 0 2496000 5864 1390 5953 26100;26101;26102;26103 17222;17223;17224 17224 3 QGYVLSSIEGR CIRAFPNKQGYVLSSI VLSSIEGRVAVEYLDP K Q G G R V 0 1 0 0 0 1 1 2 0 1 1 0 0 0 0 2 0 0 1 1 0 11 0 1207.6197 O43684-2;O43684;B4DDM6 O43684-2 192 202 BUB3 Mitotic checkpoint protein BUB3 yes no 2 3.3081E-20 122.33 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 78880000 26315000 6932600 13589000 1826400 10278000 19939000 5865 719 5954 26104;26105;26106;26107;26108;26109 17225;17226;17227;17228;17229;17230 17226 6 QHGAVQSGGLNPELNDK KLLEHYGKQHGAVQSG LNPELNDKLSRGSVIN K Q H D K L 1 0 2 1 0 2 1 3 1 0 2 1 0 0 1 1 0 0 0 1 0 17 0 1762.8598 Q9UHF7;Q9UHF7-3;Q9UHF7-2;E5RJ97 Q9UHF7 458 474 TRPS1 Zinc finger transcription factor Trps1 yes no 3 0.029777 36.504 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2588500 0 0 820330 627550 0 1140600 5866 1594 5955 26110;26111;26112 17231 17231 1 QHMVNATPFK TRWSGIRKQHMVNATP MVNATPFKIARGQILK K Q H F K I 1 0 1 0 0 1 0 0 1 0 0 1 1 1 1 0 1 0 0 1 0 10 0 1171.5808 Q9H9L3 Q9H9L3 235 244 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 yes yes 2 0.0088952 77.533 By matching By matching By matching By matching By MS/MS By matching 1 1 13699000 0 0 0 0 5669000 8029500 5867 1509 5956 26113;26114 17232 17232 1 QHQNTMEDKFIVCLNK ELVAKQLKQHQNTMED KFIVCLNKVTKSFPPL K Q H N K V 0 0 2 1 1 2 1 0 1 1 1 2 1 1 0 0 1 0 0 1 0 16 1 2003.9557 P78527;E7EUY0;P78527-2 P78527 2351 2366 PRKDC DNA-dependent protein kinase catalytic subunit yes no 4 0.0008578 81.185 By matching By matching By matching By matching By matching By MS/MS 1 9044300 0 0 0 0 0 9044300 5868 1012 5957 26115 17233 17233 1 QICCHTYLLTNAVSSNGPSGNDTPEELRKK LGLLLRLRQICCHTYL TPEELRKKLIRKMKLI R Q I K K L 1 1 3 1 2 1 2 2 1 1 3 2 0 0 2 3 3 0 1 1 0 30 2 3388.614 Q14527;Q14527-2 Q14527 714 743 HLTF Helicase-like transcription factor yes no 5 2.769E-23 80.944 By matching By matching By matching By matching By matching By MS/MS 1 9810600 0 0 0 0 0 9810600 5869 1107 5958 26116 17234 17234 1 QIEEINEQIRKEK VGKAALEKQIEEINEQ NEQIRKEKEEAEARMR K Q I E K E 0 1 1 0 0 2 4 0 0 3 0 2 0 0 0 0 0 0 0 0 0 13 2 1655.8842 Q99543 Q99543 414 426 DNAJC2 DnaJ homolog subfamily C member 2 yes yes 3 0.012453 62.799 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 4772600 0 1430500 960580 0 923560 1458000 5870 1426 5959 26117;26118;26119;26120 17235 17235 1 QIEIQFAQGDR DRKWICGRQIEIQFAQ IQFAQGDRKTPNQMKA R Q I D R K 1 1 0 1 0 3 1 1 0 2 0 0 0 1 0 0 0 0 0 0 0 11 0 1303.6521 O75494-5;Q5JRI1;O75494-4;Q5JRI3;O75494-3;O75494-2;O75494;Q8WXF0 O75494-5 80 90 SRSF10;SRSF12 Serine/arginine-rich splicing factor 10;Serine/arginine-rich splicing factor 12 yes no 2 0.013086 61.235 By matching By MS/MS By matching By matching By matching By matching 1 1252900 0 1252900 0 0 0 0 5871 743 5960 26121 17236 17236 1 QIEIQFAQGDRK DRKWICGRQIEIQFAQ QFAQGDRKTPNQMKAK R Q I R K T 1 1 0 1 0 3 1 1 0 2 0 1 0 1 0 0 0 0 0 0 0 12 1 1431.747 O75494-5;Q5JRI1;O75494-4;Q5JRI3;O75494-3;O75494-2;O75494;Q8WXF0 O75494-5 80 91 SRSF10;SRSF12 Serine/arginine-rich splicing factor 10;Serine/arginine-rich splicing factor 12 yes no 3 0.0020634 66.538 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 7004300 451990 2759400 1228800 0 787470 1776600 5872 743 5961 26122;26123;26124;26125;26126 17237 17237 1 QIEIQFAQGDRKTPNQMK DRKWICGRQIEIQFAQ RKTPNQMKAKEGRNVY R Q I M K A 1 1 1 1 0 4 1 1 0 2 0 2 1 1 1 0 1 0 0 0 0 18 2 2131.0844 O75494-5;Q5JRI1;O75494-4;Q5JRI3;O75494-3;O75494-2;O75494 O75494-5 80 97 SRSF10 Serine/arginine-rich splicing factor 10 yes no 3;4 6.5082E-05 85.473 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 1 2 2 37820000 2923400 9761800 6641500 1366800 6262100 10865000 5873 743 5962 26127;26128;26129;26130;26131;26132;26133;26134;26135;26136;26137 17238;17239;17240;17241;17242;17243 17238 6 QIFQPSVQQQPTKPVK SPVASLPKQIFQPSVQ QQPTKPVKVTCANCKK K Q I V K V 0 0 0 0 0 5 0 0 0 1 0 2 0 1 3 1 1 0 0 2 0 16 1 1852.0207 Q9UBW7;Q9UBW7-2 Q9UBW7 313 328 ZMYM2 Zinc finger MYM-type protein 2 yes no 3 0.0026335 56.46 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 4776900 0 1441700 0 542030 861740 1931300 5874 1585 5963 26138;26139;26140;26141 17244 17244 1 QIGNVAALPGIVHR GGFLPAMKQIGNVAAL ALPGIVHRSIGLPDVH K Q I H R S 2 1 1 0 0 1 0 2 1 2 1 0 0 0 1 0 0 0 0 2 0 14 0 1443.831 Q9Y3I0;E7EQS9 Q9Y3I0 68 81 C22orf28;RTCB tRNA-splicing ligase RtcB homolog yes no 3 9.2723E-08 96.82 By matching By matching By MS/MS By matching By matching By matching 1 3880200 0 0 3880200 0 0 0 5875 1647 5964 26142 17245 17245 1 QILDPAAR RTFKESPKQILDPAAR QILDPAARVTGMKKWP K Q I A R V 2 1 0 1 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 0 0 8 0 882.49232 P46013;F5H4V4;P46013-2 P46013 1074 1081 MKI67 Antigen KI-67 no no 2 0.016902 82.426 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 23860000 216370 3076400 2732800 1025800 7100200 9708500 5876 919;920 5965 26143;26144;26145;26146;26147;26148 17246;17247;17248 17248 3 QILDPAARVTGMK RTFKESPKQILDPAAR AARVTGMKKWPRTPKE K Q I M K K 2 1 0 1 0 1 0 1 0 1 1 1 1 0 1 0 1 0 0 1 0 13 1 1398.7653 P46013;F5H4V4;P46013-2 P46013 1074 1086 MKI67 Antigen KI-67 no no 2;3 7.1456E-05 96.756 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 3 1 2 100030000 26071000 10954000 25932000 8967900 4516200 23588000 5877 919;920 5966 26149;26150;26151;26152;26153;26154;26155;26156;26157;26158;26159 17249;17250;17251;17252;17253;17254;17255;17256;17257 17253 8 QILDPAASVTGSR KAFKESPKQILDPAAS AASVTGSRRQLRTRKE K Q I S R R 2 1 0 1 0 1 0 1 0 1 1 0 0 0 1 2 1 0 0 1 0 13 0 1313.6939 P46013;F5H4V4;P46013-2 P46013 2531 2543 MKI67 Antigen KI-67 no no 2 7.5049E-06 99.941 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 11615000 0 2328700 0 1089700 0 8196200 5878 919;920 5967 26160;26161;26162;26163 17258;17259;17260;17261 17259 4 QILDPAASVTGSRR KAFKESPKQILDPAAS ASVTGSRRQLRTRKEK K Q I R R Q 2 2 0 1 0 1 0 1 0 1 1 0 0 0 1 2 1 0 0 1 0 14 1 1469.795 P46013;F5H4V4;P46013-2 P46013 2531 2544 MKI67 Antigen KI-67 no no 3 0.01763 40.516 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 27705000 0 0 2733100 373090 2451000 22148000 5879 919;920 5968 26164;26165;26166;26167 17262 17262 1 QILDPAASVTGSRRQLR KAFKESPKQILDPAAS TGSRRQLRTRKEKARA K Q I L R T 2 3 0 1 0 2 0 1 0 1 2 0 0 0 1 2 1 0 0 1 0 17 2 1867.0388 P46013;F5H4V4;P46013-2 P46013 2531 2547 MKI67 Antigen KI-67 no no 4 0.010794 41.743 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 29773000 0 0 6611500 3353800 3208500 16600000 5880 919;920 5969 26168;26169;26170;26171 17263 17263 1 QILDSAASLTGSK KAFMESPKQILDSAAS AASLTGSKRQLRTPKG K Q I S K R 2 0 0 1 0 1 0 1 0 1 2 1 0 0 0 3 1 0 0 0 0 13 0 1289.6827 P46013;F5H4V4;P46013-2 P46013 1682 1694 MKI67 Antigen KI-67 no no 2 2.2383E-131 157.5 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 105870000 30912000 14079000 36612000 0 22453000 1814900 5881 919;920 5970 26172;26173;26174;26175;26176 17264;17265;17266;17267;17268 17268 5 QIPQATASMK GMIMCLARQIPQATAS PQATASMKDGKWERKK R Q I M K D 2 0 0 0 0 2 0 0 0 1 0 1 1 0 1 1 1 0 0 0 0 10 0 1073.5539 O43175;Q5SZU1 O43175 120 129 PHGDH D-3-phosphoglycerate dehydrogenase yes no 2 0.020238 63.426 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5447900 0 867900 784450 0 1775400 2020100 5882 711 5971 26177;26178;26179;26180 17269 17269 1 QISGQYSGSPQLLK TVAAEVRKQISGQYSG SGSPQLLKNLNIVGNI K Q I L K N 0 0 0 0 0 3 0 2 0 1 2 1 0 0 1 3 0 0 1 0 0 14 0 1504.7886 Q96N67-4;Q96N67-3;Q96N67-5;Q96N67-2;Q96N67-6;Q96N67;Q96NI0 Q96N67-4 22 35 DOCK7 Dedicator of cytokinesis protein 7 yes no 2 3.1351E-06 88.092 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 7220000 1645000 795300 0 2173000 0 2606700 5883 1409 5972 26181;26182;26183;26184 17270;17271;17272;17273 17270 3 QISNLQQSISDAEQR SEIDNVKKQISNLQQS SISDAEQRGENALKDA K Q I Q R G 1 1 1 1 0 4 1 0 0 2 1 0 0 0 0 3 0 0 0 0 0 15 0 1715.8438 P04264;CON__P04264 P04264 418 432 KRT1 Keratin, type II cytoskeletal 1 yes no 2 0.008098 48.899 By matching By MS/MS By matching By matching By matching By matching 1 863450 0 863450 0 0 0 0 + 5884 789 5973 26185 17274 17274 1 QISYNYSDLDQSNVTEETPEGEEHHPVADTENK ESPKYIQKQISYNYSD PVADTENKENEVEEVK K Q I N K E 1 0 3 3 0 2 6 1 2 1 1 1 0 0 2 3 3 0 2 2 0 33 0 3774.6405 Q8NC51;Q8NC51-2 Q8NC51 241 273 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein yes no 4 6.79E-41 86.191 By matching By matching By matching By matching By matching By MS/MS 1 9936700 0 0 0 0 0 9936700 5885 1316 5974 26186 17275 17275 1 QITAQAWDGTTDYQVEETSRER DGRWFGGRQITAQAWD VEETSREREERLRGWE R Q I E R E 2 2 0 2 0 3 3 1 0 1 0 0 0 0 0 1 4 1 1 1 0 22 1 2583.1837 O43719;E9PFP2 O43719 341 362 HTATSF1 HIV Tat-specific factor 1 yes no 3 5.9989E-06 62.916 By matching By MS/MS By matching By matching By matching By matching 1 1898100 0 1898100 0 0 0 0 5886 720 5975 26187 17276 17276 1 QITQSALLAEAR FTSEIGTKQITQSALL SALLAEARSDYSEAAK K Q I A R S 3 1 0 0 0 2 1 0 0 1 2 0 0 0 0 1 1 0 0 0 0 12 0 1299.7147 P78527;E7EUY0;P78527-2 P78527 2951 2962 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.0019188 86.262 By matching By MS/MS By matching By matching By matching By matching 1 1 2438000 0 2206700 0 231300 0 0 5887 1012 5976 26188;26189 17277 17277 1 QITVNDLPVGR IDDKGILRQITVNDLP VNDLPVGRSVDETLRL R Q I G R S 0 1 1 1 0 1 0 1 0 1 1 0 0 0 1 0 1 0 0 2 0 11 0 1210.667 Q06830 Q06830 141 151 PRDX1 Peroxiredoxin-1 no no 2 5.9465E-42 134.38 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 2 94131000 20775000 40873000 18830000 7225800 6427500 0 5888 1044 5977 26190;26191;26192;26193;26194;26195 17278;17279;17280;17281;17282 17281 5 QKGTEGMEPEEGVTVESQPQVK SPTKKRKRQKGTEGME VESQPQVKVEPLEEAI R Q K V K V 0 0 0 0 0 3 5 3 0 0 0 2 1 0 2 1 2 0 0 3 0 22 1 2386.1322 O15446;O15446-2 O15446 293 314 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes no 3 0.014763 37.169 By MS/MS By matching By matching By matching By matching By matching 1 1699300 1699300 0 0 0 0 0 5889 706 5978 26196 17283 17283 1 QKLQLEK LEEEESARQKLQLEKV RQKLQLEKVTTEAKLK R Q K E K V 0 0 0 0 0 2 1 0 0 0 2 2 0 0 0 0 0 0 0 0 0 7 1 885.52837 P35579;P35579-2;Q7Z406-5;F2Z2S7;Q7Z406-4;F2Z2U9;Q3MIV8;P35749-3;P35749;P35580;P35749-2;P35580-2;F8W6L6;Q7Z406;P35580-3;Q7Z406-6;F8VTL3;F2Z2U8;B1PS43;Q7Z406-2;G8JLL9 P35579 960 966 MYH9;MYH14;MYH11;MYH10 Myosin-9;Myosin-14;Myosin-11;Myosin-10 yes no 2 0.040305 89.55 By matching By matching By MS/MS By matching By matching By matching 1 1 1 23211000 0 7849700 11738000 0 3624000 0 5890 900 5979 26197;26198;26199 17284 17284 1 QKPMNVGLSETQNGGMSQEAVGNIK SRKVKKSKQKPMNVGL QEAVGNIKVTKSPQKS K Q K I K V 1 0 3 0 0 3 2 4 0 1 1 2 2 0 1 2 1 0 0 2 0 25 1 2616.2636 Q9NVP1 Q9NVP1 58 82 DDX18 ATP-dependent RNA helicase DDX18 yes yes 3 5.82E-116 125.37 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 50011000 16227000 0 0 0 2436700 31348000 5891 1550 5980 26200;26201;26202 17285;17286;17287 17287 3 QLAEDFLK ATWPKEVRQLAEDFLK QLAEDFLKDYIHINIG R Q L L K D 1 0 0 1 0 1 1 0 0 0 2 1 0 1 0 0 0 0 0 0 0 8 0 962.5073 P17844;E7ETL9 P17844 288 295 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 2 0.0091649 101.72 By matching By matching By matching By matching By matching By MS/MS 1 24200000 0 0 0 0 0 24200000 5892 853 5981 26203 17288 17288 1 QLAIGVNEVTR WTPAHVRKQLAIGVNE IGVNEVTRALERRELL K Q L T R A 1 1 1 0 0 1 1 1 0 1 1 0 0 0 0 0 1 0 0 2 0 11 0 1198.667 Q5VUC9;Q5VUC3;P78345 Q5VUC9 112 122 RPP38 Ribonuclease P protein subunit p38 yes no 2 0.00033456 97.779 By matching By matching By matching By matching By matching By MS/MS 1 1 3520300 0 0 0 234160 0 3286200 5893 1009 5982 26204;26205 17289 17289 1 QLAVISPEK RIAENLPKQLAVISPE LAVISPEKYDIKCAVS K Q L E K Y 1 0 0 0 0 1 1 0 0 1 1 1 0 0 1 1 0 0 0 1 0 9 0 983.56515 Q96KR1;B5MEH6;H0Y8W1 Q96KR1 831 839 ZFR Zinc finger RNA-binding protein yes no 2 0.0019485 126.31 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 28450000 5294900 6983700 2804200 2316300 4644700 6406400 5894 1403 5983 26206;26207;26208;26209;26210;26211 17290;17291;17292 17291 2 QLAVISPEKYDIK RIAENLPKQLAVISPE SPEKYDIKCAVSEAAI K Q L I K C 1 0 0 1 0 1 1 0 0 2 1 2 0 0 1 1 0 0 1 1 0 13 1 1502.8344 Q96KR1;B5MEH6;H0Y8W1 Q96KR1 831 843 ZFR Zinc finger RNA-binding protein yes no 3 0.0015501 75.088 By matching By matching By matching By MS/MS By matching By matching 1 3860300 0 0 0 3860300 0 0 5895 1403 5984 26212 17293 17293 1 QLCGGSQAAIER VDSSQLRRQLCGGSQA GSQAAIERMIHFGREL R Q L E R M 2 1 0 0 1 2 1 2 0 1 1 0 0 0 0 1 0 0 0 0 0 12 0 1288.6194 Q96S59-2;B2R8E1;Q96S59 Q96S59-2 267 278 RANBP9 Ran-binding protein 9 yes no 2 0.0040879 65.895 By matching By matching By matching By matching By matching By MS/MS 1 1 1473700 0 270470 0 0 0 1203300 5896 69 5985 26213;26214 17294 17294 1 QLDECASAITK DKLDKINKQLDECASA ECASAITKAQVAIKTA K Q L T K A 2 0 0 1 1 1 1 0 0 1 1 1 0 0 0 1 1 0 0 0 0 11 0 1234.5864 E9PD53;Q9NTJ3;Q9NTJ3-2;F5H0U7 E9PD53 887 897 SMC4 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 4 yes no 2 0.033078 50.484 By matching By matching By matching By matching By MS/MS By matching 1 1 1 2673400 0 0 536990 0 628530 1507900 5897 419 5986 26215;26216;26217 17295 17295 1 QLEEEQAVRPK KDIYAYLRQLEEEQAV EEQAVRPKYLLGREVT R Q L P K Y 1 1 0 0 0 2 3 0 0 0 1 1 0 0 1 0 0 0 0 1 0 11 1 1325.6939 E9PC90;P14635;Q5TZP9 E9PC90 180 190 CCNB1 G2/mitotic-specific cyclin-B1 yes no 2 0.0039795 91.313 By matching By matching By matching By matching By matching By MS/MS 1 1 1 866110 0 134130 0 0 259940 472040 5898 413 5987 26218;26219;26220 17296 17296 1 QLEEPGAGTPSPVR SGSGMPSRQLEEPGAG AGTPSPVRLHALAGFQ R Q L V R L 1 1 0 0 0 1 2 2 0 0 1 0 0 0 3 1 1 0 0 1 0 14 0 1436.726 C9JJU9;Q96P11-2;G3V0G9;Q96P11;Q96P11-4;Q63ZY6;Q63ZY6-5;Q63ZY6-4 C9JJU9 279 292 NSUN5;NSUN5P2 Putative methyltransferase NSUN5;Putative methyltransferase NSUN5C yes no 2 0.0041826 58.079 By matching By matching By matching By matching By matching By MS/MS 1 868200 0 0 0 0 0 868200 5899 255 5988 26221 17297 17297 1 QLETKQETHCQSTPLKK KGGNSKSKQLETKQET CQSTPLKKHQGVSKTQ K Q L K K H 0 0 0 0 1 3 2 0 1 0 2 3 0 0 1 1 3 0 0 0 0 17 2 2055.0419 Q9NQW6;Q9NQW6-2 Q9NQW6 460 476 ANLN Actin-binding protein anillin yes no 4 0.010387 42.095 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 17610000 3570600 0 8756000 0 0 5283100 5900 1533 5989 26222;26223;26224 17298;17299 17299 2 QLFHPEQLITGK EVRTGTYRQLFHPEQL PEQLITGKEDAANNYA R Q L G K E 0 0 0 0 0 2 1 1 1 1 2 1 0 1 1 0 1 0 0 0 0 12 0 1409.7667 G3V1U9;Q9BQE3;Q71U36;P68363;F5H5D3;Q6PEY2;Q13748;E9PGK3;Q13748-2;F8VVB9;Q9NY65-2;Q9NY65;C9J2C0;F8VQQ4;F8VX09;F8VWV9;F8VRZ4;F8VS66;C9K0S6;C9JDL2;C9JEV8;C9JQ00;C9JJQ8;A8MUB1;P68366 G3V1U9 50 61 TUBA1A;TUBA1C;TUBA1B;TUBA3E;TUBA3C;TUBA8;TUBA4A Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain;Tubulin alpha-4A chain no no 3 0.0015578 84.605 By matching By matching By matching By matching By matching By MS/MS 1 23549000 0 0 0 0 0 23549000 5901 518;44 5990 26225 17300 17300 1 QLIIDAGQK EAEKTDEKQLIIDAGQ LIIDAGQKRFGAVSCN K Q L Q K R 1 0 0 1 0 2 0 1 0 2 1 1 0 0 0 0 0 0 0 0 0 9 0 984.5604 Q5FWF5;Q5FWF5-2 Q5FWF5 604 612 ESCO1 N-acetyltransferase ESCO1 yes no 2 0.018956 70.399 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 15212000 1287800 2110500 2387400 1631600 2446800 5347400 5902 1180 5991 26226;26227;26228;26229;26230;26231 17301;17302;17303;17304 17301 4 QLILEGKDPDLEAK KKEINKRKQLILEGKD KDPDLEAKRKAELAKI K Q L A K R 1 0 0 2 0 1 2 1 0 1 3 2 0 0 1 0 0 0 0 0 0 14 1 1567.8457 Q9Y6V7 Q9Y6V7 415 428 DDX49 Probable ATP-dependent RNA helicase DDX49 yes yes 3 0.002991 61.532 By MS/MS By matching By matching By matching By matching By matching 1 7429900 7429900 0 0 0 0 0 5903 1662 5992 26232 17305 17305 1 QLIVGVNK LAYTLGVKQLIVGVNK QLIVGVNKMDSTEPPY K Q L N K M 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 0 2 0 8 0 869.53345 Q5VTE0;P68104;F8W6I0;Q05639 Q5VTE0 147 154 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2 0.0097754 92.47 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 323420000 18339000 27261000 20446000 15152000 59651000 182570000 5904 1006 5993 26233;26234;26235;26236;26237;26238 17306;17307;17308;17309 17308 4 QLKEELRLEEAK EERERMIKQLKEELRL ELRLEEAKLVLLKKLR K Q L A K L 1 1 0 0 0 1 4 0 0 0 3 2 0 0 0 0 0 0 0 0 0 12 2 1484.8199 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7;C9JHD7;C9JJK9 Q86YP4 147 158 GATAD2A Transcriptional repressor p66-alpha yes no 3 0.0056112 79.07 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 13779000 0 2422300 6354800 793770 0 4207800 5905 170 5994 26239;26240;26241;26242 17310 17310 1 QLLNLVVIGHVDAGK LEKRQGGKQLLNLVVI IGHVDAGKSTLMGHML K Q L G K S 1 0 1 1 0 1 0 2 1 1 3 1 0 0 0 0 0 0 0 3 0 15 0 1574.9144 E9PS53;E9PHZ9;B7Z524;H0YDX7;Q9Y450-4;Q9Y450 E9PS53 95 109 HBS1L HBS1-like protein yes no 3 0.0031491 55.899 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 10243000 0 1402000 992040 554400 2806800 4487900 5906 189 5995 26243;26244;26245;26246;26247 17311 17311 1 QLMGQVLAK CFEDPEWKQLMGQVLA LMGQVLAKVTENLRVL K Q L A K V 1 0 0 0 0 2 0 1 0 0 2 1 1 0 0 0 0 0 0 1 0 9 0 986.55829 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 974 982 MYBBP1A Myb-binding protein 1A yes no 2 0.027933 65.465 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 12656000 0 2032200 0 679960 2015000 7929300 5907 682 5996 26248;26249;26250;26251 17312;17313 17312 2 QLNAIESTK DVPDQNSKQLNAIEST LNAIESTKIESHETAN K Q L T K I 1 0 1 0 0 1 1 0 0 1 1 1 0 0 0 1 1 0 0 0 0 9 0 1002.5346 Q92576-2;Q92576;E7EVH3;E9PE34;B3KP41;D6R9X2 Q92576-2 362 370 PHF3 PHD finger protein 3 yes no 2 0.016241 73.841 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 7667400 550180 1952300 4501200 0 663680 0 5908 1353 5997 26252;26253;26254;26255 17314;17315;17316 17316 3 QLNAIESTKIESHETANLQDDRNSQSSSVSYLESK DVPDQNSKQLNAIEST SVSYLESKSVKSKHTK K Q L S K S 2 1 3 2 0 3 4 0 1 2 3 2 0 0 0 8 2 0 1 1 0 35 2 3907.8672 Q92576-2;Q92576;E7EVH3;E9PE34;B3KP41;D6R9X2 Q92576-2 362 396 PHF3 PHD finger protein 3 yes no 4;5 0.00026566 34.824 By matching By matching By matching By MS/MS By matching By matching 1 2 32691000 0 12055000 0 20636000 0 0 5909 1353 5998 26256;26257;26258 17317;17318 17318 2 QLPAQPPEHAVDGEGFK EYVAAQLRQLPAQPPE AVDGEGFKNTLETSSL R Q L F K N 2 0 0 1 0 2 2 2 1 0 1 1 0 1 3 0 0 0 0 1 0 17 0 1818.8901 Q14151;B4DU53 Q14151 172 188 SAFB2 Scaffold attachment factor B2 yes no 3 0.036455 35.089 By matching By matching By matching By matching By MS/MS By matching 1 1 1 8698100 550490 0 0 0 2140800 6006900 5910 1097 5999 26259;26260;26261 17319 17319 1 QLPEPLLASSGHC STLRNLFKQLPEPLLA LLASSGHC________ K Q L H C - 1 0 0 0 1 1 1 1 1 0 3 0 0 0 2 2 0 0 0 0 0 13 0 1407.6816 P17676 P17676 333 345 CEBPB CCAAT/enhancer-binding protein beta yes yes 2 3.0882E-05 96.229 By matching By matching By matching By matching By MS/MS By matching 1 7440000 0 0 0 0 7440000 0 5911 851 6000 26262 17320 17320 1 QLPLEPESPSGQVGPRPAPPQEESPSSEAK MKNATSSKQLPLEPES ESPSSEAKSRGPTPPA K Q L A K S 2 1 0 0 0 3 5 2 0 0 2 1 0 0 8 5 0 0 0 1 0 30 1 3124.5313 Q3KQU3-2;Q3KQU3-4;Q3KQU3;E9PLH3;C9JIR3 Q3KQU3-2 63 92 MAP7D1 MAP7 domain-containing protein 1 yes no 3 0.00020774 38.986 By matching By MS/MS By matching By matching By matching By matching 1 4906600 0 4906600 0 0 0 0 5912 1165 6001 26263 17321 17321 1 QLPPNGDPNFK GAFVEISRQLPPNGDP PNGDPNFKLFIIRGSP R Q L F K L 0 0 2 1 0 1 0 1 0 0 1 1 0 1 3 0 0 0 0 0 0 11 0 1225.6091 Q92945-2;Q92945 Q92945-2 463 473 KHSRP Far upstream element-binding protein 2 yes no 2 1.1746E-29 126.71 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 4 4 4 7 4 228350000 35359000 28626000 25425000 14723000 63193000 61025000 5913 1366 6002 26264;26265;26266;26267;26268;26269;26270;26271;26272;26273;26274;26275;26276;26277;26278;26279;26280;26281;26282;26283;26284;26285;26286;26287;26288;26289;26290 17322;17323;17324;17325;17326;17327;17328;17329;17330;17331;17332;17333;17334;17335;17336;17337;17338;17339;17340;17341;17342;17343;17344;17345;17346 17329 25 QLPSLACKYPVSSR EEWQQVDRQLPSLACK CKYPVSSREATQILSV R Q L S R E 1 1 0 0 1 1 0 0 0 0 2 1 0 0 2 3 0 0 1 1 0 14 1 1604.8345 P42166 P42166 512 525 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2;3 0.0015255 68.972 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 24601000 5015800 6133200 0 1157400 2286000 10009000 5914 913 6003 26291;26292;26293;26294;26295 17347;17348;17349 17349 3 QLQATSVPHPVSRPLNNTQK PVQNQKQKQLQATSVP RPLNNTQKSKQPLPSA K Q L Q K S 1 1 2 0 0 3 0 0 1 0 2 1 0 0 3 2 2 0 0 2 0 20 1 2214.1869 O14965;A3KFJ0;Q5QPD4;A3KFJ1;Q5QPD2;Q5QPD1 O14965 78 97 AURKA Aurora kinase A yes no 3;4 0.0001296 79.676 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 3 308170000 18975000 62144000 60630000 20751000 37925000 107740000 5915 698 6004 26296;26297;26298;26299;26300;26301;26302;26303;26304;26305;26306;26307;26308;26309 17350;17351;17352;17353;17354;17355;17356;17357 17356 8 QLQEEDLKAQAQLQK QHDLQVAKQLQEEDLK KAQAQLQKRYKDLEQQ K Q L Q K R 2 0 0 1 0 5 2 0 0 0 3 2 0 0 0 0 0 0 0 0 0 15 1 1768.9319 Q8IVM0;Q8IVM0-2 Q8IVM0 61 75 CCDC50 Coiled-coil domain-containing protein 50 yes no 3 1.6441E-13 103.97 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 13391000 2104400 2254000 2979500 1015400 2021400 3016300 5916 1277 6005 26310;26311;26312;26313;26314;26315 17358;17359;17360;17361 17359 4 QLREQVNDLFSRK LSKVEKARQLREQVND VNDLFSRKFGEAIGMG R Q L R K F 0 2 1 1 0 2 1 0 0 0 2 1 0 1 0 1 0 0 0 1 0 13 2 1631.8744 P78347-2;P78347-4;P78347-3;B4DH52;P78347;H7BYM4;G8JLD9;Q86UP8-3;Q86UP8;Q6EKJ0 P78347-2 826 838 GTF2I;GTF2IRD2B;GTF2IRD2 General transcription factor II-I;General transcription factor II-I repeat domain-containing protein 2A;General transcription factor II-I repeat domain-containing protein 2B yes no 3 0.020044 59.294 By matching By matching By matching By matching By matching By MS/MS 1 1389300 0 0 0 0 0 1389300 5917 90 6006 26316 17362 17362 1 QLRGAQYQPILRDHICK EPQSWFQRQLRGAQYQ ILRDHICKDMSALVAA R Q L C K D 1 2 0 1 1 3 0 1 1 2 2 1 0 0 1 0 0 0 1 0 0 17 2 2095.1109 F5GX68 F5GX68 1399 1415 DNMT1 Cytosine-specific methyltransferase no no 3 0.017734 46.68 By matching By matching By matching By matching By matching By MS/MS 1 1229700 0 0 0 0 0 1229700 5918 487 6007 26317 17363 17363 1 QLSAQSYGVTSSTAR VRRQMKAKQLSAQSYG GVTSSTARRILQSLEK K Q L A R R 2 1 0 0 0 2 0 1 0 0 1 0 0 0 0 4 2 0 1 1 0 15 0 1554.7638 P49790;F6QR24;Q4LE47 P49790 295 309 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 2 0.0023565 66.436 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 5802300 3569600 0 0 2232700 0 0 5919 531 6008 26318;26319 17364;17365 17364 2 QLSAQSYGVTSSTARR VRRQMKAKQLSAQSYG VTSSTARRILQSLEKM K Q L R R I 2 2 0 0 0 2 0 1 0 0 1 0 0 0 0 4 2 0 1 1 0 16 1 1710.8649 P49790;F6QR24;Q4LE47 P49790 295 310 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 3 0.038865 32.152 By MS/MS By matching By matching By matching By matching By matching 1 4407700 4407700 0 0 0 0 0 5920 531 6009 26320 17366 17366 1 QLSGQSTSSDTTYKGGASEK EDQGERVRQLSGQSTS YKGGASEKAGSSPAQG R Q L E K A 1 0 0 1 0 2 1 3 0 0 1 2 0 0 0 5 3 0 1 0 0 20 1 2030.9393 Q9UGU0-2;Q9UGU0 Q9UGU0-2 536 555 TCF20 Transcription factor 20 yes no 3 0.010528 40.968 By matching By matching By matching By matching By matching By MS/MS 1 546870 0 0 0 0 0 546870 5921 1591 6010 26321 17367;17368 17368 2 QLTQTTHTDKVPGDEDK VEELSALKQLTQTTHT KVPGDEDKGINVFRET K Q L D K G 0 0 0 3 0 2 1 1 1 0 1 2 0 0 1 0 4 0 0 1 0 17 1 1911.9174 P46013;F5H4V4;P46013-2 P46013 2139 2155 MKI67 Antigen KI-67 no no 3 0.0088044 44.391 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 2224400 0 613120 0 129900 368020 1113400 5922 919;920 6011 26322;26323;26324;26325 17369 17369 1 QLTSNTVQQHPSTPK SNRGVSEKQLTSNTVQ QQHPSTPKRHTVLYIS K Q L P K R 0 0 1 0 0 3 0 0 1 0 1 1 0 0 2 2 3 0 0 1 0 15 0 1664.8482 O94916-2;O94916-3;O94916;O94916-4;E9PHR7 O94916-2 47 61 NFAT5 Nuclear factor of activated T-cells 5 yes no 3 0.0001186 87.824 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 6734100 1679900 0 660030 0 2385600 2008500 5923 440 6012 26326;26327;26328;26329 17370 17370 1 QLTSSELLQR SVALYLVRQLTSSELL TSSELLQRLKTIGVKH R Q L Q R L 0 1 0 0 0 2 1 0 0 0 3 0 0 0 0 2 1 0 0 0 0 10 0 1173.6354 Q8N2W9 Q8N2W9 278 287 PIAS4 E3 SUMO-protein ligase PIAS4 yes yes 2 0.013063 69.672 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 5457100 0 0 598690 0 533630 4324800 5924 1295 6013 26330;26331;26332 17371;17372;17373 17373 3 QLVSKPLSSSVSNNK QKPSVHSRQLVSKPLS SSSVSNNKRIVSTKGK R Q L N K R 0 0 2 0 0 1 0 0 0 0 2 2 0 0 1 5 0 0 0 2 0 15 1 1586.8628 Q96MU7-2;Q96MU7 Q96MU7-2 68 82 YTHDC1 YTH domain-containing protein 1 yes no 3 7.5958E-21 110.25 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 31011000 3201800 4867600 5519800 3831200 6425200 7165000 5925 1407 6014 26333;26334;26335;26336;26337;26338 17374;17375 17374 2 QMAAEEAMK APSKKVAKQMAAEEAM MAAEEAMKALHGEATN K Q M M K A 3 0 0 0 0 1 2 0 0 0 0 1 2 0 0 0 0 0 0 0 0 9 0 1007.4416 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 670 678 ADAR Double-stranded RNA-specific adenosine deaminase no no 2 1.5995E-06 114.51 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 23976000 2056000 5742300 8534700 1678000 2059700 3905100 5926 352;968 6015 26339;26340;26341;26342;26343;26344 17376;17377 17377 2 QMGNLEDAETK VTPSDLQKQMGNLEDA NLEDAETKDLLVAAEA K Q M T K D 1 0 1 1 0 1 2 1 0 0 1 1 1 0 0 0 1 0 0 0 0 11 0 1234.55 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 1376 1386 AHCTF1 Protein ELYS yes no 2 4.1134E-20 121.68 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 2 11350000 0 1620400 1881100 1179400 2468500 4200600 5927 1345 6016 26345;26346;26347;26348;26349;26350 17378;17379;17380;17381 17381 4 QMLDPANYGTGMER KAFKESAKQMLDPANY NYGTGMERWPRTPKEE K Q M E R W 1 1 1 1 0 1 1 2 0 0 1 0 2 0 1 0 1 0 1 0 0 14 0 1581.6916 P46013;F5H4V4;P46013-2 P46013 2048 2061 MKI67 Antigen KI-67 no no 2 0.001978 66.059 By matching By matching By matching By matching By matching By MS/MS 1 2268900 0 0 0 0 0 2268900 5928 919;920 6017 26351 17382 17382 1 QMLDPANYGTGMERWPRTPK KAFKESAKQMLDPANY ERWPRTPKEEAQSLED K Q M P K E 1 2 1 1 0 1 1 2 0 0 1 1 2 0 3 0 2 1 1 0 0 20 2 2347.1202 P46013;F5H4V4;P46013-2 P46013 2048 2067 MKI67 Antigen KI-67 no no 4 0.020976 35.672 By matching By matching By matching By MS/MS By matching By matching 1 7560700 0 0 0 7560700 0 0 5929 919;920 6018 26352 17383 17383 1 QMPLSSAGLQNSVAK QGTSALIRQMPLSSAG GLQNSVAKRKTDKERS R Q M A K R 2 0 1 0 0 2 0 1 0 0 2 1 1 0 1 3 0 0 0 1 0 15 0 1529.7872 Q8IWC1-2;Q8IWC1;H7BY77 Q8IWC1-2 199 213 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.0035379 56.514 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 14393000 3281600 1760200 5664900 0 801620 2884500 5930 1280 6019 26353;26354;26355;26356;26357 17384;17385;17386 17386 3 QMTCTDINTLTR IGKLKTEKQMTCTDIN TDINTLTRQKELLLQK K Q M T R Q 0 1 1 1 1 1 0 0 0 1 1 0 1 0 0 0 4 0 0 0 0 12 0 1452.6701 Q5BJF6-8;Q5BJF6-5;Q5BJF6-6;B4DX73;Q5BJF6-7;Q5BJF6-2;Q5BJF6-3;Q5BJF6-4;Q5BJF6;Q5T4C3;Q5T4C6;Q5BJF6-9 Q5BJF6-8 221 232 ODF2 Outer dense fiber protein 2 yes no 2 0.0038334 67.519 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1950600 401890 0 376880 0 0 1171800 5931 137 6020 26358;26359;26360 17387 17387 1 QMVGGQQLPALAAK PGLVKQAKQMVGGQQL QLPALAAKSGQSFRSL K Q M A K S 3 0 0 0 0 3 0 2 0 0 2 1 1 0 1 0 0 0 0 1 0 14 0 1410.7653 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 2313 2326 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 2 5.2708E-20 109.15 By matching By MS/MS By matching By matching By matching By matching 1 1 14958000 0 13668000 0 1290700 0 0 5932 1404 6021 26361;26362 17388 17388 1 QNLVPFRDSK QNQQNRSKQNLVPFRD LVPFRDSKLTRVFQGF K Q N S K L 0 1 1 1 0 1 0 0 0 0 1 1 0 1 1 1 0 0 0 1 0 10 1 1202.6408 O95235;B4DL79 O95235 454 463 KIF20A Kinesin-like protein KIF20A yes no 3 0.020644 60.102 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4597600 0 0 866060 674430 971140 2086000 5933 767 6022 26363;26364;26365;26366 17389 17389 1 QNQTTAISTPASSEISKAPK IACQCPSKQNQTTAIS SEISKAPKSGFEGMFI K Q N P K S 3 0 1 0 0 2 1 0 0 2 0 2 0 0 2 4 3 0 0 0 0 20 1 2058.0593 P49792 P49792 1753 1772 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 3 0.00014385 66.261 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 20498000 0 4051400 3116500 2325400 5059400 5945100 5934 945 6023 26367;26368;26369;26370;26371 17390;17391;17392 17392 3 QNQTTSAVSTPASSETSKAPK IACQNPGKQNQTTSAV SETSKAPKSGFEGMFT K Q N P K S 3 0 1 0 0 2 1 0 0 0 0 2 0 0 2 5 4 0 0 1 0 21 1 2119.0393 P49792 P49792 1635 1655 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 3 0.0026458 50.884 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 13478000 3693600 201610 1298600 2073500 0 6210700 5935 945 6024 26372;26373;26374;26375;26376;26377 17393;17394;17395;17396;17397 17396 4 QNSVQEQPGTACLSK DVNHSFAKQNSVQEQP PGTACLSKFSSASGAS K Q N S K F 1 0 1 0 1 3 1 1 0 0 1 1 0 0 1 2 1 0 0 1 0 15 0 1645.773 Q9NQW6;Q9NQW6-2 Q9NQW6 223 237 ANLN Actin-binding protein anillin yes no 2;3 1.0784E-86 139.21 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 109450000 18444000 16403000 18693000 11890000 15814000 28202000 5936 1533 6025 26378;26379;26380;26381;26382;26383;26384;26385;26386;26387;26388;26389 17398;17399;17400;17401;17402;17403;17404;17405;17406;17407 17401 9 QNYIEDLQNGPIRK CRGHCLERQNYIEDLQ LQNGPIRKNWNSSVPR R Q N R K N 0 1 2 1 0 2 1 1 0 2 1 1 0 0 1 0 0 0 1 0 0 14 1 1686.8689 O75319 O75319 193 206 DUSP11 RNA/RNP complex-1-interacting phosphatase yes yes 3 1.8678E-86 140.45 By matching By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 30201000 0 8678100 0 2238700 2175400 17109000 5937 739 6026 26390;26391;26392;26393;26394 17408;17409;17410 17409 3 QQASHYLYVR IPIKFSEKQQASHYLY ASHYLYVRAHGVRQGT K Q Q V R A 1 1 0 0 0 2 0 0 1 0 1 0 0 0 0 1 0 0 2 1 0 10 0 1263.636 Q9Y3A4 Q9Y3A4 34 43 RRP7A Ribosomal RNA-processing protein 7 homolog A yes yes 3 0.004416 86.882 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 55595000 3356400 5111000 4033500 2005100 15290000 25799000 5938 1643 6027 26395;26396;26397;26398;26399;26400 17411;17412;17413 17413 3 QQHEAAALNAVQR MKTCLLMRQQHEAAAL AALNAVQRMEWQLKVQ R Q Q Q R M 4 1 1 0 0 3 1 0 1 0 1 0 0 0 0 0 0 0 0 1 0 13 0 1434.7328 Q6UB99;H3BVB8;Q6UB98-2;Q6UB98 Q6UB99 2609 2621 ANKRD11;ANKRD12 Ankyrin repeat domain-containing protein 11;Ankyrin repeat domain-containing protein 12 yes no 3 0.01558 49.356 By matching By matching By matching By matching By matching By MS/MS 1 1450600 0 0 0 0 0 1450600 5939 1236 6028 26401 17414 17414 1 QQHLSQAFINQHTVER EDGKPKEKQQHLSQAF INQHTVERKGKQICKY K Q Q E R K 1 1 1 0 0 4 1 0 2 1 1 0 0 1 0 1 1 0 0 1 0 16 0 1934.9711 Q8N5P1 Q8N5P1 176 191 ZC3H8 Zinc finger CCCH domain-containing protein 8 yes yes 4 0.0022608 55.415 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5108900 1642800 0 808640 0 1159400 1498100 5940 1304 6029 26402;26403;26404;26405 17415 17415 1 QQIQSIQQSIER IKEGSQLKQQIQSIQQ SIQQSIERLLV_____ K Q Q E R L 0 1 0 0 0 5 1 0 0 3 0 0 0 0 0 2 0 0 0 0 0 12 0 1456.7634 P55769;B1AHD1 P55769 114 125 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes no 2 0.00092463 92.856 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 17249000 3627300 3315700 1589200 1522700 705260 6489200 5941 969 6030 26406;26407;26408;26409;26410;26411 17416;17417;17418;17419;17420 17418 5 QQLALYTEK KQQETHLKQQLALYTE QLALYTEKFEEFQNTL K Q Q E K F 1 0 0 0 0 2 1 0 0 0 2 1 0 0 0 0 1 0 1 0 0 9 0 1092.5815 P40222 P40222 385 393 TXLNA Alpha-taxilin yes yes 2 0.039895 60.064 By matching By MS/MS By matching By matching By matching By matching 1 1 3103300 0 2093000 1010300 0 0 0 5942 907 6031 26412;26413 17421 17421 1 QQNELAELHANLAR HSELQISRQQNELAEL ELHANLARALQQVQEK R Q Q A R A 3 1 2 0 0 2 2 0 1 0 3 0 0 0 0 0 0 0 0 0 0 14 0 1605.8223 Q14980-2;Q14980 Q14980-2 870 883 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.014555 46.282 By matching By matching By matching By matching By matching By MS/MS 1 8095300 0 0 0 0 0 8095300 5943 1121 6032 26414 17422 17422 1 QQPPEPEWIGDGESTSPSDKVVK ________________ SPSDKVVKKGKKDKKI K Q Q V K K 0 0 0 2 0 2 3 2 0 1 0 2 0 0 4 3 1 1 0 2 0 23 1 2509.1973 E9PC67;F8VQZ0;Q5STZ8;Q8NE71;Q8NE71-2;Q5STZ7 Q8NE71 7 29 ABCF1 ATP-binding cassette sub-family F member 1 no no 3 1.908E-08 73.796 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 30510000 0 5213800 0 5804700 4402300 15090000 5944 1321;411 6033 26415;26416;26417;26418 17423;17424;17425;17426 17424 4 QQPPLAQPSASPYPEAVELQRR RGGGGGRRQQPPLAQP EAVELQRRSLPIFQAR R Q Q R R S 3 2 0 0 0 4 2 0 0 0 2 0 0 0 5 2 0 0 1 1 0 22 1 2461.2714 Q9H6R0;Q05BE5;I3L0M5 Q9H6R0 51 72 DHX33 Putative ATP-dependent RNA helicase DHX33 yes no 3 0.0014801 48.376 By matching By matching By matching By matching By MS/MS By matching 1 2046000 0 0 0 0 2046000 0 5945 1496 6034 26419 17427 17427 1 QQPQPSQTESPQEAQIIQAK RSSRLQAKQQPQPSQT EAQIIQAKKRKTTQFT K Q Q A K K 2 0 0 0 0 7 2 0 0 2 0 1 0 0 3 2 1 0 0 0 0 20 0 2235.1131 E5RHN2;E5RK20;O96020-2;Q8WUE3;O96020 E5RHN2 12 31 CCNE2 G1/S-specific cyclin-E2 yes no 3 0.0014529 51.524 By matching By matching By MS/MS By matching By matching By matching 1 1 1 3580600 0 917650 1265400 0 0 1397600 5946 341 6035 26420;26421;26422 17428 17428 1 QQQLVSGMAER QKRIEEWKQQQLVSGM LVSGMAERNANFEALP K Q Q E R N 1 1 0 0 0 3 1 1 0 0 1 0 1 0 0 1 0 0 0 1 0 11 0 1245.6136 Q8N3X1;Q8N3X1-2 Q8N3X1 983 993 FNBP4 Formin-binding protein 4 yes no 2 0.0082479 67.385 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4924200 830680 610140 0 0 1794300 1689000 5947 1298 6036 26423;26424;26425;26426 17429;17430 17429 2 QQQMAALTKEK MFYNDVKKQQQMAALT MAALTKEKDQLSQSIV K Q Q E K D 2 0 0 0 0 3 1 0 0 0 1 2 1 0 0 0 1 0 0 0 0 11 1 1274.6653 A6NHR9;A6NHR9-2;A6NHR9-3 A6NHR9 1620 1630 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes no 3 4.2915E-05 80.834 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 3806700 521640 345290 573120 0 989690 1376900 5948 23 6037 26427;26428;26429;26430;26431 17431;17432;17433;17434 17433 4 QQQQQQQQQQQQQQQQQQHVTSWPGKQVETLR SEETSNQKQQQQQQQQ GKQVETLRLWEEAVKA K Q Q L R L 0 1 0 0 0 19 1 1 1 0 1 1 0 0 1 1 2 1 0 2 0 32 1 3941.9229 Q14119 Q14119 337 368 VEZF1 Vascular endothelial zinc finger 1 yes yes 4 0.0029374 31.252 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 5728700 1488600 1210400 0 0 0 3029600 5949 1094 6038 26432;26433;26434 17435;17436 17436 2 QQQREPAQTEAAASTEPATR LQSRARERQQQREPAQ ASTEPATRRRRRPRRR R Q Q T R R 5 2 0 0 0 4 3 0 0 0 0 0 0 0 2 1 3 0 0 0 0 20 1 2169.041 Q8N8A6 Q8N8A6 46 65 DDX51 ATP-dependent RNA helicase DDX51 yes yes 3 0.0037865 46.953 By matching By matching By matching By matching By matching By MS/MS 1 1 3391800 0 0 0 0 2042200 1349600 5950 1308 6039 26435;26436 17437 17437 1 QQSAQSQVSTTAENK LKLIQQLRQQSAQSQV VSTTAENKTTTTARLA R Q Q N K T 2 0 1 0 0 4 1 0 0 0 0 1 0 0 0 3 2 0 0 1 0 15 0 1605.7594 Q9H0A0;E7ESU4;E9PMN9 Q9H0A0 433 447 NAT10 N-acetyltransferase 10 yes no 2 0.0012219 69.331 By matching By matching By matching By matching By matching By MS/MS 1 1 984200 0 222370 0 0 0 761830 5951 1477 6040 26437;26438 17438;17439 17438 2 QQSHFAMMHGGTGFAGIDSSSPEVK AKLNQVARQQSHFAMM DSSSPEVKGYWASLDA R Q Q V K G 2 0 0 1 0 2 1 4 2 1 0 1 2 2 1 4 1 0 0 1 0 25 0 2605.169 Q15365 Q15365 244 268 PCBP1 Poly(rC)-binding protein 1 yes yes 4 9.1871E-16 79.589 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 2 138510000 0 33121000 0 15026000 0 90368000 5952 1135 6041;6042 26439;26440;26441;26442 17440;17441;17442;17443;17444 17441 143 5 QQTDIAVNWAGGLHHAK ASAVKLNKQQTDIAVN AGGLHHAKKSEASGFC K Q Q A K K 3 0 1 1 0 2 0 2 2 1 1 1 0 0 0 0 1 1 0 1 0 17 0 1844.9282 Q13547;Q5TEE2 Q13547 127 143 HDAC1 Histone deacetylase 1 yes no 3;4 3.4651E-08 93.716 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 12332000 0 2533000 0 0 0 9799200 5953 1086 6043 26443;26444;26445;26446 17445;17446;17447;17448 17447 4 QQTDIAVNWAGGLHHAKK ASAVKLNKQQTDIAVN GGLHHAKKSEASGFCY K Q Q K K S 3 0 1 1 0 2 0 2 2 1 1 2 0 0 0 0 1 1 0 1 0 18 1 1973.0231 Q13547;Q5TEE2 Q13547 127 144 HDAC1 Histone deacetylase 1 yes no 4 0.00088819 57.788 By matching By matching By matching By matching By matching By MS/MS 1 1 2436100 0 0 504660 0 0 1931500 5954 1086 6044 26447;26448 17449 17449 1 QQTDMAVNWAGGLHHAK AGAVKLNRQQTDMAVN AGGLHHAKKSEASGFC R Q Q A K K 3 0 1 1 0 2 0 2 2 0 1 1 1 0 0 0 1 1 0 1 0 17 0 1862.8846 Q92769;H3BM24;B3KRS5 Q92769 128 144 HDAC2 Histone deacetylase 2;Histone deacetylase yes no 3;4 0.0048796 46.324 By matching By matching By MS/MS By matching By matching By MS/MS 1 2 2 1 2 2 22672000 251660 2721900 4468000 736550 2471300 12023000 5955 1358 6045 26449;26450;26451;26452;26453;26454;26455;26456;26457;26458 17450;17451 17450 2 QQTNNQTEVVKIIEK FKKTSIRKQQTNNQTE EVVKIIEKDVMEGVTV K Q Q E K D 0 0 2 0 0 3 2 0 0 2 0 2 0 0 0 0 2 0 0 2 0 15 1 1770.9476 Q5BKZ1;Q5BKZ1-3 Q5BKZ1 373 387 ZNF326 DBIRD complex subunit ZNF326 yes no 3 3.1054E-13 101.2 By matching By matching By matching By matching By matching By MS/MS 1 1 1 12054000 3037800 0 0 0 3981300 5035000 5956 1177 6046 26459;26460;26461 17452 17452 1 QQVAFYGQTLGQAQAHSQEQ MAWAEYYRQQVAFYGQ AQAHSQEQ________ R Q Q E Q - 3 0 0 0 0 7 1 2 1 0 1 0 0 1 0 1 1 0 1 1 0 20 0 2218.0403 Q96I24;Q96I24-2 Q96I24 553 572 FUBP3 Far upstream element-binding protein 3 yes no 2 0.0062105 73.448 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 3168300 0 3168300 0 0 0 0 5957 1394 6047 26462;26463 17453;17454 17453 2 QQVENRVVEEAK PFLSAFERQQVENRVV NRVVEEAKGLLDKVKD R Q Q A K G 1 1 1 0 0 2 3 0 0 0 0 1 0 0 0 0 0 0 0 3 0 12 1 1427.7369 O96006 O96006 491 502 ZBED1 Zinc finger BED domain-containing protein 1 yes yes 3 0.0041764 65.842 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 11587000 998700 3976300 2050600 358890 912150 3290300 5958 778 6048 26464;26465;26466;26467;26468;26469 17455;17456 17456 2 QQVSGWTPAHVRK KEKKTDAKQQVSGWTP WTPAHVRKQLAIGVNE K Q Q R K Q 1 1 0 0 0 2 0 1 1 0 0 1 0 0 1 1 1 1 0 2 0 13 1 1492.7899 Q5VUC9;Q5VUC3;P78345 Q5VUC9 99 111 RPP38 Ribonuclease P protein subunit p38 yes no 3 0.00058185 77.185 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 11323000 0 926390 3544900 1413800 2750800 2686800 5959 1009 6049 26470;26471;26472;26473;26474 17457;17458;17459;17460 17460 4 QQVVLENAAKK AEQAISVRQQVVLENA VLENAAKKRERATSDP R Q Q K K R 2 0 1 0 0 2 1 0 0 0 1 2 0 0 0 0 0 0 0 2 0 11 1 1226.6983 Q01780;Q01780-2 Q01780 769 779 EXOSC10 Exosome component 10 yes no 3 7.1115E-152 169.99 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 2 1 4270800 0 0 859550 352130 992430 2066700 5960 1030 6050 26475;26476;26477;26478;26479 17461;17462;17463 17462 3 QQYLQSIEER KDESQEGKQQYLQSIE YLQSIEEREKLDGLYE K Q Q E R E 0 1 0 0 0 3 2 0 0 1 1 0 0 0 0 1 0 0 1 0 0 10 0 1292.6361 P21912 P21912 168 177 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 2 0.0027003 99.283 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 11363000 1043900 3439700 1205100 868570 0 4806200 5961 861 6051 26480;26481;26482;26483;26484 17464 17464 1 QRGWEEDEDPERK IVKKLESRQRGWEEDE EDEDPERKGAIVFNAT R Q R R K G 0 2 0 2 0 1 4 1 0 0 0 1 0 0 1 0 0 1 0 0 0 13 2 1672.7441 O43290;G3V1T2 O43290 536 548 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 3 0.010469 63.727 By matching By matching By matching By matching By matching By MS/MS 1 1 1229300 0 0 0 0 429840 799440 5962 713 6052 26485;26486 17465 17465 1 QRIQPQMDMVEK DWVVFYARQRIQPQMD PQMDMVEKESGDREAL R Q R E K E 0 1 0 1 0 3 1 0 0 1 0 1 2 0 1 0 0 0 0 1 0 12 1 1501.7381 Q9HA64;F5H4E4 Q9HA64 171 182 FN3KRP Ketosamine-3-kinase yes no 3 0.0018583 77.124 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2944400 0 1460400 0 411880 0 1072100 5963 1511 6053 26487;26488;26489 17466 17466 1 QRLQAFGLNPK LGGCEFSRQRLQAFGL QAFGLNPKRLHFRQLG R Q R P K R 1 1 1 0 0 2 0 1 0 0 2 1 0 1 1 0 0 0 0 0 0 11 1 1270.7146 Q8N9T8;D3YTE0;Q8N9T8-2 Q8N9T8 678 688 KRI1 Protein KRI1 homolog yes no 3 2.3258E-05 104.05 By matching By matching By matching By matching By matching By MS/MS 1 1 2046500 0 604150 0 0 0 1442400 5964 1312 6054 26490;26491 17467 17467 1 QRQEEPPPGPQRPDQSAAAAGPGDPK RKMEEEQRQRQEEPPP AAGPGDPKRKGGPGST R Q R P K R 4 2 0 2 0 4 2 3 0 0 0 1 0 0 7 1 0 0 0 0 0 26 2 2680.2954 Q9BQ61 Q9BQ61 79 104 C19orf43 Uncharacterized protein C19orf43 yes yes 4 2.5542E-16 81.696 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 8065300 0 2103000 0 726700 2022700 3212900 5965 1437 6055 26492;26493;26494;26495 17468;17469 17468 2 QSAERNSNLVGAAHEELQQSR SAKLDNARQSAERNSN HEELQQSRIRIDSLSA R Q S S R I 3 2 2 0 0 3 3 1 1 0 2 0 0 0 0 3 0 0 0 1 0 21 1 2323.1265 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCJ4;Q5TCI8 P02545 276 296 LMNA Prelamin-A/C;Lamin-A/C yes no 3;4 0.00063645 54.511 By MS/MS By MS/MS By matching By matching By matching By MS/MS 2 2 2 1 2 22160000 2099200 8001400 3305000 0 1129600 7624400 5966 783 6056 26496;26497;26498;26499;26500;26501;26502;26503;26504 17470;17471;17472;17473;17474;17475 17475 5 QSEAEVVTEIQLEK RGATVEAKQSEAEVVT VTEIQLEKDQPLVKER K Q S E K D 1 0 0 0 0 2 4 0 0 1 1 1 0 0 0 1 1 0 0 2 0 14 0 1601.8148 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7;Q14676-4 Q14676 247 260 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 2 2.1682E-146 155.37 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 62598000 0 28799000 9361200 7235200 6096700 11106000 5967 1109 6057 26505;26506;26507;26508;26509 17476;17477;17478;17479;17480 17479 5 QSEENNNLQSQVQK NLREKVMKQSEENNNL NLQSQVQKLTEENTTL K Q S Q K L 0 0 3 0 0 4 2 0 0 0 1 1 0 0 0 2 0 0 0 1 0 14 0 1644.7703 Q86TG7-2;Q86TG7 Q86TG7-2 23 36 PEG10 Retrotransposon-derived protein PEG10 yes no 2 0.0040399 58.32 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 4259300 0 0 1703800 344680 410400 1800400 5968 1258 6058 26510;26511;26512;26513 17481;17482 17481 2 QSGEAFVELGSEDDVK FIYTREGRQSGEAFVE LGSEDDVKMALKKDRE R Q S V K M 1 0 0 2 0 1 3 2 0 0 1 1 0 1 0 2 0 0 0 2 0 16 0 1708.7792 P52597 P52597 53 68 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes yes 2 0 235.78 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 26046000 0 22071000 0 3975400 0 0 5969 958 6059 26514;26515 17483;17484 17484 2 QSGSRGGSGGGGSISGGGYGSGGGSGGR SSYGSGGRQSGSRGGS SGGGSGGRYGSGGGSK R Q S G R Y 0 2 0 0 0 1 0 16 0 1 0 0 0 0 0 7 0 0 1 0 0 28 1 2255.9864 P35908;CON__P35908 P35908 545 572 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 0.0083603 33.317 By matching By matching By matching By matching By matching By MS/MS 1 547850 0 0 0 0 0 547850 + 5970 302 6060 26516 17485 17485 1 QSGSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSK SSYGSGGRQSGSRGGS YGSGGGSKGGSISGGG R Q S S K G 0 2 0 0 0 1 0 20 0 1 0 1 0 0 0 9 0 0 2 0 0 36 2 2949.2946 P35908;CON__P35908 P35908 545 580 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 4 1.4001E-10 44.815 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 9855600 0 0 4642200 1982600 995980 2234800 + 5971 302 6061 26517;26518;26519;26520 17486;17487 17487 2 QSHEPVPDTSVEK VKASSPIKQSHEPVPD VPDTSVEKGFPASTEA K Q S E K G 0 0 0 1 0 1 2 0 1 0 0 1 0 0 2 2 1 0 0 2 0 13 0 1451.6892 Q9ULM3 Q9ULM3 371 383 YEATS2 YEATS domain-containing protein 2 yes yes 3 0.0013734 87.083 By matching By matching By matching By matching By matching By MS/MS 1 1 1208900 0 442160 0 0 0 766720 5972 1609 6062 26521;26522 17488 17488 1 QSLKNADLCIASGTK ISKPSKKKQSLKNADL LCIASGTKVALFNRLR K Q S T K V 2 0 1 1 1 1 0 1 0 1 2 2 0 0 0 2 1 0 0 0 0 15 1 1604.8192 Q06330;D6R927;Q06330-5;Q06330-4;Q06330-6;Q06330-7;Q06330-3;Q06330-2;D6RBQ8;D6RA45;D6RCM1 Q06330 172 186 RBPJ Recombining binding protein suppressor of hairless yes no 3 0.012919 45.883 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 16693000 3463800 2556700 2420400 2715700 2446700 3089900 5973 1042 6063 26523;26524;26525;26526;26527;26528 17489 17489 1 QSLNCLTK QLAHGYVKQSLNCLTK QSLNCLTKRSITFLCG K Q S T K R 0 0 1 0 1 1 0 0 0 0 2 1 0 0 0 1 1 0 0 0 0 8 0 962.48552 E9PHS0;O43813 E9PHS0 94 101 LANCL1 LanC-like protein 1 yes no 2 0.0081354 93.649 By matching By MS/MS By matching By matching By matching By matching 1 1353200 0 1353200 0 0 0 0 5974 441 6064 26529 17490 17490 1 QSNASSDVEVEEK SSQQAATKQSNASSDV SDVEVEEKETSVSKED K Q S E K E 1 0 1 1 0 1 3 0 0 0 0 1 0 0 0 3 0 0 0 2 0 13 0 1420.6318 O75475;O75475-2 O75475 101 113 PSIP1 PC4 and SFRS1-interacting protein yes no 2 6.1638E-24 114.7 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 62122000 4215400 8871600 16887000 3415400 6362400 22371000 5975 741 6065 26530;26531;26532;26533;26534;26535 17491;17492;17493 17493 3 QSPGSTSPKPPHTLSRK STTNDPPKQSPGSTSP PPHTLSRKQWRNRQKN K Q S R K Q 0 1 0 0 0 1 0 1 1 0 1 2 0 0 4 4 2 0 0 0 0 17 2 1803.9591 E9PPY3;O43159 E9PPY3 170 186 RRP8 Ribosomal RNA-processing protein 8 yes no 4 0.023842 50.04 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 3416200 0 712270 558010 210440 0 1935500 5976 462 6066 26536;26537;26538;26539 17494 17494 0 QSPQTSFPYK SPLPLISKQSPQTSFP PQTSFPYKIMPIQHTL K Q S Y K I 0 0 0 0 0 2 0 0 0 0 0 1 0 1 2 2 1 0 1 0 0 10 0 1181.5717 Q8IWC1-2;Q8IWC1;H7BY77;Q8IWC1-3 Q8IWC1-2 491 500 MAP7D3 MAP7 domain-containing protein 3 yes no 2 1.2281E-23 126.03 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 15394000 0 2524800 2634800 1273900 2854600 6105700 5977 1280 6067 26540;26541;26542;26543;26544 17495;17496 17495 2 QSQESRMPETVPQEEMPGPPLNSESGEEAPTGRDK GSTKKRKKQSQESRMP EAPTGRDKKRKQQQQQ K Q S D K K 1 2 1 1 0 3 7 3 0 0 1 1 2 0 6 4 2 0 0 1 0 35 2 3823.7265 O15446;O15446-2 O15446 466 500 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes no 4 0.00012319 31.224 By matching By matching By matching By matching By matching By MS/MS 1 3276500 0 0 0 0 0 3276500 5978 706 6068 26545 17497 17497 1 QSQETEARPSIMK LDYRDITKQSQETEAR EARPSIMKRDDSNNKT K Q S M K R 1 1 0 0 0 2 2 0 0 1 0 1 1 0 1 2 1 0 0 0 0 13 1 1503.7351 Q14966-3;Q14966;Q14966-5;F5H6M8;E7EUZ3 Q14966-3 1489 1501 ZNF638 Zinc finger protein 638 yes no 3 8.9966E-06 99.732 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 13803000 1473900 2161200 2791300 1033900 1766800 4576100 5979 1118 6069 26546;26547;26548;26549;26550;26551 17498;17499;17500 17499 3 QSRLDELRGQDEGK LLERLQARQSRLDELR LRGQDEGKAQELEAKM R Q S G K A 0 2 0 2 0 2 2 2 0 0 2 1 0 0 0 1 0 0 0 0 0 14 2 1629.8071 O75683 O75683 247 260 SURF6 Surfeit locus protein 6 yes yes 3 0.0054221 67.519 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 4332900 0 0 0 767320 1083400 2482200 5980 749 6070 26552;26553;26554 17501;17502 17502 1 QSSLASASFLPK AEDPKRNKQSSLASAS ASASFLPKYFSSKWSF K Q S P K Y 2 0 0 0 0 1 0 0 0 0 2 1 0 1 1 4 0 0 0 0 0 12 0 1234.6558 I3L3A5;B4DMI6;Q5MNZ6 I3L3A5 47 58 WDR45B;WDR45L WD repeat domain phosphoinositide-interacting protein 3 yes no 2 0.0018734 84.734 By matching By MS/MS By matching By matching By matching By matching 1 8840600 0 8840600 0 0 0 0 5981 105 6071 26555 17503 17503 1 QSSSTNYTNELK KYQAAVSKQSSSTNYT TNYTNELKASGGEIKI K Q S L K A 0 0 2 0 0 1 1 0 0 0 1 1 0 0 0 3 2 0 1 0 0 12 0 1370.6314 F8VQE1;Q9UHB6-2;B4DN52;Q9UHB6;Q9UHB6-4;F8VRN8 F8VQE1 121 132 LIMA1 LIM domain and actin-binding protein 1 yes no 2 0.0026133 73.881 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4412800 0 769390 372910 0 804690 2465800 5982 107 6072 26556;26557;26558;26559 17504;17505 17505 2 QSSSTNYTNELKASGGEIK KYQAAVSKQSSSTNYT KASGGEIKIHKMEQKE K Q S I K I 1 0 2 0 0 1 2 2 0 1 1 2 0 0 0 4 2 0 1 0 0 19 1 2012.9651 F8VQE1;Q9UHB6-2;B4DN52;Q9UHB6;Q9UHB6-4;F8VRN8 F8VQE1 121 139 LIMA1 LIM domain and actin-binding protein 1 yes no 3 0.032267 34.649 By matching By matching By MS/MS By matching By matching By matching 1 1 1 6287000 1540900 2794300 1951800 0 0 0 5983 107 6073 26560;26561;26562 17506 17506 1 QSSVTQVTEQSPK ISASVAVKQSSVTQVT QVTEQSPKVQSRYTKE K Q S P K V 0 0 0 0 0 3 1 0 0 0 0 1 0 0 1 3 2 0 0 2 0 13 0 1417.7049 Q14966-3;Q14966;Q14966-4;Q14966-2;C9JBI6;F5H330;C9JWN0 Q14966-3 118 130 ZNF638 Zinc finger protein 638 yes no 2 0.0019861 83.856 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 12917000 1194400 2510200 2023700 765070 2231100 4192100 5984 1118 6074 26563;26564;26565;26566;26567;26568 17507;17508 17508 2 QSSVTQVTEQSPKVQSR ISASVAVKQSSVTQVT QSPKVQSRYTKESASS K Q S S R Y 0 1 0 0 0 4 1 0 0 0 0 1 0 0 1 4 2 0 0 3 0 17 1 1887.965 Q14966-3;Q14966;Q14966-4;Q14966-2;C9JBI6;F5H330;C9JWN0 Q14966-3 118 134 ZNF638 Zinc finger protein 638 yes no 3 0.010705 42.947 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2 3992000 0 699770 956910 453750 0 1881600 5985 1118 6075 26569;26570;26571;26572;26573 17509 17509 1 QSTDEEVTSLAK MSVNAIRKQSTDEEVT EEVTSLAKSLIKSWKK K Q S A K S 1 0 0 1 0 1 2 0 0 0 1 1 0 0 0 2 2 0 0 1 0 12 0 1306.6252 P23193-2;P23193;E5RIS7;E5RJ93 P23193-2 35 46 TCEA1 Transcription elongation factor A protein 1 yes no 2 0.0038962 67.118 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 4758100 272570 758050 356160 410860 1523800 1436700 5986 864 6076 26574;26575;26576;26577;26578;26579 17510 17510 1 QSVEADINGLRR YENEVALRQSVEADIN ADINGLRRVLDELTLT R Q S R R V 1 2 1 1 0 1 1 1 0 1 1 0 0 0 0 1 0 0 0 1 0 12 1 1356.711 P13645;CON__P13645;CON__P02535-1;CON__P08730-1;Q7Z3Y8;CON__Q7Z3Y8;P13646;CON__P13646-1;P13646-2;C9JA77;P13646-3;CON__ENSEMBL:ENSP00000377550 P13645 246 257 KRT10;KRT27;KRT13 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 27;Keratin, type I cytoskeletal 13 no no 3 0.032886 39.625 By matching By MS/MS By matching By matching By matching By matching 1 1 2918600 0 1492200 1426400 0 0 0 + 5987 298;834 6077 26580;26581 17511 17511 1 QSVLCGSQNIVLNGK ASGNKVSRQSVLCGSQ QNIVLNGKCCILSFTY R Q S G K C 0 0 2 0 1 2 0 2 0 1 2 1 0 0 0 2 0 0 0 2 0 15 0 1615.8352 H3BUD2;H3BS05;H3BQA4;H3BN51;H3BR94;Q9BTE1 H3BUD2 25 39 DCTN5 Dynactin subunit 5 yes no 2 4.8344E-09 100.18 By matching By MS/MS By matching By matching By matching By matching 1 7851000 0 7851000 0 0 0 0 5988 632 6078 26582 17512 17512 1 QTAEETGLTPLETSR FREFEVEKQTAEETGL LTPLETSRKTPDSRPS K Q T S R K 1 1 0 0 0 1 3 1 0 0 2 0 0 0 1 1 4 0 0 0 0 15 0 1631.8002 Q5T8C6;Q7Z651;Q13042-3;Q13042-2;Q13042 Q5T8C6 428 442 CDC16 Cell division cycle protein 16 homolog yes no 2 2.3627E-42 119.65 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 4816300 749720 0 448870 0 1357500 2260300 5989 1068 6079 26583;26584;26585;26586 17513;17514;17515 17513 3 QTALLDADDPVSQLHK LIIRKVDKQTALLDAD DPVSQLHKCAFYLKDT K Q T H K C 2 0 0 3 0 2 0 0 1 0 3 1 0 0 1 1 1 0 0 1 0 16 0 1749.8897 Q06330;D6R927;Q06330-5;Q06330-4;Q06330-6;Q06330-7;Q06330-3;Q06330-2;H0Y8R3 Q06330 270 285 RBPJ Recombining binding protein suppressor of hairless yes no 3 0 203.05 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 129700000 66649000 40160000 0 0 0 22890000 5990 1042 6080 26587;26588;26589 17516;17517;17518 17517 3 QTASIFKQPVTK LNTALPVRQTASIFKQ IFKQPVTKITNHPSNK R Q T T K I 1 0 0 0 0 2 0 0 0 1 0 2 0 1 1 1 2 0 0 1 0 12 1 1346.7558 Q9UBB5;O95983;O95983-2 O95983 103 114 MBD2;MBD3 Methyl-CpG-binding domain protein 2;Methyl-CpG-binding domain protein 3 no no 2;3 0.0018648 83.226 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 3715000 0 1761300 0 0 0 1953600 5991 776;1581 6081 26590;26591 17519;17520 17520 2 QTDVTGEEELTKGK TEKLLPERQTDVTGEE EEELTKGKQDREQKQL R Q T G K Q 0 0 0 1 0 1 3 2 0 0 1 2 0 0 0 0 3 0 0 1 0 14 1 1533.7522 Q14676;Q14676-3;F8VV34;E7EVA7 Q14676 843 856 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3 0.040612 54.094 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1677600 0 0 0 157430 804210 715940 5992 1109 6082 26592;26593;26594 17521 17521 0 QTETEMLYGSAPR ERQLKNKKQTETEMLY MLYGSAPRTPSKRRGL K Q T P R T 1 1 0 0 0 1 2 1 0 0 1 0 1 0 1 1 2 0 1 0 0 13 0 1481.682 H9KV59;O43663;O43663-2;H0YL53;G3V3N7 H9KV59 457 469 PRC1 Protein regulator of cytokinesis 1 no no 2 0.0021953 71.513 By matching By matching By matching By matching By matching By MS/MS 1 1 2285400 0 0 419320 0 0 1866100 5993 676 6083 26595;26596 17522 17522 1 QTETEMLYGSAPRTPSK ERQLKNKKQTETEMLY SAPRTPSKRRGLAPNT K Q T S K R 1 1 0 0 0 1 2 1 0 0 1 1 1 0 2 2 3 0 1 0 0 17 1 1894.9095 H9KV59;O43663;O43663-2;H0YL53;G3V3N7 H9KV59 457 473 PRC1 Protein regulator of cytokinesis 1 no no 3 0.0015833 66.022 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 11973000 979130 1361200 2436800 1222700 2403600 3569500 5994 676 6084 26597;26598;26599;26600;26601;26602 17523;17524;17525 17525 3 QTFPEHCSLCK HISKKMNKQTFPEHCS PEHCSLCKEILPFTDR K Q T C K E 0 0 0 0 2 1 1 0 1 0 1 1 0 1 1 1 1 0 0 0 0 11 0 1405.6119 Q9UKN8 Q9UKN8 741 751 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 3 0.011286 60.691 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2670800 0 0 395080 0 643230 1632500 5995 1602 6085 26603;26604;26605 17526 17526 1 QTIDNSQGAYQEAFDISK VACGDDRKQTIDNSQG QEAFDISKKEMQPTHP K Q T S K K 2 0 1 2 0 3 1 1 0 2 0 1 0 1 0 2 1 0 1 0 0 18 0 2013.928 P27348;B4DMT8 P27348 140 157 YWHAQ 14-3-3 protein theta yes no 2 0.024661 37.285 By matching By MS/MS By matching By matching By matching By matching 1 2291000 0 2291000 0 0 0 0 5996 883 6086 26606 17527 17527 1 QTMLFSATQTR IKLLPTRRQTMLFSAT LFSATQTRKVEDLARI R Q T T R K 1 1 0 0 0 2 0 0 0 0 1 0 1 1 0 1 3 0 0 0 0 11 0 1282.634 Q9NVP1;F5H863;H7C452 Q9NVP1 359 369 DDX18 ATP-dependent RNA helicase DDX18 yes no 2 0.0052347 73.082 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 5605800 364520 0 0 0 3301400 1939800 5997 1550 6087 26607;26608;26609 17528;17529 17529 2 QTMLFSATQTRK IKLLPTRRQTMLFSAT FSATQTRKVEDLARIS R Q T R K V 1 1 0 0 0 2 0 0 0 0 1 1 1 1 0 1 3 0 0 0 0 12 1 1410.7289 Q9NVP1;F5H863;H7C452 Q9NVP1 359 370 DDX18 ATP-dependent RNA helicase DDX18 yes no 2;3 7.7833E-11 107.09 By matching By matching By matching By matching By MS/MS By MS/MS 2 3 2 14044000 0 0 1001700 0 4038200 9003900 5998 1550 6088 26610;26611;26612;26613;26614;26615;26616 17530;17531;17532;17533 17531 3 QTPAPAASVTGSR KALKESAKQTPAPAAS AASVTGSRRRPRAPRE K Q T S R R 3 1 0 0 0 1 0 1 0 0 0 0 0 0 2 2 2 0 0 1 0 13 0 1241.6364 P46013;F5H4V4;P46013-2 P46013 2772 2784 MKI67 Antigen KI-67 no no 2 0.0022329 65.495 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 110020000 17676000 15158000 0 6212500 26507000 44469000 5999 919;920 6089 26617;26618;26619;26620;26621;26622 17534;17535;17536;17537;17538;17539;17540 17534 7 QTPDSGKPLKISR DSFTSAPKQTPDSGKP GKPLKISRRVLRAPKV K Q T S R R 0 1 0 1 0 1 0 1 0 1 1 2 0 0 2 2 1 0 0 0 0 13 2 1425.794 P46013;F5H4V4;P46013-2 P46013 2948 2960 MKI67 Antigen KI-67 no no 3 0.0099573 63.966 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 3066200 560610 666630 1003400 0 0 835520 6000 919;920 6090 26623;26624;26625;26626 17541;17542 17542 2 QTPSRQPPLPHR SGAHPSVRQTPSRQPP RQPPLPHRSRGGGGGS R Q T H R S 0 2 0 0 0 2 0 0 1 0 1 0 0 0 4 1 1 0 0 0 0 12 1 1412.7637 Q07666;Q07666-3 Q07666 32 43 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 3 0.025265 72.152 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 2 1 20030000 0 2785300 3623000 0 4869600 8752400 6001 1045 6091 26627;26628;26629;26630;26631 17543;17544;17545 17544 3 QTRVNPHSLPDPEVNEQSSSK HPGTSRQRQTRVNPHS VNEQSSSKGMFRKKGG R Q T S K G 0 1 2 1 0 2 2 0 1 0 1 1 0 0 3 4 1 0 0 2 0 21 1 2348.1357 Q99575;E5RK39 Q99575 58 78 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 4 0.032351 44.595 By MS/MS By matching By matching By matching By matching By matching 1 1 2038600 1326700 711860 0 0 0 0 6002 1428 6092 26632;26633 17546 17546 0 QTTCWDGVRNYQAR EDLKAQPKQTTCWDGV GVRNYQARNFLRAMKL K Q T A R N 1 2 1 1 1 2 0 1 0 0 0 0 0 0 0 0 2 1 1 1 0 14 1 1753.7955 Q9P016;Q9P016-2 Q9P016 86 99 THYN1 Thymocyte nuclear protein 1 yes no 3 0.0079079 52.79 By matching By matching By matching By matching By matching By MS/MS 1 1 15768000 0 3536600 0 0 0 12232000 6003 1570 6093 26634;26635 17547 17547 1 QTTITSHFAK RITRKSTRQTTITSHF TITSHFAKGPAKRKPQ R Q T A K G 1 0 0 0 0 1 0 0 1 1 0 1 0 1 0 1 3 0 0 0 0 10 0 1132.5877 F5GX68 F5GX68 164 173 DNMT1 Cytosine-specific methyltransferase no no 2 0.0087566 79.201 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2879100 0 544850 0 0 351210 1983000 6004 487 6094 26636;26637;26638 17548 17548 1 QTVAVGVIK RFAVRDMRQTVAVGVI TVAVGVIKAVDKKAAG R Q T I K A 1 0 0 0 0 1 0 1 0 1 0 1 0 0 0 0 1 0 0 3 0 9 0 913.55967 Q5VTE0;P68104;Q6IQ15;Q05639 Q5VTE0 431 439 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2 0.019216 70.256 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 112480000 8381900 14063000 6238000 6639600 24847000 52306000 6005 1006 6095 26639;26640;26641;26642;26643;26644 17549;17550;17551;17552 17550 4 QTVAVGVIKAVDK RFAVRDMRQTVAVGVI GVIKAVDKKAAGAGKV R Q T D K K 2 0 0 1 0 1 0 1 0 1 0 2 0 0 0 0 1 0 0 4 0 13 1 1326.7871 Q5VTE0;P68104;Q6IQ15 Q5VTE0 431 443 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 2;3 1.8324E-24 118.52 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 1 2 504490000 95677000 101670000 95642000 59165000 3631600 148710000 6006 1006 6096 26645;26646;26647;26648;26649;26650;26651;26652;26653;26654;26655 17553;17554;17555;17556;17557;17558;17559;17560;17561 17553 9 QTVAVGVIKAVDKK RFAVRDMRQTVAVGVI VIKAVDKKAAGAGKVT R Q T K K A 2 0 0 1 0 1 0 1 0 1 0 3 0 0 0 0 1 0 0 4 0 14 2 1454.8821 Q5VTE0;P68104;Q6IQ15 Q5VTE0 431 444 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 2;3 6.5624E-19 110.44 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 33409000 879620 0 3464800 9924300 4943600 14197000 6007 1006 6097 26656;26657;26658;26659;26660 17562;17563;17564 17564 3 QTYSTEPNNLKAR SFLIKRNKQTYSTEPN EPNNLKARNSFRYNGL K Q T A R N 1 1 2 0 0 1 1 0 0 0 1 1 0 0 1 1 2 0 1 0 0 13 1 1520.7583 P46779;C9JB50;G5E9L2;H0YLP6;H0YMF4;P46779-2;E9PB24;H0YKD8 P46779 23 35 RPL28 60S ribosomal protein L28 yes no 3 0.0022764 66.023 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 7657700 1507700 917050 1000600 2094100 0 2138300 6008 926 6098 26661;26662;26663;26664;26665 17565;17566;17567 17566 3 QVAASPAVGQPLQKEPSLHLDTPSK AVVSQHARQVAASPAV LHLDTPSKFLSKDKLF R Q V S K F 3 0 0 1 0 3 1 1 1 0 3 2 0 0 4 3 1 0 0 2 0 25 1 2597.3813 Q92547 Q92547 801 825 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 4 2.076E-38 95.51 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 62310000 9079600 16928000 0 10454000 0 25848000 6009 1351 6099 26666;26667;26668;26669 17568;17569;17570 17568 3 QVCGDSIKPEETEQEVAADETR AKDGPPKKQVCGDSIK EVAADETRNLPHSKQG K Q V T R N 2 1 0 2 1 2 5 1 0 1 0 1 0 0 1 1 2 0 0 2 0 22 1 2490.118 Q96GM8;B4DEM6 Q96GM8 369 390 TOE1 Target of EGR1 protein 1 yes no 3 0.0035201 47.155 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 4260900 0 1643200 1252500 0 0 1365200 6010 1389 6100 26670;26671;26672 17571;17572;17573 17573 3 QVDESGTKVDEYGAK AVPSAAGKQVDESGTK KVDEYGAKDYRLQMPL K Q V A K D 1 0 0 2 0 1 2 2 0 0 0 2 0 0 0 1 1 0 1 2 0 15 1 1624.758 P19447 P19447 45 59 ERCC3 TFIIH basal transcription factor complex helicase XPB subunit yes yes 3 0.03914 38.199 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1911500 0 0 424500 0 432130 1054900 6011 856 6101 26673;26674;26675 17574 17574 1 QVETEEAGVVTTATASVNLK GRKRKAEKQVETEEAG ATASVNLKVSPKRGRP K Q V L K V 3 0 1 0 0 1 3 1 0 0 1 1 0 0 0 1 4 0 0 4 0 20 0 2046.0481 O75475;O75475-2 O75475 156 175 PSIP1 PC4 and SFRS1-interacting protein yes no 2 0 212.26 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 52649000 42581000 10068000 0 0 0 0 6012 741 6102 26676;26677 17575;17576 17576 2 QVEVLAENIQDTK TSVLRYKKQVEVLAEN AENIQDTKSQPNTMTS K Q V T K S 1 0 1 1 0 2 2 0 0 1 1 1 0 0 0 0 1 0 0 2 0 13 0 1485.7675 Q96QE3;Q96QE3-2 Q96QE3 164 176 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 0.037466 53.377 By matching By matching By matching By matching By matching By MS/MS 1 1 1724300 0 792810 0 0 0 931450 6013 1415 6103 26678;26679 17577 17577 0 QVGVGYVDSIQR MSAVDGQRQVGVGYVD GYVDSIQRKLGLCEFP R Q V Q R K 0 1 0 1 0 2 0 2 0 1 0 0 0 0 0 1 0 0 1 3 0 12 0 1319.6834 B4E2Z2;P43246;E9PHA6;E7EU21;E7EQQ1;C9J809 B4E2Z2 94 105 MSH2 DNA mismatch repair protein Msh2 yes no 2 0.022435 50.897 By matching By MS/MS By matching By matching By matching By matching 1 1 4121200 0 2203400 0 0 0 1917800 6014 162 6104 26680;26681 17578 17578 1 QVGVGYVDSIQRK MSAVDGQRQVGVGYVD YVDSIQRKLGLCEFPD R Q V R K L 0 1 0 1 0 2 0 2 0 1 0 1 0 0 0 1 0 0 1 3 0 13 1 1447.7783 B4E2Z2;P43246;E9PHA6;E7EU21;E7EQQ1;C9J809 B4E2Z2 94 106 MSH2 DNA mismatch repair protein Msh2 yes no 2;3 0.0011554 66.538 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 1 2 86780000 922280 12900000 7533800 7530600 8108900 49784000 6015 162 6105 26682;26683;26684;26685;26686;26687;26688;26689;26690 17579;17580;17581;17582;17583;17584;17585;17586 17585 7 QVIAGVGALEQEHAQYK QETYKTLKQVIAGVGA EQEHAQYKRDKFKKTK K Q V Y K R 3 0 0 0 0 3 2 2 1 1 1 1 0 0 0 0 0 0 1 2 0 17 0 1839.9479 F8W6X8;Q14644 F8W6X8 750 766 RASA3 Ras GTPase-activating protein 3 yes no 3 0.0014677 68.978 By matching By matching By matching By matching By matching By MS/MS 1 1590500 0 0 0 0 0 1590500 6016 556 6106 26691 17587;17588 17588 2 QVISTGIQPHGETAAK ENRELASKQVISTGIQ PHGETAAKCNGDVIRG K Q V A K C 2 0 0 0 0 2 1 2 1 2 0 1 0 0 1 1 2 0 0 1 0 16 0 1635.858 Q15776 Q15776 273 288 ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 yes yes 3 0.022073 39.517 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3184600 0 0 444480 0 840850 1899300 6017 1147 6107 26692;26693;26694 17589 17589 1 QVISTSSDAESR KGVITLDKQVISTSSD TSSDAESREEVPMCSD K Q V S R E 1 1 0 1 0 1 1 0 0 1 0 0 0 0 0 4 1 0 0 1 0 12 0 1278.6052 F2Z2E1;Q96EK7;F5GZX9;F5GY05;Q96EK7-2 F2Z2E1 327 338 FAM120B Constitutive coactivator of peroxisome proliferator-activated receptor gamma yes no 2 0.01106 58.098 By matching By matching By matching By matching By matching By MS/MS 1 1 1751100 0 589160 0 0 0 1162000 6018 474 6108 26695;26696 17590 17590 1 QVLLSAAEAAEVILRVDNIIK TESFQVKRQVLLSAAE LRVDNIIKAAPRKRVP R Q V I K A 4 1 1 1 0 1 2 0 0 3 3 1 0 0 0 1 0 0 0 3 0 21 1 2264.3104 P78371-2;P78371 P78371-2 455 475 CCT2 T-complex protein 1 subunit beta yes no 3 2.1323E-06 65.287 By matching By MS/MS By matching By matching By matching By matching 1 390630000 0 390630000 0 0 0 0 6019 1010 6109 26697 17591 17591 1 QVLQVAHLVK Q V V K 1 0 0 0 0 2 0 0 1 0 2 1 0 0 0 0 0 0 0 3 0 10 0 1133.6921 REV__P29144 yes no 2 0.004649 87.639 By matching By MS/MS By MS/MS By matching By matching By matching 2 2 1 18338000 0 6775300 9486400 2076400 0 0 + 6020 1675 6110 26698;26699;26700;26701;26702 17592;17593 17593 2 QVLSGSGESVTK EKKKDLAKQVLSGSGE GSGESVTKLTLADLRV K Q V T K L 0 0 0 0 0 1 1 2 0 0 1 1 0 0 0 3 1 0 0 2 0 12 0 1190.6143 Q9UNY4 Q9UNY4 1139 1150 TTF2 Transcription termination factor 2 yes yes 2 0.029819 47.606 By matching By matching By matching By matching By matching By MS/MS 1 1 1 6688100 0 0 2049500 0 1552100 3086600 6021 1618 6111 26703;26704;26705 17594 17594 1 QVLVAPGNAGTACSEK LAQSHHVKQVLVAPGN AGTACSEKISNTAISI K Q V E K I 3 0 1 0 1 1 1 2 0 0 1 1 0 0 1 1 1 0 0 2 0 16 0 1600.7879 C9JBJ1;C9JTV6;F8WD69;P22102-2;P22102;C9JZG2;C9JKQ7 C9JBJ1 29 44 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 2 0.0015194 78.326 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 33841000 3092700 6037900 5950300 3918400 5748200 9093800 6022 239 6112 26706;26707;26708;26709;26710;26711 17595;17596;17597;17598;17599;17600;17601 17597 7 QVNYNDGSQEDR GKGKRIRKQVNYNDGS NDGSQEDRDWQDDQSD K Q V D R D 0 1 2 2 0 2 1 1 0 0 0 0 0 0 0 1 0 0 1 1 0 12 0 1423.5964 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1316 1327 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 0.0034305 70.089 By matching By matching By matching By matching By matching By MS/MS 1 513670 0 0 0 0 0 513670 6023 486 6113 26712 17602 17602 1 QVSSHIQVLARK TGKTRTRKQVSSHIQV HIQVLARKKVREYQVG K Q V R K K 1 1 0 0 0 2 0 0 1 1 1 1 0 0 0 2 0 0 0 2 0 12 1 1364.7888 Q99594 Q99594 89 100 TEAD3 Transcriptional enhancer factor TEF-5 yes yes 3 0.0043096 60.691 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 23642000 2130200 1773900 2577100 1789500 6649700 8722100 6024 1429 6114 26713;26714;26715;26716;26717;26718 17603;17604;17605;17606;17607;17608;17609 17605 7 QVSSHLQVLAR TGKTRTRKQVSSHLQV SHLQVLARRKSREIQS K Q V A R R 1 1 0 0 0 2 0 0 1 0 2 0 0 0 0 2 0 0 0 2 0 11 0 1236.6939 H0Y3A6 H0Y3A6 105 115 yes yes 2;3 0.0021191 87.568 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 1 2 1 1 63104000 8330500 4582800 3264500 4724600 14665000 27536000 6025 606 6115 26719;26720;26721;26722;26723;26724;26725;26726;26727 17610;17611;17612;17613;17614;17615;17616;17617 17611 8 QWGWTQGRWPK VGRCAQAKQWGWTQGR WTQGRWPKKSAEFLLH K Q W P K K 0 1 0 0 0 2 0 2 0 0 0 1 0 0 1 0 1 3 0 0 0 11 1 1428.7051 P18621;B4E3C2 P18621 75 85 RPL17 60S ribosomal protein L17 yes no 3 0.012541 62.166 By matching By matching By matching By MS/MS By matching By matching 1 5103000 0 0 0 5103000 0 0 6026 855 6116 26728 17618 17618 1 QYADVEGF YLLQNSVKQYADVEGF QYADVEGF________ K Q Y G F - 1 0 0 1 0 1 1 1 0 0 0 0 0 1 0 0 0 0 1 1 0 8 0 927.39741 P61978-3;P61978-2;B4DFF1 P61978-3 433 440 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 1 2.9646E-142 175.75 By matching By matching By matching By matching By matching By MS/MS 1 6124200 0 0 0 0 0 6124200 6027 984 6117 26729 17619 17619 1 QYDEALNKQDWVDGEPTEAEK SDYSEAAKQYDEALNK GEPTEAEKDFWELASL K Q Y E K D 2 0 1 3 0 2 4 1 0 0 1 2 0 0 1 0 1 1 1 1 0 21 1 2464.103 P78527;E7EUY0;P78527-2 P78527 2971 2991 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 2.6763E-09 85.087 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 9239300 0 2585000 5363700 0 1290600 0 6028 1012 6118 26730;26731;26732 17620;17621 17621 2 QYESLPATHIR HRELFLSRQYESLPAT SLPATHIRGKCSVALL R Q Y I R G 1 1 0 0 0 1 1 0 1 1 1 0 0 0 1 1 1 0 1 0 0 11 0 1313.6728 E7EQY4;Q9BTC8-2;D6W5A2;F8W8M8;E7EV10;Q9BTC8;E9PCS8 E7EQY4 96 106 MTA3 Metastasis-associated protein MTA3 yes no 3 0.016783 55.721 By matching By MS/MS By matching By matching By matching By matching 1 1 4921400 0 1338700 0 0 0 3582700 6029 331 6119 26733;26734 17622 17622 1 QYGAYREQPLPAQDPVSVKEEPEAEVR YTYGASYRQYGAYREQ EEPEAEVRMVNGKPKK R Q Y V R M 3 2 0 1 0 3 5 1 0 0 1 1 0 0 4 1 0 0 2 3 0 27 2 3084.5152 O60479 O60479 94 120 DLX3 Homeobox protein DLX-3 yes yes 4 0.0022549 38.512 By matching By matching By matching By matching By matching By MS/MS 1 3625000 0 0 0 0 0 3625000 6030 730 6120 26735 17623 17623 1 QYRVEVYKNR VKDLLLVRQYRVEVYK RVEVYKNRAGNKASKE R Q Y N R A 0 2 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 2 2 0 10 2 1353.7153 B4E2Z2;P43246;E9PHA6;E7EU21;E7EQQ1;C9J809 B4E2Z2 31 40 MSH2 DNA mismatch repair protein Msh2 yes no 3 0.025218 83.647 By matching By matching By matching By matching By matching By MS/MS 1 1 1622600 0 545870 0 0 0 1076700 6031 162 6121 26736;26737 17624 17624 1 QYSSRDLPSHTK GDLSQLSKQYSSRDLP RDLPSHTKIKYRQTTQ K Q Y T K I 0 1 0 1 0 1 0 0 1 0 1 1 0 0 1 3 1 0 1 0 0 12 1 1417.695 Q9P013 Q9P013 29 40 CWC15 Spliceosome-associated protein CWC15 homolog yes yes 3 0.013906 55.98 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 10602000 1607400 1469700 1948700 988610 1638700 2949100 6032 1569 6122 26738;26739;26740;26741;26742;26743 17625 17625 1 QYYQQPTATAAAVAAAAQPQPSVAETYYQTAPK PAVAYDSKQYYQQPTA TYYQTAPKAGYSQGAT K Q Y P K A 10 0 0 0 0 6 1 0 0 0 0 1 0 0 4 1 4 0 4 2 0 33 0 3483.6947 Q96KR1;B5MEH6 Q96KR1 159 191 ZFR Zinc finger RNA-binding protein yes no 3 1.1272E-52 95.152 By matching By matching By matching By matching By MS/MS By matching 1 34217000 0 0 0 0 34217000 0 6033 1403 6123 26744 17626 17626 1 RAAALEACLDVTKQK AEEEEREKRAAALEAC CLDVTKQKDLSGFYRH K R A Q K D 4 1 0 1 1 1 1 0 0 0 2 2 0 0 0 0 1 0 0 1 0 15 2 1672.893 F5H727;Q9H0G5;H7BYM1 F5H727 95 109 NSRP1 Nuclear speckle splicing regulatory protein 1 yes no 3 1.1669E-69 131.72 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 19148000 2238100 3141900 5022200 2326500 2822300 3597400 6034 526 6124 26745;26746;26747;26748;26749;26750 17627;17628;17629;17630;17631;17632 17631 6 RAAEEEPSTSATVPMSK YINPAATKRAAEEEPS SATVPMSKKKPSRGFG K R A S K K 3 1 0 0 0 0 3 0 0 0 0 1 1 0 2 3 2 0 0 1 0 17 1 1789.8516 Q13356;H7C2D2 Q13356 491 507 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2;Peptidyl-prolyl cis-trans isomerase yes no 3 4.7706E-08 92.096 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 39695000 4310100 6551500 6502800 5438700 6434800 10457000 6035 1079 6125 26751;26752;26753;26754;26755;26756 17633;17634;17635;17636;17637 17634 5 RAAPPPGQSQAQSQGQPVPTAPAR AGMEPARKRAAPPPGQ PVPTAPARSRSAKRRK K R A A R S 5 2 0 0 0 5 0 2 0 0 0 0 0 0 6 2 1 0 0 1 0 24 1 2396.2309 Q6STE5;C9JYI7;Q6STE5-2 Q6STE5 71 94 SMARCD3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 yes no 3 0.03937 25.924 By matching By MS/MS By matching By matching By matching By matching 1 1 754590 0 444580 0 0 310010 0 6036 1234 6126 26757;26758 17638 17638 1 RAASVAAATTSPTPR SVTQRRTRRAASVAAA ATTSPTPRTTRGRRKS R R A P R T 5 2 0 0 0 0 0 0 0 0 0 0 0 0 2 2 3 0 0 1 0 15 1 1455.7794 Q9Y2D9 Q9Y2D9 194 208 ZNF652 Zinc finger protein 652 yes yes 3 9.3585E-09 92.38 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 6037 1631 6127 26759 17639 17639 1 RAATLAQELEK RLKEEASKRAATLAQE TLAQELEKFNRDQKAD K R A E K F 3 1 0 0 0 1 2 0 0 0 2 1 0 0 0 0 1 0 0 0 0 11 1 1228.6776 Q14683;G8JLG1 Q14683 385 395 SMC1A Structural maintenance of chromosomes protein 1A yes no 2 0.017169 82.417 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 6658900 0 1719400 700340 736110 783610 2719400 6038 1110 6128 26760;26761;26762;26763;26764 17640 17640 1 RAAVGQESPGGLEAGNAK KPINKGRKRAAVGQES GLEAGNAKAPKLQDLA K R A A K A 4 1 1 0 0 1 2 4 0 0 1 1 0 0 1 1 0 0 0 1 0 18 1 1710.8649 Q29RF7 Q29RF7 1298 1315 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 3 0.00477 42.633 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2435800 0 0 626860 0 655470 1153500 6039 1159 6129 26765;26766;26767 17641 17641 1 RAAVGQESPGGLEAGNAKAPK KPINKGRKRAAVGQES AGNAKAPKLQDLAKKA K R A P K L 5 1 1 0 0 1 2 4 0 0 1 2 0 0 2 1 0 0 0 1 0 21 2 2007.0498 Q29RF7 Q29RF7 1298 1318 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 3;4 1.1582E-90 125.03 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 1 2 61131000 8526200 9840500 9626500 6124900 8654500 18359000 6040 1159 6130 26768;26769;26770;26771;26772;26773;26774;26775;26776;26777;26778;26779 17642;17643;17644;17645;17646;17647;17648;17649;17650;17651;17652 17646 11 RAAVLLEQERQQEIAK HELLEQQKRAAVLLEQ ERQQEIAKMGTPVPRP K R A A K M 3 2 0 0 0 3 3 0 0 1 2 1 0 0 0 0 0 0 0 1 0 16 2 1881.0432 Q13435;E9PJ04;H0YCG1;E9PJT3 Q13435 183 198 SF3B2 Splicing factor 3B subunit 2 yes no 3 0.00068273 85.163 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 25633000 0 5325700 8014900 3693700 200550 8398400 6041 1083 6131 26780;26781;26782;26783;26784 17653;17654 17654 2 RACAAGTPAVIR ANHQRDARRACAAGTP AGTPAVIRISVATGAL R R A I R I 4 2 0 0 1 0 0 1 0 1 0 0 0 0 1 0 1 0 0 1 0 12 1 1241.6663 A6NEM2;P51610-2;P51610 A6NEM2 1137 1148 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 3 0.0069166 56.205 By matching By matching By matching By matching By matching By MS/MS 1 1 1782500 0 470210 0 0 0 1312300 6042 18 6132 26785;26786 17655 17655 1 RACASPSAQVEGSPVAGSDGSQPAVK PLSLSPSKRACASPSA DGSQPAVKLEPLHFLQ K R A V K L 5 1 0 1 1 2 1 3 0 0 0 1 0 0 3 5 0 0 0 3 0 26 1 2512.1976 Q9UFC0 Q9UFC0 247 272 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 yes yes 3 0.0096838 32.548 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 6152000 0 1302500 1317500 0 946850 2585200 6043 1587 6133 26787;26788;26789;26790 17656;17657 17656 2 RADESHFLIENSTK LETARTGKRADESHFL FLIENSTKEERSLETE K R A T K E 1 1 1 1 0 0 2 0 1 1 1 1 0 1 0 2 1 0 0 0 0 14 1 1645.806 Q92547 Q92547 730 743 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 3 7.4651E-30 113.67 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 17644000 0 3091100 2317500 2156200 3233800 6845500 6044 1351 6134 26791;26792;26793;26794;26795 17658;17659;17660 17660 3 RADESHFLIENSTKEER LETARTGKRADESHFL ENSTKEERSLETEITN K R A E R S 1 2 1 1 0 0 4 0 1 1 1 1 0 1 0 2 1 0 0 0 0 17 2 2059.9923 Q92547 Q92547 730 746 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 3;4 7.8804E-08 92.236 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 2 2 29012000 3160700 3002800 5608100 5369200 5402900 6468100 6045 1351 6135 26796;26797;26798;26799;26800;26801;26802;26803;26804;26805 17661;17662;17663;17664;17665;17666;17667;17668;17669;17670;17671 17671 11 RADLQSTFSGGRIPK QYKKLSAKRADLQSTF FSGGRIPKKFARRGTS K R A P K K 1 2 0 1 0 1 0 2 0 1 1 1 0 1 1 2 1 0 0 0 0 15 2 1631.8744 Q5T670;Q7L590-2;Q7L590 Q5T670 426 440 MCM10 Protein MCM10 homolog yes no 3 0.0019137 73.833 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 5816100 0 1713400 1200600 1022500 1583300 296310 6046 1193 6136 26806;26807;26808;26809;26810 17672;17673;17674;17675 17674 4 RAFLIEEQKIVVK KCVRDRIKRAFLIEEQ EEQKIVVKVLKAQAQS K R A V K V 1 1 0 0 0 1 2 0 0 2 1 2 0 1 0 0 0 0 0 2 0 13 2 1571.9399 P49207 P49207 93 105 RPL34 60S ribosomal protein L34 yes yes 3 0.028198 56.569 By matching By matching By matching By MS/MS By matching By matching 1 2108100 0 0 0 2108100 0 0 6047 933 6137 26811 17676 17676 1 RAFQLEEGEETEPDCK LSLRKAKKRAFQLEEG EETEPDCKYSKKHWKS K R A C K Y 1 1 0 1 1 1 5 1 0 0 1 1 0 1 1 0 1 0 0 0 0 16 1 1936.8473 P38432 P38432 112 127 COIL Coilin yes yes 3 3.8067E-27 110.32 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 50774000 6743700 10236000 9011000 3555900 8312600 12915000 6048 904 6138 26812;26813;26814;26815;26816;26817 17677;17678;17679;17680;17681;17682;17683 17680 7 RAFQLEEGEETEPDCKYSK LSLRKAKKRAFQLEEG EPDCKYSKKHWKSREN K R A S K K 1 1 0 1 1 1 5 1 0 0 1 2 0 1 1 1 1 0 1 0 0 19 2 2315.0376 P38432 P38432 112 130 COIL Coilin yes yes 3;4 9.5819E-10 89.604 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 1 2 62739000 26391000 5752400 15538000 6103000 2022800 6931800 6049 904 6139 26818;26819;26820;26821;26822;26823;26824;26825;26826;26827;26828 17684;17685;17686;17687;17688;17689;17690;17691 17687 8 RAGAVQNTNDSSALSK MGPRSRERRAGAVQNT NDSSALSKRSLAARGR R R A S K R 3 1 2 1 0 1 0 1 0 0 1 1 0 0 0 3 1 0 0 1 0 16 1 1617.8071 H3BU01;O60294 H3BU01 9 24 LCMT2 Leucine carboxyl methyltransferase 2 yes no 3 0.0012968 56.768 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 2810200 402510 405710 659590 341850 389070 611410 6050 650 6140 26829;26830;26831;26832;26833;26834 17692;17693 17692 2 RAGTCCANCQTTTTTLWRR KRRLSAARRAGTCCAN TTTTLWRRNANGDPVC R R A R R N 2 3 1 0 3 1 0 1 0 0 1 0 0 0 0 0 6 1 0 0 0 19 2 2313.0525 P23769 P23769 344 362 GATA2 Endothelial transcription factor GATA-2 yes yes 4 0.039467 32.998 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 8583600 0 1045900 1745000 1016700 1663100 3112900 6051 869 6141 26835;26836;26837;26838;26839 17694 17694 1 RALASFNQEER QIYSADEKRALASFNQ ASFNQEERRKRENKIL K R A E R R 2 2 1 0 0 1 2 0 0 0 1 0 0 1 0 1 0 0 0 0 0 11 1 1319.6582 Q8N5F7;Q5M9Q1 Q8N5F7 380 390 NKAP;NKAPL NF-kappa-B-activating protein;NKAP-like protein yes no 3 0.0010505 89.356 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 10546000 898660 1581100 1444900 576010 1879300 4166100 6052 1303 6142 26840;26841;26842;26843;26844;26845 17695;17696;17697;17698;17699;17700;17701 17700 7 RALASNTSFFSGCSPIEEEAH KAPGKKKKRALASNTS SPIEEEAH________ K R A A H - 3 1 1 0 1 0 3 1 1 1 1 0 0 2 1 4 1 0 0 0 0 21 1 2309.0383 O95239;F5H4Q9;Q2VIQ3 O95239 1212 1232 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 3 2.26E-111 131.31 By matching By matching By matching By MS/MS By matching By matching 1 19014000 0 0 0 19014000 0 0 6053 768 6143 26846 17702 17702 1 RALDFTDSQENEEK FFQKKETKRALDFTDS DSQENEEKASEYRASE K R A E K A 1 1 1 2 0 1 3 0 0 0 1 1 0 1 0 1 1 0 0 0 0 14 1 1680.7591 O94782;C9JWX4;C9JC88 O94782 35 48 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes no 3 5.1539E-08 97.273 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 5648100 223270 1590600 1776500 0 0 2057700 6054 755 6144 26847;26848;26849;26850 17703;17704 17703 2 RALERDPTEDDVESK ACRTRSQKRALERDPT TEDDVESKKIKMERGL K R A S K K 1 2 0 3 0 0 3 0 0 0 1 1 0 0 1 1 1 0 0 1 0 15 2 1758.8384 Q86YP4;B5MC40;Q86YP4-2;C9JHD7;C9JJK9;C9JVY3;C9JMI3;C9JGN4 Q86YP4 13 27 GATAD2A Transcriptional repressor p66-alpha yes no 3;4 7.6621E-21 109.83 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 1 2 123090000 2631400 31977000 40149000 3416300 1038000 43877000 6055 170 6145 26851;26852;26853;26854;26855;26856;26857;26858;26859;26860;26861 17705;17706;17707;17708;17709;17710;17711;17712;17713 17710 9 RALGAHLEAEPK KELNTSSKRALGAHLE AHLEAEPKSQRSAVQK K R A P K S 3 1 0 0 0 0 2 1 1 0 2 1 0 0 1 0 0 0 0 0 0 12 1 1290.7044 Q9NUQ3;Q9NUQ3-2 Q9NUQ3 495 506 TXLNG Gamma-taxilin yes no 3 0.00093377 80.014 By MS/MS By matching By matching By matching By matching By matching 2 9012900 9012900 0 0 0 0 0 6056 1546 6146 26862;26863 17714;17715 17714 2 RALLNLPGTQTSGEAK RRRREKRKRALLNLPG TQTSGEAKDGPPKKQV K R A A K D 2 1 1 0 0 1 1 2 0 0 3 1 0 0 1 1 2 0 0 0 0 16 1 1654.9002 Q96GM8;B4DEM6 Q96GM8 347 362 TOE1 Target of EGR1 protein 1 yes no 3 1.9662E-07 92.952 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 3 141370000 18322000 30358000 39393000 8012600 4128800 41151000 6057 1389 6147 26864;26865;26866;26867;26868;26869;26870;26871;26872 17716;17717;17718;17719;17720;17721;17722;17723 17718 8 RALLNLPGTQTSGEAKDGPPK RRRREKRKRALLNLPG EAKDGPPKKQVCGDSI K R A P K K 2 1 1 1 0 1 1 3 0 0 3 2 0 0 3 1 2 0 0 0 0 21 2 2149.1491 Q96GM8;B4DEM6 Q96GM8 347 367 TOE1 Target of EGR1 protein 1 yes no 3;4 4.5997E-22 96.234 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 2 2 2 30978000 7128300 1459700 10350000 0 6192900 5846900 6058 1389 6148 26873;26874;26875;26876;26877;26878;26879;26880 17724;17725;17726;17727;17728;17729;17730;17731 17726 8 RANPQVGVAFPHIK IVRYAYDKRANPQVGV GVAFPHIKHNYECLVY K R A I K H 2 1 1 0 0 1 0 1 1 1 0 1 0 1 2 0 0 0 0 2 0 14 1 1532.8576 P13010 P13010 400 413 XRCC5 X-ray repair cross-complementing protein 5 yes yes 3 0.00084285 68.171 By matching By matching By matching By matching By matching By MS/MS 2 1518600 0 0 0 0 0 1518600 6059 830 6149 26881;26882 17732;17733 17732 2 RAPASSAPQPKPLK SSSTSSYKRAPASSAP APQPKPLKRFKRAAGK K R A L K R 3 1 0 0 0 1 0 0 0 0 1 2 0 0 4 2 0 0 0 0 0 14 2 1446.8307 E9PE58;Q15345-3;Q15345 E9PE58 354 367 LRRC41 Leucine-rich repeat-containing protein 41 yes no 3 0.010943 59.225 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 7405600 467630 1873600 2625400 287080 0 2151900 6060 424 6150 26883;26884;26885;26886;26887 17734;17735 17734 2 RAPPVRVDEEK ________________ PVRVDEEKRQQLHWNM K R A E K R 1 2 0 1 0 0 2 0 0 0 0 1 0 0 2 0 0 0 0 2 0 11 2 1294.6993 Q149N8-5;F8WEL0;Q149N8-2;Q149N8-4;Q149N8 Q149N8-5 7 17 SHPRH E3 ubiquitin-protein ligase SHPRH yes no 3 0.013028 78.342 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 3281400 311790 646500 1570300 0 0 752820 6061 572 6151 26888;26889;26890;26891 17736 17736 1 RAPSSPVAKPGPVK KAKVPASKRAPSSPVA VAKPGPVKTLTRKKNK K R A V K T 2 1 0 0 0 0 0 1 0 0 0 2 0 0 4 2 0 0 0 2 0 14 2 1389.8092 Q9GZR2;Q9GZR2-2 Q9GZR2 11 24 REXO4 RNA exonuclease 4 yes no 3 0.0034523 76.728 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 2980400 909430 0 255870 0 1204900 610130 6062 1474 6152 26892;26893;26894;26895 17737 17737 1 RAQEYDSSFPNWEFAR QNSEMRMKRAQEYDSS FPNWEFARMIKEFRAT K R A A R M 2 2 1 1 0 1 2 0 0 0 0 0 0 2 1 2 0 1 1 0 0 16 1 2001.8969 B7Z6Q6;Q99661;Q99661-2;Q5JR91;B7Z7M6;Q5JR89 B7Z6Q6 178 193 KIF2C Kinesin-like protein KIF2C yes no 3 1.9355E-16 95.554 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 222980000 0 52757000 109870000 39391000 18659000 2306100 6063 193 6153 26896;26897;26898;26899;26900 17738;17739;17740 17738 2 RAQGGDGVLDATGEEANSNAENPK LRAREIEKRAQGGDGV NSNAENPKLISAMLCA K R A P K L 4 1 3 2 0 1 3 4 0 0 1 1 0 0 1 1 1 0 0 1 0 24 1 2399.0949 H7C109;Q6P158 H7C109 512 535 DHX57 Putative ATP-dependent RNA helicase DHX57 yes no 3 0.0052627 36.923 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 5329200 849980 2169500 654890 538600 0 1116300 6064 665 6154 26901;26902;26903;26904;26905 17741 17741 1 RAQGRGEVGAGAGPGAQAGPSAK KQEARNQKRAQGRGEV AQAGPSAKRAVHLCRG K R A A K R 6 2 0 0 0 2 1 7 0 0 0 1 0 0 2 1 0 0 0 1 0 23 2 2049.0464 E7EM45;C9J8M4;O94966-2;E7EST9;B5MEG5;E7EN22;E7ETS0;E9PEG8 E7EM45 232 254 USP19 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 19 yes no 4 0.0019385 50.232 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 3071800 0 525170 686670 503710 692310 663970 6065 177 6155 26906;26907;26908;26909;26910 17742 17742 1 RAQRPTATYCAVTDGIPAASEGK QKYFTHARRAQRPTAT IPAASEGKIQAALKLE R R A G K I 5 2 0 1 1 1 1 2 0 1 0 1 0 0 2 1 3 0 1 1 0 23 2 2419.1914 C9JM75;H7C454;H7C1H7;Q6P087-2;Q6P087 C9JM75 131 153 RPUSD3 RNA pseudouridylate synthase domain-containing protein 3 yes no 4 0.00024165 56.882 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 11079000 1226500 2474300 2427900 1226400 1076600 2647400 6066 260 6156 26911;26912;26913;26914;26915;26916 17743;17744;17745 17745 3 RARGPEEEEIGSPEPMAAPASASQK LLGPPEAKRARGPEEE APASASQKLSPLQKLS K R A Q K L 5 2 0 0 0 1 5 2 0 1 0 1 1 0 4 3 0 0 0 0 0 25 2 2594.2395 Q14807;B7Z265;H3BRB3 Q14807 401 425 KIF22 Kinesin-like protein KIF22 yes no 3;4 1.1265E-08 62.325 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 1 2 2 2 2 127610000 30060000 15673000 26680000 10001000 14608000 30588000 6067 1115 6157 26917;26918;26919;26920;26921;26922;26923;26924;26925;26926;26927 17746;17747;17748;17749;17750;17751 17748 6 RARPAEVGGMQLR TPAISPSKRARPAEVG EVGGMQLRFARLSEHA K R A L R F 2 3 0 0 0 1 1 2 0 0 1 0 1 0 1 0 0 0 0 1 0 13 2 1439.7779 H0Y477;H0YNJ9;P33316-2 H0Y477 15 27 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial no no 3 0.035818 54.023 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 12000000 0 2567500 2309200 1526600 0 5597000 6068 609 6158 26928;26929;26930;26931 17752 17752 1 RARQPLSEASNQQPLSGGEEK PRSMTHAKRARQPLSE PLSGGEEKSCTKPSPS K R A E K S 2 2 1 0 0 3 3 2 0 0 2 1 0 0 2 3 0 0 0 0 0 21 2 2281.1411 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 39 59 ANLN Actin-binding protein anillin yes no 3;4 6.8972E-05 61.757 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 2 98371000 11097000 18295000 22420000 12974000 12618000 20967000 6069 1533 6159 26932;26933;26934;26935;26936;26937;26938;26939;26940;26941;26942 17753;17754;17755;17756;17757 17754 5 RASNLLYGQLK RALLPELRRASNLLYG NLLYGQLKFGTLDCTV R R A L K F 1 1 1 0 0 1 0 1 0 0 3 1 0 0 0 1 0 0 1 0 0 11 1 1261.7143 Q8IXB1;Q8IXB1-2;F8W884 Q8IXB1 492 502 DNAJC10 DnaJ homolog subfamily C member 10 yes no 2 0.026759 72.289 By MS/MS By matching By matching By matching By matching By matching 1 1253600 1253600 0 0 0 0 0 6070 1287 6160 26943 17758 17758 1 RASQGLLSSIENSESDSSEAK GRTRYQTRRASQGLLS ESDSSEAKEEGSRKKR R R A A K E 2 1 1 1 0 1 3 1 0 1 2 1 0 0 0 7 0 0 0 0 0 21 1 2194.0349 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1540 1560 RIF1 Telomere-associated protein RIF1 yes no 3 3.9035E-15 91.337 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 17368000 8160100 2375800 0 0 0 6832200 6071 1201 6161 26944;26945;26946 17759;17760;17761;17762;17763;17764 17763 6 RATIQFHQPQRFK LRKDFDQKRATIQFHQ FHQPQRFKDELWRIQE K R A F K D 1 2 0 0 0 3 0 0 1 1 0 1 0 2 1 0 1 0 0 0 0 13 2 1655.9008 Q8IUF8-4;Q8IUF8;Q8IUF8-2 Q8IUF8-4 132 144 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA yes no 4 0.0011913 78.705 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 16268000 0 483280 1651300 1943700 5345100 6844400 6072 1275 6162 26947;26948;26949;26950;26951 17765;17766;17767;17768;17769;17770 17769 6 RAVGPSSTQLYMVR GFDIKVPRRAVGPSST STQLYMVRTMLESLIA R R A V R T 1 2 0 0 0 1 0 1 0 0 1 0 1 0 1 2 1 0 1 2 0 14 1 1563.8191 Q7L576;E7EQ04;E7EVJ5;Q96F07-2;E7EVF4;F5H583;E7EW33 Q7L576 550 563 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 3 0.010896 44.807 By matching By matching By matching By matching By matching By MS/MS 1 1 5576500 0 0 0 0 1601800 3974700 6073 359 6163 26952;26953 17771 17771 1 RAYDIAGSTKDVK DIVALMVRRAYDIAGS AGSTKDVKVFLNGNKL R R A V K V 2 1 0 2 0 0 0 1 0 1 0 2 0 0 0 1 1 0 1 1 0 13 2 1422.7467 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5 P11388 242 254 TOP2A DNA topoisomerase 2-alpha yes no 3 0.0332 54.898 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 7575000 0 985410 594730 0 1490200 4504800 6074 655 6164 26954;26955;26956;26957 17772;17773 17773 2 RAYDLAGSCRGVK DIVALMTRRAYDLAGS AGSCRGVKVMFNGKKL R R A V K V 2 2 0 1 1 0 0 2 0 0 1 1 0 0 0 1 0 0 1 1 0 13 2 1451.7303 Q02880-2;Q02880;E9PCY5 Q02880-2 258 270 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 3 0.0047708 81.789 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 10379000 924740 3423200 3013100 1259700 1758100 0 6075 1035 6165 26958;26959;26960;26961;26962;26963 17774;17775;17776 17774 3 RAYETMAGAGVPFSANGRPLASGIR GLGGIMVKRAYETMAG RPLASGIRSSSQPAAK K R A I R S 5 3 1 0 0 0 1 4 0 1 1 0 1 1 2 2 1 0 1 1 0 25 2 2548.2969 O94776;Q68DB1 O94776 560 584 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 3;4 4.9624E-39 99.569 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 3 2 440920000 0 39023000 175790000 0 0 226100000 6076 754 6166;6167 26964;26965;26966;26967;26968;26969;26970 17777;17778;17779;17780;17781;17782;17783;17784;17785 17782 76 9 RCATPVIIDEILPSK HHVKMKAKRCATPVII IDEILPSKKMKVSNNK K R C S K K 1 1 0 1 1 0 1 0 0 3 1 1 0 0 2 1 1 0 0 1 0 15 1 1710.9338 Q9ULW0;Q96RR5 Q9ULW0 144 158 TPX2;HCA90 Targeting protein for Xklp2 yes no 3 0.00033771 70.783 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 259770000 6968200 0 0 0 252800000 0 6077 1611 6168 26971;26972 17786;17787 17786 2 RCGKPPCEVDSPSFPCTHCGK MGYQYHQRRCGKPPCE FPCTHCGKTYRSKAGH R R C G K T 0 1 0 1 4 0 1 2 1 0 0 2 0 1 4 2 1 0 0 1 0 21 2 2475.0552 Q96KM6 Q96KM6 617 637 ZNF512B Zinc finger protein 512B yes yes 4 0.021437 35.023 By MS/MS By matching By matching By matching By matching By matching 1 1 1 3537700 1990800 0 1115000 431900 0 0 6078 1402 6169 26973;26974;26975 17788 17788 1 RCLYASVLTAQPR GQIIPTARRCLYASVL SVLTAQPRLMEPIYLV R R C P R L 2 2 0 0 1 1 0 0 0 0 2 0 0 0 1 1 1 0 1 1 0 13 1 1533.8086 P13639;B4DPU3 P13639 727 739 EEF2 Elongation factor 2 yes no 3 0.038183 35.657 By matching By MS/MS By matching By matching By matching By matching 1 1 701940 0 552830 0 0 0 149100 6079 833 6170 26976;26977 17789 17789 1 RCSDNTEVEVSNLENKQPVESTSAK TKPSPSKKRCSDNTEV PVESTSAKSCSPSPVS K R C A K S 1 1 3 1 1 1 4 0 0 0 1 2 0 0 1 4 2 0 0 3 0 25 2 2820.3196 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 70 94 ANLN Actin-binding protein anillin yes no 3;4 6.6188E-21 85.11 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 11754000 1448100 10306000 0 0 0 0 6080 1533 6171 26978;26979 17790;17791 17790 2 RCTYLVLDEADR ESGKTNLRRCTYLVLD LVLDEADRMLDMGFEP R R C D R M 1 2 0 2 1 0 1 0 0 0 2 0 0 0 0 0 1 0 1 1 0 12 1 1509.7246 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 239 250 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 3 0.01944 45.213 By matching By matching By matching By matching By matching By MS/MS 1 959790 0 0 0 0 0 959790 6081 1361;629 6172 26980 17792 17792 1 RDAALAVAEAMADK NLSFCEIKRDAALAVA VAEAMADKAELEKLDL K R D D K A 6 1 0 2 0 0 1 0 0 0 1 1 1 0 0 0 0 0 0 1 0 14 1 1430.7188 P46060;F8W7I9;H0Y4Q3 P46060 307 320 RANGAP1 Ran GTPase-activating protein 1 yes no 3 0.016896 40.798 By matching By MS/MS By matching By matching By matching By matching 1 7319600 0 7319600 0 0 0 0 6082 921 6173 26981 17793 17793 1 RDAEDAMDAMDGAVLDGR AFVRFHDKRDAEDAMD DGAVLDGRELRVQMAR K R D G R E 4 2 0 5 0 0 1 2 0 0 1 0 2 0 0 0 0 0 0 1 0 18 1 1906.8149 Q8NAK9;Q01130;H0YG49 Q8NAK9 66 83 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 yes no 3 0.0008788 56.719 By matching By matching By matching By MS/MS By matching By matching 1 2673600 0 0 0 2673600 0 0 6083 1026 6174 26982 17794 17794 1 RDEEPESIEGKVK ESQALKTKRDEEPESI ESIEGKVKNDICEEKK K R D V K N 0 1 0 1 0 0 4 1 0 1 0 2 0 0 1 1 0 0 0 1 0 13 2 1514.7577 O15014 O15014 928 940 ZNF609 Zinc finger protein 609 yes yes 3 0.0063781 72.321 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3799900 440850 1120400 0 419630 0 1819000 6084 701 6175 26983;26984;26985;26986 17795 17795 1 RDEFEFLEK EIEQSLTKRDEFEFLE DEFEFLEKASKLRGIS K R D E K A 0 1 0 1 0 0 3 0 0 0 1 1 0 2 0 0 0 0 0 0 0 9 1 1211.5823 Q14258 Q14258 302 310 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 0.035017 89.171 By MS/MS By matching By matching By matching By matching By matching 1 35187000 35187000 0 0 0 0 0 6085 1105 6176 26987 17796 17796 1 RDFSAPTLEDHFNK DEDEEVYKRDFSAPTL TLEDHFNKTILPKVMQ K R D N K T 1 1 1 2 0 0 1 0 1 0 1 1 0 2 1 1 1 0 0 0 0 14 1 1675.7954 P55081 P55081 358 371 MFAP1 Microfibrillar-associated protein 1 yes yes 3 4.0784E-05 90.689 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 3225600 0 925590 0 268510 0 2031500 6086 967 6177 26988;26989;26990 17797;17798;17799 17798 3 RDGRCATGILIHLAK CNCSYCRKRDGRCATG GILIHLAKFYGYDNVK K R D A K F 2 2 0 1 1 0 0 2 1 2 2 1 0 0 0 0 1 0 0 0 0 15 2 1679.9253 C9K0Y1;Q96GN5-4;Q96GN5-2;Q96GN5 C9K0Y1 372 386 CDCA7L Cell division cycle-associated 7-like protein yes no 4 0.0052412 51.939 By matching By matching By MS/MS By matching By matching By matching 1 1282000 0 0 1282000 0 0 0 6087 280 6178 26991 17800 17800 1 RDGSLHVTCTDQETGK ILAVLTMKRDGSLHVT CTDQETGKCEAISIEI K R D G K C 0 1 0 2 1 1 1 2 1 0 1 1 0 0 0 1 3 0 0 1 0 16 1 1802.8217 Q0VDF9 Q0VDF9 484 499 HSPA14 Heat shock 70 kDa protein 14 yes yes 3;4 1.3836E-11 96.247 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2 2 9867700 759920 987010 788580 730010 3487400 3114800 6088 1056 6179 26992;26993;26994;26995;26996;26997;26998;26999 17801;17802;17803;17804;17805;17806 17803 6 RDGWPAMCIHGDK DDLTRRMRRDGWPAMC AMCIHGDKSQPERDWV R R D D K S 1 1 0 2 1 0 0 2 1 1 0 1 1 0 1 0 0 1 0 0 0 13 1 1541.6868 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 361 373 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 3 0.0033562 59.225 By matching By matching By matching By MS/MS By MS/MS By matching 1 2 2 2 10457000 0 2301700 2422200 1539500 4194000 0 6089 1361;629 6180 27000;27001;27002;27003;27004;27005;27006 17807;17808;17809 17808 3 RDHANYEEDENGDITPIKAK IGKKFARKRDHANYEE DITPIKAKKMFLKPQD K R D A K K 2 1 2 3 0 0 3 1 1 2 0 2 0 0 1 0 1 0 1 0 0 20 2 2314.0826 Q99547;H3BSB3;H3BNT4 Q99547 133 152 MPHOSPH6 M-phase phosphoprotein 6 yes no 4 0.00021969 63.044 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 14538000 1791600 2161100 4616100 0 2287800 3681600 6090 1427 6181 27007;27008;27009;27010;27011 17810;17811;17812 17811 3 RDILSFDK RKSESKEKRDILSFDK RDILSFDKIKEQRERE K R D D K I 0 1 0 2 0 0 0 0 0 1 1 1 0 1 0 1 0 0 0 0 0 8 1 992.5291 Q14151 Q14151 609 616 SAFB2 Scaffold attachment factor B2 yes yes 2 0.00012115 117.53 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 16761000 0 2325100 2943400 1900200 0 9592600 6091 1097 6182 27012;27013;27014;27015 17813;17814 17813 2 RDILSFDKIK RKSESKEKRDILSFDK ILSFDKIKEQRERERQ K R D I K E 0 1 0 2 0 0 0 0 0 2 1 2 0 1 0 1 0 0 0 0 0 10 2 1233.7081 Q14151 Q14151 609 618 SAFB2 Scaffold attachment factor B2 yes yes 3 2.4264E-23 127.83 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 20101000 2070300 1214700 6555400 1656600 2961400 5642800 6092 1097 6183 27016;27017;27018;27019;27020;27021 17815;17816;17817;17818 17816 4 RDISEEVQLHRTLLAR FENEDNSKRDISEEVQ LHRTLLARSERKIPRY K R D A R S 1 3 0 1 0 1 2 0 1 1 3 0 0 0 0 1 1 0 0 1 0 16 2 1935.065 Q8IWY8-2;Q8IWY8;Q8IWY8-4 Q8IWY8-2 457 472 ZSCAN29 Zinc finger and SCAN domain-containing protein 29 yes no 4 0.0017053 68.481 By matching By matching By MS/MS By matching By matching By matching 1 6575800 0 0 6575800 0 0 0 6093 1282 6184 27022 17819 17819 1 RDITVLDLGCGK EKVRQKKKRDITVLDL VLDLGCGKGGDLLKWK K R D G K G 0 1 0 2 1 0 0 2 0 1 2 1 0 0 0 0 1 0 0 1 0 12 1 1345.7024 O43148;O43148-2;B7Z8S9 O43148 197 208 RNMT mRNA cap guanine-N7 methyltransferase yes no 3 0.0021225 65.809 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 4805500 0 395790 0 0 0 4409700 6094 709 6185 27023;27024 17820;17821 17820 2 RDLMACAQTGSGK AIPIIKEKRDLMACAQ CAQTGSGKTAAFLLPI K R D G K T 2 1 0 1 1 1 0 2 0 0 1 1 1 0 0 1 1 0 0 0 0 13 1 1393.6442 O00571;O00571-2;B4DLU5;B4DXX7;O15523;C9J081;D6RCM4;E9PCD8;Q9NQI0-2;D6RDK4;Q9NQI0;H0Y960 O00571 218 230 DDX3X;DDX3Y;DDX4 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX4 yes no 2;3 0.0010278 86.498 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 3 4 4 5 4 209830000 32603000 5213600 43829000 27261000 46025000 54895000 6095 693 6186;6187 27025;27026;27027;27028;27029;27030;27031;27032;27033;27034;27035;27036;27037;27038;27039;27040;27041;27042;27043;27044;27045;27046;27047;27048;27049 17822;17823;17824;17825;17826;17827;17828;17829;17830;17831;17832 17829 70 10 RDPTAEQFQEELEK LRFESTMKRDPTAEQF QFQEELEKFQQAIDSR K R D E K F 1 1 0 1 0 2 4 0 0 0 1 1 0 1 1 0 1 0 0 0 0 14 1 1718.8111 P31944 P31944 54 67 CASP14 Caspase-14;Caspase-14 subunit p19;Caspase-14 subunit p10 yes yes 3 1.6093E-08 99.927 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 13598000 1116600 3225400 7369000 0 0 1887000 6096 888 6188 27050;27051;27052;27053 17833;17834;17835;17836;17837 17836 4 RDQAEEEPNRIPSR TPKPGKRKRDQAEEEP EPNRIPSRSLRRTKLN K R D S R S 1 3 1 1 0 1 3 0 0 1 0 0 0 0 2 1 0 0 0 0 0 14 2 1695.8289 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7;Q14676-4 Q14676 1866 1879 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3;4 0.00099168 71.513 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 1 26420000 2315300 5444300 5531100 4514400 3855900 4758900 6097 1109 6189 27054;27055;27056;27057;27058;27059;27060;27061;27062;27063 17838;17839;17840;17841;17842;17843;17844 17840 7 RDQPAFTPSGILTPHALGSR KEKRKRMKRDQPAFTP TPHALGSRNSPGSQVA K R D S R N 2 2 0 1 0 1 0 2 1 1 2 0 0 1 3 2 2 0 0 0 0 20 1 2120.1127 Q9H0D6-2;B4DZC3;Q9H0D6 Q9H0D6-2 351 370 XRN2 5-3 exoribonuclease 2 yes no 3 0.0014299 48.706 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 31566000 0 0 8258800 12988000 10319000 0 6098 146 6190 27064;27065;27066 17845;17846 17845 2 RDSFDNCSLGESSK NAIKRLHKRDSFDNCS CSLGESSKIGISDISS K R D S K I 0 1 1 2 1 0 1 1 0 0 1 1 0 1 0 4 0 0 0 0 0 14 1 1600.6787 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1686 1699 RIF1 Telomere-associated protein RIF1 yes no 2;3 1.9805E-20 110.22 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 2 2 2 27002000 0 4479800 4295900 2583000 6088100 9555400 6099 1201 6191 27067;27068;27069;27070;27071;27072;27073;27074;27075 17847;17848;17849;17850;17851 17850 5 RDVVGNDVATILSR EEQREQEKRDVVGNDV DVATILSRRIAVEYSD K R D S R R 1 2 1 2 0 0 0 1 0 1 1 0 0 0 0 1 1 0 0 3 0 14 1 1513.8213 Q9Y6W5 Q9Y6W5 462 475 WASF2 Wiskott-Aldrich syndrome protein family member 2 yes yes 3 0.014187 42.191 By matching By matching By matching By matching By matching By MS/MS 1 18999000 0 0 0 0 0 18999000 6100 1663 6192 27076 17852 17852 1 REAEEVYRNSMPASSFQQQK VEKARAKKREAEEVYR ASSFQQQKLRVCEVCS K R E Q K L 2 2 1 0 0 3 3 0 0 0 0 1 1 1 1 3 0 0 1 1 0 20 2 2384.1179 B7Z500;Q9Y383-2;Q9Y383;B7Z4Q3 B7Z500 164 183 LUC7L2;C7orf55 Putative RNA-binding protein Luc7-like 2;UPF0562 protein C7orf55 yes no 4 8.7005E-11 89.502 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 13886000 4087400 3597400 0 0 0 6201400 6101 186 6193 27077;27078;27079 17853;17854;17855 17854 3 REAFLEQFRK RQYDKLRKREAFLEQF AFLEQFRKEDMFKDNF K R E R K E 1 2 0 0 0 1 2 0 0 0 1 1 0 2 0 0 0 0 0 0 0 10 2 1322.7095 P23258 P23258 401 410 TUBG1 Tubulin gamma-1 chain yes yes 3 0.00029823 107.03 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 10279000 0 0 1853100 1118300 2898600 4408600 6102 866 6194 27080;27081;27082;27083 17856;17857 17856 2 REDPSFERYPK KKARPTARREDPSFER PSFERYPKNFSDSRRN R R E P K N 0 2 0 1 0 0 2 0 0 0 0 1 0 1 2 1 0 0 1 0 0 11 2 1422.6892 Q9NWH9;H7C3F4;A8K5V8 Q9NWH9 811 821 SLTM SAFB-like transcription modulator yes no 3 0.0044873 91.701 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 17774000 1555300 2170600 2416400 1124200 5308400 5199300 6103 1554 6195 27084;27085;27086;27087;27088;27089 17858;17859;17860;17861;17862 17861 4 REEAEKLPEVSK SKAKRKKKREEAEKLP EKLPEVSKEMYYNIAM K R E S K E 1 1 0 0 0 0 4 0 0 0 1 2 0 0 1 1 0 0 0 1 0 12 2 1413.7464 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;Q76FK4-3 F5H101 976 987 NOL8 Nucleolar protein 8 yes no 3 0.015937 64.313 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 9132600 0 1432400 1387400 0 2632400 3680400 6104 27 6196 27090;27091;27092;27093 17863 17863 1 REEEEQQEGGFASPR EREKENSKREEEEQQE EGGFASPRTGKGKWKR K R E P R T 1 2 0 0 0 2 5 2 0 0 0 0 0 1 1 1 0 0 0 0 0 15 1 1747.7762 B5ME40;F5GXG0;Q96T88 B5ME40 242 256 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 3 2.9096E-87 140.96 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 34321000 3503200 5356900 6088800 1608000 4152400 13612000 6105 175 6197 27094;27095;27096;27097;27098;27099 17864;17865;17866;17867 17865 4 REEEEQQEGGFASPRTGK EREKENSKREEEEQQE FASPRTGKGKWKRKSA K R E G K G 1 2 0 0 0 2 5 3 0 0 0 1 0 1 1 1 1 0 0 0 0 18 2 2033.9403 B5ME40;F5GXG0;Q96T88 B5ME40 242 259 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 3 0.0054193 65.808 By matching By matching By MS/MS By matching By matching By matching 1 1 948050 299070 0 648980 0 0 0 6106 175 6198 27100;27101 17868 17868 1 REGAGDAEADPLEPPPPQQQLGLSLRR FRRTTIAKREGAGDAE QLGLSLRRSGRQPKRT K R E R R S 3 3 0 2 0 3 3 3 0 0 4 0 0 0 5 1 0 0 0 0 0 27 2 2896.4791 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 37 63 DIDO1 Death-inducer obliterator 1 yes no 4 1.3199E-18 83.221 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 165370000 24840000 10887000 25701000 93844000 10100000 0 6107 1447 6199 27102;27103;27104;27105;27106 17869;17870;17871;17872;17873 17873 5 REGLGLDVERVNK ISVKEQHKREGLGLDV LDVERVNKIAKRDIEQ K R E N K I 0 2 1 1 0 0 2 2 0 0 2 1 0 0 0 0 0 0 0 2 0 13 2 1483.8107 O15226;G3V1N1 O15226 588 600 NKRF NF-kappa-B-repressing factor yes no 3 5.5279E-46 126.56 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 43456000 4720100 4966000 4643500 6353500 12190000 10582000 6108 578 6200 27107;27108;27109;27110;27111;27112 17874;17875;17876;17877;17878 17877 5 REHALTSGTIK DGHEFIVKREHALTSG ALTSGTIKAMLSGPGQ K R E I K A 1 1 0 0 0 0 1 1 1 1 1 1 0 0 0 1 2 0 0 0 0 11 1 1211.6622 E5RHG8;E5RJ89;Q15369;E5RGD9 E5RHG8 33 43 TCEB1 Transcription elongation factor B polypeptide 1 yes no 3 0.00022571 96.604 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 3134600 0 1785500 1152300 0 0 196700 6109 340 6201 27113;27114;27115 17879;17880 17880 2 REHPADFVAQK KFQERHMKREHPADFV PADFVAQKLQGVLFIC K R E Q K L 2 1 0 1 0 1 1 0 1 0 0 1 0 1 1 0 0 0 0 1 0 11 1 1296.6575 Q9H609 Q9H609 55 65 ZNF576 Zinc finger protein 576 yes yes 3 0.0034234 69.815 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1501600 0 0 696300 236550 0 568770 6110 1494 6202 27116;27117;27118 17881 17881 1 REILSDRHAFETAR KDFGEAAKREILSDRH RHAFETARRLSHDNME K R E A R R 2 3 0 1 0 0 2 0 1 1 1 0 0 1 0 1 1 0 0 0 0 14 2 1699.8754 Q96QC0 Q96QC0 435 448 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes yes 4 0.016271 45.992 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 4103600 0 0 0 752470 2051500 1299600 6111 1414 6203 27119;27120;27121 17882;17883 17882 2 RELEVDSQCVR MDCGLTGKRELEVDSQ EVDSQCVRIKTESEEA K R E V R I 0 2 0 1 1 1 2 0 0 0 1 0 0 0 0 1 0 0 0 2 0 11 1 1389.6671 Q5VWQ0 Q5VWQ0 728 738 RSBN1 Round spermatid basic protein 1 yes yes 3 0.010951 55.04 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 4225300 0 858740 750800 303290 827310 1485100 6112 1209 6204 27122;27123;27124;27125;27126 17884 17884 1 RELHGQNPVVTPCNK KLMDLLPKRELHGQNP PVVTPCNKQFLSQFEM K R E N K Q 0 1 2 0 1 1 1 1 1 0 1 1 0 0 2 0 1 0 0 2 0 15 1 1747.8788 Q16630-3;F8WJN3;Q16630;Q16630-2 Q16630-3 147 161 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 yes no 3 0.0040948 49.149 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1693500 0 0 0 299290 663300 730870 6113 573 6205 27127;27128;27129 17885 17885 1 RELHPPATSHEAPGTK TAGGTDLKRELHPPAT SHEAPGTKRSPSAPAA K R E T K R 2 1 0 0 0 0 2 1 2 0 1 1 0 0 3 1 2 0 0 0 0 16 1 1726.8751 E9PE58;Q15345-3;Q15345 E9PE58 318 333 LRRC41 Leucine-rich repeat-containing protein 41 yes no 4 0.0018799 64.454 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 8066900 0 1798000 2232900 0 1770000 2266000 6114 424 6206 27130;27131;27132;27133 17886 17886 1 RELKEDSLWSAK QENEIGKKRELKEDSL EDSLWSAKEISNNDKL K R E A K E 1 1 0 1 0 0 2 0 0 0 2 2 0 0 0 2 0 1 0 0 0 12 2 1460.7623 O60934 O60934 624 635 NBN Nibrin yes yes 3 0.011075 69.345 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 10704000 0 1681500 2108700 953070 2106800 3854000 6115 736 6207 27134;27135;27136;27137;27138 17887;17888 17888 2 RENFCNIHVSLVPQPSSTGEQK RQFQFKVKRENFCNIH PSSTGEQKTKPTQNSV K R E Q K T 0 1 2 0 1 2 2 1 1 1 1 1 0 1 2 3 1 0 0 2 0 22 1 2526.2285 P17812;B7Z9C4 P17812 172 193 CTPS1 CTP synthase 1 yes no 4 4.4531E-06 61.862 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 45612000 0 38246000 0 3435100 3931500 0 6116 852 6208 27139;27140;27141 17889;17890 17890 2 REPFLLSGGDDGALK VNVISWSRREPFLLSG GGDDGALKIWDLRQFK R R E L K I 1 1 0 2 0 0 1 3 0 0 3 1 0 1 1 1 0 0 0 0 0 15 1 1573.81 Q9BQ67 Q9BQ67 319 333 GRWD1 Glutamate-rich WD repeat-containing protein 1 yes yes 3 9.4232E-06 90.259 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 34970000 0 0 3246600 0 6207600 25516000 6117 1438 6209 27142;27143;27144 17891;17892 17891 2 REPGYTPPGAGNQNPPGMYPVTGPK QGHPNTWKREPGYTPP MYPVTGPKKTYITDPV K R E P K K 1 1 2 0 0 1 1 5 0 0 0 1 1 0 7 0 2 0 2 1 0 25 1 2581.2384 Q93052;C9JUT4;C9JXK9 Q93052 328 352 LPP Lipoma-preferred partner yes no 3 0.0018259 40.625 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 16339000 10030000 0 0 898240 1597500 3813700 6118 1367 6210 27145;27146;27147;27148 17893;17894;17895;17896 17896 4 REQGNIEEAVR LNNLANIKREQGNIEE GNIEEAVRLYRKALEV K R E V R L 1 2 1 0 0 1 3 1 0 1 0 0 0 0 0 0 0 0 0 1 0 11 1 1299.6531 O15294;O15294-2;O15294-3 O15294 338 348 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes no 3 0.006772 61.235 By matching By matching By matching By matching By matching By MS/MS 1 695490 0 0 0 0 0 695490 6119 705 6211 27149 17897 17897 1 RESQSVEEALK IDNGFMRKRESQSVEE QSVEEALKKLGIQVKV K R E L K K 1 1 0 0 0 1 3 0 0 0 1 1 0 0 0 2 0 0 0 1 0 11 1 1274.6466 F8W720;B4DUT7;P49915 F8W720 179 189 GMPS GMP synthase [glutamine-hydrolyzing] yes no 3 0.0014546 85.672 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 6226100 612630 1017700 976340 513480 1149900 1956000 6120 129 6212 27150;27151;27152;27153;27154;27155 17898;17899;17900;17901;17902;17903 17899 6 RESQSVEEALKK IDNGFMRKRESQSVEE SVEEALKKLGIQVKVI K R E K K L 1 1 0 0 0 1 3 0 0 0 1 2 0 0 0 2 0 0 0 1 0 12 2 1402.7416 F8W720;B4DUT7;P49915 F8W720 179 190 GMPS GMP synthase [glutamine-hydrolyzing] yes no 3 0.0058494 84.734 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 38566000 0 10589000 14041000 0 13937000 0 6121 129 6213 27156;27157;27158 17904;17905;17906 17905 3 RESVCNKADAESEPVAQK GFVQSDSKRESVCNKA ESEPVAQKSQLDRTVC K R E Q K S 3 1 1 1 1 1 3 0 0 0 0 2 0 0 1 2 0 0 0 2 0 18 2 2016.9535 O95243-2 O95243-2 264 281 MBD4 Methyl-CpG-binding domain protein 4 no no 3;4 2.6958E-21 102.36 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 3 2 2 2 2 2 40357000 8338900 5321800 7728000 11644000 4552800 2772100 6122 769 6214 27159;27160;27161;27162;27163;27164;27165;27166;27167;27168;27169;27170;27171 17907;17908;17909;17910;17911;17912;17913;17914;17915;17916;17917;17918;17919 17915 13 RETGNYTCEFCGK KEVRQCQKRETGNYTC YTCEFCGKQYKYYTPY K R E G K Q 0 1 1 0 2 0 2 2 0 0 0 1 0 1 0 0 2 0 1 0 0 13 1 1620.6661 Q5T7W0-2;B1ALC2;B5MDS3 Q5T7W0-2 239 251 ZNF618 Zinc finger protein 618 yes no 3 1.5217E-05 96.464 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 7821000 1543700 1060700 906510 1023600 1280600 2005800 6123 1195 6215 27172;27173;27174;27175;27176;27177;27178 17920;17921;17922;17923 17921 3 RETGNYTCEFCGKQYK KEVRQCQKRETGNYTC EFCGKQYKYYTPYQEH K R E Y K Y 0 1 1 0 2 1 2 2 0 0 0 2 0 1 0 0 2 0 2 0 0 16 2 2039.8829 Q5T7W0-2;B1ALC2;B5MDS3 Q5T7W0-2 239 254 ZNF618 Zinc finger protein 618 yes no 3 0.0016335 72.428 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 3850800 1279800 0 1027000 0 0 1544100 6124 1195 6216 27179;27180;27181 17924;17925;17926;17927;17928 17927 5 REVDDLGPEVGDIK DEACKRIKREVDDLGP GPEVGDIKIIPLYSTL K R E I K I 0 1 0 3 0 0 2 2 0 1 1 1 0 0 1 0 0 0 0 2 0 14 1 1540.7733 F5H6K0;O43143 F5H6K0 360 373 DHX15 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 3 0.00057272 73.722 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 17852000 1569800 4284200 3017100 756560 0 8224800 6125 524 6217 27182;27183;27184;27185;27186 17929;17930;17931;17932;17933 17930 4 REVVVYAPLSK VALEVPPKREVVVYAP VVYAPLSKKQEIFYTA K R E S K K 1 1 0 0 0 0 1 0 0 0 1 1 0 0 1 1 0 0 1 3 0 11 1 1259.7238 Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-4;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9 Q9NRZ9-6 334 344 HELLS Lymphoid-specific helicase yes no 3 0.029798 43.761 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4284400 0 1263400 1061100 0 0 1959800 6126 1540 6218 27187;27188;27189 17934 17934 1 RFANFSGGK NVLTLSLKRFANFSGG FANFSGGKITKDVGYP K R F G K I 1 1 1 0 0 0 0 2 0 0 0 1 0 2 0 1 0 0 0 0 0 9 1 982.49846 Q9P275;Q9P275-2;E9PEW0;F5H3B9 Q9P275 330 338 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.034145 89.886 By matching By MS/MS By matching By matching By matching By matching 1 1 6351500 0 2874400 3477100 0 0 0 6127 1576 6219 27190;27191 17935 17935 1 RFCNTTCLGAYKK LFHEGQQKRFCNTTCL TCLGAYKKKNTRVYPC K R F K K K 1 1 1 0 2 0 0 1 0 0 1 2 0 1 0 0 2 0 1 0 0 13 2 1617.7756 Q14202-2;Q14202-3;A6NL54;A6NHN7;Q14202;A6NHB5 Q14202-2 478 490 ZMYM3 Zinc finger MYM-type protein 3 yes no 3 0.023113 58.268 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 11383000 0 1951400 1832200 1451300 0 6148600 6128 1102 6220 27192;27193;27194;27195 17936;17937 17937 2 RFDDAVVQSDMK DAKRLIGRRFDDAVVQ AVVQSDMKHWPFMVVN R R F M K H 1 1 0 3 0 1 0 0 0 0 0 1 1 1 0 1 0 0 0 2 0 12 1 1409.6609 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25 P11142 77 88 HSPA8 Heat shock cognate 71 kDa protein yes no 2;3 0.0061479 89.26 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 1 2 1 1 22281000 2810900 4325400 1818600 2161600 2973900 8191100 6129 824 6221 27196;27197;27198;27199;27200;27201;27202;27203;27204 17938;17939;17940 17938 3 RFDFEQVTVK EFRSYLEKRFDFEQVT DFEQVTVKKFRTWAER K R F V K K 0 1 0 1 0 1 1 0 0 0 0 1 0 2 0 0 1 0 0 2 0 10 1 1267.6561 Q8WYQ5-3;Q8WYQ5 Q8WYQ5-3 447 456 DGCR8 Microprocessor complex subunit DGCR8 yes no 2 0.024972 87.184 By matching By matching By matching By matching By matching By MS/MS 1 3448400 0 0 0 0 0 3448400 6130 1346 6222 27205 17941 17941 1 RFDRAEAEYIAAK LDYSYARKRFDRAEAE EAEYIAAKLDIQRKTE K R F A K L 4 2 0 1 0 0 2 0 0 1 0 1 0 1 0 0 0 0 1 0 0 13 2 1538.7841 Q5T7V8-3;Q5T7V8-4;Q5T7V8 Q5T7V8-3 41 53 GORAB RAB6-interacting golgin yes no 3 0.0041121 76.165 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2450300 0 306190 1020800 0 0 1123300 6131 1194 6223 27206;27207;27208 17942 17942 1 RFGQNHNLLK YKCPECGKRFGQNHNL GQNHNLLKHQKIHAGE K R F L K H 0 1 2 0 0 1 0 1 1 0 2 1 0 1 0 0 0 0 0 0 0 10 1 1225.668 Q9UEG4 Q9UEG4 298 307 ZNF629 Zinc finger protein 629 yes yes 3 0.0048567 76.064 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 10040000 0 1057500 3394500 1239200 1735600 2612700 6132 1586 6224 27209;27210;27211;27212;27213 17943;17944;17945;17946 17944 4 RFGQSSVLAIHAR FKCPECGKRFGQSSVL SVLAIHARTHLPGRTY K R F A R T 2 2 0 0 0 1 0 1 1 1 1 0 0 1 0 2 0 0 0 1 0 13 1 1440.795 H3BS42;Q9H5H4;B7Z2Y7 H3BS42 406 418 ZNF768 Zinc finger protein 768 yes no 3 0.00068297 89.663 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 2 1 1 1 1 16827000 3361300 2837000 2776000 742480 1399100 5711000 6133 646 6225 27214;27215;27216;27217;27218;27219;27220 17947;17948;17949;17950;17951 17947 5 RFGVPVIADGGIQNVGHIAK YKVSEYARRFGVPVIA QNVGHIAKALALGAST R R F A K A 2 1 1 1 0 1 0 4 1 3 0 1 0 1 1 0 0 0 0 3 0 20 1 2047.1327 H0Y4R1;P12268 H0Y4R1 312 331 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes no 3 4.1851E-52 116.13 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 36074000 23943000 0 0 12131000 0 0 6134 610 6226 27221;27222 17952;17953 17953 2 RFHWTAYLR KVLCLHLKRFHWTAYL FHWTAYLRNKVDTYVE K R F L R N 1 2 0 0 0 0 0 0 1 0 1 0 0 1 0 0 1 1 1 0 0 9 1 1248.6516 Q6JHV3;H0YMI4;Q9Y6I4;B3KMX7;H0YLB7;H0YKU8;F5H1A6;B4DWJ6 Q6JHV3 391 399 USP3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 3 0.011271 68.847 By matching By matching By matching By matching By matching By MS/MS 1 8142200 0 0 0 0 0 8142200 6135 628 6227 27223 17954 17954 1 RFIPLAELK VQFVRMMKRFIPLAEL FIPLAELKSYHQAHKA K R F L K S 1 1 0 0 0 0 1 0 0 1 2 1 0 1 1 0 0 0 0 0 0 9 1 1085.6597 Q9P016 Q9P016 171 179 THYN1 Thymocyte nuclear protein 1 yes yes 2 3.5106E-06 117.02 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 55565000 15617000 0 18539000 0 3463200 17947000 6136 1570 6228 27224;27225;27226;27227 17955;17956;17957 17955 3 RFLINTIK CPLASTNKRFLINTIK RFLINTIKNTLPSHKE K R F I K N 0 1 1 0 0 0 0 0 0 2 1 1 0 1 0 0 1 0 0 0 0 8 1 1003.6179 Q9Y2S0-2 Q9Y2S0-2 45 52 POLR1D DNA-directed RNA polymerases I and III subunit RPAC2 yes yes 2 0.031718 106.68 By matching By matching By matching By matching By matching By MS/MS 1 1 1 23833000 0 0 4693000 0 3728500 15411000 6137 1637 6229 27228;27229;27230 17958 17958 1 RFSCIIGPNGSGK KILGPFHKRFSCIIGP IGPNGSGKSNVIDSML K R F G K S 0 1 1 0 1 0 0 3 0 2 0 1 0 1 1 2 0 0 0 0 0 13 1 1391.698 E9PD53;Q9NTJ3;Q9NTJ3-2;E7ET04;C9JR83;C9J9E4;C9JWF0;C9IYK2;C9JJ64 E9PD53 82 94 SMC4 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 4 yes no 3 0.037857 35.763 By matching By matching By matching By matching By matching By MS/MS 1 1 5958000 0 0 0 0 1550600 4407400 6138 419 6230 27231;27232 17959 17959 1 RFSHSGSYSSHISSK YECPNCKKRFSHSGSY YSSHISSKKCISLIPV K R F S K K 0 1 0 0 0 0 0 1 2 1 0 1 0 1 0 7 0 0 1 0 0 15 1 1665.7859 F5H4I8;E9PCM7;F5H2R1;P37275;Q2KJ05;F5H8J0;F5H838;Q5VZ84;G3V1R3;F5H1R1;H0YMN2;H0YND9;H0YME0;H0YKM9;H0YMD3;H0YK86;F5H601;E7ESP8;E7EUW9;F5H814;O60315 F5H4I8 209 223 ZEB1;ZEB2 Zinc finger E-box-binding homeobox 1;Zinc finger E-box-binding homeobox 2 yes no 4 0.0014421 63.212 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 5041200 0 0 1694900 1320600 680330 1345300 6139 415 6231 27233;27234;27235;27236 17960;17961;17962 17961 3 RFSQTSNFTQHQR YVCNECGKRFSQTSNF SNFTQHQRIHTGEKLY K R F Q R I 0 2 1 0 0 3 0 0 1 0 0 0 0 2 0 2 2 0 0 0 0 13 1 1635.7866 E7ENV5;O75123 E7ENV5 315 327 ZNF623 Zinc finger protein 623 yes no 3 0.00022327 93.478 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 7870800 0 1524500 1393300 661670 1517700 2773700 6140 353 6232 27237;27238;27239;27240;27241 17963;17964;17965;17966;17967;17968;17969 17967 7 RFTIHRTSNVLTLSLK KKKVPASKRFTIHRTS NVLTLSLKRFANFSGG K R F L K R 0 2 1 0 0 0 0 0 1 1 3 1 0 1 0 2 3 0 0 1 0 16 2 1885.0898 Q9P275;Q9P275-2;E9PEW0;F5H3B9 Q9P275 314 329 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 4 0.011829 43.557 By matching By matching By matching By MS/MS By matching By matching 1 6730500 0 0 0 6730500 0 0 6141 1576 6233 27242 17970 17970 1 RFTRSDELQR CTWSYCGKRFTRSDEL TRSDELQRHKRTHTGE K R F Q R H 0 3 0 1 0 1 1 0 0 0 1 0 0 1 0 1 1 0 0 0 0 10 2 1306.6742 P08047;G5E9M8 P08047 666 675 SP1 Transcription factor Sp1 no no 3 4.0718E-34 132.01 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 69098000 0 14987000 20658000 8752500 8647700 16053000 6142 804 6234 27243;27244;27245;27246;27247 17971;17972 17971 2 RFTSLKEHIK PYCDRGYKRFTSLKEH TSLKEHIKYRHEKNED K R F I K Y 0 1 0 0 0 0 1 0 1 1 1 2 0 1 0 1 1 0 0 0 0 10 2 1257.7194 F5H4I8;E9PCM7;F5H2R1;P37275;Q2KJ05;F5H8J0;F5H838;Q5VZ84;F5H1R1;H0YMN2;H0YND9;F6TDF5 F5H4I8 114 123 ZEB1 Zinc finger E-box-binding homeobox 1 yes no 3 1.7413E-14 119.34 By matching By matching By matching By matching By matching By MS/MS 1 1 2633300 0 0 0 0 1368300 1265000 6143 415 6235 27248;27249 17973 17973 1 RFVNDTLRSEFHK VDDQKKDKRFVNDTLR TLRSEFHKKFMEKYIK K R F H K K 0 2 1 1 0 0 1 0 1 0 1 1 0 2 0 1 1 0 0 1 0 13 2 1647.8481 Q9P013 Q9P013 209 221 CWC15 Spliceosome-associated protein CWC15 homolog yes yes 4 0.0012512 75.739 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 22188000 0 0 6279100 3766300 3884700 8257800 6144 1569 6236 27250;27251;27252;27253 17974;17975;17976;17977 17977 4 RGAAGDWGERANQVLK ADNSFDAKRGAAGDWG ERANQVLKFTKGKSFR K R G L K F 3 2 1 1 0 1 1 3 0 0 1 1 0 0 0 0 0 1 0 1 0 16 2 1726.8863 Q14978;Q14978-3;Q14978-2 Q14978 648 663 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 3;4 0.0017424 70.373 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 160180000 36854000 22205000 10363000 11263000 55175000 24318000 6145 1120 6237 27254;27255;27256;27257;27258;27259;27260;27261;27262;27263;27264;27265 17978;17979;17980;17981;17982;17983;17984;17985;17986;17987 17985 9 RGAFSSVSMSGGAGR SAIVGGGKRGAFSSVS SMSGGAGRCSSGGFGS K R G G R C 2 2 0 0 0 0 0 4 0 0 0 0 1 1 0 4 0 0 0 1 0 15 1 1425.6783 F8VS64;P19013;CON__P19013;F5H8K9;F8VX05;F8VZR6 F8VS64 27 41 KRT4 Keratin, type II cytoskeletal 4 yes no 3 0.0014162 65.467 By matching By matching By matching By matching By MS/MS By MS/MS 2 1 15180000 0 0 0 0 7220900 7959200 + 6146 300 6238;6239 27266;27267;27268 17988;17989;17990 17989 28 3 RGAGNGVVPAGVILER RDNDTKVKRGAGNGVV PAGVILERSQPPGEDS K R G E R S 2 2 1 0 0 0 1 4 0 1 1 0 0 0 1 0 0 0 0 3 0 16 1 1563.8845 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7;Q14676-4 Q14676 276 291 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3 0.0014075 55.912 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 91781000 0 0 39037000 9791500 5346600 37606000 6147 1109 6240 27269;27270;27271;27272 17991;17992;17993;17994 17993 4 RGAPAAATAPAPTAHKAK KLEGGGERRGAPAAAT APTAHKAKKAAPGAAG R R G A K K 8 1 0 0 0 0 0 1 1 0 0 2 0 0 3 0 2 0 0 0 0 18 2 1685.9325 Q92522 Q92522 128 145 H1FX Histone H1x yes yes 4 0.0017805 53.255 By matching By matching By matching By matching By MS/MS By matching 1 1 544410 0 0 0 133000 411410 0 6148 1350 6241 27273;27274 17995 17995 1 RGAPDPRVDDDSLGEFPVTNSR LRTDPLEKRGAPDPRV EFPVTNSRARKRILEP K R G S R A 1 3 1 4 0 0 1 2 0 0 1 0 0 1 3 2 1 0 0 2 0 22 2 2399.1466 Q92785;B4DT58 Q92785 131 152 DPF2 Zinc finger protein ubi-d4 yes no 4 0.0042016 45.363 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 26167000 0 13364000 10159000 2643800 0 0 6149 1359 6242 27275;27276;27277 17996;17997 17997 2 RGAPPSSNIEDFHGLLPK ERSLFEKKRGAPPSSN DFHGLLPKGYPHLCSI K R G P K G 1 1 1 1 0 0 1 2 1 1 2 1 0 1 3 2 0 0 0 0 0 18 1 1934.001 P43243;A8MXP9;D6REM6;D6R991;H0Y8T4 P43243 270 287 MATR3 Matrin-3 yes no 3;4 2.7588E-06 88.951 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 2 1 1 65175000 0 29318000 6677300 11444000 4947100 12789000 6150 52 6243 27278;27279;27280;27281;27282;27283;27284 17998;17999;18000;18001;18002;18003 18003 5 RGDQLLSVNGVSVEGEHHEK ADRHGGLKRGDQLLSV VEGEHHEKAVELLKAA K R G E K A 0 1 1 1 0 1 3 3 2 0 2 1 0 0 0 2 0 0 0 3 0 20 1 2189.0825 G3V1D4;Q9NUP9;O14910 G3V1D4 112 131 LIN7C;LIN7A Protein lin-7 homolog C;Protein lin-7 homolog A yes no 4 0.00010221 73.984 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 15991000 2433400 1961500 3652500 1341800 1682900 4918600 6151 575 6244 27285;27286;27287;27288;27289;27290 18004;18005;18006 18004 2 RGFAFVTFDDHDSVDK TDRGSGKKRGFAFVTF DDHDSVDKIVIQKYHT K R G D K I 1 1 0 4 0 0 0 1 1 0 0 1 0 3 0 1 1 0 0 2 0 16 1 1854.8537 H0YH80;P09651-3;F8VXY0;F8VRQ1;P09651-2;F8W6I7;P09651;F8VSB5;F8W1S7;F8VTQ5;F8VZ49;Q32P51 H0YH80 17 32 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1-like 2 yes no 3 0.00015045 83.823 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 51919000 0 0 0 6337600 0 45582000 6152 537 6245 27291;27292 18007;18008 18007 2 RGFAFVTFDDHDTVDK EDRQSGKKRGFAFVTF DDHDTVDKIVVQKYHT K R G D K I 1 1 0 4 0 0 0 1 1 0 0 1 0 3 0 0 2 0 0 2 0 16 1 1868.8693 E7EWI9;E7ERJ4;P51991-2;P51991 E7EWI9 145 160 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 3 6.7962E-197 169.15 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 231640000 0 0 180750000 0 50882000 0 6153 371;955 6246 27293;27294;27295 18009;18010 18009 1 RGFAFVTFDDHDTVDKIVVQK EDRQSGKKRGFAFVTF VDKIVVQKYHTINGHN K R G Q K Y 1 1 0 4 0 1 0 1 1 1 0 2 0 3 0 0 2 0 0 4 0 21 2 2436.2438 E7EWI9;E7ERJ4;P51991-2;P51991 E7EWI9 145 165 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 4 2.7517E-134 142.23 By matching By matching By matching By MS/MS By matching By matching 1 162490000 0 0 0 162490000 0 0 6154 371;955 6247 27296 18011 18011 1 RGFGFVTFDDHDPVDK TDRQSGKKRGFGFVTF DDHDPVDKIVLQKYHT K R G D K I 0 1 0 4 0 0 0 2 1 0 0 1 0 3 1 0 1 0 0 2 0 16 1 1850.8588 P22626;P22626-2 P22626 153 168 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 3 1.3663E-65 135.57 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 60534000 0 7874900 0 29752000 22907000 0 6155 863 6248 27297;27298;27299 18012;18013 18012 1 RGFGFVYFQNHDAADK ADKQSGKKRGFGFVYF QNHDAADKAAVVKFHP K R G D K A 2 1 1 2 0 1 0 2 1 0 0 1 0 3 0 0 0 0 1 1 0 16 1 1870.8751 Q13151 Q13151 139 154 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 3;4 7.0841E-32 116.86 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 169180000 158940000 0 0 8891900 1355000 0 6156 1074 6249 27300;27301;27302 18014;18015 18015 1 RGGNRFEPYANPTK KRKEKNIKRGGNRFEP EPYANPTKRYRAFITN K R G T K R 1 2 2 0 0 0 1 2 0 0 0 1 0 1 2 0 1 0 1 0 0 14 2 1605.8012 P52272-2;P52272 P52272-2 56 69 HNRNPM Heterogeneous nuclear ribonucleoprotein M yes no 4 0.0046896 56.295 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 3430100 1305200 907780 0 0 1217100 0 6157 956 6250 27303;27304;27305 18016;18017 18016 2 RGGTMETDDHMGGIPARNSK ESIQGEARRGGTMETD GIPARNSKGERLLLYI R R G S K G 1 2 1 2 0 0 1 4 1 1 0 1 2 0 1 1 2 0 0 0 0 20 2 2128.9742 Q99755-2;Q99755-3;A6PW57;Q99755;B4DY52;A2A3N6 Q99755-2 360 379 PIP5K1A;PIPSL Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha;Putative PIP5K1A and PSMD4-like protein yes no 4 0.018795 36.657 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2273000 0 0 0 235300 712180 1325500 6158 32 6251 27306;27307;27308 18018 18018 1 RGHVLGNGSQVTQAANSGCSK SSETVFGKRGHVLGNG AANSGCSKAIGALASS K R G S K A 2 1 2 0 1 2 0 4 1 0 1 1 0 0 0 3 1 0 0 2 0 21 1 2127.0239 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 542 562 LUZP1 Leucine zipper protein 1 yes no 3;4 6.0097E-06 63.606 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 12500000 0 4325200 0 1665100 5762300 747820 6159 1265 6252 27309;27310;27311;27312;27313;27314 18019;18020;18021;18022;18023;18024 18021 6 RGISSSNEGVEEPSK ELVAKVKKRGISSSNE EGVEEPSKKRVIEGKN K R G S K K 0 1 1 0 0 0 3 2 0 1 0 1 0 0 1 4 0 0 0 1 0 15 1 1574.7536 Q9NXV6 Q9NXV6 128 142 CDKN2AIP CDKN2A-interacting protein yes yes 3 0.00040602 76.341 By MS/MS By matching By matching By MS/MS By matching By MS/MS 2 1 1 1 1 1 13219000 2181400 1516700 2163700 1690000 3252700 2414800 6160 1560 6253 27315;27316;27317;27318;27319;27320;27321 18025;18026;18027;18028 18025 4 RGISSSNEGVEEPSKK ELVAKVKKRGISSSNE GVEEPSKKRVIEGKNS K R G K K R 0 1 1 0 0 0 3 2 0 1 0 2 0 0 1 4 0 0 0 1 0 16 2 1702.8486 Q9NXV6 Q9NXV6 128 143 CDKN2AIP CDKN2A-interacting protein yes yes 3 0.00015255 88.319 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 67345000 9079300 8614500 11424000 11534000 12744000 13950000 6161 1560 6254 27322;27323;27324;27325;27326;27327 18029;18030;18031;18032;18033 18029 5 RGLNSQSSDDHLNK VPKPGSLKRGLNSQSS SSDDHLNKRSRSSSMS K R G N K R 0 1 2 2 0 1 0 1 1 0 2 1 0 0 0 3 0 0 0 0 0 14 1 1569.7495 Q96HA1-2;A8CG34-2;Q96HA1-3;A8MXF9;A8CG34;Q96HA1 Q96HA1-2 109 122 POM121;POM121C Nuclear envelope pore membrane protein POM 121;Nuclear envelope pore membrane protein POM 121C yes no 3 0.0023679 57.414 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 4954700 0 1240700 3004600 0 221830 487630 6162 34 6255 27328;27329;27330;27331 18034;18035 18035 2 RGLVGIEFKEK LPVEEAYKRGLVGIEF VGIEFKEKLLSAERAV K R G E K L 0 1 0 0 0 0 2 2 0 1 1 2 0 1 0 0 0 0 0 1 0 11 2 1274.7347 P15924;P15924-2 P15924 2318 2328 DSP Desmoplakin yes no 3 0.024715 67.879 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 4891300 0 0 1870900 1106600 0 1913800 6163 840 6256 27332;27333;27334 18036;18037 18036 2 RGPNYTSGYGTNSELSNPSETESERK YSGRGRGRRGPNYTSG SETESERKDELSDWSL R R G R K D 0 2 3 0 0 0 4 3 0 0 1 1 0 0 2 5 3 0 2 0 0 26 2 2859.2907 P51114-3;B4DXZ6;P51114;E7EU85;E9PFF5;P51114-2 P51114-3 306 331 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 4 0.001999 46.656 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 8111500 1444200 1531000 1910400 0 1034100 2191800 6164 140 6257 27335;27336;27337;27338;27339 18038;18039 18039 2 RGPPSDGHEALEK LNQSRGERRGPPSDGH DGHEALEK________ R R G E K - 1 1 0 1 0 0 2 2 1 0 1 1 0 0 2 1 0 0 0 0 0 13 1 1391.6793 H0Y5J9;F2Z2W0;Q9H2D6-5;F8W6V6;Q9H2D6-3;Q9H2D6-2;Q9H2D6 H0Y5J9 299 311 TRIOBP TRIO and F-actin-binding protein yes no 3 0.010589 48.277 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1446400 277360 199090 0 0 429680 540310 6165 477 6258 27340;27341;27342;27343 18040 18040 1 RGPQLVCTGSDDGTVK VNSCYPARRGPQLVCT GSDDGTVKLWDIRKKA R R G V K L 0 1 0 2 1 1 0 3 0 0 1 1 0 0 1 1 2 0 0 2 0 16 1 1688.8152 Q96DI7;B4DQJ1 Q96DI7 162 177 SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein yes no 3 0.0014279 55.755 By matching By matching By matching By matching By matching By MS/MS 1 1720000 0 0 0 0 0 1720000 6166 117 6259 27344 18041;18042 18042 2 RGPSEETGGAVFDHPAK SSSSSTRKRGPSEETG AVFDHPAKIAKSTKSS K R G A K I 2 1 0 1 0 0 2 3 1 0 0 1 0 1 2 1 1 0 0 1 0 17 1 1753.8384 O60563 O60563 574 590 CCNT1 Cyclin-T1 yes yes 3 1.8373E-58 122.29 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 36689000 8079200 6472600 7966600 3703700 4075400 6391400 6167 732 6260 27345;27346;27347;27348;27349;27350;27351 18043;18044;18045;18046;18047;18048;18049 18047 7 RGPSRYGPQYGHPPPPPPPPEYGPHADSPVLMVYGLDQSK GPPVGGHRRGPSRYGP VYGLDQSKMNCDRVFN R R G S K M 1 2 0 2 0 2 1 5 2 0 2 1 1 0 12 3 0 0 4 2 0 40 2 4337.1116 P14866;A6NIT8 P14866 354 393 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 5 3.9269E-07 34.503 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 53994000 0 0 21965000 23079000 8949900 0 6168 838 6261 27352;27353;27354 18050;18051 18051 2 RGSLPAEASCTT WNGSLRLKRGSLPAEA PAEASCTT________ K R G T T - 2 1 0 0 1 0 1 1 0 0 1 0 0 0 1 2 2 0 0 0 0 12 1 1248.5768 Q8N3V7-2 Q8N3V7-2 892 903 SYNPO Synaptopodin yes yes 2 0.0027226 94.122 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 15656000 1930500 1714100 3445100 969780 1874800 5721700 6169 1297 6262 27355;27356;27357;27358;27359;27360 18052;18053;18054 18052 2 RGSLPDTQPSQGPSTPK QSFLPCLRRGSLPDTQ SQGPSTPKGERASSPC R R G P K G 0 1 0 1 0 2 0 2 0 0 1 1 0 0 4 3 2 0 0 0 0 17 1 1751.8802 H9KV46;Q86Y91;Q86Y91-2;Q86Y91-3;Q86Y91-4 H9KV46 663 679 KIF18B Kinesin-like protein KIF18B yes no 3 0.00034095 72.433 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 1 1 1 17450000 2655500 2778200 1379900 857410 3030700 6748400 6170 675 6263 27361;27362;27363;27364;27365;27366;27367 18055;18056;18057;18058 18056 4 RGSPAPANPGRAPVASK LRSATASRRGSPAPAN GRAPVASKGAPRRANG R R G S K G 4 2 1 0 0 0 0 2 0 0 0 1 0 0 4 2 0 0 0 1 0 17 2 1631.8856 G3XAA9;E9PJN1;O75676-2;O75676 G3XAA9 495 511 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 yes no 3 0.0051449 58.461 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1728500 295330 308000 0 0 255900 869300 6171 448 6264 27368;27369;27370;27371 18059 18059 1 RGSYRGGSISVQVNSIK RHEKTKKKRGSYRGGS SVQVNSIKFDSE____ K R G I K F 0 2 1 0 0 1 0 3 0 2 0 1 0 0 0 4 0 0 1 2 0 17 2 1806.97 Q14978;Q14978-3;Q14978-2 Q14978 679 695 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 4 0.0035595 49.223 By matching By matching By matching By matching By MS/MS By matching 1 6117800 0 0 0 0 6117800 0 6172 1120 6265 27372 18060 18060 1 RGVITDQNSDGYCQTGTMSR TSRMYYSRRGVITDQN CQTGTMSRHQNQNTIQ R R G S R H 0 2 1 2 1 2 0 3 0 1 0 0 1 0 0 2 3 0 1 1 0 20 1 2244.9852 P15924;P15924-2 P15924 45 64 DSP Desmoplakin yes no 3 0.00072893 52.451 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2289600 0 486130 658150 0 0 1145300 6173 840 6266 27373;27374;27375 18061;18062 18061 2 RGYQLEPDLSEEVSAR IRFENESRRGYQLEPD LSEEVSARLRLGSGSN R R G A R L 1 2 0 1 0 1 3 1 0 0 2 0 0 0 1 2 0 0 1 1 0 16 1 1847.9014 B4DQ42;Q9HC62;E7ENF4;H7C1A0 B4DQ42 303 318 SENP2 Sentrin-specific protease 2 yes no 3 0.0015302 65.105 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 14634000 0 5645800 0 0 0 8988600 6174 115 6267 27376;27377 18063;18064 18063 1 RHATAEEVEEEER IDAEPPAKRHATAEEV EEVEEEERDRIPGPVC K R H E R D 2 2 0 0 0 0 6 0 1 0 0 0 0 0 0 0 1 0 0 1 0 13 1 1583.7176 Q8TDN6 Q8TDN6 32 44 BRIX1 Ribosome biogenesis protein BRX1 homolog yes yes 3 7.1367E-06 98.943 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 11551000 1397900 1490600 1528100 1039600 3141900 2952900 6175 1337 6268 27378;27379;27380;27381;27382;27383 18065;18066;18067;18068;18069;18070 18070 6 RHDSDTFPELK KPNEQTSKRHDSDTFP SDTFPELKLTNAPGSF K R H L K L 0 1 0 2 0 0 1 0 1 0 1 1 0 1 1 1 1 0 0 0 0 11 1 1343.647 E9PFZ0;P38398-4;P38398-2;P38398;E9PFC7;E7EP70;F8W8H7;E7EMP0 E9PFZ0 644 654 BRCA1 Breast cancer type 1 susceptibility protein yes no 3 0.0021408 78.548 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 2 1 13299000 0 1916700 2587600 1075700 4104000 3614500 6176 426 6269 27384;27385;27386;27387;27388;27389 18071;18072;18073 18071 3 RHDVCPAPSSSASHGPF AASTAWFRRHDVCPAP SSASHGPF________ R R H P F - 2 1 0 1 1 0 0 1 2 0 0 0 0 1 3 4 0 0 0 1 0 17 1 1807.806 H7C0N4 H7C0N4 164 180 SF1 yes yes 3;4 0.00079001 80.102 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 4 2 1 2 3 2 59007000 11173000 8664400 4704300 4817300 10209000 19439000 6177 664 6270 27390;27391;27392;27393;27394;27395;27396;27397;27398;27399;27400;27401;27402;27403 18074;18075;18076;18077;18078;18079;18080;18081;18082;18083 18074 10 RHEVERAPEAAAAER TQLVERGRRHEVERAP PEAAAAEREEVAYDPE R R H E R E 5 3 0 0 0 0 4 0 1 0 0 0 0 0 1 0 0 0 0 1 0 15 2 1690.8499 Q9BTC0 Q9BTC0 1407 1421 DIDO1 Death-inducer obliterator 1 yes yes 4 0.0024797 65.219 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 3648300 0 0 777010 396540 743750 1731000 6178 1447 6271 27404;27405;27406;27407 18084;18085 18084 2 RHIPEAHQATLLDGK AKASITSKRHIPEAHQ QATLLDGKQGKVIMPL K R H G K Q 2 1 0 1 0 1 1 1 2 1 2 1 0 0 1 0 1 0 0 0 0 15 1 1684.9009 Q8NFC6 Q8NFC6 1364 1378 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 4 0.0017641 57.288 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2374800 0 875460 0 0 0 1499300 6179 1325 6272 27408;27409 18086;18087 18086 1 RHMDGMYGPPAK YPQQPNYKRHMDGMYG GMYGPPAKRHEGDMYN K R H A K R 1 1 0 1 0 0 0 2 1 0 0 1 2 0 2 0 0 0 1 0 0 12 1 1358.6224 Q8NFD5;Q8NFD5-2;Q8NFD5-3;G3XAA0;H0Y7H8;Q8NFD5-4 Q8NFD5 1361 1372 ARID1B AT-rich interactive domain-containing protein 1B yes no 3 0.015662 47.429 By matching By matching By matching By matching By matching By MS/MS 1 1 1182600 0 0 0 0 452580 729990 6180 1326 6273 27410;27411 18088 18088 1 RHPEYAVSVLLR SFLYEYSRRHPEYAVS YAVSVLLRLAKEYEAT R R H L R L 1 2 0 0 0 0 1 0 1 0 2 0 0 0 1 1 0 0 1 2 0 12 1 1438.8045 CON__P02769 CON__P02769 360 371 yes yes 3 1.8479E-18 115.34 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 59198000 0 0 13756000 3246800 5201000 36994000 + 6181 294 6274 27412;27413;27414;27415 18089;18090;18091;18092;18093 18093 5 RHSNVVILTTSNITEK LTQIDQIKRHSNVVIL TTSNITEKIDVAFVDR K R H E K I 0 1 2 0 0 0 1 0 1 2 1 1 0 0 0 2 3 0 0 2 0 16 1 1810.9901 Q15645 Q15645 289 304 TRIP13 Pachytene checkpoint protein 2 homolog yes yes 3 0.018519 60.949 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 6182 1142 6275 27416 18094 18094 1 RHTGEKPYVCDTCGK STLTYHVRRHTGEKPY YVCDTCGKAFAVSSSL R R H G K A 0 1 0 1 2 0 1 2 1 0 0 2 0 0 1 0 2 0 1 1 0 15 2 1806.8141 Q9NPC7-3;Q9NPC7-2;Q9NPC7 Q9NPC7-3 436 450 MYNN Myoneurin yes no 4 0.0039108 54.402 By matching By matching By MS/MS By matching By matching By matching 1 623480 0 0 623480 0 0 0 6183 1524 6276 27417 18095 18095 1 RHTQAGEGTSLETKTPR DSKITPQKRHTQAGEG SLETKTPRTPKRQGTQ K R H P R T 1 2 0 0 0 1 2 2 1 0 1 1 0 0 1 1 4 0 0 0 0 17 2 1867.95 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 1177 1193 TICRR Treslin yes no 4 0.010235 42.226 By matching By matching By matching By matching By matching By MS/MS 1 1016200 0 0 0 0 0 1016200 6184 1249 6277 27418 18096 18096 1 RHVCIQSSLAK FIRNLCQKRHVCIQSS CIQSSLAKVSSKKVNE K R H A K V 1 1 0 0 1 1 0 0 1 1 1 1 0 0 0 2 0 0 0 1 0 11 1 1297.6925 Q8N5C6;Q8N5C6-2 Q8N5C6 394 404 SRBD1 S1 RNA-binding domain-containing protein 1 yes no 2;3 0.00026985 95.618 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 17923000 1429400 6379900 7013900 3099800 0 0 6185 1302 6278 27419;27420;27421;27422;27423 18097;18098;18099;18100;18101 18097 4 RIAACQEQILR QTFYKFMKRIAACQEQ ACQEQILRYSWSGEPL K R I L R Y 2 2 0 0 1 2 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 11 1 1356.7296 Q9BRP1 Q9BRP1 256 266 PDCD2L Programmed cell death protein 2-like yes yes 3 3.1724E-20 120.06 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 16481000 1977700 1840200 1107800 1703400 5163000 4689100 6186 1442 6279 27424;27425;27426;27427;27428;27429 18102;18103;18104;18105;18106;18107;18108 18106 7 RIAELSEDDQK VANKCDVKRIAELSED ELSEDDQKIFTDLQSE K R I Q K I 1 1 0 2 0 1 2 0 0 1 1 1 0 0 0 1 0 0 0 0 0 11 1 1302.6416 Q9BZE4;B7Z7A3;B4DY13 Q9BZE4 295 305 GTPBP4 Nucleolar GTP-binding protein 1 yes no 2;3 0.00090953 90.434 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 3 1 1 2 7075000 537470 1046700 1307700 298720 707090 3177200 6187 1471 6280 27430;27431;27432;27433;27434;27435;27436;27437;27438 18109;18110;18111;18112;18113;18114 18114 6 RIAVHHNSVEDVPEEK MKNKVENKRIAVHHNS VEDVPEEKENEIKPDR K R I E K E 1 1 1 1 0 0 3 0 2 1 0 1 0 0 1 1 0 0 0 3 0 16 1 1857.9333 Q9UKY1 Q9UKY1 195 210 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 3;4 0.0013297 67.326 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 3 1 2 2 16333000 0 3374400 4139000 1332500 2886700 4600600 6188 1604 6281 27439;27440;27441;27442;27443;27444;27445;27446;27447;27448 18115;18116;18117;18118;18119;18120;18121;18122 18122 8 RIEELNKTANGNVEAK SSNPYLVRRIEELNKT ANGNVEAKVVCLFRRR R R I A K V 2 1 3 0 0 0 3 1 0 1 1 2 0 0 0 0 1 0 0 1 0 16 2 1784.9381 Q13330;Q13330-3;E7ESY4;Q13330-2;H7C3F3;O94776 O94776 26 41 MTA1;MTA2 Metastasis-associated protein MTA1;Metastasis-associated protein MTA2 no no 3 0.0030854 80.508 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 22123000 0 6519400 10023000 377200 0 5203300 6189 754;1078 6282 27449;27450;27451;27452 18123 18123 1 RIEFAEQINK MNALFEGRRIEFAEQI EFAEQINKMEARPRRQ R R I N K M 1 1 1 0 0 1 2 0 0 2 0 1 0 1 0 0 0 0 0 0 0 10 1 1246.667 Q9H307;Q9H307-2 Q9H307 271 280 PNN Pinin yes no 3 0.013944 58.63 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 4897400 529310 310730 0 285460 1482100 2289900 6190 1486 6283 27453;27454;27455;27456;27457 18124;18125 18124 2 RIEPAEELNSNDMK RSLRTSAKRIEPAEEL ELNSNDMKTNKEEHKL K R I M K T 1 1 2 1 0 0 3 0 0 1 1 1 1 0 1 1 0 0 0 0 0 14 1 1644.7777 P46013;F5H4V4;P46013-2 P46013 3058 3071 MKI67 Antigen KI-67 no no 2;3 0.00066948 86.548 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 3 2 5 4 280390000 17481000 37921000 49828000 16085000 69971000 89100000 6191 919;920 6284;6285 27458;27459;27460;27461;27462;27463;27464;27465;27466;27467;27468;27469;27470;27471;27472;27473;27474;27475;27476;27477 18126;18127;18128;18129;18130;18131;18132;18133;18134;18135;18136 18126 107 11 RIEPAEELNSNDMKTNK RSLRTSAKRIEPAEEL SNDMKTNKEEHKLQDS K R I N K E 1 1 3 1 0 0 3 0 0 1 1 2 1 0 1 1 1 0 0 0 0 17 2 1987.9633 P46013;F5H4V4;P46013-2 P46013 3058 3074 MKI67 Antigen KI-67 no no 3 3.0884E-31 108.25 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 17631000 2031600 3930300 3359400 2814400 2376700 3118300 6192 919;920 6286 27478;27479;27480;27481;27482;27483 18137;18138;18139;18140;18141;18142 18139 6 RIFHTVTTTDDPVIRK EKPLRSIKRIFHTVTT TDDPVIRKLAKTQGNV K R I R K L 0 2 0 2 0 0 0 0 1 2 0 1 0 1 1 0 4 0 0 2 0 16 2 1898.0374 B0QYA5;B4DVY1;A8MWD3;O15371 B0QYA5 222 237 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 4 0.0052378 48.391 By matching By matching By matching By matching By matching By MS/MS 1 1 3108900 0 0 0 780880 0 2328000 6193 50 6287 27484;27485 18143 18143 1 RIGAPSADQTLTNMNR GKNLAGNKRIGAPSAD QTLTNMNRALALNCDA K R I N R A 2 2 2 1 0 1 0 1 0 1 1 0 1 0 1 1 2 0 0 0 0 16 1 1743.8686 Q96PU4 Q96PU4 520 535 UHRF2 E3 ubiquitin-protein ligase UHRF2 yes yes 3 2.5614E-18 102.63 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 2 1 14504000 1728600 0 2635400 0 296110 9843900 6194 1411 6288 27486;27487;27488;27489;27490 18144;18145;18146;18147 18146 4 RIGVPSATEIIK QKAGIKFKRIGVPSAT PSATEIIKASSKDAIR K R I I K A 1 1 0 0 0 0 1 1 0 3 0 1 0 0 1 1 1 0 0 1 0 12 1 1282.7609 Q9NR30;Q9NR30-2 Q9NR30 562 573 DDX21 Nucleolar RNA helicase 2 yes no 2;3 1.1777E-65 142.76 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 2 48788000 6044400 1573300 2894900 0 2723000 35552000 6195 1534 6289 27491;27492;27493;27494;27495;27496 18148;18149;18150;18151;18152 18152 3 RIGVPSATEIIKASSK QKAGIKFKRIGVPSAT EIIKASSKDAIRLLDS K R I S K D 2 1 0 0 0 0 1 1 0 3 0 2 0 0 1 3 1 0 0 1 0 16 2 1655.957 Q9NR30;Q9NR30-2 Q9NR30 562 577 DDX21 Nucleolar RNA helicase 2 yes no 3 2.9715E-37 116.96 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 27540000 12650000 6766300 0 2764200 0 5359400 6196 1534 6290 27497;27498;27499;27500 18153;18154;18155;18156 18154 3 RIHISQEDNVANK RRRGRPPKRIHISQED QEDNVANKQTLASYRS K R I N K Q 1 1 2 1 0 1 1 0 1 2 0 1 0 0 0 1 0 0 0 1 0 13 1 1522.7852 Q9NRL2-2;Q9NRL2 Q9NRL2-2 282 294 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A yes no 3 0.0002922 92.906 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 5612900 0 924810 748220 372770 1437100 2130000 6197 1536 6291 27501;27502;27503;27504;27505 18157;18158;18159;18160 18157 4 RIHQLEQQVEK EDTMHQRKRIHQLEQQ QLEQQVEKLRKKLKTA K R I E K L 0 1 0 0 0 3 2 0 1 1 1 1 0 0 0 0 0 0 0 1 0 11 1 1406.763 Q9NVV9 Q9NVV9 148 158 THAP1 THAP domain-containing protein 1 yes yes 3 0.0093167 57.149 By matching By matching By matching By matching By matching By MS/MS 1 977300 0 0 0 0 0 977300 6198 1552 6292 27506 18161 18161 1 RILDEIEEHNIK KERERLKKRILDEIEE EIEEHNIKIYHLPDAE K R I I K I 0 1 1 1 0 0 3 0 1 3 1 1 0 0 0 0 0 0 0 0 0 12 1 1507.7995 C9J2Q4;H7C2Y0;B5MCX3;Q15019;Q15019-2 C9J2Q4 158 169 SEPT2 Septin-2 yes no 3 0.0063941 57.034 By matching By matching By matching By matching By matching By MS/MS 1 1 3511700 0 0 0 658130 0 2853600 6199 172 6293 27507;27508 18162 18162 1 RILELDQFKGQQGQK ELDNPGAKRILELDQF FKGQQGQKRFQDMMGH K R I Q K R 0 1 0 1 0 4 1 2 0 1 2 2 0 1 0 0 0 0 0 0 0 15 2 1786.969 B1AHC9;B1AHC8;P12956;B1AHC7 B1AHC9 65 79 XRCC6 X-ray repair cross-complementing protein 6 yes no 3 0.0045249 68.751 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 17539000 0 0 5031500 3826000 2922000 5759300 6200 60 6294 27509;27510;27511;27512 18163;18164 18164 2 RILELSGSSSEDSEK EIEEDKARRILELSGS SSSEDSEKVIAGLYQR R R I E K V 0 1 0 1 0 0 3 1 0 1 2 1 0 0 0 5 0 0 0 0 0 15 1 1635.7952 P78527;E7EUY0;P78527-2 P78527 3358 3372 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2;3 0.00026624 83.54 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 2 2 12843000 881980 2991500 252160 727420 2550500 5439400 6201 1012 6295 27513;27514;27515;27516;27517;27518;27519;27520;27521 18165;18166;18167;18168;18169;18170;18171;18172 18166 8 RILFSIVHDK IQNVHASKRILFSIVH LFSIVHDKSEKWDAFI K R I D K S 0 1 0 1 0 0 0 0 1 2 1 1 0 1 0 1 0 0 0 1 0 10 1 1226.7135 Q9UHL9-2;Q9UHL9;E9PFE2;Q9UHL9-3 Q9UHL9-2 325 334 GTF2IRD1 General transcription factor II-I repeat domain-containing protein 1 yes no 3 2.4473E-09 115.91 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 6526200 0 0 0 551850 0 5974300 6202 427 6296 27522;27523;27524 18173;18174;18175 18174 3 RILQSLEK GVTSSTARRILQSLEK RILQSLEKMSSPLADA R R I E K M 0 1 0 0 0 1 1 0 0 1 2 1 0 0 0 1 0 0 0 0 0 8 1 985.59203 P49790;F6QR24;Q4LE47 P49790 310 317 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 2 0.0002861 115.49 By matching By matching By matching By MS/MS By matching By matching 1 1702400 0 0 0 1702400 0 0 6203 531 6297 27525 18176 18176 1 RILVLNGGYRGNEGTLESINEK TVIPAPGKRILVLNGG TLESINEKTFSATIVI K R I E K T 0 2 3 0 0 0 3 4 0 2 3 1 0 0 0 1 1 0 1 1 0 22 2 2431.2819 B4DX32;O60870;F5GXB3 B4DX32 342 363 KIN DNA/RNA-binding protein KIN17 yes no 3;4 5.8427E-06 66.777 By matching By matching By matching By MS/MS By matching By matching 1 2 120500000 0 2491300 0 118010000 0 0 6204 136 6298 27526;27527;27528 18177;18178 18177 2 RIQDPTEDAEAEDTPRK GKKRNHTKRIQDPTED EAEDTPRKRLRTDKHS K R I R K R 2 2 0 3 0 1 3 0 0 1 0 1 0 0 2 0 2 0 0 0 0 17 2 1969.9341 O96028-5;O96028-3;O96028;H0Y9L4 O96028-5 531 547 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 3;4 3.4985E-13 99.392 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 2 2 42998000 9482600 8125100 8559500 3971500 3686900 9172500 6205 779 6299 27529;27530;27531;27532;27533;27534;27535;27536;27537;27538;27539;27540;27541;27542 18179;18180;18181;18182;18183;18184;18185;18186;18187;18188;18189;18190;18191;18192 18181 13 RISEQFTAMFR TAIQELFKRISEQFTA EQFTAMFRRKAFLHWY K R I F R R 1 2 0 0 0 1 1 0 0 1 0 0 1 2 0 1 1 0 0 0 0 11 1 1384.6922 P68371;E7EWR1;Q5ST81;F5H8C9;Q9BVA1;Q13885;B4DFH6;B4DJ43;P04350;A8K854;Q13509;F8VUJ7;Q5JP53;F8VYX6;F8VW92;P07437;E9PBJ4 P68371 380 390 TUBB4B;TUBB;TUBB2B;TUBB2A;TUBB4A;TUBB3 Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta chain no no 3 0.0033858 83.226 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 6206 1007;542 6300 27543 18193 18193 61 1 RISGLIYEETRGVLK LARRGGVKRISGLIYE EETRGVLKVFLENVIR K R I L K V 0 2 0 0 0 0 2 2 0 2 2 1 0 0 0 1 1 0 1 1 0 15 2 1732.9836 P62805 P62805 46 60 HIST1H4A Histone H4 yes yes 3 0.0094771 57.794 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 8159300 6157700 0 0 0 2001500 0 6207 994 6301 27544;27545 18194;18195 18195 2 RISIGGGSCAISGGYGSR LYGLGGSKRISIGGGS ISGGYGSRAGGSYGFG K R I S R A 1 2 0 0 1 0 0 6 0 3 0 0 0 0 0 4 0 0 1 0 0 18 1 1753.853 P02538;CON__P02538;E7EUE8;P04259;CON__P04259;F5H6G5 P02538 69 86 KRT6A;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6B no no 3 1.9001E-05 87.323 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 2 52402000 5759000 6028700 3890800 31385000 5338400 0 + 6208 287;788 6302 27546;27547;27548;27549;27550;27551 18196;18197;18198;18199;18200 18199 5 RISISTSGGSFR LYNLGGSKRISISTSG STSGGSFRNRFGAGAG K R I F R N 0 2 0 0 0 0 0 2 0 2 0 0 0 1 0 4 1 0 0 0 0 12 1 1266.668 P13647;CON__P13647;F8VV57 P13647 73 84 KRT5 Keratin, type II cytoskeletal 5 yes no 3 0.0036321 62.162 By matching By MS/MS By matching By matching By matching By matching 1 1 1 17357000 0 2344600 0 12939000 2073800 0 + 6209 299 6303 27552;27553;27554 18201 18201 1 RISSKSPGHMVILDQTK IKKSEEKKRISSKSPG MVILDQTKGDHCRPSR K R I T K G 0 1 0 1 0 1 0 1 1 2 1 2 1 0 1 3 1 0 0 1 0 17 2 1896.0251 Q9NWH9;A8K5V8 Q9NWH9 548 564 SLTM SAFB-like transcription modulator yes no 4 0.0060075 45.883 By matching By matching By matching By matching By MS/MS By matching 1 1 1 3937700 0 509130 0 323850 3104800 0 6210 1554 6304 27555;27556;27557 18202 18202 1 RITADQALKHPWVCQR MLTINPAKRITADQAL KHPWVCQRSTVASMMH K R I Q R S 2 2 0 1 1 2 0 0 1 1 1 1 0 0 1 0 1 1 0 1 0 16 2 1978.0319 H0Y6G2;Q8WU40;Q13555-10;Q5SWX3;Q13555-3;Q13555-5;Q13555-4;Q13555-7;Q13555-9;Q13555-2;Q13555-8;Q13555;Q13555-6 H0Y6G2 39 54 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma yes no 4 0.011829 43.557 By MS/MS By matching By matching By matching By matching By matching 1 1597300 1597300 0 0 0 0 0 6211 612 6305 27558 18203 18203 1 RITQETFDAVLQEK ________________ FDAVLQEKAKRYHMDA R R I E K A 1 1 0 1 0 2 2 0 0 1 1 1 0 1 0 0 2 0 0 1 0 14 1 1676.8733 Q8IX01-4;Q8IX01-3;Q8IX01 Q8IX01-4 5 18 SUGP2 SURP and G-patch domain-containing protein 2 yes no 3 0.0078624 47.217 By matching By matching By matching By matching By matching By MS/MS 1 7013300 0 0 0 0 0 7013300 6212 1284 6306 27559 18204 18204 1 RKAQAVSEEEEEEEGK LFSKEAPKRKAQAVSE EEEEEEGKSSSPKKKI K R K G K S 2 1 0 0 0 1 7 1 0 0 0 2 0 0 0 1 0 0 0 1 0 16 2 1846.8545 G3V529;Q9GZR7;F5H4J5;Q4V9L5 G3V529 33 48 DDX24 ATP-dependent RNA helicase DDX24 yes no 3 1.4662E-11 100.23 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 4838300 0 837160 1330600 905990 634130 1130400 6213 588 6307 27560;27561;27562;27563;27564 18205 18205 1 RKASGPPVSELITK RKSAGAAKRKASGPPV PVSELITKAVAASKER K R K T K A 1 1 0 0 0 0 1 1 0 1 1 2 0 0 2 2 1 0 0 1 0 14 2 1481.8566 P10412;P16402 P10412 33 46 HIST1H1E;HIST1H1D Histone H1.4;Histone H1.3 yes no 3 5.2509E-20 111.81 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 155720000 42770000 21355000 12348000 13553000 41805000 23889000 6214 818 6308 27565;27566;27567;27568;27569;27570;27571 18206;18207;18208;18209;18210;18211;18212 18212 7 RKATGPPVSELITK AAGAGAAKRKATGPPV PVSELITKAVAASKER K R K T K A 1 1 0 0 0 0 1 1 0 1 1 2 0 0 2 1 2 0 0 1 0 14 2 1495.8722 P16401 P16401 36 49 HIST1H1B Histone H1.5 yes yes 3 1.1802E-19 110.25 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 50919000 18141000 13103000 0 0 19675000 0 6215 842 6309 27572;27573;27574 18213;18214 18213 2 RKAVEAAQLAEDLK SQALELNKRKAVEAAQ AQLAEDLKVQLEHVQT K R K L K V 4 1 0 1 0 1 2 0 0 0 2 2 0 0 0 0 0 0 0 1 0 14 2 1540.8573 O75150-4;H3BP71;O75150;F8W8Z4;F6SYU7;Q6ZN99 O75150-4 761 774 RNF40 E3 ubiquitin-protein ligase BRE1B yes no 3 0.037446 59.709 By matching By matching By matching By matching By matching By MS/MS 1 1 2522300 0 1011800 0 0 0 1510500 6216 634 6310 27575;27576 18215 18215 0 RKEFEDDLVK RQVDIARKRKEFEDDL EFEDDLVKESSSCGKD K R K V K E 0 1 0 2 0 0 2 0 0 0 1 2 0 1 0 0 0 0 0 1 0 10 2 1277.6616 O43148;O43148-2 O43148 59 68 RNMT mRNA cap guanine-N7 methyltransferase yes no 3 4.5651E-34 131.42 By matching By matching By matching By matching By matching By MS/MS 1 1 1 9174100 0 1456500 0 0 2023800 5693900 6217 709 6311 27577;27578;27579 18216 18216 1 RKELSQNTDESGLNDEAIAK NKKMVASKRKELSQNT LNDEAIAKQLQLDEDA K R K A K Q 2 1 2 2 0 1 3 1 0 1 2 2 0 0 0 2 1 0 0 0 0 20 2 2217.0873 P35251-2;P35251 P35251-2 186 205 RFC1 Replication factor C subunit 1 yes no 3;4 0.00055034 62.739 By matching By MS/MS By matching By matching By matching By matching 2 2 2 1 1 1 25918000 5390800 7606200 5162000 1502700 2606600 3649400 6218 896 6312 27580;27581;27582;27583;27584;27585;27586;27587;27588 18217;18218 18218 2 RKGDEVDGVDEVAK PGVKSEGKRKGDEVDG DGVDEVAKKKSKKEKD K R K A K K 1 1 0 3 0 0 2 2 0 0 0 2 0 0 0 0 0 0 0 3 0 14 2 1515.7529 P09874;F8WC10 P09874 208 221 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2;3 3.3554E-29 115.04 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 3 3 2 2 3 1 127450000 17875000 17997000 13380000 13859000 19346000 44991000 6219 815 6313 27589;27590;27591;27592;27593;27594;27595;27596;27597;27598;27599;27600;27601;27602 18219;18220;18221;18222;18223;18224;18225;18226 18224 8 RKGFNEGLWEIDNNPK EKYGKPNKRKGFNEGL WEIDNNPKVKFSSQQA K R K P K V 0 1 3 1 0 0 2 2 0 1 1 2 0 1 1 0 0 1 0 0 0 16 2 1915.9541 O75475;O75475-2 O75475 74 89 PSIP1 PC4 and SFRS1-interacting protein yes no 3;4 0.013904 48.423 By matching By matching By matching By matching By matching By MS/MS 1 1 2 7623600 0 291970 0 576660 0 6755000 6220 741 6314 27603;27604;27605;27606 18227;18228 18228 2 RKGFSEGLWEIENNPTVK EKFGKPNKRKGFSEGL IENNPTVKASGYQSSQ K R K V K A 0 1 2 0 0 0 3 2 0 1 1 2 0 1 1 1 1 1 0 1 0 18 2 2103.0749 P51858;A8K8G0;Q5SZ08;Q5SZ07 P51858 79 96 HDGF Hepatoma-derived growth factor yes no 4 0.0098347 41.323 By matching By matching By matching By MS/MS By matching By matching 1 1 19695000 0 6107300 0 13587000 0 0 6221 954 6315 27607;27608 18229 18229 1 RKGGPGSTLSFVGK AAGPGDPKRKGGPGST STLSFVGKRRGGNKLA K R K G K R 0 1 0 0 0 0 0 4 0 0 1 2 0 1 1 2 1 0 0 1 0 14 2 1389.7728 Q9BQ61 Q9BQ61 105 118 C19orf43 Uncharacterized protein C19orf43 yes yes 3 0.0043294 83.869 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 55661000 3827500 0 8248700 6440800 16093000 21051000 6222 1437 6316 27609;27610;27611;27612;27613 18230;18231;18232;18233 18231 4 RKGVHCVMSLGVPGPATLAK STKVAGAKRKGVHCVM PGPATLAKALLQTHPE K R K A K A 2 1 0 0 1 0 0 3 1 0 2 2 1 0 2 1 1 0 0 3 0 20 2 2077.1289 Q96CP2;I3L1Y9;I3L4I0 Q96CP2 59 78 FLYWCH2 FLYWCH family member 2 yes no 3;4 0.00016742 76.068 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 2 1 109410000 16859000 0 28323000 0 0 64228000 6223 683 6317 27614;27615;27616;27617 18234;18235;18236;18237 18234 4 RKLDAEDVIGSR KAFKQPAKRKLDAEDV AEDVIGSRRQPRAPKE K R K S R R 1 2 0 2 0 0 1 1 0 1 1 1 0 0 0 1 0 0 0 1 0 12 2 1357.7314 P46013;F5H4V4;P46013-2 P46013 2891 2902 MKI67 Antigen KI-67 no no 3 6.7497E-26 119.25 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 9961600 883820 0 1756800 0 1660300 5660700 6224 919;920 6318 27618;27619;27620;27621 18238;18239 18239 2 RKLESLDALEPEEK ILKNKGRKRKLESLDA DALEPEEKAEDCWELQ K R K E K A 1 1 0 1 0 0 4 0 0 0 3 2 0 0 1 1 0 0 0 0 0 14 2 1655.873 Q14807;B7Z265 Q14807 558 571 KIF22 Kinesin-like protein KIF22 yes no 3 0.01306 58.079 By matching By MS/MS By matching By matching By matching By matching 1 1 1 3762700 0 1539800 0 0 422630 1800200 6225 1115 6319 27622;27623;27624 18240 18240 1 RKLLENSTLNSK FTADRHKKRKLLENST ENSTLNSKLLKVNGST K R K S K L 0 1 2 0 0 0 1 0 0 0 3 2 0 0 0 2 1 0 0 0 0 12 2 1401.794 Q6JHV3;H0YMI4;Q9Y6I4;B3KMX7;H0YLB7;H0YKU8;F5H1A6;H0YL81;B4DV65;H0YLG0 Q6JHV3 112 123 USP3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 3 1.849E-07 106.29 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 46509000 2419900 4214100 14210000 7751400 9462500 8450700 6226 628 6320 27625;27626;27627;27628;27629;27630 18241;18242;18243 18241 3 RKLSDDPCPVESK KQTRTNAKRKLSDDPC DPCPVESKKTKRAGEM K R K S K K 0 1 0 2 1 0 1 0 0 0 1 2 0 0 2 2 0 0 0 1 0 13 2 1529.7508 O60244 O60244 614 626 MED14 Mediator of RNA polymerase II transcription subunit 14 yes yes 3 0.0037533 77.894 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 6135300 596440 1015200 1002800 799000 809900 1912000 6227 727 6321 27631;27632;27633;27634;27635;27636 18244 18244 1 RKMEESDEEAVQAK DSSEKAQKRKMEESDE DEEAVQAKVLRPLRSC K R K A K V 2 1 0 1 0 1 4 0 0 0 0 2 1 0 0 1 0 0 0 1 0 14 2 1648.7726 E7EMR1;D4QA03;E9PIL6;Q9Y2K7-3;Q9Y2K7-2;Q9Y2K7 E7EMR1 248 261 KDM2A Lysine-specific demethylase 2A yes no 3 0.0034579 71.531 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 3110000 0 667110 0 564390 586510 1292000 6228 314 6322 27637;27638;27639;27640 18245;18246;18247 18246 2 RKMVNDAEPDTK SKKKKKKKRKMVNDAE NDAEPDTKKAKTENKG K R K T K K 1 1 1 2 0 0 1 0 0 0 0 2 1 0 1 0 1 0 0 1 0 12 2 1402.6875 Q9NVP1 Q9NVP1 115 126 DDX18 ATP-dependent RNA helicase DDX18 yes yes 3 0.013209 65.295 By matching By MS/MS By matching By matching By matching By matching 1 1 2838400 0 868620 1969700 0 0 0 6229 1550 6323 27641;27642 18248 18248 1 RKPDYEPVENTDEAQK SSSRPTARRKPDYEPV ENTDEAQKKFGNVKAI R R K Q K K 1 1 1 2 0 1 3 0 0 0 0 2 0 0 2 0 1 0 1 1 0 16 2 1917.9068 H0Y6A0;C9JZR4;E9PB03;Q9NP61 H0Y6A0 207 222 ARFGAP3 ADP-ribosylation factor GTPase-activating protein 3 yes no 3 1.1863E-06 92.952 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 6340900 0 1025500 1289500 1152100 1159800 1714000 6230 276 6324 27643;27644;27645;27646;27647 18249;18250 18249 2 RKPSTPLSEVIVK PGRPSQQKRKPSTPLS PLSEVIVKNLQLALAN K R K V K N 0 1 0 0 0 0 1 0 0 1 1 2 0 0 2 2 1 0 0 2 0 13 2 1452.8664 Q92547 Q92547 857 869 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 3 0.020693 70.373 By matching By matching By matching By MS/MS By matching By matching 1 0 0 0 0 0 0 0 6231 1351 6325 27648 18251 18251 1 RKSEDGTPAEDGTPAATGGSQPPSMGR PETKKRKKRKSEDGTP SQPPSMGRKKRNRTKA K R K G R K 3 2 0 2 0 1 2 5 0 0 0 1 1 0 4 3 3 0 0 0 0 27 2 2656.2147 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 1104 1130 MYBBP1A Myb-binding protein 1A yes no 4 6.491E-17 81.974 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 18408000 3090500 1454000 2245500 1915000 4798000 4904700 6232 682 6326 27649;27650;27651;27652;27653;27654 18252;18253;18254;18255 18253 4 RKSNEMITNLGK DNYIAQGKRKSNEMIT EMITNLGKKQKTDVST K R K G K K 0 1 2 0 0 0 1 1 0 1 1 2 1 0 0 1 1 0 0 0 0 12 2 1389.7398 Q7Z2T5 Q7Z2T5 610 621 TRMT1L TRMT1-like protein yes yes 3 0.009677 71.888 By matching By matching By matching By MS/MS By matching By matching 1 5863800 0 0 0 5863800 0 0 6233 1248 6327 27655 18256 18256 1 RKSPGVAAAVAEDGGLK ________________ VAEDGGLKKCKISSYC K R K L K K 4 1 0 1 0 0 1 3 0 0 1 2 0 0 1 1 0 0 0 2 0 17 2 1624.8897 E9PQV9;Q9BTE7;E9PLH8;E9PM78;H0YD80;E9PLS2;E9PM04 E9PQV9 7 23 DCUN1D5 DCN1-like protein 5 yes no 3 0.010463 50.831 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 5670600 0 1127300 1278200 903780 378950 1982400 6234 468 6328 27656;27657;27658;27659;27660 18257;18258 18258 2 RLAADGRGLQTVHINENFAK GYTIPLDKRLAADGRG HINENFAKLAEALYIA K R L A K L 3 2 2 1 0 1 1 2 1 1 2 1 0 1 0 0 1 0 0 1 0 20 2 2209.1716 Q13573;G3V3A4;G3V4X8 Q13573 267 286 SNW1 SNW domain-containing protein 1 yes no 4;5 0.0060981 43.752 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 2 1 2 91521000 15522000 0 39404000 5878600 17627000 13089000 6235 583 6329 27661;27662;27663;27664;27665;27666;27667 18259;18260;18261;18262 18259 3 RLAETQEEISAEVAAK RRTEVAKKRLAETQEE ISAEVAAKAERVHELN K R L A K A 4 1 0 0 0 1 4 0 0 1 1 1 0 0 0 1 1 0 0 1 0 16 1 1743.9003 B7Z500;Q9Y383-2;Q9Y383;B7Z4Q3;C9JWT3 B7Z500 104 119 LUC7L2;C7orf55 Putative RNA-binding protein Luc7-like 2;UPF0562 protein C7orf55 yes no 3 3.5721E-07 91.14 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 10605000 0 1752400 4541600 0 0 4311000 6236 186 6330 27668;27669;27670 18263;18264;18265 18264 3 RLAGGDWFTSR AHFVPLVKRLAGGDWF GGDWFTSRTSACGLFS K R L S R T 1 2 0 1 0 0 0 2 0 0 1 0 0 1 0 1 1 1 0 0 0 11 1 1264.6313 F5H3X9;B4DDF7;P30153 F5H3X9 79 89 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 3 0.0082608 58.511 By matching By matching By matching By matching By matching By MS/MS 1 577860 0 0 0 0 0 577860 6237 81 6331 27671 18266 18266 1 RLAGTSGSDKGLSGK ________________ SDKGLSGKRTKTENSG K R L G K R 1 1 0 1 0 0 0 4 0 0 2 2 0 0 0 3 1 0 0 0 0 15 2 1432.7634 Q9P016;Q9P016-2;E9PPQ6 Q9P016 7 21 THYN1 Thymocyte nuclear protein 1 yes no 3 0.0026418 77.24 By matching By MS/MS By matching By matching By matching By matching 1 851930 0 851930 0 0 0 0 6238 1570 6332 27672 18267 18267 1 RLAIKLPDDQIPK AGNLNTYKRLAIKLPD LPDDQIPKTNCNVAVI K R L P K T 1 1 0 2 0 1 0 0 0 2 2 2 0 0 2 0 0 0 0 0 0 13 2 1505.893 Q01813;H0Y3P8;Q5VSR7;B1APP6 Q01813 396 408 PFKP 6-phosphofructokinase type C yes no 3 5.3761E-15 109.95 By matching By matching By matching By matching By matching By MS/MS 1 5278300 0 0 0 0 0 5278300 6239 1031 6333 27673 18268 18268 1 RLASMATLLAR FAFDLDAKRLASMATL SMATLLARAGVSCCEL K R L A R A 3 2 0 0 0 0 0 0 0 0 3 0 1 0 0 1 1 0 0 0 0 11 1 1201.6965 C9JJU9;Q96P11-2;G3V0G9;Q96P11;Q96P11-4 C9JJU9 225 235 NSUN5 Putative methyltransferase NSUN5 yes no 3 5.9165E-05 103.91 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 15912000 0 6087200 0 0 0 9824400 6240 255 6334 27674;27675;27676 18269;18270;18271;18272 18269 4 RLCENIAGHLK VLNEEQRKRLCENIAG ENIAGHLKDAQIFIQK K R L L K D 1 1 1 0 1 0 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 11 1 1309.6925 P04040 P04040 458 468 CAT Catalase yes yes 3 0.0022783 77.062 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 3480100 0 701240 997010 1095200 0 686690 6241 785 6335 27677;27678;27679;27680 18273;18274;18275 18273 3 RLEEEEAAAEK RAQEEQAKRLEEEEAA EEEAAAEKEDRGRPYT K R L E K E 3 1 0 0 0 0 5 0 0 0 1 1 0 0 0 0 0 0 0 0 0 11 1 1273.615 Q5T280;E7ESY7 Q5T280 56 66 C9orf114 Uncharacterized protein C9orf114 yes no 3 0.001072 89.189 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 4570600 511810 1049300 1721200 0 515830 772530 6242 1189 6336 27681;27682;27683;27684;27685 18276;18277;18278;18279 18276 4 RLEEEEAAAEKEDR RAQEEQAKRLEEEEAA AAAEKEDRGRPYTLSV K R L D R G 3 2 0 1 0 0 6 0 0 0 1 1 0 0 0 0 0 0 0 0 0 14 2 1673.7857 Q5T280;E7ESY7 Q5T280 56 69 C9orf114 Uncharacterized protein C9orf114 yes no 3 2.9669E-07 97.45 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 25727000 2331300 7493700 4949800 1227200 2840700 6884100 6243 1189 6337 27686;27687;27688;27689;27690;27691 18280;18281;18282;18283;18284;18285 18283 6 RLEINRGHMTTEAK DRIESLEKRLEINRGH GHMTTEAKRAAKMEKK K R L A K R 1 2 1 0 0 0 2 1 1 1 1 1 1 0 0 0 2 0 0 0 0 14 2 1654.8573 Q99459 Q99459 695 708 CDC5L Cell division cycle 5-like protein yes yes 4 0.0036175 58.32 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 5314400 0 0 877630 612190 2295600 1528900 6244 1423 6338 27692;27693;27694;27695 18286 18286 1 RLELDDNLDTERPVQK AGSLSRKKRLELDDNL DTERPVQKRARSGPQP K R L Q K R 0 2 1 3 0 1 2 0 0 0 3 1 0 0 1 0 1 0 0 1 0 16 2 1939.9963 B0QYQ2;Q96RU7 B0QYQ2 18 33 TRIB3 Tribbles homolog 3 yes no 3;4 0.0040432 57.148 By MS/MS By matching By matching By MS/MS By matching By matching 2 1 23640000 20615000 0 0 3024600 0 0 6245 57 6339 27696;27697;27698 18287;18288;18289 18289 3 RLETPEPGQQGLQAAAR LRAGPSWKRLETPEPG QGLQAAARSAKSALGA K R L A R S 3 2 0 0 0 3 2 2 0 0 2 0 0 0 2 0 1 0 0 0 0 17 1 1820.9493 I3L476;Q9BSJ6-2;I3L1U3;I3L419;Q9BSJ6;I3L156 I3L476 71 87 FAM64A Protein FAM64A yes no 3 5.6356E-45 115.87 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 34148000 2330400 7441600 9533100 307230 1674900 12860000 6246 680 6340 27699;27700;27701;27702;27703;27704 18290;18291;18292;18293;18294 18293 5 RLFVMEESTERK PQDHQESRRLFVMEES MEESTERKVIKGESCS R R L R K V 0 2 0 0 0 0 3 0 0 0 1 1 1 1 0 1 1 0 0 1 0 12 2 1523.7766 Q16600 Q16600 94 105 ZNF239 Zinc finger protein 239 yes yes 3 0.005797 84.169 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2510100 0 0 339800 345760 732250 1092300 6247 1154 6341 27705;27706;27707;27708 18295 18295 1 RLGAAALVPEAQDSQVTSTK LSKVSIIKRLGAAALV DSQVTSTKSKSSAEVK K R L T K S 4 1 0 1 0 2 1 1 0 0 2 1 0 0 1 2 2 0 0 2 0 20 1 2041.0804 Q8N9M1-3;Q8N9M1-2;Q8N9M1 Q8N9M1-3 214 233 C19orf47 Uncharacterized protein C19orf47 yes no 3 0.01092 58.339 By MS/MS By matching By matching By matching By matching By matching 1 1 2458400 1739000 0 0 0 719430 0 6248 1310 6342 27709;27710 18296 18296 0 RLGAAALVPEAQDSQVTSTKSK LSKVSIIKRLGAAALV QVTSTKSKSSAEVKVT K R L S K S 4 1 0 1 0 2 1 1 0 0 2 2 0 0 1 3 2 0 0 2 0 22 2 2256.2074 Q8N9M1-3;Q8N9M1-2;Q8N9M1 Q8N9M1-3 214 235 C19orf47 Uncharacterized protein C19orf47 yes no 4 0.011189 38.379 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 6101800 1759100 1549900 944480 0 0 1848300 6249 1310 6343 27711;27712;27713;27714 18297;18298 18297 2 RLGAGEQDAEEIK LLQKCPEKRLGAGEQD EQDAEEIKVQPFFRTT K R L I K V 2 1 0 1 0 1 3 2 0 1 1 1 0 0 0 0 0 0 0 0 0 13 1 1414.7052 Q6P5Z2 Q6P5Z2 801 813 PKN3 Serine/threonine-protein kinase N3 yes yes 3 0.0058112 54.276 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2002400 0 748230 0 0 0 1254100 6250 1226 6344 27715;27716 18299;18300 18299 2 RLGLPGDEVDNK VGPDFGKKRLGLPGDE PGDEVDNKVKGAAGRT K R L N K V 0 1 1 2 0 0 1 2 0 0 2 1 0 0 1 0 0 0 0 1 0 12 1 1311.6783 P78527;E7EUY0;P78527-2 P78527 2704 2715 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 0.0012128 74.987 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 3478900 0 841300 0 0 687860 1949800 6251 1012 6345 27717;27718;27719 18301;18302;18303 18301 3 RLGLPGDEVDNKVK VGPDFGKKRLGLPGDE DEVDNKVKGAAGRTDL K R L V K G 0 1 1 2 0 0 1 2 0 0 2 2 0 0 1 0 0 0 0 2 0 14 2 1538.8417 P78527;E7EUY0;P78527-2 P78527 2704 2717 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 3.9919E-05 94.45 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 94957000 10547000 17327000 8979500 5667400 6434500 46002000 6252 1012 6346 27720;27721;27722;27723;27724;27725 18304;18305;18306;18307;18308 18306 5 RLGLSCANCHTTTTTLWRR QKRVPSSRRLGLSCAN TTTTLWRRNAEGEPVC R R L R R N 1 3 1 0 2 0 0 1 1 0 3 0 0 0 0 1 5 1 0 0 0 19 2 2303.1375 Q92908-2;Q92908 Q92908-2 293 311 GATA6 Transcription factor GATA-6 yes no 4 0.0018125 52.112 By matching By matching By matching By matching By matching By MS/MS 1 1 6180600 0 0 0 0 1193000 4987600 6253 1363 6347 27726;27727 18309 18309 1 RLGSSYRALPK EIDYASCKRLGSSYRA SSYRALPKSYQQPKCT K R L P K S 1 2 0 0 0 0 0 1 0 0 2 1 0 0 1 2 0 0 1 0 0 11 2 1246.7146 Q96ST3 Q96ST3 553 563 SIN3A Paired amphipathic helix protein Sin3a yes yes 3 0.030218 65.278 By matching By matching By matching By matching By matching By MS/MS 1 1 1 11209000 0 2442400 0 0 3130000 5636400 6254 1420 6348 27728;27729;27730 18310 18310 1 RLIDLHSPSEIVK RFQMRIHKRLIDLHSP HSPSEIVKQITSISIE K R L V K Q 0 1 0 1 0 0 1 0 1 2 2 1 0 0 1 2 0 0 0 1 0 13 1 1505.8566 P60866;P60866-2;G3XAN0 P60866 87 99 RPS20 40S ribosomal protein S20 yes no 3 6.5896E-47 127.79 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 50678000 0 1019700 2513000 0 15462000 31683000 6255 979 6349 27731;27732;27733;27734 18311;18312 18312 2 RLLKEEDMTK ATSGSARKRLLKEEDM LKEEDMTKVEFETSEE K R L T K V 0 1 0 1 0 0 2 0 0 0 2 2 1 0 0 0 1 0 0 0 0 10 2 1261.67 I3L2M0;I3L2Z3;I3L3H2;I3L3F6;P38919 I3L2M0 16 25 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 3 0.014708 87.568 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 3990700 0 603180 707690 390860 987600 1301400 6256 684 6350 27735;27736;27737;27738;27739 18313;18314 18314 2 RLLNTWTNRYPDAK LSSQVPLKRLLNTWTN TNRYPDAKMDPMNIWD K R L A K M 1 2 2 1 0 0 0 0 0 0 2 1 0 0 1 0 2 1 1 0 0 14 2 1746.9166 P78527;E7EUY0;P78527-2 P78527 3159 3172 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 0.0044219 69.456 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 55041000 0 2905200 7170800 6818700 3737300 34409000 6257 1012 6351 27740;27741;27742;27743;27744 18315 18315 1 RLLTSITTK KSKAITPKRLLTSITT LLTSITTKSNIHSSVM K R L T K S 0 1 0 0 0 0 0 0 0 1 2 1 0 0 0 1 3 0 0 0 0 9 1 1031.6339 Q9NQW6;Q9NQW6-2;H7C3S1;H7C1K5;H7C1C2 Q9NQW6 909 917 ANLN Actin-binding protein anillin yes no 2 0.030153 96.665 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 55320000 3501400 0 9222900 4851400 14335000 23409000 6258 1533 6352 27745;27746;27747;27748;27749 18316;18317;18318 18317 3 RLNPEALQAEQLNKQQR IIRRRTRKRLNPEALQ EQLNKQQRGSNEEQVN K R L Q R G 2 2 2 0 0 4 2 0 0 0 3 1 0 0 1 0 0 0 0 0 0 17 2 2035.0923 Q9UHF7;Q9UHF7-3;Q9UHF7-2;E5RFF3;H0YAV4 Q9UHF7 952 968 TRPS1 Zinc finger transcription factor Trps1 yes no 3 0.0089098 52.112 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1615800 226540 0 0 0 448500 940730 6259 1594 6353 27750;27751;27752 18319 18319 1 RLNQSAENGSSLPSAASSCAEAR MSSKKNRKRLNQSAEN ASSCAEARAPSAGSDF K R L A R A 5 2 2 0 1 1 2 1 0 0 2 0 0 0 1 6 0 0 0 0 0 23 1 2362.0931 Q8NB90;Q8NB90-3;Q8NB90-2 Q8NB90 9 31 SPATA5 Spermatogenesis-associated protein 5 yes no 3 0.0030122 41.911 By matching By MS/MS By matching By matching By matching By matching 1 1 1147700 0 639130 0 0 0 508610 6260 1315 6354 27753;27754 18320 18320 1 RLNVWDLSK LASSGTDRRLNVWDLS LNVWDLSKIGEEQSAE R R L S K I 0 1 1 1 0 0 0 0 0 0 2 1 0 0 0 1 0 1 0 1 0 9 1 1129.6244 Q16576;E9PC52;Q16576-2;Q5JP02;Q09028-3;Q09028;Q09028-2;Q09028-4;H0YCT5;H0YF10;H0YDK2;H0YEU5;B4DRT0 Q16576 340 348 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 no no 2 4.832E-11 125.68 By matching By matching By matching By matching By matching By MS/MS 1 54968000 0 0 0 0 0 54968000 6261 1153;1051 6355 27755 18321 18321 1 RLPDAHSDYAR TKSSLDYRRLPDAHSD DAHSDYARYSGSYNDY R R L A R Y 2 2 0 2 0 0 0 0 1 0 1 0 0 0 1 1 0 0 1 0 0 11 1 1299.632 Q96PK6 Q96PK6 637 647 RBM14 RNA-binding protein 14 yes yes 3 0.002584 74.237 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 4669800 799290 0 428640 605920 1331600 1504400 6262 1410 6356 27756;27757;27758;27759;27760 18322;18323 18322 2 RLPFSSLSSLASLHKPER APDLTIEKRLPFSSLS ASLHKPERSVSPESND K R L E R S 1 2 0 0 0 0 1 0 1 0 4 1 0 1 2 5 0 0 0 0 0 18 2 2024.1167 Q8NCN4 Q8NCN4 348 365 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 4 0.00078461 79.332 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 15060000 0 0 5125200 5488300 4446200 0 6263 1318 6357 27761;27762;27763 18324;18325 18325 2 RLPLRAVNLNLR SLCRQFQRRLPLRAVN RAVNLNLRAGPSWKRL R R L L R A 1 3 2 0 0 0 0 0 0 0 4 0 0 0 1 0 0 0 0 1 0 12 2 1433.8943 I3L476;Q9BSJ6-2;I3L1U3;I3L419;Q9BSJ6;I3L156;I3L427 I3L476 53 64 FAM64A Protein FAM64A yes no 3 1.1012E-36 125.68 By matching By matching By matching By matching By matching By MS/MS 1 16969000 0 0 0 0 0 16969000 6264 680 6358 27764 18326 18326 1 RLPNGTELRGR FLGQVLVRRLPNGTEL NGTELRGRIVETEAYL R R L G R I 0 3 1 0 0 0 1 2 0 0 2 0 0 0 1 0 1 0 0 0 0 11 2 1267.7109 G5E9E2;Q5J9I4;P29372-2;P29372;A2IDA3 G5E9E2 93 103 MPG DNA-3-methyladenine glycosylase yes no 3 0.010595 82.831 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 80733000 0 6851600 6195700 0 10497000 57189000 6265 594 6359 27765;27766;27767;27768 18327;18328 18328 2 RLQELEGQIADLKK KLSERRRKRLQELEGQ GQIADLKKKLNEQSKL K R L K K K 1 1 0 1 0 2 2 1 0 1 3 2 0 0 0 0 0 0 0 0 0 14 2 1639.9257 O95239;O95239-2 O95239 601 614 KIF4A Chromosome-associated kinesin KIF4A yes no 3 4.3324E-07 95.755 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 34688000 0 2624600 9432400 0 9412900 13218000 6266 768 6360 27769;27770;27771;27772 18329;18330 18329 2 RLQGLSASDVTEQIIK PRQLFWEKRLQGLSAS DVTEQIIKTMELPKGL K R L I K T 1 1 0 1 0 2 1 1 0 2 2 1 0 0 0 2 1 0 0 1 0 16 1 1756.9683 Q9UBB5 Q9UBB5 286 301 MBD2 Methyl-CpG-binding domain protein 2 yes yes 2;3 1.323E-11 96.208 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 727650000 0 73528000 160680000 21517000 4335200 467590000 6267 1581 6361 27773;27774;27775;27776;27777 18331;18332;18333;18334 18333 4 RLQGQLEQGDDTAAER LKLLEEERRLQGQLEQ GDDTAAERLEKVYEEL R R L E R L 2 2 0 2 0 3 2 2 0 0 2 0 0 0 0 0 1 0 0 0 0 16 1 1785.8606 Q8NE71;Q8NE71-2;H0YGW7 Q8NE71 396 411 ABCF1 ATP-binding cassette sub-family F member 1 yes no 3 0.0013523 56.339 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4290200 790330 890330 0 0 870290 1739300 6268 1321 6362 27778;27779;27780;27781 18335;18336 18335 2 RLQGQLEQGDDTAAERLEK LKLLEEERRLQGQLEQ TAAERLEKVYEELRAT R R L E K V 2 2 0 2 0 3 3 2 0 0 3 1 0 0 0 0 1 0 0 0 0 19 2 2156.0822 Q8NE71;Q8NE71-2;H0YGW7 Q8NE71 396 414 ABCF1 ATP-binding cassette sub-family F member 1 yes no 3;4 2.0083E-05 84.249 By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 2 2 2 1 2 24399000 6014800 3580400 3614000 2512300 2781800 5895200 6269 1321 6363 27782;27783;27784;27785;27786;27787;27788;27789;27790;27791;27792 18337;18338;18339;18340;18341;18342;18343;18344 18338 8 RLQQQQRPEDAEDGAEGGGK MGRRSRGRRLQQQQRP DGAEGGGKRGEAGWEG R R L G K R 2 2 0 2 0 4 3 4 0 0 1 1 0 0 1 0 0 0 0 0 0 20 2 2168.0206 Q08J23-2;Q08J23;D6RAS3 Q08J23-2 9 28 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase yes no 4 3.7356E-05 82.121 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 1 1 5902400 849520 857790 890630 928970 1050700 1324800 6270 1050 6364 27793;27794;27795;27796;27797;27798;27799 18345;18346;18347;18348 18347 4 RLRYHDEADQSALQR EFPGEKSKRLRYHDEA ADQSALQRMTRLRVTW K R L Q R M 2 3 0 2 0 2 1 0 1 0 2 0 0 0 0 1 0 0 1 0 0 15 2 1856.9242 Q12789-3;Q12789;H7BYG6;H3BRD0 Q12789-3 1243 1257 GTF3C1 General transcription factor 3C polypeptide 1 yes no 4 0.039815 36.944 By matching By matching By matching By matching By matching By MS/MS 1 2543600 0 0 0 0 0 2543600 6271 1059 6365 27800 18349 18349 1 RLSSGEDTTELRK DTELDLHKRLSSGEDT EDTTELRKKLSQLQVE K R L R K K 0 2 0 1 0 0 2 1 0 0 2 1 0 0 0 2 2 0 0 0 0 13 2 1490.7689 Q9P2N5 Q9P2N5 912 924 RBM27 RNA-binding protein 27 yes yes 3 6.2642E-15 109.44 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 21454000 2367000 4375100 4830800 1472000 3754300 4655200 6272 1579 6366 27801;27802;27803;27804;27805;27806 18350;18351;18352;18353;18354;18355 18353 6 RLTDSNLKVPEEK SLKDILMKRLTDSNLK NLKVPEEKAAKVATKI K R L E K A 0 1 1 1 0 0 2 0 0 0 2 2 0 0 1 1 1 0 0 1 0 13 2 1527.8257 Q92576-2;Q92576;E7EVH3;E7ER40 Q92576-2 854 866 PHF3 PHD finger protein 3 yes no 3 4.151E-47 130.61 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 71221000 14181000 11833000 17775000 0 11282000 16150000 6273 1353 6367 27807;27808;27809;27810;27811;27812 18356;18357;18358;18359;18360;18361 18358 6 RLTSECVSSNPYSKPSSK EPPKLLGKRLTSECVS PYSKPSSKSFQQCEAG K R L S K S 0 1 1 0 1 0 1 0 0 0 1 2 0 0 2 6 1 0 1 1 0 18 2 2025.979 F8WBE0;Q8IYA6 F8WBE0 102 119 CKAP2L Cytoskeleton-associated protein 2-like yes no 3 3.2327E-12 87.676 By MS/MS By MS/MS By matching By matching By matching By MS/MS 2 1 1 1 1 1 8374800 1792200 790300 1707800 1110100 1417700 1556700 6274 567 6368 27813;27814;27815;27816;27817;27818;27819 18362;18363;18364;18365;18366 18366 4 RLTVNYEQCASGVHGPEGFHYK INRIAQKKRLTVNYEQ GPEGFHYKCKMGQKEY K R L Y K C 1 1 1 0 1 1 2 3 2 0 1 1 0 1 1 1 1 0 2 2 0 22 1 2548.1917 Q05CP4;E9PC80;P19525 Q05CP4 113 134 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase yes no 4 2.7955E-11 88.983 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 14387000 0 0 9295600 0 1016900 4074200 6275 412 6369 27820;27821;27822 18367;18368;18369;18370 18367 4 RLVNSQCEFER ESGGKLTRRLVNSQCE NSQCEFERRKPDGTTT R R L E R R 0 2 1 0 1 1 2 0 0 0 1 0 0 1 0 1 0 0 0 1 0 11 1 1436.683 Q9NPI1;Q9NPI1-2 Q9NPI1 332 342 BRD7 Bromodomain-containing protein 7 yes no 3 0.004856 65.695 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3279500 0 754930 545170 0 709650 1269700 6276 1529 6370 27823;27824;27825;27826 18371 18371 1 RLYGAAGPGAGLLR ETFAPGPRRLYGAAGP GPGAGLLRRATGGSCF R R L L R R 3 2 0 0 0 0 0 4 0 0 3 0 0 0 1 0 0 0 1 0 0 14 1 1370.7783 P13631-2 P13631-2 14 27 RARG Retinoic acid receptor gamma yes yes 3 0.011375 44.426 By matching By matching By matching By matching By matching By MS/MS 1 482050 0 0 0 0 0 482050 6277 832 6371 27827 18372 18372 1 RLYSLALHPNAFK VNTKSLFKRLYSLALH ALHPNAFKRLGASLAF K R L F K R 2 1 1 0 0 0 0 0 1 0 3 1 0 1 1 1 0 0 1 0 0 13 1 1528.8514 P78527;E7EUY0;P78527-2 P78527 1062 1074 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 5.8042E-91 143.31 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 277410000 14788000 6916200 42534000 36564000 12541000 164070000 6278 1012 6372 27828;27829;27830;27831;27832;27833 18373;18374;18375;18376;18377;18378;18379 18379 6 RLYSLALHPNAFKR VNTKSLFKRLYSLALH LHPNAFKRLGASLAFN K R L K R L 2 2 1 0 0 0 0 0 1 0 3 1 0 1 1 1 0 0 1 0 0 14 2 1684.9525 P78527;E7EUY0;P78527-2 P78527 1062 1075 PRKDC DNA-dependent protein kinase catalytic subunit yes no 4 6.6703E-20 107.53 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 5556100 0 0 2470100 0 1086200 1999900 6279 1012 6373 27834;27835;27836 18380;18381;18382 18380 1 RMCRDLLQPR TKLTRLARRMCRDLLQ CRDLLQPRRAARRPYA R R M P R R 0 3 0 1 1 1 0 0 0 0 2 0 1 0 1 0 0 0 0 0 0 10 2 1343.6914 O94776;Q68DB1 O94776 467 476 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 3 9.5344E-09 117.01 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 13028000 0 879670 4207000 0 0 7941200 6280 754 6374 27837;27838;27839 18383;18384 18384 2 RMDHVDFDICTK DSPPSKKKRMDHVDFD VDFDICTKRERNYRSS K R M T K R 0 1 0 3 1 0 0 0 1 1 0 1 1 1 0 0 1 0 0 1 0 12 1 1535.6861 Q96T58 Q96T58 1229 1240 SPEN Msx2-interacting protein yes yes 3 0.040487 37.613 By matching By matching By matching By matching By matching By MS/MS 1 1 1731600 0 0 0 0 1045600 685980 6281 1422 6375 27840;27841 18385 18385 1 RMEELHNQEMQK MRRQEELRRMEELHNQ LHNQEMQKRKEMQLRQ R R M Q K R 0 1 1 0 0 2 3 0 1 0 1 1 2 0 0 0 0 0 0 0 0 12 1 1571.7184 P23246;P23246-2;H0Y9K7 P23246 548 559 SFPQ Splicing factor, proline- and glutamine-rich yes no 3 0.012241 50.354 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 2294800 0 374410 169000 0 1751400 0 6282 865 6376 27842;27843;27844 18386;18387;18388 18386 3 RMEELHNQEVQK MRRQEELRRMEELHNQ LHNQEVQKRKQLELRQ R R M Q K R 0 1 1 0 0 2 3 0 1 0 1 1 1 0 0 0 0 0 0 1 0 12 1 1539.7464 Q15233;F5GYZ3;C9JYS8;H7C367 Q15233 325 336 NONO Non-POU domain-containing octamer-binding protein yes no 3 0.0048958 59.418 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 5369000 0 799340 623750 654240 1151700 2140100 6283 1133 6377 27845;27846;27847;27848;27849 18389;18390;18391;18392 18389 4 RMHVQLSTSR DNTEFQGKRMHVQLST HVQLSTSRLRTAPGMG K R M S R L 0 2 0 0 0 1 0 0 1 0 1 0 1 0 0 2 1 0 0 1 0 10 1 1213.635 Q9BWF3;E9PB51;Q9BQ04;B0LM41 Q9BWF3 140 149 RBM4;RBM4B;RBM14 RNA-binding protein 4;RNA-binding protein 4B;RNA-binding protein 14 yes no 3 0.0080911 67.385 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 14263000 0 2367000 4810600 921120 1290100 4874400 6284 1457 6378 27850;27851;27852;27853;27854 18393;18394;18395 18395 3 RMIETAQVDER ELFLDLCKRMIETAQV ETAQVDERAKGNGSSQ K R M E R A 1 2 0 1 0 1 2 0 0 1 0 0 1 0 0 0 1 0 0 1 0 11 1 1346.6612 Q9UL25 Q9UL25 179 189 RAB21 Ras-related protein Rab-21 yes yes 3 0.025036 46.069 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 3084900 0 749220 826640 150880 0 1358200 6285 1605 6379 27855;27856;27857;27858 18396 18396 1 RMLATDGAAQQAHTTR LHRQLKERRMLATDGA AQQAHTTRSSQRCLAF R R M T R S 4 2 0 1 0 2 0 1 1 0 1 0 1 0 0 0 3 0 0 0 0 16 1 1726.8533 F8VXI8;Q9H9L4;F8VX10;H0YHR2;H0YIQ8 F8VXI8 282 297 KANSL2 KAT8 regulatory NSL complex subunit 2 yes no 3 1.9657E-18 103.67 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2503200 0 307770 0 0 1242900 952550 6286 546 6380 27859;27860;27861 18397 18397 1 RMQALEPYPANESSK NENKMLLKRMQALEPY YPANESSKLVSEKVDD K R M S K L 2 1 1 0 0 1 2 0 0 0 1 1 1 0 2 2 0 0 1 0 0 15 1 1719.825 O43148;O43148-2;F5H2D9 O43148 414 428 RNMT mRNA cap guanine-N7 methyltransferase yes no 2;3 0.001702 57.148 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2 2 35630000 3341600 3805400 4147600 6320700 8303200 9711800 6287 709 6381 27862;27863;27864;27865;27866;27867;27868;27869;27870 18398;18399;18400;18401;18402;18403 18400 4 RMQCECTPLSK NKSHRDIKRMQCECTP CECTPLSKDERAQGEI K R M S K D 0 1 0 0 2 1 1 0 0 0 1 1 1 0 1 1 1 0 0 0 0 11 1 1408.6261 Q9BYW2;F2Z317;H7C3H4;H7BZ93;Q9BYW2-3;Q9BYW2-2;F5H340 Q9BYW2 1496 1506 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 3 0.0060895 62.799 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 2507400 0 695700 604860 0 415670 791150 6288 479 6382 27871;27872;27873;27874 18404;18405 18404 2 RMRPNSNTPVNETATASDSK RNGRGRGKRMRPNSNT TATASDSKGTSNSSKT K R M S K G 2 2 3 1 0 0 1 0 0 0 0 1 1 0 2 3 3 0 0 1 0 20 2 2175.0338 O15014 O15014 374 393 ZNF609 Zinc finger protein 609 yes yes 4 0.00012683 66.201 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 4053300 0 752210 645810 497040 874770 1283500 6289 701 6383 27875;27876;27877;27878;27879 18406;18407;18408;18409 18409 4 RMVCVEYPGVVRDVAK PVELRRERRMVCVEYP GVVRDVAKMLPTLGGE R R M A K M 1 2 0 1 1 0 1 1 0 0 0 1 1 0 1 0 0 0 1 5 0 16 2 1876.9652 Q5T7U1;Q9Y5Q8-2;H7BY84;Q9Y5Q8;Q9Y5Q8-3 Q5T7U1 23 38 GTF3C5 General transcription factor 3C polypeptide 5 yes no 3 0.0068836 66.387 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 11922000 0 3513000 0 1036600 0 7372300 6290 657 6384 27880;27881;27882 18410;18411 18410 2 RNAAPPPSNTEAPPGETR HAVLQWQKRNAAPPPS EAPPGETRTEAGAETR K R N T R T 3 2 2 0 0 0 2 1 0 0 0 0 0 0 5 1 2 0 0 0 0 18 1 1860.9078 G3V529;Q9GZR7;F5H4J5;Q4V9L5;F5GYL3 G3V529 218 235 DDX24 ATP-dependent RNA helicase DDX24 yes no 3 0.00080779 60.093 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 1 1 1 1 9880400 3049200 1152300 1189200 587730 2114300 1787700 6291 588 6385 27883;27884;27885;27886;27887;27888;27889;27890;27891 18412;18413;18414;18415;18416;18417;18418;18419;18420 18413 9 RNAEFLTCNIPTSNASNNMVTTEK PAAIPETKRNAEFLTC NNMVTTEKVENGQEPV K R N E K V 2 1 5 0 1 0 2 0 0 1 1 1 1 1 1 2 4 0 0 1 0 24 1 2711.2643 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 385 408 ADAR Double-stranded RNA-specific adenosine deaminase no no 3 7.6155E-85 119.52 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 1 2 438570000 51914000 103430000 82481000 37560000 14205000 148980000 6292 352;968 6386;6387 27892;27893;27894;27895;27896;27897;27898;27899;27900 18421;18422;18423;18424;18425;18426;18427;18428;18429;18430 18426 36 10 RNAEFLTCNIPTSNASNNMVTTEKVENGQEPVIK PAAIPETKRNAEFLTC NGQEPVIKLENRQEAR K R N I K L 2 1 6 0 1 1 4 1 0 2 1 2 1 1 2 2 4 0 0 3 0 34 2 3804.8411 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 385 418 ADAR Double-stranded RNA-specific adenosine deaminase no no 4 1.8157E-43 81.368 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 43181000 0 0 29881000 6358900 6940700 0 6293 352;968 6388 27901;27902;27903 18431;18432 18431 2 RNAVPITPTLNR LNPWDQVKRNAVPITP PITPTLNREQLSTSEE K R N N R E 1 2 2 0 0 0 0 0 0 1 1 0 0 0 2 0 2 0 0 1 0 12 1 1350.7732 CON__P02663 CON__P02663 114 125 yes yes 3 0.00098854 85.973 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 1 34007000 3467700 9013900 2840300 2835800 5550600 10299000 + 6294 289 6389 27904;27905;27906;27907;27908;27909;27910 18433;18434;18435;18436;18437;18438;18439 18436 7 RNEIDAEPPAK AVQAKKPKRNEIDAEP IDAEPPAKRHATAEEV K R N A K R 2 1 1 1 0 0 2 0 0 1 0 1 0 0 2 0 0 0 0 0 0 11 1 1238.6255 Q8TDN6 Q8TDN6 21 31 BRIX1 Ribosome biogenesis protein BRX1 homolog yes yes 3 0.0026149 73.951 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 6037900 991610 811120 0 523410 1788800 1923000 6295 1337 6390 27911;27912;27913;27914;27915;27916 18440;18441;18442;18443 18443 4 RNFILDQCNVYNSGQR VQIASRTKRNFILDQC NVYNSGQRRKLLLFKT K R N Q R R 0 2 3 1 1 2 0 1 0 1 1 0 0 1 0 1 0 0 1 1 0 16 1 1982.9381 H3BQZ7;Q1KMD3 H3BQZ7 531 546 hCG_2044799;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 3 1.262E-11 96.435 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 14015000 4205600 0 0 1139100 2403100 6267600 6296 640 6391 27917;27918;27919;27920 18444;18445;18446;18447 18447 4 RNFILDQTNVSAAAQR IEIAARKKRNFILDQT NVSAAAQRRKMCLFAG K R N Q R R 3 2 2 1 0 2 0 0 0 1 1 0 0 1 0 1 1 0 0 1 0 16 1 1802.9387 Q00839;B3KX72;Q00839-2 Q00839 575 590 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 3 8.7256E-164 154.81 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 114930000 50116000 575800 41588000 5064400 17043000 539030 6297 1022;1023 6392 27921;27922;27923;27924;27925;27926 18448;18449;18450;18451;18452;18453 18453 5 RNFQEEQINTR FYFYERAKRNFQEEQI QEEQINTRDAKAIAAL K R N T R D 0 2 2 0 0 2 2 0 0 1 0 0 0 1 0 0 1 0 0 0 0 11 1 1433.7011 Q8IXB1;Q8IXB1-2;F8W884 Q8IXB1 756 766 DNAJC10 DnaJ homolog subfamily C member 10 yes no 3 1.0391E-69 144.1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 72967000 7419300 16856000 9406600 5274700 10973000 23038000 6298 1287 6393 27927;27928;27929;27930;27931;27932;27933 18454;18455;18456;18457;18458;18459;18460 18458 7 RNFQEEQINTRDAK FYFYERAKRNFQEEQI QINTRDAKAIAALISE K R N A K A 1 2 2 1 0 2 2 0 0 1 0 1 0 1 0 0 1 0 0 0 0 14 2 1747.8602 Q8IXB1;Q8IXB1-2;F8W884 Q8IXB1 756 769 DNAJC10 DnaJ homolog subfamily C member 10 yes no 3;4 2.5011E-41 121.42 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 2 2 347510000 28152000 2870000 55153000 63061000 58991000 139280000 6299 1287 6394 27934;27935;27936;27937;27938;27939;27940;27941;27942;27943;27944 18461;18462;18463;18464;18465;18466;18467 18462 7 RNFWSVTHPAK AFQKLQTRRNFWSVTH WSVTHPAKAASLSYRR R R N A K A 1 1 1 0 0 0 0 0 1 0 0 1 0 1 1 1 1 1 0 1 0 11 1 1341.6942 Q9P275;Q9P275-2;E9PEW0 Q9P275 1103 1113 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 3 0.0017244 83.182 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 6424500 0 0 0 0 2708400 3716100 6300 1576 6395 27945;27946 18468;18469 18469 2 RNLQQELETQNQK TTIYEEDKRNLQQELE ELETQNQKLQRQFSDK K R N Q K L 0 1 2 0 0 4 2 0 0 0 2 1 0 0 0 0 1 0 0 0 0 13 1 1627.8278 Q02241-2;H7BYN4;Q02241;B4E1K0 Q02241-2 587 599 KIF23 Kinesin-like protein KIF23 yes no 3 1.8703E-155 163.45 By MS/MS By matching By matching By matching By MS/MS By MS/MS 2 1 1 1 1 1 33664000 4391900 8857600 5062000 2678400 4450800 8223600 6301 660 6396 27947;27948;27949;27950;27951;27952;27953 18470;18471;18472;18473 18470 4 RNNEETVMSAR EAVSKFAKRNNEETVM EETVMSARDRYLARQM K R N A R D 1 2 2 0 0 0 2 0 0 0 0 0 1 0 0 1 1 0 0 1 0 11 1 1305.6095 F5H727;Q9H0G5 F5H727 457 467 NSRP1 Nuclear speckle splicing regulatory protein 1 yes no 3 0.0026707 73.435 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 4826600 646230 681100 832430 386450 808150 1472300 6302 526 6397 27954;27955;27956;27957;27958;27959 18474;18475;18476;18477;18478;18479 18477 6 RNQSFCPTVNLDK ________________ CPTVNLDKLWTLVSEQ K R N D K L 0 1 2 1 1 1 0 0 0 0 1 1 0 1 1 1 1 0 0 1 0 13 1 1577.762 E9PJD9;P46776;E9PLL6 E9PJD9 8 20 RPL27A 60S ribosomal protein L27a yes no 2;3 0.0039065 75.589 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 2 2 29544000 6008900 2708600 2172400 2753600 8506000 7394500 6303 447 6398 27960;27961;27962;27963;27964;27965;27966;27967;27968;27969 18480;18481;18482;18483;18484;18485;18486 18482 6 RNRASTAASSALGFSK DACKPLKKRNRASTAA SSALGFSKSSSPSASL K R N S K S 4 2 1 0 0 0 0 1 0 0 1 1 0 1 0 4 1 0 0 0 0 16 2 1622.8489 O96028-5;O96028-3;O96028;H0Y9U6 O96028-5 600 615 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 3;4 0.015291 50.305 By matching By MS/MS By MS/MS By matching By matching By matching 2 1 1 1 1 10030000 0 4492400 2724500 655330 358020 1799400 6304 779 6399 27970;27971;27972;27973;27974;27975 18487;18488 18488 2 RNREEEWDPEYTPK NSNNDFQKRNREEEWD WDPEYTPKSKKYYLHD K R N P K S 0 2 1 1 0 0 4 0 0 0 0 1 0 0 2 0 1 1 1 0 0 14 2 1847.8438 Q9Y2W1 Q9Y2W1 863 876 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.0065817 65.295 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 23308000 531490 2044600 3911400 3983300 5515200 7322200 6305 1639 6400 27976;27977;27978;27979;27980;27981 18489;18490 18489 2 RNRLAPAHVDEQVFLYENAR AANVVSAKRNRLAPAH VFLYENARSGAEAEPE K R N A R S 3 3 2 1 0 1 2 0 1 0 2 0 0 1 1 0 0 0 1 2 0 20 2 2397.2302 O96006 O96006 633 652 ZBED1 Zinc finger BED domain-containing protein 1 yes yes 4 0.0016582 51.225 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 22432000 0 0 8179600 0 0 14252000 6306 778 6401 27982;27983 18491;18492 18491 2 RNSQWVPTLPNSSHHLDAVPCSTTINRNR YLREQKAKRNSQWVPT STTINRNRMGRDKKRT K R N N R M 1 3 4 1 1 1 0 0 2 1 2 0 0 0 3 4 3 1 0 2 0 29 2 3356.6545 Q12824-2;Q12824;G5E975;C9JTA6 Q12824-2 118 146 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes no 5 0.0012585 46.399 By matching By matching By matching By MS/MS By matching By matching 1 7469700 0 0 0 7469700 0 0 6307 592 6402 27984 18493 18493 1 RNTDVPESQQNFHRPVK KVNVKSVKRNTDVPES QNFHRPVKVRKKQIDK K R N V K V 0 2 2 1 0 2 1 0 1 0 0 1 0 1 2 1 1 0 0 2 0 17 2 2051.0297 Q92576-2;Q92576;E7EVH3;E9PE34;B3KP41;D6R9X2 Q92576-2 442 458 PHF3 PHD finger protein 3 yes no 4 0.0010677 80.632 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 16084000 1406900 2263700 2193600 1717800 3411600 5090400 6308 1353 6403 27985;27986;27987;27988;27989;27990 18494;18495;18496;18497;18498 18496 5 RNTNSVPETAPAAIPETK KRERMQIKRNTNSVPE PAAIPETKRNAEFLTC K R N T K R 3 1 2 0 0 0 2 0 0 1 0 1 0 0 3 1 3 0 0 1 0 18 1 1894.9749 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 367 384 ADAR Double-stranded RNA-specific adenosine deaminase no no 2;3 3.0508E-05 86.179 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 264840000 0 62199000 36278000 28460000 59659000 78243000 6309 352;968 6404 27991;27992;27993;27994;27995;27996;27997;27998;27999 18499;18500;18501;18502;18503;18504;18505;18506 18499 8 RNTNSVPETAPAAIPETKR KRERMQIKRNTNSVPE AAIPETKRNAEFLTCN K R N K R N 3 2 2 0 0 0 2 0 0 1 0 1 0 0 3 1 3 0 0 1 0 19 2 2051.076 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 367 385 ADAR Double-stranded RNA-specific adenosine deaminase no no 3;4 0.01219 40.622 By matching By matching By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 2 2 18860000 2885100 4150900 3028700 1885200 2777900 4132000 6310 352;968 6405 28000;28001;28002;28003;28004;28005;28006;28007;28008;28009;28010;28011 18507;18508;18509;18510 18509 4 RNVESGEEELASK LSLINVRKRNVESGEE GEEELASKLDHYKAKA K R N S K L 1 1 1 0 0 0 4 1 0 0 1 1 0 0 0 2 0 0 0 1 0 13 1 1446.6951 Q96HS1-2;Q96HS1 Q96HS1-2 76 88 PGAM5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes no 3 3.0229E-74 137.8 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 5650200 874950 742200 717820 576890 1255500 1482900 6311 1392 6406 28012;28013;28014;28015;28016;28017 18511;18512;18513;18514;18515;18516 18513 6 RNVVVTAIRGK VSYDSEPKRNVVVTAI VVTAIRGKSVCPPTTL K R N G K S 1 2 1 0 0 0 0 1 0 1 0 1 0 0 0 0 1 0 0 3 0 11 2 1211.7462 Q12986 Q12986 1054 1064 NFX1 Transcriptional repressor NF-X1 yes yes 3 0.029298 65.695 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 4937000 0 892280 0 344920 739080 2960700 6312 1066 6407 28018;28019;28020;28021 18517 18517 1 RNYENFIGNAHYRPNDK LSNSMAQKRNYENFIG AHYRPNDKKT______ K R N D K K 1 2 4 1 0 0 1 1 1 1 0 1 0 1 1 0 0 0 2 0 0 17 2 2106.9984 O75362 O75362 1030 1046 ZNF217 Zinc finger protein 217 yes yes 4 0.036394 35.492 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 5990500 568030 0 1155800 1249800 1262600 1754300 6313 740 6408 28022;28023;28024;28025;28026 18518 18518 1 RPAEDMEEEQAFK ETNGEFGKRPAEDMEE MEEEQAFKRSRNTDEM K R P F K R 2 1 0 1 0 1 4 0 0 0 0 1 1 1 1 0 0 0 0 0 0 13 1 1578.6984 P61978-3;P61978-2;B4DFF1;P61978;Q5T6W5;Q5T6W2 P61978-3 22 34 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2;3 8.9133E-75 141.37 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 52084000 4488200 8308900 8578300 3265400 9673100 17770000 6314 984 6409 28027;28028;28029;28030;28031;28032;28033;28034;28035;28036;28037;28038;28039 18519;18520;18521;18522;18523;18524;18525;18526;18527;18528;18529;18530 18521 11 RPAEDMEEEQAFKR ETNGEFGKRPAEDMEE EEEQAFKRSRNTDEMV K R P K R S 2 2 0 1 0 1 4 0 0 0 0 1 1 1 1 0 0 0 0 0 0 14 2 1734.7995 P61978-3;P61978-2;B4DFF1;P61978;Q5T6W5;Q5T6W2 P61978-3 22 35 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 3 0.005522 67.326 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 8776800 490700 0 1048500 747820 1867000 4622800 6315 984 6410 28040;28041;28042;28043;28044 18531 18531 1 RPLDDGVGNQLGALVHQR VYGYGVQKRPLDDGVG LGALVHQRTVITEEFK K R P Q R T 1 2 1 2 0 2 0 3 1 0 3 0 0 0 1 0 0 0 0 2 0 18 1 1944.029 Q96I24;A6NJ37 Q96I24 58 75 FUBP3 Far upstream element-binding protein 3 yes no 3 0.0005806 78.848 By matching By MS/MS By matching By matching By matching By matching 1 1 10073000 0 7594700 0 2478200 0 0 6316 1394 6411 28045;28046 18532 18532 1 RPYAPINANAIK LQPRRAARRPYAPINA PINANAIKAECSIRLP R R P I K A 3 1 2 0 0 0 0 0 0 2 0 1 0 0 2 0 0 0 1 0 0 12 1 1326.7408 O94776;Q68DB1 O94776 481 492 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 2;3 3.7756E-18 118.23 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 1 2 70156000 0 14372000 9435700 0 706370 45642000 6317 754 6412 28047;28048;28049;28050;28051;28052;28053 18533;18534;18535;18536 18536 4 RQAHLCVLASNCDEPMYVK EAAKALDKRQAHLCVL CDEPMYVKLVEALCAE K R Q V K L 2 1 1 1 2 1 1 0 1 0 2 1 1 0 1 1 0 0 1 2 0 19 1 2290.0657 P25398 P25398 45 63 RPS12 40S ribosomal protein S12 yes yes 4 0.00016619 69.979 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 8285400 4695200 0 0 0 2538400 1051800 6318 875 6413 28054;28055;28056 18537;18538;18539;18540;18541 18540 5 RQALVEFENIDSAK YVMMMPFKRQALVEFE FENIDSAKECVTFAAD K R Q A K E 2 1 1 1 0 1 2 0 0 1 1 1 0 1 0 1 0 0 0 1 0 14 1 1618.8315 Q8WVV9-4;C9J9G0;Q8WVV9;Q5JB52;B7WPG3;Q8WVV9-3;Q8WVV9-2;C9IYN3;H7BXH8;C9JJZ7 Q8WVV9-4 107 120 HNRNPLL;HNRPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 3 0.011594 64.52 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 11419000 0 11419000 0 0 0 0 6319 236 6414 28057;28058 18542;18543 18543 2 RQAVTNPNNTFYATK RLVGMPAKRQAVTNPN NNTFYATKRLIGRRYD K R Q T K R 2 1 3 0 0 1 0 0 0 0 0 1 0 1 1 0 3 0 1 1 0 15 1 1723.8642 B7Z4V2;P38646;D6RJI2;D6RA73 B7Z4V2 93 107 HSPA9 Stress-70 protein, mitochondrial yes no 3 2.3747E-56 128.85 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 24708000 2595500 4419800 5489500 2817300 2949900 6436100 6320 187 6415 28059;28060;28061;28062;28063;28064 18544;18545;18546;18547;18548 18545 5 RQCHMFTDQIK TEEKENYKRQCHMFTD HMFTDQIKVLQQRILE K R Q I K V 0 1 0 1 1 2 0 0 1 1 0 1 1 1 0 0 1 0 0 0 0 11 1 1462.6809 Q14149 Q14149 715 725 MORC3 MORC family CW-type zinc finger protein 3 yes yes 3 0.0063658 62.166 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 4027900 0 773130 0 192250 939430 2123100 6321 1096 6416 28065;28066;28067;28068 18549 18549 1 RQDSDLVQCGVTSPSSAEATGK HSVIQLARRQDSDLVQ SSAEATGKLAVDTFPA R R Q G K L 2 1 0 2 1 2 1 2 0 0 1 1 0 0 1 4 2 0 0 2 0 22 1 2292.0652 Q9HC52 Q9HC52 253 274 CBX8 Chromobox protein homolog 8 yes yes 3 1.8559E-15 90.06 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 1 24226000 0 3178500 4222800 0 9092900 7731500 6322 1519 6417 28069;28070;28071;28072;28073;28074 18550;18551;18552;18553;18554;18555 18551 6 RQKGTEGMEPEEGVTVESQPQVK LSPTKKRKRQKGTEGM VESQPQVKVEPLEEAI K R Q V K V 0 1 0 0 0 3 5 3 0 0 0 2 1 0 2 1 2 0 0 3 0 23 2 2542.2333 O15446;O15446-2 O15446 292 314 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes no 3;4 3.2745E-08 66.467 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 2 2 1 23443000 3269700 2291700 3901500 5482500 5715600 2781600 6323 706 6418 28075;28076;28077;28078;28079;28080;28081;28082 18556;18557;18558;18559;18560;18561 18559 6 RQLEDGDQPESK DFGFGGQKRQLEDGDQ DGDQPESKKLASQGDS K R Q S K K 0 1 0 2 0 2 2 1 0 0 1 1 0 0 1 1 0 0 0 0 0 12 1 1400.6532 Q92945-2;Q92945;E7EP96 Q92945-2 110 121 KHSRP Far upstream element-binding protein 2 yes no 2;3 8.091E-27 120.84 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 2 2 2 1 2 1 49866000 2005100 5791500 36184000 3444700 1182800 1258400 6324 1366 6419 28083;28084;28085;28086;28087;28088;28089;28090;28091;28092 18562;18563;18564;18565;18566 18562 5 RQLEDGDQPESKK DFGFGGQKRQLEDGDQ GDQPESKKLASQGDSI K R Q K K L 0 1 0 2 0 2 2 1 0 0 1 2 0 0 1 1 0 0 0 0 0 13 2 1528.7481 Q92945-2;Q92945;E7EP96 Q92945-2 110 122 KHSRP Far upstream element-binding protein 2 yes no 3 0.0055691 81.565 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 7442400 427030 1364100 3469900 717330 534970 929030 6325 1366 6420 28093;28094;28095;28096;28097;28098 18567;18568;18569;18570 18569 3 RQLQEDQENNLQDNQTSNSSPCR ESKEKTLKRQLQEDQE TSNSSPCRSNVGKGNI K R Q C R S 0 2 4 2 1 5 2 0 0 0 2 0 0 0 1 3 1 0 0 0 0 23 1 2760.2118 Q92576-2;Q92576 Q92576-2 1507 1529 PHF3 PHD finger protein 3 yes no 3 0.014476 32.896 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4721800 0 729310 1173900 0 1321300 1497300 6326 1353 6421 28099;28100;28101;28102 18571 18571 1 RQLQQLQEGTLQEYQK QDKLASLKRQLQQLQE GTLQEYQKRMKKLDQQ K R Q Q K R 0 1 0 0 0 6 2 1 0 0 3 1 0 0 0 0 1 0 1 0 0 16 1 1989.028 Q9H7L9 Q9H7L9 82 97 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 yes yes 3 5.7212E-29 113.01 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 14635000 3498100 2777600 2996400 1088200 0 4274800 6327 1500 6422 28103;28104;28105;28106;28107 18572;18573;18574;18575;18576;18577 18574 6 RQNALLEQQVR QQDIDDLKRQNALLEQ ALLEQQVRALEKARSS K R Q V R A 1 2 1 0 0 3 1 0 0 0 2 0 0 0 0 0 0 0 0 1 0 11 1 1353.7477 P61244-2;P61244;G3V5L1;G3V570 P61244-2 81 91 MAX Protein max yes no 3 3.2165E-07 107.03 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 2821200 0 579450 0 0 1082100 1159700 6328 981 6423 28108;28109;28110 18578;18579;18580;18581 18580 4 RQNLDEILQQHKLK NFYFNYKKRQNLDEIL ILQQHKLKMEKERNAR K R Q L K M 0 1 1 1 0 3 1 0 1 1 3 2 0 0 0 0 0 0 0 0 0 14 2 1761.985 C9J7T7;C9JE98;C9J239;Q9Y618-5;C9J0Q5;Q9Y618-4;C9JJF6;C9JFD3;Q9Y618-3;Q9Y618;C9JQE8;C9JNV9 C9J7T7 229 242 NCOR2 Nuclear receptor corepressor 2 yes no 4 0.0010194 77.74 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2174100 0 0 0 508960 239330 1425800 6329 224 6424 28111;28112;28113 18582 18582 1 RQQEEEAAAQMKEK KKQEEQAKRQQEEEAA AAAQMKEKEESIQLHQ K R Q E K E 3 1 0 0 0 3 4 0 0 0 0 2 1 0 0 0 0 0 0 0 0 14 2 1674.7995 Q9HAU5-2;Q9HAU5 Q9HAU5-2 81 94 UPF2 Regulator of nonsense transcripts 2 yes no 3 0.0034538 77.372 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 2 1 1 1 3550900 702650 385100 579950 738960 372070 772190 6330 1514 6425 28114;28115;28116;28117;28118;28119;28120 18583;18584 18583 2 RQQEGFKGTFPDAR RQQEEMMRRQQEGFKG KGTFPDAREQEIRMGQ R R Q A R E 1 2 0 1 0 2 1 2 0 0 0 1 0 2 1 0 1 0 0 0 0 14 2 1635.8118 Q15233;F5GYZ3 Q15233 365 378 NONO Non-POU domain-containing octamer-binding protein yes no 3;4 0.0010621 78.401 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 3 2 2 2 2 2 49272000 12840000 9421900 8623600 4664800 7733800 5987100 6331 1133 6426 28121;28122;28123;28124;28125;28126;28127;28128;28129;28130;28131;28132;28133 18585;18586;18587;18588;18589;18590;18591;18592 18585 8 RQQEPLGEDCPSELR IRKLVAVKRQQEPLGE EDCPSELREIIDECRA K R Q L R E 0 2 0 1 1 2 3 1 0 0 2 0 0 0 2 1 0 0 0 0 0 15 1 1812.8425 Q8NB16;Q8NB16-2;I3L2U3 Q8NB16 428 442 MLKL Mixed lineage kinase domain-like protein yes no 3 0.00043839 77.324 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 2 1 1 1 11374000 1612300 3142300 1516000 680280 324110 4098800 6332 1314 6427 28134;28135;28136;28137;28138;28139;28140 18593;18594;18595;18596;18597 18595 4 RQQHQEEEDILDVR RSRKSKKKRQQHQEEE EEDILDVRDEKDGGAR K R Q V R D 0 2 0 2 0 3 3 0 1 1 1 0 0 0 0 0 0 0 0 1 0 14 1 1793.8656 Q5T3I0;Q5T3I0-3 Q5T3I0 382 395 GPATCH4 G patch domain-containing protein 4 yes no 3 0.00079324 68.751 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 5293600 0 1153300 803220 607920 929370 1799800 6333 1191 6428 28141;28142;28143;28144;28145 18598;18599;18600;18601 18600 4 RQQHQEEEDILDVRDEK RSRKSKKKRQQHQEEE ILDVRDEKDGGAREAE K R Q E K D 0 2 0 3 0 3 4 0 1 1 1 1 0 0 0 0 0 0 0 1 0 17 2 2166.0301 Q5T3I0;Q5T3I0-3 Q5T3I0 382 398 GPATCH4 G patch domain-containing protein 4 yes no 4 3.7446E-73 125.33 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 20018000 3031800 2534800 3853600 2685900 3304800 4607400 6334 1191 6429 28146;28147;28148;28149;28150;28151 18602;18603;18604;18605;18606;18607 18607 6 RQSNVAAPGDATPPAEK NLKPIPLKRQSNVAAP DATPPAEKKYKPLNTT K R Q E K K 4 1 1 1 0 1 1 1 0 0 0 1 0 0 3 1 1 0 0 1 0 17 1 1707.854 Q96QC0;F5H5K4 Q96QC0 245 261 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 yes no 3 0.00075952 69.422 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 10296000 3016000 0 2815900 1976200 445210 2042200 6335 1414 6430 28152;28153;28154;28155;28156;28157 18608;18609;18610;18611 18610 4 RQTFITLEK TPPYPTSRRQTFITLE QTFITLEKFDGSENRP R R Q E K F 0 1 0 0 0 1 1 0 0 1 1 1 0 1 0 0 2 0 0 0 0 9 1 1134.6397 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1218 1226 RIF1 Telomere-associated protein RIF1 yes no 2 0.030976 95.775 By matching By matching By matching By matching By matching By MS/MS 1 1 9981000 0 0 0 0 2772500 7208400 6336 1201 6431 28158;28159 18612 18612 1 RQTLRLCEDQNGNPYVK EPPSQQRKRQTLRLCE QNGNPYVKDLNWIHVQ K R Q V K D 0 2 2 1 1 2 1 1 0 0 2 1 0 0 1 0 1 0 1 1 0 17 2 2090.0327 O95235;B4DL79 O95235 326 342 KIF20A Kinesin-like protein KIF20A yes no 4 0.014775 40.624 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3346500 0 0 1227300 608870 0 1510400 6337 767 6432 28160;28161;28162 18613 18613 1 RQYENHIFVGSK PDKLPLFKRQYENHIF NHIFVGSKTADPCCYG K R Q S K T 0 1 1 0 0 1 1 1 1 1 0 1 0 1 0 1 0 0 1 1 0 12 1 1476.7474 Q9NP92 Q9NP92 276 287 MRPS30 28S ribosomal protein S30, mitochondrial yes yes 3 0.0018612 69.03 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5042300 0 729670 850280 0 921890 2540500 6338 1523 6433 28163;28164;28165;28166 18614 18614 1 RRAADALEEQQR KGSLEEEKRRAADALE DALEEQQRCISELKAE K R R Q R C 3 3 0 1 0 2 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 12 2 1441.7386 Q14980-2;Q14980;F5H4J1 Q14980-2 723 734 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.011481 68.515 By matching By MS/MS By matching By matching By matching By matching 1 1 3328500 0 1897800 0 0 0 1430600 6339 1121 6434 28167;28168 18615 18615 1 RRALAAPAAEEK ________________ AAPAAEEKEEAREKML K R R E K E 5 2 0 0 0 0 2 0 0 0 1 1 0 0 1 0 0 0 0 0 0 12 2 1281.7153 Q01650 Q01650 8 19 SLC7A5 Large neutral amino acids transporter small subunit 1 yes yes 3 1.083E-06 102.4 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 9203700 0 3319400 5497000 387270 0 0 6340 1028 6435 28169;28170;28171 18616;18617 18616 2 RRDISSSLNSLADSNAR AKVVCLFRRRDISSSL SLADSNAREFEEESKQ R R R A R E 2 3 2 2 0 0 0 0 0 1 2 0 0 0 0 5 0 0 0 0 0 17 2 1860.9402 O94776 O94776 48 64 MTA2 Metastasis-associated protein MTA2 yes yes 3;4 8.049E-13 97.129 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 1 2 68992000 0 11348000 8735000 0 1439400 47470000 6341 754 6436 28172;28173;28174;28175;28176;28177;28178 18618;18619;18620;18621;18622;18623 18621 6 RRELLDQLQQK KGPLENPKRRELLDQL LLDQLQQKLYLIQMIP K R R Q K L 0 2 0 1 0 3 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 11 2 1425.8052 Q9H5Q4 Q9H5Q4 285 295 TFB2M Dimethyladenosine transferase 2, mitochondrial yes yes 3 0.025083 67.704 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 7108600 0 525310 1184200 0 803090 4596000 6342 1493 6437 28179;28180;28181;28182 18624 18624 1 RRFAIGSQVSEHSIIK SRIEKQLKRRFAIGSQ VSEHSIIKDFTKQKYP K R R I K D 1 2 0 0 0 1 1 1 1 3 0 1 0 1 0 3 0 0 0 1 0 16 2 1827.0115 P33992;B1AHB1 P33992 681 696 MCM5 DNA replication licensing factor MCM5 yes no 4 0.039696 35.836 By matching By matching By MS/MS By matching By matching By matching 1 1 1 8020700 0 0 937840 365840 0 6717000 6343 892 6438 28183;28184;28185 18625 18625 1 RRLDDQESPVYAAQQR ________________ PVYAAQQRRIPGSTEA K R R Q R R 2 3 0 2 0 3 1 0 0 0 1 0 0 0 1 1 0 0 1 1 0 16 2 1930.9609 Q96ST3;H3BMA2;H3BT34;H3BQ76;H3BQ88;H3BNA0;H3BNZ3;H3BQL7;H3BP90 Q96ST3 3 18 SIN3A Paired amphipathic helix protein Sin3a yes no 4 0.020418 40.278 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 6212900 874790 1050500 0 397540 1348900 2541100 6344 1420 6439 28186;28187;28188;28189;28190 18626 18626 1 RRLQELAELEAK LERKGMSKRRLQELAE ELAELEAKKAKMKGTL K R R A K K 2 2 0 0 0 1 3 0 0 0 3 1 0 0 0 0 0 0 0 0 0 12 2 1454.8205 A8MPX7;F5GWL7;Q9H5V9 A8MPX7 148 159 CXorf56 UPF0428 protein CXorf56 yes no 3 0.01156 68.355 By matching By matching By MS/MS By matching By matching By matching 1 1 1 6506300 0 1721300 2809400 1975600 0 0 6345 37 6440 28191;28192;28193 18627 18627 1 RRNETSFLPAK SSEAPPAKRRNETSFL ETSFLPAKKTSVKETQ K R R A K K 1 2 1 0 0 0 1 0 0 0 1 1 0 1 1 1 1 0 0 0 0 11 2 1317.7153 F8WAJ0;Q9H8H2;Q9H8H2-2;B4E3G7;Q9H8H2-3;Q9H8H2-4 F8WAJ0 21 31 DDX31 Probable ATP-dependent RNA helicase DDX31 yes no 3 0.0088678 85.533 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 13245000 0 0 2831900 2904000 7293600 215320 6346 565 6441 28194;28195;28196;28197 18628 18628 1 RRQTNNQNWGSQPIAQQPLQGGDHSGNYGYK GYNQPDSKRRQTNNQN HSGNYGYKSENQEFYQ K R R Y K S 1 2 4 1 0 6 0 5 1 1 1 1 0 0 2 2 1 1 2 0 0 31 2 3498.6526 O60506-2;O60506 O60506-2 542 572 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 5 0.025526 28.327 By matching By matching By matching By matching By matching By MS/MS 1 2825500 0 0 0 0 0 2825500 6347 731 6442 28198 18629 18629 0 RRSGASEANLIVAK ILQMICSKRRSGASEA EANLIVAKSWADVVKL K R R A K S 3 2 1 0 0 0 1 1 0 1 1 1 0 0 0 2 0 0 0 1 0 14 2 1470.8267 P46013;F5H4V4;P46013-2;E7EN66 P46013 646 659 MKI67 Antigen KI-67 no no 3 2.4788E-19 107.17 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 1 1 1 148130000 22033000 14122000 26918000 9419000 608850 75029000 6348 919;920 6443 28199;28200;28201;28202;28203;28204;28205 18630;18631;18632;18633;18634 18632 5 RRSPPADAIPK MSPKRIAKRRSPPADA PPADAIPKSKKVKDTR K R R P K S 2 2 0 1 0 0 0 0 0 1 0 1 0 0 3 1 0 0 0 0 0 11 2 1206.6833 C9JW69;P18754;P18754-2;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4 C9JW69 9 19 RCC1 Regulator of chromosome condensation yes no 3 0.039465 61.765 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 7223000 0 1265700 1401800 834080 1533000 2188500 6349 271 6444 28206;28207;28208;28209;28210 18635 18635 1 RRSSTVAPAQPDGAESEWTDVETR ESPNGSRKRRSSTVAP EWTDVETRCSVAVEMR K R R T R C 3 3 0 2 0 1 3 1 0 0 0 0 0 0 2 3 3 1 0 2 0 24 2 2644.2477 Q02241-2;H7BYN4;Q02241;B4E1K0 Q02241-2 805 828 KIF23 Kinesin-like protein KIF23 yes no 4 0.0019901 50.202 By matching By MS/MS By matching By matching By matching By matching 1 1335100 0 1335100 0 0 0 0 6350 660 6445 28211 18636 18636 1 RRTTQIINITMTK GRKTRSARRRTTQIIN IINITMTKKLDVEEPD R R R T K K 0 2 1 0 0 1 0 0 0 3 0 1 1 0 0 0 4 0 0 0 0 13 2 1574.8926 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9 Q14980-2 1795 1807 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.0039985 76.357 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 7216900 0 0 2169300 730230 1600500 2716900 6351 1121 6446 28212;28213;28214;28215 18637 18637 1 RRVVIVDPETNK SQKNTLRKRRVVIVDP IVDPETNKEMSVQEAY K R R N K E 0 2 1 1 0 0 1 0 0 1 0 1 0 0 1 0 1 0 0 3 0 12 2 1424.81 P15924;P15924-2 P15924 2464 2475 DSP Desmoplakin yes no 3 0.028641 74.962 By matching By MS/MS By matching By matching By matching By matching 1 1 1 3197800 0 1402700 878700 0 0 916370 6352 840 6447 28216;28217;28218 18638 18638 0 RSAPGGGSKVPQK KLLSISGKRSAPGGGS GGSKVPQKKVKLAADE K R S Q K K 1 1 0 0 0 1 0 3 0 0 0 2 0 0 2 2 0 0 0 1 0 13 2 1267.6997 P06748-2;P06748;P06748-3;E5RI98 P06748-2 142 154 NPM1 Nucleophosmin yes no 3 8.8912E-15 107.93 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 23434000 3972300 10557000 0 2152500 3362300 3389300 6353 801 6448 28219;28220;28221;28222;28223 18639;18640;18641;18642;18643 18643 5 RSAVETQANNLICR AYLDLLKKRSAVETQA QANNLICRTKADVTPP K R S C R T 2 2 2 0 1 1 1 0 0 1 1 0 0 0 0 1 1 0 0 1 0 14 1 1630.8209 O75362 O75362 629 642 ZNF217 Zinc finger protein 217 yes yes 3 0.0012102 64.244 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 6426000 1007200 1031100 982880 0 0 3405000 6354 740 6449 28224;28225;28226;28227 18644;18645;18646;18647 18645 4 RSDDMFTFHGPGK QQKNSGFRRSDDMFTF FTFHGPGKSVFGTPTL R R S G K S 0 1 0 2 0 0 0 2 1 0 0 1 1 2 1 1 1 0 0 0 0 13 1 1493.6721 P49792 P49792 1127 1139 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 3 0.00078797 88.282 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2 1 6866800 0 791090 1033300 766320 1931500 2344600 6355 945 6450 28228;28229;28230;28231;28232;28233 18648;18649 18648 1 RSDGPPAACDAHQCDDAETILLK QDDKKGQKRSDGPPAA DAETILLKAVLLQVIC K R S L K A 4 1 0 4 2 1 1 1 1 1 2 1 0 0 2 1 1 0 0 0 0 23 1 2539.1431 O60287 O60287 533 555 URB1 Nucleolar pre-ribosomal-associated protein 1 yes yes 4 0.0016057 48.597 By matching By matching By matching By matching By matching By MS/MS 1 1083900 0 0 0 0 0 1083900 6356 728 6451 28234 18650 18650 1 RSDHLINTESEAVNLSK LQEGACQKRSDHLINT SEAVNLSKVKVFTKSA K R S S K V 1 1 2 1 0 0 2 0 1 1 2 1 0 0 0 3 1 0 0 1 0 17 1 1911.965 Q6PJP8 Q6PJP8 652 668 DCLRE1A DNA cross-link repair 1A protein yes yes 3 0.0023144 47.942 By matching By matching By MS/MS By matching By matching By matching 1 1 3467400 2357700 0 1109700 0 0 0 6357 1232 6452 28235;28236 18651 18651 1 RSEACPCQPDSGSPLPAEEEK MKRSIEGRRSEACPCQ PLPAEEEKRLSAESGL R R S E K R 2 1 0 1 2 1 4 1 0 0 1 1 0 0 4 3 0 0 0 0 0 21 1 2343.0107 Q14160-2;Q14160;Q14160-3 Q14160-2 411 431 SCRIB Protein scribble homolog yes no 3 0.0025088 45.423 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2681100 0 742720 572090 0 0 1366300 6358 1098 6453 28237;28238;28239 18652 18652 1 RSEAEEAITSFNGHKPPGSSEPITVK VAFIRFDKRSEAEEAI SSEPITVKFAANPNQN K R S V K F 2 1 1 0 0 0 4 2 1 2 0 2 0 1 3 4 2 0 0 1 0 26 2 2767.3777 Q15717 Q15717 157 182 ELAVL1 ELAV-like protein 1 yes yes 4;5 1.9822E-117 130.57 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 1 2 748440000 149480000 57793000 196960000 25195000 34217000 284790000 6359 1146 6454 28240;28241;28242;28243;28244;28245;28246;28247;28248 18653;18654;18655;18656;18657;18658;18659;18660;18661;18662 18655 10 RSEIPCYWENQPTGCQK ________________ NQPTGCQKLNCAFHHN K R S Q K L 0 1 1 0 2 2 2 1 0 1 0 1 0 0 2 1 1 1 1 0 0 17 1 2151.9466 B4DLG2;O75152;E9PQ61;E9PBY7 B4DLG2 7 23 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 3 1.6926E-58 122.5 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 37135000 11925000 2639900 8833700 2493200 7774700 3468300 6360 97 6455 28249;28250;28251;28252;28253;28254 18663;18664;18665;18666;18667;18668 18664 5 RSELSQDAEPAGSQETK EERRSLRKRSELSQDA PAGSQETKDSGSQEVL K R S T K D 2 1 0 1 0 2 3 1 0 0 1 1 0 0 1 3 1 0 0 0 0 17 1 1831.8548 E9PEL7;Q9BVJ6;Q9BVJ6-2;F8WD00 E9PEL7 381 397 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 3 0.0028077 46.877 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 3603000 0 0 803450 500620 829120 1469800 6361 425 6456 28255;28256;28257;28258 18669 18669 1 RSEVSEEVTENGTEEAAK NITSLQFKRSEVSEEV NGTEEAAKKPKKKKKK K R S A K K 2 1 1 0 0 0 6 1 0 0 0 1 0 0 0 2 2 0 0 2 0 18 1 1963.8971 Q3B726 Q3B726 207 224 TWISTNB DNA-directed RNA polymerase I subunit RPA43 yes yes 3 0.00088879 62.916 By matching By matching By matching By matching By matching By MS/MS 1 1853700 0 0 0 0 0 1853700 6362 1164 6457 28259 18670 18670 1 RSEVVESTTESQDKENSHQK TLRRSSRRRSEVVEST DKENSHQKKERRKEEE R R S Q K K 0 1 1 1 0 2 4 0 1 0 0 2 0 0 0 4 2 0 0 2 0 20 2 2317.0782 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1421 1440 RIF1 Telomere-associated protein RIF1 yes no 4 0.00097731 53.327 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 9253300 1370600 1567700 1501600 1897400 823990 2092100 6363 1201 6458 28260;28261;28262;28263;28264;28265 18671 18671 1 RSGASEANLIVAK LQMICSKRRSGASEAN EANLIVAKSWADVVKL R R S A K S 3 1 1 0 0 0 1 1 0 1 1 1 0 0 0 2 0 0 0 1 0 13 1 1314.7256 P46013;F5H4V4;P46013-2;E7EN66 P46013 647 659 MKI67 Antigen KI-67 no no 3 0.0088568 71.933 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 2 1 1 3016100 515820 852540 885700 762040 0 0 6364 919;920 6459 28266;28267;28268;28269;28270;28271 18672;18673;18674;18675 18672 4 RSGGGGGRFSSCGGGGGSFGAGGGFGSR RTTSSSTRRSGGGGGR AGGGFGSRSLVNLGGS R R S S R S 1 3 0 0 1 0 0 15 0 0 0 0 0 3 0 5 0 0 0 0 0 28 2 2449.069 P04264;CON__P04264 P04264 38 65 KRT1 Keratin, type II cytoskeletal 1 yes no 4 0.00020781 42.416 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 11186000 0 0 3775800 3946900 1068700 2394500 + 6365 789 6460 28272;28273;28274;28275 18676;18677 18677 2 RSHDFSNSENLEK CKFGTSCKRSHDFSNS SNSENLEKLEKLGMSS K R S E K L 0 1 2 1 0 0 2 0 1 0 1 1 0 1 0 3 0 0 0 0 0 13 1 1561.7121 Q9H0J9;G5E9U9 Q9H0J9 197 209 PARP12 Poly [ADP-ribose] polymerase 12 yes no 3 0.00097522 82.202 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 8339500 0 1528400 1619700 1635300 1436900 2119300 6366 1480 6461 28276;28277;28278;28279;28280 18678;18679 18678 2 RSHQLIHAASLK ECKLQTCKRSHQLIHA LIHAASLKLLQDQGLN K R S L K L 2 1 0 0 0 1 0 0 2 1 2 1 0 0 0 2 0 0 0 0 0 12 1 1359.7735 Q96H79 Q96H79 209 220 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 3 0.0023505 64.945 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 6539800 0 0 2177100 570870 2071900 1720000 6367 1390 6462 28281;28282;28283;28284 18680;18681;18682;18683 18683 4 RSIADSEESEAYK KPPCGATKRSIADSEE SEESEAYKSLFTTHSS K R S Y K S 2 1 0 1 0 0 3 0 0 1 0 1 0 0 0 3 0 0 1 0 0 13 1 1483.6791 Q9BY42;A8MSH5 Q9BY42 267 279 RTFDC1 Protein RTF2 homolog yes no 2;3 1.6504E-24 116.79 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 100460000 17098000 17132000 18490000 10664000 13670000 23410000 6368 38 6463 28285;28286;28287;28288;28289;28290;28291;28292;28293;28294;28295;28296;28297 18684;18685;18686;18687;18688;18689;18690;18691;18692;18693 18693 10 RSIADSEESEAYKSLFTTHSSAK KPPCGATKRSIADSEE FTTHSSAKRSKEESAH K R S A K R 3 1 0 1 0 0 3 0 1 1 1 2 0 1 0 6 2 0 1 0 0 23 2 2543.214 Q9BY42;A8MSH5 Q9BY42 267 289 RTFDC1 Protein RTF2 homolog yes no 4 3.4764E-22 89.622 By matching By matching By MS/MS By matching By matching By matching 1 15845000 0 0 15845000 0 0 0 6369 38 6464 28298 18694 18694 0 RSIFASPESVTGK KNKKGQVKRSIFASPE SPESVTGKVGVGTCGI K R S G K V 1 1 0 0 0 0 1 1 0 1 0 1 0 1 1 3 1 0 0 1 0 13 1 1377.7252 O75940 O75940 196 208 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 2;3 2.6308E-09 101.75 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 3 3 137660000 12134000 17552000 14373000 16358000 23839000 53407000 6370 751 6465 28299;28300;28301;28302;28303;28304;28305;28306;28307;28308;28309;28310;28311;28312;28313 18695;18696;18697;18698;18699;18700;18701;18702;18703 18696 9 RSIGASPNPFSVHTATAVPSGK PVMILKKKRSIGASPN ATAVPSGKIASPVSRK K R S G K I 3 1 1 0 0 0 0 2 1 1 0 1 0 1 3 4 2 0 0 2 0 22 1 2180.1338 P09884;A6NMQ1 P09884 185 206 POLA1 DNA polymerase alpha catalytic subunit;DNA polymerase yes no 4 0.0047892 43.328 By matching By MS/MS By matching By matching By matching By matching 1 1 1164100 0 705500 0 458650 0 0 6371 30 6466 28314;28315 18704 18704 0 RSLDPADERDDVLAK ALRLNLLKRSLDPADE ERDDVLAKRLKMEGHE K R S A K R 2 2 0 4 0 0 1 0 0 0 2 1 0 0 1 1 0 0 0 1 0 15 2 1698.8537 Q8WXI9 Q8WXI9 16 30 GATAD2B Transcriptional repressor p66-beta yes yes 3 0.0022889 75.589 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 2 1 55478000 2135700 6518300 13831000 1019400 3762400 28211000 6372 1344 6467 28316;28317;28318;28319;28320;28321;28322 18705;18706;18707 18707 3 RSLEVWGSQEALEEAK YLKLQIVKRSLEVWGS QEALEEAKEVRQENRE K R S A K E 2 1 0 0 0 1 4 1 0 0 2 1 0 0 0 2 0 1 0 1 0 16 1 1830.9112 F2Z2T2;P23025 F2Z2T2 189 204 XPA DNA repair protein complementing XP-A cells yes no 3 4.707E-27 109.67 By matching By matching By matching By MS/MS By matching By matching 1 3000000 0 0 0 3000000 0 0 6373 475 6468 28323 18708 18708 1 RSLGEPAAGEGSAK PPAAPASKRSLGEPAA AAGEGSAKRSQPEPGV K R S A K R 3 1 0 0 0 0 2 3 0 0 1 1 0 0 1 2 0 0 0 0 0 14 1 1328.6684 Q9BUL9 Q9BUL9 171 184 RPP25 Ribonuclease P protein subunit p25 yes yes 2 0.019603 58.461 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 5639000 680930 903380 1710400 504460 567750 1272100 6374 1450 6469 28324;28325;28326;28327;28328;28329 18709 18709 1 RSLKQPLEQNQTISPLSTYEESK VLKKINSKRSLKQPLE LSTYEESKVSKYAFEL K R S S K V 0 1 1 0 0 3 3 0 0 1 3 2 0 0 2 4 2 0 1 0 0 23 2 2675.3766 Q9UQR1;F5H173 Q9UQR1 399 421 ZNF148 Zinc finger protein 148 yes no 4 4.4839E-08 65.111 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 34053000 0 0 19044000 10205000 4803700 0 6375 1626 6470 28330;28331;28332 18710;18711 18710 2 RSLRPDPNFDALISK CRKKLVSKRSLRPDPN NFDALISKIYPSRDEY K R S S K I 1 2 1 2 0 0 0 0 0 1 2 1 0 1 2 2 0 0 0 0 0 15 2 1727.9319 Q99496;Q06587-2;Q06587 Q99496 98 112 RNF2;RING1 E3 ubiquitin-protein ligase RING2;E3 ubiquitin-protein ligase RING1 no no 3;4 1.6229E-08 100.11 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 2 2 172360000 30975000 5757500 32308000 5175100 12646000 85499000 6376 1424;1043 6471 28333;28334;28335;28336;28337;28338;28339;28340;28341;28342 18712;18713;18714;18715;18716;18717;18718;18719;18720;18721 18720 10 RSLTVSDDAESSEPERK RRRGRKPKRSLTVSDD ESSEPERKRQKSVSDP K R S R K R 1 2 0 2 0 0 3 0 0 0 1 1 0 0 1 4 1 0 0 1 0 17 2 1904.9076 Q8NFC6;H0Y9Y2 Q8NFC6 2953 2969 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes no 3 0.00073751 71.286 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 12667000 1422300 2590500 2476000 1646100 1764900 2766800 6377 1325 6472 28343;28344;28345;28346;28347;28348 18722;18723;18724;18725;18726;18727;18728 18724 7 RSMGGAAIAPPTSLVEK DYERERRKRSMGGAAI PPTSLVEKDKELPRDF K R S E K D 3 1 0 0 0 0 1 2 0 1 1 1 1 0 2 2 1 0 0 1 0 17 1 1683.8978 Q96I25;H0Y6J6;Q5W012;Q5W011;Q5W010 Q96I25 168 184 RBM17 Splicing factor 45 yes no 3 0.00075952 69.422 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 37373000 6779800 1716500 10667000 0 3541600 14668000 6378 1395 6473 28349;28350;28351;28352;28353 18729;18730;18731 18729 3 RSMQQLDPSPARK KVSVQLGKRSMQQLDP LDPSPARKLLKLQLQN K R S R K L 1 2 0 1 0 2 0 0 0 0 1 1 1 0 2 2 0 0 0 0 0 13 2 1512.7831 Q9H410;B4DWT2;Q5JW54;Q9H410-2;Q9H410-3 Q9H410 323 335 DSN1 Kinetochore-associated protein DSN1 homolog yes no 3 0.03827 53.3 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 8497600 0 1095200 1767200 1588000 1872300 2174900 6379 1488 6474 28354;28355;28356;28357;28358 18732 18732 1 RSNVLTGLQDSSTDNRAK VQVPTFARRSNVLTGL SSTDNRAKLDLGAQGK R R S A K L 1 2 2 2 0 1 0 1 0 0 2 1 0 0 0 3 2 0 0 1 0 18 2 1960.9926 O00257;O00257-3 O00257 89 106 CBX4 E3 SUMO-protein ligase CBX4 yes no 3 3.4948E-13 96.143 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 15259000 2492900 1750100 3364000 3554500 0 4097300 6380 687 6475 28359;28360;28361;28362;28363 18733;18734;18735 18735 3 RSNVRWDHESVCK RNLAPDEKRSNVRWDH WDHESVCKYYLCGFCP K R S C K Y 0 2 1 1 1 0 1 0 1 0 0 1 0 0 0 2 0 1 0 2 0 13 2 1671.79 O95232;F5H1W9;H7C5U7;O95232-2;C9JL41 O95232 24 36 LUC7L3 Luc7-like protein 3 yes no 3;4 0.0019992 80.245 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 66252000 3253700 4080500 14568000 11760000 19572000 13017000 6381 766 6476 28364;28365;28366;28367;28368;28369;28370;28371;28372;28373;28374 18736;18737;18738;18739;18740 18736 5 RSPCNLAIPSEVDVEK GNCVDMWKRSPCNLAI PSEVDVEKYAKVEKSI K R S E K Y 1 1 1 1 1 0 2 0 0 1 1 1 0 0 2 2 0 0 0 2 0 16 1 1812.904 Q8NEM7-2;F5GX46;Q8NEM7;E7ER46 Q8NEM7-2 296 311 SUPT20H Transcription factor SPT20 homolog yes no 3 1.8976E-06 79.837 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 10301000 8252300 0 0 2048500 0 0 6382 367 6477 28375;28376 18741;18742 18742 1 RSPHFFQPTNQQFK RALRLLARRSPHFFQP QPTNQQFKSLPEYLEN R R S F K S 0 1 1 0 0 3 0 0 1 0 0 1 0 3 2 1 1 0 0 0 0 14 1 1760.8747 Q96FV9 Q96FV9 503 516 THOC1 THO complex subunit 1 yes yes 3 0.014123 42.242 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3582400 0 385500 0 0 996590 2200300 6383 1386 6478 28377;28378;28379 18743 18743 1 RSPSAPAATSSASSSTSSYK SHEAPGTKRSPSAPAA SSSTSSYKRAPASSAP K R S Y K R 4 1 0 0 0 0 0 0 0 0 0 1 0 0 2 9 2 0 1 0 0 20 1 1928.9076 E9PE58;Q15345-3;Q15345 E9PE58 334 353 LRRC41 Leucine-rich repeat-containing protein 41 yes no 3 5.5708E-18 97.271 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 16685000 870570 3827400 4139600 1018400 1306600 5522500 6384 424 6479 28380;28381;28382;28383;28384;28385;28386 18744;18745;18746;18747;18748;18749;18750 18744 6 RSQANGAGALSYVSPNTSKCPVTIPEDQK LREQYDEKRSQANGAG VTIPEDQKKFIDQVVE K R S Q K K 3 1 2 1 1 2 1 2 0 1 1 2 0 0 3 4 2 0 1 2 0 29 2 3074.5091 O95453-2;O95453-3;O95453;F5H1Z4 O95453-2 89 117 PARN Poly(A)-specific ribonuclease PARN yes no 4 8.3324E-13 63.932 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 33399000 0 9856400 10549000 4228000 0 8765700 6385 772 6480 28387;28388;28389;28390 18751;18752;18753;18754 18751 4 RSQEDEISSPVNK SILKRGLKRSQEDEIS EISSPVNKVRRVSFAD K R S N K V 0 1 1 1 0 1 2 0 0 1 0 1 0 0 1 3 0 0 0 1 0 13 1 1487.7216 Q5UIP0-2;Q5UIP0;H7C2B5 Q5UIP0-2 2188 2200 RIF1 Telomere-associated protein RIF1 yes no 3 0.00067409 83.877 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 18858000 2107500 3567900 4447000 1725600 2522200 4487400 6386 1201 6481 28391;28392;28393;28394;28395;28396;28397 18755;18756;18757;18758;18759;18760 18757 6 RSQEDEISSPVNKVR SILKRGLKRSQEDEIS SSPVNKVRRVSFADPI K R S V R R 0 2 1 1 0 1 2 0 0 1 0 1 0 0 1 3 0 0 0 2 0 15 2 1742.8911 Q5UIP0-2;Q5UIP0;H7C2B5 Q5UIP0-2 2188 2202 RIF1 Telomere-associated protein RIF1 yes no 3 0.0076027 59.884 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 7179600 1014500 1275400 2210700 858620 599910 1220400 6387 1201 6482 28398;28399;28400;28401;28402;28403 18761;18762 18762 2 RSQPEPGVADEDQTA AAGEGSAKRSQPEPGV VADEDQTA________ K R S T A - 2 1 0 2 0 2 2 1 0 0 0 0 0 0 2 1 1 0 0 1 0 15 1 1598.7172 Q9BUL9 Q9BUL9 185 199 RPP25 Ribonuclease P protein subunit p25 yes yes 2 0.034979 50.305 By matching By matching By matching By matching By MS/MS By matching 1 1 1 20176000 0 6571300 0 0 5692700 7912500 6388 1450 6483 28404;28405;28406 18763 18763 1 RSQSHLPYFTPKPPQDSAVIK SIDRNNLKRSQSHLPY PQDSAVIKAGYCVKQG K R S I K A 1 1 0 1 0 2 0 0 1 1 1 2 0 1 4 3 1 0 1 1 0 21 2 2395.2648 Q9HB21;Q9HB21-2;Q5RGS4 Q9HB21 174 194 PLEKHA1 Pleckstrin homology domain-containing family A member 1 yes no 4 0.0040042 45.844 By matching By matching By matching By matching By matching By MS/MS 1 1 4727900 0 0 0 1014600 0 3713300 6389 1516 6484 28407;28408 18764 18764 1 RSREDAGDNDDTEGAIGVR REHGEKKKRSREDAGD TEGAIGVRNKVAGGKM K R S V R N 2 3 1 4 0 0 2 3 0 1 0 0 0 0 0 1 1 0 0 1 0 19 2 2031.9206 Q9H0S4;G5E955 Q9H0S4 423 441 DDX47 Probable ATP-dependent RNA helicase DDX47 yes no 3;4 1.1194E-25 101.78 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 1 1 27160000 4313900 4981800 6460600 3330600 357090 7715500 6390 1481 6485 28409;28410;28411;28412;28413;28414;28415;28416;28417;28418 18765;18766;18767;18768;18769;18770;18771;18772;18773 18767 9 RSRVEEPSGAVTTPAGVIAAAGPQGPGTGE STGEPEVKRSRVEEPS PQGPGTGE________ K R S G E - 5 2 0 0 0 1 3 6 0 1 0 0 0 0 4 2 3 0 0 3 0 30 2 2818.4209 P85037;P85037-2;I3L0E1 P85037 704 733 FOXK1 Forkhead box protein K1 yes no 3 4.7534E-111 121.97 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 75412000 0 31767000 34030000 0 0 9615500 6391 1017 6486 28419;28420;28421 18774;18775;18776 18776 3 RSSGFISELPSEEGK FPSLRQEKRSSGFISE ELPSEEGKKLEHFTKL K R S G K K 0 1 0 0 0 0 3 2 0 1 1 1 0 1 1 4 0 0 0 0 0 15 1 1621.7948 Q5VZK9-2;Q5VZK9 Q5VZK9-2 966 980 LRRC16A Leucine-rich repeat-containing protein 16A yes no 3 0.0011404 66.826 By MS/MS By matching By matching By matching By matching By matching 1 1 2795800 1736700 0 0 1059100 0 0 6392 1212 6487 28422;28423 18777 18777 1 RSSGKGNSSDHEGCWNEESWTFSQSGTSGSK RANVDRGKRSSGKGNS QSGTSGSKKFKKTKPK K R S S K K 0 1 2 1 1 1 3 5 1 0 0 2 0 1 0 9 2 2 0 0 0 31 2 3375.4083 C9JA69;Q8WY36-2;Q8WY36 C9JA69 641 671 BBX HMG box transcription factor BBX yes no 4 0.013719 27.208 By matching By matching By MS/MS By matching By matching By matching 1 1207400 0 0 1207400 0 0 0 6393 238 6488 28424 18778 18778 1 RSSNPPARSQSSDTEQQSPTSGGGK PKENAWVKRSSNPPAR SPTSGGGKVAPAQPSE K R S G K V 1 2 1 1 0 3 1 3 0 0 0 1 0 0 3 7 2 0 0 0 0 25 2 2545.1753 B4DS13;E7EPC9;P23588;E7EX17 B4DS13 448 472 EIF4B Eukaryotic translation initiation factor 4B yes no 4 0.0047334 39.223 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1493800 398870 0 0 593660 0 501310 6394 121 6489 28425;28426;28427 18779 18779 1 RSTRIPGTDAQAQAEDMNVK PSVIVTRRRSTRIPGT QAEDMNVKLEGEPSVR R R S V K L 3 2 1 2 0 2 1 1 0 1 0 1 1 0 1 1 2 0 0 1 0 20 2 2187.0702 Q6PJG2;F6RU81 Q6PJG2 571 590 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 4 0.0021287 49.773 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 6240400 788330 0 821350 828500 1185900 2616300 6395 1231 6490 28428;28429;28430;28431;28432 18780;18781 18781 2 RSTSSFSCLSR AVVSGGSRRSTSSFSC SSFSCLSRHGGGGGGF R R S S R H 0 2 0 0 1 0 0 0 0 0 1 0 0 1 0 5 1 0 0 0 0 11 1 1286.6037 P35908;CON__P35908 P35908 35 45 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 3.8865E-21 124.38 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 45130000 3364600 6557800 10577000 7740400 5984000 10905000 + 6396 302 6491 28433;28434;28435;28436;28437;28438 18782;18783;18784;18785;18786;18787 18783 5 RSTSSFSCLSRHGGGGGGFGGGGFGSR AVVSGGSRRSTSSFSC GGGGFGSRSLVGLGGT R R S S R S 0 3 0 0 1 0 0 11 1 0 1 0 0 3 0 6 1 0 0 0 0 27 2 2588.1687 P35908;CON__P35908 P35908 35 61 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 4 0.035815 27.09 By matching By matching By MS/MS By matching By matching By matching 1 1 1 7922000 0 0 3253200 3389000 1279800 0 + 6397 302 6492 28439;28440;28441 18788 18788 1 RSTYNYSLPITVK SDLPVKAKRSTYNYSL YSLPITVKKTSSQLVT K R S V K K 0 1 1 0 0 0 0 0 0 1 1 1 0 0 1 2 2 0 2 1 0 13 1 1540.8249 Q5T7U1;Q9Y5Q8-2;H7BY84;Q9Y5Q8;Q9Y5Q8-3;H0Y5D2;H0Y3Y0;C9J393;H9KV68 Q5T7U1 273 285 GTF3C5 General transcription factor 3C polypeptide 5 yes no 2;3 2.9019E-09 101.2 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 74355000 0 37347000 17873000 7944200 0 11191000 6398 657 6493 28442;28443;28444;28445;28446 18789;18790;18791;18792;18793 18789 4 RSTYNYSLPITVKK SDLPVKAKRSTYNYSL SLPITVKKTSSQLVTM K R S K K T 0 1 1 0 0 0 0 0 0 1 1 2 0 0 1 2 2 0 2 1 0 14 2 1668.9199 Q5T7U1;Q9Y5Q8-2;H7BY84;Q9Y5Q8;Q9Y5Q8-3;H0Y5D2;H0Y3Y0;C9J393;H9KV68 Q5T7U1 273 286 GTF3C5 General transcription factor 3C polypeptide 5 yes no 3 1.6622E-07 99.069 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 28268000 6105400 0 17669000 3494600 998910 0 6399 657 6494 28447;28448;28449;28450 18794;18795 18795 2 RSVENQESVEIINDLK KRTPRRIKRSVENQES VEIINDLKVSTVTSPS K R S L K V 0 1 2 1 0 1 3 0 0 2 1 1 0 0 0 2 0 0 0 2 0 16 1 1871.9589 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 1877 1892 AHCTF1 Protein ELYS yes no 3 6.4038E-143 156.29 By matching By MS/MS By matching By matching By matching By matching 1 7580200 0 7580200 0 0 0 0 6400 1345 6495 28451 18796 18796 0 RSVNVNAASGGVQNSGIVR NKPTTVNKRSVNVNAA VQNSGIVREAPATSIA K R S V R E 2 2 3 0 0 1 0 3 0 1 0 0 0 0 0 3 0 0 0 4 0 19 1 1883.9926 Q8NHV4-2;Q8NHV4;G3V3F1 Q8NHV4-2 235 253 NEDD1 Protein NEDD1 yes no 3 2.3877E-17 95.988 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 8765700 1753600 1641300 886460 789600 1539900 2154900 6401 585 6496 28452;28453;28454;28455;28456;28457 18797;18798;18799;18800;18801;18802 18799 5 RSYEQHNGVDGNMK GSPTILGKRSYEQHNG NGVDGNMKKRLLMPSR K R S M K K 0 1 2 1 0 1 1 2 1 0 0 1 1 0 0 1 0 0 1 1 0 14 1 1633.7267 Q13330;Q13330-3;E7EN71;H0Y4T7;F8W9Y9 Q13330 583 596 MTA1 Metastasis-associated protein MTA1 yes no 3 0.00066006 79.639 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 3366600 0 626280 1876500 0 0 863820 6402 1078 6497 28458;28459;28460 18803;18804 18803 2 RSYEQHNGVDGNMKK GSPTILGKRSYEQHNG GVDGNMKKRLLMPSRG K R S K K R 0 1 2 1 0 1 1 2 1 0 0 2 1 0 0 1 0 0 1 1 0 15 2 1761.8217 Q13330;Q13330-3;E7EN71;H0Y4T7;F8W9Y9 Q13330 583 597 MTA1 Metastasis-associated protein MTA1 yes no 4 0.0021705 59.709 By matching By MS/MS By matching By matching By matching By matching 1 1 2157900 0 1487900 0 0 0 669910 6403 1078 6498 28461;28462 18805 18805 1 RSYESVEGNIK TAHEISLKRSYESVEG ESVEGNIKQGMSMRES K R S I K Q 0 1 1 0 0 0 2 1 0 1 0 1 0 0 0 2 0 0 1 1 0 11 1 1280.6361 E7EVK1;O75376;O75376-2 E7EVK1 1152 1162 NCOR1 Nuclear receptor corepressor 1 yes no 2 0.016628 83.045 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 980610 0 293840 0 0 0 686770 6404 390 6499 28463;28464 18806;18807 18806 2 RTAAENDFVTLK KYEDEINKRTAAENDF ENDFVTLKKDVDNAYM K R T L K K 2 1 1 1 0 0 1 0 0 0 1 1 0 1 0 0 2 0 0 1 0 12 1 1363.7096 P35908;CON__P35908 P35908 275 286 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 8.5942E-06 100.73 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 5415000 0 4127400 0 0 1287600 0 + 6405 302 6500 28465;28466;28467 18808;18809 18809 2 RTAAENDFVTLKK KYEDEINKRTAAENDF NDFVTLKKDVDNAYMI K R T K K D 2 1 1 1 0 0 1 0 0 0 1 2 0 1 0 0 2 0 0 1 0 13 2 1491.8045 P35908;CON__P35908 P35908 275 287 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 0.0057365 81.904 By matching By MS/MS By matching By matching By matching By matching 1 1 11203000 0 5101000 6102200 0 0 0 + 6406 302 6501 28468;28469 18810;18811 18811 2 RTAAENEFVTLK KYEDEINKRTAAENEF ENEFVTLKKDVDAAYM K R T L K K 2 1 1 0 0 0 2 0 0 0 1 1 0 1 0 0 2 0 0 1 0 12 1 1377.7252 P02538;CON__P02538;E7EUE8;CON__P50446;P04259;CON__P04259 P02538 260 271 KRT6A;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6B no no 3 0.013171 82.069 By matching By matching By matching By matching By MS/MS By matching 1 1 1085100 0 0 0 0 701230 383910 + 6407 287;788 6502 28470;28471 18812 18812 0 RTAAENEFVTLKK KYEDEINKRTAAENEF NEFVTLKKDVDAAYMN K R T K K D 2 1 1 0 0 0 2 0 0 0 1 2 0 1 0 0 2 0 0 1 0 13 2 1505.8202 P02538;CON__P02538;E7EUE8;CON__P50446;P04259;CON__P04259 P02538 260 272 KRT6A;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6B no no 3 0.020701 70.373 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 4452000 0 1107700 791400 0 2552800 0 + 6408 287;788 6503 28472;28473;28474 18813;18814 18813 1 RTAEQSCDQKLTNTNR GRDLSGNKRTAEQSCD QKLTNTNRALALNCFA K R T N R A 1 2 2 1 1 2 1 0 0 0 1 1 0 0 0 1 3 0 0 0 0 16 2 1920.9072 B5ME40;F5GXG0;Q96T88 B5ME40 106 121 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 3 0.014474 50.831 By matching By matching By MS/MS By matching By matching By matching 1 1 1074300 0 0 850190 224100 0 0 6409 175 6504 28475;28476 18815 18815 1 RTAEVPVSEASGQAPPAK GPHDKGVKRTAEVPVS SGQAPPAKAAKQDIED K R T A K A 4 1 0 0 0 1 2 1 0 0 0 1 0 0 3 2 1 0 0 2 0 18 1 1793.9272 F8W689;P48382;B7Z848 F8W689 432 449 RFX5 DNA-binding protein RFX5 yes no 3 0.00084752 66.152 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 2 1 1 2 5746000 802680 793070 915550 820290 788440 1625900 6410 553 6505 28477;28478;28479;28480;28481;28482;28483;28484 18816;18817;18818;18819;18820 18820 4 RTAITTPNFK SSKPGKNKRTAITTPN AITTPNFKKLHEAHFK K R T F K K 1 1 1 0 0 0 0 0 0 1 0 1 0 1 1 0 3 0 0 0 0 10 1 1147.635 Q9BXS6-2;Q9BXS6-3;Q9BXS6;E7ERR5;Q9BXS6-5;E9PB35;H0YMD2;Q9BXS6-4 Q9BXS6-2 177 186 NUSAP1 Nucleolar and spindle-associated protein 1 no no 2 0.0224 87.789 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 18288000 1616100 3249300 5655500 1505400 1657700 4604200 6411 1463;1464 6506 28485;28486;28487;28488;28489;28490 18821 18821 1 RTAITTPNFKK SSKPGKNKRTAITTPN ITTPNFKKLHEAHFKE K R T K K L 1 1 1 0 0 0 0 0 0 1 0 2 0 1 1 0 3 0 0 0 0 11 2 1275.7299 Q9BXS6-2;Q9BXS6-3;Q9BXS6;E7ERR5;Q9BXS6-5;E9PB35;H0YMD2;Q9BXS6-4 Q9BXS6-2 177 187 NUSAP1 Nucleolar and spindle-associated protein 1 no no 3 0.012121 80.014 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 8414900 0 0 3468900 163550 1480900 3301500 6412 1463;1464 6507 28491;28492;28493;28494 18822;18823 18823 2 RTALHGESNSVLIIGPR KHLSELLKRTALHGES SVLIIGPRGSGKTMLI K R T P R G 1 2 1 0 0 0 1 2 1 2 2 0 0 0 1 2 1 0 0 1 0 17 1 1819.0064 O43929;C9JGH7;C9J2X8;Q53SE3 O43929 53 69 ORC4;ORC4L Origin recognition complex subunit 4 yes no 3 0.028309 33.667 By matching By matching By matching By matching By matching By MS/MS 1 1 2085600 0 0 0 0 938200 1147400 6413 725 6508 28495;28496 18824 18824 1 RTALHGESNSVLIIGPRGSGK KHLSELLKRTALHGES IGPRGSGKTMLINHAL K R T G K T 1 2 1 0 0 0 1 4 1 2 2 1 0 0 1 3 1 0 0 1 0 21 2 2148.1763 O43929;C9JGH7;C9J2X8;Q53SE3 O43929 53 73 ORC4;ORC4L Origin recognition complex subunit 4 yes no 4 0.039232 31.389 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 10162000 0 1744300 2202900 1347300 1985100 2882100 6414 725 6509 28497;28498;28499;28500;28501 18825 18825 1 RTAPEDFLGKGPTK KPTRIIRKRTAPEDFL FLGKGPTKKILMGNEE K R T T K K 1 1 0 1 0 0 1 2 0 0 1 2 0 1 2 0 2 0 0 0 0 14 2 1515.8045 Q96FV9 Q96FV9 416 429 THOC1 THO complex subunit 1 yes yes 3 0.0095466 60.968 By matching By matching By matching By MS/MS By matching By matching 1 1 3281600 0 0 1938500 1343200 0 0 6415 1386 6510 28502;28503 18826 18826 1 RTAQEVETYRR QEHPDLARRTAQEVET QEVETYRRSKEITVRG R R T R R S 1 3 0 0 0 1 2 0 0 0 0 0 0 0 0 0 2 0 1 1 0 11 2 1407.7219 P17844 P17844 68 78 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 3 0.012916 78.548 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 56374000 5670900 20216000 0 4474200 8019400 17993000 6416 853 6511 28504;28505;28506;28507;28508 18827;18828 18828 2 RTEALEQGGLPK PALAIKRKRTEALEQG LEQGGLPKKLIF____ K R T P K K 1 1 0 0 0 1 2 2 0 0 2 1 0 0 1 0 1 0 0 0 0 12 1 1297.699 D6R9G1;D6RAD4;P50613 D6R9G1 238 249 CDK7 Cyclin-dependent kinase 7 yes no 3 0.0012001 75.088 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 6485100 733640 0 0 1224900 2329700 2196900 6417 317 6512 28509;28510;28511;28512 18829;18830;18831;18832 18830 4 RTECSVARESQGSSGPEFSCNSFLQEK TSLSSSSKRTECSVAR CNSFLQEKAAAATGGT K R T E K A 1 2 1 0 2 2 4 2 0 0 1 1 0 2 1 6 1 0 0 1 0 27 2 3076.3615 P28356 P28356 190 216 HOXD9 Homeobox protein Hox-D9 yes yes 4 1.3262E-05 56.588 By matching By matching By MS/MS By matching By matching By matching 1 7096200 0 0 7096200 0 0 0 6418 884 6513 28513 18833 18833 1 RTEEGPTLSYGRDGR ILLQLKRRRTEEGPTL LSYGRDGRSATREPPY R R T G R S 0 3 0 1 0 0 2 3 0 0 1 0 0 0 1 1 2 0 1 0 0 15 2 1692.818 P43243;A8MXP9;D6REM6;D6R991 P43243 149 163 MATR3 Matrin-3 yes no 3 0.018275 51.939 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 5128500 0 864670 908510 670020 1044300 1641000 6419 52 6514 28514;28515;28516;28517;28518 18834 18834 1 RTERVEQFLTIAR RRSGRQPKRTERVEQF EQFLTIARRRGRRSMP K R T A R R 1 3 0 0 0 1 2 0 0 1 1 0 0 1 0 0 2 0 0 1 0 13 2 1617.8951 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 70 82 DIDO1 Death-inducer obliterator 1 yes no 4 0.0038543 62.338 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 7906000 0 0 0 2514400 0 5391600 6420 1447 6515 28519;28520 18835;18836 18836 2 RTEVTLETLGPKPAAR TQTSYDAKRTEVTLET LGPKPAARDVNLPRPP K R T A R D 2 2 0 0 0 0 2 1 0 0 2 1 0 0 2 0 3 0 0 1 0 16 2 1737.9737 Q08050-2;Q08050;H0YGS4;Q08050-3 Q08050-2 133 148 FOXM1 Forkhead box protein M1 yes no 3 0.01208 52.372 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 9656400 0 1913500 1825100 557990 1335600 4024300 6421 1046 6516 28521;28522;28523;28524;28525 18837 18837 1 RTFEYEADKNPK VNPVPKPKRTFEYEAD YEADKNPKSKPSNGLP K R T P K S 1 1 1 1 0 0 2 0 0 0 0 2 0 1 1 0 1 0 1 0 0 12 2 1496.726 P78524 P78524 392 403 ST5 Suppression of tumorigenicity 5 protein yes yes 3 0.0056985 83.53 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 2 1 1 1 1 4752800 575190 1033900 664810 440950 806070 1231900 6422 1011 6517 28526;28527;28528;28529;28530;28531;28532 18838;18839;18840;18841 18840 4 RTFGSTSQSSSFSK SALKQDVKRTFGSTSQ SQSSSFSKIHKRPHRI K R T S K I 0 1 0 0 0 1 0 1 0 0 0 1 0 2 0 6 2 0 0 0 0 14 1 1505.711 Q9H582-2;Q9H582;F5GWV4 Q9H582-2 663 676 ZNF644 Zinc finger protein 644 yes no 3 2.6426E-05 92.269 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 23374000 2828200 6836900 3410800 2617700 2839600 4840900 6423 1492 6518 28533;28534;28535;28536;28537;28538;28539 18842;18843;18844;18845;18846;18847;18848 18846 7 RTGFSTSPESPYTHWK IEFTRCHKRTGFSTSP ESPYTHWKQTVFYMED K R T W K Q 0 1 0 0 0 0 1 1 1 0 0 1 0 1 2 3 3 1 1 0 0 16 1 1879.8853 E9PKG1;Q99873-3;Q99873-2;G5E9B6;Q99873;H7C2I1 E9PKG1 252 267 PRMT1 Protein arginine N-methyltransferase 1 yes no 3;4 0.00017824 74.966 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2 16478000 1170400 1346700 969410 0 1956100 11035000 6424 454 6519 28540;28541;28542;28543;28544;28545 18849;18850 18849 2 RTGLGLASLPGPVK KRSLLISRRTGLGLAS ASLPGPVKSYSHAKQL R R T V K S 1 1 0 0 0 0 0 3 0 0 3 1 0 0 2 1 1 0 0 1 0 14 1 1364.814 Q8IWZ8;B4DVK3;Q8IWZ8-2 Q8IWZ8 131 144 SUGP1 SURP and G-patch domain-containing protein 1 yes no 3 0.00071786 83.633 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 9111700 3962500 0 0 3230100 1919000 0 6425 1283 6520 28546;28547;28548 18851;18852;18853 18852 3 RTHSQGGYGSQGYKYNWK MDYVQRVKRTHSQGGY QGYKYNWKLDEARKNL K R T W K L 0 1 1 0 0 2 0 4 1 0 0 2 0 0 0 2 1 1 3 0 0 18 2 2115.9875 B4E363;Q9Y285 B4E363 267 284 FARSA Phenylalanine--tRNA ligase alpha subunit yes no 4 0.028798 35.348 By matching By matching By MS/MS By matching By matching By matching 1 1 1 3630700 0 0 1215400 0 970320 1444900 6426 165 6521 28549;28550;28551 18854 18854 1 RTIAQDYGVLK IPLVSDPKRTIAQDYG AQDYGVLKADEGISFR K R T L K A 1 1 0 1 0 1 0 1 0 1 1 1 0 0 0 0 1 0 1 1 0 11 1 1262.6983 Q06830 Q06830 110 120 PRDX1 Peroxiredoxin-1 yes yes 2;3 0.00013583 103.43 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 2 2 2 2 2 248470000 14941000 45046000 20337000 9021500 43108000 116020000 6427 1044 6522 28552;28553;28554;28555;28556;28557;28558;28559;28560;28561;28562;28563;28564 18855;18856;18857;18858;18859;18860;18861;18862 18857 8 RTIAQDYGVLKADEGISFR IPLVSDPKRTIAQDYG ADEGISFRGLFIIDDK K R T F R G 2 2 0 2 0 1 1 2 0 2 1 1 0 1 0 1 1 0 1 1 0 19 2 2138.112 Q06830 Q06830 110 128 PRDX1 Peroxiredoxin-1 yes yes 3;4 5.8421E-65 122.94 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 1 2 174340000 4419600 55419000 13678000 19313000 4955100 76551000 6428 1044 6523 28565;28566;28567;28568;28569;28570;28571;28572 18863;18864;18865;18866;18867;18868;18869 18863 7 RTIKETDPDYEDVSVALPNK ________________ VSVALPNKRHKAIENS K R T N K R 1 1 1 3 0 0 2 0 0 1 1 2 0 0 2 1 2 0 1 2 0 20 2 2289.1489 Q9ULM3 Q9ULM3 6 25 YEATS2 YEATS domain-containing protein 2 yes yes 3 0.0030035 54.253 By matching By matching By matching By matching By MS/MS By matching 1 3431800 0 0 0 0 3431800 0 6429 1609 6524 28573 18870 18870 1 RTLAEPPAKGLLQPVK GKKASSRKRTLAEPPA KGLLQPVKLSRAELYK K R T V K L 2 1 0 0 0 1 1 1 0 0 3 2 0 0 3 0 1 0 0 1 0 16 2 1717.025 Q9H6R4-4;Q9H6R4;Q9H6R4-2;G8JLK7;Q9H6R4-3 Q9H6R4-4 39 54 NOL6 Nucleolar protein 6 yes no 3;4 0.00080458 75.02 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 108570000 9018600 17289000 38000000 20309000 13479000 10474000 6430 1497 6525 28574;28575;28576;28577;28578;28579;28580;28581;28582;28583;28584;28585 18871;18872;18873;18874;18875;18876;18877;18878;18879 18879 9 RTLEGELHDLRGQVAK LSTALSEKRTLEGELH DLRGQVAKLEAALGEA K R T A K L 1 2 0 1 0 1 2 2 1 0 3 1 0 0 0 0 1 0 0 1 0 16 2 1820.9857 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCJ4;Q5TCI8;H0YAB0 P02545 156 171 LMNA Prelamin-A/C;Lamin-A/C yes no 4 0.0017698 58.885 By matching By matching By matching By matching By matching By MS/MS 1 1 1602100 301280 0 0 0 0 1300800 6431 783 6526 28586;28587 18880 18880 1 RTLPVDSSHGFSSK VILTPNAKRTLPVDSS SSHGFSSKKRKSIKHN K R T S K K 0 1 0 1 0 0 0 1 1 0 1 1 0 1 1 4 1 0 0 1 0 14 1 1516.7634 B4DZN9;Q6P4F7;H3BR51 B4DZN9 139 152 ARHGAP11A Rho GTPase-activating protein 11A yes no 3 7.5424E-05 77.633 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 5013100 0 1697800 1604800 0 0 1710500 6432 147 6527 28588;28589;28590 18881;18882 18882 0 RTLSTSTLRSAK TQQDSSGKRTLSTSTL TSTLRSAKRLRLDTGS K R T A K R 1 2 0 0 0 0 0 0 0 0 2 1 0 0 0 3 3 0 0 0 0 12 2 1319.7521 Q9Y2F5 Q9Y2F5 1835 1846 KIAA0947 Uncharacterized protein KIAA0947 yes yes 3 0.010822 69.864 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 2700900 0 721450 945340 487090 0 547010 6433 1632 6528 28591;28592;28593;28594 18883 18883 1 RTNAENEFVTIK KYEDEINKRTNAENEF ENEFVTIKKDVDGAYM K R T I K K 1 1 2 0 0 0 2 0 0 1 0 1 0 1 0 0 2 0 0 1 0 12 1 1420.731 P04264;CON__P04264 P04264 277 288 KRT1 Keratin, type II cytoskeletal 1 yes no 2;3 1.1187E-26 119.25 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 166590000 7048800 43698000 46415000 14066000 23613000 31750000 + 6434 789 6529 28595;28596;28597;28598;28599;28600;28601;28602;28603;28604;28605;28606 18884;18885;18886;18887;18888;18889;18890;18891;18892;18893;18894;18895 18891 11 RTNAENEFVTIKK KYEDEINKRTNAENEF NEFVTIKKDVDGAYMT K R T K K D 1 1 2 0 0 0 2 0 0 1 0 2 0 1 0 0 2 0 0 1 0 13 2 1548.826 P04264;CON__P04264 P04264 277 289 KRT1 Keratin, type II cytoskeletal 1 yes no 3 1.6403E-73 138.31 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 29729000 3023200 7854600 6645800 4053600 6079000 2073000 + 6435 789 6530 28607;28608;28609;28610;28611;28612 18896;18897 18897 1 RTNPPGGKGSGIFDESTPVQTR EEPQNIPKRTNPPGGK ESTPVQTRQHLNPPGG K R T T R Q 0 2 1 1 0 1 1 4 0 1 0 1 0 1 3 2 3 0 0 1 0 22 2 2300.1509 Q9H910;B4DLH4;H3BU16;Q9H910-2;A6NGP5;H3BMV3;B4DL85;H3BMT0;H3BTV5 Q9H910 60 81 HN1L Hematological and neurological expressed 1-like protein yes no 4 0.038381 42.639 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 9236600 0 2099600 1398200 456690 1482900 3799200 6436 98 6531 28613;28614;28615;28616;28617 18898 18898 0 RTPAPEPEPCEASELPAK PEDIAKEKRTPAPEPE EASELPAKRLRSSEEP K R T A K R 3 1 0 0 1 0 4 0 0 0 1 1 0 0 5 1 1 0 0 0 0 18 1 1977.9466 B7ZAS8;Q9ULV3-3;H0Y5D5;Q9BTG3;Q9ULV3-4;Q9ULV3-2;Q5SYW2;Q9ULV3;F5H2X7;Q96KB7 B7ZAS8 142 159 CIZ1 Cip1-interacting zinc finger protein yes no 3 0.0015231 50.944 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 9020400 0 1739700 2278700 1136200 1587300 2278500 6437 203 6532 28618;28619;28620;28621;28622 18899;18900;18901;18902;18903 18901 5 RTPLEDYSGECFRK PVTVHFNKRTPLEDYS YSGECFRKVCKIHRML K R T R K V 0 2 0 1 1 0 2 1 0 0 1 1 0 1 1 1 1 0 1 0 0 14 2 1756.8203 Q8IY37;F5H3Y4 Q8IY37 446 459 DHX37 Probable ATP-dependent RNA helicase DHX37 yes no 3 0.027343 52.009 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 6586700 1079000 1510600 1432700 1414100 1150200 0 6438 1288 6533 28623;28624;28625;28626;28627 18904 18904 1 RTPSATFQQATKIK EDSLKKIKRTPSATFQ FQQATKIKKLRAGKLS K R T I K K 2 1 0 0 0 2 0 0 0 1 0 2 0 1 1 1 3 0 0 0 0 14 2 1575.8733 Q03164-2;Q03164;E9PQG7;E9PR05;Q9Y6P1 Q03164-2 258 271 KMT2A;MLL Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 3 0.0056409 67.095 By matching By matching By MS/MS By matching By matching By matching 1 1 1 6415100 0 0 2062900 2759800 0 1592500 6439 464 6534 28628;28629;28630 18905 18905 1 RTQQMLHGLQR QEERRWNKRTQQMLHG QMLHGLQRALAKTGAE K R T Q R A 0 2 0 0 0 3 0 1 1 0 2 0 1 0 0 0 1 0 0 0 0 11 1 1366.7252 O60216;E5RI01;E5RFZ5;B3KUT8 O60216 559 569 RAD21 Double-strand-break repair protein rad21 homolog yes no 3 0.029966 43.68 By matching By matching By matching By matching By matching By MS/MS 1 954220 0 0 0 0 0 954220 6440 726 6535 28631 18906 18906 1 RTSLSAEDAEVTK DLLFMSHKRTSLSAED AEDAEVTKAFEEDIET K R T T K A 2 1 0 1 0 0 2 0 0 0 1 1 0 0 0 2 2 0 0 1 0 13 1 1405.7049 Q9P2D1 Q9P2D1 2531 2543 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 3 0.00055718 90.707 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 4470200 542310 595670 648160 398040 864190 1421900 6441 1578 6536 28632;28633;28634;28635;28636;28637 18907;18908;18909 18907 3 RTSSAQVEGGVHSLHSYEK SGELKFEKRTSSAQVE HSLHSYEKRLF_____ K R T E K R 1 1 0 0 0 1 2 2 2 0 1 1 0 0 0 4 1 0 1 2 0 19 1 2071.0083 H0Y4R1;P12268 H0Y4R1 449 467 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes no 3 0.00051256 60.938 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 2055800 1053400 0 0 1002300 0 0 6442 610 6537 28638;28639 18910;18911;18912 18910 3 RTTSPSSDTDLLDRSASK GLVDKSGKRTTSPSSD LLDRSASKTELKAIAH K R T S K T 1 2 0 3 0 0 0 0 0 0 2 1 0 0 1 5 3 0 0 0 0 18 2 1935.9498 Q96QT6-2;Q96QT6-3;C9J9G2;Q96QT6 Q96QT6-2 128 145 PHF12 PHD finger protein 12 yes no 3 0.0071568 52.52 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 2564400 0 1617200 947200 0 0 0 6443 237 6538 28640;28641 18913;18914 18913 2 RTVDLSSHLAK PLINEDVKRTVDLSSH DLSSHLAKVTAEVVLA K R T A K V 1 1 0 1 0 0 0 0 1 0 2 1 0 0 0 2 1 0 0 1 0 11 1 1225.6779 F8WF32;F5H6I5;P04843 F8WF32 38 48 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes no 3 0.0055807 63.966 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 3046200 856550 0 1324200 865410 0 0 6444 523 6539 28642;28643;28644 18915;18916 18916 2 RTVIEDCNKVQEK HEDVKQYKRTVIEDCN DCNKVQEKRGAVYERV K R T E K R 0 1 1 1 1 1 2 0 0 1 0 2 0 0 0 0 1 0 0 2 0 13 2 1617.8145 Q9BZD4;E9PQC4 Q9BZD4 371 383 NUF2 Kinetochore protein Nuf2 yes no 3 0.0069705 67.095 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 5478400 666800 1105900 1191800 405880 655290 1452700 6445 1470 6540 28645;28646;28647;28648;28649;28650 18917 18917 1 RTVLEGSTASTSPADHSALPNQSLTVR DVIPLFDKRTVLEGST PNQSLTVRESEVLKTS K R T V R E 3 2 1 1 0 1 1 1 1 0 3 0 0 0 2 5 4 0 0 2 0 27 1 2794.4209 Q8NFC6 Q8NFC6 1307 1333 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 4 8.9708E-15 76.818 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 12683000 4740800 3673400 0 0 0 4268800 6446 1325 6541 28651;28652;28653 18918;18919;18920 18918 2 RTVTAAGAENIQQK ISSDRGKKRTVTAAGA GAENIQQKTDEKVDES K R T Q K T 3 1 1 0 0 2 1 1 0 1 0 1 0 0 0 0 2 0 0 1 0 14 1 1485.79 Q29RF7 Q29RF7 1239 1252 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 3 1.7331E-08 99.834 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 42930000 4589000 6659400 5597700 3801500 9867400 12415000 6447 1159 6542 28654;28655;28656;28657;28658;28659 18921;18922;18923;18924;18925;18926 18922 6 RTVTAAGAENIQQKTDEK ISSDRGKKRTVTAAGA IQQKTDEKVDESGPPA K R T E K V 3 1 1 1 0 2 2 1 0 1 0 2 0 0 0 0 3 0 0 1 0 18 2 1959.0021 Q29RF7 Q29RF7 1239 1256 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 3 1.8208E-132 148.52 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 45298000 11525000 3219700 9481500 12261000 5464500 3346800 6448 1159 6543 28660;28661;28662;28663;28664;28665;28666 18927;18928;18929;18930;18931;18932;18933;18934 18932 8 RVAIFIEKTK YDCELVPRRVAIFIEK AIFIEKTKDGQILPVP R R V T K D 1 1 0 0 0 0 1 0 0 2 0 2 0 1 0 0 1 0 0 1 0 10 2 1203.7339 Q9P258 Q9P258 311 320 RCC2 Protein RCC2 yes yes 3 0.029901 75.566 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 25746000 0 0 2800100 3827000 4845500 14274000 6449 1575 6544 28667;28668;28669;28670 18935;18936;18937 18935 3 RVCEEIAIIPSK GNDFHTNKRVCEEIAI EIAIIPSKKLRNKIAG K R V S K K 1 1 0 0 1 0 2 0 0 3 0 1 0 0 1 1 0 0 0 1 0 12 1 1413.765 H0YN73;P0CW22;P08708;H0YN88;H0YK46 H0YN73 32 43 RPS17L;RPS17 40S ribosomal protein S17-like;40S ribosomal protein S17 yes no 3 0.00085356 90.412 By matching By matching By matching By matching By matching By MS/MS 1 1 2462600 0 813200 0 0 0 1649400 6450 625 6545 28671;28672 18938 18938 1 RVEIFHETGK VGSMAHPRRVEIFHET EIFHETGKRVHSFGGE R R V G K R 0 1 0 0 0 0 2 1 1 1 0 1 0 1 0 0 1 0 0 1 0 10 1 1214.6408 Q9H967 Q9H967 573 582 WDR76 WD repeat-containing protein 76 yes yes 3 0.0016155 91.701 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 4468100 0 0 0 605590 1926300 1936200 6451 1504 6546 28673;28674;28675 18939;18940 18940 2 RVGIVAWHPTAR VILEGHSKRVGIVAWH VAWHPTARNVLLSAGC K R V A R N 2 2 0 0 0 0 0 1 1 1 0 0 0 0 1 0 1 1 0 2 0 12 1 1361.768 Q9ULV4;A7MAP0;B4E3S0;F8W1H8;F8VUX3;F8VSA4;F8VRE9;F8VTT6;F8VVB7;F8VV53 Q9ULV4 132 143 CORO1C Coronin-1C;Coronin yes no 3 0.006088 57.52 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 22983000 0 0 3386100 0 1712900 17884000 6452 33 6547 28676;28677;28678 18941;18942;18943 18942 3 RVGLSGAPADACSTAQK VSDEECLKRVGLSGAP DACSTAQKAVGYICKC K R V Q K A 4 1 0 1 1 1 0 2 0 0 1 1 0 0 1 2 1 0 0 1 0 17 1 1687.8312 Q8NFW8 Q8NFW8 383 399 CMAS N-acylneuraminate cytidylyltransferase yes yes 3 8.7975E-08 89.502 By MS/MS By matching By matching By MS/MS By matching By MS/MS 2 1 1 1 1 10869000 1714600 2773700 1293900 754770 0 4331600 6453 1327 6548 28679;28680;28681;28682;28683;28684 18944;18945;18946 18945 3 RVHSGEKPYQCER KYHLERHKRVHSGEKP EKPYQCERCHQCFSRT K R V E R C 0 2 0 0 1 1 2 1 1 0 0 1 0 0 1 1 0 0 1 1 0 13 2 1644.7791 Q8NDX6 Q8NDX6 149 161 ZNF740 Zinc finger protein 740 yes yes 4 0.0023272 64.827 By matching By matching By MS/MS By matching By matching By matching 1 1 1067300 0 0 971540 0 95768 0 6454 1320 6549 28685;28686 18947 18947 1 RVIERPPLTQQQAAQK LAMSTRPRRVIERPPL TQQQAAQKRTCDSITP R R V Q K R 2 2 0 0 0 4 1 0 0 1 1 1 0 0 2 0 1 0 0 1 0 16 2 1862.0486 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;Q76FK4-3;F5GWN9;F5H540 F5H101 241 256 NOL8 Nucleolar protein 8 yes no 3 0.010638 53.3 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1567800 1208400 0 0 0 213560 145830 6455 27 6550 28687;28688;28689 18948 18948 1 RVIISAPSADAPMFVMGVNHEK AHLQGGAKRVIISAPS VMGVNHEKYDNSLKII K R V E K Y 3 1 1 1 0 0 1 1 1 2 0 1 2 1 2 2 0 0 0 3 0 22 1 2368.2032 P04406;E7EUT5;E7EUT4;E7EU54 P04406 118 139 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 3 0.00019367 58.712 By matching By matching By matching By MS/MS By matching By matching 1 1 13609000 0 11111000 0 2497900 0 0 6456 791 6551 28690;28691 18949 18949 78 1 RVKGGQPISPNGQDPEDGDSTASPSSE QNRRMKWKRVKGGQPI STASPSSE________ K R V S E - 1 1 1 3 0 2 2 4 0 1 0 1 0 0 4 5 1 0 0 1 0 27 2 2711.2271 P50221;A8MWF9;F8VXS6 P50221 228 254 MEOX1 Homeobox protein MOX-1 yes no 3 7.3971E-09 62.193 By matching By matching By MS/MS By matching By matching By matching 1 1 1 16673000 0 3855500 7967000 0 0 4850700 6457 948 6552 28692;28693;28694 18950 18950 1 RVLLQASQDENFGNTTPR ARKQSAQKRVLLQASQ NFGNTTPRNQVIPRTP K R V P R N 1 2 2 1 0 2 1 1 0 0 2 0 0 1 1 1 2 0 0 1 0 18 1 2045.029 P57740;G3V1T4 P57740 31 48 NUP107 Nuclear pore complex protein Nup107 yes no 3 2.4628E-14 99.011 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 11065000 2630700 0 1248800 773480 1841300 4570900 6458 975 6553 28695;28696;28697;28698;28699 18951;18952;18953 18953 3 RVLLQASQDENFGNTTPRNQVIPR ARKQSAQKRVLLQASQ PRNQVIPRTPSSFRQP K R V P R T 1 3 3 1 0 3 1 1 0 1 2 0 0 1 2 1 2 0 0 2 0 24 2 2752.4369 P57740;G3V1T4 P57740 31 54 NUP107 Nuclear pore complex protein Nup107 yes no 4 3.1173E-07 61.276 By matching By matching By matching By MS/MS By matching By matching 1 1 3905100 0 2326600 0 1578500 0 0 6459 975 6554 28700;28701 18954 18954 1 RVNDSDDLIMTENEVGK SLKEILWKRVNDSDDL MTENEVGKIALHIEKE K R V G K I 0 1 2 3 0 0 2 1 0 1 1 1 1 0 0 1 1 0 0 2 0 17 1 1933.9051 Q9BTC0;Q9BTC0-1 Q9BTC0 685 701 DIDO1 Death-inducer obliterator 1 yes no 3 0.005643 42.633 By matching By matching By matching By matching By matching By MS/MS 1 1 1 9463900 873810 0 4948600 0 0 3641500 6460 1447 6555 28702;28703;28704 18955 18955 1 RVNILSDMHLR SASEATVKRVNILSDM ILSDMHLRSIRTKLML K R V L R S 0 2 1 1 0 0 0 0 1 1 2 0 1 0 0 1 0 0 0 1 0 11 1 1352.7347 P51114-3;B4DXZ6;P51114;E7EU85;E9PFF5;P51114-2;C9JZE0;C9JY20 P51114-3 95 105 FXR1 Fragile X mental retardation syndrome-related protein 1 yes no 3 9.4369E-05 99.539 By matching By matching By matching By matching By matching By MS/MS 1 3453000 0 0 0 0 0 3453000 6461 140 6556 28705 18956 18956 1 RVNLSHQLNNIK VEFKKKRKRVNLSHQL SHQLNNIKTENEAPIE K R V I K T 0 1 3 0 0 1 0 0 1 1 2 1 0 0 0 1 0 0 0 1 0 12 1 1434.8055 Q96QE3;Q96QE3-2 Q96QE3 116 127 ATAD5 ATPase family AAA domain-containing protein 5 yes no 3 0.0012493 74.698 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 10948000 0 1524300 1859700 0 1814500 5749100 6462 1415 6557 28706;28707;28708;28709 18957;18958;18959;18960 18957 4 RVNSASSSNPPAEVDPDTILK KKESELPRRVNSASSS VDPDTILKALFKSSGA R R V L K A 2 1 2 2 0 0 1 0 0 1 1 1 0 0 3 4 1 0 0 2 0 21 1 2196.1022 Q9BY77;Q9BY77-2 Q9BY77 380 400 POLDIP3 Polymerase delta-interacting protein 3 yes no 3 0.021603 31.767 By matching By matching By matching By matching By matching By MS/MS 1 4172600 0 0 0 0 0 4172600 6463 1465 6558 28710 18961 18961 1 RVPSNASWEQAMK FKELLKEKRVPSNASW ASWEQAMKMIINDPRY K R V M K M 2 1 1 0 0 1 1 0 0 0 0 1 1 0 1 2 0 1 0 1 0 13 1 1502.73 E9PHJ7;O75400-2;O75400-3;F8W9L2;O75400;F5H578 E9PHJ7 277 289 PRPF40A Pre-mRNA-processing factor 40 homolog A yes no 3 2.9345E-60 133.98 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 8631100 533100 2063100 790240 0 1924200 3320600 6464 438 6559 28711;28712;28713;28714;28715 18962 18962 1 RVPSPTPAPKEAVR VQPEVALKRVPSPTPA PAPKEAVREGRPPEPT K R V V R E 2 2 0 0 0 0 1 0 0 0 0 1 0 0 4 1 1 0 0 2 0 14 2 1503.8522 Q9UQ35;F5GWZ7;Q9UQ35-2 Q9UQ35 2578 2591 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3 0.017407 55.724 By MS/MS By matching By matching By matching By matching By matching 1 805260 805260 0 0 0 0 0 6465 1623 6560 28716 18963 18963 1 RVQDPLAELVK RSAVSIARRVQDPLAE DPLAELVKIEPKHIGV R R V V K I 1 1 0 1 0 1 1 0 0 0 2 1 0 0 1 0 0 0 0 2 0 11 1 1266.7296 Q8N5C6;Q8N5C6-2;B7Z6X7 Q8N5C6 661 671 SRBD1 S1 RNA-binding domain-containing protein 1 yes no 2 1.1217E-85 150.06 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 57461000 0 19301000 0 0 0 38161000 6466 1302 6561 28717;28718 18964;18965 18965 2 RVQLAEDLKK KIKLLTGKRVQLAEDL QLAEDLKKVREIQEKL K R V K K V 1 1 0 1 0 1 1 0 0 0 2 2 0 0 0 0 0 0 0 1 0 10 2 1198.7034 O60313;E5KLK1;E5KLJ6;E5KLJ9;O60313-2;E5KLJ5;H7C141 O60313 932 941 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 3 0.013191 88.134 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 8011700 0 1718000 0 1587000 1430100 3276500 6467 336 6562 28719;28720;28721;28722 18966;18967 18966 2 RVSISEGDDKIEYR GESVYGEKRVSISEGD GDDKIEYRAWNPFRSK K R V Y R A 0 2 0 2 0 0 2 1 0 2 0 1 0 0 0 2 0 0 1 1 0 14 2 1665.8322 P22087 P22087 122 135 FBL rRNA 2-O-methyltransferase fibrillarin yes yes 3 2.0512E-29 116.58 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 45544000 4117700 2312900 2852900 3919500 19426000 12916000 6468 862 6563 28723;28724;28725;28726;28727;28728 18968;18969;18970;18971;18972;18973 18969 6 RVSISRSQHDILQMICSK KSGNLPSKRVSISRSQ ILQMICSKRRSGASEA K R V S K R 0 2 0 1 1 2 0 0 1 3 1 1 1 0 0 4 0 0 0 1 0 18 2 2157.1147 P46013;F5H4V4;P46013-2;E7EN66 P46013 628 645 MKI67 Antigen KI-67 no no 4 0.030342 35.133 By matching By matching By matching By MS/MS By matching By matching 1 40632000 0 0 0 40632000 0 0 6469 919;920 6564 28729 18974 18974 1 RVSLEPHQGPGTPESK ITTRQQRKRVSLEPHQ GPGTPESKKATSCFPR K R V S K K 0 1 0 0 0 1 2 2 1 0 1 1 0 0 3 2 1 0 0 1 0 16 1 1717.8747 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9 Q14980-2 1975 1990 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3;4 2.0657E-164 159.34 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 1 2 2 3 203220000 37642000 34296000 34251000 22918000 36230000 37881000 6470 1121 6565 28730;28731;28732;28733;28734;28735;28736;28737;28738;28739;28740;28741;28742;28743 18975;18976;18977;18978;18979;18980;18981;18982 18976 8 RVSLEPHQGPGTPESKK ITTRQQRKRVSLEPHQ PGTPESKKATSCFPRP K R V K K A 0 1 0 0 0 1 2 2 1 0 1 2 0 0 3 2 1 0 0 1 0 17 2 1845.9697 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9 Q14980-2 1975 1991 NUMA1 Nuclear mitotic apparatus protein 1 yes no 4 0.0094009 50.252 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 11512000 0 1438600 1346400 1120700 1924300 5681900 6471 1121 6566 28744;28745;28746;28747;28748 18983;18984 18983 1 RVVGCLIAEPIK FLFISDEKRVVGCLIA CLIAEPIKQAFRVLSE K R V I K Q 1 1 0 0 1 0 1 1 0 2 1 1 0 0 1 0 0 0 0 2 0 12 1 1353.7802 Q56NI9;Q49AP4 Q56NI9 487 498 ESCO2 N-acetyltransferase ESCO2 yes no 3 0.019326 45.28 By matching By matching By matching By matching By matching By MS/MS 1 1360400 0 0 0 0 0 1360400 6472 1176 6567 28749 18985 18985 1 RVVHLGVGTPGR AQVKLLEKRVVHLGVG LGVGTPGRIKELVKQG K R V G R I 0 2 0 0 0 0 0 3 1 0 1 0 0 0 1 0 1 0 0 3 0 12 1 1246.7258 C9J384;E9PHS3;Q9BQ75 C9J384 160 171 CMSS1 Protein CMSS1 yes no 3 0.00096751 85.672 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 9714900 612150 0 660310 551740 3783600 4107000 6473 225 6568 28750;28751;28752;28753;28754 18986;18987;18988;18989 18988 4 RVVSEDTSHYILIK FLKEVESRRVVSEDTS TSHYILIKGIQAKTVA R R V I K G 0 1 0 1 0 0 1 0 1 2 1 1 0 0 0 2 1 0 1 2 0 14 1 1658.8992 F8WDY3;P28715;I3L0G8 F8WDY3 112 125 ERCC5 DNA repair protein complementing XP-G cells yes no 3 9.8912E-06 94.09 By matching By matching By matching By matching By matching By MS/MS 1 1 1575500 0 0 472870 0 0 1102600 6474 571 6569 28755;28756 18990 18990 1 RWECPALPQGWER ________________ ALPQGWEREEVPRRSG K R W E R E 1 2 0 0 1 1 2 1 0 0 1 0 0 0 2 0 0 2 0 0 0 13 1 1683.794 O95983 O95983 5 17 MBD3 Methyl-CpG-binding domain protein 3 yes yes 3 0.032069 37.654 By matching By MS/MS By matching By matching By matching By matching 1 7282800 0 7282800 0 0 0 0 6475 776 6570 28757 18991 18991 1 RWEFCDIPR CFTTDPQKRWEFCDIP WEFCDIPRCTTPPPSS K R W P R C 0 2 0 1 1 0 1 0 0 1 0 0 0 1 1 0 0 1 0 0 0 9 1 1277.5975 CON__P06868 CON__P06868 260 268 yes yes 3 0.0054161 101.38 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 12751000 4427600 0 0 0 0 8323800 + 6476 295 6571 28758;28759 18992;18993 18992 2 RWEFCDIPRCTTPPPSSGPK CFTTDPQKRWEFCDIP PPPSSGPKYQCLKGTG K R W P K Y 0 2 0 1 2 0 1 1 0 1 0 1 0 1 5 2 2 1 0 0 0 20 2 2387.1151 CON__P06868 CON__P06868 260 279 yes yes 3;4 3.9132E-38 110.77 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 430930000 125320000 29068000 79616000 77513000 33282000 86125000 + 6477 295 6572 28760;28761;28762;28763;28764;28765;28766;28767;28768;28769;28770;28771 18994;18995;18996;18997;18998;18999;19000;19001;19002;19003 18997 10 RYDALSEHNLK VECNFLTKRYDALSEH ALSEHNLKYHPGEENF K R Y L K Y 1 1 1 1 0 0 1 0 1 0 2 1 0 0 0 1 0 0 1 0 0 11 1 1344.6786 Q9UKY1 Q9UKY1 113 123 ZHX1 Zinc fingers and homeoboxes protein 1 yes yes 3 7.2059E-05 100.04 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 13775000 957120 1843700 1985400 895570 3058400 5034700 6478 1604 6573 28772;28773;28774;28775;28776;28777 19004;19005;19006 19005 3 RYDYCDIPECEDK CYTTDPDKRYDYCDIP DIPECEDKCMHCSGEN K R Y D K C 0 1 0 3 2 0 2 0 0 1 0 1 0 0 1 0 0 0 2 0 0 13 1 1761.6974 CON__P06868 CON__P06868 179 191 yes yes 3 0.0011549 69.92 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 12431000 0 4958100 2500000 1893600 3079700 0 + 6479 295 6574 28778;28779;28780;28781 19007;19008;19009;19010;19011 19010 5 RYESHPVCADLQAK EEVEAKFKRYESHPVC VCADLQAKILQCYREN K R Y A K I 2 1 0 1 1 1 1 0 1 0 1 1 0 0 1 1 0 0 1 1 0 14 1 1672.7991 Q9NX63;C9JRZ6 Q9NX63 176 189 CHCHD3 Coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial yes no 3 0.00062819 70.68 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 3687300 0 380160 0 2164600 1142600 0 6480 268 6575 28782;28783;28784;28785 19012;19013;19014 19012 3 RYGPMEEPLVIEK DKNGCVVKRYGPMEEP EEPLVIEKDLPHYF__ K R Y E K D 0 1 0 0 0 0 3 1 0 1 1 1 1 0 2 0 0 0 1 1 0 13 1 1559.8018 P36969-2;P36969 P36969-2 152 164 GPX4 Phospholipid hydroperoxide glutathione peroxidase, mitochondrial yes no 2;3 1.5648E-24 116.9 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 2 114110000 43511000 27217000 0 43387000 0 0 6481 902 6576 28786;28787;28788;28789 19015;19016;19017;19018 19017 4 RYIGIVKQAGLER YDRPGTARRYIGIVKQ VKQAGLERMRPGAYST R R Y E R M 1 2 0 0 0 1 1 2 0 2 1 1 0 0 0 0 0 0 1 1 0 13 2 1501.8729 P52597;B4DKS8 P52597 218 230 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 3 0.0051081 74.475 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 16833000 7981500 1894900 4013300 2303100 640700 0 6482 958 6577 28790;28791;28792;28793;28794 19019;19020 19020 2 RYLDYEKQHGTEK KRMKFFFKRYLDYEKQ EKQHGTEKDVQAVKAK K R Y E K D 0 1 0 1 0 1 2 1 1 0 1 2 0 0 0 0 1 0 2 0 0 13 2 1665.8111 Q14690 Q14690 1837 1849 PDCD11 Protein RRP5 homolog yes yes 4 0.0014545 74.537 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 3618300 0 0 775520 661970 1122800 1058000 6483 1112 6578 28795;28796;28797;28798 19021;19022 19022 2 SAAAEAPTDDQPTDLSLPKNPHKPTGK SLHLQDKKSAAAEAPT NPHKPTGKVLGLAHST K S A G K V 4 0 1 3 0 1 1 1 1 0 2 3 0 0 5 2 3 0 0 0 0 27 2 2785.3883 Q14865-2;Q14865 Q14865-2 651 677 ARID5B AT-rich interactive domain-containing protein 5B yes no 4 0.0034591 36.316 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 2909300 0 1312800 1596500 0 0 0 6484 1117 6579 28799;28800 19023;19024;19025 19024 3 SAADARYEAACNR KIQTREGKSAADARYE RYEAACNRLANKAVQR K S A N R L 5 2 1 1 1 0 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 13 1 1453.6368 Q9H0C8 Q9H0C8 357 369 ILKAP Integrin-linked kinase-associated serine/threonine phosphatase 2C yes yes 3 0.01641 50.95 By matching By matching By matching By matching By matching By MS/MS 1 370350 0 0 0 0 0 370350 6485 1478 6580 28801 19026 19026 1 SAADEVDGLGVARPHYGSVLDNER ________________ GSVLDNERLTAEEMDE M S A E R L 3 2 1 3 0 0 2 3 1 0 2 0 0 0 1 2 0 0 1 3 0 24 1 2526.2099 P46940;H0YLE8 P46940 2 25 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 3 6.1153E-40 101.48 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 34554000 0 18337000 0 0 0 16217000 6486 929 6581 28802;28803 19027;19028 19027 2 SAAEPVASTPASR GATANRLRSAAEPVAS VASTPASRIQPAGNTS R S A S R I 4 1 0 0 0 0 1 0 0 0 0 0 0 0 2 3 1 0 0 1 0 13 0 1242.6204 P49674;H0Y5S9;H0Y682 P49674 343 355 CSNK1E Casein kinase I isoform epsilon yes no 2 0.0011454 90.412 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 46303000 2852300 8167400 6459500 2044300 5893100 20886000 6487 939 6582 28804;28805;28806;28807;28808;28809;28810 19029;19030;19031;19032;19033;19034;19035 19030 7 SAAGYPDYYCK IIAHSNQKSAAGYPDY GYPDYYCKWQGLPYSE K S A C K W 2 0 0 1 1 0 0 1 0 0 0 1 0 0 1 1 0 0 3 0 0 11 0 1293.5336 O14646-2;O14646 O14646-2 402 412 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes no 2 0.0169 57.885 By matching By MS/MS By matching By matching By matching By matching 1 1 896800 0 273260 0 0 0 623550 6488 695 6583 28811;28812 19036 19036 1 SAALLRR ________________ MSAALLRRGLELLAAS M S A R R G 2 2 0 0 0 0 0 0 0 0 2 0 0 0 0 1 0 0 0 0 0 7 1 785.48717 Q86WX3;F8WFE7 Q86WX3 2 8 RPS19BP1 Active regulator of SIRT1 yes no 2 0.015859 69.176 By matching By matching By matching By matching By MS/MS By matching 1 0 0 0 0 0 0 0 6489 1269 6584 28813 19037 19037 1 SAAMTLNER HVKEQYFKSAAMTLNE AAMTLNERFTSYQKAT K S A E R F 2 1 1 0 0 0 1 0 0 0 1 0 1 0 0 1 1 0 0 0 0 9 0 991.47568 Q9NYF8-2;Q9NYF8;Q9NYF8-4;E9PK09;E9PQN2;E9PKI6;Q9NYF8-3;E9PK91 Q9NYF8-2 621 629 BCLAF1 Bcl-2-associated transcription factor 1 no no 2 0.0012891 107.21 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 24120000 1942000 2367000 7326700 4402800 2503800 5577100 6490 1563;452 6585 28814;28815;28816;28817;28818;28819 19038;19039;19040;19041;19042;19043 19041 6 SAAMTLNERFTSYQK HVKEQYFKSAAMTLNE ERFTSYQKATEEHSTR K S A Q K A 2 1 1 0 0 1 1 0 0 0 1 1 1 1 0 2 2 0 1 0 0 15 1 1745.8407 Q9NYF8-2;Q9NYF8;Q9NYF8-4;E9PK09;E9PQN2;E9PKI6;Q9NYF8-3;E9PK91 Q9NYF8-2 621 635 BCLAF1 Bcl-2-associated transcription factor 1 no no 2;3 2.596E-32 119 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 71582000 54031000 3481400 3087400 8348600 486800 2147200 6491 1563;452 6586 28820;28821;28822;28823;28824;28825;28826 19044;19045;19046;19047;19048;19049 19048 6 SAAPSQLQGNSFKKPK ________________ GNSFKKPKFIPPGRSN R S A P K F 2 0 1 0 0 2 0 1 0 0 1 3 0 1 2 3 0 0 0 0 0 16 2 1686.9053 Q9Y620;E5RJF7;F6WBS8;E5RI14;E5RHN9 Q9Y620 4 19 RAD54B DNA repair and recombination protein RAD54B yes no 4 0.0040621 51.03 By matching By matching By matching By matching By matching By MS/MS 1 938260 0 0 0 0 0 938260 6492 1660 6587 28827 19050 19050 1 SAAPSSVPAAPPGPEPR ETPAPAARSAAPSSVP APPGPEPRVVRRRGLQ R S A P R V 4 1 0 0 0 0 1 1 0 0 0 0 0 0 6 3 0 0 0 1 0 17 0 1586.8053 Q1W6H9 Q1W6H9 174 190 FAM110C Protein FAM110C yes yes 2 0.0014626 74.428 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3585400 0 974000 1078000 0 259980 1273400 6493 1158 6588 28828;28829;28830;28831 19051 19051 1 SAAPSTLDSSSTAPAQLGK LNTLRVTRSAAPSTLD TAPAQLGKKGKEFEFS R S A G K K 4 0 0 1 0 1 0 1 0 0 2 1 0 0 2 5 2 0 0 0 0 19 0 1787.8901 H7C4H2;Q9Y5M8 H7C4H2 98 116 SRPRB Signal recognition particle receptor subunit beta yes no 2 0.00014412 82.01 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 7283000 1639100 2379000 1065400 0 0 2199400 6494 672 6589 28832;28833;28834;28835 19052;19053;19054 19053 3 SAAQAAAQTNSNAAGK GVGGPGAKSAAQAAAQ TNSNAAGKQLRKESQK K S A G K Q 7 0 2 0 0 2 0 1 0 0 0 1 0 0 0 2 1 0 0 0 0 16 0 1459.7015 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51 53 68 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein no no 2;3 0.0010964 69.485 By matching By matching By MS/MS By matching By matching By MS/MS 2 1 1 18195000 0 13009000 2406000 0 0 2780300 6495 1316;1317 6590 28836;28837;28838;28839 19055;19056;19057 19055 3 SAAQAAAQTNSNAAGKQLR GVGGPGAKSAAQAAAQ NAAGKQLRKESQKDRK K S A L R K 7 1 2 0 0 3 0 1 0 0 1 1 0 0 0 2 1 0 0 0 0 19 1 1856.9453 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51 53 71 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein no no 3 0.00059188 76.051 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 4172300 0 0 1843300 990350 430250 908320 6496 1316;1317 6591 28840;28841;28842;28843 19058;19059 19058 2 SAAVSEQQQLEQK LEENLRSRSAAVSEQQ EQQQLEQKTLEVEKRS R S A Q K T 2 0 0 0 0 4 2 0 0 0 1 1 0 0 0 2 0 0 0 1 0 13 0 1444.7158 E7EVK1;O75376;B4DJ25 E7EVK1 1761 1773 NCOR1 Nuclear receptor corepressor 1 yes no 2 1.0542E-34 122.52 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 5049900 200120 824640 1354000 530180 621480 1519500 6497 390 6592 28844;28845;28846;28847;28848;28849 19060;19061;19062;19063;19064;19065 19063 6 SACGVCPGRLR KKVGKAPKSACGVCPG GVCPGRLRGVRAVRPK K S A L R G 1 2 0 0 2 0 0 2 0 0 1 0 0 0 1 1 0 0 0 1 0 11 1 1231.5914 P49207 P49207 44 54 RPL34 60S ribosomal protein L34 yes yes 3 0.011458 63.426 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 3056600 466100 0 0 0 880770 1709800 6498 933 6593 28850;28851;28852 19066;19067 19067 2 SADEGQTVFYTCTNCK AYHTRQMRSADEGQTV FYTCTNCKFQEKEDS_ R S A C K F 1 0 1 1 2 1 1 1 0 0 0 1 0 1 0 1 3 0 1 1 0 16 0 1879.7717 Q9P1U0 Q9P1U0 104 119 ZNRD1 DNA-directed RNA polymerase I subunit RPA12 yes yes 2 0.0020877 60.158 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 6968900 1201300 1469700 605740 0 1658900 2033300 6499 1574 6594 28853;28854;28855;28856;28857 19068;19069 19068 2 SAEEAYKQQIK SRNEIQGRSAEEAYKQ EAYKQQIKEDNIGNQL R S A I K E 2 0 0 0 0 2 2 0 0 1 0 2 0 0 0 1 0 0 1 0 0 11 1 1293.6565 O15226;G3V1N1 O15226 540 550 NKRF NF-kappa-B-repressing factor yes no 2;3 0.0013267 92.239 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 14857000 2145000 2891700 1681500 1246400 3219700 3672700 6500 578 6595 28858;28859;28860;28861;28862;28863;28864;28865;28866;28867;28868;28869 19070;19071;19072;19073;19074;19075 19070 6 SAEEVEEIKAEK EIDDFKGRSAEEVEEI VEEIKAEKEAKTQAIL R S A E K E 2 0 0 0 0 0 5 0 0 1 0 2 0 0 0 1 0 0 0 1 0 12 1 1360.6722 Q8WUA2 Q8WUA2 204 215 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 2 5.0176E-06 93.623 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 992300 0 0 338970 0 0 653320 6501 1339 6596 28870;28871;28872 19076;19077 19077 2 SAELSGEFPKEPR SNEVKYEKSAELSGEF GEFPKEPREKQKEGHS K S A P R E 1 1 0 0 0 0 3 1 0 0 1 1 0 1 2 2 0 0 0 0 0 13 1 1445.7151 Q9BY89 Q9BY89 529 541 KIAA1671 Uncharacterized protein KIAA1671 yes yes 3 0.0013956 75.89 By matching By matching By matching By matching By matching By MS/MS 1 1 3334700 0 1395800 0 0 0 1938900 6502 1466 6597 28873;28874 19078 19078 1 SAESCATWKVQK EKKVHSERSAESCATW CATWKVQKEEKLIGLM R S A Q K E 2 0 0 0 1 1 1 0 0 0 0 2 0 0 0 2 1 1 0 1 0 12 1 1393.666 Q86Y07-4;Q86Y07-3;Q86Y07;Q86Y07-5;Q86Y07-2;E9PFA9 Q86Y07-4 251 262 VRK2 Serine/threonine-protein kinase VRK2 yes no 3 0.016357 54.005 By matching By matching By matching By matching By MS/MS By matching 1 1 1739200 0 0 1042900 0 696310 0 6503 1271 6598 28875;28876 19079 19079 1 SAESPSWTPAEHVAK KPVRAKSKSAESPSWT TPAEHVAKRIESRHSA K S A A K R 3 0 0 0 0 0 2 0 1 0 0 1 0 0 2 3 1 1 0 1 0 15 0 1595.758 Q13415 Q13415 196 210 ORC1 Origin recognition complex subunit 1 yes yes 2;3 6.2046E-44 124.81 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 131630000 12289000 21948000 22717000 14969000 20946000 38757000 6504 1080 6599 28877;28878;28879;28880;28881;28882;28883;28884;28885;28886;28887 19080;19081;19082;19083;19084;19085;19086;19087;19088;19089 19083 9 SAFLCGVMK DLSHVQNKSAFLCGVM AFLCGVMKTYRQREKQ K S A M K T 1 0 0 0 1 0 0 1 0 0 1 1 1 1 0 1 0 0 0 1 0 9 0 1011.4882 O43390;O43390-2;Q2L7G6;F6UXX1;O60506-2;O60506;O60506-4;O60506-3 O60506-2 92 100 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 2 0.0089047 86.67 By matching By matching By matching By MS/MS By matching By matching 1 4640200 0 0 0 4640200 0 0 6505 731;715 6600 28888 19090;19091 19091 2 SAFRDGTAEVETR QHRQSLVRSAFRDGTA GTAEVETREKEPPGWG R S A T R E 2 2 0 1 0 0 2 1 0 0 0 0 0 1 0 1 2 0 0 1 0 13 1 1437.6848 F5H0P9;Q9HAW0 F5H0P9 287 299 BRF2 Transcription factor IIIB 50 kDa subunit yes no 3 0.0052067 61.167 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2765900 0 0 458130 0 305540 2002200 6506 504 6601 28889;28890;28891 19092 19092 1 SAGAGQGSSNSVSDTGAHGVQGSSAR DSAQSKSKSAGAGQGS GVQGSSARTPSSPHKK K S A A R T 4 1 1 1 0 2 0 6 1 0 0 0 0 0 0 7 1 0 0 2 0 26 0 2331.0436 H0Y3R4;Q9C0A6-2;Q9C0A6-3;Q9C0A6;E7EWN3 H0Y3R4 764 789 SETD5 SET domain-containing protein 5 yes no 3 0.0034578 38.688 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 2527800 0 504220 0 629590 587890 806130 6507 395 6602 28892;28893;28894;28895 19093;19094;19095 19094 3 SAGEAGPGGSQGRVVR ________________ GSQGRVVRMKRRGGRG R S A V R M 2 2 0 0 0 1 1 5 0 0 0 0 0 0 1 2 0 0 0 2 0 16 1 1483.7492 Q5C9Z4 Q5C9Z4 6 21 NOM1 Nucleolar MIF4G domain-containing protein 1 yes yes 3 0.002815 62.287 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 5647800 996750 564030 593930 595620 1133400 1764000 6508 1178 6603 28896;28897;28898;28899;28900;28901 19096;19097;19098;19099 19096 4 SAGEEEDGPVLTDEQK PSLDQWHRSAGEEEDG PVLTDEQKSRIQAMKP R S A Q K S 1 0 0 2 0 1 4 2 0 0 1 1 0 0 1 1 1 0 0 1 0 16 0 1702.7534 Q66PJ3;F5GYV5;H7BZV4;B3V0L1;F8WCT1;F5H7X4;Q66PJ3-4;Q66PJ3-3;Q66PJ3-2 Q66PJ3 271 286 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 yes no 2 0.0021925 60.489 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 5686800 756730 2290200 1563200 1076700 0 0 6509 1214 6604 28902;28903;28904;28905 19100;19101 19100 2 SAGEEEDGPVLTDEQKSR PSLDQWHRSAGEEEDG LTDEQKSRIQAMKPMT R S A S R I 1 1 0 2 0 1 4 2 0 0 1 1 0 0 1 2 1 0 0 1 0 18 1 1945.8865 Q66PJ3;F5GYV5;H7BZV4;B3V0L1;F8WCT1;F5H7X4;Q66PJ3-4;Q66PJ3-3;Q66PJ3-2 Q66PJ3 271 288 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 yes no 3 0.0016994 57.197 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 4103600 537740 487240 534840 0 1214600 1329300 6510 1214 6605 28906;28907;28908;28909;28910 19102 19102 1 SAGGIGVAVSCIR KQCALISKSAGGIGVA GVAVSCIRATGSYIAG K S A I R A 2 1 0 0 1 0 0 3 0 2 0 0 0 0 0 2 0 0 0 2 0 13 0 1245.65 P23921;H0YFI0;E9PD78;E9PL69;E9PP77;H0YCY7 P23921 244 256 RRM1 Ribonucleoside-diphosphate reductase large subunit;Ribonucleoside-diphosphate reductase yes no 2 0.0020505 78.814 By matching By matching By matching By matching By matching By MS/MS 1 1 12021000 0 1293500 0 0 0 10728000 6511 870 6606 28911;28912 19103 19103 0 SAGQGEVLVYVEDPAGHQEEAK AEFTVETRSAGQGEVL AGHQEEAKVTANNDKN R S A A K V 3 0 0 1 0 2 4 3 1 0 1 1 0 0 1 1 0 0 1 3 0 22 0 2312.0921 Q5HY54;P21333-2;P21333;A6NDY9;F8WE98 Q5HY54 310 331 FLNA Filamin-A yes no 3 0.027134 32.695 By matching By MS/MS By matching By matching By matching By matching 1 1 13343000 0 11089000 0 2254000 0 0 6512 860 6607 28913;28914 19104 19104 1 SAGVPSRVIHIR KKFKGDSRSAGVPSRV PSRVIHIRKLPIDVTE R S A I R K 1 2 0 0 0 0 0 1 1 2 0 0 0 0 1 2 0 0 0 2 0 12 1 1290.7521 P26599;P26599-2;P26599-3 P26599 53 64 PTBP1 Polypyrimidine tract-binding protein 1 yes no 3 0.00747 61.815 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 89637000 0 14622000 14728000 8101300 16181000 36004000 6513 882 6608 28915;28916;28917;28918;28919 19105;19106;19107 19105 3 SAGVQCFGPTAEAAQLESSK AGIVGNLRSAGVQCFG AAQLESSKRFAKEFMD R S A S K R 4 0 0 0 1 2 2 2 0 0 1 1 0 1 1 3 1 0 0 1 0 20 0 2036.9473 C9JBJ1;C9JTV6;F8WD69;P22102-2;P22102;C9JZG2;C9JKQ7 C9JBJ1 88 107 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 2;3 1.1786E-26 101.48 By matching By MS/MS By MS/MS By matching By matching By matching 2 1 1 22931000 0 12397000 6727500 0 3806100 0 6514 239 6609 28920;28921;28922;28923 19108;19109;19110 19109 2 SAHATAPVNIAGSR SANLVGPRSAHATAPV PVNIAGSRTAAALAPA R S A S R T 4 1 1 0 0 0 0 1 1 1 0 0 0 0 1 2 1 0 0 1 0 14 0 1350.7004 Q9UQ35;F5GWZ7 Q9UQ35 2343 2356 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2;3 0.0018473 64.798 By MS/MS By matching By matching By matching By MS/MS By MS/MS 4 1 2 2 2 2 33659000 5686000 3580000 3583200 1814200 7389500 11606000 6515 1623 6610 28924;28925;28926;28927;28928;28929;28930;28931;28932;28933;28934;28935;28936 19111;19112;19113;19114;19115;19116;19117 19114 6 SAHATAPVNIAGSRTAAALAPASLTSAR SANLVGPRSAHATAPV PASLTSARMAPALSGA R S A A R M 10 2 1 0 0 0 0 1 1 1 2 0 0 0 2 4 3 0 0 1 0 28 1 2632.4045 Q9UQ35;F5GWZ7 Q9UQ35 2343 2370 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 3;4 9.5684E-64 106.88 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 267270000 98396000 68140000 38052000 36810000 13507000 12365000 6516 1623 6611 28937;28938;28939;28940;28941;28942 19118;19119;19120;19121;19122 19118 4 SAHLTNPWNEHKPVK RRELPFTKSAHLTNPW WNEHKPVKIGRDGQEI K S A V K I 1 0 2 0 0 0 1 0 2 0 1 2 0 0 2 1 1 1 0 1 0 15 1 1756.9009 Q96MU7-2;Q96MU7 Q96MU7-2 440 454 YTHDC1 YTH domain-containing protein 1 yes no 4 0.00057984 69.258 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 4336700 0 1127600 1036300 0 0 2172800 6517 1407 6612 28943;28944;28945 19123;19124 19124 1 SAHSLQPSISQK RDHCKVSKSAHSLQPS LQPSISQKSVFQMFQR K S A Q K S 1 0 0 0 0 2 0 0 1 1 1 1 0 0 1 4 0 0 0 0 0 12 0 1281.6677 Q8IYW5 Q8IYW5 549 560 RNF168 E3 ubiquitin-protein ligase RNF168 yes yes 2;3 0.0014941 83.137 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 1 2 1 2 19296000 1600600 2944600 8051700 1196700 0 5502600 6518 1292 6613 28946;28947;28948;28949;28950;28951;28952;28953 19125;19126;19127;19128;19129 19129 5 SAHTLVGPTPSR GEGPQGAKSAHTLVGP LVGPTPSRTETLVEET K S A S R T 1 1 0 0 0 0 0 1 1 0 1 0 0 0 2 2 2 0 0 1 0 12 0 1221.6466 Q13428-7;E7ETY2;Q13428-3;Q13428-8 Q13428-3 1168 1179 TCOF1 Treacle protein no no 3 0.0015241 83.226 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 6238400 1130300 853310 0 429760 2273000 1552000 6519 1082;383 6614 28954;28955;28956;28957;28958 19130;19131;19132;19133 19132 4 SAIDLTPIVVEDKEEK DVEKVEEKSAIDLTPI VVEDKEEKKEEEEKKE K S A E K K 1 0 0 2 0 0 3 0 0 2 1 2 0 0 1 1 1 0 0 2 0 16 1 1784.9408 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1622 1637 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2;3 0 241.39 By matching By MS/MS By matching By MS/MS By matching By MS/MS 2 2 2 875820000 0 415960000 0 58346000 0 401520000 6520 486 6615 28959;28960;28961;28962;28963;28964 19134;19135;19136;19137;19138;19139;19140;19141 19139 8 SAIDLTPIVVEDKEEKK DVEKVEEKSAIDLTPI VEDKEEKKEEEEKKEV K S A K K E 1 0 0 2 0 0 3 0 0 2 1 3 0 0 1 1 1 0 0 2 0 17 2 1913.0357 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1622 1638 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3;4 1.0245E-07 91.355 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 43579000 0 22273000 14827000 0 0 6478400 6521 486 6616 28965;28966;28967;28968 19142;19143;19144;19145 19143 4 SAILQENSTLSASNK GGFNGVSRSAILQENS STLSASNKCCINGAST R S A N K C 2 0 2 0 0 1 1 0 0 1 2 1 0 0 0 4 1 0 0 0 0 15 0 1561.7948 Q6JHV3;H0YMI4;Q9Y6I4;B3KMX7;H0YLB7;H0YKU8;F5H1A6;B4DWJ6 Q6JHV3 264 278 USP3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 2 1.8386E-05 77.726 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 1 30759000 1812700 4134600 2476200 0 8099700 14235000 6522 628 6617 28969;28970;28971;28972;28973;28974 19146;19147;19148;19149;19150 19150 4 SAILSAQSAANVRK EETKQKLKSAILSAQS QSAANVRKESLCQPAL K S A R K E 4 1 1 0 0 1 0 0 0 1 1 1 0 0 0 3 0 0 0 1 0 14 1 1414.7892 G5E9F3;Q9Y6J0;F5H085;B5MEB3 G5E9F3 2095 2108 CABIN1 Calcineurin-binding protein cabin-1 yes no 3 0.0083913 46.797 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 4733400 299200 999530 1507800 0 0 1927000 6523 595 6618 28975;28976;28977;28978 19151 19151 1 SAIMVKKMR RYEVAVRKSAIMVKKM AIMVKKMREFGIADPD K S A M R E 1 1 0 0 0 0 0 0 0 1 0 2 2 0 0 1 0 0 0 1 0 9 2 1062.6042 I3L4S5;I3L0T4;F5GYQ8;Q15067-2;Q15067 I3L4S5 31 39 ACOX1 Peroxisomal acyl-coenzyme A oxidase 1 yes no 2 0.034282 47.96 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 6524 497 6619 28979 19152 19152 58;59 1 SAKPQDAVVPESSSCAPSANGWCPGDR DGHLKCPRSAKPQDAV NGWCPGDRMGLSQAPP R S A D R M 4 1 1 2 2 1 1 2 0 0 0 1 0 0 4 5 0 1 0 2 0 27 1 2829.2446 Q9P275;Q9P275-2;E9PEW0 Q9P275 978 1004 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 3 0.00087645 46.656 By matching By matching By matching By matching By matching By MS/MS 1 1 4379300 0 2584600 0 0 0 1794700 6525 1576 6620 28980;28981 19153 19153 1 SALAFLNRGQPSSSNAGNK IQLSEEQKSALAFLNR SSSNAGNKRLSTIDES K S A N K R 3 1 3 0 0 1 0 2 0 0 2 1 0 1 1 4 0 0 0 0 0 19 1 1917.9657 Q9H0H5;F8VRD2;F8W1E5;F8W1T4;F8VV37;F8VQF5;F8VYH6;F8VQZ5;F8VZ66;F8VV47;F8VWY4;F8VVE5 Q9H0H5 123 141 RACGAP1 Rac GTPase-activating protein 1 yes no 3 2.2143E-51 116.61 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 69415000 6989100 11830000 33694000 0 0 16901000 6526 1479 6621 28982;28983;28984;28985;28986 19154;19155;19156;19157;19158;19159;19160 19156 7 SALAPNLLTSGK NPPVTGPRSALAPNLL PNLLTSGKKKKEMQVT R S A G K K 2 0 1 0 0 0 0 1 0 0 3 1 0 0 1 2 1 0 0 0 0 12 0 1170.6608 O15446;O15446-2 O15446 163 174 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes no 2 0.0018781 84.892 By matching By matching By matching By matching By MS/MS By matching 1 6862100 0 0 0 0 6862100 0 6527 706 6622 28987 19161 19161 1 SALCNADSPKDPVLPMK ALCVINSKSALCNADS KDPVLPMKFFTQPEKD K S A M K F 2 0 1 2 1 0 0 0 0 0 2 2 1 0 3 2 0 0 0 1 0 17 1 1841.9016 Q29RF7 Q29RF7 1090 1106 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2;3 1.5017E-07 90.259 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 1 1 93218000 34410000 6881800 25874000 9278200 4282300 12492000 6528 1159 6623 28988;28989;28990;28991;28992;28993;28994;28995 19162;19163;19164;19165;19166;19167;19168 19164 6 SALEEFSK RVASAAAKSALEEFSK SALEEFSKMKEEVPTA K S A S K M 1 0 0 0 0 0 2 0 0 0 1 1 0 1 0 2 0 0 0 0 0 8 0 909.44436 Q8TAQ2-2;F8VTJ5;Q8TAQ2;F8VXC8 Q8TAQ2-2 726 733 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 2 1.4398E-25 136.27 By MS/MS By matching By MS/MS By matching By matching By MS/MS 2 1 1 1 1 1 52599000 8013500 6257500 9970900 5274800 6314900 16768000 6529 539 6624 28996;28997;28998;28999;29000;29001;29002 19169;19170;19171;19172 19170 4 SALEQPETGK KEPPFVRKSALEQPET LEQPETGKAGADGGTP K S A G K A 1 0 0 0 0 1 2 1 0 0 1 1 0 0 1 1 1 0 0 0 0 10 0 1058.5244 Q9UPT8 Q9UPT8 1194 1203 ZC3H4 Zinc finger CCCH domain-containing protein 4 yes yes 2 0.02 63.624 By matching By matching By MS/MS By matching By matching By matching 1 419630 0 0 419630 0 0 0 6530 1620 6625 29003 19173 19173 1 SALFSESQK ALFPELPKSALFSESQ ALFSESQKAVELGDEL K S A Q K A 1 0 0 0 0 1 1 0 0 0 1 1 0 1 0 3 0 0 0 0 0 9 0 995.49238 Q96JM3 Q96JM3 566 574 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.033202 63.076 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 12595000 1167400 2120000 3275700 1313900 1733900 2983700 6531 1399 6626 29004;29005;29006;29007;29008;29009 19174;19175 19175 2 SALGDDINFEK LKPDIVTKSALGDDIN GDDINFEKIFKKPDST K S A E K I 1 0 1 2 0 0 1 1 0 1 1 1 0 1 0 1 0 0 0 0 0 11 0 1207.5721 Q8NEF9 Q8NEF9 76 86 SRFBP1 Serum response factor-binding protein 1 yes yes 2 0.025646 70.942 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 19400000 14248000 0 0 2230000 0 2922100 6532 1322 6627 29010;29011;29012 19176;19177;19178 19178 1 SALGPGVPHIINTK AHRVVKRKSALGPGVP VPHIINTKLLKHFTCL K S A T K L 1 0 1 0 0 0 0 2 1 2 1 1 0 0 2 1 1 0 0 1 0 14 0 1402.7932 Q9GZS1-2;Q9GZS1;E7EX70 Q9GZS1-2 296 309 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes no 3 5.4171E-20 108.23 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 39828000 10758000 1850000 7405300 0 4993900 14821000 6533 1475 6628 29013;29014;29015;29016;29017 19179;19180;19181 19181 3 SALLSHQDIHNKVK CGKAFSYRSALLSHQD QDIHNKVKRYHCKECG R S A V K R 1 0 1 1 0 1 0 0 2 1 2 2 0 0 0 2 0 0 0 1 0 14 1 1588.8685 Q15776 Q15776 363 376 ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 yes yes 3 0.0012784 70.438 By matching By matching By matching By matching By MS/MS By matching 1 1 861530 0 0 0 334860 526670 0 6534 1147 6629 29018;29019 19182 19182 1 SALQSYLK NVFFARSRSALQSYLK SALQSYLKRHESRGNQ R S A L K R 1 0 0 0 0 1 0 0 0 0 2 1 0 0 0 2 0 0 1 0 0 8 0 908.49673 Q9UNY4 Q9UNY4 864 871 TTF2 Transcription termination factor 2 yes yes 2 0.028515 72.23 By matching By matching By matching By matching By matching By MS/MS 1 1090900 0 0 0 0 0 1090900 6535 1618 6630 29020 19183 19183 1 SALSTVSFYNQNK ANQGSPFKSALSTVSF VSFYNQNKWYLNPLER K S A N K W 1 0 2 0 0 1 0 0 0 0 1 1 0 1 0 3 1 0 1 1 0 13 0 1457.7151 Q56NI9;E5RFE4;E5RFP7;E5RIE3 Q56NI9 79 91 ESCO2 N-acetyltransferase ESCO2 yes no 2 7.2483E-24 113.95 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 50900000 14713000 7242200 0 2043500 0 26901000 6536 1176 6631 29021;29022;29023;29024 19184;19185;19186;19187 19185 3 SAMPEGYVQER MKRHDFFKSAMPEGYV PEGYVQERTIFFKDDG K S A E R T 1 1 0 0 0 1 2 1 0 0 0 0 1 0 1 1 0 0 1 1 0 11 0 1265.571 CON__Q9U6Y5 CON__Q9U6Y5 86 96 yes yes 2 0.011996 62.528 By matching By matching By matching By matching By matching By MS/MS 1 1 1 29335000 0 13757000 6687900 0 0 8890000 + 6537 310 6632 29025;29026;29027 19188 19188 1 SANVSSIWHR WDDKTCQKSANVSSIW NVSSIWHRNYSPRPES K S A H R N 1 1 1 0 0 0 0 0 1 1 0 0 0 0 0 3 0 1 0 1 0 10 0 1155.5785 Q9UQ84-4;Q9UQ84 Q9UQ84-4 364 373 EXO1 Exonuclease 1 yes no 2 0.021394 62.466 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5827300 0 975480 1380300 0 0 3471600 6538 1624 6633 29028;29029;29030 19189 19189 1 SAPAGSSHPAASAR ________________ SHPAASARIPPKFGGA M S A A R I 5 1 0 0 0 0 0 1 1 0 0 0 0 0 2 4 0 0 0 0 0 14 0 1265.6113 O95487-2;O95487;B7ZKM8 O95487-2 2 15 SEC24B Protein transport protein Sec24B yes no 2 0.00060275 71.031 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1793600 0 0 0 263410 467040 1063100 6539 207 6634 29031;29032;29033 19190 19190 1 SAPAMQSSGSFNYARPK PMSALASRSAPAMQSS SFNYARPKQFIAAQNL R S A P K Q 3 1 1 0 0 1 0 1 0 0 0 1 1 1 2 4 0 0 1 0 0 17 1 1797.8468 Q8WX93-3;Q8WX93;Q8WX93-4 Q8WX93-3 337 353 PALLD Palladin yes no 2;3 0.0016716 60.158 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 28303000 0 9439700 4015500 1449800 4588000 8810000 6540 1343 6635 29034;29035;29036;29037;29038;29039 19191;19192;19193;19194;19195;19196 19193 6 SAPASQASLRATSSTQSLAR NSSFYSTRSAPASQAS SSTQSLARLGSPDYGN R S A A R L 5 2 0 0 0 2 0 0 0 0 2 0 0 0 1 6 2 0 0 0 0 20 1 1989.0239 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9 Q14980-2 1826 1845 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.00046586 58.848 By matching By MS/MS By matching By matching By matching By matching 1 1 33025000 18400000 14626000 0 0 0 0 6541 1121 6636 29040;29041 19197 19197 1 SAQIADLQQK LETEMEFRSAQIADLQ QIADLQQKLLDAESED R S A Q K L 2 0 0 1 0 3 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 10 0 1100.5826 O95239;O95239-2;F5H4Q9;Q2VIQ3 O95239 831 840 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 2 0.0047104 87.568 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 6137900 0 1881100 0 368910 0 3887900 6542 768 6637 29042;29043;29044 19198;19199 19199 2 SAQNLASRNLK SIQNYTDKSAQNLASR NLASRNLKHERFQSLS K S A L K H 2 1 2 0 0 1 0 0 0 0 2 1 0 0 0 2 0 0 0 0 0 11 1 1200.6575 P54132;F5H7R6;H0YNU5 P54132 630 640 BLM Bloom syndrome protein yes no 2;3 0.0050112 79.283 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 2 1 1 3407100 333940 532110 2081300 331570 128160 0 6543 965 6638 29045;29046;29047;29048;29049;29050 19200;19201 19201 2 SAQQEASADVATPKMPGQSVR RIQNVNVKSAQQEASA KMPGQSVRKKTRKAKE K S A V R K 4 1 0 1 0 3 1 1 0 0 0 1 1 0 2 3 1 0 0 2 0 21 1 2157.0484 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 1753 1773 AHCTF1 Protein ELYS yes no 3 0.026492 34.649 By MS/MS By matching By matching By matching By matching By matching 1 1 2746200 2125700 0 620480 0 0 0 6544 1345 6639 29051;29052 19202 19202 1 SAQQEASADVATPKMPGQSVRK RIQNVNVKSAQQEASA MPGQSVRKKTRKAKEI K S A R K K 4 1 0 1 0 3 1 1 0 0 0 2 1 0 2 3 1 0 0 2 0 22 2 2285.1434 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 1753 1774 AHCTF1 Protein ELYS yes no 4 8.4415E-06 61.276 By MS/MS By MS/MS By matching By matching By MS/MS By matching 2 1 1 1 1 1 23056000 7144200 2959400 3888000 2172100 3383600 3508600 6545 1345 6640 29053;29054;29055;29056;29057;29058;29059 19203;19204;19205;19206 19206 4 SAQYKKPPITVDSVCLK KLVEEHLKSAQYKKPP TVDSVCLKWAPPKHKQ K S A L K W 1 0 0 1 1 1 0 0 0 1 1 3 0 0 2 2 1 0 1 2 0 17 2 1933.0343 Q9H7Z6 Q9H7Z6 428 444 KAT8 Histone acetyltransferase KAT8 yes yes 3;4 0.027333 44.299 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 1 1 1 2 12521000 2092300 2511600 3927500 506150 401980 3081500 6546 1501 6641 29060;29061;29062;29063;29064;29065;29066;29067 19207;19208;19209 19207 3 SARLQCPQCVFGTNCPK KELQDEGRSARLQCPQ VFGTNCPKTFVQHAKT R S A P K T 1 1 1 0 3 2 0 1 0 0 1 1 0 1 2 1 1 0 0 1 0 17 1 2021.9234 Q9H582-2;Q9H582;F5GWV4 Q9H582-2 493 509 ZNF644 Zinc finger protein 644 yes no 3 0.028531 67.299 By matching By matching By MS/MS By matching By matching By matching 1 0 0 0 0 0 0 0 6547 1492 6642 29068 19210 19210 1 SARQNESSQPKVAEESGGQK TENKRCLRSARQNESS AEESGGQKSAKVLMQN R S A Q K S 2 1 1 0 0 3 3 2 0 0 0 2 0 0 1 4 0 0 0 1 0 20 2 2116.0145 P46013;F5H4V4;P46013-2 P46013 3158 3177 MKI67 Antigen KI-67 no no 4 0.012799 39.364 By matching By matching By MS/MS By matching By matching By matching 1 695710 0 0 695710 0 0 0 6548 919;920 6643 29069 19211 19211 1 SASAPAAEGEGTPTQPASEKEPEMPGPR ________________ EPEMPGPREESEEEED M S A P R E 5 1 0 0 0 1 5 3 0 0 0 1 1 0 6 3 2 0 0 0 0 28 1 2778.2767 P35659;P35659-2;B4DFG0;D6R9L5 P35659 2 29 DEK Protein DEK yes no 3 1.2509E-10 60.472 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 98645000 42385000 18039000 28322000 0 9899200 0 6549 901 6644 29070;29071;29072;29073 19212;19213;19214 19212 3 SASELTAGAEAEAEEVKTGK LEICGAQRSASELTAG AEEVKTGKCATVSAAV R S A G K C 5 0 0 0 0 0 5 2 0 0 1 2 0 0 0 2 2 0 0 1 0 20 1 1976.9538 Q9H0U9;B4DN10 Q9H0U9 140 159 TSPYL1 Testis-specific Y-encoded-like protein 1 yes no 3 1.0975E-17 97.271 By MS/MS By matching By matching By matching By matching By matching 1 3083700 3083700 0 0 0 0 0 6550 1482 6645 29074 19215 19215 1 SASLKNVDAAVSPRGAAAQAGER NSRLAVDKSASLKNVD AAAQAGERESGVVAVS K S A E R E 7 2 1 1 0 1 1 2 0 0 1 1 0 0 1 3 0 0 0 2 0 23 2 2225.1513 Q96T58 Q96T58 2090 2112 SPEN Msx2-interacting protein yes yes 4 0.0070029 40.158 By MS/MS By matching By matching By matching By matching By matching 1 1 1198200 681940 0 516250 0 0 0 6551 1422 6646 29075;29076 19216 19216 1 SASNTAAEFGEPLPK GRDYFCNRSASNTAAE EFGEPLPKRLKSSVVA R S A P K R 3 0 1 0 0 0 2 1 0 0 1 1 0 1 2 2 1 0 0 0 0 15 0 1517.7362 O75362;E7ET68 O75362 904 918 ZNF217 Zinc finger protein 217 yes no 2 0.0025153 63.462 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 9275400 2352100 1313300 3052100 385230 0 2172700 6552 740 6647 29077;29078;29079;29080;29081 19217;19218 19218 2 SASVAPFTCK NLGTIETKSASVAPFT SVAPFTCKTSEAKKEE K S A C K T 2 0 0 0 1 0 0 0 0 0 0 1 0 1 1 2 1 0 0 1 0 10 0 1066.5117 P49790;F6QR24;Q4LE47 P49790 1057 1066 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 2 1.9889E-61 145.99 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 36426000 7613200 3245600 5266000 4179300 8323500 7798500 6553 531 6648 29082;29083;29084;29085;29086;29087;29088 19219;19220;19221;19222;19223;19224 19220 6 SATESTPGERGEEKPLDGQEHR GYRGDREKSATESTPG PLDGQEHRERPEGETG K S A H R E 1 2 0 1 0 1 5 3 1 0 1 1 0 0 2 2 2 0 0 0 0 22 2 2409.1157 Q12873;E9PG89 Q12873 1641 1662 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 3;4 3.3377E-15 89.859 By matching By matching By MS/MS By matching By matching By MS/MS 2 2 2 1 1 2 58017000 2884100 16216000 15792000 1750000 2937400 18437000 6554 430 6649 29089;29090;29091;29092;29093;29094;29095;29096;29097;29098 19225;19226;19227;19228 19226 4 SATEYKNEEYQR RIVSTKGKSATEYKNE YKNEEYQRSERNKRLD K S A Q R S 1 1 1 0 0 1 3 0 0 0 0 1 0 0 0 1 1 0 2 0 0 12 1 1516.6794 Q96MU7-2;Q96MU7 Q96MU7-2 91 102 YTHDC1 YTH domain-containing protein 1 yes no 3 0.0021903 75.788 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 6927000 752120 737700 2002400 925990 888200 1620600 6555 1407 6650 29099;29100;29101;29102;29103;29104 19229;19230;19231;19232 19230 4 SATNLPQLK IRDDKDWKSATNLPQL ATNLPQLKELYQLSKE K S A L K E 1 0 1 0 0 1 0 0 0 0 2 1 0 0 1 1 1 0 0 0 0 9 0 970.54475 P49916-2;P49916 P49916-2 818 826 LIG3 DNA ligase 3 yes no 2 0.0060764 93.598 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2183100 0 0 0 344300 646590 1192200 6556 947 6651 29105;29106;29107 19233;19234 19233 2 SATNTTLPHMLMSQR LQGHSVIRSATNTTLP PHMLMSQRVIAPNPAQ R S A Q R V 1 1 1 0 0 1 0 0 1 0 2 0 2 0 1 2 3 0 0 0 0 15 0 1686.8182 Q8WXI9 Q8WXI9 250 264 GATAD2B Transcriptional repressor p66-beta yes yes 2;3 1.5039E-70 134.4 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 35503000 0 640500 0 0 0 34862000 6557 1344 6652 29108;29109 19235;19236 19235 2 SATVKPGAVGAGEFVSPCESGDNTGEPSALEEQRGPLPLNK SPAKRGRKSATVKPGA RGPLPLNKTLFLGYAF K S A N K T 4 1 2 1 1 1 5 6 0 0 3 2 0 1 5 4 2 0 0 3 0 41 2 4152.007 Q12888;Q12888-2;A6NNK5 Q12888 1686 1726 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 4 1.2148E-93 94.674 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 74543000 0 10812000 19116000 12104000 3694000 28818000 6558 1063 6653 29110;29111;29112;29113;29114 19237;19238;19239;19240 19238 4 SAVCIADPLPTPSQEK CQCVEPIKSAVCIADP LPTPSQEKSQTELPDE K S A E K S 2 0 0 1 1 1 1 0 0 1 1 1 0 0 3 2 1 0 0 1 0 16 0 1711.8451 Q99575 Q99575 355 370 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 2 3.4203E-218 167.69 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 45155000 0 20911000 0 0 0 24244000 6559 1428 6654 29115;29116 19241;19242 19242 2 SAVGFDYQGK VQADRVDKSAVGFDYQ VGFDYQGKTEKHESQR K S A G K T 1 0 0 1 0 1 0 2 0 0 0 1 0 1 0 1 0 0 1 1 0 10 0 1070.5033 Q14247;Q14247-3;Q14247-2;H7C314 Q14247 172 181 CTTN Src substrate cortactin yes no 2 0.010216 73.9 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 9965700 1561400 2489800 0 308680 0 5605800 6560 1104 6655 29117;29118;29119;29120 19243 19243 1 SAVGFDYQGKTEK VQADRVDKSAVGFDYQ DYQGKTEKHESQRDYS K S A E K H 1 0 0 1 0 1 1 2 0 0 0 2 0 1 0 1 1 0 1 1 0 13 1 1428.6885 Q14247;Q14247-3;Q14247-2;H7C314 Q14247 172 184 CTTN Src substrate cortactin yes no 3 0.0019706 84.365 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 3014700 0 1124400 1890300 0 0 0 6561 1104 6656 29121;29122 19244;19245 19245 2 SAVGFEYQGK VQMDRVDQSAVGFEYQ VGFEYQGKTEKHASQK Q S A G K T 1 0 0 0 0 1 1 2 0 0 0 1 0 1 0 1 0 0 1 1 0 10 0 1084.5189 Q14247;Q14247-3;Q14247-2;H7C314 Q14247 135 144 CTTN Src substrate cortactin yes no 2 6.1332E-05 107.55 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 1 1 1 15946000 2876300 1838000 2294700 1645300 2788800 4502700 6562 1104 6657 29123;29124;29125;29126;29127;29128;29129 19246;19247;19248;19249 19248 4 SAVGFEYQGKTEK VQMDRVDQSAVGFEYQ EYQGKTEKHASQKDYS Q S A E K H 1 0 0 0 0 1 2 2 0 0 0 2 0 1 0 1 1 0 1 1 0 13 1 1442.7042 Q14247;Q14247-3;Q14247-2;H7C314 Q14247 135 147 CTTN Src substrate cortactin yes no 2;3 0.0022762 83.692 By MS/MS By MS/MS By matching By matching By MS/MS By matching 2 2 2 1 1 1 9327400 2856200 1578200 2182700 1435100 0 1275200 6563 1104 6658 29130;29131;29132;29133;29134;29135;29136;29137;29138 19250;19251;19252;19253 19252 4 SAVQKPPSTGSAPAIESVD EAEPKSQRSAVQKPPS APAIESVD________ R S A V D - 3 0 0 1 0 1 1 1 0 1 0 1 0 0 3 4 1 0 0 2 0 19 1 1839.9214 Q9NUQ3;Q9NUQ3-2 Q9NUQ3 510 528 TXLNG Gamma-taxilin yes no 2 0.019626 43.326 By MS/MS By matching By matching By matching By matching By matching 1 5277200 5277200 0 0 0 0 0 6564 1546 6659 29139 19254 19254 1 SAVRPASLNLNR VHYATMARSAVRPASL PASLNLNRSRSLSNSN R S A N R S 2 2 2 0 0 0 0 0 0 0 2 0 0 0 1 2 0 0 0 1 0 12 1 1296.7262 Q96N67-4;Q96N67-3;Q96N67-5;Q96N67-2;Q96N67-6;Q96N67;H0Y7L2 Q96N67-4 882 893 DOCK7 Dedicator of cytokinesis protein 7 yes no 3 5.3573E-18 113.61 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 1 1 1 1 12289000 2213900 1270200 1014200 0 3639900 4150600 6565 1409 6660 29140;29141;29142;29143;29144;29145 19255;19256;19257;19258 19255 4 SAVRVGIADGHR AGMNAAVRSAVRVGIA VGIADGHRMLAIYDGF R S A H R M 2 2 0 1 0 0 0 2 1 1 0 0 0 0 0 1 0 0 0 2 0 12 1 1236.6687 Q01813;H0Y3P8;Q5VSR7;B1APP6 Q01813 431 442 PFKP 6-phosphofructokinase type C yes no 3 0.0028155 73.273 By matching By matching By matching By matching By matching By MS/MS 1 1 953640 0 0 0 0 410640 543010 6566 1031 6661 29146;29147 19259 19259 1 SAVTTVVNPK TGENPIYKSAVTTVVN VTTVVNPKYEGK____ K S A P K Y 1 0 1 0 0 0 0 0 0 0 0 1 0 0 1 1 2 0 0 3 0 10 0 1014.571 P05556 P05556 785 794 ITGB1 Integrin beta-1 yes yes 2 0.024054 60.255 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 5632900 0 1666700 939800 249980 784670 1991800 6567 798 6662 29148;29149;29150;29151;29152 19260 19260 1 SAVTTVVNPKYEGK TGENPIYKSAVTTVVN VNPKYEGK________ K S A G K - 1 0 1 0 0 0 1 1 0 0 0 2 0 0 1 1 2 0 1 3 0 14 1 1491.7933 P05556 P05556 785 798 ITGB1 Integrin beta-1 yes yes 2;3 0.0014627 83.53 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 2 10960000 1105100 2208600 3468100 1115900 0 3062100 6568 798 6663 29153;29154;29155;29156;29157;29158;29159;29160;29161;29162 19261;19262;19263;19264;19265;19266;19267 19264 7 SAVTYLNSTMHPGTRK VFEPERKKSAVTYLNS TMHPGTRKRANEEHWP K S A R K R 1 1 1 0 0 0 0 1 1 0 1 1 1 0 1 2 3 0 1 1 0 16 1 1761.8832 Q96BD5-2;Q96BD5;Q96BD5-3 Q96BD5-2 413 428 PHF21A PHD finger protein 21A yes no 3 0.023257 35.711 By matching By matching By matching By matching By matching By MS/MS 1 1 2539900 934090 0 0 0 0 1605800 6569 1371 6664 29163;29164 19268 19268 1 SAWYRGQSPAGDGSPEPPTPR LPTKNNVRSAWYRGQS SPEPPTPRYNTWVLQD R S A P R Y 2 2 0 1 0 1 1 3 0 0 0 0 0 0 5 3 1 1 1 0 0 21 1 2212.0297 Q9H6R4-4;Q9H6R4;Q9H6R4-2;G8JLK7;Q9H6R4-3 Q9H6R4-4 276 296 NOL6 Nucleolar protein 6 yes no 3 1.0861E-14 89.756 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 27439000 0 3136700 2932500 1537600 6024300 13808000 6570 1497 6665 29165;29166;29167;29168;29169 19269;19270;19271 19270 3 SAYNVYVAER LGKPKRPRSAYNVYVA YNVYVAERFQEAKGDS R S A E R F 2 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 2 2 0 10 0 1170.5669 Q00059;H7BYN3 Q00059 160 169 TFAM Transcription factor A, mitochondrial yes no 2 0.0030919 92.112 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 12525000 2367800 824190 0 1633500 3379300 4320300 6571 1019 6666 29170;29171;29172;29173;29174 19272;19273;19274 19272 3 SAYNVYVAERFQEAK LGKPKRPRSAYNVYVA AERFQEAKGDSPQEKL R S A A K G 3 1 1 0 0 1 2 0 0 0 0 1 0 1 0 1 0 0 2 2 0 15 1 1773.8686 Q00059;H7BYN3 Q00059 160 174 TFAM Transcription factor A, mitochondrial yes no 3 0.00024128 86.738 By matching By matching By matching By matching By matching By MS/MS 1 8339000 0 0 0 0 0 8339000 6572 1019 6667 29175 19275 19275 1 SCAAAGTECLISGWGNTK VATVSLPRSCAAAGTE ISGWGNTKSSGSSYPS R S C T K S 3 0 1 0 2 0 1 3 0 1 1 1 0 0 0 2 2 1 0 0 0 18 0 1881.8349 CON__P00761 CON__P00761 116 133 yes yes 2;3 0 300.29 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 2 1 528480000 12416000 188660000 0 315750000 0 11650000 + 6573 284 6668 29176;29177;29178;29179;29180 19276;19277;19278;19279;19280;19281;19282 19276 7 SCCSCCPVGCAK CKCTSCKKSCCSCCPV CCPVGCAKCAHGCVCK K S C A K C 1 0 0 0 5 0 0 1 0 0 0 1 0 0 1 2 0 0 0 1 0 12 0 1444.5026 Q8N339;P80297;P13640-2;P04732;P02795;CON__P67983;P13640 Q8N339 32 43 MT1M;MT1X;MT1G;MT1E;MT2A Metallothionein-1M;Metallothionein-1X;Metallothionein-1G;Metallothionein-1E;Metallothionein-2 yes no 2 0.0017931 78.548 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 7434000 429640 1237900 3509600 254010 384240 1618600 + 6574 303 6669 29181;29182;29183;29184;29185;29186 19283;19284 19284 2 SCEGQNPELLPKTPISPLK TTSITDAKSCEGQNPE KTPISPLKTGVSKPIV K S C L K T 0 0 1 0 1 1 2 1 0 1 3 2 0 0 4 2 1 0 0 0 0 19 1 2107.0983 Q9NQW6;Q9NQW6-2 Q9NQW6 308 326 ANLN Actin-binding protein anillin yes no 3 2.8042E-06 87.088 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 16458000 0 0 5429000 6327600 4701200 0 6575 1533 6670 29187;29188;29189 19285;19286 19285 2 SCFLCMVCK CEGNSFHKSCFLCMVC CFLCMVCKKNLDSTTV K S C C K K 0 0 0 0 3 0 0 0 0 0 1 1 1 1 0 1 0 0 0 1 0 9 0 1203.4909 P21291;B3KVC9;E9PS42 P21291 33 41 CSRP1 Cysteine and glycine-rich protein 1 yes no 2 0.011026 83.783 By matching By matching By matching By MS/MS By matching By matching 1 13728000 0 0 0 13728000 0 0 6576 859 6671 29190 19287 19287 1 SCGLHVTSIK SSVGTILKSCGLHVTS GLHVTSIKIDPYINID K S C I K I 0 0 0 0 1 0 0 1 1 1 1 1 0 0 0 2 1 0 0 1 0 10 0 1100.5648 P17812;B7Z9C4 P17812 29 38 CTPS1 CTP synthase 1 yes no 2 0.0060443 86.014 By matching By matching By matching By matching By matching By MS/MS 1 1 1 6253800 0 0 787980 0 1705300 3760500 6577 852 6672 29191;29192;29193 19288 19288 1 SCGPASQSTLGLK SQRRSQGRSCGPASQS SQSTLGLKGSLKRSAI R S C L K G 1 0 0 0 1 1 0 2 0 0 2 1 0 0 1 3 1 0 0 0 0 13 0 1304.6395 Q9BXS6-2;Q9BXS6-3;Q9BXS6;E7ERR5;Q9BXS6-5;E9PB35;H0YMD2;Q9BXS6-4 Q9BXS6-2 254 266 NUSAP1 Nucleolar and spindle-associated protein 1 no no 2 0.0070898 58.595 By matching By matching By matching By matching By matching By MS/MS 1 1 3505600 0 733960 0 0 0 2771600 6578 1463;1464 6673 29194;29195 19289 19289 1 SCGPASQSTLGLKGSLK SQRRSQGRSCGPASQS LGLKGSLKRSAISAAK R S C L K R 1 0 0 0 1 1 0 3 0 0 3 2 0 0 1 4 1 0 0 0 0 17 1 1689.872 Q9BXS6-2;Q9BXS6-3;Q9BXS6;E7ERR5;Q9BXS6-5;E9PB35;H0YMD2;Q9BXS6-4 Q9BXS6-2 254 270 NUSAP1 Nucleolar and spindle-associated protein 1 no no 3 0.0021855 54.859 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 8645600 1770000 0 0 918310 1421900 4535400 6579 1463;1464 6674 29196;29197;29198;29199 19290;19291 19290 2 SCHAQFYQCHSLLK TLSPFVCKSCHAQFYQ YQCHSLLKSFLQRVNA K S C L K S 1 0 0 0 2 2 0 0 2 0 2 1 0 1 0 2 0 0 1 0 0 14 0 1777.8028 Q8N554-2;Q8N554;H3BPT7;H3BTT0;H3BTK0 Q8N554-2 63 76 ZNF276 Zinc finger protein 276 yes no 3 0.00092216 73.758 By matching By matching By matching By matching By matching By MS/MS 1 1 1 10553000 0 0 1754600 4954900 0 3843400 6580 1300 6675 29200;29201;29202 19292 19292 1 SCISCLNSNAMPR ARGHNGVRSCISCLNS LNSNAMPRLRVGIGRP R S C P R L 1 1 2 0 2 0 0 0 0 1 1 0 1 0 1 3 0 0 0 0 0 13 0 1508.6534 Q86Y79 Q86Y79 146 158 PTRH1 Probable peptidyl-tRNA hydrolase yes yes 2 0.008202 57.434 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 21510000 1235400 2269300 1524600 883260 4513400 11084000 6581 1273 6676 29203;29204;29205;29206;29207;29208 19293;19294;19295 19294 3 SCLVKEVEK FSVPLRRKSCLVKEVE CLVKEVEKMKNKREEK K S C E K M 0 0 0 0 1 0 2 0 0 0 1 2 0 0 0 1 0 0 0 2 0 9 1 1090.5692 B7Z6Q6;Q99661;Q99661-2;Q5JR91;B7Z7M6;Q5JR89 B7Z6Q6 151 159 KIF2C Kinesin-like protein KIF2C yes no 2 8.9927E-29 132.32 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 24690000 0 8899800 9937200 0 5853200 0 6582 193 6677 29209;29210;29211 19296;19297 19296 2 SCLVKEVEKMK FSVPLRRKSCLVKEVE VKEVEKMKNKREEKKA K S C M K N 0 0 0 0 1 0 2 0 0 0 1 3 1 0 0 1 0 0 0 2 0 11 2 1349.7047 B7Z6Q6;Q99661;Q99661-2;Q5JR91;B7Z7M6;Q5JR89 B7Z6Q6 151 161 KIF2C Kinesin-like protein KIF2C yes no 3 3.7386E-41 131.83 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 21528000 0 1867900 7816100 3747200 2814100 5282300 6583 193 6678 29212;29213;29214;29215;29216 19298;19299;19300;19301 19299 4 SCNEQIEESEK NQSANCLKSCNEQIEE EQIEESEKHTANYDTE K S C E K H 0 0 1 0 1 1 4 0 0 1 0 1 0 0 0 2 0 0 0 0 0 11 0 1351.5562 Q99590-2;F8VXG7;Q99590;F8W028 Q99590-2 134 144 SCAF11 Protein SCAF11 yes no 2 0.016471 58.172 By matching By matching By MS/MS By matching By matching By matching 1 696360 0 0 696360 0 0 0 6584 547 6679 29217 19302 19302 1 SCNEQIEESEKHTANYDTEER NQSANCLKSCNEQIEE ANYDTEERVGSSSSES K S C E R V 1 1 2 1 1 1 6 0 1 1 0 1 0 0 0 2 2 0 1 0 0 21 1 2568.0671 Q99590-2;F8VXG7;Q99590;F8W028 Q99590-2 134 154 SCAF11 Protein SCAF11 yes no 4 1.4352E-05 63.225 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 3479000 0 0 2127800 1351200 0 0 6585 547 6680 29218;29219 19303;19304 19304 2 SCPCGYIFISRK QQVPVACKSCPCGYIF GYIFISRKLLNAKHSE K S C R K L 0 1 0 0 2 0 0 1 0 2 0 1 0 1 1 2 0 0 1 0 0 12 1 1486.7061 Q6PH81;H3BQL3;Q6PH81-2 Q6PH81 29 40 C16orf87 UPF0547 protein C16orf87 yes no 3 0.0053108 58.754 By matching By matching By MS/MS By matching By matching By matching 1 1 3202000 0 0 2232800 0 969210 0 6586 638 6681 29220;29221 19305 19305 1 SCQAQPTTMAR LSNTVPAKSCQAQPTT AQPTTMARHPHPHLSF K S C A R H 2 1 0 0 1 2 0 0 0 0 0 0 1 0 1 1 2 0 0 0 0 11 0 1249.5543 CON__P02668 CON__P02668 87 97 yes yes 2 0.0008967 93.839 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 18477000 2875800 0 4834500 2835000 2606100 5326000 + 6587 291 6682 29222;29223;29224;29225;29226 19306;19307;19308;19309 19309 4 SCQISCKSR ________________ CQISCKSRGRGGGGGG M S C S R G 0 1 0 0 2 1 0 0 0 1 0 1 0 0 0 3 0 0 0 0 0 9 1 1124.5067 P35908;CON__P35908 P35908 2 10 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 0.014113 83.499 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 10425000 1138900 5537600 0 2930900 0 817970 + 6588 302 6683 29227;29228;29229;29230 19310;19311 19310 2 SCQVENGRVIACFDSLKGR CKFAHPSKSCQVENGR CFDSLKGRCSRENCKY K S C G R C 1 2 1 1 2 1 1 2 0 1 1 1 0 1 0 2 0 0 0 2 0 19 2 2195.0576 Q9NR56-3;Q9NR56-4;E9PBW7;Q9NR56-6;C9JP00;Q9NR56-2;Q9NR56-5;Q9NR56;H7C4T5;O95205;Q5VZF2-3;Q5VZF2-2;Q5VZF2;B4E3F7 Q9NR56-3 42 60 MBNL1;MBLL;MBNL2 Muscleblind-like protein 1;Muscleblind-like protein 2 no no 3;4 2.3622E-10 90.385 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 2 1 1 77857000 0 18325000 22629000 16725000 5394800 14784000 6589 263;764 6684 29231;29232;29233;29234;29235;29236;29237 19312;19313;19314;19315 19315 4 SCREGICGSCAMNINGGNTLACTR DSTLTFRRSCREGICG GNTLACTRRIDTNLNK R S C T R R 2 2 3 0 4 0 1 4 0 2 1 0 1 0 0 2 2 0 0 0 0 24 1 2658.1189 P21912 P21912 92 115 SDHB Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 3 0.0034029 48.232 By MS/MS By matching By matching By matching By matching By matching 1 4830400 4830400 0 0 0 0 0 6590 861 6685 29238 19316 19316 1 SCRQFSSSYLSR ________________ FSSSYLSRSGGGGGGG M S C S R S 0 2 0 0 1 1 0 0 0 0 1 0 0 1 0 5 0 0 1 0 0 12 1 1476.678 P35527;CON__P35527 P35527 2 13 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.005152 65.809 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 141980000 0 0 29926000 43963000 67599000 491180 + 6591 899 6686 29239;29240;29241;29242 19317;19318;19319;19320 19320 4 SCSAQAEPPEPNEYDIPPASHVYSLKPK YDMGGSAKSCSAQAEP HVYSLKPKRVGAGFPK K S C P K R 3 0 1 1 1 1 3 0 1 1 1 2 0 0 6 4 0 0 2 1 0 28 1 3110.4655 O94762;B7Z8Y7 O94762 626 653 RECQL5 ATP-dependent DNA helicase Q5 yes no 4 0.0066297 34.04 By matching By matching By matching By MS/MS By matching By matching 1 1 14362000 0 8240500 0 6121800 0 0 6592 197 6687 29243;29244 19321 19321 1 SCSDRAMESTESR GDGALFDKSCSDRAME AMESTESRHYPVFENP K S C S R H 1 2 0 1 1 0 2 0 0 0 0 0 1 0 0 4 1 0 0 0 0 13 1 1514.609 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 975 987 ADAR Double-stranded RNA-specific adenosine deaminase no no 3 0.0022298 71.558 By matching By MS/MS By matching By matching By matching By matching 1 1 1 3169900 0 1509700 0 287550 0 1372700 6593 352;968 6688 29245;29246;29247 19322 19322 1 SCSDRAMESTESRHYPVFENPK GDGALFDKSCSDRAME YPVFENPKQGKLRTKV K S C P K Q 1 2 1 1 1 0 3 0 1 0 0 1 1 1 2 4 1 0 1 1 0 22 2 2626.154 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 975 996 ADAR Double-stranded RNA-specific adenosine deaminase no no 4 0.004586 59.154 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 36270000 5796900 9666200 7713200 4215900 8878000 0 6594 352;968 6689 29248;29249;29250;29251;29252 19323;19324;19325;19326 19324 3 SCSVPTGPATTFCSFDK ________________ TTFCSFDKSCRCGVCL R S C D K S 1 0 0 1 2 0 0 1 0 0 0 1 0 2 2 3 3 0 0 1 0 17 0 1860.8022 Q9BYR8;CON__Q9BYR8 Q9BYR8 8 24 KRTAP3-1 Keratin-associated protein 3-1 yes no 2 7.0226E-14 100.04 By matching By matching By matching By MS/MS By matching By matching 1 45961000 0 0 0 45961000 0 0 + 6595 309 6690 29253 19327 19327 1 SCTAPTAQPHDRPLTASSSLAPGQR GQGAHSYKSCTAPTAQ SSLAPGQRVQNLHAYQ K S C Q R V 4 2 0 1 1 2 0 1 1 0 2 0 0 0 4 4 3 0 0 0 0 25 1 2605.2667 Q7Z5J4-3;E7EVZ3;Q7Z5J4;A8MTC3;Q7Z5J4-2;C9JWB0;A8MXE8;Q7Z5J4-4;E7ETW1 Q7Z5J4-3 238 262 RAI1 Retinoic acid-induced protein 1 yes no 4 0.024814 32.548 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 7379800 0 1326100 1491900 1025600 1649500 1886600 6596 39 6691 29254;29255;29256;29257;29258 19328 19328 1 SCTPYELR RYPDPNFKSCTPYELR SCTPYELRTIDVFDGN K S C L R T 0 1 0 0 1 0 1 0 0 0 1 0 0 0 1 1 1 0 1 0 0 8 0 1024.4648 Q92466-2;Q92466-4;Q92466 Q92466-2 174 181 DDB2 DNA damage-binding protein 2 yes no 2 0.02554 75.043 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 7637400 423350 1184900 1300300 0 780760 3948100 6597 1347 6692 29259;29260;29261;29262;29263 19329 19329 1 SCTQSATAPQQEADAEVNTETLNK AHWPEHMKSCTQSATA VNTETLNKSSQGSSSS K S C N K S 4 0 2 1 1 3 3 0 0 0 1 1 0 0 1 2 4 0 0 1 0 24 0 2592.161 Q9ULU4-14;Q2HXV3;Q9ULU4-12;Q9ULU4-13;B7ZM62;H7C4X9;Q9ULU4-8;Q2HXV1;Q9ULU4-9;F8WAN7;Q9ULU4-5;Q9ULU4-10;Q9ULU4-7;E7ETU8;F5H0X3;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;H7C0U2;Q9ULU4;Q9ULU4-11;Q9ULU4-2 Q9ULU4-14 1010 1033 ZMYND8 Protein kinase C-binding protein 1 yes no 3 0.0079798 37.373 By MS/MS By matching By matching By matching By matching By matching 1 2804600 2804600 0 0 0 0 0 6598 1160 6693 29264 19330 19330 1 SCVSVEWAEGGATK VRTVNLEKSCVSVEWA WAEGGATKGKEIDFDD K S C T K G 2 0 0 0 1 0 2 2 0 0 0 1 0 0 0 2 1 1 0 2 0 14 0 1479.6664 B7Z6Q6;Q99661;Q5JR91;Q5JR89 B7Z6Q6 39 52 KIF2C Kinesin-like protein KIF2C yes no 2 3.9463E-14 98.676 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 2 13535000 0 4302700 5482800 0 322540 3426800 6599 193 6694 29265;29266;29267;29268;29269 19331;19332;19333 19332 3 SCVSVEWAEGGATKGK VRTVNLEKSCVSVEWA EGGATKGKEIDFDDVA K S C G K E 2 0 0 0 1 0 2 3 0 0 0 2 0 0 0 2 1 1 0 2 0 16 1 1664.7828 B7Z6Q6;Q99661;Q5JR91;Q5JR89 B7Z6Q6 39 54 KIF2C Kinesin-like protein KIF2C yes no 2;3 3.4159E-27 111.81 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 14311000 2735500 7406700 4169300 0 0 0 6600 193 6695 29270;29271;29272;29273 19334;19335;19336 19335 3 SDAEDGEGTVASWELR SNTFNPAKSDAEDGEG TVASWELRVEGRLLED K S D L R V 2 1 0 2 0 0 3 2 0 0 1 0 0 0 0 2 1 1 0 1 0 16 0 1720.754 Q96GM5-2;Q96GM5 Q96GM5-2 195 210 SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes no 2 0.002299 57.595 By matching By matching By matching By MS/MS By matching By matching 1 1 3785800 0 2325300 0 1460500 0 0 6601 1388 6696 29274;29275 19337 19337 1 SDAGLESDTAMK ________________ LESDTAMKKGETLRKQ R S D M K K 2 0 0 2 0 0 1 1 0 0 1 1 1 0 0 2 1 0 0 0 0 12 0 1223.534 Q9NR30;Q3SWU7 Q9NR30 7 18 DDX21 Nucleolar RNA helicase 2 yes no 2 0.021164 51.463 By matching By matching By matching By matching By MS/MS By matching 1 1 2530400 0 0 515490 0 2015000 0 6602 1534 6697 29276;29277 19338 19338 1 SDASPSSIRSLK QDIQVMLKSDASPSSI PSSIRSLKSDMMSHLV K S D L K S 1 1 0 1 0 0 0 0 0 1 1 1 0 0 1 5 0 0 0 0 0 12 1 1246.6517 P33992;E7EQY5;B1AHA9;F8WBR1 P33992 130 141 MCM5 DNA replication licensing factor MCM5 yes no 2;3 0.0018213 77.674 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 1 1 2 8894300 0 4189300 1779200 452840 320930 2152000 6603 892 6698 29278;29279;29280;29281;29282;29283;29284;29285 19339;19340;19341 19341 3 SDATSGILNSTNIQS RELSKASKSDATSGIL LNSTNIQS________ K S D Q S - 1 0 2 1 0 1 0 1 0 2 1 0 0 0 0 4 2 0 0 0 0 15 0 1506.7162 H9KV59;O43663;O43663-2 H9KV59 592 606 PRC1 Protein regulator of cytokinesis 1 yes no 2 3.3111E-70 132.31 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 80455000 22438000 0 58016000 0 0 0 6604 676 6699 29286;29287 19342;19343;19344;19345 19343 4 SDAYYCTGDVTAWTK CSGQLVFKSDAYYCTG GDVTAWTKCMVKTQTP K S D T K C 2 0 0 2 1 0 0 1 0 0 0 1 0 0 0 1 3 1 2 1 0 15 0 1736.7352 P09874 P09874 306 320 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 2 1.8485E-229 176.25 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 149500000 0 42933000 39032000 12718000 12588000 42234000 6605 815 6700 29288;29289;29290;29291;29292 19346;19347;19348;19349;19350 19348 4 SDCGVDCCCDPTK QCGCRKQKSDCGVDCC DCCCDPTKCRNRQQGK K S D T K C 0 0 0 3 4 0 0 1 0 0 0 1 0 0 1 1 1 0 0 1 0 13 0 1572.5313 O95239;F5H4Q9 O95239 1104 1116 KIF4A Chromosome-associated kinesin KIF4A yes no 2 0.0016243 74.537 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1795000 0 0 457950 0 299170 1037900 6606 768 6701 29293;29294;29295 19351 19351 1 SDCGVDCCCDPTKCR QCGCRKQKSDCGVDCC CCDPTKCRNRQQGKDS K S D C R N 0 1 0 3 5 0 0 1 0 0 0 1 0 0 1 1 1 0 0 1 0 15 1 1888.6631 O95239;F5H4Q9 O95239 1104 1118 KIF4A Chromosome-associated kinesin KIF4A yes no 3 0.0025498 60.937 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 16225000 0 2518700 2718100 1425700 2283600 7279300 6607 768 6702 29296;29297;29298;29299;29300 19352 19352 1 SDDILEEGEK VDSKEKEKSDDILEEG DILEEGEKNLGNIKVT K S D E K N 0 0 0 2 0 0 3 1 0 1 1 1 0 0 0 1 0 0 0 0 0 10 0 1133.5088 Q7Z2T5;Q7Z2T5-2 Q7Z2T5 337 346 TRMT1L TRMT1-like protein yes no 2 0.0025538 101.3 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 18586000 0 4757700 1860200 1052300 3067100 7848800 6608 1248 6703 29301;29302;29303;29304;29305 19353;19354;19355 19354 3 SDDYLPSIEQQPQQK GPNAQLVKSDDYLPSI IEQQPQQKKKKKKNNH K S D Q K K 0 0 0 2 0 4 1 0 0 1 1 1 0 0 2 2 0 0 1 0 0 15 0 1774.8374 Q9P2D1;Q9P2D1-2 Q9P2D1 583 597 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes no 2 0.022098 41.621 By matching By matching By matching By matching By matching By MS/MS 1 1 2068500 0 768730 0 0 0 1299800 6609 1578 6704 29306;29307 19356 19356 1 SDEEEQQYVIK IHQVHKEKSDEEEQQY EEQQYVIKCGTCTKAF K S D I K C 0 0 0 1 0 2 3 0 0 1 0 1 0 0 0 1 0 0 1 1 0 11 0 1366.6252 Q9Y4E5-2;E9PH99;Q9Y4E5 Q9Y4E5-2 780 790 ZNF451 Zinc finger protein 451 yes no 2 8.06E-56 142.19 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 1 23064000 2738600 3761100 3382500 1429300 3916900 7836200 6610 436 6705 29308;29309;29310;29311;29312;29313;29314;29315;29316 19357;19358;19359;19360;19361;19362 19358 6 SDESIKEEDKDQDEK QEESERAKSDESIKEE EDKDQDEKRRRVTSRE K S D E K R 0 0 0 4 0 1 4 0 0 1 0 3 0 0 0 2 0 0 0 0 0 15 2 1793.7803 F5GX68 F5GX68 189 203 DNMT1 Cytosine-specific methyltransferase no no 3 0.0009638 85.909 By matching By matching By MS/MS By matching By matching By matching 1 1 1 3440800 0 579020 2658800 203020 0 0 6611 487 6706 29317;29318;29319 19363;19364 19364 2 SDFQVNLNNASR LEKEGWKKSDFQVNLN VNLNNASRSQSSHSYD K S D S R S 1 1 3 1 0 1 0 0 0 0 1 0 0 1 0 2 0 0 0 1 0 12 0 1363.648 O60716-32;O60716-31;O60716-29;O60716-27;O60716-30;O60716-28;O60716-26;O60716-25;O60716-24;O60716-23;O60716-21;O60716-19;O60716-22;O60716-20;O60716-16;O60716-18;O60716-15;O60716-17;O60716-13;O60716-11;O60716-14;O60716-12;O60716-10;O60716-8;O60716-9;E9PIE5;O60716-7;O60716-5;C9JZR2;O60716-3;O60716-6;F8WA43;O60716-4;O60716-2;O60716;H0YC95 O60716-32 518 529 CTNND1 Catenin delta-1 yes no 2 0.0018947 85.45 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 8081100 1257600 0 2238200 0 0 4585300 6612 275 6707 29320;29321;29322 19365;19366 19365 2 SDGACDSPSSDKENSSQIAQDHQK DEEATEKKSDGACDSP QIAQDHQKKETVVKED K S D Q K K 2 0 1 4 1 3 1 1 1 1 0 2 0 0 1 6 0 0 0 0 0 24 1 2590.0838 Q9UIG0-2;Q9UIG0 Q9UIG0-2 152 175 BAZ1B Tyrosine-protein kinase BAZ1B yes no 4 0.01084 36.744 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 3204900 0 0 631960 624790 1030100 918050 6613 1596 6708 29323;29324;29325;29326 19367;19368;19369 19369 3 SDGEAKPEPSPSPR PRTPRRSKSDGEAKPE PEPSPSPRITRKSTRQ K S D P R I 1 1 0 1 0 0 2 1 0 0 0 1 0 0 4 3 0 0 0 0 0 14 1 1452.6845 F5GX68 F5GX68 143 156 DNMT1 Cytosine-specific methyltransferase no no 3 1.5651E-07 95.183 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 14605000 1407600 2410100 3847500 618230 1936100 4385300 6614 487 6709 29327;29328;29329;29330;29331;29332 19370;19371 19371 1 SDHPGISITDLSK NASREKIKSDHPGISI ISITDLSKKAGEIWKG K S D S K K 0 0 0 2 0 0 0 1 1 2 1 1 0 0 1 3 1 0 0 0 0 13 0 1368.6885 Q08945 Q08945 567 579 SSRP1 FACT complex subunit SSRP1 yes yes 3 0.0016366 82.705 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2216900 0 1081300 0 0 0 1135700 6615 1048 6710 29333;29334 19372;19373 19373 2 SDMEWTSSSK LARDSEKKSDMEWTSS MEWTSSSKINALMHAL K S D S K I 0 0 0 1 0 0 1 0 0 0 0 1 1 0 0 4 1 1 0 0 0 10 0 1156.4707 Q14527;Q14527-2;H7C5K0 Q14527 825 834 HLTF Helicase-like transcription factor yes no 2 0.0076039 84.198 By matching By matching By matching By matching By matching By MS/MS 1 2374400 0 0 0 0 0 2374400 6616 1107 6711 29335 19374 19374 1 SDMHYSVAEGLKPAAPSAR ETIPEEARSDMHYSVA KPAAPSARNAPYFPCD R S D A R N 4 1 0 1 0 0 1 1 1 0 1 1 1 0 2 3 0 0 1 1 0 19 1 1985.9629 P41182-2;P41182 P41182-2 271 289 BCL6 B-cell lymphoma 6 protein yes no 3 0.018622 38.057 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2507500 0 732140 672800 0 0 1102600 6617 911 6712 29336;29337;29338 19375 19375 1 SDNFVICSVTGAGPREER TCTGAEGRSDNFVICS GAGPREERMVTGAGVV R S D E R M 1 2 1 1 1 0 2 2 0 1 0 0 0 1 1 2 1 0 0 2 0 18 1 1992.9323 Q8NFC6 Q8NFC6 1736 1753 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 3 0.00010238 84.046 By matching By MS/MS By matching By matching By matching By matching 1 1 25074000 0 22380000 0 2694600 0 0 6618 1325 6713 29339;29340 19376 19376 1 SDPQKAVDQPRQLFWEK NHPSNKVKSDPQKAVD PRQLFWEKKLSGLNAF K S D E K K 1 1 0 2 0 3 1 0 0 0 1 2 0 1 2 1 0 1 0 1 0 17 2 2071.0487 O95983;O95983-2 O95983 125 141 MBD3 Methyl-CpG-binding domain protein 3 yes no 3 0.010471 66.568 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 45364000 0 0 33405000 0 0 11960000 6619 776 6714 29341;29342 19377;19378 19377 2 SDPVDPDKEPEKEDVSASGPSPEATQLAK DGLSSQLKSDPVDPDK PEATQLAKQMELEQAV K S D A K Q 3 0 0 4 0 1 4 1 0 0 1 3 0 0 5 4 1 0 0 2 0 29 2 3022.4255 Q96T58 Q96T58 2139 2167 SPEN Msx2-interacting protein yes yes 4 0.013269 29.341 By matching By matching By MS/MS By matching By matching By matching 1 1 1651900 0 885390 766510 0 0 0 6620 1422 6715 29343;29344 19379 19379 1 SDQALNCGGTASTGSAGNVK KDKYKKKKSDQALNCG TGSAGNVKLEESADNI K S D V K L 3 0 2 1 1 1 0 4 0 0 1 1 0 0 0 3 2 0 0 1 0 20 0 1893.8487 O00287 O00287 179 198 RFXAP Regulatory factor X-associated protein yes yes 2 0.016015 52.72 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 6621 689 6716 29345 19380 19380 1 SDQDHSMDEMTAVVK ________________ DEMTAVVKIEKGVGGN M S D V K I 1 0 0 3 0 1 1 0 1 0 0 1 2 0 0 2 1 0 0 2 0 15 0 1691.7131 P08047;H3BUU5 P08047 2 16 SP1 Transcription factor Sp1 yes no 2 0 201.4 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 121860000 40497000 0 44984000 0 5953200 30429000 6622 804 6717 29346;29347;29348;29349 19381;19382;19383;19384 19382 4 SDQEAKPSTEDLGDK ________________ STEDLGDKKEGEYIKL M S D D K K 1 0 0 3 0 1 2 1 0 0 1 2 0 0 1 2 1 0 0 0 0 15 1 1618.7322 B8ZZJ0;B9A032;P63165;B8ZZN6 B8ZZJ0 2 16 SUMO1 Small ubiquitin-related modifier 1 yes no 2 2.9712E-08 96.489 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 23117000 4328300 5551400 2966600 1665000 3581400 5024700 6623 213 6718 29350;29351;29352;29353;29354;29355;29356 19385;19386;19387;19388;19389;19390;19391;19392 19390 8 SDQEAKPSTEDLGDKK ________________ TEDLGDKKEGEYIKLK M S D K K E 1 0 0 3 0 1 2 1 0 0 1 3 0 0 1 2 1 0 0 0 0 16 2 1746.8272 B8ZZJ0;B9A032;P63165;B8ZZN6 B8ZZJ0 2 17 SUMO1 Small ubiquitin-related modifier 1 yes no 3 6.9459E-80 134.88 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 19042000 1919000 4076300 4012000 2413500 3138000 3483100 6624 213 6719 29357;29358;29359;29360;29361;29362;29363 19393;19394;19395;19396;19397;19398 19394 6 SDQSRLDSELK RRRVDQLKSDQSRLDS SRLDSELKNMQDMVED K S D L K N 0 1 0 2 0 1 1 0 0 0 2 1 0 0 0 3 0 0 0 0 0 11 1 1276.6259 P04264;CON__P04264 P04264 247 257 KRT1 Keratin, type II cytoskeletal 1 no no 2;3 0.031885 62.166 By matching By matching By MS/MS By matching By MS/MS By matching 1 2 1 2 1 22118000 0 5903600 4550700 1163100 7544700 2955500 + 6625 789 6720 29364;29365;29366;29367;29368;29369;29370 19399;19400 19399 2 SDSGKPYYYNSQTK KCPWKEYKSDSGKPYY YYYNSQTKESRWAKPK K S D T K E 0 0 1 1 0 1 0 1 0 0 0 2 0 0 1 3 1 0 3 0 0 14 1 1636.7369 E9PHJ7;O75400-2;O75400-3;F8W9L2;O75400;F5H578;H7C2N3;H0YG38 E9PHJ7 61 74 PRPF40A Pre-mRNA-processing factor 40 homolog A yes no 2;3 6.0247E-05 91.812 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 1 38360000 3116300 5257300 8226100 4143500 7649400 9967200 6626 438 6721 29371;29372;29373;29374;29375;29376;29377;29378;29379;29380 19401;19402;19403;19404;19405;19406;19407 19403 7 SDSGTAAQTSLDIDKNEK RQKEAKTKSDSGTAAQ LDIDKNEKCYLCKSLV K S D E K C 2 0 1 3 0 1 1 1 0 1 1 2 0 0 0 3 2 0 0 0 0 18 1 1878.8807 Q96RL1;F8VQY2;Q96RL1-3;F2Z2T8;Q96RL1-2;Q96RL1-4;H7BXP9 Q96RL1 545 562 UIMC1 BRCA1-A complex subunit RAP80 yes no 2;3 5.4696E-45 114.56 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 1 2 1 2 61495000 8307600 10313000 9247700 7476100 9841700 16309000 6627 535 6722 29381;29382;29383;29384;29385;29386;29387;29388;29389;29390;29391 19408;19409;19410;19411;19412;19413;19414;19415 19413 8 SDSNLGGHSIRCK VKPTSATKSDSNLGGH GGHSIRCKSKNLEDDT K S D C K S 0 1 1 1 1 0 0 2 1 1 1 1 0 0 0 3 0 0 0 0 0 13 1 1429.6732 Q14966-3;Q14966;Q14966-4;Q14966-2;C9JBI6;F5H330 Q14966-3 628 640 ZNF638 Zinc finger protein 638 yes no 3 0.0023228 65.295 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 3279700 370960 905610 1696500 306680 0 0 6628 1118 6723 29392;29393;29394;29395 19416;19417 19416 2 SDSPAIQLR VLGIKRDKSDSPAIQL DSPAIQLRLKEPMDVD K S D L R L 1 1 0 1 0 1 0 0 0 1 1 0 0 0 1 2 0 0 0 0 0 9 0 985.51926 Q96ST3 Q96ST3 938 946 SIN3A Paired amphipathic helix protein Sin3a yes yes 2 0.023291 68.016 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 7407600 0 0 902110 571770 1710700 4223100 6629 1420 6724 29396;29397;29398;29399 19418;19419 19419 2 SDSQTPSPNEIK VSFPETPKSDSQTPSP TPSPNEIKTEQSLAGP K S D I K T 0 0 1 1 0 1 1 0 0 1 0 1 0 0 2 3 1 0 0 0 0 12 0 1301.6099 Q9NYD6;D6RAG4 Q9NYD6 204 215 HOXC10 Homeobox protein Hox-C10 yes no 2 0.0015649 90.697 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 12715000 1189800 3080600 0 0 0 8444800 6630 1562 6725 29400;29401;29402 19420;19421;19422 19420 1 SDSQTPSPNEIKTEQSLAGPK VSFPETPKSDSQTPSP EQSLAGPKGSPSESEK K S D P K G 1 0 1 1 0 2 2 1 0 1 1 2 0 0 3 4 2 0 0 0 0 21 1 2213.0812 Q9NYD6;D6RAG4 Q9NYD6 204 224 HOXC10 Homeobox protein Hox-C10 yes no 3 0.009727 40.952 By matching By matching By MS/MS By matching By matching By matching 1 1 1 5989000 0 0 2367200 1431200 0 2190500 6631 1562 6726 29403;29404;29405 19423 19423 1 SDSSGLTSLK TEASQEERSDSSGLTS SSGLTSLKKSPKVSSK R S D L K K 0 0 0 1 0 0 0 1 0 0 2 1 0 0 0 4 1 0 0 0 0 10 0 993.49785 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;Q76FK4-3 F5H101 712 721 NOL8 Nucleolar protein 8 yes no 2 0.0028576 95.483 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 19113000 2578100 3644300 226510 1849900 5305100 5509000 6632 27 6727 29406;29407;29408;29409;29410;29411 19424;19425;19426;19427 19424 4 SDTLTDSQIDRDLHK QAPDISPKSDTLTDSQ QIDRDLHKLSLLAQAS K S D H K L 0 1 0 4 0 1 0 0 1 1 2 1 0 0 0 2 2 0 0 0 0 15 1 1742.8435 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 950 964 SETX Probable helicase senataxin yes no 3 0.0073455 50.108 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5647500 328420 1494800 983990 0 0 2840300 6633 1250 6728 29412;29413;29414;29415 19428 19428 1 SDTSESGAGLTRFQAEASEK ________________ FQAEASEKDSSSMMQT M S D E K D 3 1 0 1 0 1 3 2 0 0 1 1 0 1 0 4 2 0 0 0 0 20 1 2069.9502 Q9UNF1;Q9UNF1-2;H7BXW3;Q5H907 Q9UNF1 2 21 MAGED2 Melanoma-associated antigen D2 yes no 2 0.010534 42.123 By matching By matching By MS/MS By matching By matching By matching 1 3344600 0 0 3344600 0 0 0 6634 1614 6729 29416 19429 19429 1 SDTTDSSQGLQDKEQNLTR GAKPLSLKSDTTDSSQ DKEQNLTRRISTSDIL K S D T R R 0 1 1 3 0 3 1 1 0 0 2 1 0 0 0 3 3 0 0 0 0 19 1 2121.9774 O60293-2;O60293 O60293-2 331 349 ZFC3H1 Zinc finger C3H1 domain-containing protein yes no 3 0.016691 38.777 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2509800 0 875600 0 0 553990 1080200 6635 729 6730 29417;29418;29419 19430;19431 19430 2 SDVEAIFSK LNTLVVKKSDVEAIFS DVEAIFSKYGKIVGCS K S D S K Y 1 0 0 1 0 0 1 0 0 1 0 1 0 1 0 2 0 0 0 1 0 9 0 994.49713 G3V576;G3V4W0;B4DY08;G3V4C1;P07910-2;B2R603;G3V2Q1;P07910;G3V555;G3V575;P07910-4;O60812;G3V2H6;G3V4M8;Q569J8;G3V5X6;G3V3K6;G3V251;B4DSU6 G3V576 31 39 HNRNPC;HNRNPCL1;HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 1 yes no 1;2 2.9821E-19 120.27 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2 1 81039000 38338000 6531700 10016000 2229300 13077000 10846000 6636 68 6731 29420;29421;29422;29423;29424;29425;29426 19432;19433;19434;19435;19436;19437 19432 6 SDVYYFSPSGK KSGLSAGKSDVYYFSP YYFSPSGKKFRSKPQL K S D G K K 0 0 0 1 0 0 0 1 0 0 0 1 0 1 1 3 0 0 2 1 0 11 0 1248.5663 Q9UBB5;Q9UBB5-3 Q9UBB5 175 185 MBD2 Methyl-CpG-binding domain protein 2 yes no 2 0.00089665 93.839 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 96639000 0 21877000 68520000 3442700 1932000 867510 6637 1581 6732 29427;29428;29429;29430;29431 19438;19439;19440;19441 19440 4 SEAASPALPVITK AEKKVVIKSEAASPAL PALPVITKVETLSPES K S E T K V 3 0 0 0 0 0 1 0 0 1 1 1 0 0 2 2 1 0 0 1 0 13 0 1282.7133 Q99958 Q99958 215 227 FOXC2 Forkhead box protein C2 yes yes 2 0.0013002 89.747 By matching By MS/MS By matching By MS/MS By matching By MS/MS 2 1 1 23343000 0 3616700 0 1629600 0 18097000 6638 1434 6733 29432;29433;29434;29435 19442;19443;19444;19445 19443 3 SEAGGLKQEIMTLKEEQNK TDNQNNSKSEAGGLKQ TLKEEQNKMQKEVNDL K S E N K M 1 0 1 0 0 2 4 2 0 1 2 3 1 0 0 1 1 0 0 0 0 19 2 2132.0783 P49454 P49454 1123 1141 CENPF Centromere protein F yes yes 3 0.0039479 57.616 By matching By MS/MS By matching By matching By matching By matching 1 2212400 0 2212400 0 0 0 0 6639 936 6734 29436 19446 19446 1 SEAITSVDDAIRK LATFIMDKSEAITSVD SVDDAIRKLV______ K S E R K L 2 1 0 2 0 0 1 0 0 2 0 1 0 0 0 2 1 0 0 1 0 13 1 1403.7256 E9PN68;E9PLN2;E9PNT0;E9PLH1;Q9H6S3;B7ZKL3 E9PN68 65 77 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 yes no 3 0.00067415 76.24 By matching By matching By matching By matching By matching By MS/MS 1 1 2614300 0 0 900070 0 0 1714300 6640 205 6735 29437;29438 19447 19447 1 SEALRTKPDVCK ISSCLNTKSEALRTKP RTKPDVCKAGLLSKSS K S E C K A 1 1 0 1 1 0 1 0 0 0 1 2 0 0 1 1 1 0 0 1 0 12 2 1402.7238 Q9Y4C1;F5H4E6;F5H070;F8WE62 Q9Y4C1 354 365 KDM3A Lysine-specific demethylase 3A yes no 3 0.0062938 76.332 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 1 12561000 948780 2315300 4050800 1523400 878400 2844600 6641 516 6736 29439;29440;29441;29442;29443;29444 19448;19449;19450;19451 19448 4 SEATDGGFTSQIRK KSNKRSEKSEATDGGF GFTSQIRKASNTSKNI K S E R K A 1 1 0 1 0 1 1 2 0 1 0 1 0 1 0 2 2 0 0 0 0 14 1 1495.7267 Q96QE3;Q96QE3-2 Q96QE3 679 692 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2;3 4.1587E-55 130.19 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 25859000 2185800 5534900 6092100 2029000 3198600 6818600 6642 1415 6737 29445;29446;29447;29448;29449;29450;29451;29452;29453;29454;29455;29456 19452;19453;19454;19455;19456;19457;19458;19459;19460 19456 9 SEDGTPAEDGTPAATGGSQPPSMGR TKKRKKRKSEDGTPAE SQPPSMGRKKRNRTKA K S E G R K 3 1 0 2 0 1 2 5 0 0 0 0 1 0 4 3 3 0 0 0 0 25 0 2372.0186 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 1106 1130 MYBBP1A Myb-binding protein 1A yes no 3 0.0081297 35.66 By MS/MS By matching By matching By matching By matching By matching 1 2778700 2778700 0 0 0 0 0 6643 682 6738 29457 19461 19461 1 SEDGTPAEDGTPAATGGSQPPSMGRK TKKRKKRKSEDGTPAE QPPSMGRKKRNRTKAK K S E R K K 3 1 0 2 0 1 2 5 0 0 0 1 1 0 4 3 3 0 0 0 0 26 1 2500.1136 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 1106 1131 MYBBP1A Myb-binding protein 1A yes no 3 0.001433 40.177 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 5215700 0 1134500 875500 0 1673800 1531900 6644 682 6739 29458;29459;29460;29461 19462;19463;19464 19463 3 SEDGTPAEDGTPAATGGSQPPSMGRKK TKKRKKRKSEDGTPAE PPSMGRKKRNRTKAKV K S E K K R 3 1 0 2 0 1 2 5 0 0 0 2 1 0 4 3 3 0 0 0 0 27 2 2628.2086 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 1106 1132 MYBBP1A Myb-binding protein 1A yes no 4 1.241E-219 153.58 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 48618000 12590000 7556400 8268000 8166600 6926500 5110100 6645 682 6740 29462;29463;29464;29465;29466;29467 19465;19466;19467;19468;19469;19470;19471;19472;19473 19473 9 SEDSSGAAGLSGLHR EEKREAEKSEDSSGAA AGLSGLHRTYSQDCSF K S E H R T 2 1 0 1 0 0 1 3 1 0 2 0 0 0 0 4 0 0 0 0 0 15 0 1442.675 Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;Q86U86-8;Q86U86;E7EVG2;H0Y5B5 Q86U86-5 931 945 PBRM1 Protein polybromo-1 yes no 2 0.0026064 58.885 By matching By matching By matching By matching By matching By MS/MS 1 1 696540 0 0 109250 0 0 587290 6646 1260 6741 29468;29469 19474 19474 1 SEDVTPMEVTAEK LIPSSMIKSEDVTPME PMEVTAEKRSSTIFKT K S E E K R 1 0 0 1 0 0 3 0 0 0 0 1 1 0 1 1 2 0 0 2 0 13 0 1434.6548 O94916-2;O94916-3;O94916;O94916-4;E9PHR7 O94916-2 528 540 NFAT5 Nuclear factor of activated T-cells 5 yes no 2 0.013039 52.821 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 5893000 1325300 0 887310 1956200 1724300 0 6647 440 6742 29470;29471;29472;29473 19475;19476 19475 2 SEEANEPKAEKPDATADAEPDANQK PLSKPAQKSEEANEPK AEPDANQKAEAAPESQ K S E Q K A 6 0 2 3 0 1 5 0 0 0 0 3 0 0 3 1 1 0 0 0 0 25 2 2654.1944 Q96T58 Q96T58 1766 1790 SPEN Msx2-interacting protein yes yes 4 0.0022446 49.66 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4921200 0 980550 1957800 1053200 0 929650 6648 1422 6743 29474;29475;29476;29477 19477;19478 19478 2 SEEGNVSAPGPESK PRKPVEEKSEEGNVSA SAPGPESKQATTPASR K S E S K Q 1 0 1 0 0 0 3 2 0 0 0 1 0 0 2 3 0 0 0 1 0 14 0 1386.6263 Q03164-2;Q03164;E9PQG7;E9PR05;H7BYJ6 Q03164-2 1271 1284 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 2 4.2233E-05 92.773 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 10783000 2035600 0 1261300 1641400 3253600 2590800 6649 464 6744 29478;29479;29480;29481;29482 19479;19480;19481;19482;19483;19484;19485 19482 7 SEEGNVSAPGPESKQATTPASRK PRKPVEEKSEEGNVSA ATTPASRKSSKQVSQP K S E R K S 3 1 1 0 0 1 3 2 0 0 0 2 0 0 3 4 2 0 0 1 0 23 2 2327.1353 Q03164-2;Q03164;E9PQG7;E9PR05;H7BYJ6 Q03164-2 1271 1293 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 4 0.031586 31.503 By MS/MS By matching By matching By matching By matching By matching 1 1 1339900 1073900 0 0 266000 0 0 6650 464 6745 29483;29484 19486 19486 1 SEEKISDSEGFKANLSLLR PPGGPGGRSEEKISDS KANLSLLRRPGEKTYT R S E L R R 1 1 1 1 0 0 3 1 0 1 3 2 0 1 0 4 0 0 0 0 0 19 2 2122.0906 P23246;P23246-2 P23246 268 286 SFPQ Splicing factor, proline- and glutamine-rich yes no 4 0.0025551 55.189 By matching By MS/MS By matching By matching By matching By matching 1 3340400 0 3340400 0 0 0 0 6651 865 6746 29485 19487 19487 0 SEELAALSSQQPEK LFQQARAKSEELAALS LSSQQPEKVMAKQMEF K S E E K V 2 0 0 0 0 2 3 0 0 0 2 1 0 0 1 3 0 0 0 0 0 14 0 1515.7417 Q13506 Q13506 356 369 NAB1 NGFI-A-binding protein 1 yes yes 2 1.2287E-07 96.371 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 3983700 0 2518100 1465500 0 0 0 6652 1084 6747 29486;29487 19488;19489 19489 2 SEELGLNSSKQPGTK EGMTTQDKSEELGLNS SSKQPGTKADLTEAVV K S E T K A 0 0 1 0 0 1 2 2 0 0 2 2 0 0 1 3 1 0 0 0 0 15 1 1573.7948 E7EVA0 E7EVA0 1133 1147 MAP4 Microtubule-associated protein yes yes 3 0.0029804 58.079 By MS/MS By matching By matching By matching By MS/MS By matching 2 1 1 1 1 1 6421100 1804200 394670 555660 1104700 1565500 996310 6653 388 6748 29488;29489;29490;29491;29492;29493;29494 19490;19491 19490 2 SEFLSTAPR VQPKNNDKSEFLSTAP EFLSTAPRSLRKRLIV K S E P R S 1 1 0 0 0 0 1 0 0 0 1 0 0 1 1 2 1 0 0 0 0 9 0 1006.5084 Q13416 Q13416 156 164 ORC2 Origin recognition complex subunit 2 yes yes 2 0.0060764 99.815 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 49546000 8171200 6900000 7948700 3759800 7921200 14845000 6654 1081 6749 29495;29496;29497;29498;29499;29500;29501 19492;19493;19494;19495;19496;19497 19497 6 SEGDGTQDIVDK KADPENIKSEGDGTQD GTQDIVDKSSEKLVRG K S E D K S 0 0 0 3 0 1 1 2 0 1 0 1 0 0 0 1 1 0 0 1 0 12 0 1262.5626 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1513 1524 RIF1 Telomere-associated protein RIF1 yes no 2 0.0017862 77.644 By MS/MS By matching By MS/MS By matching By matching By matching 1 2 1 1 1 7165900 519870 3056900 710870 0 970070 1908200 6655 1201 6750 29502;29503;29504;29505;29506;29507 19498;19499 19499 2 SEGDGTQDIVDKSSEK KADPENIKSEGDGTQD IVDKSSEKLVRGRTRY K S E E K L 0 0 0 3 0 1 2 2 0 1 0 2 0 0 0 3 1 0 0 1 0 16 1 1693.7643 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1513 1528 RIF1 Telomere-associated protein RIF1 yes no 3 0.0074805 46.89 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 6296800 677410 0 1976700 690490 1084100 1868200 6656 1201 6751 29508;29509;29510;29511;29512 19500;19501;19502 19500 3 SEGELLER PRKESIIKSEGELLER SEGELLERERERQRTE K S E E R E 0 1 0 0 0 0 3 1 0 0 2 0 0 0 0 1 0 0 0 0 0 8 0 931.46108 A1X283 A1X283 532 539 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 2 0.0083162 99.136 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 3790200 849760 192020 0 521510 0 2226900 6657 2 6752 29513;29514;29515;29516 19503;19504 19503 2 SEGFKAGDKTLTPR RESVNLGKSEGFKAGD GDKTLTPRKLSTRNRT K S E P R K 1 1 0 1 0 0 1 2 0 0 1 2 0 1 1 1 2 0 0 0 0 14 2 1505.7838 P46013;F5H4V4 P46013 380 393 MKI67 Antigen KI-67 yes no 3 0.0044219 69.456 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 17726000 4144800 2733700 4643400 0 1587700 4616200 6658 919 6753 29517;29518;29519;29520;29521;29522 19505;19506;19507;19508;19509 19507 5 SEHPGLSIGDTAK SEHRPKIKSEHPGLSI LSIGDTAKKLGEMWS_ K S E A K K 1 0 0 1 0 0 1 2 1 1 1 1 0 0 1 2 1 0 0 0 0 13 0 1310.6466 D6R9A6;P26583 D6R9A6 115 127 HMGB2 High mobility group protein B2 yes no 3 0.0086219 55.196 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 5630400 1629800 0 507560 1249300 1228900 1014700 6659 315 6754 29523;29524;29525;29526;29527 19510;19511;19512 19510 3 SEIAHRFKDLGEEHFK VFRRDTHKSEIAHRFK DLGEEHFKGLVLIAFS K S E F K G 1 1 0 1 0 0 3 1 2 1 1 2 0 2 0 1 0 0 0 0 0 16 2 1941.9697 CON__P02769 CON__P02769 29 44 yes yes 3;4 0.0013274 76.156 By matching By matching By matching By MS/MS By matching By MS/MS 1 2 2 1 13369000 0 0 1015300 5816100 2324500 4213400 + 6660 294 6755 29528;29529;29530;29531;29532;29533 19513;19514 19514 1 SEICTEEPQKQK DVKRQVERSEICTEEP TEEPQKQKSTLKNEKH R S E Q K S 0 0 0 0 1 2 3 0 0 1 0 2 0 0 1 1 1 0 0 0 0 12 1 1475.6926 Q8NFC6 Q8NFC6 683 694 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2;3 0.0084877 71.085 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 2 1 2 2 7259100 691040 1061100 2632700 407160 813320 1653800 6661 1325 6756 29534;29535;29536;29537;29538;29539;29540;29541;29542;29543 19515;19516;19517;19518;19519 19519 5 SEIEYYAMLAK NNCPALRKSEIEYYAM EYYAMLAKTGVHHYSG K S E A K T 2 0 0 0 0 0 2 0 0 1 1 1 1 0 0 1 0 0 2 0 0 11 0 1316.6322 E5RI99;P62888 E5RI99 58 68 RPL30 60S ribosomal protein L30 yes no 2 3.7995E-86 152.69 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 5 1 1 2 6 2 4022800000 845770000 46279000 28878000 2274900000 766860000 60072000 6662 342 6757;6758 29544;29545;29546;29547;29548;29549;29550;29551;29552;29553;29554;29555;29556;29557;29558;29559;29560 19520;19521;19522;19523;19524;19525;19526;19527;19528;19529;19530;19531;19532;19533;19534 19522 31 15 SEIIDEKGPVMSK ________________ EKGPVMSKTHDHQLES R S E S K T 0 0 0 1 0 0 2 1 0 2 0 2 1 0 1 2 0 0 0 1 0 13 1 1431.7279 Q9H410;Q5JW53 Q9H410 7 19 DSN1 Kinetochore-associated protein DSN1 homolog yes no 3 0.0077701 58.04 By matching By matching By matching By matching By matching By MS/MS 1 1 1311500 0 0 0 0 429430 882110 6663 1488 6759 29561;29562 19535 19535 1 SEISENTDASGK ESRHEVEKSEISENTD ENTDASGKIEKYNVPL K S E G K I 1 0 1 1 0 0 2 1 0 1 0 1 0 0 0 3 1 0 0 0 0 12 0 1236.547 F8VQE1;Q9UHB6-2;B4DN52;Q9UHB6;Q9UHB6-4;F8VRN8 F8VQE1 15 26 LIMA1 LIM domain and actin-binding protein 1 yes no 2 0.0079543 61.11 By matching By matching By MS/MS By matching By matching By matching 1 418400 0 0 418400 0 0 0 6664 107 6760 29563 19536 19536 1 SEKGVIQVYDLGQDGQGMSR SRNILYTRSEKGVIQV QDGQGMSRVASVSQNA R S E S R V 0 1 0 2 0 3 1 4 0 1 1 1 1 0 0 2 0 0 1 2 0 20 1 2166.0375 E9PF10;O75694-2;B4DLT2;O75694 E9PF10 295 314 NUP155 Nuclear pore complex protein Nup155 yes no 3 0.00011416 80.109 By matching By MS/MS By matching By matching By matching By matching 1 8053600 0 8053600 0 0 0 0 6665 100 6761 29564 19537 19537 1 SEKIPKESTTVTCTGEK PRRSSEEKSEKIPKES TVTCTGEKASKPGTHE K S E E K A 0 0 0 0 1 0 3 1 0 1 0 3 0 0 1 2 4 0 0 1 0 17 2 1893.9354 Q92576-2;Q92576;E7EVH3;E9PE34;E7ER40 Q92576-2 785 801 PHF3 PHD finger protein 3 yes no 3;4 7.5408E-07 81.656 By MS/MS By matching By MS/MS By MS/MS By matching By matching 2 1 1 1 1 6590600 1984800 0 1951700 1400800 901080 352280 6666 1353 6762 29565;29566;29567;29568;29569;29570 19538;19539;19540 19539 2 SEKLKDLFDYSPPLHK TQSPEQVKSEKLKDLF DYSPPLHKNLDAREKS K S E H K N 0 0 0 2 0 0 1 0 1 0 3 3 0 1 2 2 0 0 1 0 0 16 2 1916.0044 Q9NYF8-2;Q9NYF8;E9PK09;E9PQN2;E9PKI6;Q9NYF8-3;E9PK91 Q9NYF8-2 500 515 BCLAF1 Bcl-2-associated transcription factor 1 no no 4 0.0089452 45.384 By matching By matching By matching By MS/MS By matching By matching 1 5462700 0 0 0 5462700 0 0 6667 1563;452 6763 29571 19541 19541 1 SEKLPEDLTVK PVATNSCKSEKLPEDL LPEDLTVKSEKDKSFE K S E V K S 0 0 0 1 0 0 2 0 0 0 2 2 0 0 1 1 1 0 0 1 0 11 1 1257.6816 F5H4I8;E9PCM7;F5H2R1;P37275;Q2KJ05;F5H8J0;F5H838;Q5VZ84;G3V1R3;F5H1R1;H0YME0;H0YKM9 F5H4I8 438 448 ZEB1 Zinc finger E-box-binding homeobox 1 yes no 2;3 7.5638E-20 119.03 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 1 7047500 0 1272400 1799200 1408900 545930 2021100 6668 415 6764 29572;29573;29574;29575;29576;29577 19542;19543;19544;19545 19545 4 SEKPLENGTGFQAQDISGQK EPGNQEKKSEKPLENG AQDISGQKNGRGVIFG K S E Q K N 1 0 1 1 0 3 2 3 0 1 1 2 0 1 1 2 1 0 0 0 0 20 1 2133.0338 P49792;E9PGT0 P49792 1912 1931 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 3 0.0020191 50.87 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 7292600 2078500 1968300 2436900 808960 0 0 6669 945 6765 29578;29579;29580;29581 19546;19547;19548;19549 19547 4 SELGNQSPSTSSR MQNDSILKSELGNQSP QSPSTSSR________ K S E S R - 0 1 1 0 0 1 1 1 0 0 1 0 0 0 1 5 1 0 0 0 0 13 0 1348.6219 H0YD16;E9PKD1;Q5JTV8 H0YD16 186 198 TOR1AIP1 Torsin-1A-interacting protein 1 yes no 2 0.0065897 59.116 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1108500 0 268480 0 0 325290 514730 6670 453 6766 29582;29583;29584 19550 19550 1 SELVANNVTLPAGEQR VLTKDKLKSELVANNV TLPAGEQRKDVYVQLY K S E Q R K 2 1 2 0 0 1 2 1 0 0 2 0 0 0 1 1 1 0 0 2 0 16 0 1696.8744 P42166;P42167;P42167-2;G5E972 P42166 18 33 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2 2.0587E-164 160.03 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 33542000 13402000 4551600 9670900 0 0 5917400 6671 913;914 6767 29585;29586;29587;29588 19551;19552;19553;19554;19555 19555 4 SELVANNVTLPAGEQRK VLTKDKLKSELVANNV LPAGEQRKDVYVQLYL K S E R K D 2 1 2 0 0 1 2 1 0 0 2 1 0 0 1 1 1 0 0 2 0 17 1 1824.9694 P42166;P42167;P42167-2;G5E972 P42166 18 34 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2;3 5.9592E-14 99.344 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 2 473150000 80437000 120980000 56351000 50787000 36240000 128360000 6672 913;914 6768 29589;29590;29591;29592;29593;29594;29595;29596;29597;29598;29599 19556;19557;19558;19559;19560;19561;19562;19563;19564 19557 9 SEMTPEELQK MSLLNKPKSEMTPEEL MTPEELQKREEEEFNT K S E Q K R 0 0 0 0 0 1 3 0 0 0 1 1 1 0 1 1 1 0 0 0 0 10 0 1190.5489 P62316 P62316 9 18 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 2 0.0086142 80.916 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 11741000 1977100 0 0 0 4038300 5726100 6673 990 6769 29600;29601;29602 19565;19566 19565 2 SENGLQNESLSSTHHTDGLSK QKVADRTKSENGLQNE HHTDGLSKIRLNYSDE K S E S K I 0 0 2 1 0 1 2 2 2 0 3 1 0 0 0 5 2 0 0 0 0 21 0 2240.0305 Q9GZR1-2;Q9GZR1;E7EQN6 Q9GZR1-2 883 903 SENP6 Sentrin-specific protease 6 yes no 3;4 0.0015888 50.493 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 2 10548000 0 2848000 3073400 0 0 4626900 6674 361 6770 29603;29604;29605;29606;29607;29608 19567;19568;19569 19569 3 SENPRGPLVLPAGGGAQDESGSRIHHK DHKKGLRKSENPRGPL SGSRIHHKNWTLASKR K S E H K N 2 2 1 1 0 1 2 5 2 1 2 1 0 0 3 3 0 0 0 1 0 27 2 2765.3957 Q2TAK8;Q2TAK8-2;H0YFM5 Q2TAK8 183 209 MUM1 PWWP domain-containing protein MUM1 yes no 4;5 2.6552E-15 79.172 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 1 2 2 53267000 0 9445900 20199000 2752300 7159800 13710000 6675 1161 6771 29609;29610;29611;29612;29613;29614;29615;29616;29617 19570;19571;19572;19573 19571 4 SENVDVGKPALGK STRNTPAKSENVDVGK VGKPALGKSILVPNEE K S E G K S 1 0 1 1 0 0 1 2 0 0 1 2 0 0 1 1 0 0 0 2 0 13 1 1312.6987 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 2017 2029 AHCTF1 Protein ELYS yes no 2;3 4.6014E-34 120.84 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 2 2 51937000 12095000 7336600 8731100 6134800 9716600 7923400 6676 1345 6772 29618;29619;29620;29621;29622;29623;29624;29625;29626;29627;29628;29629;29630;29631 19574;19575;19576;19577;19578;19579;19580;19581;19582;19583;19584;19585 19576 12 SEPKPGLPEDLQK KITDVLAKSEPKPGLP GLPEDLQKLMKDYYSS K S E Q K L 0 0 0 1 0 1 2 1 0 0 2 2 0 0 3 1 0 0 0 0 0 13 1 1436.7511 C9J384;E9PHS3;Q9BQ75 C9J384 41 53 CMSS1 Protein CMSS1 yes no 2;3 0.0093598 56.414 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 2 2 2 161960000 3167000 24125000 26198000 20564000 38989000 48918000 6677 225 6773 29632;29633;29634;29635;29636;29637;29638;29639;29640;29641;29642 19586;19587;19588;19589;19590;19591 19586 6 SEPVKEESSELEQPFAQDTSSVGPDRK DILGETCKSEPVKEES SSVGPDRKLAEEEDLF K S E R K L 1 1 0 2 0 2 5 1 0 0 1 2 0 1 3 5 1 0 0 2 0 27 2 2975.3996 Q14151;A8MXT5;C9JPX0;Q15424;F5H1L1;F5H0H3;F5GZU3;B7Z2F6 Q14151 226 252 SAFB2;SAFB Scaffold attachment factor B2;Scaffold attachment factor B1 no no 3;4 2.8573E-190 148.17 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 732940000 320740000 22113000 113180000 17633000 171750000 87533000 6678 1097;1137 6774 29643;29644;29645;29646;29647;29648;29649;29650;29651;29652;29653;29654 19592;19593;19594;19595;19596;19597;19598;19599;19600;19601;19602;19603 19600 12 SEQEFSFDTPADR EQQSYKRKSEQEFSFD SFDTPADRSGWTSASS K S E D R S 1 1 0 2 0 1 2 0 0 0 0 0 0 2 1 2 1 0 0 0 0 13 0 1527.6478 Q99590-2;F8VXG7;Q99590 Q99590-2 812 824 SCAF11 Protein SCAF11 yes no 2 3.4053E-24 116.63 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 25192000 8610500 2442200 6090900 1310700 2838400 3899400 6679 547 6775 29655;29656;29657;29658;29659;29660 19604;19605;19606;19607;19608;19609 19609 6 SEQPTLVTASK LCFCNAEKSEQPTLVT PTLVTASKDGYFKVWI K S E S K D 1 0 0 0 0 1 1 0 0 0 1 1 0 0 1 2 2 0 0 1 0 11 0 1159.6085 Q8IWA0 Q8IWA0 456 466 WDR75 WD repeat-containing protein 75 yes yes 2 0.019417 56.205 By matching By matching By matching By matching By matching By MS/MS 1 1 1616100 0 0 0 0 371210 1244900 6680 1279 6776 29661;29662 19610 19610 1 SEREVSTAPAGTDMPAAK ________________ GTDMPAAKKQKLSSDE M S E A K K 4 1 0 1 0 0 2 1 0 0 0 1 1 0 2 2 2 0 0 1 0 18 1 1816.8625 O75530-3;O75530;O75530-2;F5GY72;E9PJK2 O75530-3 2 19 EED Polycomb protein EED yes no 2 0.0053902 47.68 By MS/MS By matching By matching By matching By matching By matching 1 2990100 2990100 0 0 0 0 0 6681 745 6777 29663 19611 19611 1 SERPSHPLYEPEPEPR ERATPHAKSERPSHPL YEPEPEPRDSPQPGQG K S E P R D 0 2 0 0 0 0 4 0 1 0 1 0 0 0 5 2 0 0 1 0 0 16 1 1918.9173 Q5TGY3 Q5TGY3 190 205 AHDC1 AT-hook DNA-binding motif-containing protein 1 yes yes 3;4 0.012487 44.252 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2 5317000 0 985270 993600 0 406220 2931900 6682 1199 6778 29664;29665;29666;29667;29668 19612;19613 19612 2 SERSSSGLLEWESK SVKVFSGKSERSSSGL GLLEWESKSDALETLG K S E S K S 0 1 0 0 0 0 3 1 0 0 2 1 0 0 0 5 0 1 0 0 0 14 1 1593.7635 P14866;A6NIT8 P14866 539 552 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 2;3 3.0464E-198 167.92 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 3 3 586660000 57918000 66649000 201240000 112020000 16410000 132420000 6683 838 6779 29669;29670;29671;29672;29673;29674;29675;29676;29677;29678;29679;29680;29681;29682;29683;29684 19614;19615;19616;19617;19618;19619;19620;19621;19622 19616 9 SERTESLEAGDDESK QGFEETNKSERTESLE EAGDDESKLDDAHSLG K S E S K L 1 1 0 2 0 0 4 1 0 0 1 1 0 0 0 3 1 0 0 0 0 15 1 1651.7173 Q5T200-2 Q5T200-2 1433 1447 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes yes 3 0.020967 42.314 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1596400 249990 0 497470 0 295660 553250 6684 1188 6780 29685;29686;29687;29688 19623 19623 1 SERYVCAVTR DRVGLITRSERYVCAV RYVCAVTRDSLSNATP R S E T R D 1 2 0 0 1 0 1 0 0 0 0 0 0 0 0 1 1 0 1 2 0 10 1 1239.603 Q9Y314 Q9Y314 218 227 NOSIP Nitric oxide synthase-interacting protein yes yes 3 0.003091 92.943 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 4925600 643130 941380 262390 0 700230 2378400 6685 1642 6781 29689;29690;29691;29692;29693 19624;19625 19624 2 SESALSCLSK LLVSAPSKSESALSCL SALSCLSKQKKKKTKK K S E S K Q 1 0 0 0 1 0 1 0 0 0 2 1 0 0 0 4 0 0 0 0 0 10 0 1080.5121 G3V529;Q9GZR7;Q4V9L5;F5GYL3;F5H4V3 G3V529 783 792 DDX24 ATP-dependent RNA helicase DDX24 yes no 2 0.0030558 92.611 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 22758000 0 0 2540100 3331800 9201200 7685000 6686 588 6782 29694;29695;29696;29697 19626;19627 19626 2 SESALSCLSKQK LLVSAPSKSESALSCL LSCLSKQKKKKTKKPK K S E Q K K 1 0 0 0 1 1 1 0 0 0 2 2 0 0 0 4 0 0 0 0 0 12 1 1336.6657 G3V529;Q9GZR7;Q4V9L5;F5GYL3;F5H4V3 G3V529 783 794 DDX24 ATP-dependent RNA helicase DDX24 yes no 2 1.1388E-192 174.72 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 27819000 8161500 3499200 4529900 3900300 4866100 2862400 6687 588 6783 29698;29699;29700;29701;29702;29703;29704 19628;19629;19630;19631;19632;19633 19631 6 SESFANYIDER EKMNLIQKSESFANYI FANYIDEREKSISELS K S E E R E 1 1 1 1 0 0 2 0 0 1 0 0 0 1 0 2 0 0 1 0 0 11 0 1329.5837 P49454 P49454 997 1007 CENPF Centromere protein F yes yes 2 0.001691 90.697 By matching By MS/MS By matching By matching By matching By matching 1 3535500 0 3535500 0 0 0 0 6688 936 6784 29705 19634 19634 1 SESHTDLTFSR QIIRNYARSESHTDLT HTDLTFSRELTNDERK R S E S R E 0 1 0 1 0 0 1 0 1 0 1 0 0 1 0 3 2 0 0 0 0 11 0 1278.584 O15226;G3V1N1 O15226 616 626 NKRF NF-kappa-B-repressing factor yes no 2;3 3.6261E-08 110.84 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 2 2 2 20357000 1494300 3043700 1361300 2198300 8172000 4087700 6689 578 6785 29706;29707;29708;29709;29710;29711;29712;29713;29714;29715 19635;19636;19637;19638;19639 19639 5 SESHTDLTFSRELTNDERK QIIRNYARSESHTDLT ELTNDERKQIHQIAQK R S E R K Q 0 2 1 2 0 0 3 0 1 0 2 1 0 1 0 3 3 0 0 0 0 19 2 2264.0669 O15226;G3V1N1 O15226 616 634 NKRF NF-kappa-B-repressing factor yes no 4 0.0011022 58.246 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 16046000 2684000 1705200 2304100 5354600 3204300 794310 6690 578 6786 29716;29717;29718;29719;29720;29721 19640 19640 1 SETAPAAPAAAPPAEKAPVK ________________ PAEKAPVKKKAAKKAG M S E V K K 8 0 0 0 0 0 2 0 0 0 0 2 0 0 5 1 1 0 0 1 0 20 1 1872.9945 P16403 P16403 2 21 HIST1H1C Histone H1.2 yes yes 2 0.00012461 79.565 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 28024000 10041000 2845300 2588100 1511500 8031900 3005800 6691 843 6787 29722;29723;29724;29725;29726;29727 19641;19642;19643;19644;19645;19646;19647 19646 7 SETAPAAPAAAPPAEKAPVKK ________________ AEKAPVKKKAAKKAGG M S E K K K 8 0 0 0 0 0 2 0 0 0 0 3 0 0 5 1 1 0 0 1 0 21 2 2001.0895 P16403 P16403 2 22 HIST1H1C Histone H1.2 yes yes 3 2.7932E-06 65.765 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 542650000 311170000 60718000 65940000 39977000 0 64851000 6692 843 6788 29728;29729;29730;29731;29732 19648;19649;19650;19651;19652 19649 5 SETAPAAPAAPAPAEKTPVK ________________ PAEKTPVKKKARKSAG M S E V K K 7 0 0 0 0 0 2 0 0 0 0 2 0 0 5 1 2 0 0 1 0 20 1 1903.0051 P10412 P10412 2 21 HIST1H1E Histone H1.4 yes yes 2 0.00050166 59.372 By matching By MS/MS By matching By matching By matching By matching 1 1 2253600 0 1071400 0 1182200 0 0 6693 818 6789 29733;29734 19653 19653 1 SETAPAAPAAPAPAEKTPVKK ________________ AEKTPVKKKARKSAGA M S E K K K 7 0 0 0 0 0 2 0 0 0 0 3 0 0 5 1 2 0 0 1 0 21 2 2031.1001 P10412 P10412 2 22 HIST1H1E Histone H1.4 yes yes 3;4 2.8991E-15 93.753 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 3 2 1 597460000 261990000 2522200 49604000 53329000 151920000 78094000 6694 818 6790;6791 29735;29736;29737;29738;29739;29740;29741;29742;29743;29744;29745;29746;29747;29748 19654;19655;19656;19657;19658;19659;19660;19661;19662 19659 9 SETAPAETATPAPVEKSPAK ________________ PVEKSPAKKKATKKAA M S E A K K 5 0 0 0 0 0 3 0 0 0 0 2 0 0 4 2 3 0 0 1 0 20 1 1981.0004 P16401 P16401 2 21 HIST1H1B Histone H1.5 yes yes 2;3 0.00034648 60.764 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 2 1 1 32891000 29047000 795330 789900 692400 977290 588680 6695 842 6792;6793 29749;29750;29751;29752;29753;29754;29755 19663;19664;19665;19666;19667 19665 5 SETAPAETATPAPVEKSPAKK ________________ VEKSPAKKKATKKAAG M S E K K K 5 0 0 0 0 0 3 0 0 0 0 3 0 0 4 2 3 0 0 1 0 21 2 2109.0954 P16401 P16401 2 22 HIST1H1B Histone H1.5 yes yes 3 1.5324E-05 72.21 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 36180000 23336000 229060 0 5537900 0 7077300 6696 842 6794 29756;29757;29758;29759 19668;19669 19668 2 SETCNEDLAGTTDEK IVVIDDDKSETCNEDL LAGTTDEKSLERVSLS K S E E K S 1 0 1 2 1 0 3 1 0 0 1 1 0 0 0 1 3 0 0 0 0 15 0 1668.6785 B7Z8R4;Q15723-4;E9PCX3;Q15723-2;Q15723-3;Q15723-1;Q15723;D6R9B1 B7Z8R4 107 121 ELF2 ETS-related transcription factor Elf-2 yes no 2 0.00047238 71.781 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 6326400 0 1382500 1120300 626220 1122600 2074800 6697 196 6795 29760;29761;29762;29763;29764 19670;19671;19672;19673;19674 19673 5 SETRENGVTDDLDAPKAK HHYDSDEKSETRENGV DLDAPKAKKSKMKEKL K S E A K K 2 1 1 3 0 0 2 1 0 0 1 2 0 0 1 1 2 0 0 1 0 18 2 1944.9389 F5H3H6;Q9BQ39 F5H3H6 45 62 DDX50 ATP-dependent RNA helicase DDX50 yes no 3;4 0.0015314 65.905 By MS/MS By matching By matching By MS/MS By matching By matching 2 1 2 2 2 2 18327000 2895200 2825900 3242700 2159600 3454700 3749400 6698 515 6796 29765;29766;29767;29768;29769;29770;29771;29772;29773;29774;29775 19675;19676;19677 19676 3 SETSKPGPSGLQAK LSLPGSSKSETSKPGP GPSGLQAKLASLRKST K S E A K L 1 0 0 0 0 1 1 2 0 0 1 2 0 0 2 3 1 0 0 0 0 14 1 1385.7151 Q14CA3;Q14669;B4DYJ6;G5E9G6;H7C1L9 Q14CA3 327 340 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 2;3 3.6841E-08 99.732 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 2 2 32496000 3918300 4631900 10518000 3038300 3833000 6555800 6699 1122 6797 29776;29777;29778;29779;29780;29781;29782;29783;29784;29785;29786;29787 19678;19679;19680;19681 19679 4 SETTSEHTCQLCGGWFDTK RVRKAIEKSETTSEHT CGGWFDTKIGLSNHVR K S E T K I 0 0 0 1 2 1 2 2 1 0 1 1 0 1 0 2 4 1 0 0 0 19 0 2242.9259 Q9H582-2;Q9H582;F5GWV4 Q9H582-2 1032 1050 ZNF644 Zinc finger protein 644 yes no 3 0.00052836 63.998 By matching By MS/MS By matching By matching By matching By matching 1 8518100 0 8518100 0 0 0 0 6700 1492 6798 29788 19682 19682 1 SEVIEDSDVETVSEK LGRTQKSKSEVIEDSD DVETVSEKKTFATRQV K S E E K K 0 0 0 2 0 0 4 0 0 1 0 1 0 0 0 3 1 0 0 3 0 15 0 1664.7629 Q56NI9;E5RFE4 Q56NI9 238 252 ESCO2 N-acetyltransferase ESCO2 yes no 2 1.1746E-20 108.63 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 29184000 0 7863700 8624100 3692500 3806900 5197000 6701 1176 6799 29789;29790;29791;29792;29793 19683;19684;19685;19686;19687;19688;19689 19684 7 SEVIEDSDVETVSEKK LGRTQKSKSEVIEDSD VETVSEKKTFATRQVP K S E K K T 0 0 0 2 0 0 4 0 0 1 0 2 0 0 0 3 1 0 0 3 0 16 1 1792.8578 Q56NI9;E5RFE4 Q56NI9 238 253 ESCO2 N-acetyltransferase ESCO2 yes no 2;3 2.5576E-18 102.64 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 2 2 19571000 2610600 2074400 3700700 851700 3174100 7159700 6702 1176 6800 29794;29795;29796;29797;29798;29799;29800;29801;29802 19690;19691;19692;19693;19694;19695;19696 19691 7 SEVPCAPMPK GKESDLRRSEVPCAPM VPCAPMPKKTHQPSDE R S E P K K 1 0 0 0 1 0 1 0 0 0 0 1 1 0 3 1 0 0 0 1 0 10 0 1114.5151 Q99575 Q99575 741 750 POP1 Ribonucleases P/MRP protein subunit POP1 yes yes 2 0.020661 63.076 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 6502900 1221900 1570600 1259700 740270 1710400 0 6703 1428 6801 29803;29804;29805;29806;29807 19697;19698 19698 2 SEVSTDLIQANPK RDYNNREKSEVSTDLI DLIQANPKQGALAKKS K S E P K Q 1 0 1 1 0 1 1 0 0 1 1 1 0 0 1 2 1 0 0 1 0 13 0 1400.7147 Q9NPC7-3;Q9NPC7-2;Q9NPC7 Q9NPC7-3 156 168 MYNN Myoneurin yes no 2 0.0015287 88.224 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 23477000 3397000 4245800 4004600 2673100 2395200 6761700 6704 1524 6802 29808;29809;29810;29811;29812;29813 19699;19700;19701;19702;19703 19702 5 SEVSTDLIQANPKQGALAK RDYNNREKSEVSTDLI PKQGALAKKSSQTKKK K S E A K K 3 0 1 1 0 2 1 1 0 1 2 2 0 0 1 2 1 0 0 1 0 19 1 1969.048 Q9NPC7-3;Q9NPC7-2;Q9NPC7 Q9NPC7-3 156 174 MYNN Myoneurin yes no 3 0.00082142 62.525 By MS/MS By matching By matching By matching By matching By matching 1 3204600 3204600 0 0 0 0 0 6705 1524 6803 29814 19704 19704 1 SEVVESTTESQDKENSHQK LRRSSRRRSEVVESTT DKENSHQKKERRKEEE R S E Q K K 0 0 1 1 0 2 4 0 1 0 0 2 0 0 0 4 2 0 0 2 0 19 1 2160.9771 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1422 1440 RIF1 Telomere-associated protein RIF1 yes no 3;4 0.0027822 50.376 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 2 1 2 2 17362000 1527600 1101200 5766200 1604400 1978700 5383500 6706 1201 6804 29815;29816;29817;29818;29819;29820;29821;29822;29823 19705;19706;19707;19708;19709;19710 19707 6 SEYIETASGNK LGELLYNKSEYIETAS IETASGNKVSRQSVLC K S E N K V 1 0 1 0 0 0 2 1 0 1 0 1 0 0 0 2 1 0 1 0 0 11 0 1197.5513 H3BUD2;H3BS05;H3BQA4;H3BN51;H3BR94;Q9BTE1 H3BUD2 11 21 DCTN5 Dynactin subunit 5 yes no 2 0.0033321 83.182 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 4703300 574030 528730 1314700 555470 612020 1118400 6707 632 6805 29824;29825;29826;29827;29828;29829 19711;19712;19713;19714;19715 19713 5 SEYSVHSSLASK RRVITISKSEYSVHSS VHSSLASKVDVEQVVM K S E S K V 1 0 0 0 0 0 1 0 1 0 1 1 0 0 0 5 0 0 1 1 0 12 0 1293.6201 F5GZ80;E9PC26;F5GXI5;O43683 F5GZ80 217 228 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes no 2 0.0024886 74.392 By matching By matching By matching By matching By matching By MS/MS 1 627470 0 0 0 0 0 627470 6708 410 6806 29830 19716;19717 19717 2 SFAGNLNTYK DAVRLRGRSFAGNLNT AGNLNTYKRLAIKLPD R S F Y K R 1 0 2 0 0 0 0 1 0 0 1 1 0 1 0 1 1 0 1 0 0 10 0 1113.5455 Q01813;H0Y3P8;Q5VSR7;B1APP6 Q01813 386 395 PFKP 6-phosphofructokinase type C yes no 2 0.025569 59.198 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 11669000 1536900 2888400 2574400 0 4669200 0 6709 1031 6807 29831;29832;29833;29834 19718 19718 1 SFAQSSGLTK HYCHECGKSFAQSSGL AQSSGLTKHRRIHTGE K S F T K H 1 0 0 0 0 1 0 1 0 0 1 1 0 1 0 3 1 0 0 0 0 10 0 1024.5189 B7Z7H3;Q969J2;H7C1Y5;H7BY15 B7Z7H3 173 182 ZKSCAN4 Zinc finger protein with KRAB and SCAN domains 4 yes no 2 0.0095763 75.566 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 9759700 1547700 2061300 0 1992200 0 4158400 6710 194 6808 29835;29836;29837;29838 19719 19719 1 SFATASHRNTEEEGLKYK SVLADQGKSFATASHR EEEGLKYKSKVSLKGN K S F Y K S 2 1 1 0 0 0 3 1 1 0 1 2 0 1 0 2 2 0 1 0 0 18 2 2067.0021 Q9NYF8-2;Q9NYF8;E9PK09;E9PQN2;E9PKI6;Q9NYF8-3;E9PK91 Q9NYF8-2 420 437 BCLAF1 Bcl-2-associated transcription factor 1 no no 4 1.9387E-08 93.106 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2 1 122010000 29769000 7771600 18457000 17690000 24592000 23728000 6711 1563;452 6809 29839;29840;29841;29842;29843;29844;29845;29846 19720;19721;19722;19723;19724;19725 19720 6 SFCISTLANTK DEPGKRRKSFCISTLA ISTLANTKATSQFKGY K S F T K A 1 0 1 0 1 0 0 0 0 1 1 1 0 1 0 2 2 0 0 0 0 11 0 1240.6122 Q69YH5;E9PEI0 Q69YH5 977 987 CDCA2 Cell division cycle-associated protein 2 yes no 2 0.0042884 77.674 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 19355000 0 7685300 10786000 0 883480 0 6712 1219 6810 29847;29848;29849 19726;19727 19727 1 SFDPSAREPPGSTAGLPQEPK QTLFGKKKSFDPSARE AGLPQEPKTTAEDGVP K S F P K T 2 1 0 1 0 1 2 2 0 0 1 1 0 1 5 3 1 0 0 0 0 21 1 2167.0546 Q9BTC0 Q9BTC0 1327 1347 DIDO1 Death-inducer obliterator 1 yes yes 3 0.0029775 47.729 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 15449000 3353000 2722400 3629900 855000 360850 4528300 6713 1447 6811 29850;29851;29852;29853;29854;29855 19728;19729;19730;19731 19728 4 SFEAPATINSASLHPEK AVSLDPIKSFEAPATI SASLHPEKEFLVAGGE K S F E K E 3 0 1 0 0 0 2 0 1 1 1 1 0 1 2 3 1 0 0 0 0 17 0 1797.8897 B0AZV0;Q9Y3F4;B4DNJ6 B0AZV0 125 141 STRAP Serine-threonine kinase receptor-associated protein yes no 2;3 2.9357E-13 95.662 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 27148000 13429000 2871400 4471000 890770 1698200 3787400 6714 55 6812 29856;29857;29858;29859;29860;29861;29862 19732;19733;19734;19735;19736;19737 19736 6 SFFSVESGTK PGESSNNRSFFSVESG FSVESGTKMSGLHISG R S F T K M 0 0 0 0 0 0 1 1 0 0 0 1 0 2 0 3 1 0 0 1 0 10 0 1087.5186 Q14966-3;Q14966;Q14966-4;Q14966-2;C9JBI6;F5H330 Q14966-3 283 292 ZNF638 Zinc finger protein 638 yes no 2 0.010869 72.2 By matching By matching By matching By matching By matching By MS/MS 1 1197400 0 0 0 0 0 1197400 6715 1118 6813 29863 19738 19738 1 SFGQFNPGCVER TTEDTIKKSFGQFNPG FNPGCVERVKKIRDYA K S F E R V 0 1 1 0 1 1 1 2 0 0 0 0 0 2 1 1 0 0 0 1 0 12 0 1396.6194 D6R9D6;A0AV96-2;B7Z8Z7;A0AV96 D6R9D6 265 276 RBM47 RNA-binding protein 47 yes no 2 1.7162E-38 130.69 By matching By matching By matching By matching By matching By MS/MS 1 1 9438800 0 1987200 0 0 0 7451600 6716 0 6814 29864;29865 19739 19739 1 SFGRGSTLIQHQR NICGICGKSFGRGSTL STLIQHQRIHTGEKPY K S F Q R I 0 2 0 0 0 2 0 2 1 1 1 0 0 1 0 2 1 0 0 0 0 13 1 1485.7801 H3BS42;Q9H5H4;B7Z2Y7 H3BS42 238 250 ZNF768 Zinc finger protein 768 yes no 3 0.0034634 63.662 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 7980900 950110 920050 1968100 849520 1634700 1658400 6717 646 6815 29866;29867;29868;29869;29870;29871 19740;19741;19742;19743;19744 19744 5 SFGSTCQLSEK ENMTLQPKSFGSTCQL STCQLSEKFIKAAIGC K S F E K F 0 0 0 0 1 1 1 1 0 0 1 1 0 1 0 3 1 0 0 0 0 11 0 1242.5551 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2 P11388 387 397 TOP2A DNA topoisomerase 2-alpha yes no 2 0.0028426 85.522 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 26162000 969480 4586600 4368300 2147800 0 14090000 6718 655 6816 29872;29873;29874;29875;29876 19745;19746;19747;19748;19749 19746 5 SFGSTCQLSEKFIK ENMTLQPKSFGSTCQL QLSEKFIKAAIGCGIV K S F I K A 0 0 0 0 1 1 1 1 0 1 1 2 0 2 0 3 1 0 0 0 0 14 1 1630.8025 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2 P11388 387 400 TOP2A DNA topoisomerase 2-alpha yes no 3 0.00027913 74.537 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 14613000 0 6564000 4765200 1991400 1292700 0 6719 655 6817 29877;29878;29879;29880 19750;19751;19752 19751 2 SFHKPVTSYQEACSIPGIGK AKAINALKSFHKPVTS CSIPGIGKRMAEKIIE K S F G K R 1 0 0 0 1 1 1 2 1 2 0 2 0 1 2 3 1 0 1 1 0 20 1 2205.0888 Q5JQP8;Q9HAJ3;Q9UGP5;Q5JQN9 Q5JQP8 200 219 POLL DNA polymerase lambda yes no 4 0.0027881 52.731 By MS/MS By matching By matching By matching By matching By matching 1 3911200 3911200 0 0 0 0 0 6720 1183 6818 29881 19753 19753 0 SFHTYDVQK YVTTCVGKSFHTYDVQ FHTYDVQKLSLVAVSN K S F Q K L 0 0 0 1 0 1 0 0 1 0 0 1 0 1 0 1 1 0 1 1 0 9 0 1123.5298 Q8NI36;D6R922 Q8NI36 105 113 WDR36 WD repeat-containing protein 36 yes no 2 1.4318E-16 125.71 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 6721 1331 6819 29882 19754 19754 1 SFIPKDNQNFCVPCYEK CQQPIGTKSFIPKDNQ FCVPCYEKQHAMQCVQ K S F E K Q 0 0 2 1 2 1 1 0 0 1 0 2 0 2 2 1 0 0 1 1 0 17 1 2144.9659 Q14192 Q14192 140 156 FHL2 Four and a half LIM domains protein 2 yes yes 3 0.026715 38.546 By matching By MS/MS By matching By matching By matching By matching 1 4167000 0 4167000 0 0 0 0 6722 1101 6820 29883 19755 19755 1 SFIQSSELTQHQR YRCTECGKSFIQSSEL SELTQHQRTHTGEKPY K S F Q R T 0 1 0 0 0 3 1 0 1 1 1 0 0 1 0 3 1 0 0 0 0 13 0 1559.7692 Q9UEG4 Q9UEG4 326 338 ZNF629 Zinc finger protein 629 yes yes 2 0.01657 50.659 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2667000 0 0 0 357100 395070 1914800 6723 1586 6821 29884;29885;29886 19756 19756 1 SFISPIPSK LIMRRRVRSFISPIPS FISPIPSKRQSQDVKN R S F S K R 0 0 0 0 0 0 0 0 0 2 0 1 0 1 2 3 0 0 0 0 0 9 0 974.54368 Q9UGU0-2;Q9UGU0 Q9UGU0-2 1259 1267 TCF20 Transcription factor 20 yes no 2 0.0084728 87.258 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1951600 0 452690 0 528580 0 970290 6724 1591 6822 29887;29888;29889 19757 19757 1 SFISSGELNK YICGICGKSFISSGEL ISSGELNKHFRSHTVV K S F N K H 0 0 1 0 0 0 1 1 0 1 1 1 0 1 0 3 0 0 0 0 0 10 0 1080.5451 Q9NPC7-3;Q9NPC7-2;Q9NPC7 Q9NPC7-3 479 488 MYNN Myoneurin yes no 2 0.0057609 86.344 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 2 1 1 1 1 1 22955000 6421100 1843300 3119800 3640600 4554100 3376600 6725 1524 6823 29890;29891;29892;29893;29894;29895;29896 19758;19759;19760;19761;19762;19763 19763 6 SFLKGLSDKQR STDWKEAKSFLKGLSD KGLSDKQREEHYFCKD K S F Q R E 0 1 0 1 0 1 0 1 0 0 2 2 0 1 0 2 0 0 0 0 0 11 2 1277.7092 Q9BQ69 Q9BQ69 100 110 MACROD1 O-acetyl-ADP-ribose deacetylase MACROD1 yes yes 3 0.01581 73.9 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 4939900 0 1740300 1967500 928410 0 303650 6726 1439 6824 29897;29898;29899;29900 19764 19764 1 SFLQRVNASPAGR YQCHSLLKSFLQRVNA VNASPAGRRKPCAKVG K S F G R R 2 2 1 0 0 1 0 1 0 0 1 0 0 1 1 2 0 0 0 1 0 13 1 1401.7477 Q8N554-2;Q8N554;H3BPT7;H3BTT0;H3BTK0 Q8N554-2 77 89 ZNF276 Zinc finger protein 276 yes no 3 0.0010613 90.861 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6754800 0 1262800 761760 0 1401100 3329200 6727 1300 6825 29901;29902;29903;29904 19765 19765 1 SFMMEVKDPNMK KKSTGIPRSFMMEVKD EVKDPNMKGAMLTNTG R S F M K G 0 0 1 1 0 0 1 0 0 0 0 2 3 1 1 1 0 0 0 1 0 12 1 1455.656 Q7Z6E9;Q7Z6E9-2;Q7Z6E9-4;H3BSK8;H3BUN0 Q7Z6E9 197 208 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 3 0.027332 48.948 By matching By matching By matching By matching By matching By MS/MS 1 690030 0 0 0 0 0 690030 6728 1255 6826 29905 19766 19766 1 SFNHNAHLTVHK YKCTDCGKSFNHNAHL NAHLTVHKRIHTGERP K S F H K R 1 0 2 0 0 0 0 0 3 0 1 1 0 1 0 1 1 0 0 1 0 12 0 1403.7058 P17098 P17098 265 276 ZNF8 Zinc finger protein 8 yes yes 3 0.024127 47.991 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1854000 0 543720 1310300 0 0 0 6729 847 6827 29906;29907 19767;19768 19767 2 SFNYSPNSSTSEVSSTSASK SAQPFIPKSFNYSPNS VSSTSASKASIGQSPG K S F S K A 1 0 2 0 0 0 1 0 0 0 0 1 0 1 1 9 2 0 1 1 0 20 0 2065.9076 Q5VT52-3;Q5VT52;B4E2Q6;Q5VT52-2 Q5VT52-3 563 582 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes no 2 0.0081901 49.592 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5067000 0 1150900 1841900 0 745840 1328300 6730 1202 6828 29908;29909;29910;29911 19769 19769 0 SFPIVTEK LKTNDEDKSFPIVTEK SFPIVTEKMQGKPVCS K S F E K M 0 0 0 0 0 0 1 0 0 1 0 1 0 1 1 1 1 0 0 1 0 8 0 919.50148 Q56NI9;E5RFE4;E5RFP7;E5RIE3 Q56NI9 118 125 ESCO2 N-acetyltransferase ESCO2 yes no 2 0.039944 68.224 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 22209000 1864600 3485300 4551500 1997200 1349100 8961400 6731 1176 6829 29912;29913;29914;29915;29916;29917 19770 19770 1 SFQDYTGQK EQEERRRRSFQDYTGQ FQDYTGQKITLEAVLN R S F Q K I 0 0 0 1 0 2 0 1 0 0 0 1 0 1 0 1 1 0 1 0 0 9 0 1072.4825 Q9NP64-2;B4DY38;Q9NP64;E7EPF0 Q9NP64-2 90 98 ZCCHC17 Nucleolar protein of 40 kDa yes no 2 0.021781 68.846 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 7800100 0 1521500 0 1031400 1913400 3333800 6732 141 6830 29918;29919;29920;29921 19771;19772 19772 2 SFQQCAGFIR KVKGLGPKSFQQCAGF QQCAGFIRINQDYIRT K S F I R I 1 1 0 0 1 2 0 1 0 1 0 0 0 2 0 1 0 0 0 0 0 10 0 1212.571 Q8N5C6;Q8N5C6-2;B7Z6X7 Q8N5C6 758 767 SRBD1 S1 RNA-binding domain-containing protein 1 yes no 2 0.0093219 76.228 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 26463000 3014300 2447900 2005800 1761000 8171400 9063100 6733 1302 6831 29922;29923;29924;29925;29926;29927 19773;19774;19775 19775 3 SFQQSSLSR ________________ FQQSSLSRDSQGHGRD K S F S R D 0 1 0 0 0 2 0 0 0 0 1 0 0 1 0 4 0 0 0 0 0 9 0 1038.5094 P43243;A8MXP9;D6REM6;D6R991;Q68E03;D6RB45;D6R9F3;D6RBS2;D6RCM3;D6REK4;D6R8Z5 P43243 4 12 MATR3;DKFZp686L22104 Matrin-3 yes no 2 0.032961 63.184 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 15370000 307790 5033800 6058600 0 3970200 0 6734 52 6832 29928;29929;29930;29931 19776 19776 1 SFQTRDNQGILYEAAPTSTLTCDSGPQKQK SGRQWKLKSFQTRDNQ DSGPQKQKFSLKLSTS K S F Q K F 2 1 1 2 1 4 1 2 0 1 2 2 0 1 2 3 4 0 1 0 0 30 2 3340.5994 E7EMG6;Q8IV63-2;Q8IV63-3;Q8IV63 E7EMG6 170 199 VRK3 Inactive serine/threonine-protein kinase VRK3 yes no 4 2.8686E-05 41.746 By matching By MS/MS By matching By matching By matching By matching 1 13971000 0 13971000 0 0 0 0 6735 346 6833 29932 19777 19777 1 SFRHCTASTLPK QTSLFIARSFRHCTAS CTASTLPKSLLKPFCA R S F P K S 1 1 0 0 1 0 0 0 1 0 1 1 0 1 1 2 2 0 0 0 0 12 1 1403.698 Q14008-2;Q14008;Q14008-3 Q14008-2 423 434 CKAP5 Cytoskeleton-associated protein 5 yes no 3 0.010013 59.116 By matching By matching By matching By matching By matching By MS/MS 1 1 1721000 0 0 0 0 777990 943020 6736 1093 6834 29933;29934 19778 19778 1 SFRQLSHLQQHTR YSCNFCEKSFRQLSHL SHLQQHTRIHTGDRPY K S F T R I 0 2 0 0 0 3 0 0 2 0 2 0 0 1 0 2 1 0 0 0 0 13 1 1636.8546 Q8TF68-3;F8W6Q3;Q8TF68-2;Q8TF68;E9PHB3;Q5T0B9 Q8TF68-3 237 249 ZNF384;ZNF362 Zinc finger protein 384;Zinc finger protein 362 yes no 4 0.0017718 83.869 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 26907000 3815700 962310 3064700 3571900 6904900 8587400 6737 555 6835 29935;29936;29937;29938;29939;29940 19779;19780;19781;19782;19783;19784 19782 6 SFRQMSDLVK AVCGECGKSFRQMSDL RQMSDLVKHQRTHTGE K S F V K H 0 1 0 1 0 1 0 0 0 0 1 1 1 1 0 2 0 0 0 1 0 10 1 1209.6176 Q96MX3;E9PQ92;E9PJ50 Q96MX3 120 129 ZNF48 Zinc finger protein 48 yes no 3 1.3652E-05 111.86 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 9491000 1798800 1674700 1450300 1845200 283270 2438700 6738 1408 6836 29941;29942;29943;29944;29945;29946 19785;19786;19787;19788 19786 4 SFRYENESLQNGRK DVITIIDRSFRYENES ESLQNGRKSTEFPRKI R S F R K S 0 2 2 0 0 1 2 1 0 0 1 1 0 1 0 2 0 0 1 0 0 14 2 1726.8387 P46013;F5H4V4;P46013-2 P46013 94 107 MKI67 Antigen KI-67 no no 3;4 8.9877E-05 89.46 By matching By matching By matching By matching By MS/MS By MS/MS 1 2 2 1 2 2 18226000 423400 3563800 2650600 566800 2849400 8172200 6739 919;920 6837 29947;29948;29949;29950;29951;29952;29953;29954;29955;29956 19789;19790 19789 2 SFSCPEPACGK KYQHIHQKSFSCPEPA CPEPACGKSFNFKKHL K S F G K S 1 0 0 0 2 0 1 1 0 0 0 1 0 1 2 2 0 0 0 0 0 11 0 1238.506 H0YDF5;H0YCH4;Q9BU19-3;E7ESF3;Q9BU19-2;Q9BU19;Q9BU19-5 H0YDF5 39 49 ZNF692 Zinc finger protein 692 yes no 2 0.0037255 80.916 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 4512800 0 768570 1434900 0 639400 1670000 6740 374 6838 29957;29958;29959;29960;29961 19791;19792 19792 2 SFSEFGK VTEEILEKSFSEFGKL KSFSEFGKLERVKKLK K S F G K L 0 0 0 0 0 0 1 1 0 0 0 1 0 2 0 2 0 0 0 0 0 7 0 800.37047 O43390;O43390-2;E7ETM7;Q2L7G6 O43390 360 366 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes no 1;2 3.388E-08 124.59 By matching By matching By MS/MS By matching By MS/MS By matching 2 1 8205700 0 0 4013700 0 4192100 0 6741 715 6839 29962;29963;29964 19793;19794;19795 19793 3 SFSHSFSALAK TLLHLAAKSFSHSFSA HSFSALAKFHEVFKTL K S F A K F 2 0 0 0 0 0 0 0 1 0 1 1 0 2 0 4 0 0 0 0 0 11 0 1180.5877 Q09161 Q09161 558 568 NCBP1 Nuclear cap-binding protein subunit 1 yes yes 2 0.0048417 74.962 By matching By matching By matching By matching By matching By MS/MS 1 1 6638200 0 0 697880 0 0 5940300 6742 1052 6840 29965;29966 19796 19796 1 SFSNSSSFGVHHR YICCECGKSFSNSSSF SSFGVHHRTHTGERPY K S F H R T 0 1 1 0 0 0 0 1 2 0 0 0 0 2 0 5 0 0 0 1 0 13 0 1447.6593 Q5VV52-2;Q5VV50;Q5VV52;Q5VV52-3 Q5VV52-2 204 216 ZNF691 Zinc finger protein 691 yes no 3 0.0018599 68.676 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 7017500 0 680930 1626800 506830 938090 3264900 6743 1206 6841 29967;29968;29969;29970;29971 19797;19798 19798 2 SFSQSGLIQHQR YQCKECGKSFSQSGLI SGLIQHQRIHTGEKPY K S F Q R I 0 1 0 0 0 3 0 1 1 1 1 0 0 1 0 3 0 0 0 0 0 12 0 1386.7004 O43309 O43309 450 461 ZSCAN12 Zinc finger and SCAN domain-containing protein 12 yes yes 2 0.023396 61.233 By matching By matching By matching By matching By matching By MS/MS 1 772820 0 0 0 0 0 772820 6744 714 6842 29972 19799 19799 0 SFSQSSNLITHVR YKCPECGKSFSQSSNL SNLITHVRTHMDENLF K S F V R T 0 1 1 0 0 1 0 0 1 1 1 0 0 1 0 4 1 0 0 1 0 13 0 1474.7528 Q9UEG4 Q9UEG4 494 506 ZNF629 Zinc finger protein 629 yes yes 3 0.032358 41.621 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 13357000 2165300 1829800 1489400 1086800 1485000 5300300 6745 1586 6843 29973;29974;29975;29976;29977;29978 19800 19800 1 SFSQSSSLSR YKCKECEKSFSQSSSL SQSSSLSRHKRIHTRE K S F S R H 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 6 0 0 0 0 0 10 0 1084.5149 Q8N720;Q8N720-3 Q8N720 248 257 ZNF655 Zinc finger protein 655 yes no 2 0.0087566 79.201 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 8351100 1751400 740380 1342900 1227100 1671200 1618100 6746 1307 6844 29979;29980;29981;29982;29983;29984 19801;19802;19803 19803 3 SFSRPDHLNSHVR YNCSHCGKSFSRPDHL DHLNSHVRQVHSTERP K S F V R Q 0 2 1 1 0 0 0 0 2 0 1 0 0 1 1 3 0 0 0 1 0 13 1 1550.7702 C6G496;P56270;G5E927;I3L2Z5;F5H7A6;H3BQI4 C6G496 322 334 MAZ Myc-associated zinc finger protein yes no 3 1.8956E-46 126.34 By matching By matching By matching By matching By MS/MS By MS/MS 2 1 1 2 1 28876000 0 3798000 4269000 3188600 10004000 7615900 6747 219 6845 29985;29986;29987;29988;29989;29990;29991 19804;19805 19804 2 SFSRSDHLALHMK FQCGVCNRSFSRSDHL DHLALHMKRHQN____ R S F M K R 1 1 0 1 0 0 0 0 2 0 2 1 1 1 0 3 0 0 0 0 0 13 1 1527.7616 A2TJX0;B4DL96;Q13887 A2TJX0 350 362 KLF5 Krueppel-like factor 5 yes no 3 0.033102 66.393 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 6741700 1001100 177370 769030 955750 1681900 2156500 6748 9 6846 29992;29993;29994;29995;29996;29997 19806;19807 19806 0 SFSRSPSDARQPHYGAPAPR ATAAGGCRSFSRSPSD HYGAPAPRG_______ R S F P R G 3 3 0 1 0 1 0 1 1 0 0 0 0 1 4 4 0 0 1 0 0 20 2 2183.062 H7C561;H7C0N4 H7C561 272 291 SF1 no no 4 0.016513 37.687 By matching By matching By matching By matching By matching By MS/MS 1 1727300 0 0 0 0 0 1727300 6749 674;664 6847 29998 19808 19808 1 SFSTASAITPSVSR SFRSGGSRSFSTASAI AITPSVSRTSFTSVSR R S F S R T 2 1 0 0 0 0 0 0 0 1 0 0 0 1 1 5 2 0 0 1 0 14 0 1409.7151 P13647;CON__P13647;F8VV57;E7EU87;CON__Q5XQN5;F8VU69 P13647 16 29 KRT5 Keratin, type II cytoskeletal 5 yes no 2 6.7963E-05 91.307 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 29024000 1998500 2631500 0 13766000 1073600 9554400 + 6750 299 6848 29999;30000;30001;30002;30003 19809;19810;19811;19812 19809 4 SFSTASAITPSVSRTSFTSVSR SFRSGGSRSFSTASAI TSFTSVSRSGGGGGGG R S F S R S 2 2 0 0 0 0 0 0 0 1 0 0 0 2 1 8 4 0 0 2 0 22 1 2275.1444 P13647;CON__P13647;F8VV57;E7EU87;CON__Q5XQN5;F8VU69 P13647 16 37 KRT5 Keratin, type II cytoskeletal 5 yes no 3 0.0031886 47.726 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 43607000 13105000 0 0 30501000 0 0 + 6751 299 6849 30004;30005 19813;19814;19815 19814 3 SFSVSSNLINHQR YKCPECGKSFSVSSNL SNLINHQRIHRGERPY K S F Q R I 0 1 2 0 0 1 0 0 1 1 1 0 0 1 0 4 0 0 0 1 0 13 0 1487.7481 Q9UEG4 Q9UEG4 410 422 ZNF629 Zinc finger protein 629 yes yes 2;3 0.0015009 81.676 By MS/MS By matching By MS/MS By matching By matching By matching 2 1 1 5599900 3103800 0 1674500 0 821690 0 6752 1586 6850 30006;30007;30008;30009 19816;19817;19818;19819 19816 4 SFSYQLEALKSK IEFEPASKSFSYQLEA QLEALKSKYVLLNPKT K S F S K Y 1 0 0 0 0 1 1 0 0 0 2 2 0 1 0 3 0 0 1 0 0 12 1 1399.7347 Q9P275;Q9P275-2;F5H3B9 Q9P275 48 59 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 2;3 0 225.63 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 3 1 2 1 1 2 92499000 22628000 6074100 20428000 3674800 4750800 34944000 6753 1576 6851 30010;30011;30012;30013;30014;30015;30016;30017;30018;30019 19820;19821;19822;19823;19824;19825;19826;19827 19823 8 SFTCDSCGFGFSCEK RVSRRFGRSFTCDSCG GFGFSCEKLLDEHVLT R S F E K L 0 0 0 1 3 0 1 2 0 0 0 1 0 3 0 3 1 0 0 0 0 15 0 1787.6589 Q9Y2K1;Q9Y2K1-2 Q9Y2K1 215 229 ZBTB1 Zinc finger and BTB domain-containing protein 1 yes no 2 0.0027325 65.477 By matching By MS/MS By matching By matching By matching By matching 1 3592000 0 3592000 0 0 0 0 6754 1633 6852 30020 19828 19828 1 SFTSSSPSSPSR GSSTTLTKSFTSSSPS SSPSSPSRAK______ K S F S R A 0 1 0 0 0 0 0 0 0 0 0 0 0 1 2 7 1 0 0 0 0 12 0 1225.5575 H7BZX1;H7C1R7;H7BZK1;H7BXR3;E9PAS5;O94875-5;O94875-3;C9JKV9;O94875-2;G3XAI0;O94875-4;H7BXR4;E9PAW4;O94875-7;O94875 H7BZX1 240 251 SORBS2 Sorbin and SH3 domain-containing protein 2 yes no 2 0.0042781 65.241 By matching By matching By matching By matching By MS/MS By matching 1 1 478910 0 0 0 126330 352580 0 6755 257 6853 30021;30022 19829 19829 1 SFVLNLGK GEVAPDAKSFVLNLGK SFVLNLGKDSNNLCLH K S F G K D 0 0 1 0 0 0 0 1 0 0 2 1 0 1 0 1 0 0 0 1 0 8 0 876.5069 P09382 P09382 30 37 LGALS1 Galectin-1 yes yes 2 0.014193 89.296 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 261810000 0 108570000 0 20196000 0 133050000 6756 812 6854 30023;30024;30025 19830;19831;19832 19832 3 SFVSISEATDCLVDFKK DLNESPVKSFVSISEA DCLVDFKKQVTVQPGS K S F K K Q 1 0 0 2 1 0 1 0 0 1 1 2 0 2 0 3 1 0 0 2 0 17 1 1944.9503 Q96RL1;F8VQY2;Q96RL1-3;F2Z2T8;Q96RL1-2;Q96RL1-4;H7BXP9 Q96RL1 681 697 UIMC1 BRCA1-A complex subunit RAP80 yes no 3 0.025582 69.331 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 6757 535 6855 30026 19833 19833 1 SFVSSNWAETPRLGK LFNTHLQKSFVSSNWA AETPRLGKKNESSYFP K S F G K K 1 1 1 0 0 0 1 1 0 0 1 1 0 1 1 3 1 1 0 1 0 15 1 1677.8475 P54132;F5H7R6;H0YNU5 P54132 499 513 BLM Bloom syndrome protein yes no 3 0.0024695 59.68 By matching By matching By matching By MS/MS By matching By matching 1 3067900 0 0 0 3067900 0 0 6758 965 6856 30027 19834 19834 1 SFYSSHYAR MRDGFRRKSFYSSHYA FYSSHYARERSPYKRD K S F A R E 1 1 0 0 0 0 0 0 1 0 0 0 0 1 0 3 0 0 2 0 0 9 0 1116.4989 F8WF16;Q8NEY8-6;E9PAX8;F8W6A0;Q8NEY8-8;Q8NEY8-2;F8W0Q9;Q8NEY8-3;Q8NEY8;F8VPY7;F8VWU8;Q8NEY8-5 F8WF16 62 70 PPHLN1 Periphilin-1 yes no 2 0.0062481 104.01 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 3102000 468310 0 727310 618070 0 1288300 6759 401 6857 30028;30029;30030;30031 19835;19836 19835 2 SGAAHLCDSQETNCSTAGHSK TKAPQTPRSGAAHLCD CSTAGHSKTPPSGADS R S G S K T 3 0 1 1 2 1 1 2 2 0 1 1 0 0 0 4 2 0 0 0 0 21 0 2216.9175 Q9P275;Q9P275-2;E9PEW0 Q9P275 632 652 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 4 0.010422 39.276 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 2266800 0 0 249510 321530 614220 1081500 6760 1576 6858 30032;30033;30034;30035 19837;19838 19838 2 SGAAHLCDSQETNCSTAGHSKTPPSGADSK TKAPQTPRSGAAHLCD PPSGADSKTVKLKSPV R S G S K T 4 0 1 2 2 1 1 3 2 0 1 2 0 0 2 6 3 0 0 0 0 30 1 3057.3152 Q9P275;Q9P275-2;E9PEW0 Q9P275 632 661 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 4;5 5.0169E-05 47.73 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 2 1 2 15668000 2050200 3335300 4005500 929560 5347600 0 6761 1576 6859 30036;30037;30038;30039;30040;30041;30042;30043 19839;19840;19841;19842;19843 19840 2 SGAIMCENCMTTNQK TCRWREEKSGAIMCEN NCMTTNQKKALKVEHT K S G Q K K 1 0 2 0 2 1 1 1 0 1 0 1 2 0 0 1 2 0 0 0 0 15 0 1743.7048 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7;F5H7D9;H7C3H1 Q86YP4 433 447 GATAD2A Transcriptional repressor p66-alpha yes no 2 0.012256 57.288 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 43530000 674480 5634300 12395000 630300 720020 23476000 6762 170 6860;6861 30044;30045;30046;30047;30048;30049;30050 19844;19845;19846;19847;19848 19848 15 4 SGAIMCENCMTTNQKK TCRWREEKSGAIMCEN CMTTNQKKALKVEHTS K S G K K A 1 0 2 0 2 1 1 1 0 1 0 2 2 0 0 1 2 0 0 0 0 16 1 1871.7998 Q86YP4;B5MC40;Q86YP4-2;B4DKZ7;F5H7D9;H7C3H1 Q86YP4 433 448 GATAD2A Transcriptional repressor p66-alpha yes no 3 1.0175E-79 130.95 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 24064000 582760 0 8696600 0 505200 14279000 6763 170 6862 30051;30052;30053;30054 19849;19850;19851 19849 3 SGAISAIKAETK EQAKQLVKSGAISAIK SAIKAETKNSGFKRSR K S G T K N 3 0 0 0 0 0 1 1 0 2 0 2 0 0 0 2 1 0 0 0 0 12 1 1174.6558 A2ABK4;A2ABK3;E9PD43;A2ABK2;A2ABK1;B4DUN1;P18615;B4DYX9 A2ABK4 71 82 NELFE Negative elongation factor E yes no 2 1.8707E-14 108.68 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 4770500 613790 1002800 885570 584400 0 1683900 6764 8 6863 30055;30056;30057;30058;30059;30060 19852;19853;19854;19855 19854 4 SGALPQQYPASGENKSK GAPAGGEKSGALPQQY ASGENKSKDESQSLLR K S G S K D 2 0 1 0 0 2 1 2 0 0 1 2 0 0 2 3 0 0 1 0 0 17 1 1760.8693 Q9UHF7;Q9UHF7-3;Q9UHF7-2;E5RJ97;E5RFF3;H0YC29 Q9UHF7 863 879 TRPS1 Zinc finger transcription factor Trps1 yes no 3 0.016497 40.693 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 7616500 661660 1253800 2150100 703540 903110 1944400 6765 1594 6864 30061;30062;30063;30064;30065;30066 19856 19856 1 SGAQASSTPLSPTR PSQRRATRSGAQASST STPLSPTRITRLQEKE R S G T R I 2 1 0 0 0 1 0 1 0 0 1 0 0 0 2 4 2 0 0 0 0 14 0 1358.679 P02545;P02545-3;Q6UYC3;P02545-2;Q3BDU5;Q5TCJ4 P02545 12 25 LMNA Prelamin-A/C;Lamin-A/C yes no 2 5.8517E-05 91.845 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 22722000 1364100 3590100 3118100 1634200 2994500 10021000 6766 783 6865 30067;30068;30069;30070;30071;30072 19857;19858;19859;19860;19861;19862 19858 6 SGAQASSTPLSPTRITR PSQRRATRSGAQASST LSPTRITRLQEKEDLQ R S G T R L 2 2 0 0 0 1 0 1 0 1 1 0 0 0 2 4 3 0 0 0 0 17 1 1728.9119 P02545;P02545-3;Q6UYC3;P02545-2;Q3BDU5;Q5TCJ4 P02545 12 28 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.0030445 51.771 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 59604000 184180 13316000 9371600 3919700 10926000 21886000 6767 783 6866 30073;30074;30075;30076;30077;30078 19863;19864;19865;19866;19867 19863 5 SGASEANLIVAK QMICSKRRSGASEANL EANLIVAKSWADVVKL R S G A K S 3 0 1 0 0 0 1 1 0 1 1 1 0 0 0 2 0 0 0 1 0 12 0 1158.6245 P46013;F5H4V4;P46013-2;E7EN66 P46013 648 659 MKI67 Antigen KI-67 no no 2 2.8832E-50 132.86 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 113440000 19349000 14400000 22398000 13092000 14762000 29441000 6768 919;920 6867 30079;30080;30081;30082;30083;30084;30085 19868;19869;19870;19871;19872;19873;19874 19871 6 SGCIPENHGEDMRK DLVSALVRSGCIPENH NHGEDMRKMSFQRCAR R S G R K M 0 1 1 1 1 0 2 2 1 1 0 1 1 0 1 1 0 0 0 0 0 14 1 1628.7035 F5H1S9;G8JLB3;Q9Y606-2;Q9Y606;F5H168;F5GY32;F8W9U5;F5H1B2;F5GXL3 F5H1S9 70 83 PUS1 tRNA pseudouridine synthase;tRNA pseudouridine synthase A, mitochondrial yes no 3;4 0.00094143 67.019 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 14931000 1196700 2500900 3235000 1318800 2479200 4200200 6769 511 6868 30086;30087;30088;30089;30090;30091;30092;30093;30094;30095;30096;30097 19875;19876;19877;19878;19879;19880 19877 6 SGDETPGSEVPGDK EEDEPEERSGDETPGS GSEVPGDKAAEEQGDD R S G D K A 0 0 0 2 0 0 2 3 0 0 0 1 0 0 2 2 1 0 0 1 0 14 0 1373.5947 H3BQZ7;Q1KMD3 H3BQZ7 161 174 hCG_2044799;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 2 0.0014308 81.789 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 8934300 680870 1973100 1623800 482530 1047200 3126800 6770 640 6869 30098;30099;30100;30101;30102;30103 19881;19882;19883 19881 3 SGDFQGADRPGPEEK RRREQQGRSGDFQGAD DRPGPEEKREEGDTEP R S G E K R 1 1 0 2 0 1 2 3 0 0 0 1 0 1 2 1 0 0 0 0 0 15 1 1588.7118 F5H1N7;Q6ZU35;F5H2I6 F5H1N7 461 475 KIAA1211 Uncharacterized protein KIAA1211 yes no 3 0.0025123 62.287 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3258500 0 572560 1444800 0 0 1241200 6771 510 6870 30104;30105;30106 19884;19885 19884 2 SGDGANAGGLVAAIAPKGSEK SKKEVQGRSGDGANAG IAPKGSEKAAKASRSV R S G E K A 5 0 1 1 0 0 1 5 0 1 1 2 0 0 1 2 0 0 0 1 0 21 1 1868.9592 O15014 O15014 125 145 ZNF609 Zinc finger protein 609 yes yes 3 0.0030636 47.499 By matching By MS/MS By matching By matching By matching By matching 1 1 10602000 0 10106000 0 496700 0 0 6772 701 6871 30107;30108 19886 19886 1 SGDGATEQAAEYVPEKVK ________________ EYVPEKVKKAEKKLEE M S G V K K 3 0 0 1 0 1 3 2 0 0 0 2 0 0 1 1 1 0 1 2 0 18 1 1877.9007 Q12996;E9PB40;E9PJ06;Q12996-2 Q12996 2 19 CSTF3 Cleavage stimulation factor subunit 3 yes no 2 0.0076156 52.644 By matching By matching By MS/MS By matching By matching By matching 1 0 0 0 0 0 0 0 6773 1067 6872 30109 19887 19887 1 SGDGEGTPVEHVR TILDKYLKSGDGEGTP GTPVEHVRCFQPPIHQ K S G V R C 0 1 0 1 0 0 2 3 1 0 0 0 0 0 1 1 1 0 0 2 0 13 0 1338.6164 Q7L576;E7EQ04;Q7L576-3;Q7L576-2 Q7L576 1228 1240 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes no 2 0.016884 50.467 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1472300 0 318970 0 0 474020 679290 6774 359 6873 30110;30111;30112 19888 19888 1 SGDICNACVLLVK CFGLHETRSGDICNAC NACVLLVKRWKKLPAG R S G V K R 1 0 1 1 2 0 0 1 0 1 2 1 0 0 0 1 0 0 0 2 0 13 0 1447.7163 F5H6U2;F5GZ82;Q9NP50;B7Z287 F5H6U2 49 61 FAM60A Protein FAM60A yes no 2 0.015427 51.359 By matching By matching By matching By MS/MS By matching By matching 1 4584700 0 0 0 4584700 0 0 6775 183 6874 30113 19889 19889 1 SGDQNWVSVSR CLASSVMRSGDQNWVS QNWVSVSRAIKPFAEP R S G S R A 0 1 1 1 0 1 0 1 0 0 0 0 0 0 0 3 0 1 0 2 0 11 0 1233.5738 H7C128;H7C179;Q9H0E9-4;B5MCW3;H7C127;Q9H0E9-2;Q9H0E9;F8WBH2 H7C128 28 38 BRD8 Bromodomain-containing protein 8 yes no 2 0.0040645 78.964 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 13160000 2003200 1511400 1980900 0 3559500 4105300 6776 171 6875 30114;30115;30116;30117;30118 19890;19891;19892;19893 19892 4 SGEEDEEILFKER SLPEVEVKSGEEDEEI EEILFKERAKLYRWDR K S G E R A 0 1 0 1 0 0 5 1 0 1 1 1 0 1 0 1 0 0 0 0 0 13 1 1579.7366 P49792;E9PGT0 P49792 2925 2937 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 2;3 0.0045118 62.162 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 1 2 23459000 2697000 5999300 2554700 872870 5325800 6009600 6777 945 6876 30119;30120;30121;30122;30123;30124;30125;30126 19894;19895;19896;19897 19896 4 SGEGIREPISVK WTGGGLGKSGEGIREP IREPISVKEQHKREGL K S G V K E 0 1 0 0 0 0 2 2 0 2 0 1 0 0 1 2 0 0 0 1 0 12 1 1270.6881 O15226;G3V1N1 O15226 572 583 NKRF NF-kappa-B-repressing factor yes no 3 0.023874 50.46 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 6120400 339520 1262000 0 951790 2107400 1459700 6778 578 6877 30127;30128;30129;30130;30131 19898 19898 1 SGEGIREPISVKEQHK WTGGGLGKSGEGIREP ISVKEQHKREGLGLDV K S G H K R 0 1 0 0 0 1 3 2 1 2 0 2 0 0 1 2 0 0 0 1 0 16 2 1792.9432 O15226;G3V1N1 O15226 572 587 NKRF NF-kappa-B-repressing factor yes no 3;4 0.00031317 87.363 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 2 2 2 74097000 2658100 6917100 12703000 13001000 23519000 15298000 6779 578 6878 30132;30133;30134;30135;30136;30137;30138;30139;30140;30141;30142 19899;19900;19901;19902;19903;19904;19905;19906 19904 8 SGELNGDQVSLGTKK MATVQKQKSGELNGDQ QVSLGTKKKKKAKKAS K S G K K K 0 0 1 1 0 1 1 3 0 0 2 2 0 0 0 2 1 0 0 1 0 15 1 1531.7842 E7ENF1;G5EA44;Q96C57;F5H7W8;F5H8B7;H0YGK4;F6TFQ5 E7ENF1 193 207 C12orf43 Uncharacterized protein C12orf43 yes no 3 0.0023529 53.946 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 7016100 683990 1179800 801640 913150 2357200 1080400 6780 350 6879 30143;30144;30145;30146;30147;30148 19907;19908 19908 2 SGFEGMFTK SETSKAPKSGFEGMFT GFEGMFTKKEGQWDCS K S G T K K 0 0 0 0 0 0 1 2 0 0 0 1 1 2 0 1 1 0 0 0 0 9 0 1002.4481 P49792 P49792 1597 1605 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 2 2.721E-41 137.05 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 226340000 110260000 38561000 27656000 33138000 16726000 0 6781 945 6880 30149;30150;30151;30152;30153 19909;19910;19911;19912;19913 19910 5 SGFKGFDTSSSSSNSAASSSFK ESAKPGTKSGFKGFDT SAASSSFKFGVSSSSS K S G F K F 2 0 1 1 0 0 0 2 0 0 0 2 0 3 0 10 1 0 0 0 0 22 1 2171.9607 P49790;F6QR24;Q4LE47 P49790 883 904 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 3 1.0453E-06 65.833 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 32985000 6871200 4163500 3855300 4339200 6965600 6790100 6782 531 6881 30154;30155;30156;30157;30158;30159 19914;19915;19916;19917;19918 19915 5 SGFLPCRKPVEK ICYRVKLKSGFLPCRK PCRKPVEKEILSNING K S G E K E 0 1 0 0 1 0 1 1 0 0 1 2 0 1 2 1 0 0 0 1 0 12 2 1416.7548 Q9UNQ0-2;Q9UNQ0;H0YAF3;H0YAF1 Q9UNQ0-2 50 61 ABCG2 ATP-binding cassette sub-family G member 2 yes no 3 0.032965 63.32 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 7210700 0 862300 1390900 878730 2211100 1867700 6783 1616 6882 30160;30161;30162;30163;30164 19919;19920 19919 1 SGFSSISVSR ARLPGVSRSGFSSISV FSSISVSRSRGSGGLG R S G S R S 0 1 0 0 0 0 0 1 0 1 0 0 0 1 0 5 0 0 0 1 0 10 0 1025.5142 P04259;CON__P04259;F5H6G5 P04259 31 40 KRT6B Keratin, type II cytoskeletal 6B no no 2 1.4486E-15 123.51 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 66004000 9646400 11587000 4277700 16860000 11574000 12059000 + 6784 788 6883 30165;30166;30167;30168;30169;30170 19921;19922;19923;19924;19925 19921 5 SGFSSPSPSQTSSLGTAFTQHHRPVITGPR TTLKKSEKSGFSSPSP RPVITGPRASPHATPS K S G P R A 1 2 0 0 0 2 0 3 2 1 1 0 0 2 4 7 4 0 0 1 0 30 1 3123.5486 Q12857-2;B1AKN5;F5H0R0;Q12857;B1AKN8;F8W8W3;B1AKN6 Q12857-2 329 358 NFIA Nuclear factor 1 A-type yes no 4;5 2.31E-21 77.062 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 70133000 0 0 33404000 9331700 8960600 18436000 6785 1062 6884 30171;30172;30173;30174 19926;19927;19928 19927 3 SGFSSVSVSR ARLPGVSRSGFSSVSV FSSVSVSRSRGSGGLG R S G S R S 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 5 0 0 0 2 0 10 0 1011.4985 P02538;CON__P02538 P02538 31 40 KRT6A Keratin, type II cytoskeletal 6A yes no 2 0.0025538 101.3 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 96889000 7609000 7751400 7018500 40021000 23692000 10797000 + 6786 287 6885 30175;30176;30177;30178;30179;30180 19929;19930;19931;19932 19931 4 SGFSSVSVSRSRGSGGLGGACGGAGFGSR ARLPGVSRSGFSSVSV GGAGFGSRSLYGLGGS R S G S R S 2 3 0 0 1 0 0 10 0 0 1 0 0 2 0 8 0 0 0 2 0 29 2 2660.2474 P02538;CON__P02538 P02538 31 59 KRT6A Keratin, type II cytoskeletal 6A yes no 4 0.00027884 40.718 By matching By matching By matching By MS/MS By matching By matching 1 5604400 0 0 0 5604400 0 0 + 6787 287 6886 30181 19933 19933 1 SGGASHSELIHNLRK VCLAMAWKSGGASHSE ELIHNLRKNGIIKTDK K S G R K N 1 1 1 0 0 0 1 2 2 1 2 1 0 0 0 3 0 0 0 0 0 15 1 1604.8383 F8WDT3;F8WAV5;F8WAX2;P22061;P22061-2;H7BY58 F8WDT3 63 77 PCMT1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase;Protein-L-isoaspartate O-methyltransferase yes no 3;4 0.0002634 71.933 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 110330000 0 6624900 19868000 34281000 33055000 16505000 6788 566 6887 30182;30183;30184;30185;30186;30187;30188;30189;30190 19934;19935;19936;19937;19938;19939;19940;19941 19937 7 SGGDLTLHYRQK TVKHFIWKSGGDLTLH LTLHYRQKST______ K S G Q K S 0 1 0 1 0 1 0 2 1 0 2 1 0 0 0 1 1 0 1 0 0 12 1 1373.7052 Q8TAF3-2;C9JQ19;Q8TAF3-5;Q8TAF3-4;Q8TAF3-3;Q8TAF3 Q8TAF3-2 108 119 WDR48 WD repeat-containing protein 48 yes no 3 0.0033954 70.728 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 4362800 0 755430 691850 475850 935080 1504500 6789 264 6888 30191;30192;30193;30194;30195 19942;19943;19944 19942 3 SGGGFGPDPGSGTTVPAR PPPKPRLKSGGGFGPD SGTTVPARRLPVPRPS K S G A R R 1 1 0 1 0 0 0 6 0 0 0 0 0 1 3 2 2 0 0 1 0 18 0 1615.759 Q9H4L4 Q9H4L4 44 61 SENP3 Sentrin-specific protease 3 yes yes 2 0.003524 49.537 By matching By matching By matching By matching By MS/MS By matching 1 1 1 3600500 0 952390 0 0 510860 2137200 6790 1489 6889 30196;30197;30198 19945 19945 1 SGGGFSSGSAGIINYQR FSSRSGYRSGGGFSSG AGIINYQRRTTSSSTR R S G Q R R 1 1 1 0 0 1 0 5 0 2 0 0 0 1 0 4 0 0 1 0 0 17 0 1656.7856 P04264;CON__P04264 P04264 13 29 KRT1 Keratin, type II cytoskeletal 1 yes no 2 5.9056E-271 173.19 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 21076000 10251000 1260400 0 0 6739800 2824000 + 6791 789 6890 30199;30200;30201;30202 19946;19947;19948 19948 3 SGGGFSSGSAGIINYQRR FSSRSGYRSGGGFSSG GIINYQRRTTSSSTRR R S G R R T 1 2 1 0 0 1 0 5 0 2 0 0 0 1 0 4 0 0 1 0 0 18 1 1812.8867 P04264;CON__P04264 P04264 13 30 KRT1 Keratin, type II cytoskeletal 1 yes no 3 0.00029338 74.296 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 2 1 50161000 5927300 3712700 2393900 4773300 26030000 7324200 + 6792 789 6891 30203;30204;30205;30206;30207;30208;30209 19949;19950;19951;19952;19953;19954 19950 6 SGGGGGGGFGRVSLAGACGVGGYGSR TSFTSVSRSGGGGGGG GVGGYGSRSLYNLGGS R S G S R S 2 2 0 0 1 0 0 13 0 0 1 0 0 1 0 3 0 0 1 2 0 26 1 2256.0454 P13647;CON__P13647;F8VV57 P13647 38 63 KRT5 Keratin, type II cytoskeletal 5 yes no 3 1.3182E-162 138.24 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 186430000 22825000 42841000 22416000 75364000 3222700 19762000 + 6793 299 6892 30210;30211;30212;30213;30214;30215 19955;19956;19957;19958;19959;19960;19961 19959 7 SGGGGGGGFGRVSLAGACGVGGYGSRSLYNLGGSK TSFTSVSRSGGGGGGG LYNLGGSKRISISTSG R S G S K R 2 2 1 0 1 0 0 15 0 0 3 1 0 1 0 5 0 0 2 2 0 35 2 3175.5217 P13647;CON__P13647;F8VV57 P13647 38 72 KRT5 Keratin, type II cytoskeletal 5 yes no 4 6.0259E-08 37.93 By matching By matching By matching By MS/MS By matching By matching 1 24251000 0 0 0 24251000 0 0 + 6794 299 6893 30216 19962 19962 1 SGGGGGGGGCGGGGGVSSLR SKHYSSSRSGGGGGGG GGGVSSLRISSSKGSL R S G L R I 0 1 0 0 1 0 0 13 0 0 1 0 0 0 0 3 0 0 0 1 0 20 0 1548.6699 P13645;CON__P13645 P13645 16 35 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.00010668 70.02 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 29771000 3171000 3205900 9730100 3215200 2951100 7497800 + 6795 298 6894 30217;30218;30219;30220;30221;30222 19963;19964;19965;19966;19967;19968 19966 6 SGGGGGGGGCGGGGGVSSLRISSSK SKHYSSSRSGGGGGGG SLRISSSKGSLGGGFS R S G S K G 0 1 0 0 1 0 0 13 0 1 1 1 0 0 0 6 0 0 0 1 0 25 1 2050.945 P13645;CON__P13645 P13645 16 40 KRT10 Keratin, type I cytoskeletal 10 yes no 3 4.9951E-16 81.696 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 37975000 4311600 2550600 11631000 11007000 3223500 5251600 + 6796 298 6895 30223;30224;30225;30226;30227;30228 19969;19970;19971;19972;19973 19970 5 SGGGGGGGLGSGGSIR FSSSYLSRSGGGGGGG LGSGGSIRSSYSRFSS R S G I R S 0 1 0 0 0 0 0 10 0 1 1 0 0 0 0 3 0 0 0 0 0 16 0 1231.5905 P35527;CON__P35527 P35527 14 29 KRT9 Keratin, type I cytoskeletal 9 yes no 2 2.0271E-37 114.63 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 73459000 6832000 12880000 24264000 7078700 14655000 7749400 + 6797 899 6896 30229;30230;30231;30232;30233;30234 19974;19975;19976;19977;19978;19979;19980 19976 7 SGGGGGGGLGSGGSIRSSYSR FSSSYLSRSGGGGGGG SIRSSYSRFSSSGGGG R S G S R F 0 2 0 0 0 0 0 10 0 1 1 0 0 0 0 6 0 0 1 0 0 21 1 1811.8511 P35527;CON__P35527 P35527 14 34 KRT9 Keratin, type I cytoskeletal 9 yes no 3 9.8662E-33 101.3 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 2 1 60854000 6317000 7201200 10190000 15415000 14719000 7012400 + 6798 899 6897 30235;30236;30237;30238;30239;30240;30241;30242 19981;19982;19983;19984;19985;19986 19983 6 SGGGGGRFSSCGGGGGSFGAGGGFGSR TTSSSTRRSGGGGGRF AGGGFGSRSLVNLGGS R S G S R S 1 2 0 0 1 0 0 15 0 0 0 0 0 3 0 5 0 0 0 0 0 27 1 2292.9679 P04264;CON__P04264 P04264 39 65 KRT1 Keratin, type II cytoskeletal 1 yes no 3 3.689E-98 124.39 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 11 8 11 11 13 7 311760000 27827000 32538000 80669000 59689000 60013000 51027000 + 6799 789 6898 30243;30244;30245;30246;30247;30248;30249;30250;30251;30252;30253;30254;30255;30256;30257;30258;30259;30260;30261;30262;30263;30264;30265;30266;30267;30268;30269;30270;30271;30272;30273;30274;30275;30276;30277;30278;30279;30280;30281;30282;30283;30284;30285;30286;30287;30288;30289;30290;30291;30292;30293;30294;30295;30296;30297;30298;30299;30300;30301;30302;30303 19987;19988;19989;19990;19991;19992;19993;19994;19995;19996;19997;19998;19999;20000;20001;20002;20003;20004;20005;20006;20007;20008;20009;20010;20011;20012;20013;20014;20015;20016;20017;20018;20019;20020 19988 31 SGGGGGRFSSCGGGGGSFGAGGGFGSRSLVNLGGSK TTSSSTRRSGGGGGRF LVNLGGSKSISISVAR R S G S K S 1 2 1 0 1 0 0 17 0 0 2 1 0 3 0 7 0 0 0 1 0 36 2 3148.4493 P04264;CON__P04264 P04264 39 74 KRT1 Keratin, type II cytoskeletal 1 yes no 3;4 2.9033E-144 123.51 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1 209360000 0 9535600 58386000 108990000 7717600 24724000 + 6800 789 6899 30304;30305;30306;30307;30308;30309 20021;20022;20023;20024;20025 20021 5 SGGGSCGGGGSYSASSSSSAAAAAGAAVLPVKKPK AATASGGKSGGGSCGG VLPVKKPKMEHVQADH K S G P K M 8 0 0 0 1 0 0 8 0 0 1 3 0 0 2 9 0 0 1 2 0 35 2 3038.4727 Q15022 Q15022 41 75 SUZ12 Polycomb protein SUZ12 yes yes 4 3.1541E-17 55.984 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 24802000 9790100 1590600 5772700 3245000 1472700 2931300 6801 1126 6900 30310;30311;30312;30313;30314;30315 20026;20027;20028;20029;20030 20030 5 SGGGSVGAVVVKQEPLEEDSPSSSSAGLDK APGLQPMRSGGGSVGA SSSAGLDKA_______ R S G D K A 2 0 0 2 0 1 3 5 0 0 2 2 0 0 2 7 0 0 0 4 0 30 1 2872.3938 C9JCN8;P15408-3;P15408;P15408-2 C9JCN8 172 201 FOSL2 Fos-related antigen 2 yes no 3 6.6425E-13 60.797 By MS/MS By matching By matching By matching By matching By matching 1 3902800 3902800 0 0 0 0 0 6802 240 6901 30316 20031 20031 1 SGGLQTPECLSR HPGLMSPRSGGLQTPE QTPECLSREGSPIPHD R S G S R E 0 1 0 0 1 1 1 2 0 0 2 0 0 0 1 2 1 0 0 0 0 12 0 1303.619 P85037;P85037-2;F5H8G8 P85037 431 442 FOXK1 Forkhead box protein K1 yes no 2 0.03709 45.357 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 7930300 0 2133300 1321200 434750 867900 3173200 6803 1017 6902 30317;30318;30319;30320;30321 20032;20033 20032 2 SGGNEVSIEER EQVESKRKSGGNEVSI NEVSIEERLGAMDIDT K S G E R L 0 1 1 0 0 0 3 2 0 1 0 0 0 0 0 2 0 0 0 1 0 11 0 1175.5418 Q15061 Q15061 431 441 WDR43 WD repeat-containing protein 43 yes yes 2 0.010058 64.827 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5698700 1071300 1281400 0 758190 0 2587900 6804 1130 6903 30322;30323;30324;30325 20034 20034 1 SGGSGHAVAEPASPEQELDQNKGK VSRKSRPKSGGSGHAV ELDQNKGKGRDVESVQ K S G G K G 3 0 1 1 0 2 3 4 1 0 1 2 0 0 2 3 0 0 0 1 0 24 1 2392.1255 P46013;F5H4V4 P46013 296 319 MKI67 Antigen KI-67 yes no 4 3.0017E-07 61.985 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 6080400 0 1959500 0 0 1188800 2932100 6805 919 6904 30326;30327;30328 20035;20036 20035 1 SGGSRSFSTASAITPSVSR RQSSVSFRSGGSRSFS AITPSVSRTSFTSVSR R S G S R T 2 2 0 0 0 0 0 2 0 1 0 0 0 1 1 7 2 0 0 1 0 19 1 1853.9232 P13647;CON__P13647;F8VV57;E7EU87;F8VU69 P13647 11 29 KRT5 Keratin, type II cytoskeletal 5 yes no 3 0.00034487 69.07 By matching By matching By matching By MS/MS By matching By matching 1 1 1 9390000 929760 0 1311800 7148500 0 0 + 6806 299 6905 30329;30330;30331 20037 20037 1 SGGSRSFSTASAITPSVSRTSFTSVSR RQSSVSFRSGGSRSFS TSFTSVSRSGGGGGGG R S G S R S 2 3 0 0 0 0 0 2 0 1 0 0 0 2 1 10 4 0 0 2 0 27 2 2719.3525 P13647;CON__P13647;F8VV57;E7EU87;F8VU69 P13647 11 37 KRT5 Keratin, type II cytoskeletal 5 yes no 4 2.0926E-13 70.767 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 33326000 0 3229600 0 30096000 0 0 + 6807 299 6906 30332;30333 20038;20039 20038 2 SGGTEGLLAEK ________________ TEGLLAEKLEALITQT R S G E K L 1 0 0 0 0 0 2 3 0 0 2 1 0 0 0 1 1 0 0 0 0 11 0 1060.5401 Q96K98;F5H5Y3;G3V1U4;Q9UHB9;F5H281 Q96K98 7 17 SRP68 Signal recognition particle subunit SRP68 yes no 2 0.017377 57.567 By matching By matching By matching By matching By matching By MS/MS 1 1 1720800 0 0 0 0 634320 1086500 6808 521 6907 30334;30335 20040 20040 1 SGGTPYIGSK ________________ GTPYIGSKISLISKAE M S G S K I 0 0 0 0 0 0 0 3 0 1 0 1 0 0 1 2 1 0 1 0 0 10 0 965.48181 B4DTG6;Q8ND56-2;Q8ND56;I3L4Q1 B4DTG6 2 11 LSM14A Protein LSM14 homolog A yes no 2 0.01325 59.265 By matching By MS/MS By matching By matching By matching By matching 1 971060 0 971060 0 0 0 0 6809 128 6908 30336 20041 20041 1 SGGVIKPPAMSSR DFFKLDPRSGGVIKPP KPPAMSSRGLFKNLGI R S G S R G 1 1 0 0 0 0 0 2 0 1 0 1 1 0 2 3 0 0 0 1 0 13 1 1285.6813 Q9H5Q4 Q9H5Q4 158 170 TFB2M Dimethyladenosine transferase 2, mitochondrial yes yes 3 0.0022754 69.846 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3457200 230190 190220 0 0 467620 2569100 6810 1493 6909 30337;30338;30339;30340 20042 20042 1 SGHSSVEDAQATMELYK NRDIQVGKSGHSSVED QATMELYKLVEVEWEE K S G Y K L 2 0 0 1 0 1 2 1 1 0 1 1 1 0 0 3 1 0 1 1 0 17 0 1851.8309 Q9H9L3 Q9H9L3 320 336 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 yes yes 2;3 8.8812E-08 91.616 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 3 2 2 74301000 17035000 10804000 21883000 7353800 5080800 12144000 6811 1509 6910 30341;30342;30343;30344;30345;30346;30347;30348;30349;30350;30351;30352 20043;20044;20045;20046;20047;20048;20049;20050;20051;20052 20051 10 SGIQPLCPER ENICGREKSGIQPLCP IQPLCPERSHISDQSP K S G E R S 0 1 0 0 1 1 1 1 0 1 1 0 0 0 2 1 0 0 0 0 0 10 0 1155.5706 P42166 P42166 335 344 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 0.015827 67.214 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 84482000 5615300 10377000 9768900 4957800 20581000 33182000 6812 913 6911 30353;30354;30355;30356;30357;30358 20053;20054;20055;20056 20054 4 SGIQPLCPERSHISDQSPLSSK ENICGREKSGIQPLCP DQSPLSSKRKALEESE K S G S K R 0 1 0 1 1 2 1 1 1 2 2 1 0 0 3 6 0 0 0 0 0 22 1 2422.1911 P42166 P42166 335 356 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 3;4 0.0030122 48.146 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 2 1 2 713100000 163300000 1347100 297300000 36553000 214600000 0 6813 913 6912 30359;30360;30361;30362;30363;30364;30365 20057;20058;20059;20060;20061 20058 5 SGKAPILIATDVASR DWVLNEFRSGKAPILI IATDVASRGLDVEDVK R S G S R G 3 1 0 1 0 0 0 1 0 2 1 1 0 0 1 2 1 0 0 1 0 15 1 1497.8515 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 387 401 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 3 8.69E-56 127.05 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 114430000 15307000 11529000 14159000 2146600 8202000 63084000 6814 1361;629 6913 30366;30367;30368;30369;30370;30371 20062;20063;20064;20065 20065 4 SGKLKGDDLQAIK SGQRGSSKSGKLKGDD GDDLQAIKKELTQIKQ K S G I K K 1 0 0 2 0 1 0 2 0 1 2 3 0 0 0 1 0 0 0 0 0 13 2 1371.7722 G3V576;G3V4W0;B4DY08;G3V4C1;P07910-2;B2R603;G3V2Q1;P07910;P07910-3;G3V5V7;G8JL89;G3V2D6;O60812 G3V576 185 197 HNRNPC;HNRNPCL1 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 1 yes no 3 3.0157E-157 166.7 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 38725000 10679000 7302300 6271900 3711800 6286500 4473200 6815 68 6914 30372;30373;30374;30375;30376;30377 20066;20067;20068;20069;20070 20068 5 SGKSPILVATAVAAR EEALHQFRSGKSPILV VATAVAARGLDISNVK R S G A R G 4 1 0 0 0 0 0 1 0 1 1 1 0 0 1 2 1 0 0 2 0 15 1 1439.846 O00571;O00571-2;B4DXX7;O15523;B4E132 O00571 489 503 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 3 1.2757E-08 98.676 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 19479000 2928600 0 2482700 0 2236400 11832000 6816 693 6915 30378;30379;30380;30381 20071;20072;20073;20074 20074 4 SGKYVLGYKQTLK SRLQLVMKSGKYVLGY LGYKQTLKMIRQGKAK K S G L K M 0 0 0 0 0 1 0 2 0 0 2 3 0 0 0 1 1 0 2 1 0 13 2 1483.8399 E5RI99;P62888;E5RJH3 E5RI99 24 36 RPL30 60S ribosomal protein L30 yes no 3 5.1584E-34 121.13 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 222190000 143020000 6325400 7532800 40335000 17736000 7241200 6817 342 6916 30382;30383;30384;30385;30386;30387 20075;20076;20077 20075 3 SGLIPIRNVTEAK FVDIGVGKSGLIPIRN IRNVTEAKLSKTKKRR K S G A K L 1 1 1 0 0 0 1 1 0 2 1 1 0 0 1 1 1 0 0 1 0 13 1 1396.8038 Q8N5C6;Q8N5C6-2;B7Z6X7 Q8N5C6 943 955 SRBD1 S1 RNA-binding domain-containing protein 1 yes no 2;3 7.9203E-47 130.19 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 1 2 1 2 1 88353000 31599000 3199100 32188000 3237700 11111000 7019300 6818 1302 6917 30388;30389;30390;30391;30392;30393;30394;30395;30396 20078;20079;20080;20081;20082;20083;20084 20084 7 SGLKKPVVASSLK AVSSNLRKSGLKKPVV PVVASSLKRQACGQLL K S G L K R 1 0 0 0 0 0 0 1 0 0 2 3 0 0 1 3 0 0 0 2 0 13 2 1312.8078 Q9NWW7 Q9NWW7 332 344 C2orf42 Uncharacterized protein C2orf42 yes yes 3 0.020044 59.294 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 6177800 0 568450 951730 682550 2659300 1315800 6819 1557 6918 30397;30398;30399;30400;30401 20085 20085 1 SGLPVGPENGVELSK SKPVPAEKSGLPVGPE ENGVELSKEELIRRKR K S G S K E 0 0 1 0 0 0 2 3 0 0 2 1 0 0 2 2 0 0 0 2 0 15 0 1481.7726 E9PJS4;P08240 E9PJS4 164 178 SRPR Signal recognition particle receptor subunit alpha yes no 2 1.1142E-13 104.94 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 43052000 14232000 12804000 0 16016000 0 0 6820 449 6919 30402;30403;30404 20086;20087 20086 2 SGLQTDYATEK NVLQYCRKSGLQTDYA QTDYATEKESADGLQG K S G E K E 1 0 0 1 0 1 1 1 0 0 1 1 0 0 0 1 2 0 1 0 0 11 0 1211.567 P46013;F5H4V4 P46013 264 274 MKI67 Antigen KI-67 yes no 2 2.4156E-06 106.79 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 106490000 8581300 26135000 17273000 6591400 16699000 31208000 6821 919 6920 30405;30406;30407;30408;30409;30410 20088;20089;20090;20091;20092;20093 20090 6 SGMVQTEAQYR IQMVRSQRSGMVQTEA VQTEAQYRFIYMAVQH R S G Y R F 1 1 0 0 0 2 1 1 0 0 0 0 1 0 0 1 1 0 1 1 0 11 0 1268.5819 Q06124;Q06124-2 Q06124 506 516 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes no 2 0.0169 57.885 By matching By matching By matching By matching By matching By MS/MS 1 1 1093700 170020 0 0 0 0 923720 6822 1040 6921 30411;30412 20094 20094 1 SGNFGGSRNMGGPYGGGNYGPGGSGGSGGYGGR PSNYGPMKSGNFGGSR GSGGYGGRSRY_____ K S G G R S 0 2 3 0 0 0 0 17 0 0 0 0 1 1 2 4 0 0 3 0 0 33 1 2951.239 P22626;P22626-2 P22626 318 350 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 3 0.001082 30.915 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 15388000 0 3361000 3323600 3323300 1166900 4213600 6823 863 6922 30413;30414;30415;30416;30417 20095 20095 1 SGNIVAGIANESK DGFKVVARSGNIVAGI AGIANESKKLYGAQFH R S G S K K 2 0 2 0 0 0 1 2 0 2 0 1 0 0 0 2 0 0 0 1 0 13 0 1258.6517 F8W720;B4DUT7;P49915 F8W720 71 83 GMPS GMP synthase [glutamine-hydrolyzing] yes no 2 2.4624E-05 97.223 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 57095000 8786600 10675000 8837700 4070900 8299100 16425000 6824 129 6923 30418;30419;30420;30421;30422;30423 20096;20097;20098 20097 3 SGNIVAGIANESKK DGFKVVARSGNIVAGI GIANESKKLYGAQFHP R S G K K L 2 0 2 0 0 0 1 2 0 2 0 2 0 0 0 2 0 0 0 1 0 14 1 1386.7467 F8W720;B4DUT7;P49915 F8W720 71 84 GMPS GMP synthase [glutamine-hydrolyzing] yes no 2;3 0.0015858 80.387 By matching By MS/MS By matching By matching By MS/MS By MS/MS 2 2 2 2 2 2 36689000 1976500 4509300 4447500 3230200 9467000 13058000 6825 129 6924 30424;30425;30426;30427;30428;30429;30430;30431;30432;30433;30434;30435 20099;20100;20101;20102 20099 4 SGNTGELRSVIHSHIK TCFELAPKSGNTGELR SVIHSHIKVIKTRKNK K S G I K V 0 1 1 0 0 0 1 2 2 2 1 1 0 0 0 3 1 0 0 1 0 16 1 1733.9173 Q16666-3;Q16666-2;Q16666;H3BLV7;E7EPR3 Q16666-3 632 647 IFI16 Gamma-interferon-inducible protein 16 yes no 4 0.020034 41.014 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 18094000 0 0 2001200 3306800 6618900 6167200 6826 1155 6925 30436;30437;30438;30439 20103 20103 1 SGPTDDGEEEMEEDTVTNGS QIPGRERRSGPTDDGE EDTVTNGS________ R S G G S - 0 0 1 3 0 0 5 3 0 0 0 0 1 0 1 2 3 0 0 1 0 20 0 2097.7804 P09661 P09661 236 255 SNRPA1 U2 small nuclear ribonucleoprotein A yes yes 2 0.0066229 43.946 By matching By MS/MS By matching By matching By matching By matching 1 9248700 0 9248700 0 0 0 0 6827 814 6926 30440 20104 20104 1 SGPTWLPPKQPEPARAPQGR ________________ PARAPQGRAIPRGTPG M S G G R A 2 2 0 0 0 2 1 2 0 0 1 1 0 0 6 1 1 1 0 0 0 20 2 2169.1443 Q15654;F2ZC08;F2ZC07 Q15654 2 21 TRIP6 Thyroid receptor-interacting protein 6 yes no 3 0.010422 42.044 By matching By matching By matching By matching By matching By MS/MS 1 2 4040300 0 570660 0 0 0 3469600 6828 1145 6927 30441;30442;30443 20105;20106 20105 0 SGQSFRSLGKAPASLPTEEK QLPALAAKSGQSFRSL ASLPTEEKKLVTTEQS K S G E K K 2 1 0 0 0 1 2 2 0 0 2 2 0 1 2 4 1 0 0 0 0 20 2 2089.0804 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 2327 2346 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 4 0.021878 35.436 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 5251200 1389900 1196700 2151400 0 513220 0 6829 1404 6928 30444;30445;30446;30447 20107 20107 1 SGQVYSFGCNDEGALGRDTSVEGSEMVPGK MHTVCLSKSGQVYSFG GSEMVPGKVELQEKVV K S G G K V 1 1 1 2 1 1 3 6 0 0 1 1 1 1 1 4 1 0 1 3 0 30 1 3132.3764 C9JW69;P18754;P18754-2;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4;H7C497 C9JW69 102 131 RCC1 Regulator of chromosome condensation yes no 3 5.5775E-08 55.26 By matching By MS/MS By matching By matching By matching By matching 1 11291000 0 11291000 0 0 0 0 6830 271 6929 30448 20108 20108 1 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK MHTVCLSKSGQVYSFG GKVELQEKVVQVSAGD K S G E K V 1 1 1 2 1 2 5 6 0 0 2 2 1 1 1 4 1 0 1 4 0 36 2 3858.7676 C9JW69;P18754;P18754-2;C9JRH2;C9JMJ4;C9J3R0;C9JQZ4;H7C497 C9JW69 102 137 RCC1 Regulator of chromosome condensation yes no 4 8.6345E-18 57.325 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 33906000 0 8878200 0 25028000 0 0 6831 271 6930 30449;30450 20109;20110;20111 20109 3 SGRFGGNPGGFGNQGGFGNSR NSNRQLERSGRFGGNP QGGFGNSRGGGAGLGN R S G S R G 0 2 3 0 0 1 0 9 0 0 0 0 0 3 1 2 0 0 0 0 0 21 1 2025.9154 Q13148;Q13148-2;B4DJ45 Q13148 273 293 TARDBP TAR DNA-binding protein 43 yes no 3 3.2487E-15 93.551 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 42337000 3557800 7480000 9944600 3740000 1665900 15949000 6832 1073 6931 30451;30452;30453;30454;30455;30456 20112;20113;20114;20115;20116;20117;20118 20113 7 SGRLWSK ________________ MSGRLWSKAIFAGYKR M S G S K A 0 1 0 0 0 0 0 1 0 0 1 1 0 0 0 2 0 1 0 0 0 7 1 832.45554 F8WBS5;F8WB72;C9K025;P18077 F8WBS5 2 8 RPL35A 60S ribosomal protein L35a yes no 2 0.0088304 96.492 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 4269400 906800 804620 0 701560 1856400 0 6833 277 6932 30457;30458;30459;30460 20119;20120 20119 2 SGSALLQSQSSTEDPK DLNKTRLRSGSALLQS QSSTEDPKDEPAELKP R S G P K D 1 0 0 1 0 2 1 1 0 0 2 1 0 0 1 5 1 0 0 0 0 16 0 1633.7795 Q5VTR2 Q5VTR2 515 530 RNF20 E3 ubiquitin-protein ligase BRE1A yes yes 2 0.029533 38.889 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2498200 0 550400 594740 0 0 1353100 6834 1204 6933 30461;30462;30463 20121 20121 1 SGSMDPSGAHPSVR RMSRSSGRSGSMDPSG SGAHPSVRQTPSRQPP R S G V R Q 1 1 0 1 0 0 0 2 1 0 0 0 1 0 2 4 0 0 0 1 0 14 0 1383.6201 Q07666;Q07666-3;Q07666-2;E7ET98 Q07666 18 31 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 2;3 9.2204E-70 133.88 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 1 2 77848000 2382400 7506200 9413300 5172000 22138000 31236000 6835 1045 6934 30464;30465;30466;30467;30468;30469;30470;30471;30472;30473 20122;20123;20124;20125;20126;20127;20128;20129;20130 20126 8 SGSPVATFK IWDLRQFKSGSPVATF GSPVATFKQHVAPVTS K S G F K Q 1 0 0 0 0 0 0 1 0 0 0 1 0 1 1 2 1 0 0 1 0 9 0 892.46543 Q9BQ67 Q9BQ67 342 350 GRWD1 Glutamate-rich WD repeat-containing protein 1 yes yes 2 0.036116 61.765 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 7150400 1630400 1406600 0 885540 0 3227900 6836 1438 6935 30474;30475;30476;30477 20131 20131 1 SGSQRQGSWDSRDVVLSTSPK TSNSNSSRSGSQRQGS VVLSTSPKLLATATAN R S G P K L 0 2 0 2 0 2 0 2 0 0 1 1 0 0 1 6 1 1 0 2 0 21 2 2276.1145 Q9P275;Q9P275-2;E9PEW0 Q9P275 564 584 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 4 2.4049E-06 65.765 By MS/MS By matching By matching By matching By matching By matching 1 4289300 4289300 0 0 0 0 0 6837 1576 6936 30478 20132 20132 1 SGSSFVHQASFK QNTKSANKSGSSFVHQ FVHQASFKFGQGDLPK K S G F K F 1 0 0 0 0 1 0 1 1 0 0 1 0 2 0 4 0 0 0 1 0 12 0 1280.6149 P49792 P49792 1447 1458 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 2;3 3.0513E-98 154.23 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 73563000 9951200 11806000 11113000 5890200 18234000 16569000 6838 945 6937 30479;30480;30481;30482;30483;30484;30485;30486;30487;30488;30489;30490;30491 20133;20134;20135;20136;20137;20138;20139;20140;20141;20142;20143 20143 11 SGSSSSSIPESQSNHSNQSDSGVSDTQPAGHVR SLSSSSIKSGSSSSSI TQPAGHVRSQSIVSSV K S G V R S 1 1 2 2 0 3 1 3 2 1 0 0 0 0 2 12 1 0 0 2 0 33 0 3312.4475 Q70E73;C9K0J5;Q70E73-5;C9J164;Q70E73-2;Q70E73-8;Q70E73-7;Q70E73-4;Q70E73-3;Q70E73-9;Q70E73-6 Q70E73 536 568 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes no 4 0.011064 24.623 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 6457700 0 821000 1538800 966960 1649300 1481600 6839 278 6938 30492;30493;30494;30495;30496 20144;20145 20144 2 SGTEPKENVENWQSSK TTNQHSTKSGTEPKEN VENWQSSKSAKRWKSG K S G S K S 0 0 2 0 0 1 3 1 0 0 0 2 0 0 1 3 1 1 0 1 0 16 1 1818.8384 O94913;E9PKN0;E9PQ01 O94913 577 592 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 yes no 3 0.0024516 57.173 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 5302600 1397200 0 0 0 1531500 2373900 6840 758 6939 30497;30498;30499 20146;20147 20147 2 SGTSSPQSPVFR LGLAIEPKSGTSSPQS SPQSPVFRHRTLENSP K S G F R H 0 1 0 0 0 1 0 1 0 0 0 0 0 1 2 4 1 0 0 1 0 12 0 1248.6099 Q8N556;E9PDT7 Q8N556 661 672 AFAP1 Actin filament-associated protein 1 yes no 2 0.0018291 83.226 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 9732600 527900 1375900 817550 981070 2536900 3493300 6841 423 6940 30500;30501;30502;30503;30504;30505 20148 20148 1 SGTSSPQSPVFRHR LGLAIEPKSGTSSPQS QSPVFRHRTLENSPIS K S G H R T 0 2 0 0 0 1 0 1 1 0 0 0 0 1 2 4 1 0 0 1 0 14 1 1541.7699 Q8N556;E9PDT7 Q8N556 661 674 AFAP1 Actin filament-associated protein 1 yes no 3 0.0053396 56.295 By matching By matching By matching By matching By MS/MS By matching 1 1 1388600 0 671400 0 0 717250 0 6842 423 6941 30506;30507 20149 20149 1 SGVISGGASDLKAK LDGTLFQKSGVISGGA GASDLKAKARRWDEKA K S G A K A 2 0 0 1 0 0 0 3 0 1 1 2 0 0 0 3 0 0 0 1 0 14 1 1288.6987 Q14683;G8JLG1 Q14683 649 662 SMC1A Structural maintenance of chromosomes protein 1A yes no 3 0.0011282 81.789 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 12599000 955420 2713700 1564500 1259700 3163200 2942200 6843 1110 6942 30508;30509;30510;30511;30512;30513 20150;20151;20152 20152 3 SGVNSELVK CEVLDLERSGVNSELV GVNSELVKRILNFLMH R S G V K R 0 0 1 0 0 0 1 1 0 0 1 1 0 0 0 2 0 0 0 2 0 9 0 931.49746 P35659;P35659-2;B4DFG0;D6RDA2;H0Y8X0 P35659 169 177 DEK Protein DEK yes no 2 0.0093753 102.06 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 85674000 11765000 9593500 26220000 6254600 13222000 18619000 6844 901 6943 30514;30515;30516;30517;30518;30519 20153;20154;20155;20156;20157 20155 5 SGVSLAALK AVAASKERSGVSLAAL GVSLAALKKALAAAGY R S G L K K 2 0 0 0 0 0 0 1 0 0 2 1 0 0 0 2 0 0 0 1 0 9 0 844.50182 P16403;P10412;P16402 P10412 55 63 HIST1H1C;HIST1H1E;HIST1H1D Histone H1.2;Histone H1.4;Histone H1.3 no no 2 0.00021076 112.11 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 152510000 26240000 12684000 9937900 6705000 39572000 57373000 6845 818;843 6944 30520;30521;30522;30523;30524;30525;30526 20158;20159;20160;20161;20162 20162 5 SGVSLAALKK AVAASKERSGVSLAAL VSLAALKKALAAAGYD R S G K K A 2 0 0 0 0 0 0 1 0 0 2 2 0 0 0 2 0 0 0 1 0 10 1 972.59678 P16403;P10412;P16402 P10412 55 64 HIST1H1C;HIST1H1E;HIST1H1D Histone H1.2;Histone H1.4;Histone H1.3 no no 2 1.6508E-14 121.61 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 1 91821000 20776000 8166600 7229000 5868400 29303000 20478000 6846 818;843 6945 30527;30528;30529;30530;30531;30532 20163;20164;20165 20165 3 SGWTSASSWAVRK SFDTPADRSGWTSASS ASSWAVRKTLPADVQN R S G R K T 2 1 0 0 0 0 0 1 0 0 0 1 0 0 0 4 1 2 0 1 0 13 1 1421.7052 Q99590-2;F8VXG7;Q99590 Q99590-2 825 837 SCAF11 Protein SCAF11 yes no 3 4.5665E-06 99.732 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 7074800 0 1253600 1523200 0 2014800 2283200 6847 547 6946 30533;30534;30535;30536 20166 20166 1 SGYFALGNEKGK HTMDFSPRSGYFALGN ALGNEKGKALMYRLHH R S G G K A 1 0 1 0 0 0 1 3 0 0 1 2 0 1 0 1 0 0 1 0 0 12 1 1269.6354 Q9Y5J1 Q9Y5J1 533 544 UTP18 U3 small nucleolar RNA-associated protein 18 homolog yes yes 2;3 0.0058486 70.728 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 12719000 900150 0 1782100 1023700 2479700 6533400 6848 1654 6947 30537;30538;30539;30540;30541 20167;20168;20169 20168 3 SGYRSGGGFSSGSAGIINYQR MSRQFSSRSGYRSGGG AGIINYQRRTTSSSTR R S G Q R R 1 2 1 0 0 1 0 6 0 2 0 0 0 1 0 5 0 0 2 0 0 21 1 2120.0035 P04264;CON__P04264 P04264 9 29 KRT1 Keratin, type II cytoskeletal 1 yes no 3 3.8867E-33 104.81 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 45404000 16963000 3210100 6510100 7113100 6929000 4679200 + 6849 789 6948 30542;30543;30544;30545;30546;30547 20170;20171;20172;20173;20174;20175;20176 20174 7 SGYRSGGGFSSGSAGIINYQRR MSRQFSSRSGYRSGGG GIINYQRRTTSSSTRR R S G R R T 1 3 1 0 0 1 0 6 0 2 0 0 0 1 0 5 0 0 2 0 0 22 2 2276.1046 P04264;CON__P04264 P04264 9 30 KRT1 Keratin, type II cytoskeletal 1 yes no 4 0.00090457 52.866 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 46781000 4768100 4994200 6145700 17246000 5865700 7760900 + 6850 789 6949 30548;30549;30550;30551;30552;30553 20177;20178;20179;20180 20179 4 SHACFQIILR FANSNSSRSHACFQII ACFQIILRAKGRMHGK R S H L R A 1 1 0 0 1 1 0 0 1 2 1 0 0 1 0 1 0 0 0 0 0 10 0 1243.6496 B7Z6Q6;Q99661;Q99661-2;B7Z7M6 B7Z6Q6 429 438 KIF2C Kinesin-like protein KIF2C yes no 3 0.0022402 99.568 By matching By matching By matching By matching By matching By MS/MS 1 5552900 0 0 0 0 0 5552900 6851 193 6950 30554 20181 20181 1 SHAHPGCLKEPHHPAQTGHVSHSSQK LTHSLSDKSHAHPGCL HVSHSSQKQCHKPQQQ K S H Q K Q 2 0 0 0 1 2 1 2 6 0 1 2 0 0 3 4 1 0 0 1 0 26 1 2850.3481 Q92576-2;Q92576;E7EVH3;E9PE34;B3KP41;D6R9X2 Q92576-2 512 537 PHF3 PHD finger protein 3 yes no 5 0.021105 38.175 By matching By matching By matching By matching By matching By MS/MS 1 769890 0 0 0 0 0 769890 6852 1353 6951 30555 20182 20182 1 SHAVGPQEIR GKRWGAQKSHAVGPQE AVGPQEIRERATVLQT K S H I R E 1 1 0 0 0 1 1 1 1 1 0 0 0 0 1 1 0 0 0 1 0 10 0 1092.5676 F8WAJ0;Q9H8H2 F8WAJ0 549 558 DDX31 Probable ATP-dependent RNA helicase DDX31 yes no 2 0.033976 55.721 By matching By matching By matching By matching By matching By MS/MS 1 1 845380 0 0 470740 0 0 374640 6853 565 6952 30556;30557 20183 20183 1 SHAVLLVK RLNQRSSRSHAVLLVK SHAVLLVKVDQRERLA R S H V K V 1 0 0 0 0 0 0 0 1 0 2 1 0 0 0 1 0 0 0 2 0 8 0 865.53854 Q14807;B7Z265;H3BRB3;H3BTH5 Q14807 246 253 KIF22 Kinesin-like protein KIF22 yes no 2 3.8944E-16 129.47 By matching By matching By matching By matching By matching By MS/MS 1 1 1 6563000 0 0 498560 402680 0 5661700 6854 1115 6953 30558;30559;30560 20184 20184 1 SHCIAEVEK CDKPLLEKSHCIAEVE HCIAEVEKDAIPENLP K S H E K D 1 0 0 0 1 0 2 0 1 1 0 1 0 0 0 1 0 0 0 1 0 9 0 1071.5019 CON__P02769 CON__P02769 310 318 yes yes 2 2.9369E-30 136.52 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 103620000 4952200 32333000 55127000 5294500 2963600 2946400 + 6855 294 6954 30561;30562;30563;30564;30565;30566 20185;20186;20187;20188;20189 20186 5 SHDGSVGKPYICQSCGK DRMSYHVRSHDGSVGK YICQSCGKGFSRPDHL R S H G K G 0 0 0 1 2 1 0 3 1 1 0 2 0 0 1 3 0 0 1 1 0 17 1 1878.8353 Q9HBE1-3;Q9HBE1;Q9HBE1-2;Q9HBE1-4 Q9HBE1-3 404 420 PATZ1 POZ-, AT hook-, and zinc finger-containing protein 1 yes no 3;4 0.00048113 82.837 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2 1 4050100 457260 0 661300 0 1825100 1106400 6856 1517 6955 30567;30568;30569;30570;30571 20190;20191 20191 2 SHEGGITKPYTCSVCGK DRMTYHVRSHEGGITK YTCSVCGKGFSRPDHL R S H G K G 0 0 0 0 2 0 1 3 1 1 0 2 0 0 1 2 2 0 1 1 0 17 1 1879.8557 Q14119 Q14119 223 239 VEZF1 Vascular endothelial zinc finger 1 yes yes 3;4 0.00041277 73.833 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 75456000 7601000 7283000 4638300 6277700 24804000 24853000 6857 1094 6956 30572;30573;30574;30575;30576;30577;30578;30579;30580;30581;30582;30583;30584 20192;20193;20194;20195;20196;20197;20198;20199;20200;20201;20202;20203 20199 10 SHESNAPGSAGGQASEKPR ASDILILRSHESNAPG GQASEKPREGTGKSRR R S H P R E 3 1 1 0 0 1 2 3 1 0 0 1 0 0 2 4 0 0 0 0 0 19 1 1865.8616 Q6PJG2;F6RU81 Q6PJG2 988 1006 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 3 0.0098627 41.323 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 967480 0 431980 535500 0 0 0 6858 1231 6957 30585;30586 20204;20205 20205 2 SHESNAPGSAGGQASEKPREGTGK ASDILILRSHESNAPG KPREGTGKSRRALPFS R S H G K S 3 1 1 0 0 1 3 5 1 0 0 2 0 0 2 4 1 0 0 0 0 24 2 2338.0898 Q6PJG2;F6RU81 Q6PJG2 988 1011 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 3;4 2.597E-07 61.963 By matching By matching By MS/MS By matching By MS/MS By MS/MS 2 1 1 2 1 1 21469000 3519100 3273100 3686900 3228000 6923100 839180 6859 1231 6958 30587;30588;30589;30590;30591;30592;30593;30594 20206;20207;20208 20206 3 SHFLLEQEK SVLEEQRRSHFLLEQE HFLLEQEKTQALSDKE R S H E K T 0 0 0 0 0 1 2 0 1 0 2 1 0 1 0 1 0 0 0 0 0 9 0 1129.5768 C9IZM8;B5MEB7;Q8WXE1-3;Q8WXE1-2;Q8WXE1;F8WE08 C9IZM8 69 77 ATRIP ATR-interacting protein yes no 2 3.4095E-19 125.57 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 8572400 0 1680700 1592600 776180 1368900 3154000 6860 176 6959 30595;30596;30597;30598;30599 20209;20210 20210 2 SHGFAAEFK GGLLEYARSHGFAAEF HGFAAEFKLVDQSGPP R S H F K L 2 0 0 0 0 0 1 1 1 0 0 1 0 2 0 1 0 0 0 0 0 9 0 992.47158 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 737 745 ADAR Double-stranded RNA-specific adenosine deaminase no no 2 0.013284 79.986 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 9672100 0 5194400 4265800 0 211960 0 6861 352;968 6960 30600;30601;30602 20211;20212 20211 2 SHGFAAEFKLVDQSGPPHEPK GGLLEYARSHGFAAEF SGPPHEPKFVYQAKVG R S H P K F 2 0 0 1 0 1 2 2 2 0 1 2 0 2 3 2 0 0 0 1 0 21 1 2277.1178 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 737 757 ADAR Double-stranded RNA-specific adenosine deaminase no no 4 5.6971E-74 121.48 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 90313000 4613700 8895500 21505000 9871100 4915200 40512000 6862 352;968 6961 30603;30604;30605;30606;30607;30608 20213;20214;20215;20216;20217 20214 3 SHGFAAEFKLVDQSGPPHEPKFVYQAK GGLLEYARSHGFAAEF PKFVYQAKVGGRWFPA R S H A K V 3 0 0 1 0 2 2 2 2 0 1 3 0 3 3 2 0 0 1 2 0 27 2 3013.5086 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 737 763 ADAR Double-stranded RNA-specific adenosine deaminase no no 5 4.9896E-12 66.711 By matching By matching By matching By matching By matching By MS/MS 1 58798000 0 0 0 0 0 58798000 6863 352;968 6962 30609 20218 20218 1 SHGLFGLNENQLR PVNMQVLKSHGLFGLN GLNENQLRILLLQNDP K S H L R I 0 1 2 0 0 1 1 2 1 0 3 0 0 1 0 1 0 0 0 0 0 13 0 1483.7532 Q96H79 Q96H79 142 154 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 3 2.9854E-24 116.51 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 217640000 0 75658000 15196000 17851000 21899000 87033000 6864 1390 6963 30610;30611;30612;30613;30614 20219;20220;20221;20222 20222 4 SHGLQNQPWQK SPCNKSPKSHGLQNQP LQNQPWQKLRNEKHHI K S H Q K L 0 0 1 0 0 3 0 1 1 0 1 1 0 0 1 1 0 1 0 0 0 11 0 1321.6527 Q12986;Q12986-2;F5GXD0;Q12986-3 Q12986 98 108 NFX1 Transcriptional repressor NF-X1 yes no 3 0.025408 51.286 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 6505300 649230 752260 1044200 669190 967580 2422900 6865 1066 6964 30615;30616;30617;30618;30619;30620 20223 20223 1 SHGVGHDRYLVVGRK QKYGLKSKSHGVGHDR RYLVVGRKRRKEDLLD K S H R K R 0 2 0 1 0 0 0 3 2 0 1 1 0 0 0 1 0 0 1 3 0 15 2 1678.9016 O15226;G3V1N1 O15226 649 663 NKRF NF-kappa-B-repressing factor yes no 4 0.036135 37.793 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 4561300 715230 0 973850 785410 2086800 0 6866 578 6965 30621;30622;30623;30624 20224 20224 1 SHISDQSPLSSK IQPLCPERSHISDQSP DQSPLSSKRKALEESE R S H S K R 0 0 0 1 0 1 0 0 1 1 1 1 0 0 1 5 0 0 0 0 0 12 0 1284.631 P42166 P42166 345 356 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2;3 4.6859E-12 109.16 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 3 2 2 2 2 2 68575000 8343700 9261400 9851400 5827200 14744000 20547000 6867 913 6966 30625;30626;30627;30628;30629;30630;30631;30632;30633;30634;30635;30636;30637 20225;20226;20227;20228;20229;20230;20231;20232;20233;20234;20235 20227 11 SHISTDAHSLNSAAQ QVLDNFFRSHISTDAH HSLNSAAQ________ R S H A Q - 3 0 1 1 0 1 0 0 2 1 1 0 0 0 0 4 1 0 0 0 0 15 0 1537.7121 H0YCY5;E9PNY0;G8JLP0;Q9UIF7-6;Q9UIF7-5;Q9UIF7-4;Q9UIF7-3;Q9UIF7-2;Q9UIF7;E5KP25 H0YCY5 199 213 MUTYH A/G-specific adenine DNA glycosylase yes no 3 0.026216 39.629 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6709400 530300 1303500 2102100 0 0 2773500 6868 337 6967 30638;30639;30640;30641 20236 20236 1 SHLACHEDKVPCQVCGK FATRDRLRSHLACHED VPCQVCGKYLRAAYMA R S H G K Y 1 0 0 1 3 1 1 1 2 0 1 2 0 0 1 1 0 0 0 2 0 17 1 2023.9026 Q9HBE1-3;Q9HBE1;Q9HBE1-2 Q9HBE1-3 459 475 PATZ1 POZ-, AT hook-, and zinc finger-containing protein 1 yes no 4 0.019052 40.242 By matching By MS/MS By matching By matching By matching By matching 1 1 3374300 0 1650200 1724100 0 0 0 6869 1517 6968 30642;30643 20237 20237 1 SHLGPKPFGCDVCGK CSLLSHQRSHLGPKPF FGCDVCGKEFARGSDL R S H G K E 0 0 0 1 2 0 0 3 1 0 1 2 0 1 2 1 0 0 0 1 0 15 1 1657.7705 Q96MX3 Q96MX3 296 310 ZNF48 Zinc finger protein 48 yes yes 3 0.00073258 79.804 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 10006000 0 1257100 0 0 3789200 4959300 6870 1408 6969 30644;30645;30646 20238;20239 20238 2 SHLIQVEREKMQMELSHK RAEQIRSKSHLIQVER MQMELSHKRARVELER K S H H K R 0 1 0 0 0 2 3 0 2 1 2 2 2 0 0 2 0 0 0 1 0 18 2 2222.13 C9JJ38;Q9Y6D9 C9JJ38 62 79 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 yes no 3 0.010939 74.141 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 161520000 0 0 0 161520000 0 0 6871 252 6970 30647;30648 20240;20241 20240 20;21 2 SHLLNCCPHDVLSGTR FSDDRVCKSHLLNCCP HDVLSGTRMDLGECLK K S H T R M 0 1 1 1 2 0 0 1 2 0 3 0 0 0 1 2 1 0 0 1 0 16 0 1864.8672 B7Z500;Q9Y383-2;Q9Y383;B7Z4Q3;C9JWT3 B7Z500 35 50 LUC7L2;C7orf55 Putative RNA-binding protein Luc7-like 2;UPF0562 protein C7orf55 yes no 3 0.022015 39.531 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2885500 0 968810 0 0 523500 1393100 6872 186 6971 30649;30650;30651 20242 20242 1 SHLRTHTGERPFACDWQGCDK YYKSSHLKSHLRTHTG CDWQGCDKKFARSDEL K S H D K K 1 2 0 2 2 1 1 2 2 0 1 1 0 1 1 1 2 1 0 0 0 21 2 2557.1339 Q9BXK1 Q9BXK1 146 166 KLF16 Krueppel-like factor 16 yes yes 4 0.035647 32.121 By matching By matching By matching By MS/MS By matching By matching 1 1 1 4261000 0 0 2696700 921020 643200 0 6873 1462 6972 30652;30653;30654 20243 20243 1 SHPAMSPGTPGPTMGR AWAAAQQRSHPAMSPG TPGPTMGRSQGSPMDP R S H G R S 1 1 0 0 0 0 0 3 1 0 0 0 2 0 4 2 2 0 0 0 0 16 0 1579.7235 Q8NFD5;Q8NFD5-2;Q8NFD5-3;G3XAA0 Q8NFD5 497 512 ARID1B AT-rich interactive domain-containing protein 1B yes no 3 0.0016469 58.885 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3358600 164120 0 0 369190 1416000 1409300 6874 1326 6973 30655;30656;30657;30658 20244 20244 1 SHPPDKWAQGAGAK TCPDLGAKSHPPDKWA WAQGAGAKGYLGAVKP K S H A K G 3 0 0 1 0 1 0 2 1 0 0 2 0 0 2 1 0 1 0 0 0 14 1 1448.7161 O00257 O00257 192 205 CBX4 E3 SUMO-protein ligase CBX4 yes yes 3 0.01466 47.621 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 2203200 415090 580920 0 161410 497820 547980 6875 687 6974 30659;30660;30661;30662;30663 20245 20245 1 SHRCPFPDCAK AAPSAAAKSHRCPFPD CPFPDCAKAYYKSSHL K S H A K A 1 1 0 1 2 0 0 0 1 0 0 1 0 1 2 1 0 0 0 0 0 11 1 1373.5969 Q9BXK1 Q9BXK1 126 136 KLF16 Krueppel-like factor 16 yes yes 3 0.018332 57.164 By MS/MS By matching By matching By matching By matching By matching 2 4195800 4195800 0 0 0 0 0 6876 1462 6975 30664;30665 20246;20247 20247 2 SHRPQQNVGVQGAATR TLAPSNLKSHRPQQNV GVQGAATRQQQSEMFP K S H T R Q 2 2 1 0 0 3 0 2 1 0 0 0 0 0 1 1 1 0 0 2 0 16 1 1704.8768 O75362 O75362 820 835 ZNF217 Zinc finger protein 217 yes yes 3 6.2066E-07 91.616 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 3912300 0 526950 668860 337100 1020800 1358600 6877 740 6976 30666;30667;30668;30669;30670 20248;20249;20250;20251 20251 4 SHRSYSCQVTHEGSTVEK SLTPEQWKSHRSYSCQ HEGSTVEKTVAPTECS K S H E K T 0 1 0 0 1 1 2 1 2 0 0 1 0 0 0 4 2 0 1 2 0 18 1 2090.944 P0CG05;P0CG04;P0CF74;B9A064 P0CG05 81 98 IGLC2;IGLC1;IGLC6;IGLL5 Ig lambda-2 chain C regions;Ig lambda-1 chain C regions;Ig lambda-6 chain C region;Immunoglobulin lambda-like polypeptide 5 yes no 4 0.0016347 58.688 By matching By matching By MS/MS By matching By matching By matching 1 1 1 2902300 0 0 2159300 539350 203630 0 6878 216 6977 30671;30672;30673 20252 20252 1 SHRTEMDWVLK HRYIEVFKSHRTEMDW TEMDWVLKHSGPNSAD K S H L K H 0 1 0 1 0 0 1 0 1 0 1 1 1 0 0 1 1 1 0 1 0 11 1 1400.6871 P52597;B4DKS8 P52597 88 98 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 3 1.1005E-07 107.55 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 4285300 0 928870 1178300 745290 1432800 0 6879 958 6978 30674;30675;30676;30677 20253;20254;20255;20256 20255 4 SHSAPSEVGFSDARHVTVR PAETIRWKSHSAPSEV DARHVTVRNAWKSRRD K S H V R N 2 2 0 1 0 0 1 1 2 0 0 0 0 1 1 4 1 0 0 3 0 19 1 2037.998 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 903 921 LUZP1 Leucine zipper protein 1 yes no 4 0.00069911 63.681 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 8132400 898310 1052400 1320500 775060 1885900 2200200 6880 1265 6979 30678;30679;30680;30681;30682;30683 20257 20257 1 SHSAQQPVLVSQTLDIHK EAQGSLTKSHSAQQPV SQTLDIHKRMQPLHIQ K S H H K R 1 0 0 1 0 3 0 0 2 1 2 1 0 0 1 3 1 0 0 2 0 18 0 1987.0487 Q9UHF7;Q9UHF7-3;Q9UHF7-2;E5RFF3;H0YAV4 Q9UHF7 1013 1030 TRPS1 Zinc finger transcription factor Trps1 yes no 3;4 1.4241E-45 117.53 By MS/MS By matching By MS/MS By matching By matching By MS/MS 2 1 2 1 2 11827000 3025400 1427100 4012100 253230 0 3109500 6881 1594 6980 30684;30685;30686;30687;30688;30689;30690;30691 20258;20259;20260;20261;20262;20263;20264 20258 7 SHSPSASQSGSQLRNR TTQSPTPRSHSPSASQ SGSQLRNRSVSGKRIC R S H N R S 1 2 1 0 0 2 0 1 1 0 1 0 0 0 1 6 0 0 0 0 0 16 1 1697.8194 E9PMS6;Q8WWI1-3;E9PMT2;Q8WWI1 E9PMS6 1183 1198 LMO7 LIM domain only protein 7 yes no 3 0.014856 42.785 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 868830 0 350820 518010 0 0 0 6882 460 6981 30692;30693 20265;20266 20266 2 SHTFPELAYRK EVVFPNGKSHTFPELA FPELAYRKEMVRADLI K S H R K E 1 1 0 0 0 0 1 0 1 0 1 1 0 1 1 1 1 0 1 0 0 11 1 1347.6935 Q9NSD9;F5H6Y1 Q9NSD9 296 306 FARSB Phenylalanine--tRNA ligase beta subunit yes no 3 0.0013815 86.344 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 8422200 0 1774300 0 598540 1384500 4664800 6883 1543 6982 30694;30695;30696;30697 20267;20268;20269 20267 3 SHTGERPFLCSECGK KDLRNHERSHTGERPF FLCSECGKSFSRSSSL R S H G K S 0 1 0 0 2 0 2 2 1 0 1 1 0 1 1 2 1 0 0 0 0 15 1 1763.7719 Q96K58;C9JHH8 Q96K58 217 231 ZNF668 Zinc finger protein 668 yes no 3 0.0058455 52.101 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 6066500 0 835620 643550 925620 2087500 1574200 6884 1401 6983 30698;30699;30700;30701;30702 20270;20271 20270 2 SHTILLVQPTKRPEGR ________________ PTKRPEGRTYADYESV M S H G R T 0 2 0 0 0 1 1 1 1 1 2 1 0 0 2 1 2 0 0 1 0 16 2 1831.0428 G3V279;P84090 G3V279 2 17 ERH Enhancer of rudimentary homolog yes no 3;4 5.9182E-12 99.941 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 496020000 131000000 40704000 102770000 124620000 11702000 85227000 6885 581 6984 30703;30704;30705;30706;30707;30708;30709;30710;30711;30712;30713;30714 20272;20273;20274;20275;20276;20277;20278;20279;20280 20272 8 SHVCEHCNAAFR SLGLKTPKSHVCEHCN EHCNAAFRTNYHLQRH K S H F R T 2 1 1 0 2 0 1 0 2 0 0 0 0 1 0 1 0 0 0 1 0 12 0 1486.6194 Q9UQR1;F5H173 Q9UQR1 170 181 ZNF148 Zinc finger protein 148 yes no 3 0.0010559 91.701 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 4710400 349650 848380 1202800 235900 787260 1286400 6886 1626 6985 30715;30716;30717;30718;30719;30720 20281;20282;20283;20284 20282 4 SHYNINCNSTRTPVAK VQLTEGSRSHYNINCN STRTPVAKELNYNLDT R S H A K E 1 1 3 0 1 0 0 0 1 1 0 1 0 0 1 2 2 0 1 1 0 16 1 1860.8901 Q9NSV4-6;A8MYX0;Q9NSV4-5;C9JL55;Q9NSV4-4;C9JDG1;Q9NSV4;C9JDG0 Q9NSV4-6 1049 1064 DIAPH3 Protein diaphanous homolog 3 yes no 3 0.017188 67.136 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 6887 54 6986 30721 20285 20285 1 SIADSEESEAYK PPCGATKRSIADSEES SEESEAYKSLFTTHSS R S I Y K S 2 0 0 1 0 0 3 0 0 1 0 1 0 0 0 3 0 0 1 0 0 12 0 1327.578 Q9BY42;A8MSH5 Q9BY42 268 279 RTFDC1 Protein RTF2 homolog yes no 2 0.0019102 85.973 By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 1 1 1 1 8727700 1721300 1495300 1462800 812340 1377000 1858900 6888 38 6987 30722;30723;30724;30725;30726;30727;30728 20286;20287;20288;20289 20286 4 SIAHPEEISSNSQVR CGRTLRNRSIAHPEEI ISSNSQVRSRSPKKRP R S I V R S 1 1 1 0 0 1 2 0 1 2 0 0 0 0 1 4 0 0 0 1 0 15 0 1652.8118 Q8IYH5-2;Q8IYH5;Q8IYH5-4;C9JUA4 Q8IYH5-2 32 46 ZZZ3 ZZ-type zinc finger-containing protein 3 yes no 3 0.00042194 83.633 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 8364800 0 1610500 873190 0 890230 4990800 6889 1290 6988 30729;30730;30731;30732 20290;20291;20292;20293 20293 4 SIAPSIFGGTDMKK NVYEVISKSIAPSIFG FGGTDMKKAIACLLFG K S I K K A 1 0 0 1 0 0 0 2 0 2 0 2 1 1 1 2 1 0 0 0 0 14 1 1450.749 P33992;B1AHB1;E7EQY5 P33992 338 351 MCM5 DNA replication licensing factor MCM5 yes no 3 3.5776E-20 107.93 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 17093000 0 3284200 0 0 1825400 11984000 6890 892 6989 30733;30734;30735 20294;20295;20296 20294 3 SICEVLDLER KFRNAMLKSICEVLDL CEVLDLERSGVNSELV K S I E R S 0 1 0 1 1 0 2 0 0 1 2 0 0 0 0 1 0 0 0 1 0 10 0 1232.6071 P35659;P35659-2;B4DFG0;D6RDA2;H0Y8X0 P35659 159 168 DEK Protein DEK yes no 2 0.0026978 99.343 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 118710000 10510000 0 0 108200000 0 0 6891 901 6990 30736;30737 20297;20298 20298 2 SIEGCCICR FHKPKMYRSIEGCCIC IEGCCICRAKSSSSRF R S I C R A 0 1 0 0 3 0 1 1 0 2 0 0 0 0 0 1 0 0 0 0 0 9 0 1153.4678 F5H6U2;F5GZ82;Q9NP50;B7Z287;H0YGG0 F5H6U2 12 20 FAM60A Protein FAM60A yes no 2 0.0081925 87.639 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 9156900 0 743570 952210 0 3017700 4443500 6892 183 6991 30738;30739;30740;30741 20299;20300 20299 2 SIEIPRPVDGVEVPGCGK CSKYGLVKSIEIPRPV VEVPGCGKIFVEFTSV K S I G K I 0 1 0 1 1 0 2 3 0 2 0 1 0 0 3 1 0 0 0 3 0 18 1 1907.9775 P26368-2;P26368 P26368-2 410 427 U2AF2 Splicing factor U2AF 65 kDa subunit yes no 3 0.0054616 46.494 By matching By MS/MS By matching By matching By matching By matching 1 32861000 0 32861000 0 0 0 0 6893 879 6992 30742 20301 20301 1 SIEYLEEDAQK RPFIEALKSIEYLEED YLEEDAQKSAQEGVLG K S I Q K S 1 0 0 1 0 1 3 0 0 1 1 1 0 0 0 1 0 0 1 0 0 11 0 1323.6194 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91 Q96L91-4 1992 2002 EP400 E1A-binding protein p400 yes no 2 0.0033559 83.045 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2295400 317110 0 0 0 575940 1402300 6894 1405 6993 30743;30744;30745 20302 20302 1 SIFASPESVTGK NKKGQVKRSIFASPES SPESVTGKVGVGTCGI R S I G K V 1 0 0 0 0 0 1 1 0 1 0 1 0 1 1 3 1 0 0 1 0 12 0 1221.6241 O75940 O75940 197 208 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 2 0.018186 52.79 By matching By matching By MS/MS By matching By matching By matching 1 1 11816000 0 0 5305200 0 6511300 0 6895 751 6994 30746;30747 20303 20303 1 SIFDHIKLPQASK VKKEQEFRSIFDHIKL IKLPQASKSTSESFIQ R S I S K S 1 0 0 1 0 1 0 0 1 2 1 2 0 1 1 2 0 0 0 0 0 13 1 1482.8195 Q9NYF8-2;Q9NYF8;Q9NYF8-4;E9PK09;E9PQN2;E9PKI6;E9PJA7;Q9NYF8-3;E9PK91 Q9NYF8-2 585 597 BCLAF1 Bcl-2-associated transcription factor 1 no no 3 9.4018E-06 99.669 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 36692000 30089000 0 0 6603300 0 0 6896 1563;452 6995 30748;30749 20304;20305 20304 2 SIFQHIQSAQSQR NKKEQEFRSIFQHIQS IQSAQSQRSPSELFAQ R S I Q R S 1 1 0 0 0 4 0 0 1 2 0 0 0 1 0 3 0 0 0 0 0 13 0 1528.7746 Q9Y2W1 Q9Y2W1 609 621 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.0068344 57.434 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 13029000 0 1313700 1397400 1657500 3181000 5479100 6897 1639 6996 30750;30751;30752;30753;30754 20306;20307;20308;20309 20309 4 SIGAASPRPQSLEK TADPRLDKSIGAASPR PRPQSLEKTSVPTGLR K S I E K T 2 1 0 0 0 1 1 1 0 1 1 1 0 0 2 3 0 0 0 0 0 14 1 1439.7732 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 2095 2108 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 2;3 2.5287E-05 93.766 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 1 1 2 16432000 1067000 3595200 4577300 1392900 1567500 4232400 6898 1404 6997 30755;30756;30757;30758;30759;30760;30761;30762;30763;30764 20310;20311;20312;20313;20314 20311 5 SIGSAVDQGNESIVAK PGPVKKTRSIGSAVDQ GNESIVAKTTVTVPND R S I A K T 2 0 1 1 0 1 1 2 0 2 0 1 0 0 0 3 0 0 0 2 0 16 0 1573.7948 Q9H0H5;F8VRD2;F8W1E5 Q9H0H5 203 218 RACGAP1 Rac GTPase-activating protein 1 yes no 2 0.00025916 84.41 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 46012000 0 9288300 8647400 3432600 7826400 16817000 6899 1479 6998 30765;30766;30767;30768;30769 20315;20316;20317;20318 20318 4 SIIEGPIIK QVKAIYNKSIIEGPII IIEGPIIKLMILPDPE K S I I K L 0 0 0 0 0 0 1 1 0 4 0 1 0 0 1 1 0 0 0 0 0 9 0 968.59063 A6NHR9;A6NHR9-2;A6NHR9-3 A6NHR9 1350 1358 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes no 2 0.0005846 110.41 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 13110000 0 3720100 0 2767100 0 6623000 6900 23 6999 30770;30771;30772 20319;20320 20319 2 SIKASTATAEQFFQK FLFQDTPRSIKASTAT TAEQFFQKLRNKHEFT R S I Q K L 3 0 0 0 0 2 1 0 0 1 0 2 0 2 0 2 2 0 0 0 0 15 1 1655.8519 F8VXR5;F8VRQ0;F8VZ72;F8W1A2;F5H5N4;F8VVB6;Q99435-4;Q99435;Q99435-2;Q99435-3 F8VXR5 65 79 NELL2 Protein kinase C-binding protein NELL2 yes no 3 0.0061278 51.726 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 10813000 0 2266900 1731400 1443900 2119700 3251300 6901 520 7000 30773;30774;30775;30776;30777 20321 20321 1 SIKENSNAAIIK VPSASNSKSIKENSNA NSNAAIIKRFNHHSAM K S I I K R 2 0 2 0 0 0 1 0 0 3 0 2 0 0 0 2 0 0 0 0 0 12 1 1286.7194 B3KXE0;P32780;E9PI26 B3KXE0 178 189 GTF2H1 General transcription factor IIH subunit 1 yes no 2 0.010966 65.295 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 2521800 0 512750 827370 466360 715290 0 6902 77 7001 30778;30779;30780;30781 20322 20322 1 SIKNVTELK GKAASHIKSIKNVTEL IKNVTELKLSDNPAWE K S I L K L 0 0 1 0 0 0 1 0 0 1 1 2 0 0 0 1 1 0 0 1 0 9 1 1030.6023 Q9BY42;A8MSH5;A2A2L5;A2A2L6 Q9BY42 84 92 RTFDC1 Protein RTF2 homolog yes no 2 2.8162E-07 118.71 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 3868900 0 2128700 0 745220 0 995000 6903 38 7002 30782;30783;30784 20323;20324 20323 2 SILAKPSSSPDPR LTSVMVPKSILAKPSS PSSSPDPRYLSVPPSP K S I P R Y 1 1 0 1 0 0 0 0 0 1 1 1 0 0 3 4 0 0 0 0 0 13 1 1353.7252 Q9BTC0;Q9BTC0-1 Q9BTC0 1011 1023 DIDO1 Death-inducer obliterator 1 yes no 3 0.0022761 67.118 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 19913000 2115800 6193900 0 0 3650600 7952700 6904 1447 7003 30785;30786;30787;30788 20325;20326;20327 20325 3 SILISSVASVHHANGLAK QQQQLKNKSILISSVA HHANGLAKSSTTVSSF K S I A K S 3 0 1 0 0 0 0 1 2 2 2 1 0 0 0 4 0 0 0 2 0 18 0 1803.0003 Q13620-1;Q13620 Q13620-1 143 160 CUL4B Cullin-4B yes no 3 2.5486E-73 125.5 By MS/MS By matching By matching By matching By matching By matching 1 0 0 0 0 0 0 0 6905 1090 7004 30789 20328 20328 1 SILLATDVASR NKFKAKARSILLATDV LATDVASRGLDIPHVD R S I S R G 2 1 0 1 0 0 0 0 0 1 2 0 0 0 0 2 1 0 0 1 0 11 0 1144.6452 Q9H0S4;G5E955 Q9H0S4 315 325 DDX47 Probable ATP-dependent RNA helicase DDX47 yes no 2 6.1909E-05 100.93 By matching By MS/MS By matching By matching By matching By matching 1 7379100 0 7379100 0 0 0 0 6906 1481 7005 30790 20329 20329 1 SILTSTTTVEHAPIWR DRDREREKSILTSTTT VEHAPIWRPGTEQSSG K S I W R P 1 1 0 0 0 0 1 0 1 2 1 0 0 0 1 2 4 1 0 1 0 16 0 1810.9577 C9J7T7;C9JE98;C9J239;Q9Y618-5;C9J0Q5;Q9Y618-4;C9JJF6;C9JFD3;Q9Y618-3;Q9Y618;Q9Y618-2;H7C0P3;H7C1J7 C9J7T7 1374 1389 NCOR2 Nuclear receptor corepressor 2 yes no 2 0.036198 71.513 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 6907 224 7006 30791 20330 20330 1 SILVSPTGPSR AEFKKTDKSILVSPTG VSPTGPSRVAFDPEQK K S I S R V 0 1 0 0 0 0 0 1 0 1 1 0 0 0 2 3 1 0 0 1 0 11 0 1112.619 Q14684-2;Q14684 Q14684-2 684 694 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 2 1.8275E-13 118.23 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 103560000 22884000 12239000 9842300 8043400 19045000 31511000 6908 1111 7007 30792;30793;30794;30795;30796;30797;30798 20331;20332;20333;20334;20335 20333 5 SINAFRETAK KVPGGEDKSINAFRET NAFRETAKQKLDPAAS K S I A K Q 2 1 1 0 0 0 1 0 0 1 0 1 0 1 0 1 1 0 0 0 0 10 1 1135.5986 P46013;F5H4V4;P46013-2 P46013 1430 1439 MKI67 Antigen KI-67 no no 2 1.9905E-23 127.87 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 25410000 0 5989700 4556700 1103300 4944700 8815700 6909 919;920 7008 30799;30800;30801;30802;30803 20336;20337;20338;20339;20340 20338 5 SINAFRETAKQK KVPGGEDKSINAFRET FRETAKQKLDPAASVT K S I Q K L 2 1 1 0 0 1 1 0 0 1 0 2 0 1 0 1 1 0 0 0 0 12 2 1391.7521 P46013;F5H4V4;P46013-2 P46013 1430 1441 MKI67 Antigen KI-67 no no 3 0.01042 70.685 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 145700000 3094800 36454000 38953000 13796000 19975000 33424000 6910 919;920 7009 30804;30805;30806;30807;30808;30809 20341;20342;20343 20341 3 SINFLHQVCHDQTPTTK RKVLLIGKSINFLHQV HDQTPTTKMIAVTKSA K S I T K M 0 0 1 1 1 2 0 0 2 1 1 1 0 1 1 1 3 0 0 1 0 17 0 2024.9738 Q96CW5-2;Q96CW5 Q96CW5-2 489 505 TUBGCP3 Gamma-tubulin complex component 3 yes no 3 0.0021353 52.862 By matching By matching By matching By matching By matching By MS/MS 1 950800 0 0 0 0 0 950800 6911 1376 7010 30810 20344 20344 1 SINQQSGAHVELQR GKGGENIKSINQQSGA GAHVELQRNPPPNSDP K S I Q R N 1 1 1 0 0 3 1 1 1 1 1 0 0 0 0 2 0 0 0 1 0 14 0 1565.791 Q96I24 Q96I24 379 392 FUBP3 Far upstream element-binding protein 3 yes yes 2;3 5.8517E-05 91.845 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2 11752000 0 2933600 0 571420 2368500 5878600 6912 1394 7011 30811;30812;30813;30814;30815 20345;20346;20347 20346 3 SIPAGAEPGEK KSDLKAARSIPAGAEP AGAEPGEKGSARKAGP R S I E K G 2 0 0 0 0 0 2 2 0 1 0 1 0 0 2 1 0 0 0 0 0 11 0 1054.5295 Q9H910;B4DLH4;H3BU16;Q9H910-2;A6NGP5 Q9H910 132 142 HN1L Hematological and neurological expressed 1-like protein yes no 2 0.012048 62.466 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 4938900 0 873450 1027800 0 801340 2236300 6913 98 7012 30816;30817;30818;30819 20348;20349 20349 2 SIPALSMETQK PCNSAEPKSIPALSME ALSMETQKLGSVLSPE K S I Q K L 1 0 0 0 0 1 1 0 0 1 1 1 1 0 1 2 1 0 0 0 0 11 0 1203.6169 Q96JM3 Q96JM3 126 136 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.0046624 75.819 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 32597000 4139200 4004700 8658400 1961800 7828800 6004000 6914 1399 7013 30820;30821;30822;30823;30824;30825 20350;20351;20352 20352 3 SIPEPLPAADMKK QETLISQKSIPEPLPA LPAADMKKKIEGYQEF K S I K K K 2 0 0 1 0 0 1 0 0 1 1 2 1 0 3 1 0 0 0 0 0 13 1 1395.7432 Q14865-2;Q14865 Q14865-2 240 252 ARID5B AT-rich interactive domain-containing protein 5B yes no 3 0.015258 44.829 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 6582100 0 1598900 983630 857800 924810 2217000 6915 1117 7014 30826;30827;30828;30829;30830 20353;20354 20353 2 SIPSLVDGFKPGQRK FSNSDNERSIPSLVDG GFKPGQRKVLFTCFKR R S I R K V 0 1 0 1 0 1 0 2 0 1 1 2 0 1 2 2 0 0 0 1 0 15 2 1627.9046 Q02880-2;Q02880;E9PCY5 Q02880-2 730 744 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 3;4 9.4744E-31 117.03 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 62856000 0 17750000 0 0 0 45106000 6916 1035 7015 30831;30832;30833 20355;20356;20357 20355 3 SIRPDNMSEYSK DDYIKFLRSIRPDNMS DNMSEYSKQMQRFNVG R S I S K Q 0 1 1 1 0 0 1 0 0 1 0 1 1 0 1 3 0 0 1 0 0 12 1 1425.6558 Q92769;H3BM24;B3KRS5;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;Q13547;Q5TEE2 Q13547 78 89 HDAC2;HDAC1 Histone deacetylase 2;Histone deacetylase;Histone deacetylase 1 no no 3 5.9709E-12 109 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 1 2 2 113940000 2799200 16102000 24538000 2433600 5393300 62674000 6917 1086;1358 7016;7017 30834;30835;30836;30837;30838;30839;30840;30841;30842;30843 20358;20359;20360;20361 20358 132 4 SIRPLLEGRDLLAAAK NMTEIQHKSIRPLLEG RDLLAAAKTGSGKTLA K S I A K T 3 2 0 1 0 0 1 1 0 1 4 1 0 0 1 1 0 0 0 0 0 16 2 1722.0152 Q9NVP1 Q9NVP1 209 224 DDX18 ATP-dependent RNA helicase DDX18 yes yes 3;4 0.00091486 80.371 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 31824000 0 0 0 6672400 25152000 0 6918 1550 7018 30844;30845 20362;20363 20362 2 SISELSDQYKQEK NYIDEREKSISELSDQ SDQYKQEKLILLQRCE K S I E K L 0 0 0 1 0 2 2 0 0 1 1 2 0 0 0 3 0 0 1 0 0 13 1 1553.7573 P49454 P49454 1010 1022 CENPF Centromere protein F yes yes 2 1.937E-05 96.866 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1904900 0 689370 462170 0 753320 0 6919 936 7019 30846;30847;30848 20364 20364 0 SISGENATSESEFTLGGDDSGVSMNPARSALALLAMAQSGDAVSVK QEFVSSSRSISGENAT SGDAVSVKIEEENQDL R S I V K I 7 1 2 3 0 1 3 5 0 1 4 1 2 1 1 9 2 0 0 3 0 46 1 4527.1381 C9JJ88;Q2KHR3-2;Q2KHR3;H0YCQ7 C9JJ88 774 819 QSER1 Glutamine and serine-rich protein 1 yes no 6 0.020654 6.6305 By MS/MS By matching By matching By matching By matching By matching 1 2680100 2680100 0 0 0 0 0 6920 253 7020 30849 20365 20365 0 SISISVAR LVNLGGSKSISISVAR SISISVARGGGRGSGF K S I A R G 1 1 0 0 0 0 0 0 0 2 0 0 0 0 0 3 0 0 0 1 0 8 0 831.48142 P04264;CON__P04264 P04264 75 82 KRT1 Keratin, type II cytoskeletal 1 yes no 2 0.0064467 95.909 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 2 1 700540000 16713000 688440 216040000 181200000 133040000 152860000 + 6921 789 7021 30850;30851;30852;30853;30854;30855;30856 20366;20367 20367 2 SISLASCHQLHSK SDLDQKMKSISLASCH SCHQLHSKFLDQSLGE K S I S K F 1 0 0 0 1 1 0 0 2 1 2 1 0 0 0 4 0 0 0 0 0 13 0 1466.73 O75691 O75691 2531 2543 UTP20 Small subunit processome component 20 homolog yes yes 3 0.0011406 75.89 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 13309000 1180800 2004800 1406000 1057900 2112800 5546200 6922 750 7022 30857;30858;30859;30860;30861;30862 20368;20369;20370;20371;20372;20373 20369 6 SISLYYTGEKGQNQDYRGGK QGTEIDGRSISLYYTG NQDYRGGKNSTWSGES R S I G K N 0 1 1 1 0 2 1 4 0 1 1 2 0 0 0 2 1 0 3 0 0 20 2 2263.0869 E7EX81;P19338;H7BY16;Q9BQ02 E7EX81 350 369 NCL Nucleolin yes no 3;4 0.00042784 73.498 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 2 2 2 15493000 3366300 2731400 0 0 4424000 4971800 6923 397 7023 30863;30864;30865;30866;30867;30868;30869;30870 20374;20375;20376;20377;20378 20376 5 SISSPSVSSETMDKPVDLSTRK EEPDSITKSISSPSVS PVDLSTRKEIDTDSTS K S I R K E 0 1 0 2 0 0 1 0 0 1 1 2 1 0 2 7 2 0 0 2 0 22 2 2350.1686 P49792;E9PGT0 P49792 2802 2823 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 4 0.025895 33.37 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 6160200 0 1442800 1407300 1145400 2164700 0 6924 945 7024 30871;30872;30873;30874 20379 20379 1 SITNTTVCTK PWQSSETRSITNTTVC TNTTVCTKCGGAGHIA R S I T K C 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 1 4 0 0 1 0 10 0 1123.5543 Q15637-6;Q15637-4;Q15637-3;Q15637-2;Q15637 Q15637-6 272 281 SF1 Splicing factor 1 no no 2 2.4731E-05 110.84 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 2 1 119140000 17487000 21368000 33056000 20442000 0 26790000 6925 1141 7025 30875;30876;30877;30878;30879;30880 20380;20381;20382;20383 20382 4 SIYFSSPK PTTPGPYRSIYFSSPK SIYFSSPKGHLTRLGL R S I P K G 0 0 0 0 0 0 0 0 0 1 0 1 0 1 1 3 0 0 1 0 0 8 0 927.47018 G5E9E2;Q5J9I4;P29372-2;P29372;A2IDA3 G5E9E2 56 63 MPG DNA-3-methyladenine glycosylase yes no 2 0.022116 78.149 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 41683000 0 6486000 1816600 2350300 4896400 26134000 6926 594 7026 30881;30882;30883;30884;30885 20384 20384 1 SIYFSSPKGHLTR PTTPGPYRSIYFSSPK SPKGHLTRLGLEFFDQ R S I T R L 0 1 0 0 0 0 0 1 1 1 1 1 0 1 1 3 1 0 1 0 0 13 1 1491.7834 G5E9E2;Q5J9I4;P29372-2;P29372;A2IDA3 G5E9E2 56 68 MPG DNA-3-methyladenine glycosylase yes no 3 0.0082784 57.52 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 10263000 457520 0 0 546320 1522700 7736300 6927 594 7027 30886;30887;30888;30889 20385;20386 20385 2 SIYGEKFEDENFILK RHNGTGGKSIYGEKFE EDENFILKHTGPGILS K S I L K H 0 0 1 1 0 0 3 1 0 2 1 2 0 2 0 1 0 0 1 0 0 15 1 1830.904 P62937;Q567Q0;F8WE65;C9J5S7 P62937 77 91 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 3 0.00054668 71.08 By matching By matching By matching By matching By MS/MS By matching 1 32075000 0 0 0 0 32075000 0 6928 999 7028 30890 20387 20387 1 SKAEAESLYQSK QYEDIAQKSKAEAESL AESLYQSKYEELQITA K S K S K Y 2 0 0 0 0 1 2 0 0 0 1 2 0 0 0 3 0 0 1 0 0 12 1 1339.662 P04264;CON__P04264 P04264 365 376 KRT1 Keratin, type II cytoskeletal 1 yes no 2;3 4.5939E-07 104.7 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 3 2 2 2 3 43938000 3863100 12590000 16678000 5786100 2345600 2675400 + 6929 789 7029 30891;30892;30893;30894;30895;30896;30897;30898;30899;30900;30901;30902;30903;30904 20388;20389;20390;20391;20392 20389 5 SKAPASSSSNPEEVQK LPVSPAARSKAPASSS SNPEEVQKEGPTALQD R S K Q K E 2 0 1 0 0 1 2 0 0 0 0 2 0 0 2 5 0 0 0 1 0 16 1 1644.7955 Q9BWU0 Q9BWU0 87 102 SLC4A1AP Kanadaptin yes yes 3 0.0025597 61.495 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 2057900 0 686800 782080 0 0 589060 6930 1460 7030 30905;30906;30907 20393;20394 20394 2 SKDIFDQLAK IKKFSKTRSKDIFDQL DIFDQLAKSLAPSIHG R S K A K S 1 0 0 2 0 1 0 0 0 1 1 2 0 1 0 1 0 0 0 0 0 10 1 1163.6186 P25205 P25205 292 301 MCM3 DNA replication licensing factor MCM3 yes yes 2 9.795E-77 151.13 By matching By matching By MS/MS By matching By matching By matching 1 1 23312000 0 0 18704000 0 4608400 0 6931 873 7031 30908;30909 20395 20395 1 SKEEAEALYHSK QYEEIAQRSKEEAEAL AEALYHSKYEELQVTV R S K S K Y 2 0 0 0 0 0 3 0 1 0 1 2 0 0 0 2 0 0 1 0 0 12 1 1390.6729 P35908;CON__P35908 P35908 363 374 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 0.0019263 85.271 By matching By matching By MS/MS By MS/MS By matching By matching 1 2 1 1 1 15672000 0 3259100 6984800 2058100 708530 2661400 + 6932 302 7032 30910;30911;30912;30913;30914;30915 20396;20397;20398 20396 3 SKEGDVEEPTDDSLPTTGDAGGREPMEEK VKQGLQERSKEGDVEE GREPMEEKLLEIQGKI R S K E K L 1 1 0 4 0 0 6 4 0 0 1 2 1 0 3 2 3 0 0 1 0 29 2 3075.3462 Q9UKN8 Q9UKN8 640 668 GTF3C4 General transcription factor 3C polypeptide 4 yes yes 4 7.7289E-13 64.035 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 16054000 0 1972000 2548300 1255900 2984300 7293800 6933 1602 7033 30916;30917;30918;30919;30920 20399;20400;20401 20400 3 SKELTTEIDNNIEQISSYK AEAWFNEKSKELTTEI IEQISSYKSEITELRR K S K Y K S 0 0 2 1 0 1 3 0 0 3 1 2 0 0 0 3 2 0 1 0 0 19 1 2211.0907 P13645;CON__P13645 P13645 344 362 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.0027365 61.087 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 + 6934 298 7034 30921 20402 20402 1 SKENCISGPVKATAPVGGPK ________________ TAPVGGPKRVLVTQQF R S K P K R 2 0 1 0 1 0 1 3 0 1 0 3 0 0 3 2 1 0 0 2 0 20 2 1996.0412 O14965;A3KFJ0;Q5QPD4;A3KFJ1;Q5QPD2;Q5QPD1;A3KFJ2 O14965 4 23 AURKA Aurora kinase A yes no 4 0.00012351 66.606 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 9715400 0 2732000 0 1266100 2107800 3609500 6935 698 7035 30922;30923;30924;30925 20403;20404;20405;20406 20403 4 SKEVINRPFTNESLQPHALGPVK SALNFAARSKEVINRP PHALGPVKLSQKELLG R S K V K L 1 1 2 0 0 1 2 1 1 1 2 2 0 1 3 2 1 0 0 2 0 23 2 2560.3762 Q14807;B7Z265;H3BRB3 Q14807 365 387 KIF22 Kinesin-like protein KIF22 yes no 4;5 2.1359E-83 121.77 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 285140000 28003000 0 41036000 3122100 23192000 189780000 6936 1115 7036 30926;30927;30928;30929;30930;30931;30932;30933;30934 20407;20408;20409;20410;20411;20412;20413;20414 20409 8 SKGPYICALCAK SALEKKTKSKGPYICA YICALCAKEFKNGYNL K S K A K E 2 0 0 0 2 0 0 1 0 1 1 2 0 0 1 1 0 0 1 0 0 12 1 1366.6737 C6G496;P56270;G5E927 C6G496 163 174 MAZ Myc-associated zinc finger protein yes no 2;3 0.00010108 92.781 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 1 2 2 3 2 160150000 27021000 12393000 15541000 42718000 26375000 36102000 6937 219 7037 30935;30936;30937;30938;30939;30940;30941;30942;30943;30944;30945;30946;30947;30948 20415;20416;20417;20418;20419;20420;20421;20422;20423;20424;20425;20426 20425 11 SKGRAEAAAGAAGILLR ________________ GAAGILLRYLQEQNRP M S K L R Y 6 2 0 0 0 0 1 3 0 1 2 1 0 0 0 1 0 0 0 0 0 17 2 1610.9216 Q9P2W1;Q9P2W1-2 Q9P2W1 2 18 PSMC3IP Homologous-pairing protein 2 homolog yes no 3 0.00011188 63.546 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 7025700 0 0 0 3494800 0 3530900 6938 1580 7038 30949;30950 20427;20428 20427 0 SKLVDEEPQLTK LAYKEHLKSKLVDEEP DEEPQLTKRTHNV___ K S K T K R 0 0 0 1 0 1 2 0 0 0 2 2 0 0 1 1 1 0 0 1 0 12 1 1385.7402 Q9UG63 Q9UG63 607 618 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 2 0.0096715 68.171 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 9163300 1183600 1174700 1183100 1650600 2395500 1575800 6939 1589 7039 30951;30952;30953;30954;30955;30956 20429;20430;20431 20430 3 SKNLEDDTLSECK GGHSIRCKSKNLEDDT DDTLSECKQVSDKAVS K S K C K Q 0 0 1 2 1 0 2 0 0 0 2 2 0 0 0 2 1 0 0 0 0 13 1 1537.693 Q14966-3;Q14966;Q14966-4;Q14966-2;C9JBI6;F5H330 Q14966-3 641 653 ZNF638 Zinc finger protein 638 yes no 3 0.033124 43.798 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2020900 0 372090 0 0 840940 807900 6940 1118 7040 30957;30958;30959 20432 20432 1 SKPGAAMVEMADGYAVDR VEKVKFMKSKPGAAMV ADGYAVDRAITHLNNN K S K D R A 4 1 0 2 0 0 1 2 0 0 0 1 2 0 1 1 0 0 1 2 0 18 1 1866.8604 P14866;A6NIT8 P14866 417 434 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 2;3 2.7803E-110 138.82 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 2 1 1 1 193220000 30555000 72475000 46637000 29601000 13951000 0 6941 838 7041 30960;30961;30962;30963;30964;30965 20433;20434;20435;20436;20437 20437 4 SKQHSSFGYGGLQGPASGLNACQYNS SLASLRLKSKQHSSFG LNACQYNS________ K S K N S - 2 0 2 0 1 3 0 5 1 0 2 1 0 1 1 5 0 0 2 0 0 26 1 2714.2143 P78337 P78337 289 314 PITX1 Pituitary homeobox 1 yes yes 3 4.091E-21 85.387 By matching By matching By matching By matching By matching By MS/MS 1 8077100 0 0 0 0 0 8077100 6942 1008 7042 30966 20438 20438 1 SKQPLPSAPENNPEEELASK RPLNNTQKSKQPLPSA PEEELASKQKNEESKK K S K S K Q 2 0 2 0 0 1 4 0 0 0 2 2 0 0 4 3 0 0 0 0 0 20 1 2164.0648 O14965;A3KFJ0;Q5QPD4;A3KFJ1;Q5QPD2 O14965 98 117 AURKA Aurora kinase A yes no 3 7.8364E-122 137.99 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 27687000 1535000 4862300 4479800 1115900 3065100 12629000 6943 698 7043 30967;30968;30969;30970;30971;30972 20439;20440;20441;20442;20443 20440 5 SKQPLPSAPENNPEEELASKQK RPLNNTQKSKQPLPSA EELASKQKNEESKKRQ K S K Q K N 2 0 2 0 0 2 4 0 0 0 2 3 0 0 4 3 0 0 0 0 0 22 2 2420.2183 O14965;A3KFJ0;Q5QPD4;A3KFJ1;Q5QPD2 O14965 98 119 AURKA Aurora kinase A yes no 3;4 7.6397E-185 150.13 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 2 2 2 2 255290000 11463000 32288000 67137000 19046000 18534000 106820000 6944 698 7044 30973;30974;30975;30976;30977;30978;30979;30980;30981;30982 20444;20445;20446;20447;20448;20449;20450;20451 20449 8 SKTDLPEEKPDATPQNPFLK PNLRPISKSKTDLPEE TPQNPFLKSRPQVRPK K S K L K S 1 0 1 2 0 1 2 0 0 0 2 3 0 1 4 1 2 0 0 0 0 20 2 2254.1481 A1X283 A1X283 618 637 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 3 0.00049583 74.618 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 7347400 0 1797000 0 0 0 5550400 6945 2 7045 30983;30984 20452;20453 20452 2 SKVEDKPFEETGVEPVLETASSSAHSTQK NDSEKQRKSKVEDKPF SSAHSTQKDSSHRAKL K S K Q K D 2 0 0 1 0 1 5 1 1 0 1 3 0 1 2 5 3 0 0 3 0 29 2 3116.515 Q8NFC6 Q8NFC6 958 986 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 4 0 162.35 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 36025000 0 3620000 6127100 19280000 1863400 5135300 6946 1325 7046 30985;30986;30987;30988;30989 20454;20455;20456;20457 20456 3 SKVEDPEINSIQDIK SRTNPETKSKVEDPEI INSIQDIKEGQLLRGY K S K I K E 0 0 1 2 0 1 2 0 0 3 0 2 0 0 1 2 0 0 0 1 0 15 1 1713.8785 Q14690 Q14690 1308 1322 PDCD11 Protein RRP5 homolog yes yes 3 0.0025212 60.489 By matching By MS/MS By matching By matching By matching By matching 1 554380 0 554380 0 0 0 0 6947 1112 7047 30990 20458 20458 1 SLAAQEPASVLEEAR AAPQIRSRSLAAQEPA ASVLEEARLRLHVSAV R S L A R L 4 1 0 0 0 1 3 0 0 0 2 0 0 0 1 2 0 0 0 1 0 15 0 1569.7999 Q13415 Q13415 478 492 ORC1 Origin recognition complex subunit 1 yes yes 2 0 199.33 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 77005000 0 35906000 0 4210800 0 36888000 6948 1080 7048 30991;30992;30993 20459;20460;20461 20460 3 SLAGSSGPGASSGTSGDHGELVVR RARENIQKSLAGSSGP DHGELVVRIASLEVEN K S L V R I 2 1 0 1 0 0 1 6 1 0 2 0 0 0 1 6 1 0 0 2 0 24 0 2184.0407 E9PK01;P29692;E9PMW7;E9PPR1;E9PL12;E9PQ49;E9PI39;P29692-2;E9PRY8;E9PIZ1;H0YCK7 E9PK01 60 83 EEF1D Elongation factor 1-delta yes no 3 0.0032927 44.341 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4569100 0 1180100 0 759120 1746800 883020 6949 451 7049 30994;30995;30996;30997 20462 20462 1 SLAPAPLSTK SYNNWAAKSLAPAPLS APAPLSTKSFTFFNSM K S L T K S 2 0 0 0 0 0 0 0 0 0 2 1 0 0 2 2 1 0 0 0 0 10 0 983.56515 P78337 P78337 188 197 PITX1 Pituitary homeobox 1 yes yes 2 0.0087186 79.659 By MS/MS By matching By MS/MS By matching By matching By MS/MS 2 1 1 1 1 72249000 9886800 0 19997000 7063900 11532000 23768000 6950 1008 7050 30998;30999;31000;31001;31002;31003 20463;20464;20465;20466 20464 4 SLAPEPKEPLIPASPK CVLLRAQRSLAPEPKE PLIPASPKAEPIWELP R S L P K A 2 0 0 0 0 0 2 0 0 1 2 2 0 0 5 2 0 0 0 0 0 16 1 1672.94 Q9Y613;B4DVN5 Q9Y613 510 525 FHOD1 FH1/FH2 domain-containing protein 1 yes no 3 0.00041595 76.82 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 5941000 4160700 921350 0 859010 0 0 6951 1659 7051 31004;31005;31006 20467;20468 20468 2 SLAPSIHGHDYVK DIFDQLAKSLAPSIHG IHGHDYVKKAILCLLL K S L V K K 1 0 0 1 0 0 0 1 2 1 1 1 0 0 1 2 0 0 1 1 0 13 0 1422.7256 P25205 P25205 302 314 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.0022317 70.089 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 7344000 588870 1173100 2298800 0 2514600 768630 6952 873 7052 31007;31008;31009;31010;31011 20469;20470;20471 20471 3 SLAPSIHGHDYVKK DIFDQLAKSLAPSIHG HGHDYVKKAILCLLLG K S L K K A 1 0 0 1 0 0 0 1 2 1 1 2 0 0 1 2 0 0 1 1 0 14 1 1550.8205 P25205 P25205 302 315 MCM3 DNA replication licensing factor MCM3 yes yes 3 0.00019181 88.101 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 23218000 0 2730000 4509500 2188400 4724100 9065800 6953 873 7053 31012;31013;31014;31015;31016 20472;20473 20473 2 SLAVSGLGVIGRDR LTEGDSAKSLAVSGLG LGVIGRDRYGVFPLRG K S L D R Y 1 2 0 1 0 0 0 3 0 1 2 0 0 0 0 2 0 0 0 2 0 14 1 1398.7943 Q02880-2;Q02880;E9PCY5 Q02880-2 483 496 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 3 2.2729E-21 103.44 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 0 0 0 0 0 0 0 6954 1035 7054 31017;31018 20474;20475 20474 2 SLDFKEQVAEETSGDSK KETDVFWKSLDFKEQV EETSGDSKARNLADDS K S L S K A 1 0 0 2 0 1 3 1 0 0 1 2 0 1 0 3 1 0 0 1 0 17 1 1868.864 P35251-2;P35251 P35251-2 552 568 RFC1 Replication factor C subunit 1 yes no 3 0.0020692 55.688 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 6757800 0 3638200 1102300 691750 1325500 0 6955 896 7055 31019;31020;31021;31022 20476 20476 1 SLDFPQNEPQIK KEQAPKTRSLDFPQNE PQNEPQIKNQFNKKLS R S L I K N 0 0 1 1 0 2 1 0 0 1 1 1 0 1 2 1 0 0 0 0 0 12 0 1414.7092 Q8NEF9 Q8NEF9 367 378 SRFBP1 Serum response factor-binding protein 1 yes yes 2 0.032076 46.88 By matching By matching By matching By matching By matching By MS/MS 1 3281400 0 0 0 0 0 3281400 6956 1322 7056 31023 20477 20477 1 SLDFPQNEPQIKNQFNK KEQAPKTRSLDFPQNE QIKNQFNKKLSGRLEN R S L N K K 0 0 3 1 0 3 1 0 0 1 1 2 0 2 2 1 0 0 0 0 0 17 1 2046.0171 Q8NEF9 Q8NEF9 367 383 SRFBP1 Serum response factor-binding protein 1 yes yes 3 0.0033993 50.874 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 36406000 21576000 0 0 14830000 0 0 6957 1322 7057 31024;31025 20478;20479 20478 2 SLDHQAVNFKQNDTK QYEKAYLKSLDHQAVN NFKQNDTKALRSKSLL K S L T K A 1 0 2 2 0 2 0 0 1 0 1 2 0 1 0 1 1 0 0 1 0 15 1 1743.854 O75182-2;O75182 O75182-2 571 585 SIN3B Paired amphipathic helix protein Sin3b yes no 4 0.0008042 76.156 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 16448000 0 3214000 4617000 2741200 0 5875800 6958 738 7058 31026;31027;31028;31029 20480;20481 20480 2 SLDHQGINFKQNDTK QNEKYYLKSLDHQGIN NFKQNDTKVLRSKSLL K S L T K V 0 0 2 2 0 2 0 1 1 1 1 2 0 1 0 1 1 0 0 0 0 15 1 1743.854 Q96ST3 Q96ST3 728 742 SIN3A Paired amphipathic helix protein Sin3a yes yes 3;4 2.6835E-31 118.52 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 3 1 1 1 2 1 23347000 4795400 2802000 2676500 2430200 6601000 4042000 6959 1420 7059 31030;31031;31032;31033;31034;31035;31036;31037;31038 20482;20483;20484;20485;20486;20487;20488;20489 20489 8 SLDITTSTTAYFPPGATLNNKEK ATQDNLCKSLDITTST ATLNNKEKNSILFLNS K S L E K N 2 0 2 1 0 0 1 1 0 1 2 2 0 1 2 2 5 0 1 0 0 23 1 2468.2435 Q8IXB1;Q3B7W8;H7C1G0 Q8IXB1 303 325 DNAJC10 DnaJ homolog subfamily C member 10 yes no 3 1.547E-07 64.538 By matching By MS/MS By matching By matching By matching By matching 1 50101000 0 50101000 0 0 0 0 6960 1287 7060 31039 20490 20490 1 SLDPADER LRLNLLKRSLDPADER SLDPADERDDVLAKRL R S L E R D 1 1 0 2 0 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 8 0 901.41412 Q8WXI9 Q8WXI9 17 24 GATAD2B Transcriptional repressor p66-beta yes yes 2 0.02381 76.679 By matching By matching By matching By matching By matching By MS/MS 1 1969300 0 0 0 0 0 1969300 6961 1344 7061 31040 20491;20492 20491 2 SLDPADERDDVLAK LRLNLLKRSLDPADER ERDDVLAKRLKMEGHE R S L A K R 2 1 0 4 0 0 1 0 0 0 2 1 0 0 1 1 0 0 0 1 0 14 1 1542.7526 Q8WXI9 Q8WXI9 17 30 GATAD2B Transcriptional repressor p66-beta yes yes 2;3 1.3632E-55 130.47 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 2 1 1 1 132800000 1678600 36938000 49834000 2004800 446170 41899000 6962 1344 7062 31041;31042;31043;31044;31045;31046;31047;31048 20493;20494;20495;20496;20497;20498;20499 20499 7 SLDQCVETLQK AVVLPRGKSLDQCVET QCVETLQKQTRVGKAG K S L Q K Q 0 0 0 1 1 2 1 0 0 0 2 1 0 0 0 1 1 0 0 1 0 11 0 1319.6391 Q8N5A5-3;Q8N5A5-2;Q8N5A5 Q8N5A5-3 344 354 ZGPAT Zinc finger CCCH-type with G patch domain-containing protein yes no 2 0.0017121 90.614 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 10021000 1256900 1289100 1935000 1500000 1641000 2398900 6963 1301 7063 31049;31050;31051;31052;31053;31054 20500;20501;20502 20501 3 SLDYVAQLRDHGK KAYELSQRSLDYVAQL AQLRDHGKTVGVVDTR R S L G K T 1 1 0 2 0 1 0 1 1 0 2 1 0 0 0 1 0 0 1 1 0 13 1 1500.7685 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 1303 1315 SETX Probable helicase senataxin yes no 3 0.0052466 61.11 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 11000000 1698300 2624700 2203400 869320 0 3604700 6964 1250 7064 31055;31056;31057;31058;31059 20503;20504;20505;20506;20507 20505 5 SLEAHMYPEKLK MMLEEQVRSLEAHMYP HMYPEKLKVIAQQVQL R S L L K V 1 0 0 0 0 0 2 0 1 0 2 2 1 0 1 1 0 0 1 0 0 12 1 1444.7384 Q01664 Q01664 178 189 TFAP4 Transcription factor AP-4 yes yes 3 0.026573 49.28 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 14034000 0 2590400 1246200 781370 1376200 8039900 6965 1029 7065 31060;31061;31062;31063;31064 20508;20509 20508 2 SLEAQVAHADQQLR RHLTAQVRSLEAQVAH AHADQQLRDLGKFQVA R S L L R D 3 1 0 1 0 3 1 0 1 0 2 0 0 0 0 1 0 0 0 1 0 14 0 1564.7958 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9;H0YH75 Q14980-2 1668 1681 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2;3 0.0011059 79.614 By MS/MS By matching By matching By matching By MS/MS By MS/MS 2 2 2 2 1 14900000 3339100 4440200 1448600 0 3855800 1816000 6966 1121 7066 31065;31066;31067;31068;31069;31070;31071;31072;31073 20510;20511;20512;20513;20514;20515 20510 6 SLEAQVAHADQQLRDLGK RHLTAQVRSLEAQVAH QQLRDLGKFQVATDAL R S L G K F 3 1 0 2 0 3 1 1 1 0 3 1 0 0 0 1 0 0 0 1 0 18 1 1978.0232 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9;H0YH75 Q14980-2 1668 1685 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 3.7055E-45 116 By matching By MS/MS By matching By matching By matching By matching 1 24823000 0 24823000 0 0 0 0 6967 1121 7067 31074 20516;20517 20517 2 SLEDPYSQQIR PRTTIFVKSLEDPYSQ DPYSQQIRLQQQQAQQ K S L I R L 0 1 0 1 0 2 1 0 0 1 1 0 0 0 1 2 0 0 1 0 0 11 0 1334.6466 Q9NVH2-4;Q9NVH2-3;Q9NVH2-2;Q9NVH2 Q9NVH2-4 881 891 INTS7 Integrator complex subunit 7 yes no 2 0.0053498 72.531 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2897600 0 730700 229950 0 0 1936900 6968 1548 7068 31075;31076;31077 20518 20518 1 SLEHKTQTPPVEENVTQK EQHKCSSKSLEHKTQT VEENVTQKISDLEICA K S L Q K I 0 0 1 0 0 2 3 0 1 0 1 2 0 0 2 1 3 0 0 2 0 18 1 2064.0487 H7C4Z8;Q6P1Q9-2;Q6P1Q9 H7C4Z8 141 158 METTL2B Methyltransferase-like protein 2B yes no 3 0.0019462 53.504 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 4487400 0 1019100 784920 371230 922220 1389900 6969 673 7069 31078;31079;31080;31081;31082 20519;20520;20521;20522 20522 4 SLEHSGSLDDPNRISLVK DSSVVYAKSLEHSGSL PNRISLVKRNAVLPSK K S L V K R 0 1 1 2 0 0 1 1 1 1 3 1 0 0 1 4 0 0 0 1 0 18 1 1966.012 Q9ULJ3-2;Q9ULJ3 Q9ULJ3-2 219 236 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes no 3;4 0.0016013 66.436 By MS/MS By matching By MS/MS By matching By matching By MS/MS 3 2 2 25579000 6970800 0 12809000 0 0 5798900 6970 1607 7070 31083;31084;31085;31086;31087;31088;31089 20523;20524;20525;20526;20527;20528 20525 6 SLENLNSGTVEPTHSK DLEMEMLKSLENLNSG TVEPTHSKCLKMERNL K S L S K C 0 0 2 0 0 0 2 1 1 0 2 1 0 0 1 3 2 0 0 1 0 16 0 1711.8377 Q14191 Q14191 478 493 WRN Werner syndrome ATP-dependent helicase yes yes 3 0.0012014 75.998 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 5124500 561070 1052400 0 535370 990660 1985000 6971 1100 7071 31090;31091;31092;31093;31094 20529;20530 20530 2 SLESINSR VAAKKTKKSLESINSR SLESINSRLQLVMKSG K S L S R L 0 1 1 0 0 0 1 0 0 1 1 0 0 0 0 3 0 0 0 0 0 8 0 904.46141 E5RI99;P62888;E5RJH3 E5RI99 10 17 RPL30 60S ribosomal protein L30 yes no 2 0.0065709 106.68 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 18604000 0 4610600 7139200 0 6854000 0 6972 342 7072 31095;31096;31097 20531;20532 20532 2 SLESINSRLQLVMK VAAKKTKKSLESINSR SRLQLVMKSGKYVLGY K S L M K S 0 1 1 0 0 1 1 0 0 1 3 1 1 0 0 3 0 0 0 1 0 14 1 1616.892 E5RI99;P62888;E5RJH3 E5RI99 10 23 RPL30 60S ribosomal protein L30 yes no 2;3 1.6497E-123 151.22 By MS/MS By MS/MS By matching By MS/MS By matching By matching 2 2 5 659520000 231470000 21751000 0 406300000 0 0 6973 342 7073;7074 31098;31099;31100;31101;31102;31103;31104;31105;31106 20533;20534;20535;20536;20537;20538;20539;20540 20533 32 8 SLESQVENLQK NQAETKSKSLESQVEN SQVENLQKTLSEKETE K S L Q K T 0 0 1 0 0 2 2 0 0 0 2 1 0 0 0 2 0 0 0 1 0 11 0 1273.6514 P12270 P12270 1492 1502 TPR Nucleoprotein TPR yes yes 2 3.1362E-127 160.91 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 12816000 6495800 2374900 0 850140 0 3095500 6974 827 7075 31107;31108;31109;31110 20541;20542;20543;20544 20544 3 SLESSQTDLK ________________ ESSQTDLKLVAHPRAK K S L L K L 0 0 0 1 0 1 1 0 0 0 2 1 0 0 0 3 1 0 0 0 0 10 0 1106.5455 O96006;C9JXP4 O96006 5 14 ZBED1 Zinc finger BED domain-containing protein 1 yes no 2 0.0028559 95.523 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 10052000 488120 1424400 2540700 454140 1180000 3964500 6975 778 7076 31111;31112;31113;31114;31115;31116 20545;20546 20546 2 SLESSQTDLKLVAHPR ________________ LKLVAHPRAKSKVWKY K S L P R A 1 1 0 1 0 1 1 0 1 0 3 1 0 0 1 3 1 0 0 1 0 16 1 1779.9479 O96006;C9JXP4 O96006 5 20 ZBED1 Zinc finger BED domain-containing protein 1 yes no 3 0.0032766 66.246 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 15975000 0 0 5333300 2172400 307740 8161000 6976 778 7077 31117;31118;31119;31120 20547 20547 1 SLESSQTDLKLVAHPRAK ________________ LVAHPRAKSKVWKYFG K S L A K S 2 1 0 1 0 1 1 0 1 0 3 2 0 0 1 3 1 0 0 1 0 18 2 1979.08 O96006;C9JXP4 O96006 5 22 ZBED1 Zinc finger BED domain-containing protein 1 yes no 3 0.034293 41.323 By matching By matching By MS/MS By matching By matching By matching 1 1 1895500 0 571150 1324400 0 0 0 6977 778 7078 31121;31122 20548 20548 1 SLESTTLTEK FRCAKCGKSLESTTLT ESTTLTEKEGEIYCKG K S L E K E 0 0 0 0 0 0 2 0 0 0 2 1 0 0 0 2 3 0 0 0 0 10 0 1107.5659 Q16527;F8VW96;F8VQR7 Q16527 152 161 CSRP2 Cysteine and glycine-rich protein 2 yes no 2 0.002987 93.561 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 245430000 32282000 39196000 63661000 13855000 25783000 70651000 6978 1152 7079 31123;31124;31125;31126;31127;31128;31129 20549;20550;20551;20552;20553;20554 20549 6 SLETEITNGINLNSDTAEHPGTRLQTHRK ENSTKEERSLETEITN TRLQTHRKTVVTPLDM R S L R K T 1 2 3 1 0 1 3 2 2 2 3 1 0 0 1 2 5 0 0 0 0 29 2 3231.6232 Q92547 Q92547 747 775 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 4;5 0.00016772 42.042 By matching By matching By matching By MS/MS By matching By matching 2 9783500 0 0 0 9783500 0 0 6979 1351 7080 31130;31131 20555;20556 20555 2 SLETENAGLR AVYIDRVRSLETENAG ETENAGLRLRITESEE R S L L R L 1 1 1 0 0 0 2 1 0 0 2 0 0 0 0 1 1 0 0 0 0 10 0 1088.5462 P02545;P02545-3;Q6UYC3;P02545-2;Q3BDU5;Q5TCJ4 P02545 51 60 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.0029794 93.667 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 11680000 2413400 2790700 1435900 920720 1892200 2227200 6980 783 7081 31132;31133;31134;31135;31136;31137;31138 20557;20558;20559;20560;20561 20560 5 SLETSSALSPSLKNK SRIAGLSKSLETSSAL LSPSLKNKSKGIQSIL K S L N K S 1 0 1 0 0 0 1 0 0 0 3 2 0 0 1 5 1 0 0 0 0 15 1 1560.8359 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 1613 1627 SETX Probable helicase senataxin yes no 2;3 0.0029804 58.079 By matching By matching By matching By matching By matching By MS/MS 2 1 1 2 7222200 1439500 0 1309300 701390 0 3772100 6981 1250 7082 31139;31140;31141;31142;31143;31144 20562;20563 20563 2 SLEYCSTASIDSENPPDLNK YNHLAEWKSLEYCSTA ENPPDLNKIWSEPFYQ K S L N K I 1 0 2 2 1 0 2 0 0 1 2 1 0 0 2 4 1 0 1 0 0 20 0 2238.9951 P78527;E7EUY0;P78527-2 P78527 3010 3029 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2;3 0 191.64 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 1 97396000 0 64139000 0 7279500 0 25978000 6982 1012 7083 31145;31146;31147;31148 20564;20565;20566 20564 3 SLFIHENNEK HRSPERRKSLFIHENN FIHENNEKNDRDRGKT K S L E K N 0 0 2 0 0 0 2 0 1 1 1 1 0 1 0 1 0 0 0 0 0 10 0 1229.6041 B1AL16;Q8IX21;B1AL17 B1AL16 176 185 FAM178A Protein FAM178A yes no 2;3 0.010204 79.07 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 4039800 882120 0 541860 863710 994000 758170 6983 63 7084 31149;31150;31151;31152;31153;31154 20567;20568;20569;20570 20570 4 SLFTTHSSAK SEESEAYKSLFTTHSS FTTHSSAKRSKEESAH K S L A K R 1 0 0 0 0 0 0 0 1 0 1 1 0 1 0 3 2 0 0 0 0 10 0 1077.5455 Q9BY42;A8MSH5 Q9BY42 280 289 RTFDC1 Protein RTF2 homolog yes no 2 0.0057609 86.344 By matching By matching By MS/MS By matching By matching By matching 1 1 1 9919600 0 2972600 6658600 0 288430 0 6984 38 7085 31155;31156;31157 20571 20571 1 SLGKAPASLPTEEK AKSGQSFRSLGKAPAS ASLPTEEKKLVTTEQS R S L E K K 2 0 0 0 0 0 2 1 0 0 2 2 0 0 2 2 1 0 0 0 0 14 1 1426.7668 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 2333 2346 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 3 1.5112E-29 113.53 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 15726000 1656400 2821100 3192100 804790 2618000 4633900 6985 1404 7086 31158;31159;31160;31161;31162;31163 20572;20573;20574;20575;20576 20572 5 SLGNILQAKPTSSPAKGPPQK AVAPAQEKSLGNILQA PAKGPPQKAGPVAVQV K S L Q K A 2 0 1 0 0 2 0 2 0 1 2 3 0 0 4 3 1 0 0 0 0 21 2 2118.1797 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 571 591 TCOF1 Treacle protein no no 3;4 2.7904E-58 113.54 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 3 2 2 119580000 34915000 16497000 26288000 14123000 6435000 21323000 6986 1082;383 7087 31164;31165;31166;31167;31168;31169;31170;31171;31172;31173;31174;31175;31176 20577;20578;20579;20580;20581;20582;20583;20584;20585 20581 8 SLGPPQGEEDSVPR ALVKHMHRSLGPPQGE GEEDSVPRDLPSWMKF R S L P R D 0 1 0 1 0 1 2 2 0 0 1 0 0 0 3 2 0 0 0 1 0 14 0 1466.7001 P78527;E7EUY0;P78527-2 P78527 2107 2120 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.005758 55.415 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 18088000 2000700 0 761450 891310 4490200 9944400 6987 1012 7088 31177;31178;31179;31180;31181 20586;20587;20588;20589 20587 3 SLGSVQAPSYGARPVSSAASVYAGAGGSGSR STFSTNYRSLGSVQAP GAGGSGSRISVSRSTS R S L S R I 6 2 0 0 0 1 0 6 0 0 1 0 0 0 2 8 0 0 2 3 0 31 1 2853.4005 F8VZY9;P05783 F8VZY9 15 45 KRT18 Keratin, type I cytoskeletal 18 yes no 3 1.645E-32 80.355 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 14258000 0 9541600 0 0 0 4716300 6988 549 7089 31182;31183 20590;20591 20591 2 SLGTADVHFER VHYDRSGRSLGTADVH TADVHFERKADALKAM R S L E R K 1 1 0 1 0 0 1 1 1 0 1 0 0 1 0 1 1 0 0 1 0 11 0 1230.5993 Q86V81;E9PB61 Q86V81 145 155 ALYREF THO complex subunit 4 yes no 3 0.0044911 72.34 By matching By MS/MS By matching By matching By matching By matching 1 1 5274800 0 1834100 0 0 3440700 0 6989 402 7090 31184;31185 20592 20592 1 SLGTADVHFERK VHYDRSGRSLGTADVH ADVHFERKADALKAMK R S L R K A 1 1 0 1 0 0 1 1 1 0 1 1 0 1 0 1 1 0 0 1 0 12 1 1358.6943 Q86V81;E9PB61 Q86V81 145 156 ALYREF THO complex subunit 4 yes no 3 0.00092415 86.463 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 33326000 4940600 3930000 2679000 1811500 9310700 10654000 6990 402 7091 31186;31187;31188;31189;31190;31191;31192 20593;20594;20595;20596;20597;20598 20593 6 SLGTIQQCCDAIDHLCR ALAHADEKSLGTIQQC DAIDHLCRIIEKKHVS K S L C R I 1 1 0 2 3 2 0 1 1 2 2 0 0 0 0 1 1 0 0 0 0 17 0 2045.9081 P78527;E7EUY0;P78527-2 P78527 1120 1136 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 0 200.97 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 412130000 54748000 83661000 44053000 48479000 32092000 149090000 6991 1012 7092 31193;31194;31195;31196;31197;31198;31199 20599;20600;20601;20602;20603;20604 20599 6 SLGVDMDDK TVLEKEMRSLGVDMDD LGVDMDDKDDAHYAVQ R S L D K D 0 0 0 3 0 0 0 1 0 0 1 1 1 0 0 1 0 0 0 1 0 9 0 978.43281 Q9BZE4;B7Z7A3;B4DY13 Q9BZE4 526 534 GTPBP4 Nucleolar GTP-binding protein 1 yes no 2 0.036082 61.78 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 4621600 643630 1007000 0 686260 1217400 1067200 6992 1471 7093 31200;31201;31202;31203;31204 20605;20606 20606 2 SLGVDMDDKDDAHYAVQAR TVLEKEMRSLGVDMDD AHYAVQARRSRSITRK R S L A R R 3 1 0 5 0 1 0 1 1 0 1 1 1 0 0 1 0 0 1 2 0 19 1 2104.9484 Q9BZE4;B7Z7A3;B4DY13 Q9BZE4 526 544 GTPBP4 Nucleolar GTP-binding protein 1 yes no 3 0.00038886 67.902 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1911900 0 387370 446600 0 0 1078000 6993 1471 7094 31205;31206;31207 20607 20607 1 SLGYGSRSCYSVGCGSSGVR GFGSSSCRSLGYGSRS GCGSSGVRSLGYGSCG R S L V R S 0 2 0 0 2 0 0 5 0 0 1 0 0 0 0 6 0 0 2 2 0 20 1 2094.9211 Q52LG2 Q52LG2 109 128 KRTAP13-2 Keratin-associated protein 13-2 yes yes 3 0.0027388 48.919 By matching By matching By matching By MS/MS By matching By matching 1 608280 0 0 0 608280 0 0 6994 1173 7095 31208 20608 20608 1 SLHLSPQEQSASYQDRR HQERLQSKSLHLSPQE SASYQDRRQSWRRASM K S L R R Q 1 2 0 1 0 3 1 0 1 0 2 0 0 0 1 4 0 0 1 0 0 17 1 2000.9664 Q9H410;B4DWT2;Q5JW53;Q5JW58 Q9H410 77 93 DSN1 Kinetochore-associated protein DSN1 homolog yes no 4 0.0020899 49.595 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 7538100 1034300 0 0 972420 3107000 2424400 6995 1488 7096 31209;31210;31211;31212 20609 20609 1 SLHPIHQGITELSR MKETNRRKSLHPIHQG QGITELSRSISVDLAE K S L S R S 0 1 0 0 0 1 1 1 2 2 2 0 0 0 1 2 1 0 0 0 0 14 0 1586.8529 Q9H410;B4DWT2;Q5JW53;Q5JW54;Q9H410-2;Q5JW58;Q5JW57 Q9H410 109 122 DSN1 Kinetochore-associated protein DSN1 homolog yes no 3 8.4479E-08 97.203 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 8588300 1151700 901520 981740 0 2732800 2820500 6996 1488 7097 31213;31214;31215;31216;31217 20610;20611;20612 20612 3 SLHTLFGDELCK ESHAGCEKSLHTLFGD LFGDELCKVASLRETY K S L C K V 0 0 0 1 1 0 1 1 1 0 3 1 0 1 0 1 1 0 0 0 0 12 0 1418.6864 CON__P02769 CON__P02769 89 100 yes yes 2;3 0 222.2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 10 2 10237000000 1339300000 2581400000 1162400000 3776800000 535400000 841900000 + 6997 294 7098 31218;31219;31220;31221;31222;31223;31224;31225;31226;31227;31228;31229;31230;31231;31232;31233;31234;31235;31236;31237;31238;31239 20613;20614;20615;20616;20617;20618;20619;20620;20621;20622;20623;20624;20625;20626;20627;20628;20629;20630;20631;20632 20613 19 SLIERYGGK SIERDEAKSLIERYGG LIERYGGKVTGNVSKK K S L G K V 0 1 0 0 0 0 1 2 0 1 1 1 0 0 0 1 0 0 1 0 0 9 1 1021.5556 P35251-2;P35251;H0Y8U4 P35251-2 428 436 RFC1 Replication factor C subunit 1 yes no 2 0.015038 94.85 By matching By matching By matching By MS/MS By matching By matching 1 1 1478000 0 0 0 652060 0 825900 6998 896 7099 31240;31241 20633 20633 1 SLIGLKNTENNDVEISETK EKSQPQEKSLIGLKNT DVEISETKKADVQAPV K S L T K K 0 0 3 1 0 0 3 1 0 2 2 2 0 0 0 2 2 0 0 1 0 19 1 2103.0695 Q5UIP0-2;Q5UIP0;H7C2B5 Q5UIP0-2 1745 1763 RIF1 Telomere-associated protein RIF1 yes no 3 2.7092E-17 98.169 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 11785000 128110 3479000 0 0 0 8178200 6999 1201 7100 31242;31243;31244 20634;20635;20636 20635 3 SLIGLKNTENNDVEISETKK EKSQPQEKSLIGLKNT VEISETKKADVQAPVS K S L K K A 0 0 3 1 0 0 3 1 0 2 2 3 0 0 0 2 2 0 0 1 0 20 2 2231.1645 Q5UIP0-2;Q5UIP0;H7C2B5 Q5UIP0-2 1745 1764 RIF1 Telomere-associated protein RIF1 yes no 3 0.021432 43.696 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1890400 0 331180 700430 0 0 858790 7000 1201 7101 31245;31246;31247 20637 20637 1 SLKAPGARGPGPEGGGGGSYFSGQGSDTGASLK VNLADPYRSLKAPGAR SDTGASLKLASSELER R S L L K L 3 1 0 1 0 1 1 11 0 0 2 2 0 1 3 5 1 0 1 0 0 33 2 3006.4431 P17275 P17275 49 81 JUNB Transcription factor jun-B yes yes 4 0.020908 23.206 By matching By matching By matching By matching By MS/MS By matching 1 2375700 0 0 0 0 2375700 0 7001 848 7102 31248 20638 20638 1 SLKQTPHSEIIFYK DFVDKAEKSLKQTPHS HSEIIFYKNGVNQGVA K S L Y K N 0 0 0 0 0 1 1 0 1 2 1 2 0 1 1 2 1 0 1 0 0 14 1 1689.909 F5H8F7;Q9UBL3-3;Q9UBL3;H0YBF6 F5H8F7 393 406 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes no 3 0.0060023 55.196 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 8402900 0 1296200 1463000 601140 2219700 2823000 7002 530 7103 31249;31250;31251;31252;31253 20639 20639 1 SLKSPSDTLDGRNENLQESEILSQPK KEQNQTEKSLKSPSDT SEILSQPKSLSLEATS K S L P K S 0 1 2 2 0 2 3 1 0 1 4 2 0 0 2 5 1 0 0 0 0 26 2 2884.4414 Q86YC2 Q86YC2 354 379 PALB2 Partner and localizer of BRCA2 yes yes 4 0.0011946 50.158 By matching By matching By MS/MS By matching By matching By matching 1 5005800 0 0 5005800 0 0 0 7003 1274 7104 31254 20640;20641 20640 2 SLKVTSDPKVEQK TLFLEEDKSLKVTSDP SDPKVEQKIEVIREIE K S L Q K I 0 0 0 1 0 1 1 0 0 0 1 3 0 0 1 2 1 0 0 2 0 13 2 1457.809 Q9NQW6 Q9NQW6 531 543 ANLN Actin-binding protein anillin yes yes 3 0.0069696 68.171 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 5264800 919340 921270 1771800 1149100 503310 0 7004 1533 7105 31255;31256;31257;31258;31259 20642;20643 20643 2 SLLALKECIR MEGAEINKSLLALKEC LALKECIRALGQNKAH K S L I R A 1 1 0 0 1 0 1 0 0 1 3 1 0 0 0 1 0 0 0 0 0 10 1 1201.6853 B7Z6Q6;Q99661;Q99661-2;B7Z7M6;O00139-1;E9PB70;O00139;O00139-4;O00139-2 B7Z6Q6 478 487 KIF2C;KIF2A Kinesin-like protein KIF2C;Kinesin-like protein KIF2A no no 2;3 6.4486E-61 145.28 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 2 113290000 0 260980 0 4963500 0 108070000 7005 193;403;686 7106 31260;31261;31262;31263 20644;20645;20646 20645 3 SLLEGEGSSGGGGR ENEIQTYRSLLEGEGS GSSGGGGRGGGSFGGG R S L G R G 0 1 0 0 0 0 2 6 0 0 2 0 0 0 0 3 0 0 0 0 0 14 0 1261.5899 P13645;CON__P13645 P13645 451 464 KRT10 Keratin, type I cytoskeletal 10 yes no 2 0.024678 43.316 By matching By matching By matching By MS/MS By matching By matching 1 1 1225900 0 612870 0 612990 0 0 + 7006 298 7107 31264;31265 20647 20647 1 SLLESTYQRK QLNTQNSRSLLESTYQ LESTYQRKAEQLMSDE R S L R K A 0 1 0 0 0 1 1 0 0 0 2 1 0 0 0 2 1 0 1 0 0 10 1 1223.651 Q96ST3 Q96ST3 1044 1053 SIN3A Paired amphipathic helix protein Sin3a yes yes 3 0.013991 58.592 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4130900 0 1001500 0 0 833360 2296100 7007 1420 7108 31266;31267;31268 20648 20648 1 SLLFNAR PLPATTTKSLLFNARI KSLLFNARIAEEVNCL K S L A R I 1 1 1 0 0 0 0 0 0 0 2 0 0 1 0 1 0 0 0 0 0 7 0 819.46029 Q6KC79-2;Q6KC79;Q6KC79-3 Q6KC79-2 39 45 NIPBL Nipped-B-like protein yes no 2 0.00090981 97.473 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 7927700 808770 1676300 1835400 585820 0 3021400 7008 1222 7109 31269;31270;31271;31272;31273 20649;20650 20650 1 SLLLKPHQREK FAGKIVPKSLLLKPHQ LKPHQREKMSMEISIH K S L E K M 0 1 0 0 0 1 1 0 1 0 3 2 0 0 1 1 0 0 0 0 0 11 2 1347.7987 P53350;I3L387;Q58A51 P53350 87 97 PLK1;Plk-1 delta Serine/threonine-protein kinase PLK1 yes no 3 0.01692 72.2 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 6855400 0 1894400 3880400 547850 0 532720 7009 962 7110 31274;31275;31276;31277 20651;20652 20651 2 SLLNKPK ________________ MSLLNKPKSEMTPEEL M S L P K S 0 0 1 0 0 0 0 0 0 0 2 2 0 0 1 1 0 0 0 0 0 7 1 798.49634 P62316 P62316 2 8 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 2 4.2558E-08 124.59 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 38854000 3694000 7707400 4216200 2330000 6106400 14800000 7010 990 7111 31278;31279;31280;31281;31282;31283 20653;20654;20655;20656;20657;20658 20654 6 SLLNKPKSEMTPEELQK ________________ MTPEELQKREEEEFNT M S L Q K R 0 0 1 0 0 1 3 0 0 0 3 3 1 0 2 2 1 0 0 0 0 17 2 1971.0347 P62316 P62316 2 18 SNRPD2 Small nuclear ribonucleoprotein Sm D2 yes yes 3 0.0056232 46.892 By matching By matching By matching By MS/MS By matching By matching 1 1 5217800 0 4291800 0 926000 0 0 7011 990 7112 31284;31285 20659 20659 1 SLLNQCIEER LSGLGDRKSLLNQCIE LNQCIEERYKAVCHAA K S L E R Y 0 1 1 0 1 1 2 0 0 1 2 0 0 0 0 1 0 0 0 0 0 10 0 1260.6132 Q96GM8 Q96GM8 75 84 TOE1 Target of EGR1 protein 1 yes yes 2 0.0013635 104.07 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 18342000 0 3239800 1874800 874560 2252200 10101000 7012 1389 7113 31286;31287;31288;31289;31290 20660;20661;20662;20663 20662 4 SLLQEAQNNLK QRMHFALKSLLQEAQN QEAQNNLKIFKNGELI K S L L K I 1 0 2 0 0 2 1 0 0 0 3 1 0 0 0 1 0 0 0 0 0 11 0 1256.6725 Q9H8X2 Q9H8X2 199 209 IPPK Inositol-pentakisphosphate 2-kinase yes yes 2 5.1166E-70 147.62 By matching By MS/MS By matching By matching By matching By matching 1 1 8093400 0 4738600 0 3354800 0 0 7013 1503 7114 31291;31292 20664 20664 1 SLLSLPEKEDK DFGVRIYKSLLSLPEK SLPEKEDKKEKDKKSK K S L D K K 0 0 0 1 0 0 2 0 0 0 3 2 0 0 1 2 0 0 0 0 0 11 1 1257.6816 Q8IX12-2;Q8IX12;F5H1H2 Q8IX12-2 774 784 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes no 2;3 0.0085261 71.153 By matching By matching By matching By matching By matching By MS/MS 2 2 2 2 5157100 0 527970 0 743740 787390 3098000 7014 1285 7115 31293;31294;31295;31296;31297;31298;31299;31300 20665;20666 20665 2 SLLTTQCGVISEHTK TLGPEELRSLLTTQCG GVISEHTKKMCTRSLR R S L T K K 0 0 0 0 1 1 1 1 1 1 2 1 0 0 0 2 3 0 0 1 0 15 0 1672.8454 Q14CW9;Q14CW9-2 Q14CW9 203 217 ATXN7L3 Ataxin-7-like protein 3 yes no 3 0.0021755 62.69 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 3980000 1183600 934420 1176400 0 685560 0 7015 1123 7116 31301;31302;31303;31304 20667;20668 20667 2 SLPASHRSSTEAGGEVQTSK GSPTEKQRSLPASHRS GGEVQTSKKSYVCPNC R S L S K K 2 1 0 0 0 1 2 2 1 0 1 1 0 0 1 5 2 0 0 1 0 20 1 2027.9872 Q96IT1;Q96IT1-2 Q96IT1 384 403 ZNF496 Zinc finger protein 496 yes no 4 0.0069983 43.848 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1167300 0 501550 444070 0 221690 0 7016 1397 7117 31305;31306;31307 20669 20669 1 SLPDTELMK MSDLTDLKSLPDTELM LPDTELMKDTARGQNL K S L M K D 0 0 0 1 0 0 1 0 0 0 2 1 1 0 1 1 1 0 0 0 0 9 0 1032.5161 P46013;F5H4V4;P46013-2 P46013 969 977 MKI67 Antigen KI-67 no no 2 0.0059201 94.309 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 71069000 8950000 14262000 11178000 5521800 7705900 23452000 7017 919;920 7118 31308;31309;31310;31311;31312;31313 20670;20671;20672;20673;20674 20674 5 SLPGQNEDLVLTGYQVDKNK YMHLKVFKSLPGQNED GYQVDKNKDDELTGF_ K S L N K D 0 0 2 2 0 2 1 2 0 0 3 2 0 0 1 1 1 0 1 2 0 20 1 2217.1277 P01040 P01040 72 91 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes yes 3 0.0017777 51.524 By matching By MS/MS By matching By matching By matching By matching 1 9477000 0 9477000 0 0 0 0 7018 781 7119 31314 20675 20675 1 SLPIFQAR EAVELQRRSLPIFQAR SLPIFQARGQLLAQLR R S L A R G 1 1 0 0 0 1 0 0 0 1 1 0 0 1 1 1 0 0 0 0 0 8 0 930.5287 Q9H6R0;Q05BE5;I3L0M5 Q9H6R0 73 80 DHX33 Putative ATP-dependent RNA helicase DHX33 yes no 2 0.005313 108.09 By matching By matching By matching By matching By matching By MS/MS 1 19327000 0 0 0 0 0 19327000 7019 1496 7120 31315 20676 20676 1 SLPLENNGK KNYLTSKKSLPLENNG LPLENNGKRGHHNRLS K S L G K R 0 0 2 0 0 0 1 1 0 0 2 1 0 0 1 1 0 0 0 0 0 9 0 970.50836 E7EUI3;Q99728 E7EUI3 169 177 BARD1 BRCA1-associated RING domain protein 1 yes no 2 0.015329 76.064 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 5698600 518940 1046900 2662500 0 307730 1162500 7020 386 7121 31316;31317;31318;31319;31320 20677;20678 20677 2 SLPNEEIVQK GDAAASARSLPNEEIV PNEEIVQKIEEVLSGV R S L Q K I 0 0 1 0 0 1 2 0 0 1 1 1 0 0 1 1 0 0 0 1 0 10 0 1155.6136 P18583-2;P18583-10;P18583-3;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-6;P18583-8 P18583-2 55 64 SON Protein SON yes no 2 0.010621 72.848 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 8782000 0 1596700 1469100 752080 2537600 2426500 7021 854 7122 31321;31322;31323;31324;31325 20679 20679 1 SLPSTSSTSSTK MSPGAMRRSLPSTSST TSSTSSTKRLKSVEDE R S L T K R 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 6 3 0 0 0 0 12 0 1181.5776 Q12857-2;B1AKN5;F5H0R0;Q12857;B1AKN8;F8W8W3;B1AKN7 Q12857-2 265 276 NFIA Nuclear factor 1 A-type yes no 2 0.0018262 82.85 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 14806000 0 4121500 10078000 0 606490 0 7022 1062 7123 31326;31327;31328 20680;20681 20680 2 SLQGRTDPIPIVVK KLGQGLGKSLQGRTDP DPIPIVVKYDVMGMGR K S L V K Y 0 1 0 1 0 1 0 1 0 2 1 1 0 0 2 1 1 0 0 2 0 14 1 1521.8879 Q9UKJ3 Q9UKJ3 62 75 GPATCH8 G patch domain-containing protein 8 yes yes 3 0.004242 58.116 By matching By MS/MS By matching By matching By matching By matching 1 4179800 0 4179800 0 0 0 0 7023 1601 7124 31329 20682 20682 1 SLQHQEQLEDSK MGTSVRRRSLQHQEQL QEQLEDSKELQPVVSH R S L S K E 0 0 0 1 0 3 2 0 1 0 2 1 0 0 0 2 0 0 0 0 0 12 0 1440.6845 I3L476;Q9BSJ6-2;I3L1U3;I3L419;Q9BSJ6;I3L156;I3L427 I3L476 16 27 FAM64A Protein FAM64A yes no 2;3 3.2055E-07 101.89 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 2 5639600 0 2035600 1144500 0 0 2459500 7024 680 7125 31330;31331;31332;31333;31334 20683;20684;20685 20683 3 SLQSENAALR VLLLEKNRSLQSENAA QSENAALRISNSDLSG R S L L R I 2 1 1 0 0 1 1 0 0 0 2 0 0 0 0 2 0 0 0 0 0 10 0 1087.5622 P39880-2;P39880;P39880-3;P39880-4;P39880-5;P39880-6;H0YL76;G3V1Z6;Q13948-2;Q13948;H0YMA9 P39880-2 391 400 CUX1 Homeobox protein cut-like 1;Protein CASP yes no 2 4.9324E-09 115.78 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1581500 0 0 0 168420 252270 1160800 7025 906 7126 31335;31336;31337 20686 20686 1 SLQSENAALRISNSDLSGSAR VLLLEKNRSLQSENAA SDLSGSARRKGKDQPE R S L A R R 3 2 2 1 0 1 1 1 0 1 3 0 0 0 0 6 0 0 0 0 0 21 1 2175.088 P39880-2;P39880;P39880-3;P39880-5 P39880-2 391 411 CUX1 Homeobox protein cut-like 1 yes no 3 0.014235 38.878 By matching By matching By matching By matching By matching By MS/MS 1 1 1985400 0 852480 0 0 0 1132900 7026 906 7127 31338;31339 20687 20687 1 SLQSVAEER VNQLKFARSLQSVAEE LQSVAEERAGRHCGAL R S L E R A 1 1 0 0 0 1 2 0 0 0 1 0 0 0 0 2 0 0 0 1 0 9 0 1017.5091 E7EX53;Q642I1;E7EQV9;P61313 E7EX53 97 105 RPL15 Ribosomal protein L15;60S ribosomal protein L15 yes no 2 0.024533 67.334 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 2449400 512210 754190 0 0 1182900 0 7027 365 7128 31340;31341;31342 20688;20689 20688 2 SLSEAMSVEK IVQTEQIRSLSEAMSV SEAMSVEKIAAIKAKI R S L E K I 1 0 0 0 0 0 2 0 0 0 1 1 1 0 0 3 0 0 0 1 0 10 0 1079.5169 B4DV47;Q6P1J9 B4DV47 172 181 CDC73 Parafibromin yes no 2 0.023589 60.641 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 3072400 588920 447170 0 140010 722870 1173400 7028 131 7129 31343;31344;31345;31346;31347 20690 20690 1 SLSLEATSPLSAEK SEILSQPKSLSLEATS TSPLSAEKHSCTVPEG K S L E K H 2 0 0 0 0 0 2 0 0 0 3 1 0 0 1 4 1 0 0 0 0 14 0 1431.7457 Q86YC2 Q86YC2 380 393 PALB2 Partner and localizer of BRCA2 yes yes 2 0.0040397 58.32 By matching By MS/MS By matching By matching By matching By matching 1 6573400 0 6573400 0 0 0 0 7029 1274 7130 31348 20691 20691 1 SLSPQDRAAYK VHLDLWVKSLSPQDRA PQDRAAYKEYISNKRK K S L Y K E 2 1 0 1 0 1 0 0 0 0 1 1 0 0 1 2 0 0 1 0 0 11 1 1234.6306 E9PKP7;P17480-2;P17480 E9PKP7 599 609 UBTF Nucleolar transcription factor 1 yes no 2;3 0.021098 64.64 By MS/MS By MS/MS By matching By matching By MS/MS By matching 2 2 1 2 1 6365100 1055000 1472300 0 411950 2966100 459700 7030 455 7131 31349;31350;31351;31352;31353;31354;31355;31356 20692;20693;20694;20695 20695 4 SLSSGSNFCSEQK SLVKKKERSLSSGSNF SNFCSEQKTSGIINKF R S L Q K T 0 0 1 0 1 1 1 1 0 0 1 1 0 1 0 5 0 0 0 0 0 13 0 1429.6144 O95243-2 O95243-2 316 328 MBD4 Methyl-CpG-binding domain protein 4 no no 2 0.00086405 91.62 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 27751000 7479400 3188000 6016300 3661800 0 7405700 7031 769 7132 31357;31358;31359;31360;31361;31362 20696;20697;20698;20699;20700;20701 20698 6 SLTANPELIDR FTCEEYVKSLTANPEL ANPELIDRLACLSEEG K S L D R L 1 1 1 1 0 0 1 0 0 1 2 0 0 0 1 1 1 0 0 0 0 11 0 1227.6459 G3V1J5;Q9Y2L1-2;Q9Y2L1;F2Z2C0 G3V1J5 38 48 DIS3 Exosome complex exonuclease RRP44 yes no 2 0.02262 42.629 By matching By matching By matching By matching By matching By MS/MS 1 530340 0 0 0 0 0 530340 7032 577 7133 31363 20702 20702 1 SLTMHSIHNSQQPR GVSDFETKSLTMHSIH IHNSQQPRNAAKSLSR K S L P R N 0 1 1 0 0 2 0 0 2 1 1 0 1 0 1 3 1 0 0 0 0 14 0 1634.7947 Q86XZ4;H7BYM7;F8VS10 Q86XZ4 190 203 SPATS2 Spermatogenesis-associated serine-rich protein 2 yes no 3;4 0.0038027 57.434 By matching By MS/MS By MS/MS By matching By matching By matching 2 2 1 4266800 0 2145200 1516400 0 605190 0 7033 659 7134 31364;31365;31366;31367;31368 20703;20704;20705 20705 3 SLTRDTSHIPPLNRK ALQYFHPKSLTRDTSH HIPPLNRKADCPENAT K S L R K A 0 2 1 1 0 0 0 0 1 1 2 1 0 0 2 2 2 0 0 0 0 15 2 1733.9537 Q9H9L3 Q9H9L3 278 292 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 yes yes 4 0.014205 44.44 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 34786000 6426200 322010 5278700 3902000 9966200 8891200 7034 1509 7135 31369;31370;31371;31372;31373;31374 20706;20707;20708 20706 3 SLTSATSTSNIQSSASQPPRPQQGQVK VSSTPGQKSLTSATST RPQQGQVKLTMAQLTQ K S L V K L 2 1 1 0 0 5 0 1 0 1 1 1 0 0 3 7 3 0 0 1 0 27 1 2784.4002 Q12830-4;Q12830-2;Q12830 Q12830-4 2246 2272 BPTF Nucleosome-remodeling factor subunit BPTF yes no 3 1.558E-13 72.864 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 8803700 0 0 4971300 0 0 3832400 7035 1061 7136 31375;31376 20709;20710 20709 2 SLTSWTNDQGAR STSAPNWKSLTSWTND WTNDQGARRKTVFSPT K S L A R R 1 1 1 1 0 1 0 1 0 0 1 0 0 0 0 2 2 1 0 0 0 12 0 1334.6215 F5H1W0;Q7Z2W4-3;Q7Z2W4-2;Q7Z2W4;C9J6P4 F5H1W0 121 132 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 yes no 2 0.03709 45.357 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 6078100 582780 910480 896900 496350 897950 2293600 7036 231 7137 31377;31378;31379;31380;31381;31382 20711 20711 1 SLVAFEGEGQFEK ERAWIFEKSLVAFEGE EGEGQFEKLCQESAKQ K S L E K L 1 0 0 0 0 1 3 2 0 0 1 1 0 2 0 1 0 0 0 1 0 13 0 1439.6933 O96028-5;O96028-3;O96028;O96028-6;D6R9V2 O96028-5 280 292 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 2 9.8961E-60 131.79 By matching By MS/MS By matching By matching By matching By matching 1 28482000 0 28482000 0 0 0 0 7037 779 7138 31383 20712 20712 1 SLVGLGGTK GGGGFGSRSLVGLGGT LVGLGGTKSISISVAG R S L T K S 0 0 0 0 0 0 0 3 0 0 2 1 0 0 0 1 1 0 0 1 0 9 0 830.48617 P35908;CON__P35908 P35908 62 70 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 0.0095388 85.807 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 285280000 18681000 49554000 55962000 48272000 34924000 77889000 + 7038 302 7139 31384;31385;31386;31387;31388;31389 20713;20714;20715;20716 20713 4 SLVGVTAACTVRK VLPCGAGKSLVGVTAA TAACTVRKRCLVLGNS K S L R K R 2 1 0 0 1 0 0 1 0 0 1 1 0 0 0 1 2 0 0 3 0 13 1 1360.7497 P19447;G3V1S1 P19447 347 359 ERCC3 TFIIH basal transcription factor complex helicase XPB subunit yes no 3 0.0046737 56.569 By matching By matching By matching By matching By MS/MS By matching 1 636960 0 0 0 0 636960 0 7039 856 7140 31390 20717 20717 1 SLVMHTPPVLK GEAPTKRKSLVMHTPP MHTPPVLKKIIKEQPQ K S L L K K 0 0 0 0 0 0 0 0 1 0 2 1 1 0 2 1 1 0 0 2 0 11 0 1220.6951 P46013;F5H4V4;P46013-2;E7EN66 P46013 538 548 MKI67 Antigen KI-67 no no 2;3 0.0042296 73.841 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 18664000 0 2287500 7738800 1353400 0 7284000 7040 919;920 7141 31391;31392;31393;31394 20718;20719;20720;20721 20720 4 SLVMHTPPVLKK GEAPTKRKSLVMHTPP HTPPVLKKIIKEQPQP K S L K K I 0 0 0 0 0 0 0 0 1 0 2 2 1 0 2 1 1 0 0 2 0 12 1 1348.7901 P46013;F5H4V4;P46013-2;E7EN66 P46013 538 549 MKI67 Antigen KI-67 no no 3 2.0177E-18 115 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 3 4 3 131380000 21930000 22459000 17096000 8098300 20260000 41532000 7041 919;920 7142;7143 31395;31396;31397;31398;31399;31400;31401;31402;31403;31404;31405;31406;31407;31408;31409 20722;20723;20724;20725;20726;20727;20728;20729;20730;20731 20723 108 8 SLVNLGGSK AGGGFGSRSLVNLGGS LVNLGGSKSISISVAR R S L S K S 0 0 1 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 0 1 0 9 0 873.49198 P04264;CON__P04264 P04264 66 74 KRT1 Keratin, type II cytoskeletal 1 yes no 1;2 0.0063746 96.665 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 1677800000 153610000 193760000 401290000 290140000 318520000 320440000 + 7042 789 7144 31410;31411;31412;31413;31414;31415;31416;31417;31418;31419;31420;31421;31422 20732;20733;20734;20735;20736;20737;20738;20739 20736 8 SLVRAEAAALSTQCR RQVGTLHKSLVRAEAA AALSTQCREASGLSAD K S L C R E 4 2 0 0 1 1 1 0 0 0 2 0 0 0 0 2 1 0 0 1 0 15 1 1631.8413 Q9H6T0-2;Q9H6T0 Q9H6T0-2 73 87 ESRP2 Epithelial splicing regulatory protein 2 yes no 3 0.00073738 75.445 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 10349000 0 2703800 2004700 803800 0 4836400 7043 1498 7145 31423;31424;31425;31426 20740;20741 20741 2 SLVRAEAAALSTQCREASGLSADSLAR RQVGTLHKSLVRAEAA LSADSLARAEPLDKVL K S L A R A 7 3 0 1 1 1 2 1 0 0 4 0 0 0 0 5 1 0 0 1 0 27 2 2789.409 Q9H6T0-2;Q9H6T0 Q9H6T0-2 73 99 ESRP2 Epithelial splicing regulatory protein 2 yes no 4 0.016913 30.936 By matching By MS/MS By matching By matching By matching By matching 1 10789000 0 10789000 0 0 0 0 7044 1498 7146 31427 20742 20742 1 SLVSKGTLVQTK SRIKLGLKSLVSKGTL KGTLVQTKGTGASGSF K S L T K G 0 0 0 0 0 1 0 1 0 0 2 2 0 0 0 2 2 0 0 2 0 12 1 1259.7449 P16401;P16403;Q02539;P10412;P16402 P10412 86 97 HIST1H1B;HIST1H1C;HIST1H1A;HIST1H1E;HIST1H1D Histone H1.5;Histone H1.2;Histone H1.1;Histone H1.4;Histone H1.3 no no 3 0.022874 50.897 By MS/MS By matching By matching By matching By matching By matching 1 656500 656500 0 0 0 0 0 7045 818;843;842 7147 31428 20743 20743 1 SLWCWDLLHMK LLLLQDQRSLWCWDLL CWDLLHMKTSLPPGLP R S L M K T 0 0 0 1 1 0 0 0 1 0 3 1 1 0 0 1 0 2 0 0 0 11 0 1487.7054 O94927 O94927 530 540 HAUS5 HAUS augmin-like complex subunit 5 yes yes 2 0.028351 55.806 By MS/MS By matching By matching By matching By matching By matching 1 0 0 0 0 0 0 0 7046 759 7148 31429 20744 20744 77 1 SLYASSPGGVYATR ALRPSTSRSLYASSPG PGGVYATRSSAVRLRS R S L T R S 2 1 0 0 0 0 0 2 0 0 1 0 0 0 1 3 1 0 2 1 0 14 0 1427.7045 P08670;F5H288;B0YJC4 P08670 51 64 VIM Vimentin yes no 2 0.0011072 78.814 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 10596000 2088400 2625200 1333200 964980 0 3584000 7047 808 7149 31430;31431;31432;31433;31434 20745;20746;20747;20748;20749;20750 20748 6 SLYGLGGSK GGAGFGSRSLYGLGGS LYGLGGSKRISIGGGS R S L S K R 0 0 0 0 0 0 0 3 0 0 2 1 0 0 0 2 0 0 1 0 0 9 0 880.46543 P02538;CON__P02538;E7EUE8;P04259;CON__P04259;F5H6G5 P02538 60 68 KRT6A;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6B no no 2 0.013568 79.489 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 147400000 12013000 20631000 11078000 58116000 26182000 19377000 + 7048 287;788 7150 31435;31436;31437;31438;31439;31440 20751;20752;20753 20752 3 SLYNLGGSK GVGGYGSRSLYNLGGS LYNLGGSKRISISTSG R S L S K R 0 0 1 0 0 0 0 2 0 0 2 1 0 0 0 2 0 0 1 0 0 9 0 937.4869 P13647;CON__P13647;F8VV57;CON__Q5XQN5 P13647 64 72 KRT5 Keratin, type II cytoskeletal 5 yes no 2 0.0060612 93.667 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 2 1 1 1 1 105820000 8825600 12848000 22005000 28996000 11796000 21346000 + 7049 299 7151 31441;31442;31443;31444;31445;31446;31447;31448 20754;20755;20756;20757;20758;20759 20755 6 SLYNLRGNK SSGGFGSRSLYNLRGN LYNLRGNKSISMSVAG R S L N K S 0 1 2 0 0 0 0 1 0 0 2 1 0 0 0 1 0 0 1 0 0 9 1 1063.5774 F8VS64;P19013;CON__P19013;F8VX05;F8VZR6 F8VS64 51 59 KRT4 Keratin, type II cytoskeletal 4 yes no 2 0.025714 101.72 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3818500 0 0 644260 0 1338700 1835500 + 7050 300 7152 31449;31450;31451 20760 20760 1 SMDEFTASTPADLGEAGRLRK TIQDTMERSMDEFTAS GEAGRLRKKADIATSK R S M R K K 3 2 0 2 0 0 2 2 0 0 2 1 1 1 1 2 2 0 0 0 0 21 2 2251.0903 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 380 400 WAPAL Wings apart-like protein homolog yes no 3 3.5157E-05 69.188 By matching By MS/MS By matching By matching By matching By matching 1 1 12277000 0 9740100 0 2536700 0 0 7051 1253 7153 31452;31453 20761 20761 1 SMENYYQESGR VIHHSMSKSMENYYQE NYYQESGRAGRDDMKA K S M G R A 0 1 1 0 0 1 2 1 0 0 0 0 1 0 0 2 0 0 2 0 0 11 0 1362.551 P46063 P46063 394 404 RECQL ATP-dependent DNA helicase Q1 yes yes 2 0.004669 75.788 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 3887200 142510 698010 595050 170100 437000 1844600 7052 922 7154 31454;31455;31456;31457;31458;31459 20762 20762 1 SMLRLQK ________________ MSMLRLQKRLASSVLR M S M Q K R 0 1 0 0 0 1 0 0 0 0 2 1 1 0 0 1 0 0 0 0 0 7 1 874.50586 P84098 P84098 2 8 RPL19 60S ribosomal protein L19 yes yes 2 0.019804 85.265 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 2 9519500 0 0 1768000 1910500 559960 5281000 7053 1016 7155 31460;31461;31462;31463;31464 20763;20764 20763 1 SMMNLQTK APPKTFEKSMMNLQTK SMMNLQTKIDAKKEQL K S M T K I 0 0 1 0 0 1 0 0 0 0 1 1 2 0 0 1 1 0 0 0 0 8 0 951.45177 P11387 P11387 643 650 TOP1 DNA topoisomerase 1 yes yes 2 0.019592 80.219 By matching By matching By matching By matching By matching By MS/MS 1 1 3795300 92910 0 0 0 0 3702400 7054 825 7156 31465;31466 20765 20765 1 SMSCEESNIGAISK KSGPKEQKSMSCEESN SNIGAISKSSMELPSK K S M S K S 1 0 1 0 1 0 2 1 0 2 0 1 1 0 0 4 0 0 0 0 0 14 0 1511.6596 B4DZN9;Q6P4F7 B4DZN9 716 729 ARHGAP11A Rho GTPase-activating protein 11A yes no 2 0.0048963 66.246 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 4972900 0 2238300 914740 954480 865420 0 7055 147 7157 31467;31468;31469;31470;31471 20766;20767;20768 20768 3 SMSFPTGK IKQSVGNKSMSFPTGK SMSFPTGKSDRGFRYN K S M G K S 0 0 0 0 0 0 0 1 0 0 0 1 1 1 1 2 1 0 0 0 0 8 0 853.40039 Q01780;Q01780-2 Q01780 866 873 EXOSC10 Exosome component 10 yes no 2 0.019305 80.455 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 1 1 1 26800000 3165900 3214300 4377200 1971100 4999300 9072200 7056 1030 7158 31472;31473;31474;31475;31476;31477;31478 20769;20770;20771;20772;20773 20771 5 SMVKGLDSYEEK QDYARFKKSMVKGLDS GLDSYEEKEDKVIKEM K S M E K E 0 0 0 1 0 0 2 1 0 0 1 2 1 0 0 2 0 0 1 1 0 12 1 1384.6544 Q86UT8;E9PJ16 Q86UT8 132 143 CCDC84 Coiled-coil domain-containing protein 84 yes no 2;3 2.373E-117 157.5 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 51596000 4316700 9469400 12627000 5113200 6283200 13786000 7057 1263 7159 31479;31480;31481;31482;31483;31484;31485;31486;31487;31488;31489;31490 20774;20775;20776;20777;20778;20779;20780;20781;20782;20783;20784;20785;20786 20778 13 SMVKGLDSYEEKEDK QDYARFKKSMVKGLDS SYEEKEDKVIKEMAAQ K S M D K V 0 0 0 2 0 0 3 1 0 0 1 3 1 0 0 2 0 0 1 1 0 15 2 1756.8189 Q86UT8;E9PJ16 Q86UT8 132 146 CCDC84 Coiled-coil domain-containing protein 84 yes no 3 0.0076563 60.158 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 7362600 1048200 905480 1437300 911640 784770 2275200 7058 1263 7160 31491;31492;31493;31494;31495;31496 20787;20788 20787 2 SNAQRQDIAFAYQR IVNILTNRSNAQRQDI DIAFAYQRRTKKELAS R S N Q R R 3 2 1 1 0 3 0 0 0 1 0 0 0 1 0 1 0 0 1 0 0 14 1 1666.8176 H0YKS4;H0YMD0;H0YMU9;H0YN42;P07355;H0YKV8;H0YKL9;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMM1;P07355-2;H0YMW4;H0YM50 H0YKS4 64 77 ANXA2 Annexin;Annexin A2 yes no 3 1.53E-14 101.38 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 7059 626 7161 31497 20789 20789 1 SNASTLESHETEEPAAK LKADTSLKSNASTLES ETEEPAAKKRKCPESD K S N A K K 3 0 1 0 0 0 4 0 1 0 1 1 0 0 1 3 2 0 0 0 0 17 0 1799.8174 Q9UJA5;B4DUV6 Q9UJA5 472 488 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 yes no 3 0.0029483 66.289 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 3946200 0 768690 392570 0 967340 1817600 7060 1597 7162 31498;31499;31500;31501 20790;20791 20790 2 SNCVKEVEKLQEK FGPPSRRKSNCVKEVE EVEKLQEKREKRRLQQ K S N E K R 0 0 1 0 1 1 3 0 0 0 1 3 0 0 0 1 0 0 0 2 0 13 2 1589.8083 O00139-1;E9PB70;O00139;O00139-4;O00139-2;D6R9M0 O00139-2 130 142 KIF2A Kinesin-like protein KIF2A no no 3 0.0056801 85.45 By MS/MS By matching By matching By matching By matching By matching 1 1702300 1702300 0 0 0 0 0 7061 403;686 7163 31502 20792 20792 1 SNDEEAFTFAR TVVDKWFKSNDEEAFT EEAFTFARMLIAQEGL K S N A R M 2 1 1 1 0 0 2 0 0 0 0 0 0 2 0 1 1 0 0 0 0 11 0 1285.5575 P35520;P35520-2;F5H2U1;B7Z2D6 P35520 326 336 CBS Cystathionine beta-synthase yes no 2 0.0054843 71.888 By matching By MS/MS By matching By matching By matching By matching 1 790170 0 790170 0 0 0 0 7062 898 7164 31503 20793 20793 1 SNDVVCKNQDELR QKISPYFKSNDVVCKN CKNQDELRNRSVKVIC K S N L R N 0 1 2 2 1 1 1 0 0 0 1 1 0 0 0 1 0 0 0 2 0 13 1 1575.7311 Q9Y2M0-2;Q9Y2M0;H3BQ24 Q9Y2M0-2 131 143 FAN1 Fanconi-associated nuclease 1 yes no 2;3 0.0057684 64.104 By matching By matching By matching By matching By MS/MS By matching 1 1 2 2117200 399250 800060 0 0 917880 0 7063 1634 7165 31504;31505;31506;31507 20794;20795 20794 2 SNEDQSMGNWQIK KFVRLRNKSNEDQSMG SMGNWQIKRQNGDDPL K S N I K R 0 0 2 1 0 2 1 1 0 1 0 1 1 0 0 2 0 1 0 0 0 13 0 1535.6675 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q5TCI8 P02545 458 470 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.0020639 72.209 By matching By MS/MS By matching By matching By matching By matching 1 1 1958500 0 833450 0 0 0 1125100 7064 783 7166 31508;31509 20796;20797 20796 2 SNEMITNLGK YIAQGKRKSNEMITNL EMITNLGKKQKTDVST K S N G K K 0 0 2 0 0 0 1 1 0 1 1 1 1 0 0 1 1 0 0 0 0 10 0 1105.5438 Q7Z2T5 Q7Z2T5 612 621 TRMT1L TRMT1-like protein yes yes 2 5.6374E-15 119.27 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 38205000 5072800 0 15028000 6024700 9995900 2083700 7065 1248 7167 31510;31511;31512;31513;31514 20798;20799;20800;20801;20802 20799 5 SNESVDIQDQEEK RSGKWKNKSNESVDIQ DIQDQEEKVVKQECIK K S N E K V 0 0 1 2 0 2 3 0 0 1 0 1 0 0 0 2 0 0 0 1 0 13 0 1519.6638 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1576 1588 RIF1 Telomere-associated protein RIF1 yes no 2 1.4635E-46 127.32 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 17924000 3243200 2797500 3618100 1258100 3040000 3967600 7066 1201 7168 31515;31516;31517;31518;31519;31520;31521 20803;20804;20805;20806;20807;20808;20809 20803 6 SNFSNSADDIKSK KSESNKRKSNFSNSAD SADDIKSKKKRESNDI K S N S K K 1 0 2 2 0 0 0 0 0 1 0 2 0 1 0 4 0 0 0 0 0 13 1 1411.6579 G3V1X9;P45973 G3V1X9 92 104 CBX5 Chromobox protein homolog 5 yes no 2;3 1.9058E-46 126.32 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 2 1 21390000 1674800 3649400 2934900 1718100 2939600 8472700 7067 579 7169 31522;31523;31524;31525;31526;31527;31528;31529;31530;31531;31532 20810;20811;20812;20813;20814;20815;20816;20817;20818 20813 9 SNGELSESPGAGK VGDFKSEKSNGELSES SESPGAGKGASGSTRI K S N G K G 1 0 1 0 0 0 2 3 0 0 1 1 0 0 1 3 0 0 0 0 0 13 0 1231.5681 Q12830-4;Q12830-2;Q12830;F5GXF5;F5H176 Q12830-4 756 768 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 0.035741 42.682 By matching By matching By MS/MS By matching By matching By matching 1 243640 0 0 243640 0 0 0 7068 1061 7170 31533 20819 20819 1 SNGLEGSWSGNVTQK QPNSKFAKSNGLEGSW WSGNVTQKDSSSEMFC K S N Q K D 0 0 2 0 0 1 1 3 0 0 1 1 0 0 0 3 1 1 0 1 0 15 0 1562.7325 Q92613 Q92613 666 680 PHF16 Protein Jade-3 yes yes 2 0.0049454 53.168 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 4984000 647510 1599100 989610 588960 0 1158900 7069 1354 7171 31534;31535;31536;31537;31538 20820;20821 20820 2 SNGLIHSANVR GLAIKIQRSNGLIHSA LIHSANVRTVNLEKSC R S N V R T 1 1 2 0 0 0 0 1 1 1 1 0 0 0 0 2 0 0 0 1 0 11 0 1166.6156 B7Z6Q6;Q99661;Q5JR91 B7Z6Q6 22 32 KIF2C Kinesin-like protein KIF2C yes no 2 0.0024862 87.216 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 16874000 0 2753600 2258000 705860 3477500 7678800 7070 193 7172 31539;31540;31541;31542;31543 20822;20823;20824 20822 3 SNGLIHSANVRTVNLEK GLAIKIQRSNGLIHSA VRTVNLEKSCVSVEWA R S N E K S 1 1 3 0 0 0 1 1 1 1 2 1 0 0 0 2 1 0 0 2 0 17 1 1850.9963 B7Z6Q6;Q99661;Q5JR91 B7Z6Q6 22 38 KIF2C Kinesin-like protein KIF2C yes no 3 8.1014E-15 101.01 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 34286000 8320100 5218900 12487000 1317300 2577100 4365800 7071 193 7173 31544;31545;31546;31547;31548;31549 20825;20826;20827;20828;20829 20826 5 SNGYEDHMAEDCRGDIGR ________________ DCRGDIGRTNLIVNYL M S N G R T 1 2 1 3 1 0 2 3 1 1 0 0 1 0 0 1 0 0 1 0 0 18 1 2080.8327 Q15717 Q15717 2 19 ELAVL1 ELAV-like protein 1 yes yes 3 0.038239 63.681 By matching By matching By matching By matching By matching By MS/MS 1 1 1947900 0 865670 0 0 0 1082200 7072 1146 7174 31550;31551 20830 20830 1 SNIHSSVMASPGGLSAVR LLTSITTKSNIHSSVM PGGLSAVRTSNFALVG K S N V R T 2 1 1 0 0 0 0 2 1 1 1 0 1 0 1 5 0 0 0 2 0 18 0 1768.889 Q9NQW6;Q9NQW6-2;H7C3S1;H7C1C2 Q9NQW6 918 935 ANLN Actin-binding protein anillin yes no 3 0.00042758 81.51 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 9540200 991280 497920 818050 381070 1712400 5139500 7073 1533 7175 31552;31553;31554;31555;31556;31557 20831;20832;20833 20832 3 SNKSPWVCLTCSSVHCGR PPHLAVCRSNKSPWVC CSSVHCGRYVNGHAKK R S N G R Y 0 1 1 0 3 0 0 1 1 0 1 1 0 0 1 4 1 1 0 2 0 18 1 2133.9506 Q6JHV3;H0YMI4;Q9Y6I4;H0YL81;B4DV65;H0YMP6;H0YNX9;H0YLJ0 Q6JHV3 12 29 USP3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 3 0.030094 35.852 By matching By matching By matching By matching By matching By MS/MS 1 1902600 0 0 0 0 0 1902600 7074 628 7176 31558 20834 20834 1 SNKSPWVCLTCSSVHCGRYVNGHAK PPHLAVCRSNKSPWVC RYVNGHAKKHYEDAQV R S N A K K 1 1 2 0 3 0 0 2 2 0 1 2 0 0 1 4 1 1 1 3 0 25 2 2903.3378 Q6JHV3;H0YMI4;Q9Y6I4;H0YL81;B4DV65;H0YMP6;H0YNX9 Q6JHV3 12 36 USP3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 6 0.034692 19.532 By matching By matching By matching By matching By matching By MS/MS 1 1845700 0 0 0 0 0 1845700 7075 628 7177 31559 20835 20835 0 SNLTEHEHFHTR CGKVFSHKSNLTEHEH EHEHFHTREKPFECNE K S N T R E 0 1 1 0 0 0 2 0 3 0 1 0 0 1 0 1 2 0 0 0 0 12 0 1506.6964 Q15072 Q15072 29 40 ZNF146 Zinc finger protein OZF yes yes 3 0.0027045 71.268 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 4687100 0 619570 626930 591890 1037400 1811300 7076 1131 7178 31560;31561;31562;31563;31564 20836;20837 20836 2 SNMGHPEPASGLAALAK PLLIGSTKSNMGHPEP SGLAALAKVLLSLEHG K S N A K V 4 0 1 0 0 0 1 2 1 0 2 1 1 0 2 2 0 0 0 0 0 17 0 1649.8195 P49327 P49327 327 343 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 3 0.019602 39.12 By matching By matching By matching By matching By matching By MS/MS 1 1990300 0 0 0 0 0 1990300 7077 934 7179 31565 20838 20838 1 SNNIINETTTRNNALEK EFKSIPAKSNNIINET TRNNALEKEKEKEEKK K S N E K E 1 1 5 0 0 0 2 0 0 2 1 1 0 0 0 1 3 0 0 0 0 17 1 1930.9708 E9PD53;Q9NTJ3;Q9NTJ3-2;F5H0U7 E9PD53 410 426 SMC4 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 4 yes no 3 0.0018643 57.148 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6808900 0 2254200 1281800 0 749200 2523700 7078 419 7180 31566;31567;31568;31569 20839 20839 1 SNPEGAEDRAVGAQASVGSR AEPRPRTRSNPEGAED AQASVGSRSEGEGEAA R S N S R S 4 2 1 1 0 1 2 3 0 0 0 0 0 0 1 3 0 0 0 2 0 20 1 1956.9249 Q9NWV8-3;Q9NWV8 Q9NWV8-3 29 48 BABAM1 BRISC and BRCA1-A complex member 1 yes no 3 0.00021425 63.894 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 8185800 421020 1845700 2644300 681730 744230 1848800 7079 1556 7181 31570;31571;31572;31573;31574;31575 20840;20841 20841 2 SNQQNLGTIK YKDSCNRKSNQQNLGT QQNLGTIKCSNLCTEI K S N I K C 0 0 2 0 0 2 0 1 0 1 1 1 0 0 0 1 1 0 0 0 0 10 0 1101.5778 P23921;H0YFI0;E9PD78;E9PL69;F5H861 P23921 415 424 RRM1 Ribonucleoside-diphosphate reductase large subunit;Ribonucleoside-diphosphate reductase yes no 2 0.0086316 80.706 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 6856700 0 3141600 3715000 0 0 0 7080 870 7182 31576;31577 20842;20843 20842 2 SNRDELELELAENRK KKQLADERSNRDELEL LELAENRKLLTEKDAQ R S N R K L 1 2 2 1 0 0 4 0 0 0 3 1 0 0 0 1 0 0 0 0 0 15 2 1814.9123 Q14980-2;Q14980;Q9BTE9;F5H4J1;F5H6Y5 Q14980-2 228 242 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.0097204 57.595 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 4149200 0 1255700 1514300 513720 865500 0 7081 1121 7183 31578;31579;31580;31581 20844 20844 1 SNRDKECGQLLISENQK QRKCGFCKSNRDKECG LLISENQKVAAHHKCM K S N Q K V 0 1 2 1 1 2 2 1 0 1 2 2 0 0 0 2 0 0 0 0 0 17 2 2017.9851 B4E0G4;Q8IWS0;E9PC97;Q5JRC6;Q8IWS0-2 B4E0G4 22 38 PHF6 PHD finger protein 6 yes no 3 0.0072493 62.525 By MS/MS By matching By matching By MS/MS By matching By matching 2 1 1 1 1 13045000 3350500 0 4761800 2147300 526840 2258100 7082 152 7184 31582;31583;31584;31585;31586;31587 20845;20846;20847;20848 20845 4 SNRPNNNPGGSLRR ________________ NPGGSLRRSQRNTAGA M S N R R S 0 3 4 0 0 0 0 2 0 0 1 0 0 0 2 2 0 0 0 0 0 14 2 1537.7822 Q14CA3;Q14669;Q14CF1;B4DYJ6;G5E9G6;C9JLD7;C9JLJ5;C9JSX9;F8W9P3 Q14CA3 2 15 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 3 0.0011499 76.759 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 34587000 4751400 4167600 5034100 3616800 6165200 10852000 7083 1122 7185 31588;31589;31590;31591;31592;31593 20849 20849 1 SNSLIHTECLSQVQR ________________ ECLSQVQRILRERFCR K S N Q R I 0 1 1 0 1 2 1 0 1 1 2 0 0 0 0 3 1 0 0 1 0 15 0 1770.8683 O43929;C9JGH7;C9J2X8;Q53SE3 O43929 8 22 ORC4;ORC4L Origin recognition complex subunit 4 yes no 3 1.0605E-70 135.14 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 10317000 1356200 1187800 0 0 2475900 5296800 7084 725 7186 31594;31595;31596;31597 20850 20850 1 SNSQVPQQSHFTK PEQGTNEKSNSQVPQQ PQQSHFTKTTTGPPHL K S N T K T 0 0 1 0 0 3 0 0 1 0 0 1 0 1 1 3 1 0 0 1 0 13 0 1486.7165 Q9UNY4;Q9UNY4-2 Q9UNY4 469 481 TTF2 Transcription termination factor 2 yes no 3 0.0014494 85.672 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 15793000 2579400 2364000 2862900 2242100 2032000 3712500 7085 1618 7187 31598;31599;31600;31601;31602;31603;31604 20851;20852;20853;20854;20855;20856;20857;20858 20854 8 SNTSLPPLPFK DPVKSQSKSNTSLPPL SLPPLPFKRGGGKDGS K S N F K R 0 0 1 0 0 0 0 0 0 0 2 1 0 1 3 2 1 0 0 0 0 11 0 1199.655 P46013;F5H4V4;P46013-2 P46013 2987 2997 MKI67 Antigen KI-67 no no 2 6.4225E-104 155.33 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 584830000 14276000 0 247800000 3606300 319160000 0 7086 919;920 7188 31605;31606;31607;31608;31609 20859;20860;20861;20862 20860 4 SNTSLPPLPFKR DPVKSQSKSNTSLPPL LPPLPFKRGGGKDGSV K S N K R G 0 1 1 0 0 0 0 0 0 0 2 1 0 1 3 2 1 0 0 0 0 12 1 1355.7561 P46013;F5H4V4;P46013-2 P46013 2987 2998 MKI67 Antigen KI-67 no no 3 0.003387 62.694 By matching By MS/MS By matching By matching By matching By matching 1 3144400 0 3144400 0 0 0 0 7087 919;920 7189 31610 20863 20863 1 SNVESALSHGLK CIKLQKRKSNVESALS SALSHGLKSLNRKSPS K S N L K S 1 0 1 0 0 0 1 1 1 0 2 1 0 0 0 3 0 0 0 1 0 12 0 1240.6412 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;Q76FK4-3 F5H101 432 443 NOL8 Nucleolar protein 8 yes no 2;3 0.0015365 90.793 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 1 1 2 23934000 0 3223200 2839800 890150 2450300 14531000 7088 27 7190 31611;31612;31613;31614;31615;31616;31617 20864;20865;20866;20867 20865 4 SNVLNVNNHITQYVK KDIKSSLKSNVLNVNN NHITQYVKICNEQKAE K S N V K I 0 0 4 0 0 1 0 0 1 1 1 1 0 0 0 1 1 0 1 3 0 15 0 1741.9111 Q8NI77 Q8NI77 361 375 KIF18A Kinesin-like protein KIF18A yes yes 3 0.0041207 53.168 By matching By matching By matching By MS/MS By matching By matching 1 1 9518200 0 5410200 0 4108100 0 0 7089 1332 7191 31618;31619 20868 20868 1 SNVLTGLQDSSTDNRAK QVPTFARRSNVLTGLQ SSTDNRAKLDLGAQGK R S N A K L 1 1 2 2 0 1 0 1 0 0 2 1 0 0 0 3 2 0 0 1 0 17 1 1804.8915 O00257;O00257-3 O00257 90 106 CBX4 E3 SUMO-protein ligase CBX4 yes no 3 1.1712E-64 127.66 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 1 1 37636000 10089000 4764600 5048100 2837000 5352700 9544400 7090 687 7192 31620;31621;31622;31623;31624;31625;31626;31627 20869;20870;20871;20872;20873;20874;20875;20876;20877 20877 8 SNVQPTAAPGQK ________________ PTAAPGQKVMENSSGT R S N Q K V 2 0 1 0 0 2 0 1 0 0 0 1 0 0 2 1 1 0 0 1 0 12 0 1196.6149 B4DNM4;C7G535;Q96GD4 B4DNM4 4 15 AURKB Aurora kinase B yes no 2 0.032076 46.88 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1219700 0 838280 0 106930 0 274470 7091 111 7193 31628;31629;31630 20878 20878 1 SNVSSPATPTASSSSSTTPTRK VEGKRKRRSNVSSPAT SSTTPTRKITESPRAS R S N R K I 2 1 1 0 0 0 0 0 0 0 0 1 0 0 3 8 5 0 0 1 0 22 1 2150.0451 Q12888;Q12888-2;A6NNK5;F8VY86;H7BZY0 Q12888 1631 1652 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 2.7001E-06 63.225 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 7505600 1998500 0 2548200 1175800 1783200 0 7092 1063 7194 31631;31632;31633;31634;31635 20879;20880;20881;20882;20883;20884 20882 5 SPAFALKNR VLPITVPKSPAFALKN PAFALKNRIRMPTKED K S P N R I 2 1 1 0 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 0 0 9 1 1002.5611 Q9ULW0;Q96RR5 Q9ULW0 486 494 TPX2;HCA90 Targeting protein for Xklp2 yes no 2 5.3035E-06 113.26 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 5978900 500970 1273300 932000 0 826560 2446100 7093 1611 7195 31636;31637;31638;31639;31640 20885;20886 20885 2 SPAVKPAAAPKQPVGGGQK NKPAVTTKSPAVKPAA QPVGGGQKLLTRKADS K S P Q K L 4 0 0 0 0 2 0 3 0 0 0 3 0 0 4 1 0 0 0 2 0 19 2 1787.0054 Q14978;Q14978-3;Q14978-2 Q14978 397 415 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 3 0.0037662 58.712 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 3193500 429620 527390 0 0 1348900 887640 7094 1120 7196 31641;31642;31643;31644 20887 20887 1 SPLLAGGSPPQPVVPAHKDK SVGVMEMRSPLLAGGS VVPAHKDKSGAPPVRS R S P D K S 2 0 0 1 0 1 0 2 1 0 2 2 0 0 5 2 0 0 0 2 0 20 1 1994.0949 B4DYB4;Q8NFH5;C9JIY9;C9IYQ7;F8WCF5;F8WEL4 B4DYB4 49 68 NUP35 Nucleoporin NUP53 yes no 3 4.3529E-11 92.679 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 13133000 2315300 2076800 1443400 1025200 2189300 4082600 7095 144 7197 31645;31646;31647;31648;31649;31650 20888;20889;20890 20889 3 SPLSALARK PKKGVLGKSPLSALAR PLSALARKKARLSLVI K S P R K K 2 1 0 0 0 0 0 0 0 0 2 1 0 0 1 2 0 0 0 0 0 9 1 941.56581 I3L1L3;Q9BQG0;Q9BQG0-2;I3L2H8 I3L1L3 1210 1218 MYBBP1A Myb-binding protein 1A yes no 2 0.018997 105.52 By matching By matching By matching By matching By matching By MS/MS 1 1 1 6422600 0 770820 0 0 2266600 3385100 7096 682 7198 31651;31652;31653 20891 20891 1 SPLVSDGGSPSR S P S R 0 1 0 1 0 0 0 2 0 0 1 0 0 0 2 4 0 0 0 1 0 12 0 1157.5677 REV__F5H4R1 yes no 2 0.0018669 89.679 By matching By matching By matching By matching By matching By MS/MS 2 6028700 0 0 0 0 0 6028700 + 7097 1672 7199 31654;31655 20892 20892 1 SPPHCELMAGHLR NWMFSNAKSPPHCELM ELMAGHLRNRITADGA K S P L R N 1 1 0 0 1 0 1 1 2 0 2 0 1 0 2 1 0 0 0 0 0 13 0 1503.7075 Q8IWX8 Q8IWX8 186 198 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 3 0.027566 43.594 By matching By matching By matching By matching By matching By MS/MS 1 1324900 0 0 0 0 0 1324900 7098 1281 7200 31656 20893 20893 1 SPPSYSVLYPSSDPK APLASWVRSPPSYSVL LYPSSDPKSSHLKGQA R S P P K S 0 0 0 1 0 0 0 0 0 0 1 1 0 0 4 5 0 0 2 1 0 15 0 1622.7828 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 336 350 SYNPO Synaptopodin yes no 2 0.0026064 58.885 By matching By MS/MS By matching By matching By matching By matching 1 1465300 0 1465300 0 0 0 0 7099 1297 7201 31657 20894 20894 1 SPQDLASTSR IRIPYPGRSPQDLAST QDLASTSRAREGLRNM R S P S R A 1 1 0 1 0 1 0 0 0 0 1 0 0 0 1 3 1 0 0 0 0 10 0 1060.5149 Q9HC52;C9J6K3;C9JM54 Q9HC52 110 119 CBX8 Chromobox protein homolog 8 yes no 2 0.0057609 86.344 By matching By matching By matching By matching By matching By MS/MS 1 693310 0 0 0 0 0 693310 7100 1519 7202 31658 20895 20895 1 SPQFINLK NLVANTARSPQFINLK SPQFINLKRDPRQAAG R S P L K R 0 0 1 0 0 1 0 0 0 1 1 1 0 1 1 1 0 0 0 0 0 8 0 945.52837 Q92576-2;Q92576 Q92576-2 1554 1561 PHF3 PHD finger protein 3 yes no 2 0.02554 75.043 By MS/MS By matching By matching By matching By matching By matching 1 3566700 3566700 0 0 0 0 0 7101 1353 7203 31659 20896 20896 1 SPQPDPVDTPASTK KTTKIACKSPQPDPVD VDTPASTKQRPKRNLR K S P T K Q 1 0 0 2 0 1 0 0 0 0 0 1 0 0 4 2 2 0 0 1 0 14 0 1438.694 P46013;F5H4V4;P46013-2 P46013 2344 2357 MKI67 Antigen KI-67 no no 2 0.0014485 69.261 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2019800 0 0 0 178760 630400 1210600 7102 919;920 7204 31660;31661;31662 20897 20897 1 SPQPDPVDTPASTKQRPK KTTKIACKSPQPDPVD ASTKQRPKRNLRKADV K S P P K R 1 1 0 2 0 2 0 0 0 0 0 2 0 0 5 2 2 0 0 1 0 18 2 1948.0014 P46013;F5H4V4;P46013-2 P46013 2344 2361 MKI67 Antigen KI-67 no no 4 0.0082536 42.633 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 7216100 510030 1413800 1253700 634970 1772800 1630800 7103 919;920 7205 31663;31664;31665;31666;31667;31668 20898 20898 1 SPQPDPVGTPTIFKPQSK KTTKIACRSPQPDPVG TIFKPQSKRSLRKADV R S P S K R 0 0 0 1 0 2 0 1 0 1 0 2 0 1 5 2 2 0 0 1 0 18 1 1923.0102 P46013;F5H4V4;P46013-2 P46013 2223 2240 MKI67 Antigen KI-67 no no 3 0.02784 36.504 By matching By MS/MS By matching By matching By matching By matching 1 1194300 0 1194300 0 0 0 0 7104 919;920 7206 31669 20899 20899 1 SPQPDPVKTPTSSK KITEVSCKSPQPDPVK VKTPTSSKQRLKISLG K S P S K Q 0 0 0 1 0 1 0 0 0 0 0 2 0 0 4 3 2 0 0 1 0 14 1 1467.7569 P46013;F5H4V4;P46013-2 P46013 1983 1996 MKI67 Antigen KI-67 no no 3 0.02516 43.316 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 2628900 0 336420 354490 535650 369810 1032500 7105 919;920 7207 31670;31671;31672;31673;31674 20900 20900 1 SPQSDPADTPTNTK TTKKILCKSPQSDPAD ADTPTNTKQRPKRSLK K S P T K Q 1 0 1 2 0 1 0 0 0 0 0 1 0 0 3 2 3 0 0 0 0 14 0 1457.6634 P46013;F5H4V4;P46013-2 P46013 1861 1874 MKI67 Antigen KI-67 no no 2 0.0023386 64.244 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 2465800 0 368880 509340 0 370000 1217600 7106 919;920 7208 31675;31676;31677;31678 20901;20902;20903 20903 3 SPQSDPADTPTNTKQRPK TTKKILCKSPQSDPAD TNTKQRPKRSLKKADV K S P P K R 1 1 1 2 0 2 0 0 0 0 0 2 0 0 4 2 3 0 0 0 0 18 2 1966.9708 P46013;F5H4V4;P46013-2 P46013 1861 1878 MKI67 Antigen KI-67 no no 3 0.010306 50.077 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 2763800 321420 0 598280 130120 542670 1171300 7107 919;920 7209 31679;31680;31681;31682;31683 20904 20904 1 SPSDLHISPLAK PGSSLEARSPSDLHIS LHISPLAKKLPPPPGS R S P A K K 1 0 0 1 0 0 0 0 1 1 2 1 0 0 2 3 0 0 0 0 0 12 0 1263.6823 B7ZM82;B3KVH1;O95785;O95785-2 B7ZM82 441 452 WIZ Protein Wiz yes no 2;3 1.0686E-07 114.76 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 3 3 67929000 10316000 11111000 6588700 7745800 14066000 18101000 7108 212 7210 31684;31685;31686;31687;31688;31689;31690;31691;31692;31693;31694;31695;31696;31697;31698 20905;20906;20907;20908;20909;20910;20911;20912;20913;20914;20915 20911 10 SPSISNMAALSR SSPSLHSRSPSISNMA SNMAALSRAHSPALGV R S P S R A 2 1 1 0 0 0 0 0 0 1 1 0 1 0 1 4 0 0 0 0 0 12 0 1232.6183 Q9H1A4 Q9H1A4 341 352 ANAPC1 Anaphase-promoting complex subunit 1 yes yes 2 0.001819 81.92 By matching By matching By matching By matching By matching By MS/MS 1 1060300 0 0 0 0 0 1060300 7109 1483 7211 31699 20916 20916 1 SPVPSAFSDQSR PPAQDQPRSPVPSAFS SAFSDQSRCLIAQTTP R S P S R C 1 1 0 1 0 1 0 0 0 0 0 0 0 1 2 4 0 0 0 1 0 12 0 1276.6048 Q9UQ35;F5GWZ7;Q9UQ35-2;I3L3Q8 Q9UQ35 2449 2460 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.032584 43.405 By matching By matching By matching By matching By matching By MS/MS 1 1 722170 0 286300 0 0 0 435860 7110 1623 7212 31700;31701 20917 20917 0 SQAAPGSSPCRGHVLR NSAAVLKKSQAAPGSS PCRGHVLRKAKEWELK K S Q L R K 2 2 0 0 1 1 0 2 1 0 1 0 0 0 2 3 0 0 0 1 0 16 1 1678.8322 Q8N556;E9PDT7 Q8N556 704 719 AFAP1 Actin filament-associated protein 1 yes no 3 0.01723 41.495 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 4387300 521580 622150 840460 497890 869720 1035500 7111 423 7213 31702;31703;31704;31705;31706;31707 20918;20919 20918 2 SQAAPGSSPCRGHVLRK NSAAVLKKSQAAPGSS CRGHVLRKAKEWELKN K S Q R K A 2 2 0 0 1 1 0 2 1 0 1 1 0 0 2 3 0 0 0 1 0 17 2 1806.9271 Q8N556;E9PDT7 Q8N556 704 720 AFAP1 Actin filament-associated protein 1 yes no 3 0.028886 43.914 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 4661100 0 729220 948770 726320 772800 1484000 7112 423 7214 31708;31709;31710;31711;31712 20920 20920 1 SQAEPLSGNKEPLADTSSNQQK QQHQQQPKSQAEPLSG DTSSNQQKNFKMQSAA K S Q Q K N 2 0 2 1 0 3 2 1 0 0 2 2 0 0 2 4 1 0 0 0 0 22 1 2328.1193 P49750-3;P49750;P49750-4;H0YIQ2 P49750-3 659 680 YLPM1 YLP motif-containing protein 1 yes no 3 4.9402E-06 70.094 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 8211900 1937900 1361200 1339000 1829600 1744100 0 7113 941 7215 31713;31714;31715;31716;31717 20921;20922;20923;20924 20923 4 SQAIYLESKDNQK YDKRWYHKSQAIYLES LESKDNQKLSCVISSV K S Q Q K L 1 0 1 1 0 2 1 0 0 1 1 2 0 0 0 2 0 0 1 0 0 13 1 1522.7627 Q9H7L9 Q9H7L9 272 284 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 yes yes 3 0.027871 69.314 By matching By MS/MS By matching By matching By matching By matching 1 1 683910 0 350220 0 0 333690 0 7114 1500 7216 31718;31719 20925 20925 0 SQAPCANKDEADLSSK FQYQLACRSQAPCANK DEADLSSKQAAEEVWA R S Q S K Q 3 0 1 2 1 1 1 0 0 0 1 2 0 0 1 3 0 0 0 0 0 16 1 1719.7734 H7BXV2;Q96SK2-3;Q96SK2-2;Q96SK2 H7BXV2 296 311 TMEM209 Transmembrane protein 209 yes no 3 0.00050394 72.315 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 3472300 0 0 632510 622040 1102500 1115300 7115 654 7217 31720;31721;31722;31723 20926;20927;20928 20928 3 SQAPGQPGASQWGSR RAEPRDSKSQAPGQPG GASQWGSRVVPNAANG K S Q S R V 2 1 0 0 0 3 0 3 0 0 0 0 0 0 2 3 0 1 0 0 0 15 0 1512.707 Q96EP5-2;Q96EP5 Q96EP5-2 195 209 DAZAP1 DAZ-associated protein 1 yes no 2 0.00064458 74.296 By MS/MS By MS/MS By matching By matching By matching By matching 2 1 1 1 1 1 21108000 3332300 3016500 1632400 1848700 3537100 7740600 7116 1382 7218 31724;31725;31726;31727;31728;31729;31730 20929;20930;20931 20931 3 SQAQATISFPK ________________ QATISFPKRKLSRALN R S Q P K R 2 0 0 0 0 2 0 0 0 1 0 1 0 1 1 2 1 0 0 0 0 11 0 1176.6139 Q99741 Q99741 6 16 CDC6 Cell division control protein 6 homolog yes yes 2 6.1909E-05 100.93 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 8829800 1329800 0 1474400 691450 1602700 3731400 7117 1431 7219 31731;31732;31733;31734;31735 20932 20932 1 SQASTTVDINTQVEKEVPPGSAIIHIK SPGIHLERSQASTTVD GSAIIHIKKHQVSVEG R S Q I K K 2 0 1 1 0 2 2 1 1 4 0 2 0 0 2 3 3 0 0 3 0 27 1 2861.5135 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7;Q14676-4 Q14676 513 539 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3 0.010534 33.649 By matching By MS/MS By matching By matching By matching By matching 1 11527000 0 11527000 0 0 0 0 7118 1109 7220 31736 20933 20933 1 SQAVQTNGTQPLSK ________________ NGTQPLSKTWELSLYE M S Q S K T 1 0 1 0 0 3 0 1 0 0 1 1 0 0 1 2 2 0 0 1 0 14 0 1457.7474 Q99496;B3KRH1 Q99496 2 15 RNF2 E3 ubiquitin-protein ligase RING2 yes no 2 5.4696E-42 120.32 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 14112000 2910500 2039900 2526400 1211600 1964000 3459100 7119 1424 7221 31737;31738;31739;31740;31741;31742;31743 20934;20935;20936;20937;20938;20939;20940 20936 6 SQCALEEYVR HVESLQEKSQCALEEY CALEEYVRSQYPNQPT K S Q V R S 1 1 0 0 1 1 2 0 0 0 1 0 0 0 0 1 0 0 1 1 0 10 0 1253.571 P24468;P24468-3;P24468-2;P10589 P10589 341 350 NR2F2;NR2F1 COUP transcription factor 2;COUP transcription factor 1 no no 2 0.0084831 82.494 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 5541800 596080 2839000 1660200 446610 0 0 7120 871;819 7222 31744;31745;31746;31747 20941 20941 1 SQDATFSPGSEQAEKSPGPIVSR SPRRMMTRSQDATFSP SPGPIVSRTRSWDSSS R S Q S R T 2 1 0 1 0 2 2 2 0 1 0 1 0 1 3 5 1 0 0 1 0 23 1 2374.1401 C9J0I9;Q86WB0-2;Q86WB0 C9J0I9 286 308 ZC3HC1 Nuclear-interacting partner of ALK yes no 3 0.0093351 39.171 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 12289000 0 2582100 2017500 1961900 982180 4745200 7121 222 7223 31748;31749;31750;31751;31752 20942;20943 20943 2 SQDDEIGDGTTGVVVLAGALLEEAEQLLDR KLMVELSKSQDDEIGD EAEQLLDRGIHPIRIA K S Q D R G 3 1 0 4 0 2 4 4 0 1 5 0 0 0 0 1 2 0 0 3 0 30 0 3112.5412 B7ZAR1;E9PCA1;P48643 B7ZAR1 59 88 CCT5 T-complex protein 1 subunit epsilon yes no 3 2.2254E-63 101.87 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 381090000 0 370480000 0 0 10615000 0 7122 202 7224 31753;31754 20944;20945;20946;20947 20945 4 SQDKDVNEGETSDGVRK SSGINSTKSQDKDVNE ETSDGVRKSVHKVFAS K S Q R K S 0 1 1 3 0 1 2 2 0 0 0 2 0 0 0 2 1 0 0 2 0 17 2 1862.8606 Q9Y5Q9-2;Q9Y5Q9 Q9Y5Q9-2 64 80 GTF3C3 General transcription factor 3C polypeptide 3 yes no 3;4 4.0246E-07 90.872 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 2 6888200 0 1895800 1299600 0 0 3692800 7123 1656 7225 31755;31756;31757;31758 20948;20949;20950 20948 3 SQDSMSSDTARTSPVTAR AEEYSRLRSQDSMSSD RTSPVTARTLETLIRL R S Q A R T 2 2 0 2 0 1 0 0 0 0 0 0 1 0 1 5 3 0 0 1 0 18 1 1895.8643 P25205;Q7Z6P5;E9PF11 P25205 599 616 MCM3 DNA replication licensing factor MCM3 yes no 3 0.0017567 56.339 By MS/MS By matching By matching By matching By matching By MS/MS 2 1 1 1 1 1 14796000 2123800 2129700 1617100 1037900 3151500 4735800 7124 873 7226 31759;31760;31761;31762;31763;31764;31765 20951;20952;20953;20954 20952 4 SQDVQRESEPLREK SQEKSSGKSQDVQRES ESEPLREKVTQLLPQN K S Q E K V 0 2 0 1 0 2 3 0 0 0 1 1 0 0 1 2 0 0 0 1 0 14 2 1699.8489 Q9UNY4;Q9UNY4-2 Q9UNY4 244 257 TTF2 Transcription termination factor 2 yes no 3;4 0.017677 54.871 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 2 2 2 1 2 14727000 278400 2329700 4022100 3064200 1282200 3750700 7125 1618 7227 31766;31767;31768;31769;31770;31771;31772;31773;31774;31775 20955;20956;20957 20955 3 SQEATEAAPSCVGDMADTPRDAGLK PVAEATPRSQEATEAA TPRDAGLKQAPASRNE R S Q L K Q 5 1 0 3 1 1 2 2 0 0 1 1 1 0 2 2 2 0 0 1 0 25 1 2576.1483 Q9UHD8-3;Q9UHD8-7;Q9UHD8-2;Q9UHD8-5;Q9UHD8 Q9UHD8-3 74 98 SEPT9 Septin-9 yes no 3 0.0028852 43.233 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 3405900 2069100 0 0 0 0 1336800 7126 1593 7228 31776;31777 20958;20959 20959 2 SQEEDQPIIIK QNDDDTIKSQEEDQPI EDQPIIIKRKRGRPRK K S Q I K R 0 0 0 1 0 2 2 0 0 3 0 1 0 0 1 1 0 0 0 0 0 11 0 1298.6718 Q8NFC6 Q8NFC6 2862 2872 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 0.0033321 83.182 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4011400 0 0 0 710820 329230 2971300 7127 1325 7229 31778;31779;31780 20960;20961 20961 2 SQEEPKDTFEHDPSESIDEFNK EESPLKSKSQEEPKDT ESIDEFNKSSATSGDI K S Q N K S 0 0 1 3 0 1 5 0 1 1 0 2 0 2 2 3 1 0 0 0 0 22 1 2607.1249 Q9NYF8-2;Q9NYF8;Q9NYF8-4;E9PK09;E9PQN2;E9PKI6;E9PJA7;Q9NYF8-3;E9PK91 Q9NYF8-2 181 202 BCLAF1 Bcl-2-associated transcription factor 1 no no 3;4 8.5411E-134 138.04 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 2 206740000 122380000 3998300 65897000 0 6204800 8258500 7128 1563;452 7230 31781;31782;31783;31784;31785;31786;31787;31788;31789;31790 20962;20963;20964;20965;20966;20967;20968;20969;20970 20970 9 SQEITTNSEQRCPLK KILSSVRKSQEITTNS SEQRCPLKKESACVRL K S Q L K K 0 1 1 0 1 2 2 0 0 1 1 1 0 0 1 2 2 0 0 0 0 15 1 1789.8629 Q99741 Q99741 127 141 CDC6 Cell division control protein 6 homolog yes yes 3 0.00262 63.292 By MS/MS By matching By matching By matching By matching By MS/MS 2 1 1 1 1 1 9530800 2063400 1232900 2024700 893000 1432900 1883900 7129 1431 7231 31791;31792;31793;31794;31795;31796;31797 20971;20972;20973 20972 3 SQEQEVLER MDERPKTRSQEQEVLE QEQEVLERGGRFTRSQ R S Q E R G 0 1 0 0 0 2 3 0 0 0 1 0 0 0 0 1 0 0 0 1 0 9 0 1116.5411 E7EQT4;Q9UKV3;Q9UKV3-5 E7EQT4 288 296 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.018678 70.552 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 3784100 0 1168700 345950 316720 0 1952700 7130 364 7232 31798;31799;31800;31801 20974;20975 20974 2 SQFGSASHSEAVQEVRK IQKYLTPKSQFGSASH EAVQEVRKDSVSKDID K S Q R K D 2 1 0 0 0 2 2 1 1 0 0 1 0 1 0 4 0 0 0 2 0 17 1 1845.8969 Q8IYW5 Q8IYW5 233 249 RNF168 E3 ubiquitin-protein ligase RNF168 yes yes 3 0.0017254 64.454 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 30206000 5258400 8208300 0 2918800 4140000 9680300 7131 1292 7233 31802;31803;31804;31805;31806;31807 20976;20977;20978;20979;20980;20981;20982 20982 7 SQGCSEQVLTVLK RLSHCRSRSQGCSEQV EQVLTVLKTVSLLDEN R S Q L K T 0 0 0 0 1 2 1 1 0 0 2 1 0 0 0 2 1 0 0 2 0 13 0 1447.7341 P78527;E7EUY0;P78527-2 P78527 3290 3302 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 3.1691E-15 107.35 By matching By MS/MS By matching By matching By matching By matching 1 1 90824000 0 84230000 0 6594600 0 0 7132 1012 7234 31808;31809 20983 20983 1 SQGDMQDLNGNNQSVTR DFNYKTLKSQGDMQDL GNNQSVTRQKMQQLEQ K S Q T R Q 0 1 3 2 0 3 0 2 0 0 1 0 1 0 0 2 1 0 0 1 0 17 0 1862.8177 G8JLH9;P40763-2;P40763 G8JLH9 83 99 STAT3 Signal transducer and activator of transcription 3 yes no 2 0.035736 36.504 By matching By matching By matching By matching By matching By MS/MS 1 685440 0 0 0 0 0 685440 7133 602 7235 31810 20984 20984 1 SQGDNNVSLVEEFRK GRRTYHTRSQGDNNVS SLVEEFRKTLCALWQG R S Q R K T 0 1 2 1 0 1 2 1 0 0 1 1 0 1 0 2 0 0 0 2 0 15 1 1720.838 Q6JHV3;H0YMI4;Q9Y6I4;B3KMX7;H0YLB7;H0YKU8;F5H1A6 Q6JHV3 188 202 USP3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 3 0.0021365 55.011 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 13026000 0 2126900 0 1003300 0 9896000 7134 628 7236 31811;31812;31813 20985;20986 20986 1 SQGGVQPIPSQGGK SDSSRTSKSQGGVQPI PIPSQGGKLEIAGTVV K S Q G K L 0 0 0 0 0 3 0 4 0 1 0 1 0 0 2 2 0 0 0 1 0 14 0 1338.6892 Q9NZB2;Q9NZB2-6 Q9NZB2 933 946 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 yes no 2 0.0011058 76.311 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 5792800 0 755620 1136900 707080 1586300 1606900 7135 1566 7237 31814;31815;31816;31817;31818 20987;20988;20989;20990 20987 4 SQHDILQMICSK SKRVSISRSQHDILQM ILQMICSKRRSGASEA R S Q S K R 0 0 0 1 1 2 0 0 1 2 1 1 1 0 0 2 0 0 0 0 0 12 0 1458.6959 P46013;F5H4V4;P46013-2;E7EN66 P46013 634 645 MKI67 Antigen KI-67 no no 2;3 8.0074E-118 157.33 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 202950000 21928000 34596000 14701000 24031000 10679000 97016000 7136 919;920 7238 31819;31820;31821;31822;31823;31824;31825 20991;20992;20993;20994;20995;20996 20995 5 SQIHDIVLVGGSTR LRDAKLDKSQIHDIVL VLVGGSTRIPKIQKLL K S Q T R I 0 1 0 1 0 1 0 2 1 2 1 0 0 0 0 2 1 0 0 2 0 14 0 1480.7998 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;A8K7Q2 P11142 329 342 HSPA8 Heat shock cognate 71 kDa protein yes no 3 0.0022936 62.357 By MS/MS By matching By matching By matching By matching By matching 1 1018700 1018700 0 0 0 0 0 7137 824 7239 31826 20997 20997 1 SQIHDIVLVGGSTRIPK LRDAKLDKSQIHDIVL GGSTRIPKIQKLLQDF K S Q P K I 0 1 0 1 0 1 0 2 1 3 1 1 0 0 1 2 1 0 0 2 0 17 1 1819.0316 P11142;E9PKE3;P11142-2;E9PNE6;E9PN89;A8K7Q2 P11142 329 345 HSPA8 Heat shock cognate 71 kDa protein yes no 3;4 8.4855E-45 116.61 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 159910000 17038000 20402000 28583000 17012000 7237200 69642000 7138 824 7240 31827;31828;31829;31830;31831;31832;31833;31834;31835;31836;31837;31838 20998;20999;21000;21001;21002;21003;21004;21005;21006;21007;21008;21009 21001 12 SQKENVLQYCRK VKKELDVKSQKENVLQ NVLQYCRKSGLQTDYA K S Q R K S 0 1 1 0 1 2 1 0 0 0 1 2 0 0 0 1 0 0 1 1 0 12 2 1551.7828 P46013;F5H4V4 P46013 252 263 MKI67 Antigen KI-67 yes no 3 2.1493E-51 136.81 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 50116000 4464300 9091300 22173000 0 5193400 9193900 7139 919 7241 31839;31840;31841;31842;31843 21010;21011;21012 21011 3 SQLDRTVCISDAGACGETLSVTSEENSLVKK ESEPVAQKSQLDRTVC EENSLVKKKERSLSSG K S Q K K K 2 1 1 2 2 1 3 2 0 1 3 2 0 0 0 5 3 0 0 3 0 31 2 3353.6079 O95243-2 O95243-2 282 312 MBD4 Methyl-CpG-binding domain protein 4 no no 4 4.3261E-06 48.607 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 50552000 0 38638000 0 11915000 0 0 7140 769 7242 31844;31845 21013;21014 21013 1 SQLLAPPPPSAPPGNK RPSQGHSKSQLLAPPP PSAPPGNKTTVQQEPL K S Q N K T 2 0 1 0 0 1 0 1 0 0 2 1 0 0 6 2 0 0 0 0 0 16 0 1569.8515 P49750-3;P49750;P49750-4;F8VU51 P49750-3 242 257 YLPM1 YLP motif-containing protein 1 yes no 2 0.00017801 71.354 By MS/MS By matching By matching By matching By matching By matching 1 1 1 2231000 1039800 0 0 0 877250 313890 7141 941 7243 31846;31847;31848 21015 21015 0 SQLLKFVEK LGDPGTAKSQLLKFVE QLLKFVEKCSPIGVYT K S Q E K C 0 0 0 0 0 1 1 0 0 0 2 2 0 1 0 1 0 0 0 1 0 9 1 1090.6386 P33992;B1AHB1;E7EQY5 P33992 388 396 MCM5 DNA replication licensing factor MCM5 yes no 2 1.0544E-41 127.83 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 27332000 2637800 2773100 17409000 2216500 0 2295900 7142 892 7244 31849;31850;31851;31852;31853 21016;21017;21018 21018 3 SQLQGPSSSEYWK GSQPRAERSQLQGPSS PSSSEYWKEWPSAESP R S Q W K E 0 0 0 0 0 2 1 1 0 0 1 1 0 0 1 4 0 1 1 0 0 13 0 1495.6943 P39880-2;P39880;P39880-3;P39880-4;P39880-5;P39880-6 P39880-2 846 858 CUX1 Homeobox protein cut-like 1 yes no 2 0.0013716 89.44 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 6964200 0 1276300 1634800 1030000 3023000 0 7143 906 7245 31854;31855;31856;31857 21019;21020;21021 21021 3 SQNEAVCEGLR LRQLEMQKSQNEAVCE EAVCEGLRTQIRELWD K S Q L R T 1 1 1 0 1 1 2 1 0 0 1 0 0 0 0 1 0 0 0 1 0 11 0 1261.5721 H9KV59;O43663;O43663-2 H9KV59 230 240 PRC1 Protein regulator of cytokinesis 1 no no 2 0.02083 55.261 By matching By MS/MS By matching By matching By matching By matching 1 530610 0 530610 0 0 0 0 7144 676 7246 31858 21022 21022 1 SQNGEFMTHKLK KKGFTEVKSQNGEFMT EFMTHKLKHTENTFSR K S Q L K H 0 0 1 0 0 1 1 1 1 0 1 2 1 1 0 1 1 0 0 0 0 12 1 1418.6976 Q05682-5;E9PGZ1;Q05682-4;F5H1Z9;E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;C9J813 Q05682-5 232 243 CALD1 Caldesmon yes no 3 0.015072 55.04 By matching By matching By matching By matching By matching By MS/MS 1 1112300 0 0 0 0 0 1112300 7145 396 7247 31859 21023 21023 1 SQPAASTLESK CLRSRKTKSQPAASTL AASTLESKSVQRVTRS K S Q S K S 2 0 0 0 0 1 1 0 0 0 1 1 0 0 1 3 1 0 0 0 0 11 0 1117.5615 P46013;F5H4V4;P46013-2 P46013 3207 3217 MKI67 Antigen KI-67 no no 2 0.0070178 69.216 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 2 1 1 1 1 68637000 5943500 14543000 25273000 3547000 3536600 15793000 7146 919;920 7248 31860;31861;31862;31863;31864;31865;31866 21024;21025;21026 21024 3 SQPDPVDTPTSSKPQSK KTTKIACRSQPDPVDT TSSKPQSKRSLRKVDV R S Q S K R 0 0 0 2 0 2 0 0 0 0 0 2 0 0 4 4 2 0 0 1 0 17 1 1797.8745 P46013;F5H4V4;P46013-2 P46013 1496 1512 MKI67 Antigen KI-67 no no 3 0.0016964 59.728 By MS/MS By matching By matching By matching By MS/MS By MS/MS 2 1 1 1 1 1 256440000 39167000 35734000 57193000 19187000 31072000 74088000 7147 919;920 7249 31867;31868;31869;31870;31871;31872;31873 21027;21028;21029;21030 21029 4 SQPERDWVLNEFR AMCIHGDKSQPERDWV DWVLNEFRSGKAPILI K S Q F R S 0 2 1 1 0 1 2 0 0 0 1 0 0 1 1 1 0 1 0 1 0 13 1 1674.8114 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 374 386 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 3 0.0085254 57.267 By matching By MS/MS By matching By matching By matching By matching 1 52770000 0 52770000 0 0 0 0 7148 1361;629 7250 31874 21031 21031 1 SQPGQKPAASPRPR ________________ PAASPRPRRAAAARRT M S Q P R R 2 2 0 0 0 2 0 1 0 0 0 1 0 0 4 2 0 0 0 0 0 14 2 1475.7957 G5E9D3;P20810-5;E7ESM9;P20810-7;P20810-6;F8W7E0;E9PSG1 G5E9D3 2 15 CAST Calpastatin yes no 3 0.029436 41.825 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 25213000 4176600 3779300 0 3231400 6114300 7911300 7149 375 7251 31875;31876;31877;31878;31879 21032 21032 1 SQPLERPLGTADPRLDK PSSSPSVRSQPLERPL TADPRLDKSIGAASPR R S Q D K S 1 2 0 2 0 1 1 1 0 0 3 1 0 0 3 1 1 0 0 0 0 17 2 1892.0116 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 2078 2094 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 4 0.029164 37.182 By matching By matching By MS/MS By matching By matching By matching 1 1 1 6933000 1384600 0 1619400 0 0 3929000 7150 1404 7252 31880;31881;31882 21033 21033 1 SQPLISLTEHTK ARRLNSRRSQPLISLT ISLTEHTKSIASAYFS R S Q T K S 0 0 0 0 0 1 1 0 1 1 2 1 0 0 1 2 2 0 0 0 0 12 0 1352.73 Q9H967 Q9H967 485 496 WDR76 WD repeat-containing protein 76 yes yes 2;3 0.0047799 63.602 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 1 2 1 12310000 0 2663300 2384400 1685900 3344300 2232400 7151 1504 7253 31883;31884;31885;31886;31887;31888;31889;31890 21034;21035;21036;21037 21036 4 SQPNHTPAGPPGPSSNPVSNGK PPSTRITRSQPNHTPA SNPVSNGKETRRSSKR R S Q G K E 1 0 3 0 0 1 0 3 1 0 0 1 0 0 6 4 1 0 0 1 0 22 0 2126.0141 Q9BQ15-2;Q9BQ15 Q9BQ15-2 83 104 NABP2 SOSS complex subunit B1 yes no 3 1.2381E-07 82.635 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 14745000 0 4333500 2846600 1220100 2531800 3813100 7152 1436 7254 31891;31892;31893;31894;31895 21038;21039;21040;21041;21042 21042 5 SQPNTMTSLQNSK AENIQDTKSQPNTMTS MTSLQNSKKVNPKQGT K S Q S K K 0 0 2 0 0 2 0 0 0 0 1 1 1 0 1 3 2 0 0 0 0 13 0 1434.6773 Q96QE3;Q96QE3-2 Q96QE3 177 189 ATAD5 ATPase family AAA domain-containing protein 5 yes no 2 0.010347 55.196 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5677100 0 1059600 1439000 0 797180 2381300 7153 1415 7255 31896;31897;31898;31899 21043 21043 1 SQPPARLISGEEHFSSK CKISSYCRSQPPARLI GEEHFSSKKCLAWFYE R S Q S K K 1 1 0 0 0 1 2 1 1 1 1 1 0 1 2 4 0 0 0 0 0 17 1 1868.9381 E9PQV9;Q9BTE7;H0YCN4 E9PQV9 33 49 DCUN1D5 DCN1-like protein 5 yes no 4 0.014138 49.537 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 24136000 10026000 7796400 0 3644600 0 2668900 7154 468 7256 31900;31901;31902;31903 21044;21045 21044 0 SQPPARLISGEEHFSSKK CKISSYCRSQPPARLI EEHFSSKKCLAWFYEY R S Q K K C 1 1 0 0 0 1 2 1 1 1 1 2 0 1 2 4 0 0 0 0 0 18 2 1997.033 E9PQV9;Q9BTE7;H0YCN4 E9PQV9 33 50 DCUN1D5 DCN1-like protein 5 yes no 4 0.023629 36.775 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 8648800 0 2039200 1713400 2008700 1594700 1292800 7155 468 7257 31904;31905;31906;31907;31908 21046 21046 1 SQPVHILAVRR SPRQRVQRSQPVHILA VHILAVRRLQEEDQQF R S Q R R L 1 2 0 0 0 1 0 0 1 1 1 0 0 0 1 1 0 0 0 2 0 11 1 1274.7571 Q13322-3;Q13322-2;Q13322-4;Q13322 Q13322-3 54 64 GRB10 Growth factor receptor-bound protein 10 yes no 3 0.011604 54.198 By matching By matching By matching By matching By MS/MS By matching 1 1 2498200 0 0 0 0 1394100 1104100 7156 1077 7258 31909;31910 21047 21047 1 SQQCQGNELTRPSASSQEK KRDFSEIKSQQCQGNE PSASSQEKSSGKSQDV K S Q E K S 1 1 1 0 1 4 2 1 0 0 1 1 0 0 1 4 1 0 0 0 0 19 1 2133.9709 Q9UNY4;Q9UNY4-2 Q9UNY4 221 239 TTF2 Transcription termination factor 2 yes no 3 0.017311 38.546 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 6491600 0 1981400 0 1761100 0 2749100 7157 1618 7259 31911;31912;31913 21048;21049;21050;21051 21051 4 SQQERDWVLNEFK AMGIHGDKSQQERDWV DWVLNEFKHGKAPILI K S Q F K H 0 1 1 1 0 2 2 0 0 0 1 1 0 1 0 1 0 1 0 1 0 13 1 1677.8111 P17844;E7ETL9 P17844 376 388 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 2;3 2.5574E-90 143.97 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 2 2 303910000 0 86961000 0 24570000 0 192380000 7158 853 7260 31914;31915;31916;31917;31918 21052;21053;21054;21055;21056 21055 4 SQQQPTPVTPK YSTRRVTRSQQQPTPV QPTPVTPKKYPLRQTR R S Q P K K 0 0 0 0 0 3 0 0 0 0 0 1 0 0 3 1 2 0 0 1 0 11 0 1209.6354 O95251-2;G5E9K7;O95251 O95251-2 80 90 KAT7 Histone acetyltransferase KAT7 yes no 2 0.00023773 98.898 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 4134500 377290 736540 748440 395530 0 1876700 7159 597 7261 31919;31920;31921;31922;31923 21057;21058 21058 2 SQQTSFQSSPCNKSPK HPSGSKPKSQQTSFQS SPCNKSPKSHGLQNQP K S Q P K S 0 0 1 0 1 3 0 0 0 0 0 2 0 1 2 5 1 0 0 0 0 16 1 1809.8316 Q12986;Q12986-2;F5GXD0;Q12986-3 Q12986 82 97 NFX1 Transcriptional repressor NF-X1 yes no 3 0.00029458 83.856 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 17984000 2633900 2790200 2914200 2845400 2950700 3849500 7160 1066 7262 31924;31925;31926;31927;31928;31929 21059;21060;21061 21059 3 SQRNTAGAQPQDDSIGGR NPGGSLRRSQRNTAGA QDDSIGGRSHLGQAKH R S Q G R S 2 2 1 2 0 3 0 3 0 1 0 0 0 0 1 2 1 0 0 0 0 18 1 1856.8725 Q14CA3;Q14669;B4DYJ6;G5E9G6;C9JLD7;C9JLJ5;C9JSX9;F8W9P3 Q14CA3 16 33 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 3 0.025584 37.157 By matching By matching By matching By matching By matching By MS/MS 1 1 1922900 0 570740 0 0 0 1352200 7161 1122 7263 31930;31931 21062 21062 1 SQRYESLKGVDPK RNGIKKPRSQRYESLK SLKGVDPKFLRNMRFA R S Q P K F 0 1 0 1 0 1 1 1 0 0 1 2 0 0 1 2 0 0 1 1 0 13 2 1505.7838 P47914 P47914 26 38 RPL29 60S ribosomal protein L29 yes yes 3 0.0087416 64.534 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 1 8830300 1325400 572720 756450 672920 2505900 2997000 7162 930 7264 31932;31933;31934;31935;31936;31937 21063 21063 1 SQSAAVTPSSTTSSTR SSSSSSSRSQSAAVTP SSTTSSTRATPAPSAP R S Q T R A 2 1 0 0 0 1 0 0 0 0 0 0 0 0 1 6 4 0 0 1 0 16 0 1566.7485 Q16186;E9PEC0 Q16186 211 226 ADRM1 Proteasomal ubiquitin receptor ADRM1 yes no 2 0.015399 42.314 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3153300 0 699540 436840 0 635930 1381000 7163 1151 7265 31938;31939;31940;31941 21064 21064 1 SQSEPSEQDGVLDLSTK PLDLTVRKSQSEPSEQ GVLDLSTKKSPCAGST K S Q T K K 0 0 0 2 0 2 2 1 0 0 2 1 0 0 1 4 1 0 0 1 0 17 0 1818.8483 Q96JN0-2;Q96JN0 Q96JN0-2 72 88 LCOR Ligand-dependent corepressor yes no 2 7.9151E-110 138.77 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 6343200 3633400 0 2181300 528400 0 0 7164 1400 7266 31942;31943;31944 21065;21066 21066 1 SQSLLTFSTKSPEEK SQFYFLTKSQSLLTFS STKSPEEKLTPTSKQL K S Q E K L 0 0 0 0 0 1 2 0 0 0 2 2 0 1 1 4 2 0 0 0 0 15 1 1680.857 Q8IWA0 Q8IWA0 662 676 WDR75 WD repeat-containing protein 75 yes yes 3 0.0016128 68.413 By matching By matching By matching By matching By matching By MS/MS 1 1305200 0 0 0 0 0 1305200 7165 1279 7267 31945 21067;21068 21067 2 SQSRGNSQLLLS PPPAKRKKSQSRGNSQ GNSQLLLS________ K S Q L S - 0 1 1 0 0 2 0 1 0 0 3 0 0 0 0 4 0 0 0 0 0 12 1 1288.6735 P46087;Q3KQS4;P46087-2 P46087 801 812 NOP2 Putative ribosomal RNA methyltransferase NOP2 yes no 2 0.010618 65.842 By MS/MS By matching By matching By matching By MS/MS By matching 2 1 1 1 9590700 3428000 1512200 0 0 3189200 1461400 7166 923 7268 31946;31947;31948;31949;31950 21069;21070 21070 2 SQSSHSYDDSTLPLIDRNQK VNLNNASRSQSSHSYD PLIDRNQKSDDNNYST R S Q Q K S 0 1 1 3 0 2 0 0 1 1 2 1 0 0 1 5 1 0 1 0 0 20 1 2290.0826 O60716-32;O60716-31;O60716-29;O60716-27;O60716-30;O60716-28;O60716-26;O60716-25;O60716-24;O60716-23;O60716-21;O60716-19;O60716-22;O60716-20;O60716-16;O60716-18;O60716-15;O60716-17;O60716-13;O60716-11;O60716-14;O60716-12;O60716-10;O60716-8;O60716-9;E9PIE5;O60716-7;O60716-5;C9JZR2;O60716-3;O60716-6;F8WA43;O60716-4;O60716-2;O60716;H0YC95 O60716-32 530 549 CTNND1 Catenin delta-1 yes no 4 0.0025011 49.708 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 7271400 0 0 2560900 848550 824700 3037300 7167 275 7269 31951;31952;31953;31954 21071;21072 21071 2 SQSSIVPEEEQAANKGEEK EAAEQAERSQSSIVPE AANKGEEKKDDENIPM R S Q E K K 2 0 1 0 0 2 5 1 0 1 0 2 0 0 1 3 0 0 0 1 0 19 1 2058.9706 C0IMW5;B4DFR4;Q969G3-2;B4DGM3;Q969G3;H7C048;H7BXG8;H7C3F6 C0IMW5 279 297 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes no 3 0.0043316 47.088 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 14474000 0 0 2998800 3041800 4341400 4092200 7168 85 7270 31955;31956;31957;31958 21073;21074;21075 21075 3 SQSSIVPEEEQAANKGEEKK EAAEQAERSQSSIVPE ANKGEEKKDDENIPME R S Q K K D 2 0 1 0 0 2 5 1 0 1 0 3 0 0 1 3 0 0 0 1 0 20 2 2187.0655 C0IMW5;B4DFR4;Q969G3-2;B4DGM3;Q969G3;H7C048;H7BXG8;H7C3F6 C0IMW5 279 298 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes no 4 0.0023674 49.036 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 2 2 10551000 1141500 879040 1389800 696640 2391000 4052900 7169 85 7271 31959;31960;31961;31962;31963;31964;31965;31966 21076;21077 21076 2 SQTSQAVTGGHTQIQAGSHTETVEQDR TEIHGQGRSQTSQAVT TETVEQDRSQTVSHGG R S Q D R S 2 1 0 1 0 5 2 3 2 1 0 0 0 0 0 3 5 0 0 2 0 27 0 2852.3285 Q9UBG3 Q9UBG3 336 362 CRNN Cornulin yes yes 3 0.012772 32.065 By matching By matching By matching By matching By MS/MS By matching 1 1471200 0 0 0 0 1471200 0 7170 1582 7272 31967 21078 21078 1 SQTTLQEQLKK QFAANSERSQTTLQEQ TLQEQLKKNKGFRRFV R S Q K K N 0 0 0 0 0 3 1 0 0 0 2 2 0 0 0 1 2 0 0 0 0 11 1 1302.7143 Q8N4T4-2;Q8N4T4-4;Q8N4T4;Q8N4T4-3 Q8N4T4-2 77 87 ARHGEF39 Rho guanine nucleotide exchange factor 39 yes no 3 0.011491 54.343 By matching By matching By matching By matching By matching By MS/MS 1 663690 0 0 0 0 0 663690 7171 1299 7273 31968 21079 21079 1 SQVDAQLLTVQK GEQVLGLKSQVDAQLL AQLLTVQKLEEKERAL K S Q Q K L 1 0 0 1 0 3 0 0 0 0 2 1 0 0 0 1 1 0 0 2 0 12 0 1328.73 O75150-4;H3BP71;O75150;F8W8Z4;F6SYU7 O75150-4 719 730 RNF40 E3 ubiquitin-protein ligase BRE1B yes no 2 0.0024262 74.649 By matching By matching By matching By matching By matching By MS/MS 1 1 4189000 0 1139400 0 0 0 3049500 7172 634 7274 31969;31970 21080 21080 1 SQVFSTAADGQTQVEIK NTTIPTKKSQVFSTAA GQTQVEIKVCQGEREM K S Q I K V 2 0 0 1 0 3 1 1 0 1 0 1 0 1 0 2 2 0 0 2 0 17 0 1807.8952 B7Z4V2;P38646;F5H3L8 B7Z4V2 455 471 HSPA9 Stress-70 protein, mitochondrial yes no 2 0.014898 40.968 By MS/MS By matching By matching By matching By matching By matching 1 2149900 2149900 0 0 0 0 0 7173 187 7275 31971 21081 21081 1 SQVPAAQPTAETKPATAAVPTSQSVK PSQNNIQKSQVPAAQP VPTSQSVKHETALVNP K S Q V K H 6 0 0 0 0 3 1 0 0 0 0 2 0 0 4 3 4 0 0 3 0 26 1 2564.3446 Q9UKY1;H0YB50 Q9UKY1 429 454 ZHX1 Zinc fingers and homeoboxes protein 1 yes no 3 0.00010796 50.364 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 2 20367000 0 4404400 3185200 719850 0 12058000 7174 1604 7276 31972;31973;31974;31975;31976 21082;21083;21084;21085;21086 21086 5 SQVVAGTNYFIK VFKAVSFKSQVVAGTN AGTNYFIKVHVGDEDF K S Q I K V 1 0 1 0 0 1 0 1 0 1 0 1 0 1 0 1 1 0 1 2 0 12 0 1325.698 P04080 P04080 45 56 CSTB Cystatin-B yes yes 2 2.5968E-193 176.32 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 275600000 0 46319000 35601000 30698000 66373000 96610000 7175 786 7277 31977;31978;31979;31980;31981 21087;21088;21089;21090;21091;21092 21089 6 SQWVAPSSVVLHDEGQNEEDVEK VAVELLPKSQWVAPSS QNEEDVEKEEETERML K S Q E K E 1 0 1 2 0 2 4 1 1 0 1 1 0 0 1 3 0 1 0 4 0 23 0 2581.1932 G3V1J5;Q9Y2L1-2;Q9Y2L1;F2Z2C0 G3V1J5 138 160 DIS3 Exosome complex exonuclease RRP44 yes no 3 8.766E-85 123.17 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 58451000 10903000 10694000 17867000 18986000 0 0 7176 577 7278 31982;31983;31984;31985 21093;21094;21095;21096 21095 4 SQYEQLAEQNRK TQLLNNMRSQYEQLAE QLAEQNRKDAEAWFNE R S Q R K D 1 1 1 0 0 3 2 0 0 0 1 1 0 0 0 1 0 0 1 0 0 12 1 1492.727 P13645;CON__P13645 P13645 323 334 KRT10 Keratin, type I cytoskeletal 10 yes no 2;3 2.6883E-18 113.67 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 2 2 2 2 2 93264000 1758500 34920000 0 22008000 9761600 24816000 + 7177 298 7279 31986;31987;31988;31989;31990;31991;31992;31993;31994;31995 21097;21098;21099;21100;21101 21100 5 SQYPNQPSRFGK CALEEYVRSQYPNQPS NQPSRFGKLLLRLPSL R S Q G K L 0 1 1 0 0 2 0 1 0 0 0 1 0 1 2 2 0 0 1 0 0 12 1 1407.6895 P10589 P10589 358 369 NR2F1 COUP transcription factor 1 yes yes 3 0.0055191 63.966 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4700400 0 1589000 1332100 0 0 1779200 7178 819 7280 31996;31997;31998 21102 21102 1 SQYPNQPTRFGK CALEEYVRSQYPNQPT NQPTRFGKLLLRLPSL R S Q G K L 0 1 1 0 0 2 0 1 0 0 0 1 0 1 2 1 1 0 1 0 0 12 1 1421.7052 P24468;P24468-3;P24468-2 P24468 351 362 NR2F2 COUP transcription factor 2 yes no 3 0.0065773 62.799 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2521000 0 0 533450 0 577950 1409600 7179 871 7281 31999;32000;32001 21103 21103 1 SRAEAALEEESR YLAYINAKSRAEAALE AALEEESRQRQSRMEK K S R S R Q 3 2 0 0 0 0 4 0 0 0 1 0 0 0 0 2 0 0 0 0 0 12 1 1346.6426 C0IMW5;B4DFR4;Q969G3-2;B4DGM3;Q969G3 C0IMW5 112 123 SMARCE1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes no 3 0.013175 56.569 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 6668500 0 1386300 795240 0 1958700 2528300 7180 85 7282 32002;32003;32004;32005 21104;21105;21106;21107 21104 4 SRCPDGSTCCELPSGK SVMCPDARSRCPDGST CCELPSGKYGCCPMPN R S R G K Y 0 1 0 1 3 0 1 2 0 0 1 1 0 0 2 3 1 0 0 0 0 16 1 1809.7444 P28799-2;P28799 P28799-2 213 228 GRN Granulins;Acrogranin;Paragranulin;Granulin-1;Granulin-2;Granulin-3;Granulin-4;Granulin-5;Granulin-6;Granulin-7 yes no 3 0.00046148 82.709 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 2909500 796910 984830 0 0 0 1127800 7181 885 7283 32006;32007;32008 21108;21109;21110 21109 2 SRDATPPVSPINMEDQER PQTVPEARSRDATPPV INMEDQERIKVERKRL R S R E R I 1 2 1 2 0 1 2 0 0 1 0 0 1 0 3 2 1 0 0 1 0 18 1 2040.9535 P17275 P17275 251 268 JUNB Transcription factor jun-B yes yes 3 0.0034301 49.924 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 6897800 1608800 907840 0 929470 2485800 965880 7182 848 7284 32009;32010;32011;32012;32013 21111;21112;21113 21112 3 SRDLLVQQASQCLSK EEPEMDPKSRDLLVQQ QASQCLSKLVQIASRT K S R S K L 1 1 0 1 1 3 0 0 0 0 3 1 0 0 0 3 0 0 0 1 0 15 1 1731.8938 H3BQZ7;Q1KMD3 H3BQZ7 507 521 hCG_2044799;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 3 0.00018013 87.429 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 14942000 5724000 1752700 0 1833100 0 5632100 7183 640 7285 32014;32015;32016;32017 21114;21115;21116 21115 3 SREDAGDNDDTEGAIGVR EHGEKKKRSREDAGDN TEGAIGVRNKVAGGKM R S R V R N 2 2 1 4 0 0 2 3 0 1 0 0 0 0 0 1 1 0 0 1 0 18 1 1875.8195 Q9H0S4;G5E955 Q9H0S4 424 441 DDX47 Probable ATP-dependent RNA helicase DDX47 yes no 3 1.6385E-05 88.385 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 8675400 619200 1685800 1235200 1076300 1487600 2571200 7184 1481 7286 32018;32019;32020;32021;32022;32023 21117;21118;21119;21120;21121;21122 21118 6 SREDAGDNDDTEGAIGVRNK EHGEKKKRSREDAGDN GAIGVRNKVAGGKMKK R S R N K V 2 2 2 4 0 0 2 3 0 1 0 1 0 0 0 1 1 0 0 1 0 20 2 2117.9574 Q9H0S4;G5E955 Q9H0S4 424 443 DDX47 Probable ATP-dependent RNA helicase DDX47 yes no 3;4 0.00010288 72.359 By MS/MS By matching By matching By matching By MS/MS By MS/MS 2 2 2 2 2 2 19264000 3193400 3996000 3808400 2391100 3303200 2572400 7185 1481 7287 32024;32025;32026;32027;32028;32029;32030;32031;32032;32033;32034;32035 21123;21124;21125;21126;21127 21127 5 SRFFCSSDSTDCVSNK AVVVPGTRSRFFCSSD STDCVSNKVSIQPLDE R S R N K V 0 1 1 2 2 0 0 0 0 0 0 1 0 2 0 5 1 0 0 1 0 16 1 1895.7778 Q9UQ84-4;Q9UQ84 Q9UQ84-4 504 519 EXO1 Exonuclease 1 yes no 3 0.00057424 72.583 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 6124800 297420 1584700 754630 951130 773740 1763200 7186 1624 7288 32036;32037;32038;32039;32040;32041 21128;21129 21128 2 SRFTPELQPK QKVEPAGRSRFTPELQ FTPELQPKASQSRKRS R S R P K A 0 1 0 0 0 1 1 0 0 0 1 1 0 1 2 1 1 0 0 0 0 10 1 1201.6455 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7;Q14676-4 Q14676 1797 1806 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 2;3 0.0088891 79.659 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 2 2 2 2 48168000 8670100 3546100 5061800 4877100 9701200 16312000 7187 1109 7289 32042;32043;32044;32045;32046;32047;32048;32049;32050;32051;32052 21130;21131;21132;21133;21134;21135;21136 21131 7 SRGEQEGDEEEEGHIVDAEAEEGDADASDAK DNAGELGRSRGEQEGD DADASDAKRKEKQEEE R S R A K R 5 1 0 5 0 1 9 4 1 1 0 1 0 0 0 2 0 0 0 1 0 31 1 3273.3301 B9ZVN9;O95602 B9ZVN9 1386 1416 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 yes no 4 0.0053064 30.895 By matching By MS/MS By matching By matching By matching By matching 1 854780 0 854780 0 0 0 0 7188 218 7290 32053 21137 21137 1 SRGLFSANDWQCK IGKTLAEKSRGLFSAN SANDWQCKTCSNVNWA K S R C K T 1 1 1 1 1 1 0 1 0 0 1 1 0 1 0 2 0 1 0 0 0 13 1 1567.7202 O95218-2;O95218 O95218-2 60 72 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes no 3 0.0016255 80.371 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1795000 0 466260 0 0 0 1328800 7189 765 7291 32054;32055 21138;21139 21139 2 SRGSGEQDWVNRPK LSAEGAGKSRGSGEQD QDWVNRPKTVRDTLLA K S R P K T 0 2 1 1 0 1 1 2 0 0 0 1 0 0 1 2 0 1 0 1 0 14 2 1614.7863 Q7Z5L9-2;Q7Z5L9 Q7Z5L9-2 290 303 IRF2BP2 Interferon regulatory factor 2-binding protein 2 yes no 3 0.023516 52.966 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 5473000 294420 798920 756600 454180 1440000 1728900 7190 1254 7292 32056;32057;32058;32059;32060;32061 21140;21141;21142 21140 3 SRGSGGLGGACGGAGFGSR FSSVSVSRSRGSGGLG GGAGFGSRSLYGLGGS R S R S R S 2 2 0 0 1 0 0 9 0 0 1 0 0 1 0 3 0 0 0 0 0 19 1 1666.7594 P02538;CON__P02538;P04259;CON__P04259;F5H6G5 P02538 41 59 KRT6A;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6B no no 3 0.00048257 65.416 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 103870000 1394400 24655000 19740000 0 29988000 28095000 + 7191 287;788 7293 32062;32063;32064;32065;32066 21143;21144;21145;21146 21144 4 SRGSGGLGGACGGAGFGSRSLYGLGGSK FSSVSVSRSRGSGGLG LYGLGGSKRISIGGGS R S R S K R 2 2 0 0 1 0 0 12 0 0 3 1 0 1 0 5 0 0 1 0 0 28 2 2529.2143 P02538;CON__P02538;P04259;CON__P04259;F5H6G5 P02538 41 68 KRT6A;KRT6B Keratin, type II cytoskeletal 6A;Keratin, type II cytoskeletal 6B no no 3;4 9.3131E-18 67.496 By matching By MS/MS By matching By MS/MS By matching By matching 2 2 34057000 0 14458000 0 19599000 0 0 + 7192 287;788 7294 32067;32068;32069;32070 21147;21148;21149 21147 3 SRHENTSQVPLQESR KSSSQVNRSRHENTSQ QVPLQESRTRKRRGSR R S R S R T 0 2 1 0 0 2 2 0 1 0 1 0 0 0 1 3 1 0 0 1 0 15 1 1766.866 P20930;CON__P20930 P20930 274 288 FLG Filaggrin yes no 3 0.0016463 68.329 By matching By matching By matching By matching By matching By MS/MS 1 5897700 0 0 0 0 0 5897700 + 7193 301 7295 32071 21150 21150 1 SRIPAGERPTICGECGK QGPPKIPRSRIPAGER TICGECGKSFRQSSDL R S R G K S 1 2 0 0 2 0 2 3 0 2 0 1 0 0 2 1 1 0 0 0 0 17 2 1886.9091 Q96MX3 Q96MX3 183 199 ZNF48 Zinc finger protein 48 yes yes 3;4 0.0019961 67.846 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 2 2 2 2 2 32916000 4758100 4758300 5694700 1709700 10056000 5938900 7194 1408 7296 32072;32073;32074;32075;32076;32077;32078;32079;32080;32081;32082;32083 21151;21152;21153;21154;21155;21156;21157 21155 6 SRLAAVVSACK GPDAQVDRSRLAAVVS AAVVSACKQLHRAGLL R S R C K Q 3 1 0 0 1 0 0 0 0 0 1 1 0 0 0 2 0 0 0 2 0 11 1 1160.6336 P78527;E7EUY0;P78527-2 P78527 1446 1456 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.017063 69.864 By matching By matching By matching By matching By MS/MS By matching 1 1 1 2344500 0 0 765700 254700 1324100 0 7195 1012 7297 32084;32085;32086 21158 21158 1 SRLSEQELEALELRER QNMDIYRRSRLSEQEL EALELREREMKYRDRA R S R E R E 1 3 0 0 0 1 5 0 0 0 4 0 0 0 0 2 0 0 0 0 0 16 2 1957.0229 Q59HE6;H0YGC0;P52756 Q59HE6 372 387 RBM5 RNA-binding protein 5 yes no 4 0.0023008 56.514 By matching By matching By matching By MS/MS By matching By matching 1 2230600 0 0 0 2230600 0 0 7196 620 7298 32087 21159 21159 1 SRNDKEPFFVK ________________ DKEPFFVKFLKSSDNS M S R V K F 0 1 1 1 0 0 1 0 0 0 0 2 0 2 1 1 0 0 0 1 0 11 2 1365.7041 Q92547 Q92547 2 12 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 2;3 0.0047376 76.332 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 2 2 38383000 5802200 7191300 0 1230200 6128500 18031000 7197 1351 7299 32088;32089;32090;32091;32092;32093;32094 21160;21161;21162;21163 21163 4 SRNLEEAAAAEQGGGCDQVDSSPVPR AAAGSLDRSRNLEEAA VDSSPVPRYRVNAKKL R S R P R Y 4 2 1 2 1 2 3 3 0 0 1 0 0 0 2 3 0 0 0 2 0 26 1 2699.2205 Q9Y2U8 Q9Y2U8 331 356 LEMD3 Inner nuclear membrane protein Man1 yes yes 3 0.0014844 49.835 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 28230000 0 3662300 3955700 3740100 9163200 7708300 7198 1638 7300 32095;32096;32097;32098;32099 21164;21165;21166;21167;21168;21169 21167 6 SRNPVASPTQPSGTEK PLMSAFARSRNPVASP TQPSGTEKGLVTEGSG R S R E K G 1 1 1 0 0 1 1 1 0 0 0 1 0 0 3 3 2 0 0 1 0 16 1 1654.8275 O43435-2;O43435;O43435-3 O43435-2 321 336 TBX1 T-box transcription factor TBX1 yes no 3 2.3591E-10 86.411 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 15195000 1361700 1579700 2147200 1875700 3945600 4285000 7199 716 7301 32100;32101;32102;32103;32104;32105 21170;21171;21172;21173;21174 21172 4 SRNTDEMVELR EEEQAFKRSRNTDEMV TDEMVELRILLQSKNA R S R L R I 0 2 1 1 0 0 2 0 0 0 1 0 1 0 0 1 1 0 0 1 0 11 1 1348.6405 P61978-3;P61978-2;B4DFF1;P61978;Q5T6W5;Q5T6W2 P61978-3 36 46 HNRNPK Heterogeneous nuclear ribonucleoprotein K yes no 2;3 0.0047603 75.788 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 2 20782000 1710600 5355600 1756700 1441000 1598400 8919800 7200 984 7302 32106;32107;32108;32109;32110;32111;32112;32113 21175;21176;21177;21178;21179;21180;21181;21182 21179 8 SRPFTVAASFQSTSVKSPK RSSSLKERSRPFTVAA STSVKSPKTVSPPIRK R S R P K T 2 1 0 0 0 1 0 0 0 0 0 2 0 2 2 5 2 0 0 2 0 19 2 2024.0691 F8VQE1;Q9UHB6-2;B4DN52;Q9UHB6;Q9UHB6-4;F8VS07;Q9UHB6-3 F8VQE1 427 445 LIMA1 LIM domain and actin-binding protein 1 yes no 3;4 0.0027057 62.002 By MS/MS By matching By matching By matching By matching By MS/MS 2 1 1 2 8157400 2686300 872910 0 892490 0 3705700 7201 107 7303 32114;32115;32116;32117;32118;32119 21183;21184;21185;21186 21183 4 SRPQGLTEAEQR KLQRQRLRSRPQGLTE GLTEAEQRELEQEAKE R S R Q R E 1 2 0 0 0 2 2 1 0 0 1 0 0 0 1 1 1 0 0 0 0 12 1 1370.6902 Q00653-3;Q00653-4;Q00653 Q00653-3 161 172 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes no 3 0.0018431 77.185 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 11571000 1540900 1812700 1598200 1495100 0 5124500 7202 1021 7304 32120;32121;32122;32123;32124 21187;21188;21189;21190 21188 4 SRPQGLTEAEQRELEQEAK KLQRQRLRSRPQGLTE RELEQEAKELKKVMDL R S R A K E 2 2 0 0 0 3 5 1 0 0 2 1 0 0 1 1 1 0 0 0 0 19 2 2198.0927 Q00653-3;Q00653-4;Q00653 Q00653-3 161 179 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes no 3 0.0044199 54.768 By MS/MS By matching By matching By matching By matching By matching 1 1 1 4819900 1793500 0 1498700 0 1527700 0 7203 1021 7305 32125;32126;32127 21191 21191 1 SRQNPQSPPQDSSVTSK STTTRQRRSRQNPQSP QDSSVTSKRNIKKGAV R S R S K R 0 1 1 1 0 3 0 0 0 0 0 1 0 0 3 5 1 0 0 1 0 17 1 1841.8868 E7ERH6;Q9UBN7;C9JEF4;C9J172;E9PEH1;E7EP63;E7ER52;A6NDI8;E7EPS2 E7ERH6 16 32 HDAC6 Histone deacetylase 6 yes no 3 0.00067299 82.349 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 38259000 5216800 4601100 8355200 4218200 6575500 9292300 7204 370 7306 32128;32129;32130;32131;32132;32133 21192;21193;21194;21195 21194 4 SRQSSVSFRSGGSR ________________ SFRSGGSRSFSTASAI M S R S R S 0 3 0 0 0 1 0 2 0 0 0 0 0 1 0 6 0 0 0 1 0 14 2 1496.7444 P13647;CON__P13647;F8VV57;E7EU87;F8VU69;CON__Q922U2;F8W0C6 P13647 2 15 KRT5 Keratin, type II cytoskeletal 5 yes no 3 0.0024322 64.244 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 12635000 1305600 1271300 0 8792700 630210 635640 + 7205 299 7307 32134;32135;32136;32137;32138 21196 21196 1 SRQSTLYSFFPKSPALSDANK ________________ PALSDANKASARASRE M S R N K A 2 1 1 1 0 1 0 0 0 0 2 2 0 2 2 5 1 0 1 0 0 21 2 2343.1859 P52701;B4DF41;F5H769;P52701-2;E7ER38;F8W7G9;F8WAX8 P52701 2 22 MSH6 DNA mismatch repair protein Msh6 yes no 3 0.016355 46.786 By matching By matching By matching By MS/MS By matching By matching 1 0 0 0 0 0 0 0 7206 959 7308 32139 21197 21197 1 SRQTPTHPLTPR ESRHSASKSRQTPTHP PTHPLTPRARKRLELG K S R P R A 0 2 0 0 0 1 0 0 1 0 1 0 0 0 3 1 3 0 0 0 0 12 1 1389.7477 Q13415 Q13415 221 232 ORC1 Origin recognition complex subunit 1 yes yes 3 0.0057944 63.662 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 22326000 0 5615800 0 2509800 3412300 10788000 7207 1080 7309 32140;32141;32142;32143 21198;21199;21200 21200 3 SRQTPTHPLTPRAR ESRHSASKSRQTPTHP HPLTPRARKRLELGNL K S R A R K 1 3 0 0 0 1 0 0 1 0 1 0 0 0 3 1 3 0 0 0 0 14 2 1616.8859 Q13415 Q13415 221 234 ORC1 Origin recognition complex subunit 1 yes yes 4 0.037292 39.006 By matching By matching By matching By MS/MS By matching By matching 1 208970 0 0 0 208970 0 0 7208 1080 7310 32144 21201 21201 1 SRSDIDVNAAAGAK SLPGSLQRSRSDIDVN VNAAAGAKAHHAAGQS R S R A K A 4 1 1 2 0 0 0 1 0 1 0 1 0 0 0 2 0 0 0 1 0 14 1 1373.6899 O75122-2;B3KR06;E7ENG2;E9PBA6;F5H3X0;E3W994;O75122;F5H604;E7ERI8;E7EW49 O75122-2 374 387 CLASP2 CLIP-associating protein 2 yes no 3 0.0032077 70.272 By matching By matching By matching By matching By MS/MS By matching 1 1 814640 0 0 0 305800 508840 0 7209 73 7311 32145;32146 21202 21202 0 SRSDIDVNAAASAK STTGSLQRSRSDIDVN VNAAASAKSKVSSSSG R S R A K S 4 1 1 2 0 0 0 0 0 1 0 1 0 0 0 3 0 0 0 1 0 14 1 1403.7005 B7ZLX3;H0Y5T1;F5H2E2;F5GWM7;Q7Z460-2;E7EUA5;F5GWS0;Q7Z460-3;F8WA11;Q7Z460 B7ZLX3 598 611 CLASP1 CLIP-associating protein 1 yes no 3 0.001913 66.674 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 2 1 4328500 850330 550500 713740 240480 957090 1016400 7210 211 7312 32147;32148;32149;32150;32151;32152;32153 21203;21204 21204 2 SRSLAAQEPASVLEEAR RCAAPQIRSRSLAAQE ASVLEEARLRLHVSAV R S R A R L 4 2 0 0 0 1 3 0 0 0 2 0 0 0 1 3 0 0 0 1 0 17 1 1812.933 Q13415 Q13415 476 492 ORC1 Origin recognition complex subunit 1 yes yes 3 0.0077233 59.733 By matching By matching By MS/MS By matching By matching By matching 1 4031100 0 0 4031100 0 0 0 7211 1080 7313 32154 21205 21205 0 SRSNVQPTAAPGQK ________________ PTAAPGQKVMENSSGT M S R Q K V 2 1 1 0 0 2 0 1 0 0 0 1 0 0 2 2 1 0 0 1 0 14 1 1439.7481 B4DNM4;C7G535;Q96GD4 B4DNM4 2 15 AURKB Aurora kinase B yes yes 2 0.0013892 75.911 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 8792000 0 1946100 2463800 785650 979920 2616400 7212 111 7314 32155;32156;32157;32158;32159 21206 21206 1 SRSQGCSEQVLTVLK YCRLSHCRSRSQGCSE EQVLTVLKTVSLLDEN R S R L K T 0 1 0 0 1 2 1 1 0 0 2 1 0 0 0 3 1 0 0 2 0 15 1 1690.8672 P78527;E7EUY0;P78527-2 P78527 3288 3302 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 0.0038726 55.851 By matching By matching By matching By matching By matching By MS/MS 1 1 1 14292000 0 0 0 1456000 5175100 7661400 7213 1012 7315 32160;32161;32162 21207 21207 1 SRSVLQPSQQK ________________ VLQPSQQKLAEKLTIL M S R Q K L 0 1 0 0 0 3 0 0 0 0 1 1 0 0 1 3 0 0 0 1 0 11 1 1256.6837 Q9Y2A7;Q9Y2A7-2 Q9Y2A7 2 12 NCKAP1 Nck-associated protein 1 yes no 2 0.010361 67.385 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 11465000 1591200 1935300 3314200 1353400 1915600 1355200 7214 1630 7316 32163;32164;32165;32166;32167;32168 21208;21209;21210 21210 3 SRSVLREWYAHNPYPSPR TSYCFKEKSRSVLREW HNPYPSPREKRELAEA K S R P R E 1 3 1 0 0 0 1 0 1 0 1 0 0 0 3 3 0 1 2 1 0 18 2 2214.1083 Q9NPC8 Q9NPC8 135 152 SIX2 Homeobox protein SIX2 yes yes 4 0.020863 37.687 By matching By matching By matching By matching By matching By MS/MS 1 5459800 0 0 0 0 0 5459800 7215 1525 7317 32169 21211 21211 1 SRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSR KPTSRTTRSRTNMSSV VTPEPTSRATRGRKNR R S R S R A 1 2 2 0 0 1 4 0 0 1 1 1 1 0 8 7 6 0 0 3 0 38 2 4048.0059 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38 Q14676 1353 1390 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 4 4.8454E-12 35.835 By MS/MS By matching By matching By matching By matching By matching 1 3459500 3459500 0 0 0 0 0 7216 1109 7318 32170 21212 21212 1 SRTVLCGTCGQPADK DPAEYNLRSRTVLCGT TCGQPADKASASGSGA R S R D K A 1 1 0 1 2 1 0 2 0 0 1 1 0 0 1 1 2 0 0 1 0 15 1 1648.7661 P02545;P02545-3;Q6UYC3;D6RAQ3;E7EUI9 P02545 583 597 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.0027746 64.454 By matching By matching By matching By matching By matching By MS/MS 1 1 1 9658300 1307800 0 2047200 0 0 6303300 7217 783 7319 32171;32172;32173 21213 21213 1 SRVRPCVVYGGADIGQQIR EARKFSYRSRVRPCVV ADIGQQIRDLERGCHL R S R I R D 1 3 0 1 1 2 0 3 0 2 0 0 0 0 1 1 0 0 1 3 0 19 2 2130.1116 O00571;O00571-2;B4DLU5;B4DXX7;O15523 O00571 293 311 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 4 0.00095274 60.307 By matching By matching By matching By matching By matching By MS/MS 1 1 2694600 523920 0 0 0 0 2170700 7218 693 7320 32174;32175 21214 21214 1 SRWNQDTMEQK FPSKKRKRSRWNQDTM NQDTMEQKTVIPGMPT R S R Q K T 0 1 1 1 0 2 1 0 0 0 0 1 1 0 0 1 1 1 0 0 0 11 1 1421.6358 Q15637-6;Q15637-4;Q15637-3;Q15637-2;Q15637;Q14820;F8WEV5 Q15637-6 20 30 SF1 Splicing factor 1 no no 2;3 4.1938E-20 121.68 By matching By matching By matching By MS/MS By matching By MS/MS 2 1 2 4891000 0 0 1285300 1283500 0 2322200 7219 1141 7321 32176;32177;32178;32179;32180 21215;21216;21217;21218 21217 4 SRYEQVDLVGK KVAKKYMKSRYEQVDL EQVDLVGKMTQKAATT K S R G K M 0 1 0 1 0 1 1 1 0 0 1 1 0 0 0 1 0 0 1 2 0 11 1 1292.6725 F5H3H6;Q9BQ39 F5H3H6 343 353 DDX50 ATP-dependent RNA helicase DDX50 yes no 2 0.029864 63.091 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 6770000 686690 980680 806860 570070 902990 2822800 7220 515 7322 32181;32182;32183;32184;32185;32186 21219 21219 1 SSAEVIAQAR YITKVMSKSSAEVIAQ AEVIAQARKKGTVVYG K S S A R K 3 1 0 0 0 1 1 0 0 1 0 0 0 0 0 2 0 0 0 1 0 10 0 1030.5407 B4DR31;Q16555 B4DR31 223 232 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 2 0.016563 66.56 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 963110 0 391830 0 0 0 571280 7221 118 7323 32187;32188 21220;21221 21221 2 SSAEVIAQARK YITKVMSKSSAEVIAQ EVIAQARKKGTVVYGE K S S R K K 3 1 0 0 0 1 1 0 0 1 0 1 0 0 0 2 0 0 0 1 0 11 1 1158.6357 B4DR31;Q16555 B4DR31 223 233 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 2 3.5176E-41 133.89 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 9274500 885770 2127800 2284200 608780 761470 2606500 7222 118 7324 32189;32190;32191;32192;32193;32194 21222;21223;21224 21224 3 SSAPSRVPPLFVPQGTSERK NAHDIKNKSSAPSRVP PQGTSERKDSSGSVSP K S S R K D 1 2 0 0 0 1 1 1 0 0 1 1 0 1 4 4 1 0 0 2 0 20 2 2139.1437 Q9H0J9;G5E9U9;H7C4L8 Q9H0J9 237 256 PARP12 Poly [ADP-ribose] polymerase 12 yes no 3 0.023592 42.981 By matching By matching By matching By matching By matching By MS/MS 1 1 2331600 0 436730 0 0 0 1894900 7223 1480 7325 32195;32196 21225 21225 1 SSAQLQTNYPSSDNSLYTNAK VRALEKARSSAQLQTN NSLYTNAKGSTISAFD R S S A K G 2 0 3 1 0 2 0 0 0 0 2 1 0 0 1 5 2 0 2 0 0 21 0 2288.0557 P61244-2;P61244;G3V5L1;G3V302 P61244-2 98 118 MAX Protein max yes no 2 0.016509 37.683 By MS/MS By matching By matching By matching By matching By matching 1 2030600 2030600 0 0 0 0 0 7224 981 7326 32197 21226 21226 1 SSAQNKQVDENSLISTKEEPPVLER ESLLARGRSSAQNKQV EEPPVLEREAPFLEGP R S S E R E 1 1 2 1 0 2 4 0 0 1 2 2 0 0 2 4 1 0 0 2 0 25 2 2797.4094 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 1054 1078 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 4 1.602E-08 76.156 By matching By MS/MS By matching By matching By matching By matching 1 3516400 0 3516400 0 0 0 0 7225 1404 7327 32198 21227 21227 0 SSASTAVSAAPTEK TSVPENPKSSASTAVS VSAAPTEKEFPKTHSD K S S E K E 4 0 0 0 0 0 1 0 0 0 0 1 0 0 1 4 2 0 0 1 0 14 0 1305.6412 P04150-7;P04150-5;F8W959;P04150-9;P04150-2;P04150-6;P04150-8;P04150-10;P04150;P04150-3 P04150-7 141 154 NR3C1 Glucocorticoid receptor yes no 2 0.0014485 69.261 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 8550800 0 1368300 1372800 1265200 2032100 2512400 7226 561 7328 32199;32200;32201;32202;32203 21228;21229;21230;21231;21232 21230 5 SSDAFTTQHALRQAQMSK ETSPETSRSSDAFTTQ LRQAQMSKELVELNKA R S S S K E 3 1 0 1 0 3 0 0 1 0 1 1 1 1 0 3 2 0 0 0 0 18 1 2005.964 O95239;O95239-2 O95239 507 524 KIF4A Chromosome-associated kinesin KIF4A yes no 3 0.001794 55.782 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 8896700 436960 2685500 708670 584250 1247500 3233800 7227 768 7329 32204;32205;32206;32207;32208;32209 21233;21234 21234 2 SSDFEDSAHLMQPVHNKPVK NWNSSVPRSSDFEDSA PVHNKPVKQGPRYNLH R S S V K Q 1 0 1 2 0 1 1 0 2 0 1 2 1 1 2 3 0 0 0 2 0 20 1 2265.0848 O75319 O75319 215 234 DUSP11 RNA/RNP complex-1-interacting phosphatase yes yes 3 0.00013717 66.977 By matching By matching By matching By matching By matching By MS/MS 1 1909700 0 0 0 0 0 1909700 7228 739 7330 32210 21235;21236 21235 2 SSDLIQHQATHTGEKPYKCPECGK ECRRAFYRSSDLIQHQ YKCPECGKRFGQNHNL R S S G K R 1 0 0 1 2 2 2 2 2 1 1 3 0 0 2 2 2 0 1 0 0 24 2 2770.2803 Q9UEG4 Q9UEG4 274 297 ZNF629 Zinc finger protein 629 yes yes 4 0.0033725 47.472 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 7607600 1733500 0 0 1507600 1458800 2907700 7229 1586 7331 32211;32212;32213;32214 21237 21237 1 SSDQPLTVPVSPK KYQGLEIKSSDQPLTV LTVPVSPKFSTRFHC_ K S S P K F 0 0 0 1 0 1 0 0 0 0 1 1 0 0 3 3 1 0 0 2 0 13 0 1353.714 Q9ULW0;Q96RR5 Q9ULW0 728 740 TPX2;HCA90 Targeting protein for Xklp2 yes no 2 2.0063E-15 109.44 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 2 1 152710000 22389000 26366000 19889000 12155000 22233000 49675000 7230 1611 7332 32215;32216;32217;32218;32219;32220;32221;32222 21238;21239;21240;21241;21242;21243;21244;21245 21241 7 SSDVSWSDTRR ALLSDMVRSSDVSWSD VSWSDTRRTLRKDHRW R S S R R T 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 4 1 1 0 1 0 11 1 1294.5902 O14776-2;O14776;G3V220 O14776-2 892 902 TCERG1 Transcription elongation regulator 1 yes no 3 0.02434 46.406 By matching By MS/MS By matching By matching By MS/MS By matching 1 2 1 1 1 1 5964300 635650 1304200 535810 369800 1485700 1633200 7231 696 7333 32223;32224;32225;32226;32227;32228;32229 21246;21247 21246 2 SSEDQGIKGRIEK SIGTIEQKSSEDQGIK GIKGRIEKAANPSGKK K S S E K A 0 1 0 1 0 1 2 2 0 2 0 2 0 0 0 2 0 0 0 0 0 13 2 1445.7474 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 360 372 DIDO1 Death-inducer obliterator 1 yes no 3 0.0051362 81.709 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 27251000 3124700 4142500 5479400 4639200 4993100 4872500 7232 1447 7334 32230;32231;32232;32233;32234;32235 21248;21249;21250;21251 21249 4 SSEFASIPANSSRPLSNISK SPAVGKAKSSEFASIP RPLSNISKSGRMGPAM K S S S K S 2 1 2 0 0 0 1 0 0 2 1 1 0 1 2 7 0 0 0 0 0 20 1 2091.0596 Q9NYZ3 Q9NYZ3 334 353 GTSE1 G2 and S phase-expressed protein 1 yes yes 3 1.008E-65 121.51 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 175580000 25996000 104980000 0 17675000 0 26933000 7233 1564 7335 32236;32237;32238;32239 21252;21253;21254;21255;21256;21257 21255 6 SSEGSAHNVAYPGIPK KTKVLSSKSSEGSAHN VAYPGIPKLAPQVHNT K S S P K L 2 0 1 0 0 0 1 2 1 1 0 1 0 0 2 3 0 0 1 1 0 16 0 1612.7845 Q03164-2;Q03164;E9PQG7 Q03164-2 2277 2292 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 3 0.0019796 57.288 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 8454200 2369700 1314000 0 1721000 1435700 1613900 7234 464 7336 32240;32241;32242;32243;32244 21258;21259 21259 2 SSEPVVIMK VAPRARGKSSEPVVIM SEPVVIMKRSLRTSAK K S S M K R 0 0 0 0 0 0 1 0 0 1 0 1 1 0 1 2 0 0 0 2 0 9 0 988.52632 P46013;F5H4V4;P46013-2 P46013 3041 3049 MKI67 Antigen KI-67 no no 2 0.0012079 107.57 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 185890000 31829000 19522000 33899000 14280000 30160000 56204000 7235 919;920 7337 32245;32246;32247;32248;32249;32250;32251 21260;21261;21262;21263;21264;21265 21261 6 SSEQILATLKGHTK KNVVVFDKSSEQILAT ATLKGHTKKVTSVVFH K S S T K K 1 0 0 0 0 1 1 1 1 1 2 2 0 0 0 2 2 0 0 0 0 14 1 1511.8308 Q9UMS4 Q9UMS4 252 265 PRPF19 Pre-mRNA-processing factor 19 yes yes 3 1.5281E-12 101.38 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 21519000 4286300 5406700 2640300 1135200 498750 7552100 7236 1613 7338 32252;32253;32254;32255;32256;32257 21266 21266 1 SSEQILATLKGHTKK KNVVVFDKSSEQILAT TLKGHTKKVTSVVFHP K S S K K V 1 0 0 0 0 1 1 1 1 1 2 3 0 0 0 2 2 0 0 0 0 15 2 1639.9257 Q9UMS4 Q9UMS4 252 266 PRPF19 Pre-mRNA-processing factor 19 yes yes 3 0.0026342 77.204 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 8537600 0 2295400 1594600 0 2113300 2534300 7237 1613 7339 32258;32259;32260;32261 21267;21268 21267 2 SSFFSDRGSGSR SRSDSRGKSSFFSDRG SDRGSGSRGRFDDRGR K S S S R G 0 2 0 1 0 0 0 2 0 0 0 0 0 2 0 5 0 0 0 0 0 12 1 1288.5796 O00571;O00571-2;B4DLU5;B4E3C4;B4DLA0 O00571 82 93 DDX3X ATP-dependent RNA helicase DDX3X yes no 3 0.014732 55.314 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 40466000 6462400 7315200 13045000 0 13644000 0 7238 693 7340 32262;32263;32264;32265 21269 21269 1 SSFLASLNPK PTTTQSPKSSFLASLN FLASLNPKTWGRLSTQ K S S P K T 1 0 1 0 0 0 0 0 0 0 2 1 0 1 1 3 0 0 0 0 0 10 0 1062.571 Q14CA3;Q14669;Q14CF1 Q14CA3 1087 1096 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 2 0.01406 68.786 By matching By matching By matching By MS/MS By matching By matching 1 5386900 0 0 0 5386900 0 0 7239 1122 7341 32266 21270 21270 1 SSFNLGTIETK TIVTSENKSSFNLGTI NLGTIETKSASVAPFT K S S T K S 0 0 1 0 0 0 1 1 0 1 1 1 0 1 0 2 2 0 0 0 0 11 0 1195.6085 P49790;F6QR24;Q4LE47 P49790 1046 1056 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 2 2.2639E-86 150.06 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 105350000 43854000 15442000 14157000 7092700 7987700 16819000 7240 531 7342 32267;32268;32269;32270;32271;32272 21271;21272;21273;21274;21275 21275 5 SSFSESALEK ________________ FSESALEKKLSELSNS M S S E K K 1 0 0 0 0 0 2 0 0 0 1 1 0 1 0 4 0 0 0 0 0 10 0 1083.5084 Q9NQG5;E9PQF3;E9PIQ9 Q9NQG5 2 11 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B yes no 2 0.010726 60.691 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 7241 1530 7343 32273 21276 21276 1 SSFSHYSGLKHEDK DRHSGSDRSSFSHYSG SGLKHEDKRGGSGSHN R S S D K R 0 0 0 1 0 0 1 1 2 0 1 2 0 1 0 4 0 0 1 0 0 14 1 1620.7532 Q8NC51;Q8NC51-3 Q8NC51 202 215 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein no no 3;4 0.00072095 86.699 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 2 2 2 2 8859000 0 960610 1837600 502750 1248800 4309300 7242 1316;1317 7344 32274;32275;32276;32277;32278;32279;32280;32281;32282 21277;21278;21279;21280 21277 4 SSFSSDPDEKAQDSK EPARRVSRSSFSSDPD DEKAQDSKAYSKITEG R S S S K A 1 0 0 3 0 1 1 0 0 0 0 2 0 1 1 5 0 0 0 0 0 15 1 1626.7009 P46013;F5H4V4 P46013 127 141 MKI67 Antigen KI-67 yes no 2;3 2.7242E-08 99.069 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 2 2 57715000 5002700 6393100 13615000 3318900 10175000 19210000 7243 919 7345 32283;32284;32285;32286;32287;32288;32289;32290;32291;32292;32293;32294 21281;21282;21283;21284;21285 21282 5 SSFSSDPDEKAQDSKAYSK EPARRVSRSSFSSDPD QDSKAYSKITEGKVSG R S S S K I 2 0 0 3 0 1 1 0 0 0 0 3 0 1 1 6 0 0 1 0 0 19 2 2075.9284 P46013;F5H4V4 P46013 127 145 MKI67 Antigen KI-67 yes no 3 0.00095118 69.979 By MS/MS By matching By MS/MS By matching By matching By MS/MS 2 1 1 1 1 1 19982000 7650600 1064600 5593900 3414200 1198700 1060000 7244 919 7346 32295;32296;32297;32298;32299;32300;32301 21286;21287;21288 21288 3 SSFSSDPDESEGIPLK EPARRVSRSSFSSDPD ESEGIPLKRRRVSFGG R S S L K R 0 0 0 2 0 0 2 1 0 1 1 1 0 1 2 5 0 0 0 0 0 16 0 1693.7683 P46013-2;E7EN66 P46013-2 127 142 MKI67 Antigen KI-67 yes no 2 4.6067E-140 150.37 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 55742000 22756000 0 23745000 2786900 6454200 0 7245 920 7347 32302;32303;32304;32305 21289;21290;21291;21292;21293 21293 5 SSFSSDPDESEGIPLKR EPARRVSRSSFSSDPD SEGIPLKRRRVSFGGH R S S K R R 0 1 0 2 0 0 2 1 0 1 1 1 0 1 2 5 0 0 0 0 0 17 1 1849.8694 P46013-2;E7EN66 P46013-2 127 143 MKI67 Antigen KI-67 yes no 3 0.0021223 50.158 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 7785000 2052100 1319200 1392100 859840 0 2161800 7246 920 7348 32306;32307;32308;32309;32310 21294;21295 21295 1 SSFYPDGGDQETAK PRDESRGRSSFYPDGG GGDQETAKTGKFLKRF R S S A K T 1 0 0 2 0 1 1 2 0 0 0 1 0 1 1 2 1 0 1 0 0 14 0 1500.6369 Q9NYF8-2;Q9NYF8;Q9NYF8-4;E9PK09;E9PQN2;E9PKI6;E9PJA7;H0YF00;Q9NYF8-3;E9PK91 Q9NYF8-2 317 330 BCLAF1 Bcl-2-associated transcription factor 1 no no 2 6.0855E-05 91.712 By MS/MS By MS/MS By matching By matching By matching By matching 2 1 1 1 1 1 88165000 23495000 6562800 11435000 13128000 15992000 17553000 7247 1563;452 7349 32311;32312;32313;32314;32315;32316;32317 21296;21297;21298;21299 21298 4 SSGAASSAPGGGDGAEYK RGGGGESRSSGAASSA GGDGAEYKTLKISELG R S S Y K T 4 0 0 1 0 0 1 5 0 0 0 1 0 0 1 4 0 0 1 0 0 18 0 1567.675 Q96T37-2;Q96T37-3;Q96T37 Q96T37-2 153 170 RBM15 Putative RNA-binding protein 15 yes no 2 0.0040398 48.288 By MS/MS By matching By matching By matching By matching By matching 1 671600 671600 0 0 0 0 0 7248 1421 7350 32318 21300 21300 1 SSGASVTTQPTEFK TILKALFKSSGASVTT TTQPTEFKIKL_____ K S S F K I 1 0 0 0 0 1 1 1 0 0 0 1 0 1 1 3 3 0 0 1 0 14 0 1438.694 Q9BY77;Q9BY77-2 Q9BY77 405 418 POLDIP3 Polymerase delta-interacting protein 3 yes no 2 6.4321E-104 145.61 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 17583000 1646200 2773000 2475900 1064200 2938800 6685200 7249 1465 7351 32319;32320;32321;32322;32323;32324 21301;21302;21303;21304;21305 21303 5 SSGASVTTQPTEFKIKL TILKALFKSSGASVTT PTEFKIKL________ K S S K L - 1 0 0 0 0 1 1 1 0 1 1 2 0 1 1 3 3 0 0 1 0 17 2 1792.9571 Q9BY77;Q9BY77-2 Q9BY77 405 421 POLDIP3 Polymerase delta-interacting protein 3 yes no 3 2.7678E-109 138.28 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 77997000 0 45590000 0 32407000 0 0 7250 1465 7352 32325;32326 21306;21307 21307 2 SSGEIVYCGQVFEKSPLRVK SQLKKMKKSSGEIVYC EKSPLRVKNFGIWLRY K S S V K N 0 1 0 0 1 1 2 2 0 1 1 2 0 1 1 3 0 0 1 3 0 20 2 2282.1729 B4DM74;Q02543 B4DM74 57 76 RPL18A 60S ribosomal protein L18a yes no 3 0.0049394 51.971 By MS/MS By matching By matching By matching By matching By matching 1 7299100 7299100 0 0 0 0 0 7251 104 7353 32327 21308 21308 1 SSGHSSSELSPDAVEK DMKEQSTRSSGHSSSE LSPDAVEKAGMSSNQS R S S E K A 1 0 0 1 0 0 2 1 1 0 1 1 0 0 1 6 0 0 0 1 0 16 0 1615.7326 Q9UQ35;F5GWZ7;Q9UQ35-2;I3L2L6 Q9UQ35 1378 1393 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2;3 0.0019442 68.413 By matching By matching By matching By matching By matching By MS/MS 1 1 2 1 2 2 14335000 1219800 327640 2697600 701930 1558600 7829800 7252 1623 7354 32328;32329;32330;32331;32332;32333;32334;32335;32336 21309;21310 21310 2 SSGISSQNSSTSDGDRSVSSQSSSSVSSQVTTAGSGK SESGNSARSSGISSQN VTTAGSGKASEAEAPD R S S G K A 1 1 1 2 0 3 0 4 0 1 0 1 0 0 0 17 3 0 0 3 0 37 1 3522.579 Q9NXV6 Q9NXV6 193 229 CDKN2AIP CDKN2A-interacting protein yes yes 3 0.0005647 25.393 By matching By matching By matching By matching By MS/MS By matching 1 1 1 14978000 0 5706100 0 5482300 3790000 0 7253 1560 7355 32337;32338;32339 21311 21311 1 SSGKTPETLVPTAPK ATRGRKNRSSGKTPET TLVPTAPKLEPSTSTD R S S P K L 1 0 0 0 0 0 1 1 0 0 1 2 0 0 3 2 3 0 0 1 0 15 1 1511.8195 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38 Q14676 1399 1413 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 2;3 0.00011641 84.508 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 2 2 2 2 2 31028000 4250400 3231400 2826100 2758800 7604400 10357000 7254 1109 7356 32340;32341;32342;32343;32344;32345;32346;32347;32348;32349;32350 21312;21313;21314;21315;21316 21314 4 SSGKTPETLVPTAPKLEPSTSTDQPVTPEPTSQATR ATRGRKNRSSGKTPET EPTSQATRGRTNRSSV R S S T R G 2 1 0 1 0 2 3 1 0 0 2 2 0 0 7 5 8 0 0 2 0 36 2 3734.885 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38 Q14676 1399 1434 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 4 4.442E-08 35.626 By matching By matching By matching By MS/MS By matching By matching 1 4350700 0 0 0 4350700 0 0 7255 1109 7357 32351 21317 21317 1 SSGPTSLFAVTVAPPGARQGQQQAGGDGK AAKEAAGKSSGPTSLF QQAGGDGKTEQKGGDK K S S G K T 4 1 0 1 0 4 0 6 0 0 1 1 0 1 3 3 2 0 0 2 0 29 1 2768.3842 Q00839-2 Q00839-2 187 215 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes yes 3 1.89E-49 96.052 By matching By matching By matching By MS/MS By matching By matching 1 34359000 0 0 0 34359000 0 0 7256 1023 7358 32352 21318 21318 1 SSGPTSLFAVTVAPPGARQGQQQAGGKK AAKEAAGKSSGPTSLF QQQAGGKKKAEGGGGG K S S K K K 4 1 0 0 0 4 0 5 0 0 1 2 0 1 3 3 2 0 0 2 0 28 2 2724.4307 Q00839;B3KX72 Q00839 187 214 HNRNPU Heterogeneous nuclear ribonucleoprotein U yes no 4 2.8306E-49 96.341 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 29140000 0 12832000 0 16308000 0 0 7257 1022 7359 32353;32354 21319;21320 21319 2 SSGPYGGGGQYFAKPR KGGNFGGRSSGPYGGG GQYFAKPRNQGGYGGS R S S P R N 1 1 0 0 0 1 0 5 0 0 0 1 0 1 2 2 0 0 2 0 0 16 1 1627.7743 H0YH80;P09651-3;F8VXY0;F8VRQ1;P09651-2;F8W6I7;P09651;F8VSB5;F8W1S7 H0YH80 156 171 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1 yes no 3 0.0011159 74.649 By MS/MS By matching By matching By matching By MS/MS By MS/MS 2 1 1 1 2 1 18724000 3325800 2805700 1188600 1131000 5795300 4477200 7258 537 7360 32355;32356;32357;32358;32359;32360;32361;32362 21321;21322;21323 21323 3 SSGRSGSMDPSGAHPSVR DPAARMSRSSGRSGSM SGAHPSVRQTPSRQPP R S S V R Q 1 2 0 1 0 0 0 3 1 0 0 0 1 0 2 6 0 0 0 1 0 18 1 1770.8067 Q07666;Q07666-3;Q07666-2;E7ET98 Q07666 14 31 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes no 3;4 1.2759E-13 95.554 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 3 3 2 3 3 3 184050000 18490000 24352000 20502000 16672000 50159000 53876000 7259 1045 7361;7362 32363;32364;32365;32366;32367;32368;32369;32370;32371;32372;32373;32374;32375;32376;32377;32378;32379 21324;21325;21326;21327;21328;21329;21330;21331;21332 21331 127 9 SSGSPYGGGYGSGGGSGGYGSR KGGSFGGRSSGSPYGG GSGGYGSRRF______ R S S S R R 0 1 0 0 0 0 0 11 0 0 0 0 0 0 1 6 0 0 3 0 0 22 0 1909.7827 E7EWI9;E7ERJ4;P51991-2;H7C1J8;P51991 E7EWI9 299 320 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 2 0.0038399 46.595 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 17304000 2832800 6554600 0 0 7916600 0 7260 371;955 7363 32380;32381;32382 21333;21334;21335 21335 3 SSGSPYGGGYGSGGGSGGYGSRRF KGGSFGGRSSGSPYGG GGYGSRRF________ R S S R F - 0 2 0 0 0 0 0 11 0 0 0 0 0 1 1 6 0 0 3 0 0 24 2 2212.9522 E7EWI9;E7ERJ4;P51991-2;H7C1J8;P51991 E7EWI9 299 322 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 3 0.00026248 58.123 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 119370000 28795000 13112000 18097000 35583000 0 23779000 7261 371;955 7364 32383;32384;32385;32386;32387 21336;21337;21338;21339;21340 21339 5 SSGTTAKPLPVVK LNTFLSIKSSGTTAKP AKPLPVVKESSADLLL K S S V K E 1 0 0 0 0 0 0 1 0 0 1 2 0 0 2 2 2 0 0 2 0 13 1 1283.7449 Q5VUA4 Q5VUA4 1381 1393 ZNF318 Zinc finger protein 318 yes yes 3 0.039406 41.684 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4889200 0 0 916740 616830 1709800 1645800 7262 1205 7365 32388;32389;32390;32391 21341 21341 1 SSGYHYGVSACEGCK PCFVCQDKSSGYHYGV VSACEGCKGFFRRSIQ K S S C K G 1 0 0 0 2 0 1 3 1 0 0 1 0 0 0 3 0 0 2 1 0 15 0 1660.661 D6RBI3;B4DSI3;P10826-2;P10826;P10276-2;P10276;A8MUP8;F8W8A4 D6RBI3 95 109 RARB;RARA Retinoic acid receptor beta;Retinoic acid receptor alpha yes no 3 0.00064685 78.69 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 7174300 0 1271100 1730900 438670 531480 3202200 7263 122 7366 32392;32393;32394;32395;32396 21342;21343;21344;21345 21344 4 SSGYHYGVSSCEGCK PCFVCNDKSSGYHYGV VSSCEGCKGFFRRSIQ K S S C K G 0 0 0 0 2 0 1 3 1 0 0 1 0 0 0 4 0 0 2 1 0 15 0 1676.6559 P13631-2;P13631 P13631-2 86 100 RARG Retinoic acid receptor gamma yes no 3 0.0041207 53.168 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2890700 0 0 0 200460 570080 2120100 7264 832 7367 32397;32398;32399 21346 21346 1 SSILAGGQPR LESVGFCRSSILAGGQ ILAGGQPRWTLAVPGR R S S P R W 1 1 0 0 0 1 0 2 0 1 1 0 0 0 1 2 0 0 0 0 0 10 0 984.53524 Q9BYB4;Q9BYB4-2;C9JPQ6 Q9BYB4 118 127 GNB1L Guanine nucleotide-binding protein subunit beta-like protein 1 yes no 2 0.009973 74.533 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 1 1 1 1 13836000 934020 2850300 0 936320 3420000 5695400 7265 1467 7368 32400;32401;32402;32403;32404;32405 21347;21348;21349;21350 21347 4 SSILVQHQRVHTGEKPYK ECGKAFSRSSILVQHQ HTGEKPYKCLECGKAF R S S Y K C 0 1 0 0 0 2 1 1 2 1 1 2 0 0 1 2 1 0 1 2 0 18 2 2106.1334 P17028 P17028 291 308 ZNF24 Zinc finger protein 24 yes yes 4 0.0032562 49.265 By matching By matching By matching By matching By MS/MS By matching 1 1 2648400 0 0 0 1214800 1433700 0 7266 844 7369 32406;32407 21351 21351 1 SSIRQVSDVQK QKSTKEVRSSIRQVSD RQVSDVQKRVQVDVKM R S S Q K R 0 1 0 1 0 2 0 0 0 1 0 1 0 0 0 3 0 0 0 2 0 11 1 1245.6677 Q13263-2;Q13263 Q13263-2 197 207 TRIM28 Transcription intermediary factor 1-beta yes no 3 0.033608 74.962 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 7267 1076 7370 32408 21352 21352 1 SSISETLSGTDTFSSSNNHEK AVLSSPNKSSISETLS SSSNNHEKISSPKVGR K S S E K I 0 0 2 1 0 0 2 1 1 1 1 1 0 1 0 7 3 0 0 0 0 21 0 2226.9877 Q69YH5;E9PEI0 Q69YH5 474 494 CDCA2 Cell division cycle-associated protein 2 yes no 3 1.2969E-05 70.907 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 11817000 0 3358100 3847000 0 0 4611600 7268 1219 7371 32409;32410;32411 21353;21354 21354 2 SSLANYLHK QGLKFRSKSSLANYLH SLANYLHKNGETSLKP K S S H K N 1 0 1 0 0 0 0 0 1 0 2 1 0 0 0 2 0 0 1 0 0 9 0 1031.54 O95243-2 O95243-2 122 130 MBD4 Methyl-CpG-binding domain protein 4 no no 2 0.0071345 89.08 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 3 1 1 1 1 30050000 11890000 0 2617100 3620500 5398400 6524400 7269 769 7372 32412;32413;32414;32415;32416;32417;32418 21355;21356;21357;21358;21359 21357 5 SSLENEPSLGRTQK RKKSSLRKSSLENEPS PSLGRTQKSKSEVIED K S S Q K S 0 1 1 0 0 1 2 1 0 0 2 1 0 0 1 3 1 0 0 0 0 14 1 1544.7794 Q56NI9;E5RFE4 Q56NI9 222 235 ESCO2 N-acetyltransferase ESCO2 yes no 2;3 0.00031653 89.136 By MS/MS By matching By MS/MS By matching By matching By MS/MS 2 1 2 1 1 1 14248000 2008500 981610 4824500 2783000 2266700 1383600 7270 1176 7373 32419;32420;32421;32422;32423;32424;32425;32426 21360;21361;21362 21361 3 SSLGQSASETEEDTVSVSK EEMETDARSSLGQSAS EDTVSVSKKEKNRKRR R S S S K K 1 0 0 1 0 1 3 1 0 0 1 1 0 0 0 6 2 0 0 2 0 19 0 1939.8858 Q13435;E9PPJ0;E9PJ04;H0YCG1 Q13435 302 320 SF3B2 Splicing factor 3B subunit 2 yes no 2 0.0057073 45.436 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2974600 0 449760 1074000 0 0 1450900 7271 1083 7374 32427;32428;32429 21363 21363 1 SSLHTLTKVPK RNLRSSLKSSLHTLTK HTLTKVPKKSLKPRTP K S S P K K 0 0 0 0 0 0 0 0 1 0 2 2 0 0 1 2 2 0 0 1 0 11 1 1209.7081 Q13415 Q13415 449 459 ORC1 Origin recognition complex subunit 1 yes yes 3 0.0051518 73.951 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 29647000 0 5696800 7727400 1809900 4586800 9826100 7272 1080 7375 32430;32431;32432;32433;32434 21364;21365;21366 21366 3 SSLIHQGIR REKASAAKSSLIHQGI SLIHQGIR________ K S S I R - 0 1 0 0 0 1 0 1 1 2 1 0 0 0 0 2 0 0 0 0 0 9 0 1009.5669 B4E1H5;Q12834 B4E1H5 467 475 CDC20 Cell division cycle protein 20 homolog yes no 2 0.0082093 98.048 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 25288000 1438900 4716300 7334200 2338900 2560600 6899600 7273 157 7376 32435;32436;32437;32438;32439;32440 21367;21368;21369;21370 21369 4 SSLLASRYDSPINSASHIPSSK MEKESRERSSLLASRY ASHIPSSKTASLPGYG R S S S K T 2 1 1 1 0 0 0 0 1 2 2 1 0 0 2 8 0 0 1 0 0 22 1 2316.171 O14639-4;O14639-3;O14639-5;Q5JVV3;H0Y3K7;F8WAB1;Q5T6N2;F8WAB0;O14639-2;F8W8M4;A6NKJ2;O14639;Q5T6N4;A6NCD9 O14639-4 254 275 ABLIM1 Actin-binding LIM protein 1 yes no 3 2.6362E-112 135.98 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 40987000 0 14425000 7302800 3706600 2165200 13387000 7274 13 7377 32441;32442;32443;32444;32445 21371;21372;21373;21374;21375 21374 5 SSLLEKGLDGAK APKPRKQRSSLLEKGL EKGLDGAKKAVGGLGK R S S A K K 1 0 0 1 0 0 1 2 0 0 3 2 0 0 0 2 0 0 0 0 0 12 1 1216.6663 P81605;P81605-2 P81605 63 74 DCD Dermcidin;Survival-promoting peptide;DCD-1 no no 2;3 9.1488E-118 159.5 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 52649000 1643200 17295000 14562000 5114400 6735700 7299500 7275 1013;1014 7378 32446;32447;32448;32449;32450;32451;32452;32453;32454;32455;32456 21376;21377;21378;21379;21380;21381;21382;21383;21384;21385 21384 9 SSLLEKGLDGAKK APKPRKQRSSLLEKGL KGLDGAKKAVGGLGKL R S S K K A 1 0 0 1 0 0 1 2 0 0 3 3 0 0 0 2 0 0 0 0 0 13 2 1344.7613 P81605;P81605-2 P81605 63 75 DCD Dermcidin;Survival-promoting peptide;DCD-1 no no 3 0.0039657 78.324 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 7442500 0 1939200 498210 1333400 2229200 1442500 7276 1013;1014 7379 32457;32458;32459;32460;32461 21386;21387;21388;21389 21386 4 SSLNGKGESSLTALER QFKGYRRRSSLNGKGE SSLTALERIEHNGERK R S S E R I 1 1 1 0 0 0 2 2 0 0 3 1 0 0 0 4 1 0 0 0 0 16 1 1647.8428 Q69YH5;E9PEI0 Q69YH5 999 1014 CDCA2 Cell division cycle-associated protein 2 yes no 3 0.0027199 56.121 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4425700 556600 1285500 0 0 203710 2379900 7277 1219 7380 32462;32463;32464;32465 21390 21390 1 SSLSNNECGSLDK GMAEHLEKSSLSNNEC NECGSLDKTSPEMSNS K S S D K T 0 0 2 1 1 0 1 1 0 0 2 1 0 0 0 4 0 0 0 0 0 13 0 1409.6093 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1148 1160 RIF1 Telomere-associated protein RIF1 yes no 2 5.3985E-24 115.24 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 1 39906000 2061300 12155000 12023000 5383200 8284000 0 7278 1201 7381 32466;32467;32468;32469;32470 21391;21392;21393 21393 3 SSLSRHHPEESPLGAK SSRSLSSRSSLSRHHP EESPLGAKFQLSLASY R S S A K F 1 1 0 0 0 0 2 1 2 0 2 1 0 0 2 4 0 0 0 0 0 16 1 1730.87 B1AL16;Q8IX21;B1AL17 B1AL16 220 235 FAM178A Protein FAM178A yes no 4 0.0026041 56.793 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 6574200 0 0 1109500 685250 2335200 2444200 7279 63 7382 32471;32472;32473;32474 21394 21394 1 SSLTVHQRTHTGEKPYECEK CGKAFRQRSSLTVHQR EKPYECEKCGAAFISN R S S E K C 0 1 0 0 1 1 3 1 2 0 1 2 0 0 1 2 3 0 1 1 0 20 2 2386.1336 P13682;B4DUB8 P13682 487 506 ZNF35 Zinc finger protein 35 yes no 4 0.0030916 47.223 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 4873500 0 0 2245500 1486000 1141900 0 7280 835 7383 32475;32476;32477 21395;21396 21396 2 SSLVTPSISK KPEKEEEKSSLVTPSI LVTPSISKEEILESSK K S S S K E 0 0 0 0 0 0 0 0 0 1 1 1 0 0 1 4 1 0 0 1 0 10 0 1017.5706 Q5VUA4 Q5VUA4 1288 1297 ZNF318 Zinc finger protein 318 yes yes 2 0.01406 68.786 By matching By matching By matching By matching By matching By MS/MS 1 1 2228100 0 0 0 0 706770 1521300 7281 1205 7384 32478;32479 21397 21397 1 SSLYEQMGDHK NVRYLWERSSLYEQMG YEQMGDHKMAMDGYRR R S S H K M 0 0 0 1 0 1 1 1 1 0 1 1 1 0 0 2 0 0 1 0 0 11 0 1293.566 Q9Y5Q9-2;Q9Y5Q9 Q9Y5Q9-2 258 268 GTF3C3 General transcription factor 3C polypeptide 3 yes no 2;3 0.00039463 96.171 By matching By matching By matching By matching By matching By MS/MS 1 1 2 4118400 0 652690 0 0 135820 3329900 7282 1656 7385 32480;32481;32482;32483 21398;21399 21399 2 SSPELEDTATSSK KTTKIPCKSSPELEDT EDTATSSKRRPRTRAQ K S S S K R 1 0 0 1 0 0 2 0 0 0 1 1 0 0 1 4 2 0 0 0 0 13 0 1350.6151 P46013;F5H4V4;P46013-2 P46013 2827 2839 MKI67 Antigen KI-67 no no 2 2.1897E-46 125.53 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 1 1 1 1 258990000 41288000 63796000 74930000 31663000 47312000 0 7283 919;920 7386 32484;32485;32486;32487;32488;32489 21400;21401;21402;21403;21404 21402 5 SSPHEVKFQMQRK LVGDISPKSSPHEVKF VKFQMQRKSEGN____ K S S R K S 0 1 0 0 0 2 1 0 1 0 0 2 1 1 1 2 0 0 0 1 0 13 2 1600.8144 B4DZR9;Q9UQR0;B4DRC2;H0Y6S1;Q9UQR0-2 B4DZR9 561 573 SCML2 Sex comb on midleg-like protein 2 yes no 4 0.016341 49.632 By matching By matching By matching By MS/MS By matching By matching 1 1 619930 0 0 200990 418930 0 0 7284 149 7387 32490;32491 21405 21405 1 SSPVPVSDTQK CDSITPSKSSPVPVSD VPVSDTQKLKNLPFKT K S S Q K L 0 0 0 1 0 1 0 0 0 0 0 1 0 0 2 3 1 0 0 2 0 11 0 1143.5772 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;Q76FK4-3;F5GWN9 F5H101 267 277 NOL8 Nucleolar protein 8 yes no 2 0.013912 60.255 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 8145500 0 1341800 1404800 0 2469400 2929500 7285 27 7388 32492;32493;32494;32495 21406 21406 1 SSPVPVSDTQKLK CDSITPSKSSPVPVSD VSDTQKLKNLPFKTSG K S S L K N 0 0 0 1 0 1 0 0 0 0 1 2 0 0 2 3 1 0 0 2 0 13 1 1384.7562 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;Q76FK4-3;F5GWN9 F5H101 267 279 NOL8 Nucleolar protein 8 yes no 2;3 0.0021661 79.089 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 32643000 2901800 7673100 1732500 1039800 10495000 8801000 7286 27 7389 32496;32497;32498;32499;32500;32501;32502;32503;32504;32505 21407;21408;21409;21410;21411;21412;21413 21413 7 SSQEEVRSYSDPPLK HRYIEVFKSSQEEVRS SYSDPPLKFMSVQRPG K S S L K F 0 1 0 1 0 1 2 0 0 0 1 1 0 0 2 4 0 0 1 1 0 15 1 1720.8268 P52597;B4DKS8 P52597 186 200 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 3 0.0027522 64.104 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 114010000 0 26635000 16234000 11589000 16018000 43535000 7287 958 7390 32506;32507;32508;32509;32510 21414;21415;21416;21417;21418 21418 5 SSQESIVCELR LADLPQNKSSQESIVC ESIVCELRCKSVYLGT K S S L R C 0 1 0 0 1 1 2 0 0 1 1 0 0 0 0 3 0 0 0 1 0 11 0 1306.6187 Q9NXV6 Q9NXV6 496 506 CDKN2AIP CDKN2A-interacting protein yes yes 2 0.0004175 96.82 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 2 38550000 4512000 4228000 4952400 1859800 3976000 19021000 7288 1560 7391 32511;32512;32513;32514;32515;32516;32517 21419;21420;21421;21422;21423 21421 5 SSQETPAHSSGQPPRDAK HKPLAKPKSSQETPAH GQPPRDAKLEAKTAKA K S S A K L 2 1 0 1 0 2 1 1 1 0 0 1 0 0 3 4 1 0 0 0 0 18 1 1878.882 Q9NZC9;H7C051;H7BYI2 Q9NZC9 172 189 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 yes no 3 0.025584 37.157 By matching By matching By MS/MS By matching By matching By matching 1 1 1193600 0 363450 830170 0 0 0 7289 1567 7392 32518;32519 21424 21424 1 SSQGSSSSTQSAPSETASASKEK VNTETLNKSSQGSSSS TASASKEKETSAEKSK K S S E K E 3 0 0 0 0 2 2 1 0 0 0 2 0 0 1 10 2 0 0 0 0 23 1 2228.004 Q9ULU4-14;Q2HXV3;Q9ULU4-12;Q9ULU4-13;B7ZM62;H7C4X9;Q9ULU4-8;Q2HXV1;Q9ULU4-9;F8WAN7;Q9ULU4-5;Q9ULU4-10;Q9ULU4-7;E7ETU8;F5H0X3;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;H7C0U2;Q9ULU4;Q9ULU4-11;Q9ULU4-2 Q9ULU4-14 1034 1056 ZMYND8 Protein kinase C-binding protein 1 yes no 3 3.5911E-10 79.467 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 15051000 0 2224900 4475800 917790 2292200 5140000 7290 1160 7393 32520;32521;32522;32523;32524 21425;21426;21427;21428 21425 4 SSQIGSSQLLK TTVTSAQKSSQIGSSQ IGSSQLLKRHVQRTEA K S S L K R 0 0 0 0 0 2 0 1 0 1 2 1 0 0 0 4 0 0 0 0 0 11 0 1146.6245 Q9P2N6-8;F8W894;B4E1W4;E7EU88;Q9P2N6-6;Q9P2N6-2;Q9P2N6-5;Q9P2N6-4;Q9P2N6-3;Q9P2N6 Q9P2N6-8 467 477 KANSL3 KAT8 regulatory NSL complex subunit 3 yes no 2 7.4188E-20 119.03 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 11930000 0 1710300 0 2281100 2173000 5765900 7291 159 7394 32525;32526;32527;32528 21429;21430 21429 2 SSQIGTGDLK CKAGLLSKSSQIGTGD QIGTGDLKILTEPKGS K S S L K I 0 0 0 1 0 1 0 2 0 1 1 1 0 0 0 2 1 0 0 0 0 10 0 1004.5138 Q9Y4C1;F5H4E6;F5H070;F8WE62 Q9Y4C1 372 381 KDM3A Lysine-specific demethylase 3A yes no 2 0.0061222 85.924 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3542600 432720 797220 0 0 0 2312600 7292 516 7395 32529;32530;32531 21431 21431 1 SSQLLEPAVEETTKK GRESKRLKSSQLLEPA AVEETTKKEVKVSSVT K S S K K E 1 0 0 0 0 1 3 0 0 0 2 2 0 0 1 2 2 0 0 1 0 15 1 1658.8727 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 1846 1860 AHCTF1 Protein ELYS yes no 3 0.0043846 48.391 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 7743500 0 2389200 1382300 0 0 3972000 7293 1345 7396 32532;32533;32534 21432;21433 21433 2 SSQPDPDKNPASSK KTAKVACKSSQPDPDK DKNPASSKRRLKTSLG K S S S K R 1 0 1 2 0 1 0 0 0 0 0 2 0 0 3 4 0 0 0 0 0 14 1 1456.6794 P46013;F5H4V4;P46013-2 P46013 1617 1630 MKI67 Antigen KI-67 no no 3 0.0011277 75.589 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 16719000 178270 3960500 11786000 794220 0 0 7294 919;920 7397 32535;32536;32537;32538 21434;21435 21435 2 SSQPQAGSQGPQTFR VAPETKVKSSQPQAGS SQGPQTFRQGVGKYIN K S S F R Q 1 1 0 0 0 4 0 2 0 0 0 0 0 1 2 3 1 0 0 0 0 15 0 1574.7437 Q13356;Q13356-2;H7C2D2 Q13356 463 477 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2;Peptidyl-prolyl cis-trans isomerase yes no 2 9.9338E-05 88.319 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 3572300 621520 0 0 450760 166500 2333600 7295 1079 7398 32539;32540;32541;32542 21436;21437;21438 21436 3 SSQPQAGSQGPQTFRQGVGKYINPAATK VAPETKVKSSQPQAGS YINPAATKRAAEEEPS K S S T K R 3 1 1 0 0 5 0 4 0 1 0 2 0 1 3 3 2 0 1 1 0 28 2 2902.4686 Q13356;H7C2D2 Q13356 463 490 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2;Peptidyl-prolyl cis-trans isomerase yes no 4 4.8129E-07 54.465 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 79675000 46060000 0 29353000 0 4261800 0 7296 1079 7399 32543;32544;32545 21439;21440 21440 2 SSQQPSTPQQAPPGQPQQGTFVAHKEIK AKPPAGGKSSQQPSTP FVAHKEIKLTLLNKAA K S S I K L 2 0 0 0 0 7 1 2 1 1 0 2 0 1 5 3 2 0 0 1 0 28 1 3000.5053 Q86VM9;E7ERS3;H3BRH3 Q86VM9 790 817 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 4 0.00016869 48.331 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 30447000 21541000 2193900 1626600 1624900 3460500 0 7297 372 7400 32546;32547;32548;32549;32550 21441;21442 21442 2 SSQSSSQQFSGIGR SSTTSTGRSSQSSSQQ QQFSGIGRSGQQPQPL R S S G R S 0 1 0 0 0 3 0 2 0 1 0 0 0 1 0 6 0 0 0 0 0 14 0 1454.675 Q92841-1;Q92841;Q92841-2;C9JMU5;G5E9L5;Q9UQL5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 592 605 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 2 5.6474E-172 165.86 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 2 1 177570000 18205000 23889000 19856000 8464600 27861000 79291000 7298 1361;629 7401 32551;32552;32553;32554;32555;32556;32557;32558 21443;21444;21445;21446;21447;21448;21449;21450;21451 21444 9 SSRHFCGGTLISPK PWQVSLRRSSRHFCGG GGTLISPKWVLTAAHC R S S P K W 0 1 0 0 1 0 0 2 1 1 1 1 0 1 1 3 1 0 0 0 0 14 1 1545.7722 CON__P06868 CON__P06868 604 617 yes yes 3 0.012568 49.223 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 3702600 1187800 0 0 0 2514700 0 + 7299 295 7402 32559;32560 21452;21453 21452 2 SSRLGAVPATSGPTTFKQQR ________________ PTTFKQQRSTRIVGAK M S S Q R S 2 2 0 0 0 2 0 2 0 0 1 1 0 1 2 3 3 0 0 1 0 20 2 2088.1076 B4DSM5;G3XAG1;Q96ME7 B4DSM5 2 21 ZNF512 Zinc finger protein 512 yes no 3 0.00010926 71.853 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 14809000 3320800 2574300 3381900 1796700 1744900 1990200 7300 123 7403 32561;32562;32563;32564;32565;32566 21454;21455;21456;21457;21458;21459 21455 5 SSRPGREDVGAAGAR ________________ DVGAAGARRPREPPEQ M S S A R R 3 3 0 1 0 0 1 3 0 0 0 0 0 0 1 2 0 0 0 1 0 15 2 1484.7444 Q8TA86 Q8TA86 2 16 RP9 Retinitis pigmentosa 9 protein yes yes 3 0.0082294 49.149 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 8096800 1224300 815990 573340 922890 2571700 1988600 7301 1333 7404 32567;32568;32569;32570;32571;32572 21460 21460 1 SSSADSLSTTKIK NKVPGLYKSSSADSLS SLSTTKIKPLGPARAS K S S I K P 1 0 0 1 0 0 0 0 0 1 1 2 0 0 0 5 2 0 0 0 0 13 1 1323.6882 Q9UQ84-4;Q9UQ84;H0YAZ2 Q9UQ84-4 744 756 EXO1 Exonuclease 1 yes no 2;3 2.0357E-23 113.52 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 2 1 2 2 9739600 234240 1568900 2812000 735160 1138400 3250800 7302 1624 7405 32573;32574;32575;32576;32577;32578;32579;32580;32581;32582 21461;21462;21463 21461 3 SSSGALRGVCSCVEGGSSGK HHDRKNGRSSSGALRG VEGGSSGKACDPAARQ R S S G K A 1 1 0 0 2 0 1 5 0 0 1 1 0 0 0 6 0 0 0 2 0 20 1 1940.868 F5GX68 F5GX68 1467 1486 DNMT1 Cytosine-specific methyltransferase yes yes 3 0.0089782 41.689 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1396900 0 0 317710 0 301320 777920 7303 487 7406 32583;32584;32585 21464 21464 1 SSSGLLEWESK VFSGKSERSSSGLLEW GLLEWESKSDALETLG R S S S K S 0 0 0 0 0 0 2 1 0 0 2 1 0 0 0 4 0 1 0 0 0 11 0 1221.5877 P14866;A6NIT8 P14866 542 552 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 2 0 199.03 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 1147000000 308270000 228910000 184050000 78260000 121070000 226460000 7304 838 7407 32586;32587;32588;32589;32590;32591;32592 21465;21466;21467;21468;21469;21470 21468 6 SSSGQSSGYTQHGSGSGHSSSYEQHGSR QSSGFGHKSSSGQSSG SYEQHGSRSGQSSRSE K S S S R S 0 1 0 0 0 3 1 6 3 0 0 0 0 0 0 11 1 0 2 0 0 28 0 2825.1622 Q86YZ3;CON__Q86YZ3 Q86YZ3 936 963 HRNR Hornerin yes no 4 0.0073952 32.882 By matching By matching By MS/MS By matching By matching By matching 1 1127900 0 0 1127900 0 0 0 + 7305 308 7408 32593 21471 21471 1 SSSIIGSSSASHTSQATSGANSK RKISSKTKSSSIIGSS ATSGANSKLGIMAPPK K S S S K L 3 0 1 0 0 1 0 2 1 2 0 1 0 0 0 10 2 0 0 0 0 23 0 2151.004 P54132;F5H7R6;H0YNU5 P54132 1373 1395 BLM Bloom syndrome protein yes no 3 2.7172E-84 119.38 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 49444000 8764700 8184700 11570000 5244700 6344900 9335300 7306 965 7409 32594;32595;32596;32597;32598;32599;32600 21472;21473;21474;21475;21476;21477;21478;21479 21477 8 SSSLLIHQAVHTDEKPYK QCGKGFTRSSSLLIHQ HTDEKPYKCDKCGKGF R S S Y K C 1 0 0 1 0 1 1 0 2 1 2 2 0 0 1 3 1 0 1 1 0 18 1 2052.064 Q16600 Q16600 247 264 ZNF239 Zinc finger protein 239 yes yes 4 0.0071389 44.998 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 3249300 0 0 743580 0 827190 1678500 7307 1154 7410 32601;32602;32603 21480;21481 21480 2 SSSPSASLTENEVK SSALGFSKSSSPSASL SLTENEVK________ K S S V K - 1 0 1 0 0 0 2 0 0 0 1 1 0 0 1 5 1 0 0 1 0 14 0 1434.6838 O96028-5 O96028-5 616 629 WHSC1 Histone-lysine N-methyltransferase NSD2 yes yes 2 0.0011147 71.279 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 7135100 0 2510500 1447800 490390 849740 1836600 7308 779 7411 32604;32605;32606;32607;32608 21482;21483 21483 2 SSSPVNVK ________________ SSSPVNVKKLKVSELK M S S V K K 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 3 0 0 0 2 0 8 0 816.43413 Q00839;B3KX72;Q00839-2 Q00839 2 9 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 2 0.03296 52.255 By matching By matching By matching By matching By matching By MS/MS 1 1 2994900 0 1305000 0 0 0 1689900 7309 1022;1023 7412 32609;32610 21484 21484 1 SSSQTSTSQLPSK SVSQLASKSSSQTSTS STSQLPSKSTSQSSES K S S S K S 0 0 0 0 0 2 0 0 0 0 1 1 0 0 1 6 2 0 0 0 0 13 0 1336.647 Q9NXV6 Q9NXV6 400 412 CDKN2AIP CDKN2A-interacting protein yes yes 2 5.8007E-61 136.6 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 15169000 1767000 3068800 5319900 902090 1635100 2475700 7310 1560 7413 32611;32612;32613;32614;32615;32616 21485;21486;21487 21485 3 SSSRGGGGESRSSGAASSAPGGGDGAEYK SSGGGESRSSSRGGGG GGDGAEYKTLKISELG R S S Y K T 4 2 0 1 0 0 2 9 0 0 0 1 0 0 1 8 0 0 1 0 0 29 2 2585.1338 Q96T37-2;Q96T37-3;Q96T37 Q96T37-2 142 170 RBM15 Putative RNA-binding protein 15 yes no 4 0.025239 26.766 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2963900 0 0 1123300 685900 539450 615220 7311 1421 7414 32617;32618;32619;32620 21488 21488 1 SSSRGPYESGSGHSSGLGHQESR PHGYGSGRSSSRGPYE GLGHQESRSGQSSGYG R S S S R S 0 2 0 0 0 1 2 5 2 0 1 0 0 0 1 8 0 0 1 0 0 23 1 2345.0381 Q86YZ3;CON__Q86YZ3 Q86YZ3 568 590 HRNR Hornerin yes no 4 0.0081476 40.158 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 6703500 679630 1029500 0 2672900 689860 1631600 + 7312 308 7415 32621;32622;32623;32624;32625 21489 21489 1 SSSSGEGTCAVCGDNAACQHYGVR SLPSPPSRSSSSGEGT ACQHYGVRTCEGCKGF R S S V R T 3 1 1 1 3 1 1 4 1 0 0 0 0 0 0 4 1 0 1 2 0 24 0 2529.0067 Q92570;Q92570-3;E9PBS2;Q92570-2 Q92570 284 307 NR4A3 Nuclear receptor subfamily 4 group A member 3 yes no 3 9.954E-09 69.986 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 7590300 2099300 0 0 1021000 3036000 1433900 7313 1352 7416 32626;32627;32628;32629 21490;21491;21492;21493;21494 21493 5 SSSSGSVGESSSKGPRY GSSSGGHKSSSSGSVG SSSKGPRY________ K S S R Y - 0 1 0 0 0 0 1 3 0 0 0 1 0 0 1 8 0 0 1 1 0 17 2 1657.7544 P13645;CON__P13645 P13645 568 584 KRT10 Keratin, type I cytoskeletal 10 yes no 3 0.014442 47.548 By matching By matching By MS/MS By matching By matching By matching 1 1 1 985950 181800 0 582030 222120 0 0 + 7314 298 7417 32630;32631;32632 21495;21496 21496 2 SSSSSSQPEHSAMLVSTAASPSLIK SHDRCLEKSSSSSSQP AASPSLIKETTTGYYK K S S I K E 3 0 0 0 0 1 1 0 1 1 2 1 1 0 2 10 1 0 0 1 0 25 0 2488.2115 P42166 P42166 291 315 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 3 1.4721E-12 69.071 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 81978000 16475000 11103000 18829000 4844800 5577800 25148000 7315 913 7418 32633;32634;32635;32636;32637;32638 21497;21498;21499;21500;21501;21502 21498 6 SSSSSSQPEHSAMLVSTAASPSLIKETTTGYYK SHDRCLEKSSSSSSQP ETTTGYYKDIVENICG K S S Y K D 3 0 0 0 0 1 2 1 1 1 2 2 1 0 2 10 4 0 2 1 0 33 1 3431.6402 P42166 P42166 291 323 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 4 1.6791E-29 77.149 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 60559000 0 6930600 19495000 34133000 0 0 7316 913 7419 32639;32640;32641 21503;21504;21505 21503 3 SSSSTNTSLLTSK GTSLLTPKSSSSTNTS NTSLLTSKSTSQVAAS K S S S K S 0 0 1 0 0 0 0 0 0 0 2 1 0 0 0 6 3 0 0 0 0 13 0 1311.6518 Q9NXV6 Q9NXV6 349 361 CDKN2AIP CDKN2A-interacting protein yes yes 2 1.4664E-34 121.56 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 45801000 11066000 4527700 9576200 4764700 6916900 8949000 7317 1560 7420 32642;32643;32644;32645;32646;32647;32648 21506;21507;21508;21509;21510;21511;21512 21511 7 SSSTALTTNVTEQTEK VFTASKPKSSSTALTT NVTEQTEKDGDKDVFA K S S E K D 1 0 1 0 0 1 2 0 0 0 1 1 0 0 0 3 5 0 0 1 0 16 0 1695.8163 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 1342 1357 AHCTF1 Protein ELYS yes no 2 8.1999E-19 106.35 By MS/MS By MS/MS By matching By MS/MS By matching By matching 2 1 1 1 1 1 17249000 3025300 3772500 2201000 1297600 2129000 4823900 7318 1345 7421 32649;32650;32651;32652;32653;32654;32655 21513;21514;21515;21516 21515 4 SSSVRFVSTTTSCR FSSCSGGRSSSVRFVS VSTTTSCRTKY_____ R S S C R T 0 2 0 0 1 0 0 0 0 0 0 0 0 1 0 5 3 0 0 2 0 14 1 1573.7519 Q9NSB2;CON__Q9NSB2;CON__Q6ISB0 Q9NSB2 584 597 KRT84 Keratin, type II cuticular Hb4 yes no 3 0.0011274 76.311 By matching By matching By matching By MS/MS By matching By matching 1 1576300 0 0 0 1576300 0 0 + 7319 307 7422 32656 21517 21517 1 SSSVSPSSWKSPPASPESWK SVSSASWKSSSVSPSS PASPESWKSGPPELRK K S S W K S 1 0 0 0 0 0 1 0 0 0 0 2 0 0 4 9 0 2 0 1 0 20 1 2117.0065 Q96JM3 Q96JM3 372 391 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 3 0.0014678 52.365 By matching By matching By matching By MS/MS By matching By matching 1 1 4038100 0 2339300 0 1698700 0 0 7320 1399 7423 32657;32658 21518 21518 1 SSTAAYQPIK MHNLAASKSSTAAYQP TAAYQPIKEGRPIKSV K S S I K E 2 0 0 0 0 1 0 0 0 1 0 1 0 0 1 2 1 0 1 0 0 10 0 1064.5502 P54132;F5H7R6;H0YNU5 P54132 579 588 BLM Bloom syndrome protein yes no 2 0.013991 68.847 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 6038300 638810 1323800 1302200 0 767630 2005900 7321 965 7424 32659;32660;32661;32662;32663 21519;21520 21520 2 SSTAAYQPIKEGRPIK MHNLAASKSSTAAYQP IKEGRPIKSVSERLSS K S S I K S 2 1 0 0 0 1 1 1 0 2 0 2 0 0 2 2 1 0 1 0 0 16 2 1744.9472 P54132;F5H7R6;H0YNU5 P54132 579 594 BLM Bloom syndrome protein yes no 3;4 4.7859E-26 107.35 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1 1 22234000 2116600 2099000 7968300 2343700 3564200 4141900 7322 965 7425 32664;32665;32666;32667;32668;32669;32670 21521;21522;21523;21524;21525;21526;21527 21522 7 SSTATHPPGPAVQLNKTPSSSK PLFFRRAKSSTATHPP NKTPSSSKKVTFGLNR K S S S K K 2 0 1 0 0 1 0 1 1 0 1 2 0 0 4 5 3 0 0 1 0 22 1 2191.1233 Q14684-2;Q14684 Q14684-2 643 664 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 3;4 1.0496E-134 142.27 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 235190000 63237000 23349000 41525000 29651000 48756000 28671000 7323 1111 7426 32671;32672;32673;32674;32675;32676;32677;32678;32679;32680;32681;32682 21528;21529;21530;21531;21532;21533;21534;21535;21536;21537;21538;21539 21539 12 SSTATHPPGPAVQLNKTPSSSKK PLFFRRAKSSTATHPP KTPSSSKKVTFGLNRN K S S K K V 2 0 1 0 0 1 0 1 1 0 1 3 0 0 4 5 3 0 0 1 0 23 2 2319.2183 Q14684-2;Q14684 Q14684-2 643 665 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 4;5 6.2326E-06 62.325 By MS/MS By matching By MS/MS By MS/MS By matching By matching 3 3 4 3 2 2 109990000 24865000 12073000 17888000 23590000 15262000 16307000 7324 1111 7427 32683;32684;32685;32686;32687;32688;32689;32690;32691;32692;32693;32694;32695;32696;32697;32698;32699 21540;21541;21542;21543;21544 21541 4 SSTEIPLETCCSSELKGGGSGTSLER AEQDSDNKSSTEIPLE GSGTSLEREQFEGLGS K S S E R E 0 1 0 0 2 0 4 4 0 1 3 1 0 0 1 6 3 0 0 0 0 26 1 2741.2484 Q8NCN4 Q8NCN4 520 545 RNF169 E3 ubiquitin-protein ligase RNF169 yes yes 3 9.6537E-09 61.437 By matching By MS/MS By matching By matching By matching By matching 1 11717000 0 11717000 0 0 0 0 7325 1318 7428 32700 21545;21546 21546 2 SSTKQPTVGGTSSTPR PGQAGSQKSSTKQPTV GGTSSTPRAQKAIVNH K S S P R A 0 1 0 0 0 1 0 2 0 0 0 1 0 0 2 4 4 0 0 1 0 16 1 1589.8009 Q68CP9-3;Q68CP9;F8VWP4;Q68CP9-2;E7ENG3;F8W108;F8WCU9 Q68CP9-3 1713 1728 ARID2 AT-rich interactive domain-containing protein 2 yes no 3 1.7713E-18 105.53 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 10653000 1285500 1137400 1591000 828150 2199400 3611700 7326 1215 7429 32701;32702;32703;32704;32705;32706 21547;21548;21549;21550;21551;21552 21549 6 SSTKQPTVGGTSSTPRAQK PGQAGSQKSSTKQPTV SSTPRAQKAIVNHPSA K S S Q K A 1 1 0 0 0 2 0 2 0 0 0 2 0 0 2 4 4 0 0 1 0 19 2 1916.9916 Q68CP9-3;Q68CP9;F8VWP4;Q68CP9-2;E7ENG3;F8W108;F8WCU9 Q68CP9-3 1713 1731 ARID2 AT-rich interactive domain-containing protein 2 yes no 4 0.001117 57.936 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 14263000 2497500 1627600 3207500 1695100 1692200 3543100 7327 1215 7430 32707;32708;32709;32710;32711;32712 21553;21554;21555;21556 21553 4 SSTLGPSALK SSGATSSKSSTLGPSA TLGPSALKTIGSSASV K S S L K T 1 0 0 0 0 0 0 1 0 0 2 1 0 0 1 3 1 0 0 0 0 10 0 959.52876 B4DX32;O60870;F5GXB3 B4DX32 222 231 KIN DNA/RNA-binding protein KIN17 yes no 2 0.012231 70.412 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 29009000 0 3948500 5613700 2464800 5086000 11896000 7328 136 7431 32713;32714;32715;32716;32717 21557;21558 21558 2 SSTLTSSRLATGEEEGGGSSSK RSPHLWKKSSTLTSSR EGGGSSSKRFLRSCSA K S S S K R 1 1 0 0 0 0 3 4 0 0 2 1 0 0 0 7 3 0 0 0 0 22 1 2126.9927 H7C1H8;P00519;P00519-2 H7C1H8 505 526 ABL1 Tyrosine-protein kinase ABL1 yes no 3 0.0024716 49.433 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 3437500 801130 954130 0 0 743560 938710 7329 666 7432 32718;32719;32720;32721 21559;21560 21560 2 SSTPLPTISSSAENTR REQGTESRSSTPLPTI SSSAENTRQNGSNDSD R S S T R Q 1 1 1 0 0 0 1 0 0 1 1 0 0 0 2 5 3 0 0 0 0 16 0 1646.8111 P42166;P42167;P42167-2;G5E972;H0YJH7 P42166 158 173 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2 0.015691 42.149 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 2 1 20028000 1889900 3007800 2533500 1609600 4239500 6747400 7330 913;914 7433 32722;32723;32724;32725;32726;32727;32728 21561;21562;21563 21561 3 SSTQFNKGPSYGLSAEVK ________________ YGLSAEVKNRLLSKYD M S S V K N 1 0 1 0 0 1 1 2 0 0 1 2 0 1 1 4 1 0 1 1 0 18 1 1898.9374 E7ENR3;B4DDF4;Q99439;B4DUT8;Q99439-2 E7ENR3 2 19 CNN2 Calponin-2 yes no 2;3 0 238.19 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 1 95094000 9274900 23933000 10645000 8064400 2714400 40462000 7331 80 7434 32729;32730;32731;32732;32733;32734;32735;32736 21564;21565;21566;21567;21568;21569;21570 21566 7 SSTQFNKGPSYGLSAEVKNR ________________ LSAEVKNRLLSKYDPQ M S S N R L 1 1 2 0 0 1 1 2 0 0 1 2 0 1 1 4 1 0 1 1 0 20 2 2169.0814 E7ENR3;B4DDF4;Q99439;B4DUT8;Q99439-2 E7ENR3 2 21 CNN2 Calponin-2 yes no 3 1.2226E-26 101.49 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 21089000 2910600 1680100 9980700 900480 476660 5140100 7332 80 7435 32737;32738;32739;32740;32741;32742 21571;21572;21573;21574 21571 4 SSTTVSSFANSKPGSAK HHANGLAKSSTTVSSF NSKPGSAKKLVIKNFK K S S A K K 2 0 1 0 0 0 0 1 0 0 0 2 0 1 1 6 2 0 0 1 0 17 1 1654.8162 Q13620-1;Q13620 Q13620-1 161 177 CUL4B Cullin-4B yes no 3 0.0024016 53.395 By MS/MS By matching By matching By MS/MS By MS/MS By matching 2 1 1 1 1 1 11152000 2097000 1748700 2148600 1089800 1272300 2795800 7333 1090 7436 32743;32744;32745;32746;32747;32748;32749 21575;21576;21577 21575 3 SSTVAPAQPDGAESEWTDVETR PNGSRKRRSSTVAPAQ EWTDVETRCSVAVEMR R S S T R C 3 1 0 2 0 1 3 1 0 0 0 0 0 0 2 3 3 1 0 2 0 22 0 2332.0455 Q02241-2;H7BYN4;Q02241;B4E1K0 Q02241-2 807 828 KIF23 Kinesin-like protein KIF23 yes no 2 1.2123E-09 83.871 By matching By MS/MS By matching By matching By matching By matching 1 2981700 0 2981700 0 0 0 0 7334 660 7437 32750 21578 21578 1 SSTVESEIASEEK ASTTGSRKSSTVESEI SEIASEEKSRAAERKR K S S E K S 1 0 0 0 0 0 4 0 0 1 0 1 0 0 0 4 1 0 0 1 0 13 0 1394.6413 Q9Y2K1;Q9Y2K1-2 Q9Y2K1 304 316 ZBTB1 Zinc finger and BTB domain-containing protein 1 yes no 2 0.0013561 89.507 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 13492000 2676400 1843800 2289500 2088600 1340500 3252900 7335 1633 7438 32751;32752;32753;32754;32755;32756;32757 21579;21580;21581;21582;21583 21579 5 SSVETTPSVIQHVGQPPATPAK ADGTKTSRSSVETTPS QPPATPAKHSSSTSSK R S S A K H 2 0 0 0 0 2 1 1 1 1 0 1 0 0 4 3 3 0 0 3 0 22 0 2230.1594 Q6W2J9;Q6W2J9-4;Q6W2J9-2;H7BYY2;Q6W2J9-3 Q6W2J9 586 607 BCOR BCL-6 corepressor yes no 3 0.001977 49.559 By MS/MS By matching By matching By matching By matching By matching 1 5113700 5113700 0 0 0 0 0 7336 1237 7439 32758 21584 21584 1 SSVKTPEPVVPTAPEPHPTTSTDQPVTPK ATRCRTNRSSVKTPEP TDQPVTPKLTSRATRR R S S P K L 1 0 0 1 0 1 2 0 1 0 0 2 0 0 8 3 6 0 0 4 0 29 1 3023.5451 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7 Q14676 1604 1632 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3;4 8.8397E-30 84.214 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 80579000 40056000 3667100 19289000 3891600 6968900 6706200 7337 1109 7440 32759;32760;32761;32762;32763;32764;32765 21585;21586;21587;21588;21589;21590;21591;21592;21593 21586 9 SSVKTPETVVPTALELQPSTSTDRPVTSEPTSQATR VTRGRKSRSSVKTPET EPTSQATRGRKNRSSV R S S T R G 2 2 0 1 0 2 3 0 0 0 2 1 0 0 5 6 8 0 0 4 0 36 2 3796.9331 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;H0Y6Z8 Q14676 1194 1229 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 4 1.4815E-05 42.039 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 34127000 20122000 8893400 0 5111100 0 0 7338 1109 7441 32766;32767;32768 21594;21595 21595 1 SSVKTPETVVPTAPELQASASTDQPVTSEPTSR ATRGRTDRSSVKTPET VTSEPTSRTTRGRKNR R S S S R T 3 1 0 1 0 2 3 0 0 0 1 1 0 0 5 6 6 0 0 4 0 33 1 3396.6896 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7 Q14676 1481 1513 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3 7.2564E-13 58.929 By matching By MS/MS By matching By matching By matching By matching 1 14299000 0 14299000 0 0 0 0 7339 1109 7442 32769 21596 21596 1 SSVKTPETVVPTAPELQASASTDQPVTSEPTSRTTR ATRGRTDRSSVKTPET EPTSRTTRGRKNRSSV R S S T R G 3 2 0 1 0 2 3 0 0 0 1 1 0 0 5 6 8 0 0 4 0 36 2 3754.8861 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7 Q14676 1481 1516 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 4 0.0026242 25.199 By matching By matching By matching By MS/MS By matching By matching 1 5800600 0 0 0 5800600 0 0 7340 1109 7443 32770 21597 21597 1 SSVKTPETVVPTAPELQPSTSTDQPVTPEPTSQATR ATRGRTNRSSVKTPET EPTSQATRGRTDRSSV R S S T R G 2 1 0 1 0 3 3 0 0 0 1 1 0 0 7 5 8 0 0 4 0 36 1 3762.88 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7 Q14676 1440 1475 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3 0.011945 33.743 By MS/MS By matching By matching By matching By matching By matching 1 18437000 18437000 0 0 0 0 0 7341 1109 7444 32771 21598 21598 0 SSVKTPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQSK ATRRKTNRSSVKTPKP IAQGGQSKTLRSSTVR R S S S K T 4 0 0 2 0 3 3 2 0 1 1 3 0 1 6 5 4 0 0 3 0 38 2 3893.9535 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7 Q14676 1645 1682 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 4 7.3238E-56 82.294 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 82010000 0 32496000 0 18394000 0 31120000 7342 1109 7445 32772;32773;32774 21599;21600 21599 1 SSVLIAQQTDTSDPEK KLLRLGPKSSVLIAQQ TDTSDPEKVVSAFLKV K S S E K V 1 0 0 2 0 2 1 0 0 1 1 1 0 0 1 3 2 0 0 1 0 16 0 1717.837 P46060;F8W7I9 P46060 453 468 RANGAP1 Ran GTPase-activating protein 1 yes no 2 5.2164E-18 102.39 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 18854000 3192500 7216600 3325800 2749300 2370100 0 7343 921 7446 32775;32776;32777;32778;32779 21601;21602;21603;21604;21605;21606 21605 6 SSVLTMNR TPHRIRRKSSVLTMNR SSVLTMNRIRQQLRFL K S S N R I 0 1 1 0 0 0 0 0 0 0 1 0 1 0 0 2 1 0 0 1 0 8 0 906.4593 Q13415 Q13415 383 390 ORC1 Origin recognition complex subunit 1 yes yes 2 0.019325 80.438 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5263700 0 750360 0 565220 0 3948100 7344 1080 7447 32780;32781;32782 21607 21607 1 SSVPASDDAYPEIEK TEKTVKTKSSVPASDD DAYPEIEKFFPFNLLD K S S E K F 2 0 0 2 0 0 2 0 0 1 0 1 0 0 2 3 0 0 1 1 0 15 0 1606.7362 Q9NZH5-2;Q9NZH5;O95997 Q9NZH5-2 102 116 PTTG2;PTTG1 Securin-2;Securin yes no 2 1.8319E-05 90.229 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 4880500 0 1351000 1631100 0 0 1898400 7345 777 7448 32783;32784;32785 21608;21609;21610 21610 2 SSVSRVPCNVEGISPELEK LSNISVPKSSVSRVPC GISPELEKVFIKENNG K S S E K V 0 1 1 0 1 0 3 1 0 1 1 1 0 0 2 4 0 0 0 3 0 19 1 2086.0365 H7C0B2;H7C2L5;Q86VQ1 H7C0B2 34 52 GLCCI1 Glucocorticoid-induced transcript 1 protein yes no 3 0.00091263 61.757 By matching By MS/MS By matching By matching By matching By matching 1 1651300 0 1651300 0 0 0 0 7346 662 7449 32786 21611 21611 1 SSVVPSVILKPENIKK TPISGGQRSSVVPSVI LKPENIKKRDAKEAKA R S S K K R 0 0 1 0 0 0 1 0 0 2 1 3 0 0 2 3 0 0 0 3 0 16 2 1737.04 Q13415 Q13415 345 360 ORC1 Origin recognition complex subunit 1 yes yes 3;4 6.008E-118 144.8 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 3 2 1 193600000 26259000 105810000 8996100 15655000 7349400 29534000 7347 1080 7450 32787;32788;32789;32790;32791;32792;32793;32794;32795;32796 21612;21613;21614;21615;21616;21617;21618;21619;21620;21621 21617 10 SSYIAASTAKPPK HMNKGETKSSYIAAST ASTAKPPKEILKEADT K S S P K E 3 0 0 0 0 0 0 0 0 1 0 2 0 0 2 3 1 0 1 0 0 13 1 1319.7085 Q7Z2T5;Q7Z2T5-2 Q7Z2T5 214 226 TRMT1L TRMT1-like protein yes no 3 0.038987 41.825 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3310300 0 1132500 0 0 1074300 1103500 7348 1248 7451 32797;32798;32799 21622 21622 1 SSYIAASTAKPPKEILK HMNKGETKSSYIAAST KPPKEILKEADTDVQV K S S L K E 3 0 0 0 0 0 1 0 0 2 1 3 0 0 2 3 1 0 1 0 0 17 2 1803.0142 Q7Z2T5;Q7Z2T5-2 Q7Z2T5 214 230 TRMT1L TRMT1-like protein yes no 3;4 0.00242 70.47 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 1 1 2 15356000 1702900 4746000 2136600 0 376660 6393600 7349 1248 7452 32800;32801;32802;32803;32804;32805;32806 21623;21624 21624 1 SSYLEYQK IQKLKEERSSYLEYQK SSYLEYQKVMREIEHL R S S Q K V 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 2 0 0 2 0 0 8 0 1016.4815 O95347-2;O95347;Q5T821;F5GZR0 O95347-2 215 222 SMC2 Structural maintenance of chromosomes protein 2 yes no 2 0.029084 71.692 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2672200 308440 156090 324460 0 0 1883200 7350 770 7453 32807;32808;32809;32810 21625 21625 1 SSYNCPLCEK NQETKEEKSSYNCPLC YNCPLCEKICTTQHQL K S S E K I 0 0 1 0 2 0 1 0 0 0 1 1 0 0 1 2 0 0 1 0 0 10 0 1256.5166 Q92766-3;Q92766;Q92766-2;C9JU34;C9JE09;C9JPJ6 Q92766-3 64 73 RREB1 Ras-responsive element-binding protein 1 yes no 2 0.019916 63.694 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 7878900 0 1156100 1351800 1277200 1237600 2856100 7351 1357 7454 32811;32812;32813;32814;32815 21626;21627 21627 2 SSYSRFSSSGGGGGGGRFSSSSGYGGGSSR LGSGGSIRSSYSRFSS GYGGGSSRVCGRGGGG R S S S R V 0 3 0 0 0 0 0 11 0 0 0 0 0 2 0 12 0 0 2 0 0 30 2 2778.1978 P35527 P35527 30 59 KRT9 Keratin, type I cytoskeletal 9 yes yes 4 0.011141 28.923 By matching By matching By matching By MS/MS By matching By matching 1 1884800 0 0 0 1884800 0 0 + 7352 899 7455 32816 21628 21628 1 STAAVPELK ________________ TAAVPELKQISRVEAM M S T L K Q 2 0 0 0 0 0 1 0 0 0 1 1 0 0 1 1 1 0 0 1 0 9 0 914.5073 Q9BRJ7;H3BTC7;Q9BRJ7-2 Q9BRJ7 2 10 NUDT16L1 Protein syndesmos yes no 1;2 0.017174 58.246 By matching By matching By MS/MS By matching By matching By MS/MS 2 2 19610000 0 0 5350000 0 0 14260000 7353 1440 7456 32817;32818;32819;32820 21629;21630;21631 21630 3 STAAVPELKQISR ________________ PELKQISRVEAMRLGP M S T S R V 2 1 0 0 0 1 1 0 0 1 1 1 0 0 1 2 1 0 0 1 0 13 1 1398.7831 Q9BRJ7;H3BTC7;Q9BRJ7-2 Q9BRJ7 2 14 NUDT16L1 Protein syndesmos yes no 2 5.6215E-155 162.67 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 294750000 39711000 104260000 0 15846000 0 134940000 7354 1440 7457 32821;32822;32823;32824 21632;21633;21634;21635 21633 4 STAAVPELKQISRVEAMR ________________ ISRVEAMRLGPGWSHS M S T M R L 3 2 0 0 0 1 2 0 0 1 1 1 1 0 1 2 1 0 0 2 0 18 2 1985.0728 Q9BRJ7;H3BTC7;Q9BRJ7-2 Q9BRJ7 2 19 NUDT16L1 Protein syndesmos yes no 3 0.00051534 56.514 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 31662000 0 15452000 0 16210000 0 0 7355 1440 7458;7459 32825;32826 21636;21637 21637 166 2 STACQMLVCYAK KTAGLEEKSTACQMLV QMLVCYAKELKEGFVE K S T A K E 2 0 0 0 2 1 0 0 0 0 1 1 1 0 0 1 1 0 1 1 0 12 0 1430.6356 B4E0R6;O00410-2;O00410;H0Y8C6;O00410-3 B4E0R6 554 565 IPO5 Importin-5 yes no 2 2.2347E-07 104.07 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 29968000 11288000 11994000 0 6687200 0 0 7356 155 7460 32827;32828;32829 21638;21639 21638 2 STADALDDENTFK ________________ LDDENTFKILVATDIH M S T F K I 2 0 1 3 0 0 1 0 0 0 1 1 0 1 0 1 2 0 0 0 0 13 0 1425.626 P49959-2;F8W7U8;P49959;F5H742;F5H256;F5GXT0 P49959-2 2 14 MRE11A Double-strand break repair protein MRE11A yes no 2 0.0011637 70.54 By matching By MS/MS By matching By matching By matching By matching 1 2025500 0 2025500 0 0 0 0 7357 558 7461 32830 21640;21641 21641 2 STADSGGEGLETAPK EDMADKEKSTADSGGE EGLETAPKSEEFSDLP K S T P K S 2 0 0 1 0 0 2 3 0 0 1 1 0 0 1 2 2 0 0 0 0 15 0 1418.6525 Q8NFC6 Q8NFC6 262 276 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 6.0336E-05 88.768 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 10139000 0 0 2060100 1111100 2024400 4943100 7358 1325 7462 32831;32832;32833;32834 21642;21643;21644;21645 21645 4 STAELEAEELEK RARAVTCKSTAELEAE LEAEELEKLQQYKFKA K S T E K L 2 0 0 0 0 0 5 0 0 0 2 1 0 0 0 1 1 0 0 0 0 12 0 1347.6406 Q9ULW0;Q96RR5 Q9ULW0 385 396 TPX2;HCA90 Targeting protein for Xklp2 yes no 2 2.0413E-79 145.31 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 199460000 16576000 52802000 29479000 15303000 13077000 72219000 7359 1611 7463 32835;32836;32837;32838;32839;32840;32841 21646;21647;21648;21649;21650;21651;21652 21648 7 STAGDTHLGGEDFDNR EDGIFEVKSTAGDTHL GGEDFDNRMVNHFIAE K S T N R M 1 1 1 3 0 0 1 3 1 0 1 0 0 1 0 1 2 0 0 0 0 16 0 1690.7183 P11142;E9PKE3;P11142-2;E9PN89;P54652 P11142 221 236 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 3 0.032267 36.993 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 7477600 858830 1882500 765650 608080 1344600 2018000 7360 824 7464 32842;32843;32844;32845;32846;32847 21653 21653 1 STAGIMNAEAATK IYEESGNKSTAGIMNA MNAEAATKILTELRRL K S T T K I 4 0 1 0 0 0 1 1 0 1 0 1 1 0 0 1 2 0 0 0 0 13 0 1263.6129 Q8IWC1-2;Q8IWC1;H7BY77;Q8IWC1-3 Q8IWC1-2 548 560 MAP7D3 MAP7 domain-containing protein 3 yes no 2 3.3904E-11 109.95 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 5207900 373950 816150 494790 399030 1247900 1876100 7361 1280 7465 32848;32849;32850;32851;32852;32853 21654;21655;21656 21654 2 STAGSAAAMAGAK AGKGRSRKSTAGSAAA AAAMAGAKAGAAAASA K S T A K A 6 0 0 0 0 0 0 2 0 0 0 1 1 0 0 2 1 0 0 0 0 13 0 1092.5234 Q9ULG1 Q9ULG1 1452 1464 INO80 DNA helicase INO80 yes yes 2 0.0022322 67.997 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 3636600 599460 458060 624000 351920 893460 709700 7362 1606 7466 32854;32855;32856;32857;32858;32859 21657;21658;21659 21658 3 STAPAVAYDSK QDSYSYVRSTAPAVAY PAVAYDSKQYYQQPTA R S T S K Q 3 0 0 1 0 0 0 0 0 0 0 1 0 0 1 2 1 0 1 1 0 11 0 1108.5401 Q96KR1;B5MEH6;Q05D65 Q96KR1 148 158 ZFR Zinc finger RNA-binding protein yes no 2 0.012879 61.48 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 80750000 7905800 12108000 10422000 4161100 20238000 25915000 7363 1403 7467 32860;32861;32862;32863;32864;32865 21660;21661;21662;21663;21664 21664 5 STAPETAIECTQAPAPASEDEK IEGEKEVKSTAPETAI APASEDEKVVVEPPEG K S T E K V 5 0 0 1 1 1 4 0 0 1 0 1 0 0 3 2 3 0 0 0 0 22 0 2302.0271 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1559 1580 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2;3 0.0030769 46.808 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 2 1 176130000 0 80841000 26337000 2021000 2297500 64629000 7364 486 7468 32866;32867;32868;32869;32870;32871;32872 21665;21666;21667 21666 3 STAPETAIECTQAPAPASEDEKVVVEPPEGEEK IEGEKEVKSTAPETAI EPPEGEEKVEKAEVKE K S T E K V 5 0 0 1 1 1 8 1 0 1 0 2 0 0 5 2 3 0 0 3 0 33 1 3494.6247 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1559 1591 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 3.1607E-62 96.793 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 115460000 0 11246000 78242000 0 0 25971000 7365 486 7469 32873;32874;32875 21668;21669;21670;21671 21671 4 STCDSENLAVINK DLNERPAKSTCDSENL ENLAVINKSSRRVDQE K S T N K S 1 0 2 1 1 0 1 0 0 1 1 1 0 0 0 2 1 0 0 1 0 13 0 1449.677 Q12986;Q12986-2;F5GXD0;Q12986-3 Q12986 293 305 NFX1 Transcriptional repressor NF-X1 yes no 2 0.00012815 94.781 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 13840000 0 0 2496500 1892700 3967300 5483300 7366 1066 7470 32876;32877;32878;32879 21672;21673;21674;21675 21674 4 STCIYGGAPK YGKCSRLKSTCIYGGA CIYGGAPKGPQIRDLE K S T P K G 1 0 0 0 1 0 0 2 0 1 0 1 0 0 1 1 1 0 1 0 0 10 0 1052.4961 P17844;E7ETL9;Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 196 205 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 2 0.0093219 76.228 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 24881000 2897800 3641600 2912500 1735700 5168800 8524300 7367 1361;629;853 7471 32880;32881;32882;32883;32884;32885;32886 21676;21677;21678;21679;21680;21681 21676 6 STCIYGGAPKGPQIR YGKCSRLKSTCIYGGA APKGPQIRDLERGVEI K S T I R D 1 1 0 0 1 1 0 3 0 2 0 1 0 0 2 1 1 0 1 0 0 15 1 1603.8141 P17844;E7ETL9;Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 196 210 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 3 4.0825E-14 96.059 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 211500000 20961000 32379000 16399000 24103000 0 117660000 7368 1361;629;853 7472 32887;32888;32889;32890;32891;32892 21682;21683;21684;21685;21686;21687;21688 21686 7 STCIYGGAPKGPQIRDLER YGKCSRLKSTCIYGGA PQIRDLERGVEICIAT K S T E R G 1 2 0 1 1 1 1 3 0 2 1 1 0 0 2 1 1 0 1 0 0 19 2 2117.0688 P17844;E7ETL9;Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 196 214 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 3;4 0.0036936 59.15 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 74522000 34590000 5791900 16665000 2699200 1755400 13021000 7369 1361;629;853 7473 32893;32894;32895;32896;32897;32898 21689;21690;21691 21689 3 STDDRGEPVTHYLVK DRIMDFARSTDDRGEP PVTHYLVKWCSLPYED R S T V K W 0 1 0 2 0 0 1 1 1 0 1 1 0 0 1 1 2 0 1 2 0 15 1 1715.8479 Q9P2D1;Q9P2D1-2 Q9P2D1 893 907 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes no 3 0.0026612 62.68 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 5673800 0 0 0 0 1781400 3892400 7370 1578 7474 32899;32900 21692;21693 21692 2 STDNQRQQQLNDVVK PVSCVVNRSTDNQRQQ QQLNDVVKNSSTIIQN R S T V K N 0 1 2 2 0 4 0 0 0 0 1 1 0 0 0 1 1 0 0 2 0 15 1 1771.8813 P38432 P38432 430 444 COIL Coilin yes yes 3 1.7365E-86 137.09 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 28712000 2106500 4408500 2907000 1747800 5407900 12134000 7371 904 7475 32901;32902;32903;32904;32905;32906 21694;21695;21696 21694 3 STEEQELEK PAKQKFLKSTEEQELE TEEQELEKSMKMQQEV K S T E K S 0 0 0 0 0 1 4 0 0 0 1 1 0 0 0 1 1 0 0 0 0 9 0 1091.4982 Q9ULW0;Q96RR5 Q9ULW0 209 217 TPX2;HCA90 Targeting protein for Xklp2 yes no 2 0.0082056 98.044 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 6348600 0 2123800 4224900 0 0 0 7372 1611 7476 32907;32908 21697;21698 21697 2 STEFRNIQKLPVESK STANRSGRSTEFRNIQ QKLPVESKSEETNTEI R S T S K S 0 1 1 0 0 1 2 0 0 1 1 2 0 1 1 2 1 0 0 1 0 15 2 1774.9577 P46013;F5H4V4;P46013-2 P46013 878 892 MKI67 Antigen KI-67 no no 3;4 6.608E-42 120.21 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 319410000 30540000 52291000 53030000 11533000 68656000 103360000 7373 919;920 7477 32909;32910;32911;32912;32913;32914;32915;32916;32917;32918;32919 21699;21700;21701;21702;21703;21704;21705;21706 21700 7 STELLIR REIRRYQKSTELLIRK KSTELLIRKLPFQRLV K S T I R K 0 1 0 0 0 0 1 0 0 1 2 0 0 0 0 1 1 0 0 0 0 7 0 830.48617 B4DEB1;Q6NXT2;Q71DI3;Q5TEC6;Q16695;P84243;P68431 B4DEB1 58 64 H3F3A;H3F3C;HIST2H3A;HIST2H3PS2;HIST3H3;HIST1H3A Histone H3;Histone H3.3C;Histone H3.2;Histone H3.1t;Histone H3.3;Histone H3.1 yes no 2 2.4959E-31 138.85 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 13618000 0 2530500 0 0 4534800 6552800 7374 82 7478 32920;32921;32922 21707;21708;21709 21709 3 STESDVKADGDSKGSEEVDSHCK PEPQDDGKSTESDVKA EEVDSHCKKALSHKEL K S T C K K 1 0 0 4 1 0 3 2 1 0 0 3 0 0 0 5 1 0 0 2 0 23 2 2466.0453 Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2;Q9Y4W2-4 Q9Y4W2-3 193 215 LAS1L Ribosomal biogenesis protein LAS1L yes no 4 1.6093E-08 68.189 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 7652100 1657100 1074300 1925500 1063500 1931700 0 7375 1651 7479 32923;32924;32925;32926;32927 21710;21711;21712;21713;21714;21715;21716 21712 7 STESLQANVQR VDPRRRNKSTESLQAN SLQANVQRLKEYRSKL K S T Q R L 1 1 1 0 0 2 1 0 0 0 1 0 0 0 0 2 1 0 0 1 0 11 0 1231.6157 P26373 P26373 106 116 RPL13 60S ribosomal protein L13 yes yes 2 8.4274E-107 160.53 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 15256000 1551000 1266400 785860 1152900 4515600 5984200 7376 880 7480 32928;32929;32930;32931;32932;32933 21717;21718;21719;21720;21721;21722;21723 21719 7 STESLQANVQRLK VDPRRRNKSTESLQAN QANVQRLKEYRSKLIL K S T L K E 1 1 1 0 0 2 1 0 0 0 2 1 0 0 0 2 1 0 0 1 0 13 1 1472.7947 P26373 P26373 106 118 RPL13 60S ribosomal protein L13 yes yes 3 2.8108E-05 96.756 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 9204400 1550200 1288300 882370 1470000 1664700 2348800 7377 880 7481 32934;32935;32936;32937;32938;32939 21724;21725;21726;21727;21728 21728 5 STEVEILEK LEEKIKVKSTEVEILE TEVEILEKSQIEAIAS K S T E K S 0 0 0 0 0 0 3 0 0 1 1 1 0 0 0 1 1 0 0 1 0 9 0 1046.5496 Q2TAK8 Q2TAK8 53 61 MUM1 PWWP domain-containing protein MUM1 yes yes 2 4.0521E-08 114.51 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 20009000 0 0 4544800 0 0 15464000 7378 1161 7482 32940;32941;32942 21729;21730 21730 2 STFREESPLRIK KNLDAREKSTFREESP EESPLRIKMIASDSHR K S T I K M 0 2 0 0 0 0 2 0 0 1 1 1 0 1 1 2 1 0 0 0 0 12 2 1461.794 Q9NYF8-2;Q9NYF8;Q9NYF8-4;E9PK09;E9PQN2;E9PKI6;E9PJA7;Q9NYF8-3;E9PK91 Q9NYF8-2 523 534 BCLAF1 Bcl-2-associated transcription factor 1 no no 3 0.0056104 79.036 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 13819000 3708400 1070000 2653100 2106400 2234800 2046600 7379 1563;452 7483 32943;32944;32945;32946;32947;32948 21731;21732;21733 21733 3 STFSFSMTKPSEK TKDENSSKSTFSFSMT SMTKPSEKESEQPAKA K S T E K E 0 0 0 0 0 0 1 0 0 0 0 2 1 2 1 4 2 0 0 0 0 13 1 1475.6966 P49790;F6QR24;Q4LE47 P49790 1149 1161 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 3 0.001973 72.891 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 20736000 3484100 2887100 3558000 1929400 1374800 7502400 7380 531 7484 32949;32950;32951;32952;32953;32954 21734;21735;21736;21737;21738;21739;21740 21737 7 STGEAFVQFASQEIAEK LPVDFQGRSTGEAFVQ ASQEIAEKALKKHKER R S T E K A 3 0 0 0 0 2 3 1 0 1 0 1 0 2 0 2 1 0 0 1 0 17 0 1840.8843 D6RBM0;E9PCY7;P31943;G8JLB6;D6RIU0;E5RGV0;E7EN40;E5RGH4;H0YB39;P55795;B4DFK9 D6RBM0 151 167 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein H2, N-terminally processed no no 2 1.784E-278 170 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 0 0 0 0 0 0 0 7381 322;970 7485 32955;32956 21741;21742 21742 2 STGEPLGHVPAR HPSWLPPKSTGEPLGH PLGHVPARMETTHSFG K S T A R M 1 1 0 0 0 0 1 2 1 0 1 0 0 0 2 1 1 0 0 1 0 12 0 1219.6309 Q93052;C9JUT4;C9JE51;C9J2R5;C9JIY7;C9JT42;C9J3U9;C9J1K7;C9J5C8;C9J4E3 Q93052 11 22 LPP Lipoma-preferred partner yes no 3 0.0081004 59.198 By matching By matching By matching By matching By matching By MS/MS 1 1 2173900 0 748250 0 0 0 1425700 7382 1367 7486 32957;32958 21743 21743 1 STGSATSLASQGER SESGMTVRSTGSATSL SLASQGERRRRTLPQL R S T E R R 2 1 0 0 0 1 1 2 0 0 1 0 0 0 0 4 2 0 0 0 0 14 0 1350.6375 Q5SW79-2;Q5SW79-3;H0Y2V6;Q5SW79 Q5SW79-2 529 542 CEP170 Centrosomal protein of 170 kDa yes no 2 0.0068957 53.491 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 3004600 0 172400 600560 519890 634500 1077300 7383 604 7487 32959;32960;32961;32962;32963 21744;21745;21746 21744 3 STGTETGSNINVNSELNPSTGNRSR TGRKPYVRSTGTETGS PSTGNRSREQSSEAAE R S T S R E 0 2 5 0 0 0 2 3 0 1 1 0 0 0 1 5 4 0 0 1 0 25 1 2591.2172 Q29RF7 Q29RF7 1159 1183 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 3 0.0029706 41.115 By matching By MS/MS By matching By matching By matching By matching 1 1 3584100 0 1450700 2133400 0 0 0 7384 1159 7488 32964;32965 21747 21747 1 STIGAYFLKPK CSTWNYQKSTIGAYFL GAYFLKPKELKKDDIT K S T P K E 1 0 0 0 0 0 0 1 0 1 1 2 0 1 1 1 1 0 1 0 0 11 1 1223.6914 Q8NI36;D6R922 Q8NI36 478 488 WDR36 WD repeat-containing protein 36 yes no 2 8.0239E-05 102.95 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 32052000 0 8768800 0 0 5879800 17403000 7385 1331 7489 32966;32967;32968 21748;21749;21750;21751 21749 4 STLADYSAQK SVLPLVQKSTLADYSA LADYSAQKDLEPESDR K S T Q K D 2 0 0 1 0 1 0 0 0 0 1 1 0 0 0 2 1 0 1 0 0 10 0 1082.5244 E7EQT4;Q9UKV3;Q9UKV3-5 E7EQT4 467 476 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.012231 70.412 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 3 2 1 1 1 11199000 3132800 3055100 1892600 0 2854500 263840 7386 364 7490 32969;32970;32971;32972;32973;32974;32975;32976 21752;21753;21754;21755;21756 21756 5 STLIPILHQK ETDLPQIRSTLIPILH LIPILHQKAKRGTPHQ R S T Q K A 0 0 0 0 0 1 0 0 1 2 2 1 0 0 1 1 1 0 0 0 0 10 0 1148.6917 Q29RF7 Q29RF7 718 727 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 0.0052997 86.882 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 14430000 6123600 0 0 1156800 0 7149200 7387 1159 7491 32977;32978;32979 21757;21758;21759 21759 3 STLIPILHQKAK ETDLPQIRSTLIPILH PILHQKAKRGTPHQAK R S T A K R 1 0 0 0 0 1 0 0 1 2 2 2 0 0 1 1 1 0 0 0 0 12 1 1347.8238 Q29RF7 Q29RF7 718 729 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 3 0.036823 45.653 By MS/MS By matching By matching By matching By matching By matching 1 682820 682820 0 0 0 0 0 7388 1159 7492 32980 21760 21760 1 STLLLNLDFGEPPPK ________________ DFGEPPPKKALEGNAK M S T P K K 0 0 1 1 0 0 1 1 0 0 4 1 0 1 3 1 1 0 0 0 0 15 0 1639.8821 Q9H9L3 Q9H9L3 2 16 ISG20L2 Interferon-stimulated 20 kDa exonuclease-like 2 yes yes 2 1.0831E-261 180.95 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 184540000 104660000 30314000 49572000 0 0 0 7389 1509 7493 32981;32982;32983;32984;32985 21761;21762;21763;21764;21765 21765 5 STLSNQLLGRK LGAPNAGKSTLSNQLL SNQLLGRKVFPVSRKV K S T R K V 0 1 1 0 0 1 0 1 0 0 3 1 0 0 0 2 1 0 0 0 0 11 1 1215.6935 O75616;O75616-2 O75616 127 137 ERAL1 GTPase Era, mitochondrial yes no 3 0.0056992 63.694 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 2 1 11909000 0 1208400 1927300 1137500 5092500 2543700 7390 748 7494 32986;32987;32988;32989;32990;32991 21766;21767;21768 21767 3 STLSQTVPSK GVSKPIVKSTLSQTVP LSQTVPSKGELSREIC K S T S K G 0 0 0 0 0 1 0 0 0 0 1 1 0 0 1 3 2 0 0 1 0 10 0 1046.5608 Q9NQW6;Q9NQW6-2 Q9NQW6 336 345 ANLN Actin-binding protein anillin yes no 2 0.0042247 88.134 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 8495200 740380 1248700 1253400 432020 1466700 3354000 7391 1533 7495 32992;32993;32994;32995;32996;32997 21769;21770;21771;21772 21770 4 STLSQTVPSKGELSR GVSKPIVKSTLSQTVP PSKGELSREICLQSQS K S T S R E 0 1 0 0 0 1 1 1 0 0 2 1 0 0 1 4 2 0 0 1 0 15 1 1588.842 Q9NQW6;Q9NQW6-2 Q9NQW6 336 350 ANLN Actin-binding protein anillin yes no 3 0.0086684 48.351 By matching By matching By matching By matching By matching By MS/MS 1 1 1 23476000 0 9133600 0 0 146800 14195000 7392 1533 7496 32998;32999;33000 21773 21773 1 STLTDSLVCK IAHVDHGKSTLTDSLV LTDSLVCKAGIIASAR K S T C K A 0 0 0 1 1 0 0 0 0 0 2 1 0 0 0 2 2 0 0 1 0 10 0 1122.5591 P13639;F5H370;B4DPU3;B4DMC6 P13639 33 42 EEF2 Elongation factor 2 yes no 2 0.0032681 89.679 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 12365000 0 0 2899000 2279000 877920 6309200 7393 833 7497 33001;33002;33003;33004 21774;21775 21775 2 STMLYNKFK VSQVIMEKSTMLYNKF TMLYNKFKNMFLVGEG K S T F K N 0 0 1 0 0 0 0 0 0 0 1 2 1 1 0 1 1 0 1 0 0 9 1 1130.5794 O75475 O75475 416 424 PSIP1 PC4 and SFRS1-interacting protein yes yes 2 0.015346 95.815 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 23902000 1806500 0 4832900 1770300 6634600 8858000 7394 741 7498 33005;33006;33007;33008;33009 21776;21777;21778 21778 3 STMQELNSR GILTANEKSTMQELNS TMQELNSRLASYLDKV K S T S R L 0 1 1 0 0 1 1 0 0 0 1 0 1 0 0 2 1 0 0 0 0 9 0 1064.4921 P35527;CON__P35527 P35527 155 163 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.014268 78.264 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 43716000 1894300 8124600 21058000 2624700 5462900 4552200 + 7395 899 7499 33010;33011;33012;33013;33014;33015 21779;21780;21781;21782;21783 21779 5 STMQELNSRLASYLDK GILTANEKSTMQELNS RLASYLDKVQALEEAN K S T D K V 1 1 1 1 0 1 1 0 0 0 3 1 1 0 0 3 1 0 1 0 0 16 1 1854.9146 P35527;CON__P35527 P35527 155 170 KRT9 Keratin, type I cytoskeletal 9 yes no 3 0.013952 81.128 By matching By MS/MS By matching By matching By matching By matching 1 9337300 0 9337300 0 0 0 0 + 7396 899 7500 33016 21784 21784 98 1 STNKGTAYTFFTPGNLK HRIGRTARSTNKGTAY FFTPGNLKQARELIKV R S T L K Q 1 0 2 0 0 0 0 2 0 0 1 2 0 2 1 1 4 0 1 0 0 17 1 1845.9261 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 433 449 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 2;3 2.0864E-209 161.94 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 3 1 2 1 247160000 71040000 50163000 53162000 50115000 22681000 0 7397 1361;629 7501 33017;33018;33019;33020;33021;33022;33023;33024 21785;21786;21787;21788;21789;21790;21791 21786 7 STNKGTAYTFFTPGNLKQAR HRIGRTARSTNKGTAY PGNLKQARELIKVLEE R S T A R E 2 1 2 0 0 1 0 2 0 0 1 2 0 2 1 1 4 0 1 0 0 20 2 2201.1229 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 433 452 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 3;4 4.8997E-100 131.37 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 1 2 1 236380000 57151000 57949000 48730000 66030000 6520900 0 7398 1361;629 7502 33025;33026;33027;33028;33029;33030;33031 21792;21793;21794;21795;21796;21797;21798;21799 21799 7 STNRIVEDDASISSCNK DTLLGKEKSTNRIVED ASISSCNKLITSDKVE K S T N K L 1 1 2 2 1 0 1 0 0 2 0 1 0 0 0 4 1 0 0 1 0 17 1 1894.8691 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 146 162 WAPAL Wings apart-like protein homolog yes no 3 8.9726E-08 92.236 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 19604000 918360 2081600 3029100 3744100 5219400 4611500 7399 1253 7503 33032;33033;33034;33035;33036;33037 21800;21801;21802;21803;21804;21805;21806;21807;21808 21803 8 STNVVYQAHHVSR QKTENQQKSTNVVYQA YQAHHVSRNKRGQVVG K S T S R N 1 1 1 0 0 1 0 0 2 0 0 0 0 0 0 2 1 0 1 3 0 13 0 1496.7484 O95340;H0Y373;E7ER89;O95340-2 O95340 15 27 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 3 0.0018599 80.905 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 4967800 430970 0 1400900 466140 792230 1877500 7400 368 7504 33038;33039;33040;33041;33042;33043 21809;21810 21809 2 STPAAGQPPHLTSAQDQDTISELASCLQR SPGQKIKKSTPAAGQP ELASCLQRARELGARV K S T Q R A 4 1 0 2 1 4 1 1 1 1 3 0 0 0 3 4 3 0 0 0 0 29 0 3078.4676 Q9H211 Q9H211 101 129 CDT1 DNA replication factor Cdt1 yes yes 4 0.017149 28.039 By matching By matching By matching By MS/MS By matching By matching 1 12059000 0 0 0 12059000 0 0 7401 1485 7505 33044 21811 21811 1 STPGSGSGPAHGPDPAHGPASCS ASVITIVKSTPGSGSG AHGPASCS________ K S T C S - 3 0 0 1 1 0 0 5 2 0 0 0 0 0 5 5 1 0 0 0 0 23 0 2086.8763 Q9ULX9-2;Q9ULX9 Q9ULX9-2 113 135 MAFF Transcription factor MafF yes no 3 1.3508E-09 77.08 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 15775000 4182500 644680 0 3852900 6069400 1025900 7402 1612 7506 33045;33046;33047;33048;33049 21812;21813;21814 21814 3 STPHRTPIITPNTK HSKESPARSTPHRTPI PIITPNTKAIQERLFK R S T T K A 0 1 1 0 0 0 0 0 1 2 0 1 0 0 3 1 4 0 0 0 0 14 1 1561.8576 Q9NQW6;Q9NQW6-2;H7C3S1 Q9NQW6 392 405 ANLN Actin-binding protein anillin yes no 3 0.0045951 57.53 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 41557000 4115800 10177000 11765000 6318800 9180600 0 7403 1533 7507 33050;33051;33052;33053;33054 21815;21816;21817 21816 3 STPKEETVNDPEEAGHR TSIPKRKKSTPKEETV DPEEAGHRSGSKKKRK K S T H R S 1 1 1 1 0 0 4 1 1 0 0 1 0 0 2 1 2 0 0 1 0 17 1 1894.8657 O00567 O00567 537 553 NOP56 Nucleolar protein 56 yes yes 3 0.0036749 50.178 By matching By matching By matching By matching By MS/MS By matching 1 1 802800 276110 0 0 0 526690 0 7404 692 7508 33055;33056 21818;21819 21819 2 STPKEETVNDPEEAGHRSGSK TSIPKRKKSTPKEETV AGHRSGSKKKRKFSKE K S T S K K 1 1 1 1 0 0 4 2 1 0 0 2 0 0 2 3 2 0 0 1 0 21 2 2254.0462 O00567 O00567 537 557 NOP56 Nucleolar protein 56 yes yes 3;4;5 0.021287 39.905 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 2 3 3 3 3 52646000 2334300 3581600 10530000 13904000 15360000 6936700 7405 692 7509 33057;33058;33059;33060;33061;33062;33063;33064;33065;33066;33067;33068;33069;33070;33071 21820;21821;21822;21823 21823 3 STPVTSAVQIPEVK IKGTECVKSTPVTSAV AVQIPEVKQDTVSEPV K S T V K Q 1 0 0 0 0 1 1 0 0 1 0 1 0 0 2 2 2 0 0 3 0 14 0 1454.7981 Q96KR1;B5MEH6 Q96KR1 528 541 ZFR Zinc finger RNA-binding protein yes no 2 5.742E-13 104.9 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 78190000 0 17688000 0 13221000 0 47281000 7406 1403 7510 33072;33073;33074 21824;21825;21826;21827 21827 4 STPVTVVLPDTKGK QERGVGIKSTPVTVVL VLPDTKGKSYLFNIMD K S T G K S 0 0 0 1 0 0 0 1 0 0 1 2 0 0 2 1 3 0 0 3 0 14 1 1440.8188 B4DK30;Q15029 B4DK30 148 161 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component yes no 3 0.001842 67.095 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 9462800 1954100 2747300 0 294760 2260500 2206300 7407 92 7511 33075;33076;33077;33078;33079 21828;21829;21830 21828 2 STQESLTAGGTDLK PATRVTRRSTQESLTA TAGGTDLKRELHPPAT R S T L K R 1 0 0 1 0 1 1 2 0 0 2 1 0 0 0 2 3 0 0 0 0 14 0 1406.6889 E9PE58;Q15345-3;Q15345;B5MD92 E9PE58 304 317 LRRC41 Leucine-rich repeat-containing protein 41 yes no 2 1.7362E-55 129.38 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 7429800 0 1781600 1361700 580530 0 3706000 7408 424 7512 33080;33081;33082;33083 21831;21832;21833 21831 3 STQNSFRAESSQTCHSEQGDK AITMQVTKSTQNSFRA CHSEQGDKKMEEKNSG K S T D K K 1 1 1 1 1 3 2 1 1 0 0 1 0 1 0 5 2 0 0 0 0 21 1 2383.0095 P46063 P46063 593 613 RECQL ATP-dependent DNA helicase Q1 yes yes 3 0.00044929 56.347 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 17218000 3324300 2056800 3616900 3088700 2515600 2615900 7409 922 7513 33084;33085;33086;33087;33088;33089 21834 21834 1 STQNSFRAESSQTCHSEQGDKK AITMQVTKSTQNSFRA HSEQGDKKMEEKNSGN K S T K K M 1 1 1 1 1 3 2 1 1 0 0 2 0 1 0 5 2 0 0 0 0 22 2 2511.1044 P46063 P46063 593 614 RECQL ATP-dependent DNA helicase Q1 yes yes 4 0.011756 37.993 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 8371000 1772000 0 2449200 1738000 0 2411800 7410 922 7514 33090;33091;33092;33093 21835 21835 1 STQPISSVGKPASVIK ESEEEDVKSTQPISSV GKPASVIKNVSTKPSN K S T I K N 1 0 0 0 0 1 0 1 0 2 0 2 0 0 2 4 1 0 0 2 0 16 1 1597.9039 Q7Z6E9;Q7Z6E9-2;Q7Z6E9-4 Q7Z6E9 1335 1350 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 3 0.002458 57.148 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 17180000 0 2695700 1839800 0 2030700 10613000 7411 1255 7515 33094;33095;33096;33097 21836;21837 21837 2 STQQDIYAGSVQPILR FDAFYGERSTQQDIYA GSVQPILRHLLEGQNA R S T L R H 1 1 0 1 0 3 0 1 0 2 1 0 0 0 1 2 1 0 1 1 0 16 0 1774.9214 Q14807;B7Z265;H3BRB3;H3BTH5 Q14807 98 113 KIF22 Kinesin-like protein KIF22 yes no 2 1.5856E-37 115.58 By matching By MS/MS By matching By matching By matching By matching 1 22946000 0 22946000 0 0 0 0 7412 1115 7516 33098 21838 21838 1 STRHSANCDRLSESSASPQPK EALQSLRRSTRHSANC SSASPQPKRRQQDTSA R S T P K R 2 2 1 1 1 1 1 0 1 0 1 1 0 0 2 6 1 0 0 0 0 21 2 2314.072 A6NCU2;B7Z227;A6NHW8;Q8N5Y2-2;Q8N5Y2-3;Q8N5Y2 A6NCU2 185 205 MSL3 Male-specific lethal 3 homolog yes no 4 0.019416 35.436 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 6692000 635940 0 2057700 1361500 1006400 1630500 7413 15 7517 33099;33100;33101;33102;33103 21839 21839 1 STRIPGTDAQAQAEDMNVK SVIVTRRRSTRIPGTD QAEDMNVKLEGEPSVR R S T V K L 3 1 1 2 0 2 1 1 0 1 0 1 1 0 1 1 2 0 0 1 0 19 1 2030.9691 Q6PJG2;F6RU81 Q6PJG2 572 590 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes no 3 0.00016979 81.807 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 25172000 2726700 4049300 2314700 2337200 6175100 7568600 7414 1231 7518 33104;33105;33106;33107;33108;33109;33110 21840;21841;21842;21843;21844 21843 4 STRLSGAAPAHSAADPWEK PTHSLSQKSTRLSGAA SAADPWEKEHHRLSVR K S T E K E 5 1 0 1 0 0 1 1 1 0 1 1 0 0 2 3 1 1 0 0 0 19 1 1950.9548 I3L476;Q9BSJ6-2;I3L1U3;I3L419;Q9BSJ6;I3L156 I3L476 140 158 FAM64A Protein FAM64A yes no 3;4 0.0053873 45.916 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 3 16114000 0 3871400 3589000 0 0 8653800 7415 680 7519 33111;33112;33113;33114;33115;33116;33117 21845;21846 21846 2 STRQTTITSHFAK PSPRITRKSTRQTTIT TITSHFAKGPAKRKPQ K S T A K G 1 1 0 0 0 1 0 0 1 1 0 1 0 1 0 2 4 0 0 0 0 13 1 1476.7685 F5GX68 F5GX68 161 173 DNMT1 Cytosine-specific methyltransferase no no 3 0.0015585 88.224 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 26616000 2251300 4087100 4989000 1986000 5788100 7514800 7416 487 7520 33118;33119;33120;33121;33122;33123 21847;21848;21849;21850;21851;21852 21847 6 STRQTTITSHFAKGPAK PSPRITRKSTRQTTIT HFAKGPAKRKPQEESE K S T A K R 2 1 0 0 0 1 0 1 1 1 0 2 0 1 1 2 4 0 0 0 0 17 2 1829.9748 F5GX68 F5GX68 161 177 DNMT1 Cytosine-specific methyltransferase no no 4 9.5441E-08 91.616 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 1 1 16150000 4118000 3949800 5457200 201060 0 2424200 7417 487 7521 33124;33125;33126;33127;33128;33129 21853;21854;21855;21856;21857;21858 21856 6 STSEDSLVKQECIKEVVEK FTLRNTLKSTSEDSLV CIKEVVEKREACHCEE K S T E K R 0 0 0 1 1 1 4 0 0 1 1 3 0 0 0 3 1 0 0 3 0 19 2 2207.0991 Q9Y2M0-2;Q9Y2M0;H3BQ24 Q9Y2M0-2 277 295 FAN1 Fanconi-associated nuclease 1 yes no 3 3.8025E-100 135.57 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 13394000 4630400 0 8763600 0 0 0 7418 1634 7522 33130;33131 21859;21860;21861;21862 21862 4 STSGEGFQFGK FTFADLAKSTSGEGFQ GEGFQFGKKDPNFKGF K S T G K K 0 0 0 0 0 1 1 3 0 0 0 1 0 2 0 2 1 0 0 0 0 11 0 1143.5197 P49792;E9PGT0;P0DJD0;P0DJD1;F8VYC4;Q99666;O14715;Q7Z3J3;B4DZH4 P49792 1953 1963 RANBP2;RGPD1;RGPD2;RGPD5;RGPD8;RGPD4 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RanBP2-like and GRIP domain-containing protein 4 no no 2 1.7548E-69 144.7 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2 1 62458000 15820000 7955000 9484300 5212200 10735000 13251000 7419 945;1251 7523 33132;33133;33134;33135;33136;33137;33138;33139 21863;21864;21865;21866;21867;21868 21865 6 STSLASVSQLASK TSGSLVSKSTSLASVS SVSQLASKSSSQTSTS K S T S K S 2 0 0 0 0 1 0 0 0 0 2 1 0 0 0 5 1 0 0 1 0 13 0 1277.6827 Q9NXV6 Q9NXV6 387 399 CDKN2AIP CDKN2A-interacting protein yes yes 2 3.7619E-181 167.22 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 97972000 43963000 6940200 24054000 6901600 5284500 10828000 7420 1560 7524 33140;33141;33142;33143;33144;33145 21869;21870;21871;21872;21873 21873 5 STSQVAASLLASK NTSLLTSKSTSQVAAS AASLLASKSSSQTSGS K S T S K S 3 0 0 0 0 1 0 0 0 0 2 1 0 0 0 4 1 0 0 1 0 13 0 1261.6878 Q9NXV6 Q9NXV6 362 374 CDKN2AIP CDKN2A-interacting protein yes yes 2 7.626E-60 132.97 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 126330000 41183000 7917700 35744000 10208000 10093000 21181000 7421 1560 7525 33146;33147;33148;33149;33150;33151 21874;21875;21876;21877;21878;21879 21877 6 STSSFSCLSR VVSGGSRRSTSSFSCL SSFSCLSRHGGGGGGF R S T S R H 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 5 1 0 0 0 0 10 0 1130.5026 P35908;CON__P35908 P35908 36 45 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 0.0028315 96.113 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 271290000 24374000 34675000 52835000 32420000 40820000 86168000 + 7422 302 7526 33152;33153;33154;33155;33156;33157;33158 21880;21881;21882;21883;21884;21885;21886 21880 7 STSSFSCLSRHGGGGGGFGGGGFGSR VVSGGSRRSTSSFSCL GGGGFGSRSLVGLGGT R S T S R S 0 2 0 0 1 0 0 11 1 0 1 0 0 3 0 6 1 0 0 0 0 26 1 2432.0676 P35908;CON__P35908 P35908 36 61 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3;4 3.9296E-51 102.29 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 77461000 4988800 7639100 41944000 13522000 3860500 5506400 + 7423 302 7527 33159;33160;33161;33162;33163;33164;33165;33166;33167;33168;33169;33170 21887;21888;21889;21890;21891;21892;21893;21894;21895 21894 8 STSSFSCLSRHGGGGGGFGGGGFGSRSLVGLGGTK VVSGGSRRSTSSFSCL LVGLGGTKSISISVAG R S T T K S 0 2 0 0 1 0 0 14 1 0 3 1 0 3 0 7 2 0 0 1 0 35 2 3244.5432 P35908;CON__P35908 P35908 36 70 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 4 4.7632E-17 54.241 By matching By matching By matching By MS/MS By matching By matching 1 27341000 0 0 0 27341000 0 0 + 7424 302 7528 33171 21896 21896 1 STSVTTTSSASVTTTSNASGRR SAGSVSPRSTSVTTTS TSNASGRRTSDVRRP_ R S T R R T 2 2 1 0 0 0 0 1 0 0 0 0 0 0 0 7 7 0 0 2 0 22 1 2158.0462 P13646;CON__P13646-1 P13646 430 451 KRT13 Keratin, type I cytoskeletal 13 yes no 3 0.0020161 46.514 By matching By matching By matching By matching By matching By MS/MS 1 1 3380600 0 0 0 0 2396100 984550 + 7425 834 7529 33172;33173 21897 21897 1 STTPGGTGIKPFLER LQSQSKDKSTTPGGTG GIKPFLERFGERCQEH K S T E R F 0 1 0 0 0 0 1 3 0 1 1 1 0 1 2 1 3 0 0 0 0 15 1 1559.8308 Q9NQW6;Q9NQW6-2 Q9NQW6 362 376 ANLN Actin-binding protein anillin yes no 3 0.00056631 82.483 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 147740000 40380000 15400000 45907000 9106600 13345000 23600000 7426 1533 7530 33174;33175;33176;33177;33178;33179 21898;21899;21900;21901;21902;21903 21899 6 STTQANRMSVDAVEIETLRK AAEMHKMKSTTQANRM VEIETLRKTVEDYFCF K S T R K T 2 2 1 1 0 1 2 0 0 1 1 1 1 0 0 2 3 0 0 2 0 20 2 2248.1481 P78347-2;P78347-4;P78347-3;B4DH52;P78347;Q86U51 P78347-2 95 114 GTF2I General transcription factor II-I yes no 3;4 3.8729E-06 86.136 By matching By MS/MS By matching By matching By matching By matching 2 2 10386000 0 6586700 0 3799400 0 0 7427 90 7531 33180;33181;33182;33183 21904;21905 21905 2 STTSTIESFAAQEK KEERELLRSTTSTIES ESFAAQEKQMEVCEVC R S T E K Q 2 0 0 0 0 1 2 0 0 1 0 1 0 1 0 3 3 0 0 0 0 14 0 1498.7151 O95232;B4DJ96;F5H1W9 O95232 174 187 LUC7L3 Luc7-like protein 3 yes no 2 0.00054782 87.363 By matching By matching By matching By matching By matching By MS/MS 1 1187700 0 0 0 0 0 1187700 7428 766 7532 33184 21906 21906 1 STTTGHLIYK IGHVDSGKSTTTGHLI TTGHLIYKCGGIDKRT K S T Y K C 0 0 0 0 0 0 0 1 1 1 1 1 0 0 0 1 3 0 1 0 0 10 0 1119.5924 Q5VTE0;P68104;Q6IQ15;F8W6I0;Q05639;A6PW80;Q5JR01;E7EPH7 Q5VTE0 21 30 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2 5.1557E-05 108.43 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 1 2 1 2 1 680480000 114180000 99455000 125240000 59747000 117540000 164320000 7429 1006 7533 33185;33186;33187;33188;33189;33190;33191;33192;33193;33194 21907;21908;21909;21910;21911;21912 21911 6 STVASMMHRQETVECLRK KHPWVCQRSTVASMMH ETVECLRKFNARRKLK R S T R K F 1 2 0 0 1 1 2 0 1 0 1 1 2 0 0 2 2 0 0 2 0 18 2 2162.0395 H0Y6G2;Q8WU40;Q13555-10;Q5SWX3;Q13555-3;Q13555-5;Q13555-4;Q13555-7;Q13555-9;Q13555-2;Q13555-8;Q13555;Q13555-6 H0Y6G2 55 72 CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit gamma yes no 4 0.0038953 47.537 By matching By matching By matching By matching By MS/MS By matching 1 1 1 5926100 0 0 828020 0 2948000 2150100 7430 612 7534 33195;33196;33197 21913 21913 1 STVHEILCK ________________ TVHEILCKLSLEGDHS M S T C K L 0 0 0 0 1 0 1 0 1 1 1 1 0 0 0 1 1 0 0 1 0 9 0 1085.5539 H0YKS4;H0YMD0;H0YMU9;H0YN42;P07355;H0YKV8;H0YKL9;H0YKZ7;H0YLV6;H0YMT9;H0YKX9;H0YMM1;A6NMY6;P07355-2;H0YNB8;H0YMD9;H0YKN4;H0YMW4;H0YNP5 H0YKS4 2 10 ANXA2;ANXA2P2 Annexin;Annexin A2;Putative annexin A2-like protein yes no 2 9.9915E-07 113.62 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 10182000 1740300 0 0 0 1875400 6566400 7431 626 7535 33198;33199;33200 21914;21915;21916 21915 3 STVSEQADKENNLENEK ILDSVQGKSTVSEQAD ENNLENEKMVKNKPDF K S T E K M 1 0 3 1 0 1 4 0 0 0 1 2 0 0 0 2 1 0 0 1 0 17 1 1933.8865 Q562F6-2;Q562F6 Q562F6-2 1107 1123 SGOL2 Shugoshin-like 2 yes no 3 0.003144 66.977 By matching By matching By matching By MS/MS By matching By matching 1 1 4205600 0 0 3560800 644810 0 0 7432 1175 7536 33201;33202 21917 21917 1 STVVDNDADFQGTK DKESVEQRSTVVDNDA DADFQGTKRACRCLIL R S T T K R 1 0 1 3 0 1 0 1 0 0 0 1 0 1 0 1 2 0 0 2 0 14 0 1495.6791 Q8IYH5-2;Q8IYH5;Q8IYH5-4 Q8IYH5-2 148 161 ZZZ3 ZZ-type zinc finger-containing protein 3 yes no 2 5.327E-20 109.1 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 13780000 1065100 2225100 1799400 483450 1371400 6835800 7433 1290 7537 33203;33204;33205;33206;33207;33208;33209 21918;21919;21920;21921;21922;21923;21924 21920 7 STVVEGGEVRFNGK DPGADSEKSTVVEGGE GEVRFNGKGKKIRKPR K S T G K G 0 1 1 0 0 0 2 3 0 0 0 1 0 1 0 1 1 0 0 3 0 14 1 1477.7525 P56177;F8VXJ2 P56177 111 124 DLX1 Homeobox protein DLX-1 yes no 3 0.012394 49.356 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2187000 192430 628200 0 205360 0 1161000 7434 972 7538 33210;33211;33212;33213 21925 21925 1 STVVEGGEVRFNGKGK DPGADSEKSTVVEGGE VRFNGKGKKIRKPRTI K S T G K K 0 1 1 0 0 0 2 4 0 0 0 2 0 1 0 1 1 0 0 3 0 16 2 1662.8689 P56177;F8VXJ2 P56177 111 126 DLX1 Homeobox protein DLX-1 yes no 3 0.00089866 83.877 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 15796000 2416500 2298000 3778900 1733200 1920600 3648500 7435 972 7539 33214;33215;33216;33217;33218;33219 21926;21927;21928;21929 21926 4 STVVPVPYEK CYGKALGKSTVVPVPY VVPVPYEKMLRDQSAV K S T E K M 0 0 0 0 0 0 1 0 0 0 0 1 0 0 2 1 1 0 1 3 0 10 0 1117.6019 P78347-2;P78347-4;P78347-3;B4DH52;P78347;Q86U51 P78347-2 131 140 GTF2I General transcription factor II-I yes no 2 0.010222 73.885 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 27211000 4762000 8703800 5828000 338210 3158800 4420100 7436 90 7540 33220;33221;33222;33223;33224;33225 21930;21931;21932 21931 3 STVYPIFSASSVNSK ENKTISPKSTVYPIFS SASSVNSKRSLGEEQF K S T S K R 1 0 1 0 0 0 0 0 0 1 0 1 0 1 1 5 1 0 1 2 0 15 0 1585.7988 Q56NI9;H0YB88 Q56NI9 323 337 ESCO2 N-acetyltransferase ESCO2 yes no 2 0.0022036 66.826 By matching By matching By matching By MS/MS By matching By matching 1 8554300 0 0 0 8554300 0 0 7437 1176 7541 33226 21933 21933 1 STYEQVDLIGK NVAKKYMKSTYEQVDL EQVDLIGKKTQKTAIT K S T G K K 0 0 0 1 0 1 1 1 0 1 1 1 0 0 0 1 1 0 1 1 0 11 0 1251.6347 Q9NR30;Q9NR30-2 Q9NR30 392 402 DDX21 Nucleolar RNA helicase 2 yes no 2 1.6311E-20 123.67 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 23324000 0 0 10614000 5140100 0 7570600 7438 1534 7542 33227;33228;33229 21934;21935;21936 21934 3 STYEQVDLIGKK NVAKKYMKSTYEQVDL QVDLIGKKTQKTAITV K S T K K T 0 0 0 1 0 1 1 1 0 1 1 2 0 0 0 1 1 0 1 1 0 12 1 1379.7296 Q9NR30;Q9NR30-2 Q9NR30 392 403 DDX21 Nucleolar RNA helicase 2 yes no 3 4.2653E-12 107.34 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 9042800 0 0 1455800 2031500 3759000 1796500 7439 1534 7543 33230;33231;33232;33233 21937;21938 21938 2 SVAETPVHKQISK GYHKLLTKSVAETPVH PVHKQISKRLLHRQIK K S V S K R 1 0 0 0 0 1 1 0 1 1 0 2 0 0 1 2 1 0 0 2 0 13 1 1422.7831 Q7Z2Z1-2;Q7Z2Z1 Q7Z2Z1-2 964 976 TICRR Treslin yes no 3 0.0088302 56.956 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 4540900 0 837970 1836600 713530 395240 757550 7440 1249 7544 33234;33235;33236;33237;33238 21939;21940 21939 2 SVAFAAPR ________________ SVAFAAPRQRGKGEIT M S V P R Q 3 1 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 8 0 817.44464 Q15532-2;Q15532 Q15532-2 2 9 SS18 Protein SSXT yes no 2 0.015273 71.501 By matching By matching By matching By matching By matching By MS/MS 1 1 2923200 0 0 0 538090 0 2385100 7441 1140 7545 33239;33240 21941 21941 1 SVAHGQAPEMPLVK LRATSPSKSVAHGQAP APEMPLVKKKKKKKKG K S V V K K 2 0 0 0 0 1 1 1 1 0 1 1 1 0 2 1 0 0 0 2 0 14 0 1462.7602 Q1ED39;H3BMC9 Q1ED39 52 65 KNOP1 Lysine-rich nucleolar protein 1 yes no 3 0.00092241 72.898 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 21648000 2540700 2542100 2123200 1262300 6263700 6916200 7442 1157 7546 33241;33242;33243;33244;33245;33246 21942;21943;21944;21945 21942 4 SVAHGQAPEMPLVKK LRATSPSKSVAHGQAP PEMPLVKKKKKKKKGV K S V K K K 2 0 0 0 0 1 1 1 1 0 1 2 1 0 2 1 0 0 0 2 0 15 1 1590.8552 Q1ED39;H3BMC9 Q1ED39 52 66 KNOP1 Lysine-rich nucleolar protein 1 yes no 3 0.026101 35.711 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 8530100 0 830320 1242000 737740 1930700 3789300 7443 1157 7547 33247;33248;33249;33250;33251 21946 21946 1 SVDFHFRTDER KSVSQVTKSVDFHFRT FHFRTDERIKQHPKNQ K S V E R I 0 2 0 2 0 0 1 0 1 0 0 0 0 2 0 1 1 0 0 1 0 11 1 1407.6531 Q9ULW0;Q96RR5 Q9ULW0 257 267 TPX2;HCA90 Targeting protein for Xklp2 yes no 3 0.017384 57.785 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 70522000 4433000 9124900 8389700 4405700 14729000 29439000 7444 1611 7548 33252;33253;33254;33255;33256;33257 21947;21948;21949 21948 3 SVEDDKEGHLVCR QSSKRSSRSVEDDKEG KEGHLVCRIGDWLQER R S V C R I 0 1 0 2 1 0 2 1 1 0 1 1 0 0 0 1 0 0 0 2 0 13 1 1542.7097 P49761-1;P49761;H3BUL5;H3BVF8;H3BQG1;P49761-3;G5E959 P49761-1 135 147 CLK3 Dual specificity protein kinase CLK3 yes no 3 0.015308 51.612 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 3205600 0 0 887980 429890 663620 1224100 7445 944 7549 33258;33259;33260;33261 21950 21950 1 SVEDRFDQQK EDEKRRRKSVEDRFDQ EDRFDQQKNDYDQLQK K S V Q K N 0 1 0 2 0 2 1 0 0 0 0 1 0 1 0 1 0 0 0 1 0 10 1 1250.5891 P15924;P15924-2;H7BYR0 P15924 1127 1136 DSP Desmoplakin yes no 2 0.022039 82.261 By matching By matching By matching By matching By matching By MS/MS 1 1753600 0 0 0 0 0 1753600 7446 840 7550 33262 21951 21951 1 SVEDRFDQQKNDYDQLQK EDEKRRRKSVEDRFDQ NDYDQLQKARQCEKEN K S V Q K A 0 1 1 4 0 4 1 0 0 0 1 2 0 1 0 1 0 0 1 1 0 18 2 2255.0455 P15924;P15924-2;H7BYR0 P15924 1127 1144 DSP Desmoplakin yes no 3 0.016573 46.543 By matching By matching By MS/MS By matching By matching By matching 1 1 1085700 0 0 742130 343520 0 0 7447 840 7551 33263;33264 21952 21952 1 SVEESYITSEHCYQKPR PLALPLPRSVEESYIT EHCYQKPRAYYPAVEQ R S V P R A 0 1 0 0 1 1 3 0 1 1 0 1 0 0 1 3 1 0 2 1 0 17 1 2111.9582 Q9BVI0 Q9BVI0 829 845 PHF20 PHD finger protein 20 yes yes 3 0.0017667 59.884 By matching By MS/MS By matching By matching By MS/MS By matching 2 2 1 1 1 6395500 1411300 1603200 574210 0 1362700 1444200 7448 1454 7552 33265;33266;33267;33268;33269;33270;33271 21953;21954 21953 2 SVELDLNQAHMEETPK ISPERRCRSVELDLNQ AHMEETPKRKGAKVFG R S V P K R 1 0 1 1 0 1 3 0 1 0 2 1 1 0 1 1 1 0 0 1 0 16 0 1839.8673 F5H2R4;F5H0Y0;F5H689;Q14680;B7Z6Y0;B7Z7Q1;A6P3A8;A6P3A7 F5H2R4 434 449 MELK Maternal embryonic leucine zipper kinase yes no 3 0.00024377 71.531 By matching By matching By matching By matching By matching By MS/MS 1 1400000 0 0 0 0 0 1400000 7449 507 7553 33272 21955 21955 1 SVELNPTQK KAVECYRRSVELNPTQ VELNPTQKDLVLKIAE R S V Q K D 0 0 1 0 0 1 1 0 0 0 1 1 0 0 1 1 1 0 0 1 0 9 0 1014.5346 P49792;E9PGT0;Q99666;O14715;Q99666-2;F8W705;C9J1W9;C9JF75;C9J6W1;Q7Z3J3-2;C9J149;Q7Z3J3 P49792 86 94 RANBP2;RGPD5;RGPD8;RGPD6;RGPD4 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RanBP2-like and GRIP domain-containing protein 4 no no 2 0.012404 81.525 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 12822000 854490 1009400 0 925930 3434800 6597200 7450 945;1251 7554 33273;33274;33275;33276;33277 21956;21957;21958 21956 3 SVENAVCVLR DAGKCEDKSVENAVCV ENAVCVLRNLSYRLYD K S V L R N 1 1 1 0 1 0 1 0 0 0 1 0 0 0 0 1 0 0 0 3 0 10 0 1145.5863 Q9Y446 Q9Y446 523 532 PKP3 Plakophilin-3 yes yes 2 2.2826E-09 117.52 By matching By MS/MS By matching By matching By matching By matching 1 2754800 0 2754800 0 0 0 0 7451 1650 7555 33278 21959 21959 1 SVEPQDAGPLER VDEGPQPRSVEPQDAG QDAGPLERSQGDEAGG R S V E R S 1 1 0 1 0 1 2 1 0 0 1 0 0 0 2 1 0 0 0 1 0 12 0 1296.631 E7ESW4;Q9NZT2-2;Q9NZT2;Q4VXW4 E7ESW4 204 215 OGFR Opioid growth factor receptor yes no 2 0.0018096 80.69 By matching By matching By matching By matching By matching By MS/MS 1 1 2278900 0 908360 0 0 0 1370500 7452 376 7556 33279;33280 21960 21960 1 SVESNIEDK KSERVHSKSVESNIED VESNIEDKIFGKTYRK K S V D K I 0 0 1 1 0 0 2 0 0 1 0 1 0 0 0 2 0 0 0 1 0 9 0 1019.4771 E9PFZ0;P38398-4;P38398-2;P38398;E9PFC7;E7EP70;F8W8H7;E7EMP0;E9PH68;E7EWN5;Q3B891;C9IZW4 E9PFZ0 404 412 BRCA1 Breast cancer type 1 susceptibility protein yes no 2 0.036116 61.765 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 3219500 634760 940230 0 327770 0 1316800 7453 426 7557 33281;33282;33283;33284 21961 21961 1 SVEYEGDLK RLDTKEEKSVEYEGDL VEYEGDLKSGTAETEP K S V L K S 0 0 0 1 0 0 2 1 0 0 1 1 0 0 0 1 0 0 1 1 0 9 0 1038.487 Q12888;Q12888-2;A6NNK5;F8VY86;C9JXV0;H7C3N7 Q12888 809 817 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.018678 70.552 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 27229000 0 3899800 6013600 2632600 3832200 10851000 7454 1063 7558 33285;33286;33287;33288;33289 21962;21963 21962 2 SVGFIGAGQLAFALAK ________________ QLAFALAKGFTAAGVL M S V A K G 4 0 0 0 0 1 0 3 0 1 2 1 0 2 0 1 0 0 0 1 0 16 0 1548.8664 P32322;E2QRB3;A6NFM2;B4DMU0 P32322 2 17 PYCR1 Pyrroline-5-carboxylate reductase 1, mitochondrial;Pyrroline-5-carboxylate reductase yes no 2 5.1104E-118 142.95 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 510070000 319530000 92241000 94229000 0 4073300 0 7455 890 7559 33290;33291;33292;33293 21964;21965;21966;21967 21967 4 SVGGACVLVA RRAEEKIKSVGGACVL GGACVLVA________ K S V V A - 2 0 0 0 1 0 0 2 0 0 1 0 0 0 0 1 0 0 0 3 0 10 0 931.4797 E9PJD9;P46776;E9PLX7 E9PJD9 82 91 RPL27A 60S ribosomal protein L27a yes no 1 0.0051242 60.76 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 4723100 2365300 0 0 380830 1454400 522570 7456 447 7560 33294;33295;33296;33297 21968;21969;21970 21968 3 SVGGSGGGSFGDNLVTR VTVTRSYRSVGGSGGG FGDNLVTRSYLLGNSS R S V T R S 0 1 1 1 0 0 0 6 0 0 1 0 0 1 0 3 1 0 0 2 0 17 0 1565.7434 P02545;P02545-3;D6RAQ3;E7EUI9 P02545 628 644 LMNA Prelamin-A/C;Lamin-A/C yes no 2 6.559E-32 109.87 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 1 166450000 20253000 22337000 19127000 9138000 12825000 82771000 7457 783 7561 33298;33299;33300;33301;33302;33303;33304;33305;33306;33307 21971;21972;21973;21974;21975;21976;21977;21978;21979;21980;21981 21980 11 SVGPDFGK RLQRAPLKSVGPDFGK SVGPDFGKKRLGLPGD K S V G K K 0 0 0 1 0 0 0 2 0 0 0 1 0 1 1 1 0 0 0 1 0 8 0 805.39702 P78527;E7EUY0;P78527-2 P78527 2695 2702 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.02567 74.92 By matching By matching By matching By matching By matching By MS/MS 1 1 5716000 0 0 0 1247800 0 4468200 7458 1012 7562 33308;33309 21982 21982 1 SVGPDFGKK RLQRAPLKSVGPDFGK VGPDFGKKRLGLPGDE K S V K K R 0 0 0 1 0 0 0 2 0 0 0 2 0 1 1 1 0 0 0 1 0 9 1 933.49198 P78527;E7EUY0;P78527-2 P78527 2695 2703 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.03179 92.051 By matching By matching By MS/MS By matching By matching By matching 1 1 2268700 0 851630 1417000 0 0 0 7459 1012 7563 33310;33311 21983 21983 1 SVIELQQYAK VKQETSDKSVIELQQY IELQQYAKKNKPNLHI K S V A K K 1 0 0 0 0 2 1 0 0 1 1 1 0 0 0 1 0 0 1 1 0 10 0 1177.6343 Q8WYQ5-3;Q8WYQ5 Q8WYQ5-3 681 690 DGCR8 Microprocessor complex subunit DGCR8 yes no 2 7.036E-09 114.4 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 2 7016400 0 1776400 0 351410 0 4888500 7460 1346 7564 33312;33313;33314;33315 21984;21985 21985 2 SVIYHALSQK ________________ IYHALSQKEANDSDVQ K S V Q K E 1 0 0 0 0 1 0 0 1 1 1 1 0 0 0 2 0 0 1 1 0 10 0 1144.6241 O95707 O95707 3 12 POP4 Ribonuclease P protein subunit p29 yes yes 2 6.3392E-09 126.03 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 1 1 18932000 2067700 2092000 2407000 2056500 3784100 6524900 7461 773 7565 33316;33317;33318;33319;33320;33321;33322 21986;21987;21988;21989;21990 21989 5 SVKEDSNLTLQEK PDKMKKSKSVKEDSNL SNLTLQEKKEKIQTGL K S V E K K 0 0 1 1 0 1 2 0 0 0 2 2 0 0 0 2 1 0 0 1 0 13 1 1489.7624 P46940;H0YLE8 P46940 1443 1455 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 2;3 2.0926E-23 113.37 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 2 2 2 1 2 37856000 8010000 5284400 10655000 5561900 2248400 6096300 7462 929 7566 33323;33324;33325;33326;33327;33328;33329;33330;33331;33332;33333;33334 21991;21992;21993;21994;21995;21996;21997;21998;21999 21991 9 SVKKPAPPPAPPQATK PPGKAGEKSVKKPAPP PAPPQATKTTAPVPEP K S V T K T 3 0 0 0 0 1 0 0 0 0 0 3 0 0 6 1 1 0 0 1 0 16 2 1612.9301 Q86VM9;E7ERS3;Q86VM9-2;H7BXJ7;H3BRN6 Q86VM9 636 651 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 3 0.019097 47.855 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 4145000 0 153220 1516600 260690 2214500 0 7463 372 7567 33335;33336;33337;33338 22000 22000 1 SVLDHQNNEGASCDWK EDSSSPVKSVLDHQNN EGASCDWKKPFPKIPE K S V W K K 1 0 2 2 1 1 1 1 1 0 1 1 0 0 0 2 0 1 0 1 0 16 0 1858.7904 Q96AY2;Q96AY2-2 Q96AY2 121 136 EME1 Crossover junction endonuclease EME1 yes no 3 0.0021325 61.649 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3090700 361180 828120 0 233720 0 1667600 7464 1368 7568 33339;33340;33341;33342 22001 22001 1 SVLEPQAVPDPEEGSSAPR QSRQEVVRSVLEPQAV EEGSSAPRSWKGMNSQ R S V P R S 2 1 0 1 0 1 3 1 0 0 1 0 0 0 4 3 0 0 0 2 0 19 0 1963.9487 Q86UT8 Q86UT8 168 186 CCDC84 Coiled-coil domain-containing protein 84 yes yes 2 4.2517E-17 96.391 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 44057000 8934800 0 12331000 782880 3016100 18992000 7465 1263 7569 33343;33344;33345;33346;33347 22002;22003;22004;22005;22006 22002 5 SVLEPQAVPDPEEGSSAPRSWK QSRQEVVRSVLEPQAV SSAPRSWKGMNSQVAS R S V W K G 2 1 0 1 0 1 3 1 0 0 1 1 0 0 4 4 0 1 0 2 0 22 1 2365.155 Q86UT8 Q86UT8 168 189 CCDC84 Coiled-coil domain-containing protein 84 yes yes 3 1.1188E-05 60.561 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 17798000 3763200 14035000 0 0 0 0 7466 1263 7570 33348;33349 22007;22008 22008 2 SVLMERLK NLDTGGNKSVLMERLK SVLMERLKKAVKEEGQ K S V L K K 0 1 0 0 0 0 1 0 0 0 2 1 1 0 0 1 0 0 0 1 0 8 1 974.55829 Q14151;A8MXT5;C9JPX0;B4DU53;F5GXS4;Q15424;F5H1L1;F5H0H3;B7Z959 Q14151 54 61 SAFB2;SAFB Scaffold attachment factor B2;Scaffold attachment factor B1 no no 2 0.040186 84.743 By matching By matching By matching By MS/MS By matching By matching 1 1080600 0 0 0 1080600 0 0 7467 1097;1137 7571 33350 22009 22009 1 SVLNTQPEQTNAGEVASSLSSTEIRR VKKTRRPRSVLNTQPE LSSTEIRRHSQRRHTS R S V R R H 2 2 2 0 0 2 3 1 0 1 2 0 0 0 1 5 3 0 0 2 0 26 1 2773.3842 Q9BZ95-4;C9JY66;Q9BZ95-2;B7ZL11;Q9BZ95;Q9BZ95-3 Q9BZ95-4 361 386 WHSC1L1 Histone-lysine N-methyltransferase NSD3 yes no 3 3.1588E-21 83.395 By matching By matching By matching By matching By matching By MS/MS 1 15180000 0 0 0 0 0 15180000 7468 210 7572 33351 22010 22010 1 SVLTDPAKLKK IQNAPSRKSVLTDPAK TDPAKLKKLQQSGEAF K S V K K L 1 0 0 1 0 0 0 0 0 0 2 3 0 0 1 1 1 0 0 1 0 11 2 1198.7285 Q9Y4C1;F5H4E6;F5H070;F8WE62 Q9Y4C1 512 522 KDM3A Lysine-specific demethylase 3A yes no 3 0.0073869 87.789 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 5848200 0 1095600 1606600 599590 1006700 1539700 7469 516 7573 33352;33353;33354;33355;33356 22011;22012 22011 2 SVNGSVAEEAPCK PEADGAPKSVNGSVAE VAEEAPCKEVQSSCRV K S V C K E 2 0 1 0 1 0 2 1 0 0 0 1 0 0 1 2 0 0 0 2 0 13 0 1346.6136 Q02040 Q02040 511 523 AKAP17A A-kinase anchor protein 17A yes yes 2 0.026604 69.314 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 7470 1032 7574 33357 22013 22013 1 SVNYAAGLSPYADKGK ________________ SPYADKGKCGLPERGP M S V G K C 3 0 1 1 0 0 0 2 0 0 1 2 0 0 1 2 0 0 2 1 0 16 1 1639.8206 Q8N6T7-4;Q8N6T7-2;Q8N6T7 Q8N6T7-4 2 17 SIRT6 NAD-dependent protein deacetylase sirtuin-6 yes no 2 1.0401E-163 157.83 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 65046000 0 0 11535000 13337000 13977000 26197000 7471 1306 7575 33358;33359;33360;33361;33362 22014;22015;22016;22017;22018 22017 5 SVPADLSRPK EVKKMTAKSVPADLSR PADLSRPKSTSTSSMK K S V P K S 1 1 0 1 0 0 0 0 0 0 1 1 0 0 2 2 0 0 0 1 0 10 1 1068.5928 E7EVA0;P27816-6;P27816;P27816-2;P27816-4;E9PGM5;P27816-5;B9ZVR1;H0Y2V1;B4DSQ1;H7C4C5;B5MEG9 E7EVA0 1998 2007 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.033862 69.672 By matching By matching By matching By matching By matching By MS/MS 1 1 1 7474000 3694100 1833900 0 0 0 1946000 7472 388 7576 33363;33364;33365 22019 22019 1 SVPGTTSSPLVGDISPK SVSQDFSRSVPGTTSS LVGDISPKSSPHEVKF R S V P K S 0 0 0 1 0 0 0 2 0 1 1 1 0 0 3 4 2 0 0 2 0 17 0 1640.8621 B4DZR9;Q9UQR0;B4DRC2;H0Y6S1;Q9UQR0-2 B4DZR9 544 560 SCML2 Sex comb on midleg-like protein 2 yes no 2 1.0973E-21 105 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 157900000 41300000 26470000 11522000 16914000 14863000 46827000 7473 149 7577 33366;33367;33368;33369;33370;33371 22020;22021;22022;22023;22024 22023 5 SVPGVCGASQTHQKPQNGEK LDFFGNKKSVPGVCGA QKPQNGEKKEESLTER K S V E K K 1 0 1 0 1 3 1 3 1 0 0 2 0 0 2 2 1 0 0 2 0 20 1 2108.0069 Q9Y2R4;F5H5G9;F5H0R7 Q9Y2R4 54 73 DDX52 Probable ATP-dependent RNA helicase DDX52 yes no 3;4 0.00011662 75.682 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 3 2 2 2 2 2 110640000 17886000 18953000 17955000 12433000 17286000 26131000 7474 1635 7578 33372;33373;33374;33375;33376;33377;33378;33379;33380;33381;33382;33383;33384 22025;22026;22027;22028;22029;22030 22026 6 SVPTTQCLDNSK VSRYGELKSVPTTQCL TQCLDNSKKNESPFWK K S V S K K 0 0 1 1 1 1 0 0 0 0 1 1 0 0 1 2 2 0 0 1 0 12 0 1348.6293 P46013;F5H4V4 P46013 220 231 MKI67 Antigen KI-67 yes no 2 2.7076E-07 103.43 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 92377000 10444000 17085000 15086000 6892400 11138000 31733000 7475 919 7579 33385;33386;33387;33388;33389;33390 22031;22032;22033;22034 22034 3 SVPTTQCLDNSKK VSRYGELKSVPTTQCL QCLDNSKKNESPFWKL K S V K K N 0 0 1 1 1 1 0 0 0 0 1 2 0 0 1 2 2 0 0 1 0 13 1 1476.7242 P46013;F5H4V4 P46013 220 232 MKI67 Antigen KI-67 yes no 3 0.0011552 67.952 By MS/MS By MS/MS By MS/MS By matching By matching By matching 2 1 1 1 4707300 984330 1510500 1073600 0 1138800 0 7476 919 7580 33391;33392;33393;33394;33395 22035;22036;22037;22038 22036 3 SVPVTKPVPVTKPITVTK TKPITVTKSVPVTKPV TKPITVTKLVTVTKPV K S V T K L 0 0 0 0 0 0 0 0 0 1 0 3 0 0 4 1 4 0 0 5 0 18 2 1890.1554 Q96KM6 Q96KM6 263 280 ZNF512B Zinc finger protein 512B yes yes 3;4 2.4457E-14 99.915 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 2 2 138670000 11681000 22474000 11555000 20345000 12818000 59795000 7477 1402 7581 33396;33397;33398;33399;33400;33401;33402;33403;33404;33405 22039;22040;22041;22042;22043;22044;22045;22046;22047;22048 22042 10 SVQNSHFKEPLVSDEK SCELRNLKSVQNSHFK EPLVSDEKSSELIITD K S V E K S 0 0 1 1 0 1 2 0 1 0 1 2 0 1 1 3 0 0 0 2 0 16 1 1842.9112 P33981-2;P33981 P33981-2 329 344 TTK Dual specificity protein kinase TTK yes no 3;4 0.00072391 81.651 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 2 1 2 42084000 0 10730000 6715200 4393400 2375200 17870000 7478 891 7582 33406;33407;33408;33409;33410;33411;33412;33413;33414 22049;22050;22051;22052;22053 22052 5 SVQPTSEERIPK FKSKISRKSVQPTSEE TSEERIPKTIEIKSIT K S V P K T 0 1 0 0 0 1 2 0 0 1 0 1 0 0 2 2 1 0 0 1 0 12 1 1369.7201 Q9UHD8-3;Q9UHD8-7;Q9UHD8-2;Q9UHD8-5;Q9UHD8;F5GWR9;Q9UHD8-4;Q9UHD8-9;Q9UHD8-8 Q9UHD8-3 163 174 SEPT9 Septin-9 yes no 3 0.0057944 63.662 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 10719000 0 0 4167100 0 3019500 3532500 7479 1593 7583 33415;33416;33417 22054;22055;22056 22054 3 SVREECIPMK EEAAENPKSVREECIP REECIPMKRRRRAKLC K S V M K R 0 1 0 0 1 0 2 0 0 1 0 1 1 0 1 1 0 0 0 1 0 10 1 1247.6002 O96028-5;O96028-3;O96028;O96028-6 O96028-5 389 398 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 3 0.021714 60.398 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 12441000 1313800 1182400 2696700 1075500 1320400 4852700 7480 779 7584 33418;33419;33420;33421;33422;33423 22057;22058 22058 2 SVSIQEEQSAPSSEK NGIPDSSKSVSIQEEQ QSAPSSEKGGMNGYHV K S V E K G 1 0 0 0 0 2 3 0 0 1 0 1 0 0 1 5 0 0 0 1 0 15 0 1604.753 Q86XZ4;H7BYM7;F8VS10 Q86XZ4 112 126 SPATS2 Spermatogenesis-associated serine-rich protein 2 yes no 2 2.8367E-05 89.136 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 11932000 1522600 2235800 2065000 818920 1587400 3702000 7481 659 7585 33424;33425;33426;33427;33428;33429;33430 22059;22060;22061;22062;22063;22064 22062 6 SVSLTGAPESVQK DSGGLPERSVSLTGAP GAPESVQKAKMMLDDI R S V Q K A 1 0 0 0 0 1 1 1 0 0 1 1 0 0 1 3 1 0 0 2 0 13 0 1301.6827 Q92945-2;Q92945;E7EP96 Q92945-2 191 203 KHSRP Far upstream element-binding protein 2 yes no 2 2.1711E-15 109.15 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 217030000 0 42991000 24674000 13092000 38803000 97467000 7482 1366 7586 33431;33432;33433;33434;33435;33436 22065;22066;22067;22068;22069;22070 22069 6 SVSLTGAPESVQKAK DSGGLPERSVSLTGAP PESVQKAKMMLDDIVS R S V A K M 2 0 0 0 0 1 1 1 0 0 1 2 0 0 1 3 1 0 0 2 0 15 1 1500.8148 Q92945-2;Q92945;E7EP96 Q92945-2 191 205 KHSRP Far upstream element-binding protein 2 yes no 2;3 6.1845E-09 97.631 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 251560000 22812000 59198000 34400000 21117000 42187000 71851000 7483 1366 7587 33437;33438;33439;33440;33441;33442;33443;33444;33445;33446;33447;33448 22071;22072;22073;22074;22075;22076;22077;22078;22079;22080 22074 7 SVSMLSLNTPNSNRK ANTPELKKSVSMLSLN NTPNSNRKRRRLKETL K S V R K R 0 1 3 0 0 0 0 0 0 0 2 1 1 0 1 4 1 0 0 1 0 15 1 1646.841 Q9H8V3-2;Q9H8V3;G5E9L8;Q9H8V3-3;H7C3G1 Q9H8V3-2 333 347 ECT2 Protein ECT2 yes no 3 0.0060596 46.318 By matching By MS/MS By matching By matching By matching By matching 1 1 1351000 268720 1082200 0 0 0 0 7484 598 7588 33449;33450 22081 22081 1 SVSPCSNVESR RTTPRRSRSVSPCSNV PCSNVESRLLPRYSHS R S V S R L 0 1 1 0 1 0 1 0 0 0 0 0 0 0 1 4 0 0 0 2 0 11 0 1220.5455 Q9UQ35;F5GWZ7;Q9UQ35-2;I3L2L6;I3L182;Q9UQ39;I3L4D8 Q9UQ35 952 962 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.0054001 72.29 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3345500 783580 530430 0 0 0 2031500 7485 1623 7589 33451;33452;33453 22082 22082 1 SVSSPTSSNTPTPTK RGPSNPRKSVSSPTSS SNTPTPTKHLRTPSTK K S V T K H 0 0 1 0 0 0 0 0 0 0 0 1 0 0 3 5 4 0 0 1 0 15 0 1489.726 Q5M775-5;Q5M775-3;Q5M775-2;Q5M775-4;A8MV89;Q5M775 Q5M775-5 50 64 SPECC1 Cytospin-B yes no 2 0.00057715 82.529 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 6541500 753260 964400 1050100 986130 1210900 1576700 7486 48 7590 33454;33455;33456;33457;33458;33459 22083;22084;22085;22086 22086 3 SVTEEDLCHHMK ________________ EDLCHHMKVVVRVRPE M S V M K V 0 0 0 1 1 0 2 0 2 0 1 1 1 0 0 1 1 0 0 1 0 12 0 1484.6388 Q8NI77 Q8NI77 2 13 KIF18A Kinesin-like protein KIF18A yes yes 2;3 0.00055584 73.9 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 1 2 9229000 2636800 1162500 1681900 2016300 1731500 0 7487 1332 7591 33460;33461;33462;33463;33464;33465 22087;22088;22089 22087 3 SVTEQGAELSNEER DDMAACMKSVTEQGAE AELSNEERNLLSVAYK K S V E R N 1 1 1 0 0 1 4 1 0 0 1 0 0 0 0 2 1 0 0 1 0 14 0 1547.7063 E5RGE1;E5RIR4;E9PD24;E7EVZ2;E7ESK7;P63104;E7EX29 E5RGE1 28 41 YWHAZ 14-3-3 protein zeta/delta yes no 2 0.0025709 63.185 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 2136000 0 519230 0 0 1085100 531730 7488 338 7592 33466;33467;33468 22090;22091;22092 22092 3 SVTVPEAENPR VPLVSEDKSVTVPEAE VPEAENPRDSLVLPPT K S V P R D 1 1 1 0 0 0 2 0 0 0 0 0 0 0 2 1 1 0 0 2 0 11 0 1197.599 B4DLG2;O75152 B4DLG2 659 669 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 0.0024929 87.184 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 2493800 0 967590 0 0 709610 816650 7489 97 7593 33469;33470;33471 22093;22094;22095 22093 3 SVVANFIVK DQFASPMKSVVANFIV VVANFIVKDLLMNDRS K S V V K D 1 0 1 0 0 0 0 0 0 1 0 1 0 1 0 1 0 0 0 3 0 9 0 975.57532 Q29RF7;H0Y9L6 Q29RF7 797 805 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes no 2 0.015329 76.064 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 76801000 0 25032000 0 19744000 0 32026000 7490 1159 7594 33472;33473;33474 22096;22097;22098 22097 3 SVVAPPGAPK EEEIPKPKSVVAPPGA VAPPGAPKKEHVNVVF K S V P K K 2 0 0 0 0 0 0 1 0 0 0 1 0 0 3 1 0 0 0 2 0 10 0 921.52837 H3BR35;P15170;P15170-2;H3BSV8 H3BR35 68 77 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes no 2 0.033269 56.013 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 40715000 0 6160900 8281000 5252000 7466000 13556000 7491 642 7595 33475;33476;33477;33478;33479 22099 22099 1 SVVTVAVKGNK GKSASSVKSVVTVAVK TVAVKGNKASIKTAKS K S V N K A 1 0 1 0 0 0 0 1 0 0 0 2 0 0 0 1 1 0 0 4 0 11 1 1100.6554 Q14966-3;Q14966;Q14966-4 Q14966-3 818 828 ZNF638 Zinc finger protein 638 yes no 2 0.0070997 86.014 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 10779000 1194600 2214300 1709000 945740 2126700 2588500 7492 1118 7596 33480;33481;33482;33483;33484;33485 22100;22101;22102 22100 3 SVYFKPSLTPSGEFRK PVSIATNRSVYFKPSL TPSGEFRKTNQRIDNK R S V R K T 0 1 0 0 0 0 1 1 0 0 1 2 0 2 2 3 1 0 1 1 0 16 2 1841.9676 P49790;F6QR24;Q4LE47 P49790 380 395 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 3;4 1.1766E-37 118.2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 2 2 115450000 22357000 15031000 12843000 8225800 14031000 42961000 7493 531 7597 33486;33487;33488;33489;33490;33491;33492;33493;33494;33495;33496;33497;33498 22103;22104;22105;22106;22107;22108;22109;22110;22111;22112 22108 10 SVYHLEDIVR DIDPVVARSVYHLEDI YHLEDIVRQKKRLEQD R S V V R Q 0 1 0 1 0 0 1 0 1 1 1 0 0 0 0 1 0 0 1 2 0 10 0 1229.6404 Q14CA3;Q14669;Q14CF1;H7C2Y1 Q14CA3 1796 1805 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 3 0.0071008 82.029 By matching By matching By matching By matching By matching By MS/MS 1 6636900 0 0 0 0 0 6636900 7494 1122 7598 33499 22113 22113 1 SVYLGTGCGK IVCELRCKSVYLGTGC YLGTGCGKSKENAKAV K S V G K S 0 0 0 0 1 0 0 3 0 0 1 1 0 0 0 1 1 0 1 1 0 10 0 1040.4961 Q9NXV6 Q9NXV6 509 518 CDKN2AIP CDKN2A-interacting protein yes yes 2 0.017612 65.627 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4817000 0 1587300 0 1022900 0 2206800 7495 1560 7599 33500;33501;33502 22114 22114 1 SWADVVK EANLIVAKSWADVVKL KSWADVVKLGAKQTQT K S W V K L 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 2 0 7 0 803.41775 P46013;F5H4V4;P46013-2;E7EN66 P46013 660 666 MKI67 Antigen KI-67 no no 1 0.039404 46.426 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 12479000 1336600 1279200 1776400 1532300 1097300 5456800 7496 919;920 7600 33503;33504;33505;33506;33507;33508 22115 22115 1 SWEEQMIEVGRK TRYHNEMKSWEEQMIE QMIEVGRKDLLRRTIK K S W R K D 0 1 0 0 0 1 3 1 0 1 0 1 1 0 0 1 0 1 0 1 0 12 1 1490.7188 Q00059;A8MRB2 Q00059 217 228 TFAM Transcription factor A, mitochondrial yes no 2;3 1.8062E-12 110.64 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 2 1 84817000 26689000 8924900 20598000 17000000 0 11606000 7497 1019 7601 33509;33510;33511;33512;33513;33514 22116;22117;22118;22119;22120;22121 22121 5 SWHPEEFNCAHCK PFLVALGKSWHPEEFN EFNCAHCKNTMAYIGF K S W C K N 1 0 1 0 2 0 2 0 2 0 0 1 0 1 1 1 0 1 0 0 0 13 0 1700.6824 H0Y8Y3;F5H7Y0;E9PBF5;Q96HC4-4;Q96HC4;D6RB78 H0Y8Y3 181 193 PDLIM5 PDZ and LIM domain protein 5 yes no 3 0.021571 46.063 By matching By matching By matching By MS/MS By matching By matching 1 1 1 2372400 0 672400 1003900 696140 0 0 7498 405 7602 33515;33516;33517 22122 22122 1 SWPQESNLNRK KCIQTLKKSWPQESNL QESNLNRKRKKEQPKS K S W R K R 0 1 2 0 0 1 1 0 0 0 1 1 0 0 1 2 0 1 0 0 0 11 1 1357.6739 P42695;E9PKK4;G3V1A9 P42695 150 160 NCAPD3 Condensin-2 complex subunit D3 yes no 3 0.0026268 73.841 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 7950600 436810 1800300 1224900 1112000 880640 2496000 7499 917 7603 33518;33519;33520;33521;33522;33523 22123;22124;22125 22123 3 SWVGFSGGQHHTVCMDSEGK TSFKNSTKSWVGFSGG VCMDSEGKAYSLGRAE K S W G K A 0 0 0 1 1 1 1 4 2 0 0 1 1 1 0 3 1 1 0 2 0 20 0 2204.9368 C9JW69;P18754;P18754-2 C9JW69 312 331 RCC1 Regulator of chromosome condensation yes no 3;4 9.7242E-27 101.53 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 45639000 4566600 4599400 7315300 6870300 12165000 10122000 7500 271 7604 33524;33525;33526;33527;33528;33529;33530;33531;33532;33533;33534;33535 22126;22127;22128;22129;22130;22131;22132;22133 22132 8 SYAASASAAPAEPR FGSGERARSYAASASA SAAPAEPRYSQPATST R S Y P R Y 6 1 0 0 0 0 1 0 0 0 0 0 0 0 2 3 0 0 1 0 0 14 0 1347.6419 P20719 P20719 72 85 HOXA5 Homeobox protein Hox-A5 yes yes 2 0.0014962 68.972 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 3395700 0 1067000 0 0 0 2328700 7501 857 7605 33536;33537;33538 22134;22135;22136 22136 3 SYAPYHHHQPAAPK QYSAGMGRSYAPYHHH HHQPAAPKDLVKPPYS R S Y P K D 3 0 0 0 0 1 0 0 3 0 0 1 0 0 3 1 0 0 2 0 0 14 0 1602.7692 Q99958 Q99958 55 68 FOXC2 Forkhead box protein C2 yes yes 4 0.035916 38.3 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2216100 0 0 653040 0 417710 1145300 7502 1434 7606 33539;33540;33541 22137 22137 1 SYCAEIAHNVSSK EVLLMCNKSYCAEIAH IAHNVSSKNRKAIVER K S Y S K N 2 0 1 0 1 0 1 0 1 1 0 1 0 0 0 3 0 0 1 1 0 13 0 1464.6667 D3YTB1;P62910;F8W727 D3YTB1 94 106 RPL32 60S ribosomal protein L32 yes no 2;3 0.012066 51.939 By matching By matching By matching By matching By MS/MS By MS/MS 2 2 3 2 11148000 1243600 1128200 0 0 4858800 3917800 7503 312 7607 33542;33543;33544;33545;33546;33547;33548;33549;33550 22138;22139;22140 22140 2 SYDDAESLKTLR IVGLQYKKSYDDAESL AESLKTLRYGKIMIMT K S Y L R Y 1 1 0 2 0 0 1 0 0 0 2 1 0 0 0 2 1 0 1 0 0 12 1 1396.6834 Q02880-2;Q02880;E9PCY5 Q02880-2 537 548 TOP2B DNA topoisomerase 2-beta;DNA topoisomerase 2 yes no 3 0.0088439 60.301 By matching By matching By matching By matching By matching By MS/MS 1 2247500 0 0 0 0 0 2247500 7504 1035 7608 33551 22141 22141 1 SYDTDQGRVFVK GGCISQGRSYDTDQGR DQGRVFVKVNPKAEAR R S Y V K V 0 1 0 2 0 1 0 1 0 0 0 1 0 1 0 1 1 0 1 2 0 12 1 1413.6888 Q9HA64;I3L1I7;I3L139;I3L407;I3L3W5 Q9HA64 30 41 FN3KRP Ketosamine-3-kinase yes no 2;3 0.013828 62.088 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 2 1 2 15212000 380860 6007600 2560300 1031500 0 5232000 7505 1511 7609 33552;33553;33554;33555;33556;33557;33558;33559 22142;22143;22144 22142 3 SYDYHQNWGR ________________ DYHQNWGRDGGPRSSG M S Y G R D 0 1 1 1 0 1 0 1 1 0 0 0 0 0 0 1 0 1 2 0 0 10 0 1324.5585 Q9H2U1-3;Q9H2U1-2;F5GZS0;Q9H2U1 Q9H2U1-3 2 11 DHX36 Probable ATP-dependent RNA helicase DHX36 yes no 2 0.004994 75.566 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5044600 0 774330 645190 0 965470 2659600 7506 502 7610 33560;33561;33562;33563 22145 22145 1 SYENELDPLKNR TSSKEIVKSYENELDP ELDPLKNRLKEIEHNL K S Y N R L 0 1 2 1 0 0 2 0 0 0 2 1 0 0 1 1 0 0 1 0 0 12 1 1476.7209 Q92878-2;Q92878;Q92878-3;E7EN38;E7ESD9 Q92878-2 249 260 RAD50 DNA repair protein RAD50 yes no 3 0.00023844 87.713 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 7507 1362 7611 33564 22146 22146 1 SYGGYEVVGGSSDSYLVPGMTYSKGK PPITSVDKSYGGYEVV GMTYSKGKIYPVGYFT K S Y G K I 0 0 0 1 0 0 1 6 0 0 1 2 1 0 1 5 1 0 4 3 0 26 1 2687.2425 Q2L6G8;Q15517;G8JLG2 Q2L6G8 292 317 CDSN Corneodesmosin yes no 3 1.6959E-20 88.239 By matching By matching By matching By MS/MS By matching By matching 1 25784000 0 0 0 25784000 0 0 7508 601 7612 33565 22147 22147 64 1 SYGNFYKVPR KKWINIRKSYGNFYKV GNFYKVPRSQTKLTIM K S Y P R S 0 1 1 0 0 0 0 1 0 0 0 1 0 1 1 1 0 0 2 1 0 10 1 1229.6193 Q8IV48 Q8IV48 263 272 ERI1 3-5 exoribonuclease 1 yes yes 3 0.016878 66.568 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 15315000 1818100 2658000 0 1255100 3556900 6027400 7509 1276 7613 33566;33567;33568;33569;33570 22148;22149;22150 22148 3 SYGRPPPDVEGMTSLK ________________ VEGMTSLKVDNLTYRT M S Y L K V 0 1 0 1 0 0 1 2 0 0 1 1 1 0 3 2 1 0 1 1 0 16 1 1732.8454 Q8NAK9;Q01130;F5GYB8;H0YG49 Q8NAK9 2 17 SRSF2;SFRS2 Serine/arginine-rich splicing factor 2 yes no 2 1.031E-97 140.46 By matching By matching By matching By MS/MS By matching By matching 1 4534300 0 0 0 4534300 0 0 7510 1026 7614 33571 22151 22151 1 SYIQGGRPFTK PQKVGAYRSYIQGGRP QGGRPFTKKFRSAGHG R S Y T K K 0 1 0 0 0 1 0 2 0 1 0 1 0 1 1 1 1 0 1 0 0 11 1 1252.6564 B7ZM82;B3KVH1;O95785;O95785-2 B7ZM82 768 778 WIZ Protein Wiz yes no 2;3 0.0052125 73.666 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 2 2 2 23287000 1140200 2567800 2128200 2487400 7639900 7323800 7511 212 7615 33572;33573;33574;33575;33576;33577;33578;33579;33580;33581;33582 22152;22153;22154;22155;22156 22156 5 SYISEETR EKDFCNDKSYISEETR SYISEETRVLLLTGKP K S Y T R V 0 1 0 0 0 0 2 0 0 1 0 0 0 0 0 2 1 0 1 0 0 8 0 983.45599 Q29RF7 Q29RF7 1120 1127 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 0.012377 90.601 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5909400 0 1767800 0 552690 0 3588800 7512 1159 7616 33583;33584;33585 22157 22157 1 SYLSGGAGAAGGGGADPGNK GGKKSGKKSYLSGGAG GGADPGNKKWEQKQVQ K S Y N K K 4 0 1 1 0 0 0 8 0 0 1 1 0 0 1 2 0 0 1 0 0 20 0 1662.7598 H0YJU4;H0YJV7;P25490 H0YJU4 15 34 YY1 Transcriptional repressor protein YY1 yes no 2 0.00016186 74.776 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 5611400 747200 871350 638550 1068700 1143300 1142300 7513 624 7617 33586;33587;33588;33589;33590;33591 22158;22159 22159 2 SYNCCSGNFSSR ________________ CSGNFSSRSCGDYLRY M S Y S R S 0 1 2 0 2 0 0 1 0 0 0 0 0 1 0 4 0 0 1 0 0 12 0 1437.5401 Q52LG2 Q52LG2 2 13 KRTAP13-2 Keratin-associated protein 13-2 no no 2 0.0036601 62.162 By matching By matching By matching By MS/MS By matching By matching 1 4703200 0 0 0 4703200 0 0 7514 1173 7618 33592 22160 22160 1 SYQCLKETCEK FTKLDADKSYQCLKET CLKETCEKLGYQWKKS K S Y E K L 0 0 0 0 2 1 2 0 0 0 1 2 0 0 0 1 1 0 1 0 0 11 1 1444.6327 O14757-2;F5H7S4;O14757;E7EPP6 O14757-2 295 305 CHEK1 Serine/threonine-protein kinase Chk1 yes no 2 0.0030105 92.792 By matching By matching By MS/MS By matching By matching By matching 1 1 1 2362500 0 496070 981290 0 0 885160 7515 358 7619 33593;33594;33595 22161 22161 1 SYRHGDLPDIQIK DAQVVLYRSYRHGDLP DLPDIQIKHSSLITPL R S Y I K H 0 1 0 2 0 1 0 1 1 2 1 1 0 0 1 1 0 0 1 0 0 13 1 1540.7998 P78527;E7EUY0;P78527-2 P78527 2774 2786 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 0.0013983 78.964 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 28266000 2659800 2810800 0 279380 6660300 15856000 7516 1012 7620 33596;33597;33598;33599;33600 22162;22163;22164;22165 22163 4 SYRSVGGSGGGSFGDNLVTR ASSVTVTRSYRSVGGS FGDNLVTRSYLLGNSS R S Y T R S 0 2 1 1 0 0 0 6 0 0 1 0 0 1 0 4 1 0 1 2 0 20 1 1971.9399 P02545;P02545-3;D6RAQ3;E7EUI9 P02545 625 644 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.00012383 68.406 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 55820000 9510300 9787600 7951400 4997200 8117800 15456000 7517 783 7621 33601;33602;33603;33604;33605;33606 22166;22167;22168;22169;22170;22171;22172 22167 7 SYSDPPLK KSSQEEVRSYSDPPLK SYSDPPLKFMSVQRPG R S Y L K F 0 0 0 1 0 0 0 0 0 0 1 1 0 0 2 2 0 0 1 0 0 8 0 905.44945 P52597;B4DKS8 P52597 193 200 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 2 0.02554 75.043 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 18908000 0 0 10818000 0 8090400 0 7518 958 7622 33607;33608 22173;22174 22173 2 SYSEDDIHRSIK SGRVFIIKSYSEDDIH DDIHRSIKYSIWCSTE K S Y I K Y 0 1 0 2 0 0 1 0 1 2 0 1 0 0 0 3 0 0 1 0 0 12 1 1448.6896 F8W840;Q9BYJ9;Q9Y5A9-2;F5H8I7;Q9Y5A9;Q7Z739 F8W840 346 357 YTHDF1;YTHDF2;YTHDF3 YTH domain family protein 1;YTH domain family protein 2;YTH domain family protein 3 yes no 3 0.011541 57.885 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 7585300 0 1206100 1505300 888540 1556100 2429200 7519 559 7623 33609;33610;33611;33612;33613 22175;22176 22175 2 SYSFIAR YENYRRNKSYSFIARM KSYSFIARMKARDECK K S Y A R M 1 1 0 0 0 0 0 0 0 1 0 0 0 1 0 2 0 0 1 0 0 7 0 842.42865 Q8IWX8 Q8IWX8 902 908 CHERP Calcium homeostasis endoplasmic reticulum protein yes yes 2 0.0064305 92.467 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 23575000 1931200 2510400 3637800 2681500 3571200 9243100 7520 1281 7624 33614;33615;33616;33617;33618;33619 22177;22178 22178 2 SYSQSSNLFR YECVQCGKSYSQSSNL SQSSNLFRHQRRHNAE K S Y F R H 0 1 1 0 0 1 0 0 0 0 1 0 0 1 0 4 0 0 1 0 0 10 0 1187.5571 P17028 P17028 343 352 ZNF24 Zinc finger protein 24 yes yes 2 0.011635 70.942 By matching By matching By matching By matching By matching By MS/MS 1 1 1 11655000 0 527880 0 0 4551800 6575300 7521 844 7625 33620;33621;33622 22179 22179 1 SYVAWDREK TSSDEMMKSYVAWDRE YVAWDREKRLSFAVPF K S Y E K R 1 1 0 1 0 0 1 0 0 0 0 1 0 0 0 1 0 1 1 1 0 9 1 1152.5564 P78527;E7EUY0;P78527-2 P78527 882 890 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 4.8407E-54 143.37 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 71154000 6597500 4445900 7384800 9242300 13119000 30364000 7522 1012 7626 33623;33624;33625;33626;33627;33628;33629 22180;22181;22182;22183;22184;22185 22182 6 TAAALAPASLTSAR PVNIAGSRTAAALAPA PASLTSARMAPALSGA R T A A R M 6 1 0 0 0 0 0 0 0 0 2 0 0 0 1 2 2 0 0 0 0 14 0 1299.7147 Q9UQ35;F5GWZ7 Q9UQ35 2357 2370 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.0011055 78.401 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 56237000 6884300 10619000 9456900 2627300 1151300 25498000 7523 1623 7627 33630;33631;33632;33633;33634;33635 22186;22187;22188;22189 22188 4 TAAAQVGTSVSSATNTSTRPIITVHK NPATRMLKTAAAQVGT RPIITVHKSGTVTVAQ K T A H K S 4 1 1 0 0 1 0 1 1 2 0 1 0 0 1 4 6 0 0 3 0 26 1 2597.3773 A6NEM2;P51610-2;P51610 A6NEM2 612 637 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 3 0.00214 45.679 By MS/MS By matching By matching By matching By matching By matching 1 830770 830770 0 0 0 0 0 7524 18 7628 33636 22190;22191 22191 2 TAAEDAIRNLHHYK GFVHIEDKTAAEDAIR IRNLHHYKLHGVNINV K T A Y K L 3 1 1 1 0 0 1 0 2 1 1 1 0 0 0 0 1 0 1 0 0 14 1 1637.8274 Q9BWF3;E9PB51;Q9BQ04;E7EQS3;Q9BWF3-3;D6R9K7;Q9BWF3-2;E9PLB0;E9PM61 Q9BWF3 46 59 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 3;4 0.0029293 62.088 By matching By matching By MS/MS By matching By matching By MS/MS 2 2 2 2 2 2 50736000 3960200 10667000 13015000 5744400 8038200 9310600 7525 1457 7629 33637;33638;33639;33640;33641;33642;33643;33644;33645;33646;33647;33648 22192;22193 22193 2 TAAELLQSQGSQAGGSQTLK VNAFKQRKTAAELLQS AGGSQTLKRDKEKKK_ K T A L K R 3 0 0 0 0 4 1 3 0 0 3 1 0 0 0 3 2 0 0 0 0 20 0 1974.0018 B4E049;Q14141-2;Q14141-4;B1AMS2;Q14141;F5H1J5 B4E049 343 362 SEPT6 Septin-6 yes no 2 4.4009E-23 97.384 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 2 2 15722000 2088600 1913800 2340000 1253700 2185900 5939900 7526 65 7630 33649;33650;33651;33652;33653;33654;33655;33656;33657 22194;22195;22196;22197;22198;22199;22200;22201 22197 8 TAAFLLPILSQIYSDGPGEALR CAQTGSGKTAAFLLPI DGPGEALRAMKENGRY K T A L R A 3 1 0 1 0 1 1 2 0 2 4 0 0 1 2 2 1 0 1 0 0 22 0 2331.2474 O00571;O00571-2;B4DLU5 O00571 231 252 DDX3X ATP-dependent RNA helicase DDX3X yes no 2 1.2094E-33 105.06 By matching By MS/MS By matching By matching By matching By matching 1 18422000 0 18422000 0 0 0 0 7527 693 7631 33658 22202 22202 1 TAANKSPCETISSPSSTLESK TLNSCVSKTAANKSPC PSSTLESKDSGIIATI K T A S K D 2 0 1 0 1 0 2 0 0 1 1 2 0 0 2 6 3 0 0 0 0 21 1 2194.0423 Q9C0D5 Q9C0D5 202 222 TANC1 Protein TANC1 yes yes 3 0.0067175 43.476 By MS/MS By matching By matching By matching By matching By matching 1 1 3106300 2144100 0 0 0 962290 0 7528 1473 7632 33659;33660 22203 22203 1 TAANLVVETGQDGVQIR WWNELFNKTAANLVVE GQDGVQIRSLSKETTR K T A I R S 2 1 1 1 0 2 1 2 0 1 1 0 0 0 0 0 2 0 0 3 0 17 0 1769.9272 Q5T3I0;Q5T3I0-3;E9PAV9;E9PPY4;F2Z3C6;Q5T3I0-2 Q5T3I0 72 88 GPATCH4 G patch domain-containing protein 4 yes no 2 2.5063E-239 170.48 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 40870000 24727000 12800000 0 3342200 0 0 7529 1191 7633 33661;33662;33663 22204;22205;22206 22205 3 TAAPSPSLLYK YNAVKPEKTAAPSPSL PSPSLLYKSTKEDRRS K T A Y K S 2 0 0 0 0 0 0 0 0 0 2 1 0 0 2 2 1 0 1 0 0 11 0 1146.6285 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 519 529 DIDO1 Death-inducer obliterator 1 yes no 2 0.00096701 93.561 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 66084000 18475000 0 16629000 0 21608000 9372300 7530 1447 7634 33664;33665;33666;33667 22207;22208;22209 22209 3 TAEADTSSELAK MKASKKPKTAEADTSS DTSSELAKKSKEVFRK K T A A K K 3 0 0 1 0 0 2 0 0 0 1 1 0 0 0 2 2 0 0 0 0 12 0 1221.5725 Q9BYW2;F2Z317 Q9BYW2 2457 2468 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 2 0.0052749 64.121 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 4041300 464020 765220 1102800 247610 398220 1063400 7531 479 7635 33668;33669;33670;33671;33672;33673 22210 22210 1 TAEAGGVTGKGQDGIGSK DDQQKVKKTAEAGGVT GQDGIGSKAEKTLGDF K T A S K A 2 0 0 1 0 1 1 6 0 1 0 2 0 0 0 1 2 0 0 1 0 18 1 1631.8115 P09874;F8WC10 P09874 88 105 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2;3 2.3536E-58 119.96 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 2 4 3 4 2 129850000 31913000 18177000 17103000 21189000 36154000 5317800 7532 815 7636 33674;33675;33676;33677;33678;33679;33680;33681;33682;33683;33684;33685;33686;33687;33688;33689;33690;33691;33692;33693 22211;22212;22213;22214;22215;22216;22217;22218;22219;22220;22221 22216 11 TAEAGGVTGKGQDGIGSKAEK DDQQKVKKTAEAGGVT GIGSKAEKTLGDFAAE K T A E K T 3 0 0 1 0 1 2 6 0 1 0 3 0 0 0 1 2 0 0 1 0 21 2 1959.9861 P09874;F8WC10 P09874 88 108 PARP1 Poly [ADP-ribose] polymerase 1 yes no 3;4 2.2258E-14 91.547 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 2 2 145950000 18828000 16857000 28974000 40275000 22001000 19019000 7533 815 7637 33694;33695;33696;33697;33698;33699;33700;33701;33702;33703;33704;33705;33706;33707 22222;22223;22224;22225;22226;22227;22228;22229;22230;22231;22232;22233;22234 22222 11 TAEEEELAEEKK QEEVNEKKTAEEEELA EELAEEKKKALNVVQS K T A K K K 2 0 0 0 0 0 6 0 0 0 1 2 0 0 0 0 1 0 0 0 0 12 1 1404.662 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;Q76FK4-3 F5H101 902 913 NOL8 Nucleolar protein 8 yes no 2;3 0.0020085 75.739 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 2 1 1 1 2 6774900 421110 1848800 914840 319070 945490 2325600 7534 27 7638 33708;33709;33710;33711;33712;33713;33714;33715 22235;22236;22237;22238 22238 4 TAEEPPQEKAPEPTDARK NVEDVHARTAEEPPQE PEPTDARKKGEKRKAE R T A R K K 3 1 0 1 0 1 4 0 0 0 0 2 0 0 4 0 2 0 0 0 0 18 2 1992.9752 O43719;E9PFP2;Q5H919;Q5H918 O43719 96 113 HTATSF1 HIV Tat-specific factor 1 yes no 4 0.00027185 71.263 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 1 1 2 1 40581000 4337200 3160700 451030 1793900 16447000 14391000 7535 720 7639 33716;33717;33718;33719;33720;33721;33722;33723 22239;22240;22241;22242;22243;22244;22245 22241 7 TAEFQVAR AVHISNPKTAEFQVAR TAEFQVARTTLLPGLL K T A A R T 2 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 1 0 8 0 920.47158 Q9NSD9;F5H6Y1 Q9NSD9 444 451 FARSB Phenylalanine--tRNA ligase beta subunit yes no 2 6.2338E-09 119.29 By matching By matching By matching By matching By matching By MS/MS 1 1 4526000 1371400 0 0 0 0 3154600 7536 1543 7640 33724;33725 22246 22246 1 TAELSGSSSTLEPIISSSAHHVTTVNSTNCK TFSVPVAKTAELSGSS TVNSTNCKKTPPEDCE K T A C K K 2 0 2 0 1 0 2 1 2 2 2 1 0 0 1 8 5 0 0 2 0 31 0 3214.5412 P49790;F6QR24 P49790 556 586 NUP153 Nuclear pore complex protein Nup153 yes no 4 6.1756E-126 119.37 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 215620000 40016000 53174000 30811000 58012000 5406100 28197000 7537 531 7641 33726;33727;33728;33729;33730;33731 22247;22248;22249;22250;22251;22252;22253;22254 22248 8 TAENFRALCTGEK LFSNIVPRTAENFRAL RALCTGEKGFGFKNSI R T A E K G 2 1 1 0 1 0 2 1 0 0 1 1 0 1 0 0 2 0 0 0 0 13 1 1495.7089 P49792;E9PGT0;Q2YDB7;H0Y548;P30405;Q08752 P49792 3092 3104 RANBP2;PPIF;PPID E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase F, mitochondrial;Peptidyl-prolyl cis-trans isomerase D yes no 3 5.6392E-05 95.094 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 15753000 1147900 3513500 1529400 1720300 2132600 5708900 7538 945 7642 33732;33733;33734;33735;33736;33737 22255;22256;22257;22258 22257 4 TAENFRALSTGEK LFADKVPKTAENFRAL RALSTGEKGFGYKGSC K T A E K G 2 1 1 0 0 0 2 1 0 0 1 1 0 1 0 1 2 0 0 0 0 13 1 1422.7103 P62937;B4DM82;F8WE65;C9J5S7;Q9Y536;F5H284;A2BFH1 P62937 32 44 PPIA;PPIAL4A;PPIAL4D;PPIAL4G Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase A-like 4D;Peptidyl-prolyl cis-trans isomerase A-like 4G yes no 2;3 2.4626E-109 149.3 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 2 2 230070000 14001000 45481000 40863000 11458000 36361000 81911000 7539 999 7643 33738;33739;33740;33741;33742;33743;33744;33745;33746;33747;33748;33749 22259;22260;22261;22262;22263;22264;22265;22266;22267;22268 22266 10 TAESSGGPSTSRVTDPQGK TSKSAISKTAESSGGP RVTDPQGKSDIPMDLF K T A G K S 1 1 0 1 0 1 1 3 0 0 0 1 0 0 2 4 3 0 0 1 0 19 1 1860.8813 P19447;G3V1S1;H7C309 P19447 223 241 ERCC3 TFIIH basal transcription factor complex helicase XPB subunit yes no 3 0.00057914 64.565 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 5149700 0 998600 1018500 481140 986960 1664400 7540 856 7644 33750;33751;33752;33753;33754 22269;22270;22271 22270 3 TAGPEQGPGLGGR RKARRLQRTAGPEQGP QGPGLGGRSGAEEASG R T A G R S 1 1 0 0 0 1 1 5 0 0 1 0 0 0 2 0 1 0 0 0 0 13 0 1195.5945 Q5C9Z4 Q5C9Z4 101 113 NOM1 Nucleolar MIF4G domain-containing protein 1 yes yes 2 0.0051068 61.167 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 4181600 0 539020 630850 326640 861790 1823300 7541 1178 7645 33755;33756;33757;33758;33759 22272;22273 22272 2 TAGPIASAQKQPAGK PESNAVTKTAGPIASA AQKQPAGKVQIVSKKV K T A G K V 4 0 0 0 0 2 0 2 0 1 0 2 0 0 2 1 1 0 0 0 0 15 1 1423.7783 E7EVA0;P27816-6;P27816;P27816-2;P27816-4;E9PGM5;B5MEG9 E7EVA0 2122 2136 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 3.6252E-21 111.72 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 4 2 2 2 2 2 68362000 9436500 8093100 11582000 10253000 17134000 11864000 7542 388 7646 33760;33761;33762;33763;33764;33765;33766;33767;33768;33769;33770;33771;33772;33773 22274;22275;22276;22277;22278;22279;22280;22281 22281 8 TAGSVRGGDEVYLLCDKVQK LKISRMDKTAGSVRGG LLCDKVQKDDIEVRFY K T A Q K D 1 1 0 2 1 1 1 3 0 0 2 2 0 0 0 1 1 0 1 3 0 20 2 2194.1052 Q00653-3;Q00653-4;Q00653 Q00653-3 236 255 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit yes no 3;4 1.7757E-17 99.092 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 2 2 2 2 106370000 49302000 8783800 31910000 12491000 3886100 0 7543 1021 7647 33774;33775;33776;33777;33778;33779;33780;33781;33782;33783 22282;22283;22284;22285;22286;22287;22288;22289;22290;22291 22290 10 TAGTICLETFK QVCIARLRTAGTICLE TICLETFKDFPQMGRF R T A F K D 1 0 0 0 1 0 1 1 0 1 1 1 0 1 0 0 3 0 0 0 0 11 0 1239.6169 H3BR35;P15170;P15170-2;F5GWG9;Q8IYD1 H3BR35 435 445 GSPT1;GSPT2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 2 0.0053081 72.731 By MS/MS By matching By matching By matching By matching By matching 1 9629400 9629400 0 0 0 0 0 7544 642 7648 33784 22292 22292 1 TAHNSEADLEESFNEHELEPSSPKSK VYCRKHKKTAHNSEAD EPSSPKSKKKSRKGRP K T A S K K 2 0 2 1 0 0 6 0 2 0 2 2 0 1 2 5 1 0 0 0 0 26 1 2911.3108 B4E0G4;Q8IWS0 B4E0G4 100 125 PHF6 PHD finger protein 6 yes no 4 0.031233 29.645 By MS/MS By matching By matching By matching By matching By matching 1 2474500 2474500 0 0 0 0 0 7545 152 7649 33785 22293 22293 1 TAIHTAAMDMLGGPGIESQCRK AVNALWPKTAIHTAAM GIESQCRKVDIIADAA K T A R K V 3 1 0 1 1 1 1 3 1 2 1 1 2 0 1 1 2 0 0 0 0 22 1 2343.1134 Q6YN16-2;Q6YN16;B4E136 Q6YN16-2 126 147 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 yes no 3 0.00048652 56.748 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 7546 1239 7650 33786 22294 22294 1 TAILVGGMSTQK VARFTGIKTAILVGGM VGGMSTQKQQRMLNRR K T A Q K Q 1 0 0 0 0 1 0 2 0 1 1 1 1 0 0 1 2 0 0 1 0 12 0 1204.6486 G3V529;Q9GZR7;F5H4J5;Q4V9L5;F5GYL3;F5H4V3 G3V529 375 386 DDX24 ATP-dependent RNA helicase DDX24 yes no 2 0.0045421 64.945 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 17249000 2671400 1513400 1516500 1206100 964990 9377000 7547 588 7651 33787;33788;33789;33790;33791;33792;33793 22295;22296;22297;22298;22299 22297 5 TAITVEHLAIK LIGKKTQKTAITVEHL TVEHLAIKCHWTQRAA K T A I K C 2 0 0 0 0 0 1 0 1 2 1 1 0 0 0 0 2 0 0 1 0 11 0 1194.6972 Q9NR30;Q9NR30-2 Q9NR30 407 417 DDX21 Nucleolar RNA helicase 2 yes no 2 8.629E-30 127.83 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 15755000 5594900 1629200 5248200 1315600 1646200 321270 7548 1534 7652 33794;33795;33796;33797;33798;33799;33800 22300;22301;22302;22303;22304 22304 5 TALINSTGEEVAMR WGCGNSLRTALINSTG TGEEVAMRKLVRSVTV R T A M R K 2 1 1 0 0 0 2 1 0 1 1 0 1 0 0 1 2 0 0 1 0 14 0 1490.7399 P02545;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCI8 P02545 528 541 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.0054239 55.98 By matching By MS/MS By matching By matching By matching By matching 1 1 1 3267600 0 1716600 0 402530 0 1148500 7549 783 7653 33801;33802;33803 22305 22305 1 TALINSTGEEVAMRK WGCGNSLRTALINSTG GEEVAMRKLVRSVTVV R T A R K L 2 1 1 0 0 0 2 1 0 1 1 1 1 0 0 1 2 0 0 1 0 15 1 1618.8349 P02545;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCI8 P02545 528 542 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.0002811 72.815 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 8498900 997480 3129600 1510300 0 418020 2443500 7550 783 7654 33804;33805;33806;33807;33808 22306;22307;22308;22309;22310 22309 4 TALSEEEEEER RYRSRNSRTALSEEEE SEEEEEEREFRKQFPL R T A E R E 1 1 0 0 0 0 6 0 0 0 1 0 0 0 0 1 1 0 0 0 0 11 0 1320.5681 Q9NU22 Q9NU22 3562 3572 MDN1 Midasin yes yes 2 0.0084531 67.08 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 2487900 0 486090 223170 0 527110 1251500 7551 1544 7655 33809;33810;33811;33812 22311;22312 22311 2 TALVERDDFSSGTSSR DAVTRGLKTALVERDD FSSGTSSRSTKLIHGG K T A S R S 1 2 0 2 0 0 1 1 0 0 1 0 0 1 0 4 2 0 0 1 0 16 1 1726.8122 P43304;F5GYK7 P43304 95 110 GPD2 Glycerol-3-phosphate dehydrogenase, mitochondrial yes no 3 0.002745 67.136 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 8708100 431890 907930 0 811550 1873100 4683600 7552 918 7656 33813;33814;33815;33816;33817 22313;22314;22315 22315 3 TANLAEANASEEDK ISLAQLTKTANLAEAN ANASEEDKIKAMMSQS K T A D K I 4 0 2 1 0 0 3 0 0 0 1 1 0 0 0 1 1 0 0 0 0 14 0 1461.6583 Q7Z6E9;Q7Z6E9-2;Q7Z6E9-4;H3BUN0;I3L3Y2 Q7Z6E9 117 130 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 2 0.012528 49.066 By matching By MS/MS By matching By matching By matching By matching 1 360730 0 360730 0 0 0 0 7553 1255 7657 33818 22316 22316 1 TANLAEANASEEDKIK ISLAQLTKTANLAEAN ASEEDKIKAMMSQSGH K T A I K A 4 0 2 1 0 0 3 0 0 1 1 2 0 0 0 1 1 0 0 0 0 16 1 1702.8374 Q7Z6E9;Q7Z6E9-2;Q7Z6E9-4;H3BUN0;I3L3Y2 Q7Z6E9 117 132 RBBP6 E3 ubiquitin-protein ligase RBBP6 yes no 2;3 5.0254E-05 88.311 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 2 25747000 2106000 5039300 2288400 2172800 4721700 9419100 7554 1255 7658 33819;33820;33821;33822;33823;33824;33825;33826;33827;33828;33829 22317;22318;22319;22320;22321;22322;22323;22324;22325 22319 9 TANQLMNDFAEK ERQEGEAKTANQLMND LMNDFAEKETLKQKQI K T A E K E 2 0 2 1 0 1 1 0 0 0 1 1 1 1 0 0 1 0 0 0 0 12 0 1380.6344 Q92878-2;Q92878;Q92878-3;E7EN38;E7ESD9 Q92878-2 416 427 RAD50 DNA repair protein RAD50 yes no 2 0.012072 60.364 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 16309000 0 5972200 0 1768000 0 8568800 7555 1362 7659 33830;33831;33832 22326;22327;22328 22327 2 TANVPQTVPMRLR FNAVMNPKTANVPQTV QTVPMRLRKLPDSFFK K T A L R K 1 2 1 0 0 1 0 0 0 0 1 0 1 0 2 0 2 0 0 2 0 13 1 1481.8137 E9PRV2;P46937-3;P46937-2;F5H202;P46937 E9PRV2 77 89 YAP1 Yorkie homolog yes no 3 0.0045635 62.088 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 2 1 1 10407000 2133100 1088100 3324600 1531900 2329500 0 7556 469 7660 33833;33834;33835;33836;33837;33838 22329;22330 22330 2 TAPGMGDQSGCYR QLSTSRLRTAPGMGDQ GDQSGCYRCGKEGHWS R T A Y R C 1 1 0 1 1 1 0 3 0 0 0 0 1 0 1 1 1 0 1 0 0 13 0 1398.5656 Q9BWF3;E9PB51;Q9BQ04;B0LM41 Q9BWF3 152 164 RBM4;RBM4B;RBM14 RNA-binding protein 4;RNA-binding protein 4B;RNA-binding protein 14 yes no 2 0.0015783 74.78 By matching By matching By matching By matching By matching By MS/MS 1 1 4396900 0 0 0 0 497780 3899100 7557 1457 7661 33839;33840 22331 22331 1 TAPGMGDQSGCYRCGK QLSTSRLRTAPGMGDQ SGCYRCGKEGHWSKEC R T A G K E 1 1 0 1 2 1 0 4 0 0 0 1 1 0 1 1 1 0 1 0 0 16 1 1743.7127 Q9BWF3;Q9BQ04;B0LM41 Q9BWF3 152 167 RBM4;RBM4B;RBM14 RNA-binding protein 4;RNA-binding protein 4B;RNA-binding protein 14 yes no 3 0.0034736 53.3 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 7268100 0 0 2939900 994450 973970 2359800 7558 1457 7662 33841;33842;33843;33844 22332;22333 22332 2 TAPTLSPEHWK SGPPELRKTAPTLSPE TLSPEHWKAVPPVSPE K T A W K A 1 0 0 0 0 0 1 0 1 0 1 1 0 0 2 1 2 1 0 0 0 11 0 1265.6404 Q96JM3 Q96JM3 400 410 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2;3 0.0034768 78.342 By MS/MS By matching By matching By matching By MS/MS By matching 1 2 1 2 5239200 616030 1448200 571810 0 2603200 0 7559 1399 7663 33845;33846;33847;33848;33849;33850 22334;22335 22334 2 TAQEVETYRR EHPDLARRTAQEVETY QEVETYRRSKEITVRG R T A R R S 1 2 0 0 0 1 2 0 0 0 0 0 0 0 0 0 2 0 1 1 0 10 1 1251.6208 P17844 P17844 69 78 DDX5 Probable ATP-dependent RNA helicase DDX5 yes yes 3 3.1938E-09 114.97 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 46296000 3194900 9352800 16681000 2113700 3758300 11195000 7560 853 7664 33851;33852;33853;33854;33855;33856 22336;22337;22338;22339;22340;22341;22342 22337 7 TAQGLPGTSNSNSSR PPQHFSPRTAQGLPGT TSNSNSSRSGSQRQGS R T A S R S 1 1 2 0 0 1 0 2 0 0 1 0 0 0 1 4 2 0 0 0 0 15 0 1475.6964 Q9P275;Q9P275-2;E9PEW0 Q9P275 549 563 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.018348 43.316 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 16397000 1411500 1883400 1897700 894660 4478800 5831200 7561 1576 7665 33857;33858;33859;33860;33861;33862 22343 22343 1 TAQGLSPVDQRK LQHSKKGKTAQGLSPV LSPVDQRKCERLLLYL K T A R K C 1 1 0 1 0 2 0 1 0 0 1 1 0 0 1 1 1 0 0 1 0 12 1 1298.6943 E7EN20;H0Y612;Q9UPN9-2;Q9UPN9 E7EN20 586 597 TRIM33 E3 ubiquitin-protein ligase TRIM33 yes no 3 0.003387 72.29 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 3125000 567620 337380 876850 444350 0 898800 7562 348 7666 33863;33864;33865;33866;33867 22344;22345;22346;22347 22344 3 TASSREIRQAFK YSLLGVSKTASSREIR REIRQAFKKLALKLHP K T A F K K 2 2 0 0 0 1 1 0 0 1 0 1 0 1 0 2 1 0 0 0 0 12 2 1392.7474 Q8IXB1;Q8IXB1-2;F8W884;Q3B7W8;E7EP04;Q71S60 Q8IXB1 45 56 DNAJC10 DnaJ homolog subfamily C member 10 yes no 3 0.032658 58.592 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 97654000 0 20832000 36774000 0 21525000 18523000 7563 1287 7667 33868;33869;33870;33871 22348;22349 22349 2 TASTLLKPAPSGLPSERK KGQANESKTASTLLKP SGLPSERKRDAAAALS K T A R K R 2 1 0 0 0 0 1 1 0 0 3 2 0 0 3 3 2 0 0 0 0 18 2 1852.0418 Q8N201;A4D212 Q8N201 41 58 INTS1;DKFZP586J0619 Integrator complex subunit 1 yes no 3 0.00534 65.905 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 6325900 0 960690 1392700 1071700 0 2900900 7564 11 7668 33872;33873;33874;33875 22350;22351 22350 2 TATGPSTGGGTVISR VVMVQPSKTATGPSTG GGGTVISRTQSSLVEA K T A S R T 1 1 0 0 0 0 0 4 0 1 0 0 0 0 1 2 4 0 0 1 0 15 0 1360.6947 H0Y5I5;F8WCX2;Q8N1G0-2;Q8N1G0 H0Y5I5 81 95 ZNF687 Zinc finger protein 687 yes no 2 0.00057611 73.296 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4101500 0 473790 0 0 835600 2792100 7565 568 7669 33876;33877;33878 22352;22353 22352 2 TATVHEVIR SGVPGTGKTATVHEVI ATVHEVIRCLQQAAQA K T A I R C 1 1 0 0 0 0 1 0 1 1 0 0 0 0 0 0 2 0 0 2 0 9 0 1024.5665 Q13415 Q13415 541 549 ORC1 Origin recognition complex subunit 1 yes yes 2 0.017155 71.614 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2338700 0 680790 898340 0 215590 544010 7566 1080 7670 33879;33880;33881;33882 22354 22354 1 TAVAPIER GVAAAISKTAVAPIER TAVAPIERVKLLLQVQ K T A E R V 2 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 1 0 0 1 0 8 0 855.48142 P12236;P12235;Q9H0C2;P05141 P05141 24 31 SLC25A6;SLC25A4;SLC25A31;SLC25A5 ADP/ATP translocase 3;ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 2 0.016506 82.75 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 26721000 5239300 3207900 0 2422900 8810000 7041000 7567 795;826 7671 33883;33884;33885;33886;33887 22355;22356 22355 2 TAVAPIERVK GVAAAISKTAVAPIER VAPIERVKLLLQVQHA K T A V K L 2 1 0 0 0 0 1 0 0 1 0 1 0 0 1 0 1 0 0 2 0 10 1 1082.6448 P12236;P12235;Q9H0C2;P05141 P05141 24 33 SLC25A6;SLC25A4;SLC25A31;SLC25A5 ADP/ATP translocase 3;ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 2 0.0084434 89.827 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 50885000 10693000 3282300 8507800 5937300 16598000 5867500 7568 795;826 7672 33888;33889;33890;33891;33892;33893 22357;22358;22359;22360 22358 4 TAVCDIPPRGLK EWIPNNVKTAVCDIPP DIPPRGLKMSATFIGN K T A L K M 1 1 0 1 1 0 0 1 0 1 1 1 0 0 2 0 1 0 0 1 0 12 1 1325.7126 P68371;E7EWR1;Q5ST81;F5H8C9;Q9BVA1;Q13885;B4DFH6;B4DJ43;P04350;F5H0I4;C9JAA5;Q5SQY0;Q3ZCM7;I3L2F9;A6NNZ2;F8VUJ7;Q5JP53;F8VYX6;F8VW92;P07437;E9PBJ4 P68371 351 362 TUBB4B;TUBB;TUBB2B;TUBB2A;TUBB4A;TUBB8 Tubulin beta-4B chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4A chain;Tubulin beta-8 chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta chain no no 3 0.0018515 81.525 By matching By matching By matching By matching By MS/MS By MS/MS 1 2 1 2 3 2 11209000 173520 1950900 1096600 1112300 2321500 4554500 7569 1007;542 7673 33894;33895;33896;33897;33898;33899;33900;33901;33902;33903;33904 22361;22362;22363 22362 3 TAVHAGNINFK ________________ HAGNINFKWDPKSLEI M T A F K W 2 0 2 0 0 0 0 1 1 1 0 1 0 1 0 0 1 0 0 1 0 11 0 1170.6146 G3XAM7;B4E2G8;P35221;F6XBD8;P35221-2;E5RJZ2;E5RIT8;E5RFM3;E5RJL0;E5RIE0;E5RHV7;E5RGY6;E5RG03;E5RIC3;E5RIB1 G3XAM7 2 12 CTNNA1 Catenin alpha-1 yes no 2 0.0020245 80.014 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 5635200 588990 0 0 0 1975600 3070500 7570 161 7674 33905;33906;33907 22364;22365;22366 22364 3 TCDYAAADSSSLNK GVKPYKCKTCDYAAAD ADSSSLNKHLRIHSDE K T C N K H 3 0 1 2 1 0 0 0 0 0 1 1 0 0 0 3 1 0 1 0 0 14 0 1501.6355 B3KQX0;Q9NPA5-2;E2QRH5;Q5JWM1;Q9NPA5 B3KQX0 49 62 ZFP64 Zinc finger protein 64 homolog, isoforms 1 and 2;Zinc finger protein 64 homolog, isoforms 3 and 4 no no 2 0.0014962 68.972 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 22049000 2362800 3905600 3392700 2322300 4121100 5944400 7571 72 7675 33908;33909;33910;33911;33912;33913 22367;22368;22369;22370;22371 22371 5 TCEGCKGFFK ACQHYGVRTCEGCKGF EGCKGFFKRTVQKNAK R T C F K R 0 0 0 0 2 0 1 2 0 0 0 2 0 2 0 0 1 0 0 0 0 10 1 1232.5318 Q15627;P22736;P22736-2;F5GXF0;Q92570;Q92570-3;E9PBS2;Q92570-2;E9PBQ4;C9J8W4;Q6NXU0;F8W6I3;P43354;F5H4G9 Q92570 308 317 NR4A1;NR4A3;NR4A2 Nuclear receptor subfamily 4 group A member 1;Nuclear receptor subfamily 4 group A member 3;Nuclear receptor subfamily 4 group A member 2 no no 2;3 0.0030427 93.598 By matching By matching By matching By MS/MS By matching By MS/MS 2 2 5279400 0 0 0 1935500 0 3343900 7572 1352;489 7676 33914;33915;33916;33917 22372;22373;22374;22375 22375 4 TCENFIRLCK LHCDLTPKTCENFIRL ENFIRLCKKHYYDGTI K T C C K K 0 1 1 0 2 0 1 0 0 1 1 1 0 1 0 0 1 0 0 0 0 10 1 1339.6377 Q13356;Q13356-2;H7C2D2;E7EW80 Q13356 303 312 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2;Peptidyl-prolyl cis-trans isomerase yes no 3 0.037102 54.722 By matching By matching By matching By matching By matching By MS/MS 1 1 4809200 1320100 0 0 0 0 3489100 7573 1079 7677 33918;33919 22376 22376 1 TCLDNLASKGK DYYKSYIKTCLDNLAS DNLASKGKVSKKPREM K T C G K V 1 0 1 1 1 0 0 1 0 0 2 2 0 0 0 1 1 0 0 0 0 11 1 1205.6074 P46940;H0YLE8 P46940 1533 1543 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 3 0.0010415 93.345 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 30398000 3102900 3835500 4628600 2794100 6452100 9585300 7574 929 7678 33920;33921;33922;33923;33924;33925 22377;22378;22379;22380 22378 4 TCMDPVPSCGK ELGSSSRKTCMDPVPS DPVPSCGKVCGKPLPC K T C G K V 0 0 0 1 2 0 0 1 0 0 0 1 1 0 2 1 1 0 0 1 0 11 0 1250.5094 Q12986;Q12986-2;F5GXD0;Q12986-3 Q12986 614 624 NFX1 Transcriptional repressor NF-X1 yes no 2 0.0074748 68.536 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3813900 0 688550 654830 0 1058900 1411600 7575 1066 7679 33926;33927;33928;33929 22381 22381 1 TCMDVLRENQMYGTNK NQSLMTLRTCMDVLRE NQMYGTNKMVPYRDSK R T C N K M 0 1 2 1 1 1 1 1 0 0 1 1 2 0 0 0 2 0 1 1 0 16 1 1958.8649 Q02241-2;H7BYN4;Q02241;B4E1K0;H0YKQ5 Q02241-2 369 384 KIF23 Kinesin-like protein KIF23 yes no 3 0.0046382 51.004 By MS/MS By matching By matching By matching By matching By matching 1 1 1 4157300 643000 997180 0 0 0 2517200 7576 660 7680 33930;33931;33932 22382 22382 1 TCMYRSEQEELRDK NRWCSLKKTCMYRSEQ EQEELRDKRAYSQKAQ K T C D K R 0 2 0 1 1 1 3 0 0 0 1 1 1 0 0 1 1 0 1 0 0 14 2 1843.8193 Q8N9T8;D3YTE0;Q8N9T8-2 Q8N9T8 563 576 KRI1 Protein KRI1 homolog yes no 3 0.014266 57.425 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 3483000 0 732620 972800 0 941250 836360 7577 1312 7681 33933;33934;33935;33936 22383 22383 1 TCRETEVGDPAGNELAEPEAK LEAKGQEKTCRETEVG ELAEPEAKRIRLEDGQ K T C A K R 3 1 1 1 1 0 5 2 0 0 1 1 0 0 2 0 2 0 0 1 0 21 1 2272.0278 Q96G46-2;Q96G46 Q96G46-2 53 73 DUS3L tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes no 3 0.00012329 58.755 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 5783200 0 1233100 1682100 701530 0 2166500 7578 1387 7682 33937;33938;33939;33940 22384;22385 22384 2 TCSDDVVDYFK FVRVNTLKTCSDDVVD DDVVDYFKRQGFSYQG K T C F K R 0 0 0 3 1 0 0 0 0 0 0 1 0 1 0 1 1 0 1 2 0 11 0 1347.5653 C9JJU9;Q96P11-2;G3V0G9;Q96P11;Q96P11-4;Q96P11-3 C9JJU9 107 117 NSUN5 Putative methyltransferase NSUN5 yes no 2 0.0038821 80.014 By matching By MS/MS By matching By matching By matching By matching 1 12955000 0 12955000 0 0 0 0 7579 255 7683 33941 22386 22386 1 TCSDDVVDYFKR FVRVNTLKTCSDDVVD DVVDYFKRQGFSYQGR K T C K R Q 0 1 0 3 1 0 0 0 0 0 0 1 0 1 0 1 1 0 1 2 0 12 1 1503.6664 C9JJU9;Q96P11-2;G3V0G9;Q96P11;Q96P11-4;Q96P11-3 C9JJU9 107 118 NSUN5 Putative methyltransferase NSUN5 yes no 3 0.0017936 69.864 By matching By MS/MS By matching By matching By matching By matching 1 2438600 0 2438600 0 0 0 0 7580 255 7684 33942 22387 22387 1 TCSPESQQIYGDIK IQVQLCFKTCSPESQQ QQIYGDIKDVRLDGES K T C I K D 0 0 0 1 1 2 1 1 0 2 0 1 0 0 1 2 1 0 1 0 0 14 0 1624.7403 Q4VC44-2;Q4VC44;Q4VC44-3;I3L287;Q4VC44-5;Q4VC44-4 Q4VC44-2 693 706 FLYWCH1 FLYWCH-type zinc finger-containing protein 1 yes no 2 0.025549 42.958 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4635400 844270 1813000 0 0 232470 1745700 7581 1171 7685 33943;33944;33945;33946 22388;22389;22390;22391 22388 4 TCSQVSSYSLEQESNGEIEHVTK LNSGSPEKTCSQVSSY GEIEHVTKRAISTPEK K T C T K R 0 0 1 0 1 2 4 1 1 1 1 1 0 0 0 5 2 0 1 2 0 23 0 2611.1708 P42695 P42695 1388 1410 NCAPD3 Condensin-2 complex subunit D3 yes yes 3 1.9545E-300 172.3 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 46888000 11658000 0 14153000 0 0 21076000 7582 917 7686 33947;33948;33949 22392;22393;22394 22393 3 TCSVSTLSASVHNGAQVK GGYNNQAKTCSVSTLS VHNGAQVKELEESKCQ K T C V K E 2 0 1 0 1 1 0 1 1 0 1 1 0 0 0 4 2 0 0 3 0 18 0 1844.9051 Q9C0D5;Q9C0D5-2 Q9C0D5 1784 1801 TANC1 Protein TANC1 yes no 3 1.0168E-08 94.007 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1795100 1795100 0 0 0 0 0 7583 1473 7687 33950;33951 22395;22396;22397 22396 3 TCTTVAFTQVNSEDK LGRLVHRKTCTTVAFT TQVNSEDKGALAKLVE K T C D K G 1 0 1 1 1 1 1 0 0 0 0 1 0 1 0 1 4 0 0 2 0 15 0 1699.7723 P62424;Q5T8U2 P62424 198 212 RPL7A 60S ribosomal protein L7a yes no 2 0.0011615 69.485 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 10173000 3196200 1556800 0 0 2500700 2919600 7584 991 7688 33952;33953;33954;33955 22398;22399;22400 22400 3 TCTTVAFTQVNSEDKGALAK LGRLVHRKTCTTVAFT EDKGALAKLVEAIRTN K T C A K L 3 0 1 1 1 1 1 1 0 0 1 2 0 1 0 1 4 0 0 2 0 20 1 2140.047 P62424;Q5T8U2 P62424 198 217 RPL7A 60S ribosomal protein L7a yes no 3 9.2746E-12 94.639 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 13474000 9460900 1413000 0 0 967130 1632500 7585 991 7689 33956;33957;33958;33959;33960 22401;22402;22403;22404;22405 22405 5 TCTYEGCSETTSQVAK SGGGSMSKTCTYEGCS ETTSQVAKQRKPWMCK K T C A K Q 1 0 0 0 2 1 2 1 0 0 0 1 0 0 0 2 4 0 1 1 0 16 0 1820.7557 O00287 O00287 140 155 RFXAP Regulatory factor X-associated protein yes yes 2 0.0050292 50.04 By matching By matching By matching By matching By MS/MS By matching 1 1 1149100 0 328170 0 0 820970 0 7586 689 7690 33961;33962 22406 22406 1 TCVADESHAGCEK NELTEFAKTCVADESH ESHAGCEKSLHTLFGD K T C E K S 2 0 0 1 2 0 2 1 1 0 0 1 0 0 0 1 1 0 0 1 0 13 0 1462.5817 CON__P02769 CON__P02769 76 88 yes yes 2;3 3.7687E-09 103.13 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 4 4 3 3 4 433540000 37899000 93242000 232830000 42380000 9329900 17856000 + 7587 294 7691 33963;33964;33965;33966;33967;33968;33969;33970;33971;33972;33973;33974;33975;33976;33977;33978;33979;33980;33981;33982;33983 22407;22408;22409;22410;22411;22412;22413;22414;22415;22416;22417;22418;22419;22420;22421;22422;22423 22408 17 TDAASKPFAEVR VREIENQKTDAASKPF SKPFAEVRILSCGELI K T D V R I 3 1 0 1 0 0 1 0 0 0 0 1 0 1 1 1 1 0 0 1 0 12 1 1290.6568 C9JN15;Q13427-2;Q32LZ0;C9JM79;E9PG73;Q13427 C9JN15 159 170 PPIG Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase G yes no 3 0.0046309 64.945 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 10142000 1143400 1268700 1201600 1251700 1955200 3321400 7588 261 7692 33984;33985;33986;33987;33988;33989 22424 22424 1 TDAAVSFAK ________________ DAAVSFAKDFLAGGVA M T D A K D 3 0 0 1 0 0 0 0 0 0 0 1 0 1 0 1 1 0 0 1 0 9 0 908.46035 P05141 P05141 2 10 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 1;2 0.0077527 77.192 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 2 2 1 2 131050000 25181000 20502000 22373000 30171000 3248300 29573000 7589 795 7693 33990;33991;33992;33993;33994;33995;33996;33997;33998;33999 22425;22426;22427;22428;22429;22430;22431;22432 22432 8 TDEDVCSLECK YGEYICDKTDEDVCSL DVCSLECKAKHLLQVK K T D C K A 0 0 0 2 2 0 2 0 0 0 1 1 0 0 0 1 1 0 0 1 0 11 0 1354.5381 B7Z5N6;Q5T1V6-2;Q5T1V6;Q5T1V5 B7Z5N6 122 132 DDX59 Probable ATP-dependent RNA helicase DDX59 yes no 2 0.0004655 100.93 By matching By MS/MS By matching By matching By matching By matching 1 1 1939100 0 782140 0 0 0 1157000 7590 190 7694 34000;34001 22433 22433 0 TDKQRENYLGNSLMAPVGR QFNWEDVKTDKQRENY SLMAPVGRWQKGRDLT K T D G R W 1 2 2 1 0 1 1 2 0 0 2 1 1 0 1 1 1 0 1 1 0 19 2 2148.0746 Q9BU76-4;Q9BU76;Q9BU76-2;Q9BU76-3 Q9BU76-4 23 41 MMTAG2 Multiple myeloma tumor-associated protein 2 yes no 4 0.018475 37.157 By matching By matching By matching By matching By matching By MS/MS 1 3796200 0 0 0 0 0 3796200 7591 1449 7695 34002 22434 22434 1 TDLDDDITALKQR AKKRSTIKTDLDDDIT DITALKQRSFVDAEVD K T D Q R S 1 1 0 4 0 1 0 0 0 1 2 1 0 0 0 0 2 0 0 0 0 13 1 1502.7577 B4DV47;Q6P1J9 B4DV47 199 211 CDC73 Parafibromin yes no 3 0.0023228 65.295 By matching By matching By matching By matching By matching By MS/MS 1 1 6160700 0 773970 0 0 0 5386700 7592 131 7696 34003;34004 22435 22435 1 TDLPEEKPDATPQNPFLK LRPISKSKTDLPEEKP TPQNPFLKSRPQVRPK K T D L K S 1 0 1 2 0 1 2 0 0 0 2 2 0 1 4 0 2 0 0 0 0 18 1 2039.0211 A1X283 A1X283 620 637 SH3PXD2B SH3 and PX domain-containing protein 2B yes yes 3 0.0029236 51.127 By matching By matching By matching By matching By MS/MS By matching 1 1 19027000 0 0 10033000 0 8994300 0 7593 2 7697 34005;34006 22436 22436 1 TDLYHLQK SQPKGLQKTDLYHLQK TDLYHLQKSLLEMKEL K T D Q K S 0 0 0 1 0 1 0 0 1 0 2 1 0 0 0 0 1 0 1 0 0 8 0 1016.5291 B4E025;Q9UBD5;Q9UBD5-2 B4E025 381 388 ORC3 Origin recognition complex subunit 3 yes no 2 5.0207E-79 157.58 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 28034000 4284300 3741800 5365000 2358700 3073000 9211500 7594 151 7698 34007;34008;34009;34010;34011;34012;34013 22437;22438;22439;22440;22441;22442;22443 22437 7 TDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHKTPASPVVHIR GRAPKRLKTDNAGDQH ASPVVHIRGLIDGVVE K T D I R G 5 1 2 4 0 1 1 17 3 1 0 1 0 0 3 1 2 0 1 2 0 45 1 4037.7985 P14866 P14866 63 107 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 5;6 4.2405E-17 35.139 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 2 1 68089000 8830400 11654000 5596500 8576200 21514000 11918000 7595 838 7699 34014;34015;34016;34017;34018;34019;34020;34021;34022;34023 22444;22445;22446;22447;22448;22449;22450;22451;22452;22453 22451 9 TDNSSLSSPLNPK RKPSKKSKTDNSSLSS LSSPLNPKLWCHVHLK K T D P K L 0 0 2 1 0 0 0 0 0 0 2 1 0 0 2 4 1 0 0 0 0 13 0 1358.6678 Q9UIG0-2;Q9UIG0 Q9UIG0-2 323 335 BAZ1B Tyrosine-protein kinase BAZ1B yes no 2 0.008202 57.434 By MS/MS By MS/MS By matching By matching By matching By matching 2 1 1 1 2 1 14656000 2876900 1860700 1810800 1326800 3201700 3579100 7596 1596 7700 34024;34025;34026;34027;34028;34029;34030;34031 22454;22455 22454 2 TDNVEVTDGENK QTNSKIEKTDNVEVTD EVTDGENKEIKVKVDN K T D N K E 0 0 2 2 0 0 2 1 0 0 0 1 0 0 0 0 2 0 0 2 0 12 0 1319.5841 Q92576-2;Q92576;E7ER40 Q92576-2 1422 1433 PHF3 PHD finger protein 3 yes no 2 0.023949 50.222 By MS/MS By matching By matching By matching By matching By matching 1 529930 529930 0 0 0 0 0 7597 1353 7701 34032 22456 22456 1 TDNVEVTDGENKEIK QTNSKIEKTDNVEVTD DGENKEIKVKVDNISE K T D I K V 0 0 2 2 0 0 3 1 0 1 0 2 0 0 0 0 2 0 0 2 0 15 1 1689.8057 Q92576-2;Q92576;E7ER40 Q92576-2 1422 1436 PHF3 PHD finger protein 3 yes no 3 0.00018597 87.363 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 6235800 580480 1163000 1028700 418300 815530 2229700 7598 1353 7702 34033;34034;34035;34036;34037;34038 22457;22458 22458 2 TDNVEVTDGENKEIKVK QTNSKIEKTDNVEVTD ENKEIKVKVDNISEST K T D V K V 0 0 2 2 0 0 3 1 0 1 0 3 0 0 0 0 2 0 0 3 0 17 2 1916.9691 Q92576-2;Q92576;E7ER40 Q92576-2 1422 1438 PHF3 PHD finger protein 3 yes no 4 0.010199 42.257 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 3439700 517110 633300 1039600 405310 844370 0 7599 1353 7703 34039;34040;34041;34042;34043 22459;22460 22460 2 TDPGTVFVMNK IEVKHVGKTDPGTVFV GTVFVMNKNISTPYSC K T D N K N 0 0 1 1 0 0 0 1 0 0 0 1 1 1 1 0 2 0 0 2 0 11 0 1207.5907 C9JG87;Q9NYK5;Q9NYK5-2 C9JG87 73 83 MRPL39 39S ribosomal protein L39, mitochondrial yes no 2 0.0069307 69.346 By matching By matching By matching By matching By matching By MS/MS 1 892330 0 0 0 0 0 892330 7600 245 7704 34044 22461 22461 1 TDPSTLTEEEVSK LKKLGINKTDPSTLTE LTEEEVSKFARLDIDP K T D S K F 0 0 0 1 0 0 3 0 0 0 1 1 0 0 1 2 3 0 0 1 0 13 0 1434.6726 Q6UB35 Q6UB35 548 560 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 2 0.020053 48.527 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2429800 0 0 0 674570 988850 766350 7601 1235 7705 34045;34046;34047 22462 22462 1 TDQADGPREPPQSAR SAGQQEAKTDQADGPR REPPQSARRKRSYKQA K T D A R R 2 2 0 2 0 2 1 1 0 0 0 0 0 0 3 1 1 0 0 0 0 15 1 1623.7601 Q9NQS7-2;Q9NQS7 Q9NQS7-2 434 448 INCENP Inner centromere protein yes no 3 0.006752 50.897 By matching By matching By matching By matching By matching By MS/MS 2 1 2 3031400 0 0 929360 0 228660 1873400 7602 1531 7706 34048;34049;34050;34051;34052 22463;22464 22464 2 TDRYTIHSQLEHLQSK ________________ QLEHLQSKYIGTGHAD M T D S K Y 0 1 0 1 0 2 1 0 2 1 2 1 0 0 0 2 2 0 1 0 0 16 1 1954.9861 Q9BWJ5 Q9BWJ5 2 17 SF3B5 Splicing factor 3B subunit 5 yes yes 4 8.2691E-19 103.6 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 26857000 3580200 2978400 8617700 0 0 11681000 7603 1459 7707 34053;34054;34055;34056 22465;22466;22467;22468;22469 22467 5 TDSYFNPK PNYSIPQKTDSYFNPK TDSYFNPKMKLNRQLI K T D P K M 0 0 1 1 0 0 0 0 0 0 0 1 0 1 1 1 1 0 1 0 0 8 0 970.43961 Q7Z2T5;Q7Z2T5-2 Q7Z2T5 248 255 TRMT1L TRMT1-like protein yes no 2 0.0074874 94.114 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 16197000 682200 2496000 2363600 646760 2691100 7317800 7604 1248 7708 34057;34058;34059;34060;34061;34062 22470;22471;22472 22470 3 TDSYFNPKMK PNYSIPQKTDSYFNPK SYFNPKMKLNRQLIFC K T D M K L 0 0 1 1 0 0 0 0 0 0 0 2 1 1 1 1 1 0 1 0 0 10 1 1229.5751 Q7Z2T5;Q7Z2T5-2 Q7Z2T5 248 257 TRMT1L TRMT1-like protein yes no 2 0.0080997 91.658 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 5285700 464210 1001400 858840 614630 892120 1454500 7605 1248 7709 34063;34064;34065;34066;34067;34068 22473;22474;22475 22475 3 TDTAEAVPK ________________ DTAEAVPKFEEMFASR M T D P K F 2 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 2 0 0 1 0 9 0 930.46583 Q9BTL3 Q9BTL3 2 10 FAM103A1 RNMT-activating mini protein yes yes 1 0.0043704 73.665 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2 3605800 0 581600 969430 432640 0 1622100 7606 1448 7710 34069;34070;34071;34072;34073 22476;22477 22476 2 TDTGIVTVEQSPSSSKLK LKMKDDSKTDTGIVTV SPSSSKLKVMQTDESN K T D L K V 0 0 0 1 0 1 1 1 0 1 1 2 0 0 1 4 3 0 0 2 0 18 1 1875.9789 Q8NFC6;H0Y9Y2 Q8NFC6 2895 2912 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes no 3 2.0602E-58 120.59 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 24139000 7535400 3467900 3843200 1761200 3344500 4186800 7607 1325 7711 34074;34075;34076;34077;34078;34079 22478;22479;22480;22481;22482;22483 22482 6 TDVCTVHLPNDFPTCLTSESK GLSQSEVKTDVCTVHL TCLTSESKVYQPVSCP K T D S K V 0 0 1 2 2 0 1 0 1 0 2 1 0 1 2 2 4 0 0 2 0 21 0 2420.0988 Q99590-2;F8VXG7;Q99590;F8W028 Q99590-2 224 244 SCAF11 Protein SCAF11 yes no 3 0.0031862 46.569 By matching By matching By matching By matching By MS/MS By matching 1 11619000 0 0 0 0 11619000 0 7608 547 7712 34080 22484 22484 1 TDVSTEHPPFYYNIHR TNLGKKQKTDVSTEHP PFYYNIHRHSIKGMNM K T D H R H 0 1 1 1 0 0 1 0 2 1 0 0 0 1 2 1 2 0 2 1 0 16 0 1974.9224 Q7Z2T5 Q7Z2T5 625 640 TRMT1L TRMT1-like protein yes yes 3;4 0.00051548 81.904 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 13814000 7150800 902320 0 0 0 5760500 7609 1248 7713 34081;34082;34083 22485;22486 22485 2 TDVSTEHPPFYYNIHRHSIK TNLGKKQKTDVSTEHP NIHRHSIKGMNMPKLK K T D I K G 0 1 1 1 0 0 1 0 3 2 0 1 0 1 2 2 2 0 2 1 0 20 1 2440.1924 Q7Z2T5 Q7Z2T5 625 644 TRMT1L TRMT1-like protein yes yes 5 0.040282 29.8 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5421100 0 0 1846700 420710 0 3153700 7610 1248 7714 34084;34085;34086 22487 22487 0 TEAASLRVLER GRRPVLPRTEAASLRV ASLRVLERERRKRSRK R T E E R E 2 2 0 0 0 0 2 0 0 0 2 0 0 0 0 1 1 0 0 1 0 11 1 1243.6884 Q9Y3A4;Q9NSQ0 Q9Y3A4 218 228 RRP7A;RRP7B Ribosomal RNA-processing protein 7 homolog A;Putative ribosomal RNA-processing protein 7 homolog B yes no 3 0.0035604 82.261 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 36936000 0 5494400 4160000 0 0 27282000 7611 1643 7715 34087;34088;34089 22488;22489 22489 2 TEACDRLLAHRVETK EEGVIKVKTEACDRLL LAHRVETKMKGNKVNE K T E T K M 2 2 0 1 1 0 2 0 1 0 2 1 0 0 0 0 2 0 0 1 0 15 2 1797.9156 Q9BZE4;B7Z7A3;B4DY13 Q9BZE4 333 347 GTPBP4 Nucleolar GTP-binding protein 1 yes no 3 0.037715 50.108 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 4980000 0 770040 0 687470 1451900 2070600 7612 1471 7716 34090;34091;34092;34093 22490 22490 0 TEADVNPK ________________ TEADVNPKAYPLADAH M T E P K A 1 0 1 1 0 0 1 0 0 0 0 1 0 0 1 0 1 0 0 1 0 8 0 872.42396 P55769;B1AHD1 P55769 2 9 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes yes 2 0.027803 63.419 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4734700 0 1204600 1864500 779150 0 886530 7613 969 7717 34094;34095;34096;34097 22491;22492 22491 2 TEAESWYQTK EEIANRSRTEAESWYQ AESWYQTKYEELQQTA R T E T K Y 1 0 0 0 0 1 2 0 0 0 0 1 0 0 0 1 2 1 1 0 0 10 0 1241.5564 P13647;CON__P13647;E7EU87;CON__Q5XQN5;CON__Q922U2;H0YI76;H0YIN9 P13647 355 364 KRT5 Keratin, type II cytoskeletal 5 yes no 2 0.013063 69.672 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 2327500 0 623600 792080 417320 0 494520 + 7614 299 7718 34098;34099;34100;34101 22493 22493 1 TEAFTSPEALQPGGTALAPKK LSSTDCFKTEAFTSPE GTALAPKKRSRKGRAG K T E K K R 4 0 0 0 0 1 2 2 0 0 2 2 0 1 3 1 3 0 0 0 0 21 1 2113.1055 Q7Z5J4-3;E7EVZ3;Q7Z5J4;A8MTC3 Q7Z5J4-3 1426 1446 RAI1 Retinoic acid-induced protein 1 yes no 3 0.0017385 47.088 By MS/MS By matching By matching By matching By matching By matching 1 3080200 3080200 0 0 0 0 0 7615 39 7719 34102 22494 22494 1 TEDEHFEFHSRPCPTK QERESKKKTEDEHFEF HSRPCPTKILEDVVGV K T E T K I 0 1 0 1 1 0 3 0 2 0 0 1 0 2 2 1 2 0 0 0 0 16 1 2015.8796 Q9ULW0;Q96RR5 Q9ULW0 450 465 TPX2;HCA90 Targeting protein for Xklp2 yes no 3;4 3.0191E-07 93.478 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 3 64237000 4906100 12328000 13882000 5948300 7715200 19457000 7616 1611 7720 34103;34104;34105;34106;34107;34108;34109;34110;34111;34112;34113;34114;34115;34116 22495;22496;22497;22498;22499;22500;22501;22502 22498 8 TEDEVLTSK GIVAKKQKTEDEVLTS EDEVLTSKGDAWAKYM K T E S K G 0 0 0 1 0 0 2 0 0 0 1 1 0 0 0 1 2 0 0 1 0 9 0 1020.4975 Q9BQ61 Q9BQ61 138 146 C19orf43 Uncharacterized protein C19orf43 yes yes 2 0.0060855 103.88 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 12624000 0 7190700 0 1409700 1414900 2608900 7617 1437 7721 34117;34118;34119;34120 22503;22504;22505;22506 22503 4 TEDEVLTSKGDAWAK GIVAKKQKTEDEVLTS SKGDAWAKYMAEVKKY K T E A K Y 2 0 0 2 0 0 2 1 0 0 1 2 0 0 0 1 2 1 0 1 0 15 1 1648.7944 Q9BQ61 Q9BQ61 138 152 C19orf43 Uncharacterized protein C19orf43 yes yes 2;3 1.412E-105 148.48 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 3 2 193600000 42558000 23858000 52135000 24585000 26334000 24133000 7618 1437 7722 34121;34122;34123;34124;34125;34126;34127;34128;34129;34130;34131;34132;34133;34134 22507;22508;22509;22510;22511;22512;22513;22514;22515;22516 22509 10 TEDGGEFEEGASENNAK IDEKKFEKTEDGGEFE GASENNAKESSPEKEA K T E A K E 2 0 2 1 0 0 5 3 0 0 0 1 0 1 0 1 1 0 0 0 0 17 0 1782.718 O43719;E9PFP2 O43719 434 450 HTATSF1 HIV Tat-specific factor 1 yes no 2 4.4355E-155 149 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 1 29102000 5445400 5758000 4962700 2040300 4489200 6406800 7619 720 7723 34135;34136;34137;34138;34139;34140;34141 22517;22518;22519;22520;22521;22522 22518 6 TEDLGCMYK VHMLKNGKTEDLGCMY EDLGCMYKLFSRVPNG K T E Y K L 0 0 0 1 1 0 1 1 0 0 1 1 1 0 0 0 1 0 1 0 0 9 0 1115.4627 Q13618-3;Q13618-2;Q13618 Q13618-3 227 235 CUL3 Cullin-3 yes no 2 0.025927 66.568 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 3033300 0 834250 1149200 0 0 1049800 7620 1088 7724 34142;34143;34144 22523;22524 22524 2 TEEADLLQTK LKQQWEMKTEEADLLQ EADLLQTKLQQSSYHK K T E T K L 1 0 0 1 0 1 2 0 0 0 2 1 0 0 0 0 2 0 0 0 0 10 0 1146.5768 O95347-2;O95347 O95347-2 723 732 SMC2 Structural maintenance of chromosomes protein 2 yes no 2 0.0061752 70.412 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1887500 0 850410 0 0 0 1037100 7621 770 7725 34145;34146 22525;22526;22527 22527 3 TEEGEIDYSAEEGENRR ESQAKRLKTEEGEIDY AEEGENRREATPRGGG K T E R R E 1 2 1 1 0 0 6 2 0 1 0 0 0 0 0 1 1 0 1 0 0 17 1 1982.8454 Q8WVV9-4;C9J9G0;Q8WVV9;Q5JB52;B7WPG3;Q8WVV9-3;Q8WVV9-2;C9IYN3 Q8WVV9-4 22 38 HNRNPLL;HNRPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 3 0.00083209 74.789 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 26893000 0 10099000 4923000 1353800 0 10517000 7622 236 7726 34147;34148;34149;34150 22528;22529;22530;22531;22532 22530 5 TEEGPTLSYGRDGR LLQLKRRRTEEGPTLS LSYGRDGRSATREPPY R T E G R S 0 2 0 1 0 0 2 3 0 0 1 0 0 0 1 1 2 0 1 0 0 14 1 1536.7168 P43243;A8MXP9;D6REM6;D6R991 P43243 150 163 MATR3 Matrin-3 yes no 3 0.0011285 73.435 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 2 1 1 2 1 1 24823000 3576000 3283500 2945000 4579000 3425600 7014300 7623 52 7727 34151;34152;34153;34154;34155;34156;34157;34158 22533;22534;22535;22536 22534 4 TEEIAEEEETVFPK KEKPKSDKTEEIAEEE EEETVFPKAKQVKKKA K T E P K A 1 0 0 0 0 0 6 0 0 1 0 1 0 1 1 0 2 0 0 1 0 14 0 1649.7672 Q9NR30;Q3SWU7 Q9NR30 41 54 DDX21 Nucleolar RNA helicase 2 yes no 2 0 232.37 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 304160000 0 48431000 0 25582000 186700000 43452000 7624 1534 7728 34159;34160;34161;34162;34163;34164;34165 22537;22538;22539;22540;22541;22542;22543;22544 22537 8 TEEIAEEEETVFPKAK KEKPKSDKTEEIAEEE ETVFPKAKQVKKKAEP K T E A K Q 2 0 0 0 0 0 6 0 0 1 0 2 0 1 1 0 2 0 0 1 0 16 1 1848.8993 Q9NR30;Q3SWU7 Q9NR30 41 56 DDX21 Nucleolar RNA helicase 2 yes no 2;3 0 219.41 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 2 2 100090000 16022000 11119000 21506000 6086300 10774000 34583000 7625 1534 7729 34166;34167;34168;34169;34170;34171;34172;34173;34174;34175 22545;22546;22547;22548;22549;22550;22551;22552;22553 22553 8 TEELEEESFPER PGKEKQRKTEELEEES EEESFPERSKKEDRGK K T E E R S 0 1 0 0 0 0 6 0 0 0 1 0 0 1 1 1 1 0 0 0 0 12 0 1493.6522 Q9Y2W1 Q9Y2W1 487 498 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2 1.7208E-64 142.1 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 1 2 2 1 58138000 13361000 5262300 7834300 6662500 13852000 11166000 7626 1639 7730 34176;34177;34178;34179;34180;34181;34182;34183;34184 22554;22555;22556;22557;22558 22554 5 TEELEEESFPERSK PGKEKQRKTEELEEES ESFPERSKKEDRGKRS K T E S K K 0 1 0 0 0 0 6 0 0 0 1 1 0 1 1 2 1 0 0 0 0 14 1 1708.7792 Q9Y2W1 Q9Y2W1 487 500 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2;3 3.133E-08 99.941 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 2 2 83299000 20723000 8429900 13247000 15380000 12819000 12701000 7627 1639 7731 34185;34186;34187;34188;34189;34190;34191;34192;34193;34194;34195;34196 22559;22560;22561;22562;22563;22564;22565 22559 7 TEELEEESFPERSKK PGKEKQRKTEELEEES SFPERSKKEDRGKRSE K T E K K E 0 1 0 0 0 0 6 0 0 0 1 2 0 1 1 2 1 0 0 0 0 15 2 1836.8741 Q9Y2W1 Q9Y2W1 487 501 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3;4 2.5726E-20 109.95 By MS/MS By matching By MS/MS By MS/MS By matching By matching 2 2 2 2 2 56644000 14469000 0 15046000 16118000 2505800 8504200 7628 1639 7732 34197;34198;34199;34200;34201;34202;34203;34204;34205;34206 22566;22567;22568;22569;22570 22570 5 TEELNREVATNSELVQSGK AEEWFFTKTEELNREV SELVQSGKSEISELRR K T E G K S 1 1 2 0 0 1 4 1 0 0 2 1 0 0 0 2 2 0 0 2 0 19 1 2103.0444 P02533;CON__P02533;Q04695;CON__Q04695;H9KV34;A8MW45;CON__Q9QWL7;F5GWP8 P02533 310 328 KRT14;KRT17;JUP Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 17 no no 3 1.8496E-65 123 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 23562000 1393300 6648400 6348700 3305800 2149400 3716100 + 7629 286;304;485 7733 34207;34208;34209;34210;34211;34212 22571;22572;22573;22574;22575;22576;22577;22578 22576 8 TEEPMETEPK EKAEVKERTEEPMETE EPMETEPKGAADVEKV R T E P K G 0 0 0 0 0 0 4 0 0 0 0 1 1 0 2 0 2 0 0 0 0 10 0 1189.5173 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1601 1610 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 0.0086058 81.017 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 9333000 0 2228200 2053200 0 0 5051700 7630 486 7734 34213;34214;34215 22579;22580;22581 22581 3 TEEPMETEPKGAADVEK EKAEVKERTEEPMETE KGAADVEKVEEKSAID R T E E K V 2 0 0 1 0 0 5 1 0 0 0 2 1 0 2 0 2 0 0 1 0 17 1 1859.8459 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1601 1617 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2;3 0.00031769 83.292 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 3 1 3 3 111820000 849840 30943000 21664000 1467400 3317300 53575000 7631 486 7735;7736 34216;34217;34218;34219;34220;34221;34222;34223;34224;34225;34226;34227;34228 22582;22583;22584;22585;22586;22587;22588;22589;22590;22591;22592;22593;22594 22584 56 13 TEEPMETEPKGAADVEKVEEK EKAEVKERTEEPMETE DVEKVEEKSAIDLTPI R T E E K S 2 0 0 1 0 0 7 1 0 0 0 3 1 0 2 0 2 0 0 2 0 21 2 2345.0944 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1601 1621 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3;4 3.0033E-07 82.755 By matching By matching By MS/MS By matching By matching By MS/MS 2 1 7100600 0 0 5834100 0 0 1266500 7632 486 7737 34229;34230;34231 22595;22596;22597;22598;22599 22596 5 TEEQGIPRPLHPPPPPPVQPPQHPR VDRPSETKTEEQGIPR VQPPQHPRAEQREQER K T E P R A 0 2 0 0 0 3 2 1 2 1 1 0 0 0 11 0 1 0 0 1 0 25 1 2797.4776 E7EQT4;Q9UKV3;Q9UKV3-5;Q9UKV3-3;Q9UKV3-2;G3V3B0 E7EQT4 1068 1092 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 5 0.016141 46.154 By matching By matching By matching By matching By MS/MS By matching 1 7473200 0 0 0 0 7473200 0 7633 364 7738 34232 22600 22600 1 TEESESQVEPEIK GVERIMKKTEESESQV SQVEPEIKRKVQQKRH K T E I K R 0 0 0 0 0 1 5 0 0 1 0 1 0 0 1 2 1 0 0 1 0 13 0 1503.694 Q9GZR1-2;Q9GZR1;E7EQN6;H0Y4F4;F8W6D9;D6RG09 Q9GZR1-2 183 195 SENP6 Sentrin-specific protease 6 yes no 2 0.014828 51.726 By matching By matching By matching By matching By matching By MS/MS 1 611410 0 0 0 0 0 611410 7634 361 7739 34233 22601 22601 1 TEETGPGMDEEDSELVAK DEEEEDNKTEETGPGM EDSELVAKDDNLDSGN K T E A K D 1 0 0 2 0 0 5 2 0 0 1 1 1 0 1 1 2 0 0 1 0 18 0 1935.8255 Q9NU22 Q9NU22 4795 4812 MDN1 Midasin yes yes 2 0.0057298 46.121 By matching By matching By matching By matching By matching By MS/MS 1 637560 0 0 0 0 0 637560 7635 1544 7740 34234 22602 22602 1 TEICEEAEKPLIISER NLQLLVPKTEICEEAE KPLIISERIQKADPQG K T E E R I 1 1 0 0 1 0 5 0 0 3 1 1 0 0 1 1 1 0 0 0 0 16 1 1915.9561 P13682 P13682 126 141 ZNF35 Zinc finger protein 35 yes yes 3 1.9649E-27 112.34 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 11299000 8727100 0 0 0 2572100 0 7636 835 7741 34235;34236 22603;22604 22604 2 TEICEEAEKPLIISERIQK NLQLLVPKTEICEEAE IISERIQKADPQGPEL K T E Q K A 1 1 0 0 1 1 5 0 0 4 1 2 0 0 1 1 1 0 0 0 0 19 2 2285.1937 P13682 P13682 126 144 ZNF35 Zinc finger protein 35 yes yes 4 0.0061305 53.861 By matching By matching By matching By MS/MS By matching By matching 1 1 3652200 0 2074000 0 1578200 0 0 7637 835 7742 34237;34238 22605 22605 0 TEIEQTKIKGDVAGK PDNITNEKTEIEQTKI IKGDVAGKKNEKSVKA K T E G K K 1 0 0 1 0 1 2 2 0 2 0 3 0 0 0 0 2 0 0 1 0 15 2 1615.8781 Q13127;Q13127-4;F8WAN5 Q13127 446 460 REST RE1-silencing transcription factor yes no 3 0.039084 57.794 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2986600 0 0 757780 884710 448430 895720 7638 1072 7743 34239;34240;34241;34242 22606 22606 0 TEIISEVNHLDNDK LRQKVNRKTEIISEVN VNHLDNDKSIEYTVKS K T E D K S 0 0 2 2 0 0 2 0 1 2 1 1 0 0 0 1 1 0 0 1 0 14 0 1625.7897 Q562F6-2;Q562F6 Q562F6-2 720 733 SGOL2 Shugoshin-like 2 yes no 3 0.0048369 55.335 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2989100 0 1060300 0 0 0 1928800 7639 1175 7744 34243;34244 22607;22608 22607 2 TELGSQTPESSR CQLSSYAKTELGSQTP SQTPESSRSEASRILD K T E S R S 0 1 0 0 0 1 2 1 0 0 1 0 0 0 1 3 2 0 0 0 0 12 0 1290.6052 F8VXI8;Q9H9L4;F8VX10;H0YIQ8;H0YID1;F8VUX5;Q9H9L4-4 F8VXI8 125 136 KANSL2 KAT8 regulatory NSL complex subunit 2 yes no 2 0.029581 47.712 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1576200 0 0 370430 0 311530 894200 7640 546 7745 34245;34246;34247 22609;22610 22610 2 TELLGEETPMAADEGSAEK PQQDCCVKTELLGEET ADEGSAEKQAGEAHMA K T E E K Q 3 0 0 1 0 0 5 2 0 0 2 1 1 0 1 1 2 0 0 0 0 19 0 1976.8885 Q9H9B1-3;Q9H9B1;Q9H9B1-4 Q9H9B1-3 23 41 EHMT1 Histone-lysine N-methyltransferase EHMT1 yes no 2 1.9751E-81 125.51 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 25561000 3810200 7254500 0 2828100 0 11669000 7641 1507 7746 34248;34249;34250;34251 22611;22612;22613;22614;22615 22613 5 TELNSSAESEQPLDK DLEKSKIKTELNSSAE ESEQPLDKTGHVKDTN K T E D K T 1 0 1 1 0 1 3 0 0 0 2 1 0 0 1 3 1 0 0 0 0 15 0 1646.7635 Q9Y5B6-3;Q9Y5B6-4;Q9Y5B6-2;Q9Y5B6 Q9Y5B6-3 150 164 PAXBP1 PAX3- and PAX7-binding protein 1 yes no 2 0.00034482 85.493 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 8362200 1040600 1690600 1244100 834590 1474400 2077800 7642 1652 7747 34252;34253;34254;34255;34256;34257 22616;22617;22618;22619;22620;22621 22619 6 TEMDKSPFNSPSPQDSPR GISSPVKKTEMDKSPF PSPQDSPRLSSFTQHH K T E P R L 0 1 1 2 0 1 1 0 0 0 0 1 1 1 4 4 1 0 0 0 0 18 1 2018.9004 P08651-4;P08651-5;P08651-3;P08651-2;P08651;F8W9H9 P08651-4 295 312 NFIC Nuclear factor 1 C-type yes no 3 4.3911E-08 91.065 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 23571000 0 3314000 3532100 2638900 4201100 9884900 7643 563 7748 34258;34259;34260;34261;34262;34263 22622;22623;22624;22625;22626 22623 5 TEMQDNTYPEILR LYTEKAYKTEMQDNTY NTYPEILRSNLGSVVL K T E L R S 0 1 1 1 0 1 2 0 0 1 1 0 1 0 1 0 2 0 1 0 0 13 0 1608.7454 F5H6K0;O43143 F5H6K0 481 493 DHX15 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 2 0.020151 48.467 By matching By MS/MS By matching By matching By matching By matching 1 1 6727200 0 5312600 0 1414600 0 0 7644 524 7749 34264;34265 22627 22627 1 TENSGEALAKVEDSNPQK GLSGKRTKTENSGEAL VEDSNPQKTSATKNCL K T E Q K T 2 0 2 1 0 1 3 1 0 0 1 2 0 0 1 2 1 0 0 1 0 18 1 1915.9123 Q9P016;Q9P016-2;E9PPQ6 Q9P016 25 42 THYN1 Thymocyte nuclear protein 1 yes no 3 0.00063966 81.01 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 6784600 0 530180 2607900 1893000 1753500 0 7645 1570 7750 34266;34267;34268;34269 22628;22629;22630 22630 3 TEPEEVSIEDSAQSDLK TKLKPRLKTEPEEVSI DSAQSDLKEVMVLNAT K T E L K E 1 0 0 2 0 1 4 0 0 1 1 1 0 0 1 3 1 0 0 1 0 17 0 1875.8585 Q16666-3;Q16666-2;Q16666;H3BLV7;E7EPR3 Q16666-3 450 466 IFI16 Gamma-interferon-inducible protein 16 yes no 2 8.19E-08 92.439 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 4299700 2433600 1017300 0 0 0 848760 7646 1155 7751 34270;34271;34272 22631;22632 22632 2 TEPSKFPFPTKESQQSNFGTGEQK TAIHTPCKTEPSKFPF NFGTGEQKRYNPSKTS K T E Q K R 0 0 1 0 0 3 3 2 0 0 0 3 0 3 3 3 3 0 0 0 0 24 2 2698.2875 Q9UHB7;Q9UHB7-2 Q9UHB7 340 363 AFF4 AF4/FMR2 family member 4 yes no 4 0.010082 36.096 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 4456200 3357200 0 0 0 1099100 0 7647 1592 7752 34273;34274 22633;22634 22634 2 TEQAISFAK ________________ EQAISFAKDFLAGGIA M T E A K D 2 0 0 0 0 1 1 0 0 1 0 1 0 1 0 1 1 0 0 0 0 9 0 993.51311 P12236 P12236 2 10 SLC25A6 ADP/ATP translocase 3 yes yes 2 5.0307E-20 112.3 By MS/MS By matching By matching By matching By matching By matching 1 95007000 95007000 0 0 0 0 0 7648 826 7753 34275 22635 22635 1 TEQEEDEELLTESSK VGDYRHRRTEQEEDEE ELLTESSKATNVCTRF R T E S K A 0 0 0 1 0 1 6 0 0 0 2 1 0 0 0 2 2 0 0 0 0 15 0 1765.7741 F5GZI1;O60264 F5GZI1 89 103 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 yes no 2 0.0025691 58.98 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 1 12253000 1173900 1563900 1240300 0 3917000 4358100 7649 500 7754 34276;34277;34278;34279;34280;34281 22636;22637;22638;22639 22637 4 TEQEVVEGMDISTR SLAEEEIKTEQEVVEG EGMDISTRSKDPGSAE K T E T R S 0 1 0 1 0 1 3 1 0 1 0 0 1 0 0 1 2 0 0 2 0 14 0 1592.7352 Q9ULU4-14;Q2HXV3;Q9ULU4-12;Q9ULU4-13;B7ZM62;Q9ULU4-8;Q2HXV1;Q9ULU4-5;Q9ULU4-10;Q9ULU4-7;E7ETU8;F5H0X3 Q9ULU4-14 13 26 ZMYND8 Protein kinase C-binding protein 1 yes no 2 0.020765 44.925 By matching By MS/MS By matching By matching By matching By matching 1 810030 0 810030 0 0 0 0 7650 1160 7755 34282 22640 22640 1 TEQQESDSVQCMPVAK LPLVSRVKTEQQESDS VQCMPVAKRLWDSGQK K T E A K R 1 0 0 1 1 3 2 0 0 0 0 1 1 0 1 2 1 0 0 2 0 16 0 1835.803 Q96RE7 Q96RE7 168 183 NACC1 Nucleus accumbens-associated protein 1 yes yes 2 0.002272 57.703 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 11056000 0 0 3841700 699710 0 6514100 7651 1417 7756 34283;34284;34285 22641;22642;22643 22643 3 TERASAQQENSSTCIGSAIK DHAKTSAKTERASAQQ TCIGSAIKSESGNSAR K T E I K S 3 1 1 0 1 2 2 1 0 2 0 1 0 0 0 4 2 0 0 0 0 20 1 2137.007 Q9NXV6 Q9NXV6 165 184 CDKN2AIP CDKN2A-interacting protein yes yes 3 0.00014128 66.536 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 39099000 12063000 3993000 6662600 5958900 5046400 5375300 7652 1560 7757 34286;34287;34288;34289;34290;34291 22644;22645;22646;22647 22647 4 TERASAQQENSSTCIGSAIKSESGNSAR DHAKTSAKTERASAQQ SESGNSARSSGISSQN K T E A R S 4 2 2 0 1 2 3 2 0 2 0 1 0 0 0 7 2 0 0 0 0 28 2 2925.3483 Q9NXV6 Q9NXV6 165 192 CDKN2AIP CDKN2A-interacting protein yes yes 4 0.0017792 36.948 By MS/MS By matching By matching By matching By matching By matching 1 1216700 1216700 0 0 0 0 0 7653 1560 7758 34292 22648 22648 1 TERCPLLYQWHRK TLSREERKTERCPLLY LLYQWHRKQYVGAAHG K T E R K Q 0 2 0 0 1 1 1 0 1 0 2 1 0 0 1 0 1 1 1 0 0 13 2 1785.9097 Q9NS86 Q9NS86 245 257 LANCL2 LanC-like protein 2 yes yes 3;4 0.0014986 80.871 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 2 2 28885000 0 0 3945200 2651600 8781500 13506000 7654 1541 7759 34293;34294;34295;34296;34297;34298 22649;22650;22651;22652 22650 4 TERFDCHHCNESLFGK ________________ CNESLFGKKYILREES M T E G K K 0 1 1 1 2 0 2 1 2 0 1 1 0 2 0 1 1 0 0 0 0 16 1 2035.8629 Q14192;C9J3S8;F8WDA8;Q5TM15 Q14192 2 17 FHL2 Four and a half LIM domains protein 2 yes no 3;4 0.00071798 64.476 By matching By matching By matching By matching By MS/MS By MS/MS 2 1 1 1 2 2 53937000 11308000 1375700 6804300 9267200 11980000 13202000 7655 1101 7760 34299;34300;34301;34302;34303;34304;34305;34306;34307 22653;22654;22655 22653 2 TERFGQGGAGPVGGQGPR SMMGSDMRTERFGQGG PVGGQGPRGMGPGTPA R T E P R G 1 2 0 0 0 2 1 7 0 0 0 0 0 1 2 0 1 0 0 1 0 18 1 1726.8499 P23246 P23246 664 681 SFPQ Splicing factor, proline- and glutamine-rich yes yes 3 0.0017248 56.817 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 8956300 1008200 1654700 0 895750 2881200 2516500 7656 865 7761 34308;34309;34310;34311;34312 22656 22656 1 TESSPSEASQHSMQSPQK PIVKNIAKTESSPSEA HSMQSPQKTTLILPTQ K T E Q K T 1 0 0 0 0 3 2 0 1 0 0 1 1 0 2 6 1 0 0 0 0 18 0 1944.8483 B4DZR9;Q9UQR0 B4DZR9 221 238 SCML2 Sex comb on midleg-like protein 2 yes no 3 0.0014311 62.916 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 3 1 1 1 2 1 35955000 7651900 3350600 5061100 5229000 9531300 5131500 7657 149 7762 34313;34314;34315;34316;34317;34318;34319;34320;34321 22657;22658;22659;22660;22661;22662;22663 22662 6 TETDSVGTPQSNGGMR NSRQLEPRTETDSVGT PQSNGGMRLHDFVSKT R T E M R L 0 1 1 1 0 1 1 3 0 0 0 0 1 0 1 2 3 0 0 1 0 16 0 1635.7159 Q9H0H5;F8VRD2;H0YIK5 Q9H0H5 270 285 RACGAP1 Rac GTPase-activating protein 1 yes no 2 0.0019344 59.673 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 9519300 609020 1641100 1073400 0 1809400 4386400 7658 1479 7763 34322;34323;34324;34325;34326 22664;22665 22665 2 TETDSVGTPQSNGGMRLHDFVSK NSRQLEPRTETDSVGT RLHDFVSKTVIKPESC R T E S K T 0 1 1 2 0 1 1 3 1 0 1 1 1 1 1 3 3 0 0 2 0 23 1 2462.1496 Q9H0H5;F8VRD2;H0YIK5 Q9H0H5 270 292 RACGAP1 Rac GTPase-activating protein 1 yes no 3;4 1.1239E-08 75.319 By MS/MS By matching By MS/MS By matching By MS/MS By matching 2 2 2 1 2 2 37027000 9096800 3622400 11469000 948780 6858000 5032800 7659 1479 7764 34327;34328;34329;34330;34331;34332;34333;34334;34335;34336;34337 22666;22667;22668;22669;22670 22666 5 TETEFPDEDEETR AQPKEEAKTETEFPDE PDEDEETRLYRLKIEE K T E T R L 0 1 0 2 0 0 5 0 0 0 0 0 0 1 1 0 3 0 0 0 0 13 0 1596.6427 H0Y3K4;Q96EV2 H0Y3K4 548 560 RBM33 RNA-binding protein 33 yes no 2 0.0022316 70.438 By matching By matching By matching By matching By matching By MS/MS 1 1 1819600 0 842890 0 0 0 976750 7660 607 7765 34338;34339 22671 22671 1 TETVVDDWDEEFDRGKEK IEDSRQARTETVVDDW EFDRGKEKKIKKFKRE R T E E K K 0 1 0 4 0 0 4 1 0 0 0 2 0 1 0 0 2 1 0 2 0 18 2 2196.9811 Q9P275;Q9P275-2;E9PEW0 Q9P275 1063 1080 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 3 2.6803E-131 144.29 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 44651000 0 0 15350000 0 5938700 23363000 7661 1576 7766 34340;34341;34342 22672;22673;22674 22672 3 TETYPQGQPVKFPANANSTK QSALKKIKTETYPQGQ PANANSTKEEVEMNWD K T E T K E 2 0 2 0 0 2 1 1 0 0 0 2 0 1 3 1 3 0 1 1 0 20 1 2177.0753 Q8N5C6 Q8N5C6 186 205 SRBD1 S1 RNA-binding domain-containing protein 1 yes yes 3 0.032801 34.174 By matching By MS/MS By matching By matching By matching By matching 1 1 1 9094400 0 4378100 0 0 807580 3908700 7662 1302 7767 34343;34344;34345 22675 22675 1 TEVCQTCSKLK GVRMRFKKTEVCQTCS CQTCSKLKNVCQTCLL K T E L K N 0 0 0 0 2 1 1 0 0 0 1 2 0 0 0 1 2 0 0 1 0 11 1 1352.6428 E5RJW4;Q9NW64;E5RHA8 E5RJW4 61 71 RBM22 Pre-mRNA-splicing factor RBM22 yes no 3 0.0025417 87.184 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1715600 0 481780 938680 0 295130 0 7663 345 7768 34346;34347;34348 22676;22677 22676 2 TEVNYTQLVDLHAR NVASQUGKTEVNYTQL QLVDLHARYAECGLRI K T E A R Y 1 1 1 1 0 1 1 0 1 0 2 0 0 0 0 0 2 0 1 2 0 14 0 1657.8424 P36969-2;P36969 P36969-2 49 62 GPX4 Phospholipid hydroperoxide glutathione peroxidase, mitochondrial yes no 2;3 4.2386E-08 99.161 By matching By MS/MS By matching By MS/MS By matching By matching 1 2 44175000 0 31970000 0 12205000 0 0 7664 902 7769 34349;34350;34351 22678;22679;22680 22679 3 TEVSPVPR PAEAPTEKTEVSPVPR TEVSPVPRTDSHEARA K T E P R T 0 1 0 0 0 0 1 0 0 0 0 0 0 0 2 1 1 0 0 2 0 8 0 883.47633 E9PPY3;O43159 E9PPY3 220 227 RRP8 Ribosomal RNA-processing protein 8 yes no 2 0.0074874 94.114 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 8253700 379980 1975900 2502700 0 0 3395100 7665 462 7770 34352;34353;34354;34355 22681;22682 22682 2 TEVSPVPRTDSHEAR PAEAPTEKTEVSPVPR RTDSHEARAGALRARM K T E A R A 1 2 0 1 0 0 2 0 1 0 0 0 0 0 2 2 2 0 0 2 0 15 1 1679.8227 E9PPY3;O43159 E9PPY3 220 234 RRP8 Ribosomal RNA-processing protein 8 yes no 3;4 0.0028202 64.224 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 3 3 57890000 4461700 11657000 7931400 3658100 7424200 22758000 7666 462 7771 34356;34357;34358;34359;34360;34361;34362;34363;34364;34365;34366;34367;34368;34369;34370 22683;22684;22685;22686;22687;22688;22689;22690;22691;22692 22688 10 TEVSQWEKPK KKYYYNCRTEVSQWEK VSQWEKPKEWLEREQR R T E P K E 0 0 0 0 0 1 2 0 0 0 0 2 0 0 1 1 1 1 0 1 0 10 1 1230.6245 Q9BTA9-2;Q9BTA9;Q9BTA9-5;B4DMH1;Q9BTA9-3;C9JVK6;C9JD58 Q9BTA9-2 107 116 WAC WW domain-containing adapter protein with coiled-coil yes no 3 0.0086555 82.417 By matching By matching By matching By matching By matching By MS/MS 1 1 3027500 0 447270 0 0 0 2580200 7667 1446 7772 34371;34372 22693;22694 22694 2 TEWLDGK QFFICTAKTEWLDGKH KTEWLDGKHVVFGKVK K T E G K H 0 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 1 1 0 0 0 7 0 847.40758 P62937;B4DM82;Q567Q0;Q9Y536;F5H284;A2BFH1 P62937 119 125 PPIA;PPIAL4A;PPIAL4D;PPIAL4G Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase A-like 4D;Peptidyl-prolyl cis-trans isomerase A-like 4G yes no 2 0.011512 91.9 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 17513000 2016300 3963300 0 1421600 0 10112000 7668 999 7773 34373;34374;34375;34376 22695 22695 1 TEWLDGKHVVFGK QFFICTAKTEWLDGKH GKHVVFGKVKEGMNIV K T E G K V 0 0 0 1 0 0 1 2 1 0 1 2 0 1 0 0 1 1 0 2 0 13 1 1514.7882 P62937;B4DM82;Q567Q0 P62937 119 131 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 3 1.9355E-34 120.55 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 299990000 35536000 16601000 43745000 13236000 15307000 175570000 7669 999 7774 34377;34378;34379;34380;34381;34382;34383 22696;22697;22698;22699;22700 22699 5 TEWLDGKHVVFGKVK QFFICTAKTEWLDGKH HVVFGKVKEGMNIVEA K T E V K E 0 0 0 1 0 0 1 2 1 0 1 3 0 1 0 0 1 1 0 3 0 15 2 1741.9515 P62937;B4DM82;Q567Q0 P62937 119 133 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 3;4 2.2474E-56 130.61 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 2 2 482540000 62447000 3103800 288390000 18877000 29396000 80327000 7670 999 7775 34384;34385;34386;34387;34388;34389;34390;34391;34392 22701;22702;22703;22704;22705;22706;22707;22708 22707 8 TEYEEAQDAIVK NEEYTKNKTEYEEAQD EAQDAIVKEIVNISSG K T E V K E 2 0 0 1 0 1 3 0 0 1 0 1 0 0 0 0 1 0 1 1 0 12 0 1394.6565 B4E2Z2;P43246;E9PHA6;B4DL39;B4DSB9 B4E2Z2 502 513 MSH2 DNA mismatch repair protein Msh2 yes no 2 0.026023 49.298 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2075800 0 752900 0 0 0 1322900 7671 162 7776 34393;34394 22709;22710 22709 2 TFANSSYLAQHIR HKCPHCSKTFANSSYL SYLAQHIRIHSGAKPY K T F I R I 2 1 1 0 0 1 0 0 1 1 1 0 0 1 0 2 1 0 1 0 0 13 0 1506.7579 Q8TF68-3;F8W6Q3;Q8TF68-2;Q8TF68;E9PHB3;F5H8L7 Q8TF68-3 209 221 ZNF384 Zinc finger protein 384 yes no 2;3 4.8744E-155 162.31 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 1 1 2 2 92880000 28354000 3831900 5812100 543300 45679000 8659400 7672 555 7777 34395;34396;34397;34398;34399;34400;34401;34402;34403;34404 22711;22712;22713;22714;22715;22716;22717;22718 22714 7 TFANSSYLAQHIRIHSGAKPYSCNFCEK HKCPHCSKTFANSSYL YSCNFCEKSFRQLSHL K T F E K S 3 1 2 0 2 1 1 1 2 2 1 2 0 2 1 4 1 0 2 0 0 28 2 3285.5448 Q8TF68-3;F8W6Q3;Q8TF68-2;Q8TF68;E9PHB3;F5H8L7 Q8TF68-3 209 236 ZNF384 Zinc finger protein 384 yes no 4;5 0.011167 39.59 By matching By matching By matching By MS/MS By matching By matching 2 98307000 0 0 0 98307000 0 0 7673 555 7778 34405;34406 22719;22720 22719 2 TFEECQQNLMK EVADCFKKTFEECQQN ECQQNLMKLQKGHVSL K T F M K L 0 0 1 0 1 2 2 0 0 0 1 1 1 1 0 0 1 0 0 0 0 11 0 1426.6221 P49792;E9PGT0 P49792 3036 3046 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 2 4.1773E-55 139.38 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 21985000 0 2980700 3163100 2627300 5332500 7881300 7674 945 7779 34407;34408;34409;34410;34411;34412 22721;22722;22723;22724;22725;22726 22722 6 TFEELEHVSAPYK LKAMLNCKTFEELEHV EHVSAPYKTGSKGTKA K T F Y K T 1 0 0 0 0 0 3 0 1 0 1 1 0 1 1 1 1 0 1 1 0 13 0 1548.746 Q8N5C6 Q8N5C6 304 316 SRBD1 S1 RNA-binding domain-containing protein 1 yes yes 2;3 1.758E-274 186.16 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 2 1 1 1 2 109450000 36864000 21188000 11087000 17197000 2213700 20896000 7675 1302 7780 34413;34414;34415;34416;34417;34418;34419;34420;34421 22727;22728;22729;22730;22731;22732;22733;22734 22728 7 TFEELEHVSAPYKTGSK LKAMLNCKTFEELEHV APYKTGSKGTKAQRAR K T F S K G 1 0 0 0 0 0 3 1 1 0 1 2 0 1 1 2 2 0 1 1 0 17 1 1921.9422 Q8N5C6 Q8N5C6 304 320 SRBD1 S1 RNA-binding domain-containing protein 1 yes yes 3;4 2.7774E-73 127.29 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 2 1 1 40641000 18677000 3060200 14776000 2429800 0 1698700 7676 1302 7781 34422;34423;34424;34425;34426;34427 22735;22736;22737;22738;22739;22740 22736 6 TFEGHDASVLK LQDFSCLKTFEGHDAS GHDASVLKVAFVSRGT K T F L K V 1 0 0 1 0 0 1 1 1 0 1 1 0 1 0 1 1 0 0 1 0 11 0 1202.5932 Q12788 Q12788 558 568 TBL3 Transducin beta-like protein 3 yes yes 2 0.00047243 101.39 By matching By matching By matching By matching By MS/MS By MS/MS 1 2 1 2623500 0 277490 0 0 837100 1508900 7677 1058 7782 34428;34429;34430;34431 22741;22742 22741 1 TFFEELAVEDKQAGEEEK KKDKKIKKTFFEELAV KQAGEEEKVLKEKEQQ K T F E K V 2 0 0 1 0 1 6 1 0 0 1 2 0 2 0 0 1 0 0 1 0 18 1 2097.9742 E9PC67;F8VQZ0;Q5STZ8;Q8NE71;Q8NE71-2;Q5STZ7 Q8NE71 40 57 ABCF1 ATP-binding cassette sub-family F member 1 no no 3 4.2876E-210 163.9 By matching By matching By matching By MS/MS By matching By matching 1 30702000 0 0 0 30702000 0 0 7678 1321;411 7783 34432 22743 22743 1 TFGPVYEGK YLFPIQVKTFGPVYEG FGPVYEGKDLIAQART K T F G K D 0 0 0 0 0 0 1 2 0 0 0 1 0 1 1 0 1 0 1 1 0 9 0 996.49165 F5H3H6;Q9BQ39 F5H3H6 167 175 DDX50 ATP-dependent RNA helicase DDX50 yes no 2 0.023859 67.704 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 6744600 1378200 1518500 0 937200 0 2910700 7679 515 7784 34433;34434;34435;34436 22744;22745 22744 2 TFGSTSQSSSFSK ALKQDVKRTFGSTSQS SQSSSFSKIHKRPHRI R T F S K I 0 0 0 0 0 1 0 1 0 0 0 1 0 2 0 6 2 0 0 0 0 13 0 1349.6099 Q9H582-2;Q9H582;F5GWV4 Q9H582-2 664 676 ZNF644 Zinc finger protein 644 yes no 2 0.023047 47.037 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1304900 0 0 0 0 562370 742560 7680 1492 7785 34437;34438 22746;22747 22747 2 TFHLVNPNGQK PELKSLAKTFHLVNPN LVNPNGQKQQLVDAFL K T F Q K Q 0 0 2 0 0 1 0 1 1 0 1 1 0 1 1 0 1 0 0 1 0 11 0 1253.6517 Q9Y2M0-2;Q9Y2M0;H3BUK3 Q9Y2M0-2 483 493 FAN1 Fanconi-associated nuclease 1 yes no 3 0.031038 49.189 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 6582300 0 898290 1193900 950440 1437900 2101800 7681 1634 7786 34439;34440;34441;34442;34443 22748 22748 1 TFLEFYEEKIKNNENK NMKLVYKKTFLEFYEE KIKNNENKMLLKRMQA K T F N K M 0 0 3 0 0 0 4 0 0 1 1 3 0 2 0 0 1 0 1 0 0 16 2 2045.0106 O43148;O43148-2;F5H2D9 O43148 394 409 RNMT mRNA cap guanine-N7 methyltransferase yes no 3 3.3078E-07 81.327 By matching By matching By matching By MS/MS By matching By matching 1 5625100 0 0 0 5625100 0 0 7682 709 7787 34444 22749 22749 0 TFLTNDQTK KSGLKDFKTFLTNDQT FLTNDQTKVTEEENKG K T F T K V 0 0 1 1 0 1 0 0 0 0 1 1 0 1 0 0 3 0 0 0 0 9 0 1066.5295 P49792;E9PGT0;P0DJD0;P0DJD1;F8VYC4;Q99666;O14715;E7ES93;B4DTM4;Q7Z3J3 P49792 2182 2190 RANBP2;RGPD1;RGPD2;RGPD5;RGPD8;RGPD4 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8;RanBP2-like and GRIP domain-containing protein 4 no no 2 2.2966E-41 137.95 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 29956000 2621500 8967400 5845900 1620200 4557400 6343800 7683 945;1251 7788 34445;34446;34447;34448;34449;34450 22750;22751;22752;22753 22752 4 TFNIKNDFTEEEEAQVRK KTPEEIRKTFNIKNDF EEEAQVRKENQWCEEK K T F R K E 1 1 2 1 0 1 4 0 0 1 0 2 0 2 0 0 2 0 0 1 0 18 2 2197.0651 P63208;E5RJR5 P63208 138 155 SKP1 S-phase kinase-associated protein 1 yes no 4 0.0014905 61.962 By matching By MS/MS By matching By matching By matching By matching 1 1 5186300 0 3178200 0 2008100 0 0 7684 344 7789 34451;34452 22754 22754 1 TFNLEKQNHTPRK ________________ KQNHTPRKHHQHHHQQ K T F R K H 0 1 2 0 0 1 1 0 1 0 1 2 0 1 1 0 2 0 0 0 0 13 2 1611.8481 Q15233;C9JYS8;C9IZL7;C9J4X2;C9JJ13 Q15233 6 18 NONO Non-POU domain-containing octamer-binding protein yes no 4 0.013278 51.726 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 10372000 0 662240 2044800 3455400 2580100 1629200 7685 1133 7790 34453;34454;34455;34456;34457 22755;22756 22756 2 TFNPGAGLPTDK KDIARRSKTFNPGAGL GAGLPTDKKKGGPSPG K T F D K K 1 0 1 1 0 0 0 2 0 0 1 1 0 1 2 0 2 0 0 0 0 12 0 1216.6088 P09661;H0YLR3;H0YMA0 P09661 180 191 SNRPA1 U2 small nuclear ribonucleoprotein A yes no 2 0.00035399 94.781 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 2 1 46079000 8940200 9074300 2669500 2467400 9858900 13068000 7686 814 7791 34458;34459;34460;34461;34462;34463;34464 22757;22758;22759;22760;22761;22762 22762 6 TFNPGAGLPTDKK KDIARRSKTFNPGAGL AGLPTDKKKGGPSPGD K T F K K K 1 0 1 1 0 0 0 2 0 0 1 2 0 1 2 0 2 0 0 0 0 13 1 1344.7038 P09661;H0YLR3;H0YMA0 P09661 180 192 SNRPA1 U2 small nuclear ribonucleoprotein A yes no 2;3 4.006E-16 111.66 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 251640000 46636000 48923000 20995000 11179000 66007000 57903000 7687 814 7792 34465;34466;34467;34468;34469;34470;34471;34472;34473;34474;34475;34476 22763;22764;22765;22766;22767;22768;22769;22770;22771;22772;22773;22774 22767 12 TFNPGAGLPTDKKK KDIARRSKTFNPGAGL GLPTDKKKGGPSPGDV K T F K K G 1 0 1 1 0 0 0 2 0 0 1 3 0 1 2 0 2 0 0 0 0 14 2 1472.7987 P09661;H0YLR3;H0YMA0 P09661 180 193 SNRPA1 U2 small nuclear ribonucleoprotein A yes no 3 0.014249 57.434 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 10357000 0 2398300 1080700 601390 3789800 2487300 7688 814 7793 34477;34478;34479;34480;34481 22775;22776 22776 2 TFNRSSTLIQHQR YSCPDCGKTFNRSSTL STLIQHQRSHTGERPY K T F Q R S 0 2 1 0 0 2 0 0 1 1 1 0 0 1 0 2 2 0 0 0 0 13 1 1586.8277 H3BS42;Q9H5H4;B7Z2Y7 H3BS42 434 446 ZNF768 Zinc finger protein 768 yes no 3 3.6701E-05 95.417 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 5406600 0 805560 872700 0 1541000 2187300 7689 646 7794 34482;34483;34484;34485 22777;22778;22779 22778 3 TFQCELCSYTCPR IKKKGVKKTFQCELCS LCSYTCPRRSNLDRHM K T F P R R 0 1 0 0 3 1 1 0 0 0 1 0 0 1 1 1 2 0 1 0 0 13 0 1720.7007 P49711 P49711 265 277 CTCF Transcriptional repressor CTCF yes yes 2 0.040275 51.939 By matching By matching By matching By matching By matching By MS/MS 1 3699400 0 0 0 0 0 3699400 7690 940 7795 34486 22780 22780 0 TFQGHTNEVNAIK LGQDRPIKTFQGHTNE TNEVNAIKWDPTGNLL K T F I K W 1 0 2 0 0 1 1 1 1 1 0 1 0 1 0 0 2 0 0 1 0 13 0 1457.7263 B7Z475;Q9BZK7 B7Z475 206 218 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 no no 3 0.0063503 58.04 By matching By matching By matching By matching By matching By MS/MS 1 1048400 0 0 0 0 0 1048400 7691 185 7796 34487 22781 22781 1 TFQTLECQHK DISSLSEKTFQTLECQ QTLECQHKRSRRVRRS K T F H K R 0 0 0 0 1 2 1 0 1 0 1 1 0 1 0 0 2 0 0 0 0 10 0 1290.6027 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1712 1721 RIF1 Telomere-associated protein RIF1 yes no 2;3 7.4191E-09 113.18 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 1 1 2 3 43749000 5613100 8910800 4090100 2912100 6649200 15574000 7692 1201 7797 34488;34489;34490;34491;34492;34493;34494;34495;34496;34497;34498;34499;34500 22782;22783;22784;22785;22786;22787;22788;22789;22790;22791 22784 10 TFREWDFDLK ILNASNLKTFREWDFD REWDFDLKKLPNIKMR K T F L K K 0 1 0 2 0 0 1 0 0 0 1 1 0 2 0 0 1 1 0 0 0 10 1 1355.651 Q96EY4;H0Y9X1 Q96EY4 142 151 TMA16 Translation machinery-associated protein 16 yes no 3 0.011047 72.289 By matching By matching By matching By MS/MS By matching By matching 1 90367000 0 0 0 90367000 0 0 7693 615 7798 34501 22792;22793 22792 2 TFSEVLAEK SSSTIRIKTFSEVLAE FSEVLAEKKHRQQEAE K T F E K K 1 0 0 0 0 0 2 0 0 0 1 1 0 1 0 1 1 0 0 1 0 9 0 1022.5284 B4DLG2;O75152;E9PQ61;E9PBY7 B4DLG2 351 359 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 0.012404 81.525 By MS/MS By matching By MS/MS By matching By MS/MS By matching 2 1 1 1 2 2 44398000 9146500 4012500 5506400 5387900 3904300 16440000 7694 97 7799 34502;34503;34504;34505;34506;34507;34508;34509;34510 22794;22795;22796 22796 3 TFSGQTHGFVHRK CKVEYQIKTFSGQTHG THGFVHRKREDCSPAD K T F R K R 0 1 0 0 0 1 0 2 2 0 0 1 0 2 0 1 2 0 0 1 0 13 1 1500.7586 Q96DG6 Q96DG6 206 218 CMBL Carboxymethylenebutenolidase homolog yes yes 3 0.001155 69.229 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 5943600 0 0 1923400 804570 771140 2444500 7695 1377 7800 34511;34512;34513;34514 22797;22798 22797 2 TFSQSCSLLEHHK YECDDCGKTFSQSCSL CSLLEHHKIHTGEKPY K T F H K I 0 0 0 0 1 1 1 0 2 0 2 1 0 1 0 3 1 0 0 0 0 13 0 1572.7355 B7Z7H3;Q969J2;H7C1Y5;H7BY15 B7Z7H3 257 269 ZKSCAN4 Zinc finger protein with KRAB and SCAN domains 4 yes no 3 0.0061269 58.32 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 9658900 1077700 1680400 1370100 1415900 1291100 2823700 7696 194 7801 34515;34516;34517;34518;34519;34520 22799;22800;22801 22800 3 TFVRGGVVNAAK GSDGNKVKTFVRGGVV GGVVNAAKEEHETDEK K T F A K E 2 1 1 0 0 0 0 2 0 0 0 1 0 1 0 0 1 0 0 3 0 12 1 1217.6881 O15042-2;E7ET15;O15042;E7EW00;H0Y8D9;C9JDJ7;C9J5L1 O15042-2 134 145 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 3 4.369E-07 101.3 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 21316000 0 4459300 2984900 1421300 3416400 9034000 7697 378 7802 34521;34522;34523;34524;34525 22802;22803;22804;22805;22806 22806 5 TGAAPIIDVVR RVNAAKNKTGAAPIID APIIDVVRSGYYKVLG K T G V R S 2 1 0 1 0 0 0 1 0 2 0 0 0 0 1 0 1 0 0 2 0 11 0 1110.6397 E9PJD9;P46776;E9PLL6;E9PLX7 E9PJD9 38 48 RPL27A 60S ribosomal protein L27a yes no 2 0.013873 60.301 By matching By matching By matching By matching By MS/MS By matching 1 6776500 0 0 0 0 6776500 0 7698 447 7803 34526 22807 22807 1 TGALHSRLDL SYWDHDSKTGALHSRL ALHSRLDL________ K T G D L - 1 1 0 1 0 0 0 1 1 0 3 0 0 0 0 1 1 0 0 0 0 10 1 1081.588 P58012 P58012 367 376 FOXL2 Forkhead box protein L2 yes yes 2 1.5723E-23 128.51 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 1 1 1 1 1 103720000 15400000 14345000 26206000 7206900 9981500 30584000 7699 976 7804 34527;34528;34529;34530;34531;34532;34533 22808;22809;22810;22811;22812;22813 22810 5 TGAPQYGSYGTAPVNLNIK HVTIGDIKTGAPQYGS APVNLNIKTGGRVYGT K T G I K T 2 0 2 0 0 1 0 3 0 1 1 1 0 0 2 1 2 0 2 1 0 19 0 1949.9847 Q6UN15-4;Q6UN15-3;G3XAD6;Q6UN15 Q6UN15-4 90 108 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 yes no 2 1.0849E-38 112.44 By matching By MS/MS By matching By matching By matching By matching 1 7651400 0 7651400 0 0 0 0 7700 590 7805 34534 22814 22814 1 TGEEDEEEFFCNR LPDKIEVKTGEEDEEE EEEFFCNRAKLFRFDV K T G N R A 0 1 1 1 1 0 5 1 0 0 0 0 0 2 0 0 1 0 0 0 0 13 0 1660.6311 P49792 P49792 1186 1198 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 2 9.6753E-16 111.31 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 12602000 3789500 2000600 2552100 486200 1996600 1776900 7701 945 7806 34535;34536;34537;34538;34539;34540 22815;22816;22817;22818;22819;22820;22821 22821 7 TGEEDEEEFFCNRAK LPDKIEVKTGEEDEEE EFFCNRAKLFRFDVES K T G A K L 1 1 1 1 1 0 5 1 0 0 0 1 0 2 0 0 1 0 0 0 0 15 1 1859.7632 P49792 P49792 1186 1200 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 3 0.0027797 64.534 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 22139000 3728900 4888700 2477200 2388500 3471300 5184400 7702 945 7807 34541;34542;34543;34544;34545;34546 22822;22823;22824;22825;22826 22823 4 TGEEIFGTIGMRPNAK MEDYLTVKTGEEIFGT IGMRPNAKNNRDLDFT K T G A K N 1 1 1 0 0 0 2 3 0 2 0 1 1 1 1 0 2 0 0 0 0 16 1 1719.8614 E9PKG1;Q99873-3;Q99873-2;G5E9B6;Q99873;H7C2I1 E9PKG1 281 296 PRMT1 Protein arginine N-methyltransferase 1 yes no 3 0.00079235 73.415 By matching By matching By matching By matching By matching By MS/MS 1 5817500 0 0 0 0 0 5817500 7703 454 7808 34547 22827 22827 1 TGEEINFGK RHREQKEKTGEEINFG GEEINFGKLITKPSEG K T G G K L 0 0 1 0 0 0 2 2 0 1 0 1 0 1 0 0 1 0 0 0 0 9 0 993.47673 P49959-2;F8W7U8;P49959;B3KTC7 P49959-2 408 416 MRE11A Double-strand break repair protein MRE11A yes no 2 0.00079776 109.44 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 1 1 1 1 1 17862000 2486900 2189500 1679700 893410 3996800 6616000 7704 558 7809 34548;34549;34550;34551;34552;34553;34554 22828;22829;22830;22831;22832 22829 5 TGETVVEEMIATRK QNDSISGKTGETVVEE EEMIATRKVEQDSKET K T G R K V 1 1 0 0 0 0 3 1 0 1 0 1 1 0 0 0 3 0 0 2 0 14 1 1562.7974 Q92576-2;Q92576;E7EVH3;E9PE34;B3KP41;D6R9X2 Q92576-2 216 229 PHF3 PHD finger protein 3 yes no 3 1.3522E-104 147.52 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 90738000 0 30834000 12299000 0 5264600 42340000 7705 1353 7810 34555;34556;34557;34558 22833;22834;22835 22835 3 TGEVLHEVSNGSVVHRLCSDSCFSK TRCSICQKTGEVLHEV CSDSCFSKFRANKGLK K T G S K F 0 1 1 1 2 0 2 2 2 0 2 1 0 1 0 5 1 0 0 4 0 25 1 2803.3018 Q14202-2;Q14202-3;A6NL54;A6NHN7;Q14202;A6NHB5 Q14202-2 415 439 ZMYM3 Zinc finger MYM-type protein 3 yes no 4 5.7816E-47 100.14 By matching By matching By MS/MS By matching By matching By matching 1 11427000 0 0 11427000 0 0 0 7706 1102 7811 34559 22836 22836 0 TGGADQSLQQGEGSK KLKTRTQKTGGADQSL LQQGEGSKKGKGKKKK K T G S K K 1 0 0 1 0 3 1 4 0 0 1 1 0 0 0 2 1 0 0 0 0 15 0 1461.6696 P09132 P09132 122 136 SRP19 Signal recognition particle 19 kDa protein yes yes 2 0.00020189 87.138 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 2522100 0 976930 0 348020 525530 671630 7707 810 7812 34560;34561;34562;34563 22837;22838 22838 1 TGGTQTDLFTCGK IREHQMAKTGGTQTDL TDLFTCGKCKKKNCTY K T G G K C 0 0 0 1 1 1 0 3 0 0 1 1 0 1 0 0 4 0 0 0 0 13 0 1384.6293 P23193-2;P23193 P23193-2 232 244 TCEA1 Transcription elongation factor A protein 1 no no 2 1.5868E-46 127.02 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 14109000 1231200 2409800 2586700 2268800 938150 4673800 7708 864 7813 34564;34565;34566;34567;34568;34569 22839;22840;22841;22842;22843 22839 5 TGIHTCFVCK KFICNECRTGIHTCFV IHTCFVCKQSGEDVKR R T G C K Q 0 0 0 0 2 0 0 1 1 1 0 1 0 1 0 0 2 0 0 1 0 10 0 1221.5634 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 1319 1328 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 3 0.022311 58.699 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2198500 0 234950 395950 0 0 1567600 7709 1404 7814 34570;34571;34572 22844 22844 1 TGILEESMAR GQAVPASKTGILEESM ILEESMARRGSRKSMF K T G A R R 1 1 0 0 0 0 2 1 0 1 1 0 1 0 0 1 1 0 0 0 0 10 0 1105.5438 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 364 373 SYNPO Synaptopodin yes no 2 0.0088777 77.744 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 8621800 1037200 1609600 1970100 547460 0 3457500 7710 1297 7815 34573;34574;34575;34576;34577 22845 22845 1 TGISDVFAK NKSAPELKTGISDVFA GISDVFAKNDLAVVDV K T G A K N 1 0 0 1 0 0 0 1 0 1 0 1 0 1 0 1 1 0 0 1 0 9 0 936.49165 E7EX81;P19338 E7EX81 217 225 NCL Nucleolin yes no 2 0.014268 78.264 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 3575600 2005500 0 0 0 0 1570100 7711 397 7816 34578;34579 22846;22847 22846 2 TGISEEAAIEENK FHGQERTKTGISEEAA EAAIEENKRNDDSEAD K T G N K R 2 0 1 0 0 0 4 1 0 2 0 1 0 0 0 1 1 0 0 0 0 13 0 1389.6624 Q5UIP0-2;Q5UIP0;H7C2B5 Q5UIP0-2 1935 1947 RIF1 Telomere-associated protein RIF1 yes no 2 0.006464 59.248 By matching By matching By matching By matching By matching By MS/MS 1 1741100 0 0 0 0 0 1741100 7712 1201 7817 34580 22848 22848 1 TGISEEAAIEENKRNDDSEADTAK FHGQERTKTGISEEAA DSEADTAKLNAKEVAT K T G A K L 4 1 2 3 0 0 5 1 0 2 0 2 0 0 0 2 2 0 0 0 0 24 2 2592.1787 Q5UIP0-2;Q5UIP0;H7C2B5 Q5UIP0-2 1935 1958 RIF1 Telomere-associated protein RIF1 yes no 4 0.016642 34.219 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 14700000 2018600 3332500 1753300 1257900 1988100 4349700 7713 1201 7818 34581;34582;34583;34584;34585;34586 22849;22850 22850 2 TGKPEEASLDSR APGPSKVKTGKPEEAS EEASLDSREKKTNLAP K T G S R E 1 1 0 1 0 0 2 1 0 0 1 1 0 0 1 2 1 0 0 0 0 12 1 1288.6259 Q9BY42;A8MSH5;A2A2L5 Q9BY42 225 236 RTFDC1 Protein RTF2 homolog yes no 3 2.201E-50 133.88 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 45578000 4454200 10810000 11413000 2644000 4577500 11679000 7714 38 7819 34587;34588;34589;34590;34591;34592 22851;22852;22853;22854;22855 22851 5 TGKPEEASLDSREK APGPSKVKTGKPEEAS ASLDSREKKTNLAPKS K T G E K K 1 1 0 1 0 0 3 1 0 0 1 2 0 0 1 2 1 0 0 0 0 14 2 1545.7635 Q9BY42;A8MSH5;A2A2L5 Q9BY42 225 238 RTFDC1 Protein RTF2 homolog yes no 3 7.2691E-55 128.85 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 23460000 2379900 2645000 9067300 4277000 1740100 3350400 7715 38 7820 34593;34594;34595;34596;34597;34598 22856;22857;22858;22859 22859 4 TGLAVTVGQAK ESDSEEEKTGLAVTVG AVTVGQAKSVGKGLQV K T G A K S 2 0 0 0 0 1 0 2 0 0 1 1 0 0 0 0 2 0 0 2 0 11 0 1043.5975 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 706 716 TCOF1 Treacle protein no no 2 0.012931 61.419 By MS/MS By MS/MS By matching By matching By matching By MS/MS 2 1 1 2 1 1 191540000 49127000 17300000 14305000 18723000 62835000 29253000 7716 1082;383 7821 34599;34600;34601;34602;34603;34604;34605;34606 22860;22861;22862;22863 22863 4 TGMYYLR YGWKQGLKTGMYYLRT KTGMYYLRTRPAANPI K T G L R T 0 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 1 0 2 0 0 7 0 902.43202 P23921;H0YFI0;E9PD78;E9PL69;F5H861 P23921 734 740 RRM1 Ribonucleoside-diphosphate reductase large subunit;Ribonucleoside-diphosphate reductase yes no 2 0.0011071 114.02 By matching By matching By matching By matching By MS/MS By matching 1 1 4527600 0 1142300 0 0 3385300 0 7717 870 7822 34607;34608 22864 22864 1 TGNGQTYRGTTAETK RIYLLECKTGNGQTYR RGTTAETKSGVTCQKW K T G T K S 1 1 1 0 0 1 1 3 0 0 0 1 0 0 0 0 5 0 1 0 0 15 1 1583.754 CON__P06868 CON__P06868 112 126 yes yes 3 0.0033053 57.267 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2673100 0 784550 1726700 161860 0 0 + 7718 295 7823 34609;34610;34611 22865 22865 1 TGPAAAQVQVGK AAPAPPRKTGPAAAQV AAQVQVGKQEEDSRSS K T G G K Q 3 0 0 0 0 2 0 2 0 0 0 1 0 0 1 0 1 0 0 2 0 12 0 1125.6142 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 459 470 TCOF1 Treacle protein no no 2 4.9399E-27 123.67 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 8117400 1366200 0 557940 609030 2870700 2713600 7719 1082;383 7824 34612;34613;34614;34615;34616 22866;22867;22868;22869;22870 22869 5 TGPTVTQVK TAPVLPGKTGPTVTQV GPTVTQVKAEKQEDSE K T G V K A 0 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 3 0 0 2 0 9 0 929.5182 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 747 755 TCOF1 Treacle protein no no 2 0.010101 100.25 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 6802400 0 2621500 2064300 0 943640 1173000 7720 1082;383 7825 34617;34618;34619;34620 22871;22872;22873;22874 22873 4 TGRDTPENGETAIGAENSEK STSRSSSKTGRDTPEN IGAENSEKIDENSDKE K T G E K I 2 1 2 1 0 0 4 3 0 1 0 1 0 0 1 1 3 0 0 0 0 20 1 2074.9403 Q8N3X1;Q8N3X1-2 Q8N3X1 475 494 FNBP4 Formin-binding protein 4 yes no 3 0.021912 36.454 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 5362600 371400 992820 1008700 738270 1384200 867190 7721 1298 7826 34621;34622;34623;34624;34625;34626 22875 22875 1 TGRVYNVTQHAVGIVVNK PHKCYHGKTGRVYNVT AVGIVVNKQGQDSCQE K T G N K Q 1 1 2 0 0 1 0 2 1 1 0 1 0 0 0 0 2 0 1 5 0 18 1 1954.0748 G3V1B3;P46778 G3V1B3 61 78 RPL21 60S ribosomal protein L21 yes no 3;4 0.0012285 75.911 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 2 2 1 2 1 28182000 4425000 0 6948800 1767600 12260000 2780300 7722 574 7827 34627;34628;34629;34630;34631;34632;34633;34634 22876;22877;22878;22879;22880;22881;22882 22882 7 TGSGLNSFYDQR HWAECLQKTGSGLNSF LNSFYDQREYIGRSVH K T G Q R E 0 1 1 1 0 1 0 2 0 0 1 0 0 1 0 2 1 0 1 0 0 12 0 1343.6106 P49792;E9PGT0 P49792 585 596 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 2 8.7926E-05 98.942 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 15724000 1136600 1422100 0 1658900 4963500 6542500 7723 945 7828 34635;34636;34637;34638;34639;34640 22883;22884;22885;22886 22884 4 TGSGLNSFYDQREYIGR HWAECLQKTGSGLNSF DQREYIGRSVHYWKKV K T G G R S 0 2 1 1 0 1 1 3 0 1 1 0 0 1 0 2 1 0 2 0 0 17 1 1961.9232 P49792;E9PGT0 P49792 585 601 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 3 0.0018107 60.937 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 29452000 0 0 12761000 9996500 6695400 0 7724 945 7829 34641;34642;34643 22887;22888 22888 2 TGSLQLICK NTRSSRSKTGSLQLIC GSLQLICKSEPNTDQL K T G C K S 0 0 0 0 1 1 0 1 0 1 2 1 0 0 0 1 1 0 0 0 0 9 0 1018.5481 Q96JP5-2;H9KV86;Q96JP5;H3BTR0 Q96JP5-2 175 183 ZFP91;ZFP91-CNTF E3 ubiquitin-protein ligase ZFP91 yes no 2 1.001E-54 145.9 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 31315000 2611000 5173400 6813100 3401000 3851200 9465000 7725 677 7830 34644;34645;34646;34647;34648;34649 22889;22890;22891;22892;22893;22894 22892 6 TGSNEFKLNQPPEDGISSVK ________________ EDGISSVKFSPNTSQF M T G V K F 0 0 2 1 0 1 2 2 0 1 1 2 0 1 2 3 1 0 0 1 0 20 1 2146.0542 O43684-2;O43684 O43684-2 2 21 BUB3 Mitotic checkpoint protein BUB3 yes no 2;3 0 221.51 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 3 3 364340000 49436000 0 92401000 20103000 30218000 172180000 7726 719 7831;7832 34650;34651;34652;34653;34654;34655;34656;34657;34658;34659 22895;22896;22897;22898;22899;22900;22901;22902;22903;22904;22905 22898 11 TGSPGPELLFHEGQQK CGAYIYTKTGSPGPEL LFHEGQQKRFCNTTCL K T G Q K R 0 0 0 0 0 2 2 3 1 0 2 1 0 1 2 1 1 0 0 0 0 16 0 1723.8529 Q14202-2;Q14202-3;A6NL54;A6NHN7;Q14202;A6NHB5 Q14202-2 462 477 ZMYM3 Zinc finger MYM-type protein 3 yes no 3 0.00071343 73.722 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 29317000 19309000 0 10008000 0 0 0 7727 1102 7833 34660;34661 22906;22907 22907 2 TGSSSLPGRPSVIPDHSK SPEGLISRTGSSSLPG SVIPDHSKKNIGNGII R T G S K K 0 1 0 1 0 0 0 2 1 1 1 1 0 0 3 5 1 0 0 1 0 18 1 1820.9381 Q9P275;Q9P275-2;E9PEW0;F5H3B9 Q9P275 437 454 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 3;4 0.00090474 79.317 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 1 2 2 69905000 11244000 8275500 5843600 3449300 21233000 19860000 7728 1576 7834 34662;34663;34664;34665;34666;34667;34668;34669;34670;34671 22908;22909;22910;22911;22912;22913;22914;22915;22916;22917;22918 22915 11 TGSTQLFCSTR KGQTAYHKTGSTQLFC TQLFCSTRCITRHSSP K T G T R C 0 1 0 0 1 1 0 1 0 0 1 0 0 1 0 2 3 0 0 0 0 11 0 1256.5819 O95789-1;O95789;O95789-2;O95789-4 O95789-1 109 119 ZMYM6 Zinc finger MYM-type protein 6 yes no 2 0.017964 57.175 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1918800 0 0 467580 0 661990 789190 7729 775 7835 34672;34673;34674 22919;22920 22920 1 TGTDSNSTESSETSTGSLCK AKQTLKDKTGTDSNST TSTGSLCKESFSGQVS K T G C K E 0 0 1 1 1 0 2 2 0 0 1 1 0 0 0 6 5 0 0 0 0 20 0 2047.8488 Q8N3X1;Q8N3X1-2 Q8N3X1 655 674 FNBP4 Formin-binding protein 4 yes no 2 0.00011528 69.081 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 1 7226700 968720 1529700 1576900 748550 0 2402800 7730 1298 7836 34675;34676;34677;34678;34679 22921;22922;22923 22923 3 TGTITTFEHAHNMR GVDQFLVKTGTITTFE FEHAHNMRVMKFSVSP K T G M R V 1 1 1 0 0 0 1 1 2 1 0 0 1 1 0 0 4 0 0 0 0 14 0 1614.7573 P13639;F5H370 P13639 482 495 EEF2 Elongation factor 2 yes no 3 0.0048585 55.291 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 5438200 0 490390 755940 521950 1155800 2514100 7731 833 7837 34680;34681;34682;34683;34684 22924 22924 1 TGTLGSLEEPAGGASVSAGSR SVDRGKRKTGTLGSLE ASVSAGSRAVGVAGVA K T G S R A 3 1 0 0 0 0 2 5 0 0 2 0 0 0 1 4 2 0 0 1 0 21 0 1902.9283 P78524 P78524 317 337 ST5 Suppression of tumorigenicity 5 protein yes yes 2 0.0054564 44.743 By MS/MS By matching By matching By matching By matching By matching 1 1 2161500 1129600 0 0 0 0 1031900 7732 1011 7838 34685;34686 22925 22925 1 TGTLQPWNSDSTLNSR YWTRSRRKTGTLQPWN SDSTLNSRQLEPRTET K T G S R Q 0 1 2 1 0 1 0 1 0 0 2 0 0 0 1 3 3 1 0 0 0 16 0 1775.8438 Q9H0H5;F8VRD2;H0YIK5 Q9H0H5 249 264 RACGAP1 Rac GTPase-activating protein 1 yes no 2 7.1917E-12 99.747 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 52595000 0 5061400 14149000 1004100 3419800 28961000 7733 1479 7839 34687;34688;34689;34690;34691 22926;22927;22928;22929 22927 4 TGTLQPWNSDSTLNSRQLEPR YWTRSRRKTGTLQPWN NSRQLEPRTETDSVGT K T G P R T 0 2 2 1 0 2 1 1 0 0 3 0 0 0 2 3 3 1 0 0 0 21 1 2399.1829 Q9H0H5;F8VRD2;H0YIK5 Q9H0H5 249 269 RACGAP1 Rac GTPase-activating protein 1 yes no 3 8.6224E-15 90.872 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 65809000 38712000 27096000 0 0 0 0 7734 1479 7840 34692;34693 22930;22931 22930 2 TGTSCALDCGAGIGRITK FLREGPNKTGTSCALD AGIGRITKRLLLPLFR K T G T K R 2 1 0 1 2 0 0 4 0 2 1 1 0 0 0 1 3 0 0 0 0 18 1 1836.8822 Q9BV86-2;Q9BV86 Q9BV86-2 60 77 NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1;N-terminal Xaa-Pro-Lys N-methyltransferase 1, N-terminally processed yes no 3 0.000894 79.92 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 17008000 1836500 2062900 3446900 1293000 2143700 6224600 7735 1453 7841 34694;34695;34696;34697;34698;34699 22932;22933;22934 22932 2 TGTYRQLFHPEQLITGK PTVIDEVRTGTYRQLF PEQLITGKEDAANNYA R T G G K E 0 1 0 0 0 2 1 2 1 1 2 1 0 1 1 0 3 0 1 0 0 17 1 1988.048 G3V1U9;Q9BQE3;Q71U36;P68363;F5H5D3;Q6PEY2;Q13748;E9PGK3;Q13748-2;F8VVB9;F8VQQ4;F8VX09;F8VWV9;F8VRZ4;F8VS66 G3V1U9 45 61 TUBA1A;TUBA1C;TUBA1B;TUBA3E;TUBA3C Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain yes no 3 0.016497 40.693 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 29839000 0 15996000 13843000 0 0 0 7736 518 7842 34700;34701 22935;22936 22935 2 TGVFRNQVDSETHCHAER RRSVVSWKTGVFRNQV ETHCHAERCFLSWFCD K T G E R C 1 2 1 1 1 1 2 1 2 0 0 0 0 1 0 1 2 0 0 2 0 18 1 2141.9661 Q9NRW3 Q9NRW3 52 69 APOBEC3C DNA dC->dU-editing enzyme APOBEC-3C yes yes 3;4;5 1.8643E-08 93.427 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 1 2 3 520860000 5658000 88215000 31047000 5267600 29918000 360750000 7737 1537 7843 34702;34703;34704;34705;34706;34707;34708;34709;34710;34711;34712 22937;22938;22939;22940;22941;22942;22943;22944;22945 22943 9 TGVHHYSGNNIELGTACGK EYYAMLAKTGVHHYSG ELGTACGKYYRVCTLA K T G G K Y 1 0 2 0 1 0 1 4 2 1 1 1 0 0 0 1 2 0 1 1 0 19 0 2013.9327 E5RI99;P62888 E5RI99 69 87 RPL30 60S ribosomal protein L30 yes no 2;3;4 2.0747E-83 130.87 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 9 4 3 3 7 5 7060400000 2265500000 313510000 226590000 2011500000 1835300000 408040000 7738 342 7844 34713;34714;34715;34716;34717;34718;34719;34720;34721;34722;34723;34724;34725;34726;34727;34728;34729;34730;34731;34732;34733;34734;34735;34736;34737;34738;34739;34740;34741;34742;34743 22946;22947;22948;22949;22950;22951;22952;22953;22954;22955;22956;22957;22958;22959;22960;22961;22962;22963;22964;22965;22966;22967;22968;22969;22970;22971;22972 22971 26 TGVHHYSGNNIELGTACGKYYR EYYAMLAKTGVHHYSG TACGKYYRVCTLAIID K T G Y R V 1 1 2 0 1 0 1 4 2 1 1 1 0 0 0 1 2 0 3 1 0 22 1 2496.1604 E5RI99;P62888 E5RI99 69 90 RPL30 60S ribosomal protein L30 yes no 4 4.9343E-06 63.447 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 16069000 6863900 0 0 5358400 3846600 0 7739 342 7845 34744;34745;34746 22973;22974;22975;22976 22974 4 TGYGGGFNERENVEYIER KYAKLEERTGYGGGFN ENVEYIEREESDGEYD R T G E R E 0 2 2 0 0 0 4 4 0 1 0 0 0 1 0 0 1 0 2 1 0 18 1 2088.9501 O95218-2;O95218 O95218-2 100 117 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 yes no 3 0.011072 41.359 By matching By matching By matching By matching By MS/MS By matching 1 8160900 0 0 0 0 8160900 0 7740 765 7846 34747 22977 22977 1 TGYTLDVTTGQRK KIKALLERTGYTLDVT DVTTGQRKYGGPPPDS R T G R K Y 0 1 0 1 0 1 0 2 0 0 1 1 0 0 0 0 4 0 1 1 0 13 1 1438.7416 O43390;O43390-2;E7ETM7;F6UXX1;O60506-2;O60506;O60506-4;O60506-3 O60506-2 131 143 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q no no 3 0.0096764 49.356 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 16806000 1149900 4755000 1462300 1283400 3667400 4487600 7741 731;715 7847 34748;34749;34750;34751;34752;34753 22978;22979;22980;22981 22980 4 THAVLVALK ATVGLKSKTHAVLVAL HAVLVALKRAQSELAA K T H L K R 2 0 0 0 0 0 0 0 1 0 2 1 0 0 0 0 1 0 0 2 0 9 0 950.5913 P25786;P25786-2;F5GX11;B4DEV8 P25786 42 50 PSMA1 Proteasome subunit alpha type-1;Proteasome subunit alpha type yes no 2 0.0064563 91.867 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 15506000 1321100 2237600 2760500 1437200 2419000 5330500 7742 876 7848 34754;34755;34756;34757;34758;34759 22982;22983;22984;22985;22986;22987 22984 6 THEDIEAQIR ________________ EDIEAQIREIQGKKAA K T H I R E 1 1 0 1 0 1 2 0 1 2 0 0 0 0 0 0 1 0 0 0 0 10 0 1210.5942 O75533;F8WC19;E9PCH3;B4DGZ4 O75533 7 16 SF3B1 Splicing factor 3B subunit 1 yes no 2;3 0.0031326 91.549 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 1 2 2 14742000 1587000 3797900 1380300 446310 3126400 4404200 7743 746 7849 34760;34761;34762;34763;34764;34765;34766;34767;34768;34769;34770 22988;22989;22990;22991;22992 22989 5 THEDIEAQIREIQGK ________________ QIREIQGKKAALDEAQ K T H G K K 1 1 0 1 0 2 3 1 1 3 0 1 0 0 0 0 1 0 0 0 0 15 1 1765.8959 O75533;F8WC19;E9PCH3;B4DGZ4 O75533 7 21 SF3B1 Splicing factor 3B subunit 1 yes no 3 2.6406E-229 175.29 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 41545000 21990000 2993800 9835800 1580500 1199000 3946700 7744 746 7850 34771;34772;34773;34774;34775;34776 22993;22994;22995 22995 2 THEMEPAEAIETPLLPHQK EDLKEDDKTHEMEPAE TPLLPHQKQALAWMVS K T H Q K Q 2 0 0 0 0 1 4 0 2 1 2 1 1 0 3 0 2 0 0 0 0 19 0 2170.0729 Q14527;Q14527-2;E7ESN4;F5H3D6 Q14527 227 245 HLTF Helicase-like transcription factor yes no 4 0.00099653 57.197 By matching By MS/MS By matching By matching By matching By matching 1 5240400 0 5240400 0 0 0 0 7745 1107 7851 34777 22996 22996 0 THHNDTELIRK SGKAELIKTHHNDTEL NDTELIRKLREEGKVI K T H R K L 0 1 1 1 0 0 1 0 2 1 1 1 0 0 0 0 2 0 0 0 0 11 1 1362.7004 F8W720;B4DUT7;P49915 F8W720 291 301 GMPS GMP synthase [glutamine-hydrolyzing] yes no 3 0.023536 46.796 By matching By MS/MS By matching By matching By matching By matching 1 444070 0 444070 0 0 0 0 7746 129 7852 34778 22997 22997 1 THINIVVIGHVDSGK ________________ IGHVDSGKSTTTGHLI K T H G K S 0 0 1 1 0 0 0 2 2 3 0 1 0 0 0 1 1 0 0 3 0 15 0 1587.8733 Q5VTE0;P68104;Q6IQ15;F8W6I0;Q05639;A6PW80;Q5JR01;E7EPH7 Q5VTE0 6 20 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 yes no 2;3 2.8523E-70 132.15 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 17 7 14 3 8 499790000 116360000 179370000 68943000 58542000 39641000 36939000 7747 1006 7853 34779;34780;34781;34782;34783;34784;34785;34786;34787;34788;34789;34790;34791;34792;34793;34794;34795;34796;34797;34798;34799;34800;34801;34802;34803;34804;34805;34806;34807;34808;34809;34810;34811;34812;34813;34814;34815;34816;34817;34818;34819;34820;34821;34822;34823;34824;34825;34826;34827;34828;34829;34830;34831;34832 22998;22999;23000;23001;23002;23003;23004;23005;23006;23007;23008;23009;23010;23011;23012;23013;23014;23015;23016;23017;23018;23019;23020;23021;23022;23023;23024;23025;23026;23027;23028;23029;23030;23031;23032 22999 32 THLPGRTYSCPDCGK SVLAIHARTHLPGRTY YSCPDCGKTFNRSSTL R T H G K T 0 1 0 1 2 0 0 2 1 0 1 1 0 0 2 1 2 0 1 0 0 15 1 1747.777 H3BS42;Q9H5H4;B7Z2Y7 H3BS42 419 433 ZNF768 Zinc finger protein 768 yes no 3;4 0.0085816 62.287 By MS/MS By matching By matching By matching By MS/MS By MS/MS 3 1 2 2 1 15230000 2932500 2246300 2573300 0 3263700 4214500 7748 646 7854 34833;34834;34835;34836;34837;34838;34839;34840;34841 23033;23034;23035;23036 23034 2 THLSLSHQPDK NLPICMAKTHLSLSHQ SLSHQPDKKGVPRDFI K T H D K K 0 0 0 1 0 1 0 0 2 0 2 1 0 0 1 2 1 0 0 0 0 11 0 1261.6415 Q6UB35;Q4VXM1;Q4VXM0 Q6UB35 910 920 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes no 3 0.01646 55.98 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 2013000 0 608510 688210 292790 0 423520 7749 1235 7855 34842;34843;34844;34845 23037 23037 1 THQIRAALAPAK AQVKPSGKTHQIRAAL RAALAPAKESPRKGAA K T H A K E 4 1 0 0 0 1 0 0 1 1 1 1 0 0 1 0 1 0 0 0 0 12 1 1275.7412 Q13428-7;E7ETY2;Q13428-6;Q13428-5;H0YAB7;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 893 904 TCOF1 Treacle protein no no 3 0.0014667 91.123 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 17556000 892750 5068900 2332000 2629300 4374100 2258500 7750 1082;383 7856 34846;34847;34848;34849;34850;34851 23038;23039;23040;23041;23042 23039 5 THRGEQPPRPVVPR SARIKHQRTHRGEQPP PPRPVVPRRQPSRAAT R T H P R R 0 3 0 0 0 1 1 1 1 0 0 0 0 0 4 0 1 0 0 2 0 14 2 1624.891 Q96MX3 Q96MX3 241 254 ZNF48 Zinc finger protein 48 yes yes 4 0.022721 43.03 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3091400 0 0 0 609250 962300 1519900 7751 1408 7857 34852;34853;34854 23043 23043 1 THSGEKPFLCPR SSYQSHERTHSGEKPF EKPFLCPRCGRMFSDP R T H P R C 0 1 0 0 1 0 1 1 1 0 1 1 0 1 2 1 1 0 0 0 0 12 1 1427.698 Q96K58;C9JHH8 Q96K58 273 284 ZNF668 Zinc finger protein 668 yes no 3 0.022061 51.252 By matching By matching By matching By matching By matching By MS/MS 1 917740 0 0 0 0 0 917740 7752 1401 7858 34855 23044 23044 1 THSVPATPTSTPVPNPEAESSSK LTKEDLFKTHSVPATP PEAESSSKEGELDARD K T H S K E 2 0 1 0 0 0 2 0 1 0 0 1 0 0 5 5 4 0 0 2 0 23 0 2320.1183 Q96FF9;B5MBX0 Q96FF9 105 127 CDCA5 Sororin yes no 3 3.2744E-10 79.029 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 28128000 10657000 2464300 1677100 3214100 6058800 4056400 7753 169 7859 34856;34857;34858;34859;34860;34861 23045;23046;23047;23048 23048 3 THTGEKPYECTHCGK SNLLKHQKTHTGEKPY YECTHCGKAFAYSSCL K T H G K A 0 0 0 0 2 0 2 2 2 0 0 2 0 0 1 0 3 0 1 0 0 15 1 1803.7669 Q8N8Y5 Q8N8Y5 164 178 ZFP41 Zinc finger protein 41 homolog yes yes 3;4 0.032077 39.629 By matching By MS/MS By MS/MS By MS/MS By matching By matching 2 1 1 2051100 0 991200 667500 392440 0 0 7754 1309 7860 34862;34863;34864;34865 23049;23050;23051 23051 3 THTGERPFACDWQGCDKK SHLKSHLRTHTGERPF DWQGCDKKFARSDELA R T H K K F 1 1 0 2 2 1 1 2 1 0 0 2 0 1 1 0 2 1 0 0 0 18 2 2191.9528 Q9BXK1 Q9BXK1 150 167 KLF16 Krueppel-like factor 16 yes yes 4 0.003755 47.916 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3290900 0 0 916520 0 736200 1638200 7755 1462 7861 34866;34867;34868 23052 23052 1 THTGERPYKCPECGK ATLLRHQRTHTGERPY YKCPECGKSFSVSSNL R T H G K S 0 1 0 0 2 0 2 2 1 0 0 2 0 0 2 0 2 0 1 0 0 15 2 1818.8141 Q9UEG4 Q9UEG4 395 409 ZNF629 Zinc finger protein 629 yes yes 4 0.017686 42.682 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 4929800 582230 636590 802980 604900 854620 1448500 7756 1586 7862 34869;34870;34871;34872;34873;34874 23053 23053 1 THTITIESEGK IDQILLRRTHTITIES ITIESEGKGSTFAKAS R T H G K G 0 0 0 0 0 0 2 1 1 2 0 1 0 0 0 1 3 0 0 0 0 11 0 1214.6143 Q9P2D1 Q9P2D1 1495 1505 CHD7 Chromodomain-helicase-DNA-binding protein 7 yes yes 3 0.0034521 78.513 By matching By matching By matching By matching By matching By MS/MS 1 1363800 0 0 0 0 0 1363800 7757 1578 7863 34875 23054 23054 1 THTMGGDFSGKNQDCSK YGQTGSGKTHTMGGDF GKNQDCSKGIYALAAR K T H S K G 0 0 1 2 1 1 0 3 1 0 0 2 1 1 0 2 2 0 0 0 0 17 1 1868.7781 O00139-1;E9PB70;O00139;O00139-4;O00139-2 O00139-2 293 309 KIF2A Kinesin-like protein KIF2A no no 4 0.033107 37.352 By matching By matching By matching By matching By matching By MS/MS 1 809830 0 0 0 0 0 809830 7758 403;686 7864 34876 23055 23055 1 THTMLGSPEQPGVIPR YGPTGAGKTHTMLGSP EQPGVIPRALMDLLQL K T H P R A 0 1 0 0 0 1 1 2 1 1 1 0 1 0 3 1 2 0 0 1 0 16 0 1718.8774 Q14807;B7Z265;H3BRB3;H3BTH5 Q14807 134 149 KIF22 Kinesin-like protein KIF22 yes no 2;3 0.0004229 82.483 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 2 1 2 3 32718000 7488500 3952000 4001200 0 1818400 15458000 7759 1115 7865;7866 34877;34878;34879;34880;34881;34882;34883;34884;34885;34886 23056;23057;23058;23059;23060;23061 23061 138 6 THTMTGSPGEGGLLPR YGVTGSGKTHTMTGSP GEGGLLPRCLDMIFNS K T H P R C 0 1 0 0 0 0 1 4 1 0 2 0 1 0 2 1 3 0 0 0 0 16 0 1609.7882 Q02241-2;H7BYN4;Q02241;H0YME6 Q02241-2 119 134 KIF23 Kinesin-like protein KIF23 yes no 3 0.0025442 63.212 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 7353900 0 1443800 1418800 0 660420 3830800 7760 660 7867 34887;34888;34889;34890 23062 23062 1 TIAATPIQTLPQSQSTPK SQPATPTRTIAATPIQ PQSQSTPKRIDTPSLE R T I P K R 2 0 0 0 0 3 0 0 0 2 1 1 0 0 3 2 4 0 0 0 0 18 0 1881.0207 H0YLB5;P14859-4;P14859-5;P14859-3;P14859;P14859-2 H0YLB5 278 295 POU2F1 POU domain, class 2, transcription factor 1 yes no 2 9.4809E-22 101.9 By matching By matching By matching By matching By matching By MS/MS 1 3398900 0 0 0 0 0 3398900 7761 627 7868 34891 23063 23063 1 TIAECLADELINAAK EAAFRNIKTIAECLAD DELINAAKGSSNSYAI K T I A K G 4 0 1 1 1 0 2 0 0 2 2 1 0 0 0 0 1 0 0 0 0 15 0 1630.8236 P46782 P46782 168 182 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes yes 2 0.015705 77.746 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 7762 927 7869 34892 23064 23064 1 TIAEQLAEK LAPTVSAKTIAEQLAE IAEQLAEKINAKLNYV K T I E K I 2 0 0 0 0 1 2 0 0 1 1 1 0 0 0 0 1 0 0 0 0 9 0 1001.5393 Q7L014 Q7L014 895 903 DDX46 Probable ATP-dependent RNA helicase DDX46 yes yes 2 0.0043552 105.2 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 7309800 1251300 1844700 557320 0 1414300 2242100 7763 1243 7870 34893;34894;34895;34896;34897 23065 23065 1 TIAPQNAPR PSRRSPAKTIAPQNAP IAPQNAPRDESRGRSS K T I P R D 2 1 1 0 0 1 0 0 0 1 0 0 0 0 2 0 1 0 0 0 0 9 0 966.52468 Q9NYF8-2;Q9NYF8;Q9NYF8-4;E9PK09;E9PQN2;E9PKI6;E9PJA7;H0YF00;Q9NYF8-3;E9PK91 Q9NYF8-2 302 310 BCLAF1 Bcl-2-associated transcription factor 1 no no 2 0.0061789 104.06 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 32112000 3239300 4472200 7014700 3105900 5633400 8646800 7764 1563;452 7871 34898;34899;34900;34901;34902;34903 23066;23067;23068;23069;23070 23066 5 TIAPQNAPRDESR PSRRSPAKTIAPQNAP NAPRDESRGRSSFYPD K T I S R G 2 2 1 1 0 1 1 0 0 1 0 0 0 0 2 1 1 0 0 0 0 13 1 1453.7274 Q9NYF8-2;Q9NYF8;Q9NYF8-4;E9PK09;E9PQN2;E9PKI6;E9PJA7;H0YF00;Q9NYF8-3;E9PK91 Q9NYF8-2 302 314 BCLAF1 Bcl-2-associated transcription factor 1 no no 2;3 0.01906 58.32 By MS/MS By matching By MS/MS By matching By MS/MS By matching 3 2 2 2 2 2 75319000 13703000 6402600 11615000 11671000 13794000 18133000 7765 1563;452 7872 34904;34905;34906;34907;34908;34909;34910;34911;34912;34913;34914;34915;34916 23071;23072;23073 23072 3 TIAQDYGVLK PLVSDPKRTIAQDYGV AQDYGVLKADEGISFR R T I L K A 1 0 0 1 0 1 0 1 0 1 1 1 0 0 0 0 1 0 1 1 0 10 0 1106.5972 Q06830 Q06830 111 120 PRDX1 Peroxiredoxin-1 yes yes 2 0.010239 73.841 By matching By MS/MS By matching By matching By matching By matching 1 1 1 16125000 0 4156800 0 2951200 0 9016900 7766 1044 7873 34917;34918;34919 23074 23074 1 TIDVFDGNSGK SCTPYELRTIDVFDGN VFDGNSGKMMCQLYDP R T I G K M 0 0 1 2 0 0 0 2 0 1 0 1 0 1 0 1 1 0 0 1 0 11 0 1151.5459 Q92466-2;Q92466-4;Q92466 Q92466-2 182 192 DDB2 DNA damage-binding protein 2 yes no 2 2.7392E-05 103.43 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 14600000 566030 3438200 2607700 646880 2419100 4921700 7767 1347 7874 34920;34921;34922;34923;34924;34925 23075;23076;23077;23078;23079;23080;23081;23082 23081 7 TIEYLQPNPASR AVTEVLARTIEYLQPN LQPNPASRAKLTMLNT R T I S R A 1 1 1 0 0 1 1 0 0 1 1 0 0 0 2 1 1 0 1 0 0 12 0 1387.7096 Q99961;F5H5J3;Q99962 Q99961 54 65 SH3GL1;SH3GL2 Endophilin-A2;Endophilin-A1 yes no 2 0.0056833 63.662 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 5801700 0 0 789390 0 1807000 3205200 7768 1435 7875 34926;34927;34928 23083;23084 23084 2 TIFFKDDGNYK PEGYVQERTIFFKDDG FKDDGNYKTRAEVKFE R T I Y K T 0 0 1 2 0 0 0 1 0 1 0 2 0 2 0 0 1 0 1 0 0 11 1 1346.6507 CON__Q9U6Y5 CON__Q9U6Y5 97 107 yes yes 3 0.012541 62.166 By matching By MS/MS By matching By matching By matching By matching 1 1648300 0 1648300 0 0 0 0 + 7769 310 7876 34929 23085 23085 1 TIFFKDDGNYKTR PEGYVQERTIFFKDDG DDGNYKTRAEVKFEGD R T I T R A 0 1 1 2 0 0 0 1 0 1 0 2 0 2 0 0 2 0 1 0 0 13 2 1603.7995 CON__Q9U6Y5 CON__Q9U6Y5 97 109 yes yes 4 0.017948 48.532 By matching By matching By matching By matching By matching By MS/MS 1 1 2153500 0 0 1586400 0 0 567060 + 7770 310 7877 34930;34931 23086 23086 1 TIFVLTK QMDPHGRRTIFVLTKV RTIFVLTKVDLAEKNV R T I T K V 0 0 0 0 0 0 0 0 0 1 1 1 0 1 0 0 2 0 0 1 0 7 0 820.50584 O60313;E5KLK1;E5KLJ6;E5KLJ9;O60313-2;E5KLJ5 O60313 462 468 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 2 6.1497E-21 132.57 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 13076000 0 0 0 0 3012200 10064000 7771 336 7878 34932;34933 23087;23088 23087 2 TIGVKHPELCK SELLQRLKTIGVKHPE VKHPELCKALVKEKLR K T I C K A 0 0 0 0 1 0 1 1 1 1 1 2 0 0 1 0 1 0 0 1 0 11 1 1280.6911 Q8N2W9 Q8N2W9 290 300 PIAS4 E3 SUMO-protein ligase PIAS4 yes yes 3 0.0059731 70.942 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 11622000 0 1239200 1729000 498800 1742100 6412900 7772 1295 7879 34934;34935;34936;34937;34938 23089 23089 1 TIIFSIHQPR KRMSKQGRTIIFSIHQ IFSIHQPRYSIFKLFD R T I P R Y 0 1 0 0 0 1 0 0 1 3 0 0 0 1 1 1 1 0 0 0 0 10 0 1210.6822 Q9UNQ0-2;Q9UNQ0 Q9UNQ0-2 237 246 ABCG2 ATP-binding cassette sub-family G member 2 yes no 3 0.0071062 81.95 By matching By matching By matching By matching By matching By MS/MS 1 2361500 0 0 0 0 0 2361500 7773 1616 7880 34939 23090 23090 1 TIIFVETK IMAEKENKTIIFVETK TIIFVETKRRCDDLTR K T I T K R 0 0 0 0 0 0 1 0 0 2 0 1 0 1 0 0 2 0 0 1 0 8 0 949.54843 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 342 349 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 2 5.4178E-49 143.73 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 81793000 10348000 10394000 14927000 2317200 10802000 33005000 7774 1361;629 7881 34940;34941;34942;34943;34944;34945 23091;23092;23093;23094;23095 23093 5 TIIGQQGDQSCANK KYKPTSLKTIIGQQGD GDQSCANKLLRWLRNW K T I N K L 1 0 1 1 1 3 0 2 0 2 0 1 0 0 0 1 1 0 0 0 0 14 0 1518.7097 P35251-2;P35251 P35251-2 597 610 RFC1 Replication factor C subunit 1 yes no 2 2.8258E-71 136.83 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 15522000 2843500 2786100 1941400 1274900 242860 6433300 7775 896 7882 34946;34947;34948;34949;34950;34951 23096;23097;23098;23099;23100 23098 5 TIIQNPTDQQK QHVIDGEKTIIQNPTD QNPTDQQKKDHEKAEF K T I Q K K 0 0 1 1 0 3 0 0 0 2 0 1 0 0 1 0 2 0 0 0 0 11 0 1284.6674 F8VR77;F8VRZ3;F8VTY8;Q9UQ80;H0Y3X3 F8VR77 200 210 PA2G4 Proliferation-associated protein 2G4 yes no 2 6.1909E-05 100.93 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 9750100 1275500 1383100 1750700 1675100 2171100 1494600 7776 536 7883 34952;34953;34954;34955;34956;34957 23101;23102;23103 23102 3 TIKVSYARPSSEVIK NGLRLQSKTIKVSYAR RPSSEVIKDANLYISG K T I I K D 1 1 0 0 0 0 1 0 0 2 0 2 0 0 1 3 1 0 1 2 0 15 2 1676.9461 Q15717 Q15717 90 104 ELAVL1 ELAV-like protein 1 yes yes 4 0.019046 41.996 By matching By MS/MS By matching By matching By matching By matching 1 1 1 5052200 0 1955700 1210600 0 0 1885900 7777 1146 7884 34958;34959;34960 23104 23104 1 TILNLENSNK EKTDEDEKTILNLENS LNLENSNKSLSGELRE K T I N K S 0 0 3 0 0 0 1 0 0 1 2 1 0 0 0 1 1 0 0 0 0 10 0 1144.6088 Q8IX12-2;Q8IX12 Q8IX12-2 1053 1062 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes no 2 0.021394 62.466 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 2680500 0 901760 0 186290 379680 1212800 7778 1285 7885 34961;34962;34963;34964 23105 23105 1 TINDIFKHEK SKPSEERKTINDIFKH NDIFKHEKLSRSDPHR K T I E K L 0 0 1 1 0 0 1 0 1 2 0 2 0 1 0 0 1 0 0 0 0 10 1 1243.6561 Q14865-2;Q14865 Q14865-2 525 534 ARID5B AT-rich interactive domain-containing protein 5B yes no 3 0.020306 63.694 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2959000 0 577340 0 0 705630 1676100 7779 1117 7886 34965;34966;34967 23106 23106 1 TINLTDRQVK ERRLEISKTINLTDRQ NLTDRQVKIWFQNRRM K T I V K I 0 1 1 1 0 1 0 0 0 1 1 1 0 0 0 0 2 0 0 1 0 10 1 1186.667 Q9NYD6 Q9NYD6 304 313 HOXC10 Homeobox protein Hox-C10 yes yes 2 0.019021 84.507 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 14345000 1307400 1115100 2525700 1284800 2866700 5245400 7780 1562 7887 34968;34969;34970;34971;34972;34973 23107 23107 1 TIQAVGECEQSESSAFK HKVTILQKTIQAVGEC QSESSAFKADPKISKR K T I F K A 2 0 0 0 1 2 3 1 0 1 0 1 0 1 0 3 1 0 0 1 0 17 0 1869.8415 F5H0W5;Q9BR77-2;Q9BR77 F5H0W5 145 161 CCDC77 Coiled-coil domain-containing protein 77 yes no 2 0.0040977 48.907 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2440900 0 559200 623790 0 0 1257900 7781 506 7888 34974;34975;34976 23108 23108 1 TIQAVGECEQSESSAFKADPK HKVTILQKTIQAVGEC SAFKADPKISKRRPSR K T I P K I 3 0 0 1 1 2 3 1 0 1 0 2 0 1 1 3 1 0 0 1 0 21 1 2281.0532 F5H0W5;Q9BR77-2;Q9BR77 F5H0W5 145 165 CCDC77 Coiled-coil domain-containing protein 77 yes no 3 0.0089476 41.31 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 9088700 0 2694200 2486400 883330 0 3024800 7782 506 7889 34977;34978;34979;34980 23109;23110 23110 2 TIQDGDSDELTIK EQEEEVLKTIQDGDSD DSDELTIKRFIEGKEK K T I I K R 0 0 0 3 0 1 1 1 0 2 1 1 0 0 0 1 2 0 0 0 0 13 0 1433.6886 Q9Y4C1;F5H4E6;F5H070 Q9Y4C1 1149 1161 KDM3A Lysine-specific demethylase 3A yes no 2 0.0061065 59.709 By matching By matching By matching By matching By matching By MS/MS 1 1168900 0 0 0 0 0 1168900 7783 516 7890 34981 23111;23112 23112 2 TIQTPIGSTWNTQR THHWQFERTIQTPIGS GSTWNTQRAFQKLTTP R T I Q R A 0 1 1 0 0 2 0 1 0 2 0 0 0 0 1 1 4 1 0 0 0 14 0 1601.8162 E9PEL7;Q9BVJ6;Q9BVJ6-2;F8WD00;Q5TAP6 E9PEL7 646 659 UTP14A;UTP14C U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C yes no 2 0.0056126 55.66 By matching By MS/MS By matching By matching By matching By matching 1 2760100 0 2760100 0 0 0 0 7784 425 7891 34982 23113 23113 1 TIQVPQQK TPALKLTKTIQVPQQK TIQVPQQKAMAPLHPH K T I Q K A 0 0 0 0 0 3 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 8 0 940.53418 Q9BY77;F8WCX5 Q9BY77 148 155 POLDIP3 Polymerase delta-interacting protein 3 yes no 2 0.03217 70.525 By matching By MS/MS By matching By matching By matching By matching 1 1 1 8856200 1629200 2406500 4820500 0 0 0 7785 1465 7892 34983;34984;34985 23114 23114 1 TISHVIIGLK NPMGGYGKTISHVIIG SHVIIGLKTAKGTKQL K T I L K T 0 0 0 0 0 0 0 1 1 3 1 1 0 0 0 1 1 0 0 1 0 10 0 1079.6703 Q9Y265;Q9Y265-2;E7ETR0 Q9Y265 153 162 RUVBL1 RuvB-like 1 yes no 2 4.1985E-05 109.29 By MS/MS By matching By matching By matching By matching By matching 1 1 1577600 1028600 0 0 0 549020 0 7786 1629 7893 34986;34987 23115 23115 1 TIVEAASDEER ADLKRICKTIVEAASD EAASDEERLKAFAPIQ K T I E R L 2 1 0 1 0 0 3 0 0 1 0 0 0 0 0 1 1 0 0 1 0 11 0 1218.5728 Q9NWY4 Q9NWY4 254 264 C4orf27 UPF0609 protein C4orf27 yes yes 2 0.026665 66.326 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4145000 0 995770 499980 0 573690 2075600 7787 1558 7894 34988;34989;34990;34991 23116 23116 0 TIVFVETK IMSEKENKTIVFVETK TIVFVETKRRCDELTR K T I T K R 0 0 0 0 0 0 1 0 0 1 0 1 0 1 0 0 2 0 0 2 0 8 0 935.53278 P17844;E7ETL9 P17844 344 351 DDX5 Probable ATP-dependent RNA helicase DDX5 yes no 2 0.031186 70.816 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 80782000 0 0 6556700 8496500 19597000 46131000 7788 853 7895 34992;34993;34994;34995 23117 23117 1 TIYSSYQLAALQRR PKKVRKPRTIYSSYQL QLAALQRRFQKAQYLA R T I R R F 2 2 0 0 0 2 0 0 0 1 2 0 0 0 0 2 1 0 2 0 0 14 1 1668.8948 O60479;F8VXG1 O60479 134 147 DLX3 Homeobox protein DLX-3 yes no 3 0.01967 39.73 By matching By matching By matching By matching By matching By MS/MS 1 7589900 0 0 0 0 0 7589900 7789 730 7896 34996 23118 23118 1 TKDHTLVQTIAR PFCKIAAKTKDHTLVQ TLVQTIARGVFEAIVD K T K A R G 1 1 0 1 0 1 0 0 1 1 1 1 0 0 0 0 3 0 0 1 0 12 1 1381.7678 Q14684-2;Q14684 Q14684-2 185 196 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 3 1.2144E-117 156.52 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 91168000 10209000 11031000 6368400 7286600 21537000 34736000 7790 1111 7897 34997;34998;34999;35000;35001;35002;35003 23119;23120;23121;23122;23123;23124 23122 6 TKENVNATENCISAVGK VIQSADSKTKENVNAT NCISAVGKIMKFKPDC K T K G K I 2 0 3 0 1 0 2 1 0 1 0 2 0 0 0 1 2 0 0 2 0 17 1 1833.8891 B4E0R6;O00410-2;O00410;H0Y8C6;O00410-3 B4E0R6 837 853 IPO5 Importin-5 yes no 3 0.013812 41.257 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3629200 0 0 1368200 824520 0 1436600 7791 155 7898 35004;35005;35006 23125;23126 23126 2 TKEQILEEFSK VGSIPKSKTKEQILEE QILEEFSKVTEGLTDV K T K S K V 0 0 0 0 0 1 3 0 0 1 1 2 0 1 0 1 1 0 0 0 0 11 1 1350.7031 O60506-2;O60506;O60506-4;O60506-3;O60506-5 O60506-2 255 265 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 3 0.014268 60.157 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6749600 1916700 1306000 0 1053100 0 2473800 7792 731 7899 35007;35008;35009;35010 23127 23127 1 TKFNVATQNVSTLSSK KDEPLCAKTKFNVATQ NVSTLSSKVKRKDAKH K T K S K V 1 0 2 0 0 1 0 0 0 0 1 2 0 1 0 3 3 0 0 2 0 16 1 1723.9105 B4DY82;Q96HI0 B4DY82 80 95 SENP5 Sentrin-specific protease 5 yes no 3 0.0064128 47.506 By MS/MS By matching By matching By matching By matching By matching 1 1617500 1617500 0 0 0 0 0 7793 142 7900 35011 23128 23128 1 TKGHLDAELDAYMAQTDPETND QLDAYMSKTKGHLDAE QTDPETND________ K T K N D - 3 0 1 4 0 1 2 1 1 0 2 1 1 0 1 0 3 0 1 0 0 22 1 2434.0594 Q9Y3Y2-4;Q9Y3Y2;Q9Y3Y2-3 Q9Y3Y2-4 181 202 CHTOP Chromatin target of PRMT1 protein yes no 3 1.1866E-06 78.418 By matching By matching By matching By MS/MS By matching By matching 1 1 10301000 0 4793700 0 5507000 0 0 7794 1649 7901 35012;35013 23129 23129 1 TKGIEVGHTFYLGTK ACQGPLTKTKGIEVGH HTFYLGTKYSSIFNAQ K T K T K Y 0 0 0 0 0 0 1 3 1 1 1 2 0 1 0 0 3 0 1 1 0 15 1 1649.8777 Q7L3T8 Q7L3T8 302 316 PARS2 Probable proline--tRNA ligase, mitochondrial yes yes 3 0.0016644 68.283 By matching By matching By matching By matching By matching By MS/MS 1 4873600 0 0 0 0 0 4873600 7795 1245 7902 35014 23130 23130 1 TKIKADPDGPEAQAEACSGER ________________ AEACSGERTYQELLVN M T K E R T 4 1 0 2 1 1 3 2 0 1 0 2 0 0 2 1 1 0 0 0 0 21 2 2229.0332 D6RC52;D6RCB9;Q9NX24 D6RC52 2 22 NHP2 H/ACA ribonucleoprotein complex subunit 2 yes no 3;4 1.1783E-05 77.66 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 3 2 2 2 2 40295000 14875000 3830900 4362600 3014000 10971000 3241500 7796 323 7903 35015;35016;35017;35018;35019;35020;35021;35022;35023;35024;35025;35026;35027 23131;23132;23133;23134;23135;23136;23137;23138;23139;23140;23141 23133 10 TKPKEDCLLGSAK SGSKKFKKTKPKEDCL DCLLGSAKLDEEFEKK K T K A K L 1 0 0 1 1 0 1 1 0 0 2 3 0 0 1 1 1 0 0 0 0 13 2 1445.7548 C9JA69;Q8WY36-2;Q8WY36 C9JA69 676 688 BBX HMG box transcription factor BBX yes no 3 0.0036771 77.74 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 3716800 307260 0 1255600 724610 0 1429300 7797 238 7904 35028;35029;35030;35031 23142 23142 1 TKSDSGTAAQTSLDIDKNEK TRRQKEAKTKSDSGTA LDIDKNEKCYLCKSLV K T K E K C 2 0 1 3 0 1 1 1 0 1 1 3 0 0 0 3 3 0 0 0 0 20 2 2108.0233 Q96RL1;F8VQY2;Q96RL1-3;F2Z2T8;Q96RL1-2;Q96RL1-4;H7BXP9 Q96RL1 543 562 UIMC1 BRCA1-A complex subunit RAP80 yes no 3 0.0092044 54.511 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 2 7272500 1195800 1656100 2030100 1026900 628590 734960 7798 535 7905 35032;35033;35034;35035;35036;35037;35038 23143;23144 23143 2 TKVADPGPASTGSNTTASDSLGGSVPK SSAPTLLKTKVADPGP SLGGSVPKAATTATPA K T K P K A 3 0 1 2 0 0 0 4 0 0 1 2 0 0 3 5 4 0 0 2 0 27 1 2501.2245 Q92766-3;Q92766;Q92766-2 Q92766-3 1084 1110 RREB1 Ras-responsive element-binding protein 1 yes no 3 0.012742 32.962 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5786600 0 1178200 0 0 2608500 1999900 7799 1357 7906 35039;35040;35041 23145 23145 1 TKVGDGDLSAEEIPENEVSLRR EETMEEQKTKVGDGDL ENEVSLRRAVSKKKTA K T K R R A 1 2 1 2 0 0 4 2 0 1 2 1 0 0 1 2 1 0 0 2 0 22 2 2413.2085 Q14684-2;Q14684 Q14684-2 219 240 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 3;4 0.001624 50.916 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 2 1 29562000 10099000 12885000 0 6577300 0 0 7800 1111 7907 35042;35043;35044;35045 23146;23147;23148 23148 3 TKYPTQSGKPPLLVSAPSK PLFTESQKTKYPTQSG LLVSAPSKSESALSCL K T K S K S 1 0 0 0 0 1 0 1 0 0 2 3 0 0 4 3 2 0 1 1 0 19 2 1998.115 G3V529;Q9GZR7;Q4V9L5;F5GYL3;F5H4V3 G3V529 764 782 DDX24 ATP-dependent RNA helicase DDX24 yes no 4 0.00052823 77.969 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 8298600 910850 1430400 1256700 849180 0 3851500 7801 588 7908 35046;35047;35048;35049;35050 23149;23150 23150 1 TLAMLDEEPKTK HEDEEFARTLAMLDEE LDEEPKTKKARKDTEA R T L T K K 1 0 0 1 0 0 2 0 0 0 2 2 1 0 1 0 2 0 0 0 0 12 1 1374.7065 P35251-2;P35251 P35251-2 228 239 RFC1 Replication factor C subunit 1 yes no 3 0.0088439 60.301 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 6982000 638260 1996100 1233300 0 0 3114400 7802 896 7909 35051;35052;35053;35054 23151;23152 23152 2 TLATWATK RSKTNKAKTLATWATK TLATWATKELRKLKNQ K T L T K E 2 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 3 1 0 0 0 8 0 890.48617 Q14974;F5H4R7;B7ZAV6 Q14974 860 867 KPNB1 Importin subunit beta-1 yes no 2 0.012377 90.601 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 26856000 1835500 4744300 0 0 6219100 14057000 7803 1119 7910 35055;35056;35057;35058 23153;23154 23153 2 TLAVSGLGVVGRDK LTEGDSAKTLAVSGLG LGVVGRDKYGVFPLRG K T L D K Y 1 1 0 1 0 0 0 3 0 0 2 1 0 0 0 1 1 0 0 3 0 14 1 1370.7882 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5 P11388 467 480 TOP2A DNA topoisomerase 2-alpha yes no 3 8.7899E-06 94.688 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 2 1 2 34230000 0 4259900 19230000 2134700 2026000 6580000 7804 655 7911 35059;35060;35061;35062;35063;35064;35065 23155;23156;23157;23158 23158 4 TLCLSTPSSSTVK APSLEKEKTLCLSTPS TPSSSTVKHSTSSIGS K T L V K H 0 0 0 0 1 0 0 0 0 0 2 1 0 0 1 4 3 0 0 1 0 13 0 1379.6966 Q03164-2;Q03164;E9PQG7;E9PR05 Q03164-2 988 1000 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 2 0.0057992 60.157 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 3432400 0 0 883970 814010 0 1734500 7805 464 7912 35066;35067;35068 23159;23160 23160 2 TLEEDVDDRAPSK AKPEEQRKTLEEDVDD VDDRAPSKKGKKRKAQ K T L S K K 1 1 0 3 0 0 2 0 0 0 1 1 0 0 1 1 1 0 0 1 0 13 1 1473.6947 Q13823 Q13823 642 654 GNL2 Nucleolar GTP-binding protein 2 yes yes 3 1.7753E-05 98.368 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 6543100 591930 1574400 718790 655790 1373100 1629100 7806 1092 7913 35069;35070;35071;35072;35073;35074 23161;23162;23163 23161 3 TLEEIKLEK SMQEVHIKTLEEIKLE LEEIKLEKALRVQQSS K T L E K A 0 0 0 0 0 0 3 0 0 1 2 2 0 0 0 0 1 0 0 0 0 9 1 1101.6281 B4DLG2;O75152;E9PQ61;E9PBY7 B4DLG2 419 427 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 2 4.6159E-127 167.67 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 22471000 5033700 4314100 0 0 6006000 7117200 7807 97 7914 35075;35076;35077;35078 23164;23165;23166;23167;23168 23164 5 TLEEPVSTEK SRKGSQKKTLEEPVST EEPVSTEKNIG_____ K T L E K N 0 0 0 0 0 0 3 0 0 0 1 1 0 0 1 1 2 0 0 1 0 10 0 1131.5659 Q99590-2;F8VXG7;Q99590 Q99590-2 1136 1145 SCAF11 Protein SCAF11 yes no 2 0.02416 60.167 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1844400 579150 420550 0 0 509290 335420 7808 547 7915 35079;35080;35081;35082 23169 23169 1 TLEEPVSTEKNIG SRKGSQKKTLEEPVST VSTEKNIG________ K T L I G - 0 0 1 0 0 0 3 1 0 1 1 1 0 0 1 1 2 0 0 1 0 13 1 1415.7144 Q99590-2;F8VXG7;Q99590 Q99590-2 1136 1148 SCAF11 Protein SCAF11 yes no 2 0.00052413 91.202 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 35266000 5183800 5142900 5497600 4582700 5736500 9123000 7809 547 7916 35083;35084;35085;35086;35087;35088 23170;23171;23172;23173 23171 2 TLEEQGVAHNVK KKQLQLGKTLEEQGVA QGVAHNVKAM______ K T L V K A 1 0 1 0 0 1 2 1 1 0 1 1 0 0 0 0 1 0 0 2 0 12 0 1323.6783 C9J7X7;C9JRT6;F8WDB6;Q9Y5A7-2;Q9Y5A7;H3BM14;H3BM74 C9J7X7 141 152 NUB1 NEDD8 ultimate buster 1 yes no 3 0.0055766 62.528 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 2389200 380980 0 467490 294940 735180 510630 7810 234 7917 35089;35090;35091;35092;35093 23174 23174 1 TLEGELHDLRGQVAK STALSEKRTLEGELHD DLRGQVAKLEAALGEA R T L A K L 1 1 0 1 0 1 2 2 1 0 3 1 0 0 0 0 1 0 0 1 0 15 1 1664.8846 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q3BDU5;Q5TCJ4;Q5TCI8;H0YAB0 P02545 157 171 LMNA Prelamin-A/C;Lamin-A/C yes no 3 0.0032385 57.434 By MS/MS By matching By matching By matching By matching By matching 1 6303400 6303400 0 0 0 0 0 7811 783 7918 35094 23175 23175 1 TLENSPISSCDTSDTEGPVPVNSAAVLKK QSPVFRHRTLENSPIS NSAAVLKKSQAAPGSS R T L K K S 2 0 2 2 1 0 2 1 0 1 2 2 0 0 3 5 3 0 0 3 0 29 1 3015.4707 Q8N556;E9PDT7 Q8N556 675 703 AFAP1 Actin filament-associated protein 1 yes no 3 2.603E-30 86.248 By MS/MS By matching By matching By matching By matching By matching 1 36203000 36203000 0 0 0 0 0 7812 423 7919 35095 23176 23176 1 TLEQLAQQGK LGKAVVVKTLEQLAQQ EQLAQQGKIKEKMYGK K T L G K I 1 0 0 0 0 3 1 1 0 0 2 1 0 0 0 0 1 0 0 0 0 10 0 1114.5982 Q9P2W1;Q9P2W1-2 Q9P2W1 50 59 PSMC3IP Homologous-pairing protein 2 homolog yes no 2 3.8524E-06 112.71 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 15748000 1263600 1334100 1081200 759420 5481100 5828400 7813 1580 7920 35096;35097;35098;35099;35100;35101 23177;23178;23179;23180 23178 4 TLEQLAQQGKIKEK LGKAVVVKTLEQLAQQ QQGKIKEKMYGKQKIY K T L E K M 1 0 0 0 0 3 2 1 0 1 2 3 0 0 0 0 1 0 0 0 0 14 2 1612.9148 Q9P2W1;Q9P2W1-2 Q9P2W1 50 63 PSMC3IP Homologous-pairing protein 2 homolog yes no 3;4 0.0016638 66.784 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 2 2 23572000 4723700 1483600 3577500 2902500 6408300 4476900 7814 1580 7921 35102;35103;35104;35105;35106;35107;35108;35109;35110;35111;35112 23181;23182;23183;23184;23185 23185 5 TLESQAVETEK EIVSSLGKTLESQAVE SQAVETEKVLDIIYQP K T L E K V 1 0 0 0 0 1 3 0 0 0 1 1 0 0 0 1 2 0 0 1 0 11 0 1233.6089 F5GZ79;Q9NVX2 F5GZ79 76 86 NLE1 Notchless protein homolog 1 yes no 2 0.0008967 93.839 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 3694200 0 610560 515290 437760 930110 1200500 7815 498 7922 35113;35114;35115;35116;35117 23186;23187;23188 23187 3 TLETLIR RTSPVTARTLETLIRL RTLETLIRLATAHAKA R T L I R L 0 1 0 0 0 0 1 0 0 1 2 0 0 0 0 0 2 0 0 0 0 7 0 844.50182 P25205;Q7Z6P5;E9PF11 P25205 617 623 MCM3 DNA replication licensing factor MCM3 yes no 2 0.0036488 111.04 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 33828000 0 4983400 3425500 0 0 25419000 7816 873 7923 35118;35119;35120 23189;23190 23190 1 TLETVPLER ________________ LETVPLERKKREKEQF K T L E R K 0 1 0 0 0 0 2 0 0 0 2 0 0 0 1 0 2 0 0 1 0 9 0 1056.5815 P22626 P22626 4 12 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 2 0.011764 82.645 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 11060000 0 2834900 1125800 1144600 1893600 4060700 7817 863 7924 35121;35122;35123;35124;35125 23191 23191 1 TLFQPQTGAYQTLAK LINTDKEKTLFQPQTG GAYQTLAKECVAQGCC K T L A K E 2 0 0 0 0 3 0 1 0 0 2 1 0 1 1 0 3 0 1 0 0 15 0 1665.8726 E7EP00;G5EA31;P53992 E7EP00 552 566 SEC24C Protein transport protein Sec24C yes no 2 0.023982 57.288 By matching By MS/MS By matching By matching By matching By matching 1 26475000 0 26475000 0 0 0 0 7818 354 7925 35126 23192 23192 0 TLGDFAAEYAK GIGSKAEKTLGDFAAE DFAAEYAKSNRSTCKG K T L A K S 3 0 0 1 0 0 1 1 0 0 1 1 0 1 0 0 1 0 1 0 0 11 0 1184.5714 P09874;F8WC10 P09874 109 119 PARP1 Poly [ADP-ribose] polymerase 1 yes no 2 4.4886E-13 117.09 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 685160000 162020000 175980000 94435000 123430000 43347000 85951000 7819 815 7926 35127;35128;35129;35130;35131;35132;35133 23193;23194;23195;23196;23197;23198;23199 23196 7 TLGETSANAETEQNK KGSNLHEKTLGETSAN NAETEQNKKKADPENI K T L N K K 2 0 2 0 0 1 3 1 0 0 1 1 0 0 0 1 3 0 0 0 0 15 0 1591.7326 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1489 1503 RIF1 Telomere-associated protein RIF1 yes no 2 0.0023049 66.568 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 5175400 0 900980 1209200 363910 771960 1929300 7820 1201 7927 35134;35135;35136;35137;35138 23200;23201;23202 23202 3 TLGETSANAETEQNKK KGSNLHEKTLGETSAN AETEQNKKKADPENIK K T L K K K 2 0 2 0 0 1 3 1 0 0 1 2 0 0 0 1 3 0 0 0 0 16 1 1719.8275 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1489 1504 RIF1 Telomere-associated protein RIF1 yes no 3 8.6228E-52 124.62 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 23088000 1748100 3556500 4848700 2070000 3762700 7102100 7821 1201 7928 35139;35140;35141;35142;35143;35144 23203;23204;23205;23206;23207;23208;23209 23204 7 TLGETSANAETEQNKKK KGSNLHEKTLGETSAN ETEQNKKKADPENIKS K T L K K A 2 0 2 0 0 1 3 1 0 0 1 3 0 0 0 1 3 0 0 0 0 17 2 1847.9225 Q5UIP0-2;Q5UIP0 Q5UIP0-2 1489 1505 RIF1 Telomere-associated protein RIF1 yes no 3 0.035332 42.314 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 17548000 1915700 3513900 5649100 1450300 1091200 3928100 7822 1201 7929 35145;35146;35147;35148;35149;35150 23210 23210 1 TLGTPTQPGSTPR LAFTPPIKTLGTPTQP TQPGSTPRISTMRPLA K T L P R I 0 1 0 0 0 1 0 2 0 0 1 0 0 0 3 1 4 0 0 0 0 13 0 1311.6783 B4DYB4;Q8NFH5;B4DP57 B4DYB4 253 265 NUP35 Nucleoporin NUP53 yes no 2 0.014367 52.008 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 7344200 0 1223400 154570 332450 1493900 4139900 7823 144 7930 35151;35152;35153;35154;35155 23211;23212 23211 2 TLGVQRPK DLYWQAMKTLGVQRPK TLGVQRPKLEKKDAKE K T L P K L 0 1 0 0 0 1 0 1 0 0 1 1 0 0 1 0 1 0 0 1 0 8 1 897.5396 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 1061 1068 MYBBP1A Myb-binding protein 1A yes no 2 0.038407 87.323 By matching By MS/MS By matching By matching By matching By matching 1 1 1045900 0 836710 0 0 209150 0 7824 682 7931 35156;35157 23213 23213 1 TLGVQRPKLEK DLYWQAMKTLGVQRPK VQRPKLEKKDAKEIPS K T L E K K 0 1 0 0 0 1 1 1 0 0 2 2 0 0 1 0 1 0 0 1 0 11 2 1267.7612 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 1061 1071 MYBBP1A Myb-binding protein 1A yes no 3 0.00081668 102.05 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 27598000 0 627410 5526000 3893100 10439000 7112500 7825 682 7932 35158;35159;35160;35161;35162 23214;23215 23214 0 TLKEENMQQAR RELQRHNKTLKEENMQ EENMQQAREEEERRKE K T L A R E 1 1 1 0 0 2 2 0 0 0 1 1 1 0 0 0 1 0 0 0 0 11 1 1346.6612 Q9NUQ3;Q9NUQ3-2 Q9NUQ3 221 231 TXLNG Gamma-taxilin yes no 3 0.00075282 94.465 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 3501200 650890 469400 1515300 411970 0 453580 7826 1546 7933 35163;35164;35165;35166;35167 23216 23216 1 TLKNDCEENGLAK PKKESKKKTLKNDCEE CEENGLAKESEDDLNK K T L A K E 1 0 2 1 1 0 2 1 0 0 2 2 0 0 0 0 1 0 0 0 0 13 1 1490.7035 O43719;E9PFP2 O43719 507 519 HTATSF1 HIV Tat-specific factor 1 yes no 3 0.015308 51.612 By MS/MS By matching By matching By matching By matching By matching 1 1 1406500 758420 0 0 648030 0 0 7827 720 7934 35168;35169 23217 23217 1 TLLADKGEIR LVYDPQQKTLLADKGE LADKGEIRVGNRYQAD K T L I R V 1 1 0 1 0 0 1 1 0 1 2 1 0 0 0 0 1 0 0 0 0 10 1 1114.6346 Q13330;Q13330-3;E7ESY4;E7EN71;Q13330-2;F8VSM3;E7EQY4;Q9BTC8-2;D6W5A2;F8W8M8;E7EV10;Q9BTC8;E9PCS8 Q13330 159 168 MTA1;MTA3 Metastasis-associated protein MTA1;Metastasis-associated protein MTA3 no no 2 0.0073395 96.113 By matching By matching By matching By matching By matching By MS/MS 1 1 3419700 0 1654300 0 0 0 1765300 7828 1078;331 7935 35170;35171 23218 23218 1 TLLADQGEIR LVFDPVQKTLLADQGE LADQGEIRVGCKYQAE K T L I R V 1 1 0 1 0 1 1 1 0 1 2 0 0 0 0 0 1 0 0 0 0 10 0 1114.5982 O94776 O94776 139 148 MTA2 Metastasis-associated protein MTA2 yes yes 2 0.033976 55.721 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 92440000 0 19130000 10739000 0 2267900 60304000 7829 754 7936 35172;35173;35174;35175 23219;23220 23220 2 TLLADQGEIRVGCK LVFDPVQKTLLADQGE GEIRVGCKYQAEIPDR K T L C K Y 1 1 0 1 1 1 1 2 0 1 2 1 0 0 0 0 1 0 0 1 0 14 1 1558.8137 O94776 O94776 139 152 MTA2 Metastasis-associated protein MTA2 yes yes 2;3 7.5948E-20 107.53 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 2 1 1 2 454420000 3449700 132340000 143790000 8436000 964860 165430000 7830 754 7937 35176;35177;35178;35179;35180;35181;35182;35183;35184 23221;23222;23223;23224;23225;23226 23221 6 TLLDIDNTR DLTVGNNKTLLDIDNT LLDIDNTRMTLDDFRI K T L T R M 0 1 1 2 0 0 0 0 0 1 2 0 0 0 0 0 2 0 0 0 0 9 0 1059.556 P35527;CON__P35527 P35527 225 233 KRT9 Keratin, type I cytoskeletal 9 yes no 2 0.024533 67.334 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4240500 1019500 0 0 1004500 0 2216600 + 7831 899 7938 35185;35186;35187 23227 23227 1 TLLDSLRSTSSPAK SHLEDLKKTLLDSLRS RSTSSPAKRPRLKCLL K T L A K R 1 1 0 1 0 0 0 0 0 0 3 1 0 0 1 4 2 0 0 0 0 14 1 1474.7991 Q5JTH9-2;E9PCK7;Q5JTH9;F5H456 Q5JTH9-2 720 733 RRP12 RRP12-like protein yes no 3 0.0032664 60.301 By matching By matching By matching By matching By matching By MS/MS 1 4345700 0 0 0 0 0 4345700 7832 414 7939 35188 23228 23228 1 TLLEGEESR DLEIATYRTLLEGEES LLEGEESRMSGECAPN R T L S R M 0 1 0 0 0 0 3 1 0 0 2 0 0 0 0 1 1 0 0 0 0 9 0 1032.5088 P04264;CON__P04264 P04264 484 492 KRT1 Keratin, type II cytoskeletal 1 no no 2 3.3183E-19 125.71 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 38169000 1683200 12323000 10851000 2383700 5887300 5040600 + 7833 789 7940 35189;35190;35191;35192;35193;35194 23229;23230;23231 23231 3 TLLKAPGSTSNLARK PNKLGLKKTLLKAPGS STSNLARKSSSGPVWS K T L R K S 2 1 1 0 0 0 0 1 0 0 3 2 0 0 1 2 2 0 0 0 0 15 2 1555.9046 Q9NYZ3 Q9NYZ3 296 310 GTSE1 G2 and S phase-expressed protein 1 yes yes 3 1.0813E-17 109.83 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 16458000 0 2761700 4325600 2154500 2614300 4602000 7834 1564 7941 35195;35196;35197;35198;35199 23232;23233;23234;23235 23234 0 TLLSESSSQSSKSPSLSSK LDSLGRKKTLLSESSS KSPSLSSKQQHQPSAS K T L S K Q 0 0 0 0 0 1 1 0 0 0 3 2 0 0 1 10 1 0 0 0 0 19 1 1938.9746 B7WPF4;Q9UPU5 B7WPF4 969 987 USP24 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 24 yes no 3 0.0015144 53.453 By matching By matching By matching By matching By matching By MS/MS 1 1 2192700 0 727230 0 0 0 1465500 7835 180 7942 35200;35201 23236 23236 1 TLLVNNNRICR FPLLRRLKTLLVNNNR VNNNRICRIGEGLDQA K T L C R I 0 2 3 0 1 0 0 0 0 1 2 0 0 0 0 0 1 0 0 1 0 11 1 1371.7405 P09661;H0YKK0 P09661 68 78 SNRPA1 U2 small nuclear ribonucleoprotein A yes no 3 0.026842 52.579 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2270100 0 899400 0 0 425990 944720 7836 814 7943 35202;35203;35204 23237 23237 1 TLLVSTSAVDNNEAQK AALKAAQKTLLVSTSA VDNNEAQKKKQEALKL K T L Q K K 2 0 2 1 0 1 1 0 0 0 2 1 0 0 0 2 2 0 0 2 0 16 0 1688.8581 Q5T8P6-5;Q5T8P6-4;Q5T8P6-3;Q5T8P6-2;Q5T8P6 Q5T8P6-5 237 252 RBM26 RNA-binding protein 26 yes no 2 0.0062692 47.548 By matching By matching By MS/MS By matching By matching By matching 1 1 1 3002400 835770 0 824950 0 0 1341600 7837 1196 7944 35205;35206;35207 23238 23238 1 TLLVSTSAVDNNEAQKK AALKAAQKTLLVSTSA DNNEAQKKKQEALKLQ K T L K K K 2 0 2 1 0 1 1 0 0 0 2 2 0 0 0 2 2 0 0 2 0 17 1 1816.9531 Q5T8P6-5;Q5T8P6-4;Q5T8P6-3;Q5T8P6-2;Q5T8P6 Q5T8P6-5 237 253 RBM26 RNA-binding protein 26 yes no 3 0.012731 38.889 By matching By matching By MS/MS By matching By matching By matching 1 1 2516100 0 0 1357300 0 1158900 0 7838 1196 7945 35208;35209 23239 23239 1 TLMGVDPGYKHGCK LTSPVPGRTLMGVDPG PGYKHGCKLAIISPTS R T L C K L 0 0 0 1 1 0 0 3 1 0 1 2 1 0 1 0 1 0 1 1 0 14 1 1561.7381 Q8N5C6;Q8N5C6-2;B7Z6X7 Q8N5C6 538 551 SRBD1 S1 RNA-binding domain-containing protein 1 yes no 3 0.01247 49.298 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4185300 0 0 1179900 845630 0 2159800 7839 1302 7946 35210;35211;35212 23240 23240 1 TLNDMRQEYEQLIAK APGKDLTKTLNDMRQE EYEQLIAKNRKDIENQ K T L A K N 1 1 1 1 0 2 2 0 0 1 2 1 1 0 0 0 1 0 1 0 0 15 1 1850.9196 P35527;CON__P35527 P35527 322 336 KRT9 Keratin, type I cytoskeletal 9 yes no 2;3 0.007584 71.529 By matching By matching By MS/MS By matching By matching By matching 2 1 46850000 0 0 44174000 0 2675900 0 + 7840 899 7947 35213;35214;35215 23241;23242 23241 99 2 TLNFEDQTSTDNVSITK ENVQEDPKTLNFEDQT TDNVSITKDSSKEVAP K T L T K D 0 0 2 2 0 1 1 0 0 1 1 1 0 1 0 2 4 0 0 1 0 17 0 1911.9062 O60293-2;O60293;O60293-4;G3V1X1 O60293-2 263 279 ZFC3H1 Zinc finger C3H1 domain-containing protein yes no 2 3.412E-18 97.352 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 7841 729 7948 35216 23243 23243 1 TLNGGSDAQDGNQPQHNGESNEDSK EKEQTGSKTLNGGSDA GESNEDSKDNHEASTK K T L S K D 1 0 4 3 0 3 2 4 1 0 1 1 0 0 1 3 1 0 0 0 0 25 0 2598.0815 O75475 O75475 477 501 PSIP1 PC4 and SFRS1-interacting protein yes yes 3 0.0067963 36.935 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4747400 0 0 1366500 0 1139900 2241000 7842 741 7949 35217;35218;35219 23244 23244 1 TLNGGSDAQDGNQPQHNGESNEDSKDNHEASTK EKEQTGSKTLNGGSDA DNHEASTKKKPSSEER K T L T K K 2 0 5 4 0 3 3 4 2 0 1 2 0 0 1 4 2 0 0 0 0 33 1 3480.4646 O75475 O75475 477 509 PSIP1 PC4 and SFRS1-interacting protein yes yes 4 0.01606 24.032 By MS/MS By matching By matching By matching By matching By matching 1 1166900 1166900 0 0 0 0 0 7843 741 7950 35220 23245 23245 1 TLNMTTSPEEK TPRKRISKTLNMTTSP MTTSPEEKRKIIGDTF K T L E K R 0 0 1 0 0 0 2 0 0 0 1 1 1 0 1 1 3 0 0 0 0 11 0 1249.586 F8W720;B4DUT7;P49915 F8W720 227 237 GMPS GMP synthase [glutamine-hydrolyzing] yes no 2 0.0053081 72.731 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 48674000 3728600 7874300 9012300 5847900 10559000 11652000 7844 129 7951 35221;35222;35223;35224;35225;35226 23246;23247;23248;23249;23250 23250 5 TLNMTTSPEEKRK TPRKRISKTLNMTTSP TSPEEKRKIIGDTFVK K T L R K I 0 1 1 0 0 0 2 0 0 0 1 2 1 0 1 1 3 0 0 0 0 13 2 1533.7821 F8W720;B4DUT7;P49915 F8W720 227 239 GMPS GMP synthase [glutamine-hydrolyzing] yes no 3 0.004747 75.088 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 5144200 0 0 0 1177800 2331200 1635200 7845 129 7952 35227;35228;35229 23251;23252 23251 2 TLPADVQNYYSR ASSWAVRKTLPADVQN DVQNYYSRRGRNSSGP K T L S R R 1 1 1 1 0 1 0 0 0 0 1 0 0 0 1 1 1 0 2 1 0 12 0 1425.6888 Q99590-2;F8VXG7;Q99590 Q99590-2 838 849 SCAF11 Protein SCAF11 yes no 2 0.0018604 88.101 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 62952000 22833000 3261700 15859000 0 6190300 14808000 7846 547 7953 35230;35231;35232;35233;35234 23253;23254;23255;23256;23257 23255 5 TLPSTDVAQPPSDSDAVGPR TPVGAETKTLPSTDVA DSDAVGPRSGFPPQPS K T L P R S 2 1 0 3 0 1 0 1 0 0 1 0 0 0 4 3 2 0 0 2 0 20 0 2008.9702 Q8N554-2;Q8N554;H3BPT7;H3BTT0;H3BPJ6 Q8N554-2 226 245 ZNF276 Zinc finger protein 276 yes no 2 0.019152 37.4 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 6210900 3164400 0 1683900 0 531230 831400 7847 1300 7954 35235;35236;35237;35238 23258;23259 23259 2 TLQALQIPAAK LDEGDAQKTLQALQIP ALQIPAAKLEGVLAEV K T L A K L 3 0 0 0 0 2 0 0 0 1 2 1 0 0 1 0 1 0 0 0 0 11 0 1152.6867 P46940 P46940 557 567 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes yes 2 4.9351E-08 110.54 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 145300000 13599000 102540000 23553000 0 5608300 0 7848 929 7955 35239;35240;35241;35242 23260;23261;23262 23261 3 TLQGHSVIR GVEPQNLRTLQGHSVI LQGHSVIRSATNTTLP R T L I R S 0 1 0 0 0 1 0 1 1 1 1 0 0 0 0 1 1 0 0 1 0 9 0 1009.5669 Q8WXI9 Q8WXI9 241 249 GATAD2B Transcriptional repressor p66-beta yes yes 2 0.0062516 95.775 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 3728000 0 1476100 2251900 0 0 0 7849 1344 7956 35243;35244 23263;23264 23264 2 TLQHGLYYASR YYRDPRERTLQHGLYY HGLYYASRSRSPNRFD R T L S R S 1 1 0 0 0 1 0 1 1 0 2 0 0 0 0 1 1 0 2 0 0 11 0 1307.6622 Q96T58;Q5VVE3;F6WRY4 Q96T58 177 187 SPEN Msx2-interacting protein yes no 3 0.021945 52.576 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 3790200 572860 0 175660 566890 1170300 1304500 7850 1422 7957 35245;35246;35247;35248;35249 23265 23265 1 TLQLDNNFEVK LRKLKNFKTLQLDNNF LDNNFEVKSLIFDQSG K T L V K S 0 0 2 1 0 1 1 0 0 0 2 1 0 1 0 0 1 0 0 1 0 11 0 1319.6721 Q9UMS4 Q9UMS4 429 439 PRPF19 Pre-mRNA-processing factor 19 yes yes 2 0.0089992 66.267 By matching By MS/MS By matching By matching By matching By matching 1 13646000 0 13646000 0 0 0 0 7851 1613 7958 35250 23266 23266 1 TLQQNAESRFN HSKGAGSKTLQQNAES QNAESRFN________ K T L F N - 1 1 2 0 0 2 1 0 0 0 1 0 0 1 0 1 1 0 0 0 0 11 1 1306.6266 B4DXE2;O95816 B4DXE2 168 178 BAG2 BAG family molecular chaperone regulator 2 yes no 2 0.0033679 92.247 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 10129000 1818300 2217100 0 951840 1885700 3255900 7852 139 7959 35251;35252;35253;35254;35255 23267 23267 1 TLREIKVTSGAK KGLVPEDKTLREIKVT IKVTSGAKIMVVGSTI K T L A K I 1 1 0 0 0 0 1 1 0 1 1 2 0 0 0 1 2 0 0 1 0 12 2 1301.7667 H3BRL3;O14562;B3KW52;H3BUM8 H3BRL3 129 140 UBFD1 Ubiquitin domain-containing protein UBFD1 yes no 3 0.0056274 79.744 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 1 5964600 943940 775590 2936200 1066800 0 242070 7853 644 7960 35256;35257;35258;35259;35260 23268;23269 23268 1 TLRSTVALTAAR FIEGISEKTLRSTVAL TVALTAARGRGKSAAL K T L A R G 3 2 0 0 0 0 0 0 0 0 2 0 0 0 0 1 3 0 0 1 0 12 1 1258.7357 Q9H0A0;E7ESU4 Q9H0A0 275 286 NAT10 N-acetyltransferase 10 yes no 3 0.0023894 74.987 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 3755500 0 823470 0 293000 2639100 0 7854 1477 7961 35261;35262;35263 23270;23271 23271 2 TLRTWNLVEGR ALSVGTDKTLRTWNLV TWNLVEGRSAFIKNIK K T L G R S 0 2 1 0 0 0 1 1 0 0 2 0 0 0 0 0 2 1 0 1 0 11 1 1343.731 Q9NWT1 Q9NWT1 146 156 PAK1IP1 p21-activated protein kinase-interacting protein 1 yes yes 3 0.038704 72.289 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 7855 1555 7962 35264 23272 23272 1 TLSDDLDEAAK VVMEPTMKTLSDDLDE DDLDEAAKEFQEKHKK K T L A K E 2 0 0 3 0 0 1 0 0 0 2 1 0 0 0 1 1 0 0 0 0 11 0 1176.551 Q9H0A0;E7ESU4;E9PMN9 Q9H0A0 932 942 NAT10 N-acetyltransferase 10 yes no 2 0.0080031 67.749 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 30697000 1640800 4016700 1208900 1605100 15006000 7219700 7856 1477 7963 35265;35266;35267;35268;35269;35270 23273;23274;23275 23274 3 TLSGAQDSEAAFAK MTLKAAFKTLSGAQDS DSEAAFAKLDQKDLVL K T L A K L 4 0 0 1 0 1 1 1 0 0 1 1 0 1 0 2 1 0 0 0 0 14 0 1394.6678 H3BTA7;H3BR06;Q15554 H3BTA7 176 189 TERF2 Telomeric repeat-binding factor 2 yes no 2 0.0016497 68.044 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 5696000 595630 818280 826910 710060 1036500 1708600 7857 641 7964 35271;35272;35273;35274;35275;35276 23276;23277;23278 23277 3 TLTDEVNSPDSDRRDK RRKKISAKTLTDEVNS PDSDRRDKKGGNYKKR K T L D K K 0 2 1 4 0 0 1 0 0 0 1 1 0 0 1 2 2 0 0 1 0 16 2 1846.8657 Q8TAQ2-2;F8VTJ5;Q8TAQ2;F8VXC8 Q8TAQ2-2 276 291 SMARCC2 SWI/SNF complex subunit SMARCC2 yes no 3;4 0.0034072 65.043 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 2 2 2 2 59444000 4932600 238820 18584000 12643000 3713600 19333000 7858 539 7965 35277;35278;35279;35280;35281;35282;35283;35284;35285;35286 23279;23280;23281;23282 23279 4 TLTIFMEYMPGGSVKDQLK CLRDRAEKTLTIFMEY GSVKDQLKAYGALTES K T L L K A 0 0 0 1 0 1 1 2 0 1 2 2 2 1 1 1 2 0 1 1 0 19 1 2157.085 Q99759;Q99759-2 Q99759 438 456 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 yes no 3 0.0010215 59.502 By matching By matching By matching By matching By MS/MS By matching 1 0 0 0 0 0 0 0 7859 1432 7966 35287 23283 23283 164;165 1 TLTPDQWAR HIHAFEQKTLTPDQWA LTPDQWARERQK____ K T L A R E 1 1 0 1 0 1 0 0 0 0 1 0 0 0 1 0 2 1 0 0 0 9 0 1086.5458 Q9H3K6 Q9H3K6 74 82 BOLA2 BolA-like protein 2 yes yes 2 0.0061685 93.178 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 8173800 987470 4892200 0 0 2294100 0 7860 1487 7967 35288;35289;35290 23284;23285 23284 2 TLTPISGGQR TIDIREERTLTPISGG TPISGGQRSSVVPSVI R T L Q R S 0 1 0 0 0 1 0 2 0 1 1 0 0 0 1 1 2 0 0 0 0 10 0 1028.5615 Q13415 Q13415 335 344 ORC1 Origin recognition complex subunit 1 yes yes 2 0.010869 72.2 By MS/MS By matching By MS/MS By matching By matching By matching 2 1 1 15298000 4465800 4780400 6051300 0 0 0 7861 1080 7968 35291;35292;35293;35294 23286;23287;23288 23286 3 TLVDNAYSCDPR KEEMNRIRTLVDNAYS NAYSCDPRIKKFKEEE R T L P R I 1 1 1 2 1 0 0 0 0 0 1 0 0 0 1 1 1 0 1 1 0 12 0 1409.6245 Q99543;Q99543-2;H7C3L7 Q99543 268 279 DNAJC2 DnaJ homolog subfamily C member 2 yes no 2 0.0018163 81.565 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 8800000 0 0 877710 1064700 2964800 3892700 7862 1426 7969 35295;35296;35297;35298 23289 23289 1 TLVNKEEPPKELPAAEPVLSPLEGTK KALTNMSRTLVNKEEP LSPLEGTKMTVNNLHP R T L T K M 2 0 1 0 0 0 5 1 0 0 4 3 0 0 5 1 2 0 0 2 0 26 2 2785.5113 Q9BY77;Q9BY77-2;B4DMM2 Q9BY77 256 281 POLDIP3 Polymerase delta-interacting protein 3 yes no 3;4 1.0478E-12 68.192 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 148590000 0 32194000 48327000 30761000 14230000 23077000 7863 1465 7970 35299;35300;35301;35302;35303 23290;23291;23292;23293;23294 23293 5 TLVSEGMLTSLRANVDRGK SCKGALYKTLVSEGML RANVDRGKRSSGKGNS K T L G K R 1 2 1 1 0 0 1 2 0 0 3 1 1 0 0 2 2 0 0 2 0 19 2 2046.0892 C9JA69;Q8WY36-2;Q8WY36 C9JA69 622 640 BBX HMG box transcription factor BBX yes no 3 0.015581 46.249 By matching By MS/MS By matching By matching By matching By matching 1 1 17632000 0 9212300 0 8419800 0 0 7864 238 7971 35304;35305 23295 23295 1 TLYEHYSGGESHNSSSSK NSILKAAKTLYEHYSG SHNSSSSKTFEKKRGK K T L S K T 0 0 1 0 0 0 2 2 2 0 1 1 0 0 0 6 1 0 2 0 0 18 0 1968.845 P33981-2;P33981 P33981-2 830 847 TTK Dual specificity protein kinase TTK yes no 3;4 5.9705E-09 94.487 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 2 2 2 2 28657000 1196600 1943300 9128600 3538200 4328500 8521500 7865 891 7972 35306;35307;35308;35309;35310;35311;35312;35313;35314;35315 23296;23297;23298;23299;23300;23301 23300 6 TLYISDSDKRK GKNYCTAKTLYISDSD ISDSDKRKHFMLSVKM K T L R K H 0 1 0 2 0 0 0 0 0 1 1 2 0 0 0 2 1 0 1 0 0 11 2 1324.6987 Q06330;D6R927;Q06330-5;Q06330-4;Q06330-6;Q06330-7;Q06330-3;Q06330-2;D6RBQ8;D6RA45;D6RCM1;D6R946;D6RB37 Q06330 127 137 RBPJ Recombining binding protein suppressor of hairless yes no 2;3 0.00063548 102.52 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 34384000 5179000 8172700 16873000 327180 3831900 0 7866 1042 7973 35316;35317;35318;35319;35320 23302;23303;23304;23305 23302 4 TMELNVGNEASFHGQER ESNLEKAKTMELNVGN ASFHGQERTKTGISEE K T M E R T 1 1 2 0 0 1 3 2 1 0 1 0 1 1 0 1 1 0 0 1 0 17 0 1917.8639 Q5UIP0-2;Q5UIP0;H7C2B5 Q5UIP0-2 1916 1932 RIF1 Telomere-associated protein RIF1 yes no 3 0.00054899 72.433 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 2 8621300 0 3582200 0 1270800 0 3768400 7867 1201 7974;7975 35321;35322;35323;35324;35325 23306;23307;23308;23309 23307 146 4 TMFAQVESDDEEAK AYSKTQPKTMFAQVES ESDDEEAKNEPEWKKR K T M A K N 2 0 0 2 0 1 3 0 0 0 0 1 1 1 0 1 1 0 0 1 0 14 0 1598.677 Q9NW82 Q9NW82 631 644 WDR70 WD repeat-containing protein 70 yes yes 2 0.0066263 53.946 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2739700 0 0 710960 0 474960 1553800 7868 1553 7976 35326;35327;35328 23310;23311 23310 2 TMLLLSR VTGASLRRTMLLLSRS RTMLLLSRSPEAQPKT R T M S R S 0 1 0 0 0 0 0 0 0 0 3 0 1 0 0 1 1 0 0 0 0 7 0 832.48406 P55265;P55265-4;E7ENU4;P55265-5 P55265 818 824 ADAR Double-stranded RNA-specific adenosine deaminase yes no 2 5.1846E-58 154.01 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 43110000 0 2141300 7404900 1311700 15884000 16368000 7869 352 7977 35329;35330;35331;35332;35333 23312;23313;23314;23315 23314 4 TMLLLSRSPEAQPK VTGASLRRTMLLLSRS RSPEAQPKTLPLTGST R T M P K T 1 1 0 0 0 1 1 0 0 0 3 1 1 0 2 2 1 0 0 0 0 14 1 1569.8549 P55265;P55265-4;E7ENU4;P55265-5 P55265 818 831 ADAR Double-stranded RNA-specific adenosine deaminase yes no 2;3 7.2697E-70 136.14 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 3 2 4 3 154220000 27593000 16960000 41835000 11800000 22578000 33455000 7870 352 7978;7979 35334;35335;35336;35337;35338;35339;35340;35341;35342;35343;35344;35345;35346;35347;35348;35349;35350 23316;23317;23318;23319;23320;23321;23322;23323;23324;23325 23319 37 8 TMQGSEVVNVLK IPSANPAKTMQGSEVV SEVVNVLKSLLSNLDE K T M L K S 0 0 1 0 0 1 1 1 0 0 1 1 1 0 0 1 1 0 0 3 0 12 0 1303.6806 Q8WUM4;E9PFU1 Q8WUM4 542 553 PDCD6IP Programmed cell death 6-interacting protein yes no 2 4.0315E-18 114.87 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 18013000 0 3737100 6385300 2613900 0 5277100 7871 429 7980 35351;35352;35353;35354 23326;23327;23328;23329 23329 2 TMSCSDKILR IRLGERLRTMSCSDKI SCSDKILRWNVLGLQG R T M L R W 0 1 0 1 1 0 0 0 0 1 1 1 1 0 0 2 1 0 0 0 0 10 1 1209.5846 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 1033 1042 ADAR Double-stranded RNA-specific adenosine deaminase no no 3 0.0098335 75.387 By matching By matching By matching By matching By matching By MS/MS 1 1295000 0 0 0 0 0 1295000 7872 352;968 7981 35355 23330 23330 1 TMSGRDCQAWDSQSPHAHGYIPSKFPNK NYEGKIAKTMSGRDCQ IPSKFPNKNLKMNYCR K T M N K N 2 1 1 2 1 2 0 2 2 1 0 2 1 1 3 4 1 1 1 0 0 28 2 3201.4509 CON__P06868 CON__P06868 207 234 yes yes 4;5;6 2.6075E-08 58.938 By MS/MS By matching By MS/MS By matching By matching By MS/MS 3 2 3 3 5 76849000 8842400 0 10738000 14877000 11334000 31057000 + 7873 295 7982;7983 35356;35357;35358;35359;35360;35361;35362;35363;35364;35365;35366;35367;35368;35369;35370;35371 23331;23332;23333;23334;23335;23336;23337 23336 27 5 TNAENEFVTIK YEDEINKRTNAENEFV ENEFVTIKKDVDGAYM R T N I K K 1 0 2 0 0 0 2 0 0 1 0 1 0 1 0 0 2 0 0 1 0 11 0 1264.6299 P04264;CON__P04264 P04264 278 288 KRT1 Keratin, type II cytoskeletal 1 yes no 2 0.0039728 79.492 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 24261000 0 14403000 412780 2620200 3714200 3110700 + 7874 789 7984 35372;35373;35374;35375;35376 23338;23339;23340 23338 3 TNAENEFVTIKK YEDEINKRTNAENEFV NEFVTIKKDVDGAYMT R T N K K D 1 0 2 0 0 0 2 0 0 1 0 2 0 1 0 0 2 0 0 1 0 12 1 1392.7249 P04264;CON__P04264 P04264 278 289 KRT1 Keratin, type II cytoskeletal 1 yes no 3 0.0019072 68.463 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 9247500 376170 2153300 3801900 1804400 0 1111600 + 7875 789 7985 35377;35378;35379;35380;35381 23341;23342;23343 23341 3 TNFRLLK FKPWKGLKTNFRLLKR KTNFRLLKRRLRESLQ K T N L K R 0 1 1 0 0 0 0 0 0 0 2 1 0 1 0 0 1 0 0 0 0 7 1 890.53379 Q9NRW3 Q9NRW3 176 182 APOBEC3C DNA dC->dU-editing enzyme APOBEC-3C yes yes 2 0.027303 92.47 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 509020000 0 84776000 46282000 15607000 52236000 310110000 7876 1537 7986 35382;35383;35384;35385;35386 23344;23345 23345 2 TNGLTKPAALAAAPAKPGGAGGSK SFSALVGRTNGLTKPA PGGAGGSKKLVIKNFR R T N S K K 7 0 1 0 0 0 0 5 0 0 2 3 0 0 3 1 2 0 0 0 0 24 2 2105.1593 Q13619 Q13619 18 41 CUL4A Cullin-4A yes yes 3 0.013841 41.275 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2503300 0 558420 722870 0 0 1222000 7877 1089 7987 35387;35388;35389 23346 23346 1 TNLDLGPTAPSLEKEK KGRGNLEKTNLDLGPT APSLEKEKTLCLSTPS K T N E K T 1 0 1 1 0 0 2 1 0 0 3 2 0 0 2 1 2 0 0 0 0 16 1 1711.8992 Q03164-2;Q03164;E9PQG7;E9PR05 Q03164-2 972 987 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 3 0.00023958 84.859 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 22148000 12404000 0 4546200 0 5197200 0 7878 464 7988 35390;35391;35392 23347;23348;23349 23349 3 TNPEIQSTLRK VQEGKARKTNPEIQST EIQSTLRKRLYLQ___ K T N R K R 0 1 1 0 0 1 1 0 0 1 1 1 0 0 1 1 2 0 0 0 0 11 1 1285.699 P31944 P31944 227 237 CASP14 Caspase-14;Caspase-14 subunit p19;Caspase-14 subunit p10 yes yes 3 0.00097934 89.9 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 13789000 0 2149200 4859400 1828200 1165400 3786800 7879 888 7989 35393;35394;35395;35396;35397 23350;23351 23350 2 TNPEYIYAPLKEIPPADIPKNK TRCIQACKTNPEYIYA PADIPKNKKLLTDGYA K T N N K K 2 0 2 1 0 0 2 0 0 3 1 3 0 0 5 0 1 0 2 0 0 22 2 2510.3421 O15226;G3V1N1 O15226 212 233 NKRF NF-kappa-B-repressing factor yes no 4 3.5274E-15 89.557 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 17323000 0 0 0 8370200 8952700 0 7880 578 7990 35398;35399 23352;23353 23352 2 TNPSPTNPFSSDLQK LENKSKQRTNPSPTNP PFSSDLQKTFEIEL__ R T N Q K T 0 0 2 1 0 1 0 0 0 0 1 1 0 1 3 3 2 0 0 0 0 15 0 1631.7791 P49757-4;P49757-2;P49757-3;P49757;B1P2N8;B1P2N7;B1P2N6;B1P2N5;G3V3Z8 P49757-4 572 586 NUMB Protein numb homolog yes no 2 0.0024433 66.215 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1953800 0 768670 0 0 0 1185200 7881 943 7991 35400;35401 23354;23355 23355 2 TNRELLDVKK TLNDTLAKTNRELLDV RELLDVKKKFEDINQE K T N K K K 0 1 1 1 0 0 1 0 0 0 2 2 0 0 0 0 1 0 0 1 0 10 2 1214.6983 F5H2B9;H0YNH8;G3XAG2;Q9BZF9 F5H2B9 770 779 UACA Uveal autoantigen with coiled-coil domains and ankyrin repeats yes no 3 0.03633 70.942 By MS/MS By matching By matching By matching By matching By matching 1 558680 558680 0 0 0 0 0 7882 512 7992 35402 23356 23356 1 TNRSSVKTPEPVVPTAPEPHPTTSTDQPVTPK TSRATRCRTNRSSVKT TDQPVTPKLTSRATRR R T N P K L 1 1 1 1 0 1 2 0 1 0 0 2 0 0 8 3 7 0 0 4 0 32 2 3394.7369 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7 Q14676 1601 1632 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 4 0.0015436 32.962 By MS/MS By matching By matching By matching By matching By matching 1 1323600 1323600 0 0 0 0 0 7883 1109 7993 35403 23357 23357 1 TNSQFLSGPQK PLESTWTKTNSQFLSG QFLSGPQKSSSPFTPL K T N Q K S 0 0 1 0 0 2 0 1 0 0 1 1 0 1 1 2 1 0 0 0 0 11 0 1205.6041 Q68CQ4 Q68CQ4 260 270 DIEXF Digestive organ expansion factor homolog yes yes 2 0.0042884 77.674 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 4385400 0 1104400 0 0 3281100 0 7884 1216 7994 35404;35405 23358;23359 23358 2 TNVVTMPTAHPR QCLTPGIRTNVVTMPT TMPTAHPRIAPKASMA R T N P R I 1 1 1 0 0 0 0 0 1 0 0 0 1 0 2 0 3 0 0 2 0 12 0 1322.6765 Q13428-7;E7ETY2;Q13428-6;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 1019 1030 TCOF1 Treacle protein no no 3 0.0035705 65.234 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 2 1 1 1 1 18235000 1813400 1536800 668740 1311200 6990000 5915300 7885 1082;383 7995 35406;35407;35408;35409;35410;35411;35412 23360;23361;23362;23363 23361 4 TNVVTMPTAHPRIAPK QCLTPGIRTNVVTMPT AHPRIAPKASMAGASS R T N P K A 2 1 1 0 0 0 0 0 1 1 0 1 1 0 3 0 3 0 0 2 0 16 1 1731.9454 Q13428-7;E7ETY2;Q13428-6;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 1019 1034 TCOF1 Treacle protein no no 3 0.035265 63.062 By MS/MS By matching By matching By matching By matching By matching 1 0 0 0 0 0 0 0 7886 1082;383 7996 35413 23364 23364 1 TPAAAAAMNLASPR AVNLADSRTPAAAAAM AMNLASPRTAVAPSAV R T P P R T 6 1 1 0 0 0 0 0 0 0 1 0 1 0 2 1 1 0 0 0 0 14 0 1340.6871 Q9UQ35;F5GWZ7 Q9UQ35 2261 2274 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.009118 51.727 By matching By matching By matching By matching By matching By MS/MS 1 1 1 106420000 104810000 720990 0 0 0 887420 7887 1623 7997 35414;35415;35416 23365;23366 23365 2 TPCNAGTFSQPEK TVKLWDPRTPCNAGTF GTFSQPEKVYTLSVSG R T P E K V 1 0 1 0 1 1 1 1 0 0 0 1 0 1 2 1 2 0 0 0 0 13 0 1435.6402 O43684-2;O43684;B4DDM6 O43684-2 127 139 BUB3 Mitotic checkpoint protein BUB3 yes no 2 0.0015783 74.78 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2539200 740480 912590 594960 291200 0 0 7888 719 7998 35417;35418;35419;35420 23367;23368;23369 23369 3 TPENFPCK QTPHKHNRTPENFPCK TPENFPCKNLEENYCR R T P C K N 0 0 1 0 1 0 1 0 0 0 0 1 0 1 2 0 1 0 0 0 0 8 0 991.44332 CON__P06868;P00747 CON__P06868 317 324 PLG Plasminogen;Plasmin heavy chain A;Activation peptide;Angiostatin;Plasmin heavy chain A, short form;Plasmin light chain B yes no 2 0.0028773 110.41 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 3018200 0 405790 0 0 744400 1868100 + 7889 295 7999 35421;35422;35423 23370;23371 23371 2 TPEPVVPTAPEPHPTTSTDQPVTPK RTNRSSVKTPEPVVPT TDQPVTPKLTSRATRR K T P P K L 1 0 0 1 0 1 2 0 1 0 0 1 0 0 8 1 6 0 0 3 0 25 0 2622.3177 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7 Q14676 1608 1632 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 3 8.0054E-05 53.998 By matching By matching By matching By matching By matching By MS/MS 1 1 1123100 0 452210 0 0 0 670940 7890 1109 8000 35424;35425 23372 23372 0 TPEVDDEALEK LACQCLVRTPEVDDEA VDDEALEKFDKALKAL R T P E K F 1 0 0 2 0 0 3 0 0 0 1 1 0 0 1 0 1 0 0 1 0 11 0 1244.5772 CON__P02754 CON__P02754 125 135 yes yes 2 1.2045E-127 164.48 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 82135000 13672000 21960000 9456300 7240400 11635000 18172000 + 7891 292 8001 35426;35427;35428;35429;35430;35431;35432 23373;23374;23375;23376;23377;23378;23379 23379 7 TPEVDDEALEKFDK LACQCLVRTPEVDDEA EALEKFDKALKALPMH R T P D K A 1 0 0 3 0 0 3 0 0 0 1 2 0 1 1 0 1 0 0 1 0 14 1 1634.7675 CON__P02754 CON__P02754 125 138 yes yes 2;3 0 253.97 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 1 1 1 1 103910000 32165000 9353800 45892000 1408200 3194500 11899000 + 7892 292 8002 35433;35434;35435;35436;35437;35438;35439;35440 23380;23381;23382;23383;23384;23385;23386;23387;23388;23389 23380 10 TPKGPSSVEDIK KKQEKTPKTPKGPSSV PSSVEDIKAKMQASIE K T P I K A 0 0 0 1 0 0 1 1 0 1 0 2 0 0 2 2 1 0 0 1 0 12 1 1256.6612 P06748-2;P06748;P06748-3 P06748-2 208 219 NPM1 Nucleophosmin yes no 3 0.0383 45.213 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2753800 420850 1021700 0 0 1311200 0 7893 801 8003 35441;35442;35443 23390 23390 1 TPKGPSSVEDIKAK KKQEKTPKTPKGPSSV SVEDIKAKMQASIEKG K T P A K M 1 0 0 1 0 0 1 1 0 1 0 3 0 0 2 2 1 0 0 1 0 14 2 1455.7933 P06748-2;P06748;P06748-3 P06748-2 208 221 NPM1 Nucleophosmin yes no 3 1.3052E-19 109.95 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 87622000 10965000 13688000 7827000 4118000 31776000 19248000 7894 801 8004 35444;35445;35446;35447;35448;35449 23391;23392;23393 23391 2 TPQAPASANLVGPR ANYPSSSRTPQAPASA SANLVGPRSAHATAPV R T P P R S 3 1 1 0 0 1 0 1 0 0 1 0 0 0 3 1 1 0 0 1 0 14 0 1377.7365 Q9UQ35;F5GWZ7 Q9UQ35 2329 2342 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 2.3235E-42 123.95 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 18313000 0 2967500 2191000 0 4773000 8381700 7895 1623 8005 35450;35451;35452;35453;35454 23394;23395;23396;23397;23398;23399 23398 6 TPQPSSPMDQMGK GGGQPLARTPQPSSPM SPMDQMGKMRPQPYGG R T P G K M 0 0 0 1 0 2 0 1 0 0 0 1 2 0 3 2 1 0 0 0 0 13 0 1402.6221 O14497-2;O14497 O14497-2 377 389 ARID1A AT-rich interactive domain-containing protein 1A yes no 2 0.009673 55.899 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2834600 0 341380 0 447190 872690 1173300 7896 694 8006 35455;35456;35457;35458 23400 23400 1 TPSSSPPITPPASETK SIRNWVTRTPSSSPPI TPPASETKIMSPRKAL R T P T K I 1 0 0 0 0 0 1 0 0 1 0 1 0 0 5 4 3 0 0 0 0 16 0 1595.8043 F5GZ90;Q9NZJ0;E7ERQ0 F5GZ90 466 481 DTL Denticleless protein homolog yes no 2 0.01703 62.861 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 7897 499 8007 35459 23401 23401 1 TPTAPAVNLAGAR AVNLADPRTPTAPAVN AVNLAGARTPAALAAL R T P A R T 4 1 1 0 0 0 0 1 0 0 1 0 0 0 2 0 2 0 0 1 0 13 0 1237.6779 Q9UQ35;F5GWZ7 Q9UQ35 2289 2301 SRRM2 Serine/arginine repetitive matrix protein 2 yes no 2 0.0012343 81.676 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2061000 455680 590780 0 0 0 1014500 7898 1623 8008 35460;35461;35462 23402;23403 23403 2 TPTCQSSTDCSPYAR FLRNLLPRTPTCQSST TDCSPYARILRSRRSP R T P A R I 1 1 0 1 2 1 0 0 0 0 0 0 0 0 2 3 3 0 1 0 0 15 0 1729.7036 O95235;B4DL79 O95235 857 871 KIF20A Kinesin-like protein KIF20A yes no 2 0.039773 37.913 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2827400 0 197340 325070 0 972050 1332900 7899 767 8009 35463;35464;35465;35466 23404 23404 1 TPTQTNGSNVPFKPR NPQTSAVRTPTQTNGS SNVPFKPRGREFSFEA R T P P R G 0 1 2 0 0 1 0 1 0 0 0 1 0 1 3 1 3 0 0 1 0 15 1 1642.8427 P78347-2;P78347-4;P78347-3;B4DH52;P78347 P78347-2 662 676 GTF2I General transcription factor II-I yes no 3 0.0086684 48.351 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 4349600 149200 1062700 762330 0 252380 2122900 7900 90 8010 35467;35468;35469;35470;35471 23405;23406 23405 2 TPVQYSQQQNSPQK LYEPAKMKTPVQYSQQ QQQNSPQKHKNKDLYT K T P Q K H 0 0 1 0 0 5 0 0 0 0 0 1 0 0 2 2 1 0 1 1 0 14 0 1631.7903 P46013;F5H4V4 P46013 347 360 MKI67 Antigen KI-67 yes no 2 0.0011059 84.173 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 9167000 735990 1373400 972940 546120 1959900 3578600 7901 919 8011 35472;35473;35474;35475;35476;35477 23407;23408;23409;23410 23408 4 TQAPAVATT HTRVSVQRTQAPAVAT QAPAVATT________ R T Q T T - 3 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 3 0 0 1 0 9 0 858.4447 P15880;H0YEN5;E9PQD7 P15880 285 293 RPS2 40S ribosomal protein S2 yes no 1 0.0086927 60.118 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1946300 629700 0 462080 263770 590750 0 7902 839 8012 35478;35479;35480;35481 23411;23412;23413;23414;23415 23412 5 TQASSSFQDSSQPAGK STVPSVTKTQASSSFQ DSSQPAGKAEGIREPK K T Q G K A 2 0 0 1 0 3 0 1 0 0 0 1 0 1 1 5 1 0 0 0 0 16 0 1624.7329 P46087;Q3KQS4;P46087-2 P46087 670 685 NOP2 Putative ribosomal RNA methyltransferase NOP2 yes no 2 1.8719E-37 114.96 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 2 1 1 1 1 1 23353000 6386500 1875800 1324200 1574200 9149100 3043200 7903 923 8013 35482;35483;35484;35485;35486;35487;35488 23416;23417;23418;23419;23420;23421 23416 6 TQATLKPKDHHQPLGR PAVLSPSKTQATLKPK DHHQPLGRAKGVEKQQ K T Q G R A 1 1 0 1 0 2 0 1 2 0 2 2 0 0 2 0 2 0 0 0 0 16 2 1825.9911 P46087;Q3KQS4;P46087-2 P46087 736 751 NOP2 Putative ribosomal RNA methyltransferase NOP2 yes no 4 0.020707 40.211 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 7398200 0 668200 693560 662520 3983500 1390400 7904 923 8014 35489;35490;35491;35492;35493 23422;23423;23424 23424 3 TQDNRNNNSQQDIDSENMKQK ENVFEVSKTQDNRNNN DSENMKQKTSATVQKD K T Q Q K T 0 1 5 3 0 4 1 0 0 1 0 2 1 0 0 2 1 0 0 0 0 21 2 2506.1103 Q8NFC6 Q8NFC6 1137 1157 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 4 0.029531 33.37 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 3852800 0 0 918260 370390 924320 1639800 7905 1325 8015 35494;35495;35496;35497 23425 23425 1 TQDPSSPGTTPPQAR VEGTPASRTQDPSSPG GTTPPQARQAPAPTVI R T Q A R Q 1 1 0 1 0 2 0 1 0 0 0 0 0 0 4 2 3 0 0 0 0 15 0 1538.7325 Q13112 Q13112 424 438 CHAF1B Chromatin assembly factor 1 subunit B yes yes 2 0.00045801 71.279 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 2886700 0 530260 601440 332180 0 1422900 7906 1069 8016 35498;35499;35500;35501 23426;23427 23427 2 TQEDKEPISENIEVSK KKGNFFFKTQEDKEPI SENIEVSKELQIPALS K T Q S K E 0 0 1 1 0 1 4 0 0 2 0 2 0 0 1 2 1 0 0 1 0 16 1 1844.9004 Q562F6-2;Q562F6 Q562F6-2 650 665 SGOL2 Shugoshin-like 2 yes no 3 0.020385 40.857 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 5739900 896150 1586900 985910 757570 133630 1379800 7907 1175 8017 35502;35503;35504;35505;35506;35507 23428;23429 23429 2 TQEDPKPFCVGSAPPSVDVTPTYTK GPAVTFGKTQEDPKPF DVTPTYTKDGADEAES K T Q T K D 1 0 0 2 1 1 1 1 0 0 0 2 0 1 5 2 4 0 1 3 0 25 1 2720.3003 Q6W2J9;Q6W2J9-4;Q6W2J9-2;H7BYY2;Q6W2J9-3;A1A564 Q6W2J9 917 941 BCOR BCL-6 corepressor yes no 3 0.011603 35.23 By matching By MS/MS By matching By matching By matching By matching 1 4451000 0 4451000 0 0 0 0 7908 1237 8018 35508 23430 23430 1 TQFLTTPISQAQK YAAQPALKTQFLTTPI TPISQAQKLAGAQQVQ K T Q Q K L 1 0 0 0 0 3 0 0 0 1 1 1 0 1 1 1 3 0 0 0 0 13 0 1461.7827 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91 Q96L91-4 2902 2914 EP400 E1A-binding protein p400 yes no 2 0.015732 68.044 By matching By MS/MS By matching By matching By matching By matching 1 1654400 0 1654400 0 0 0 0 7909 1405 8019 35509 23431 23431 0 TQIQSVEPYTK VEKDISGKTQIQSVEP QSVEPYTKQQLNNMSF K T Q T K Q 0 0 0 0 0 2 1 0 0 1 0 1 0 0 1 1 2 0 1 1 0 11 0 1292.6612 G8JLH9;P40763-2;P40763 G8JLH9 534 544 STAT3 Signal transducer and activator of transcription 3 yes no 2 0.0033321 83.182 By matching By MS/MS By matching By matching By matching By matching 1 1 1625800 415640 1210200 0 0 0 0 7910 602 8020 35510;35511 23432 23432 1 TQLEINGRNNLIQQK LHPPPHLKTQLEINGR RNNLIQQKNMAMLAQQ K T Q Q K N 0 1 3 0 0 3 1 1 0 2 2 1 0 0 0 0 1 0 0 0 0 15 1 1767.9591 Q9NR56-3;Q9NR56-4;E9PBW7;Q9NR56-6;C9JP00;Q9NR56-2;Q9NR56-5;Q9NR56;H7C4T5;Q86VM6;C9J4T8;Q9NUK0-4;Q9NUK0-3;Q9NUK0-2;B1AKI6;Q9NUK0;O95205;Q5VZF2-3;Q5VZF2-2;Q5VZF2;B4E3F7 Q9NR56-3 77 91 MBNL1;MBNL3;MBLL;MBNL2 Muscleblind-like protein 1;Muscleblind-like protein 3;Muscleblind-like protein 2 no no 3 0.00062153 81.904 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 76021000 13877000 14900000 15596000 4684100 7242800 19720000 7911 263;764 8021 35512;35513;35514;35515;35516;35517 23433;23434;23435;23436;23437 23437 5 TQLGQKPFTCSVCGK SGAVKNPKTQLGQKPF FTCSVCGKGFSQSANL K T Q G K G 0 0 0 0 2 2 0 2 0 0 1 2 0 1 1 1 2 0 0 1 0 15 1 1709.8229 P13682;B4DUB8 P13682 215 229 ZNF35 Zinc finger protein 35 yes no 3 0.017864 43.69 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 16696000 457850 2360500 2039600 2235500 4378900 5223300 7912 835 8022 35518;35519;35520;35521;35522;35523 23438;23439 23438 2 TQNQENTFPCKK KKTETFSKTQNQENTF ENTFPCKKCGR_____ K T Q K K C 0 0 2 0 1 2 1 0 0 0 0 2 0 1 1 0 2 0 0 0 0 12 1 1493.6933 Q6PJG2 Q6PJG2 1031 1042 ELMSAN1 ELM2 and SANT domain-containing protein 1 yes yes 3 0.010354 51.979 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 1 10164000 1224500 1715200 5559600 814560 0 849830 7913 1231 8023 35524;35525;35526;35527;35528 23440 23440 1 TQPSSGVDSAVGTLPATSPQSTSVQAK EAQPPVARTQPSSGVD QSTSVQAKGTNKLRKP R T Q A K G 3 0 0 1 0 3 0 2 0 0 1 1 0 0 3 6 4 0 0 3 0 27 0 2600.293 Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 1094 1120 TCOF1 Treacle protein yes no 2;3 5.8108E-40 100.04 By MS/MS By matching By matching By matching By MS/MS By matching 2 1 1 21416000 10034000 0 4079300 0 7302600 0 7914 1082 8024 35529;35530;35531;35532 23441;23442;23443 23443 3 TQPTVINNLK EAVKTLKKTQPTVINN PTVINNLKKGAVEDVI K T Q L K K 0 0 2 0 0 1 0 0 0 1 1 1 0 0 1 0 2 0 0 1 0 10 0 1126.6346 O15226;G3V1N1 O15226 514 523 NKRF NF-kappa-B-repressing factor yes no 2 0.026776 58.699 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 14023000 4626600 0 3749800 5646100 0 0 7915 578 8025 35533;35534;35535 23444;23445 23444 2 TQQAAQANITLQEQIEAIHK GHSGSMARTQQAAQAN EQIEAIHKAKGLVPED R T Q H K A 4 0 1 0 0 5 2 0 1 3 1 1 0 0 0 0 2 0 0 0 0 20 0 2234.1655 Q15459;F5H048;E9PAW1;H7C1L2 Q15459 512 531 SF3A1 Splicing factor 3A subunit 1 yes no 3 1.6392E-14 90.729 By matching By MS/MS By matching By matching By matching By matching 1 0 0 0 0 0 0 0 7916 1138 8026 35536 23446 23446 1 TQQAAQANITLQEQIEAIHKAK GHSGSMARTQQAAQAN IEAIHKAKGLVPEDDT R T Q A K G 5 0 1 0 0 5 2 0 1 3 1 2 0 0 0 0 2 0 0 0 0 22 1 2433.2976 Q15459;F5H048;E9PAW1;H7C1L2 Q15459 512 533 SF3A1 Splicing factor 3A subunit 1 yes no 4 0.023691 27.574 By matching By MS/MS By matching By matching By matching By matching 1 14981000 0 14981000 0 0 0 0 7917 1138 8027 35537 23447 23447 0 TQRWAEPGEPICVVCGR EPVKSFSKTQRWAEPG PICVVCGRYGEYICDK K T Q G R Y 1 2 0 0 2 1 2 2 0 1 0 0 0 0 2 0 1 1 0 2 0 17 1 2013.9513 B7Z5N6;Q5T1V6-2;Q5T1V6;Q5T1V5 B7Z5N6 97 113 DDX59 Probable ATP-dependent RNA helicase DDX59 yes no 3 0.027001 50.376 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 10414000 0 0 4244800 0 0 6169000 7918 190 8028 35538;35539 23448;23449 23448 1 TQSLPVTEK KKHQGVSKTQSLPVTE QSLPVTEKVTENQIPA K T Q E K V 0 0 0 0 0 1 1 0 0 0 1 1 0 0 1 1 2 0 0 1 0 9 0 1001.5393 Q9NQW6;Q9NQW6-2 Q9NQW6 483 491 ANLN Actin-binding protein anillin yes no 2 0.0065688 96.143 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 75775000 6642600 8368500 25687000 5420200 13352000 16305000 7919 1533 8029 35540;35541;35542;35543;35544;35545 23450 23450 1 TQSLPVTEKVTENQIPAK KKHQGVSKTQSLPVTE TENQIPAKNSSTEPKG K T Q A K N 1 0 1 0 0 2 2 0 0 1 1 2 0 0 2 1 3 0 0 2 0 18 1 1982.0684 Q9NQW6;Q9NQW6-2 Q9NQW6 483 500 ANLN Actin-binding protein anillin yes no 3 0.001817 55.437 By MS/MS By matching By matching By matching By matching By matching 1 1215500 1215500 0 0 0 0 0 7920 1533 8030 35546 23451 23451 1 TQSRPGGPPNPPGPSPK LREILKRRTQSRPGGP NPPGPSPKALAKMMGG R T Q P K A 0 1 1 0 0 1 0 3 0 0 0 1 0 0 7 2 1 0 0 0 0 17 1 1669.8536 B7ZM82;B3KVH1;O95785;O95785-2 B7ZM82 406 422 WIZ Protein Wiz yes no 3 0.0017341 69.069 By MS/MS By matching By MS/MS By matching By MS/MS By matching 2 2 1 1 2 1 11914000 2909700 950300 1371800 1194500 3389700 2097900 7921 212 8031 35547;35548;35549;35550;35551;35552;35553;35554;35555 23452;23453;23454 23453 3 TQSSLVEAFNK GGGTVISRTQSSLVEA SLVEAFNKILNSKNLL R T Q N K I 1 0 1 0 0 1 1 0 0 0 1 1 0 1 0 2 1 0 0 1 0 11 0 1222.6194 H0Y5I5;F8WCX2;Q8N1G0-2;Q8N1G0 H0Y5I5 96 106 ZNF687 Zinc finger protein 687 yes no 2 0.036415 49.448 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3752000 0 831090 0 283540 0 2637300 7922 568 8032 35556;35557;35558 23455 23455 1 TQTPNRKEWVTPK AWTKCMVKTQTPNRKE RKEWVTPKEFREISYL K T Q P K E 0 1 1 0 0 1 1 0 0 0 0 2 0 0 2 0 3 1 0 1 0 13 2 1583.842 P09874 P09874 325 337 PARP1 Poly [ADP-ribose] polymerase 1 yes yes 3 0.0069698 67.879 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 30747000 3516500 4026800 5029900 5569700 8120200 4483500 7923 815 8033 35559;35560;35561;35562;35563;35564 23456 23456 1 TQTPPVEENVTQK SSKSLEHKTQTPPVEE VEENVTQKISDLEICA K T Q Q K I 0 0 1 0 0 2 2 0 0 0 0 1 0 0 2 0 3 0 0 2 0 13 0 1469.7362 H7C4Z8;Q6P1Q9-2;Q6P1Q9 H7C4Z8 146 158 METTL2B Methyltransferase-like protein 2B yes no 2 0.015794 51.135 By matching By matching By matching By matching By matching By MS/MS 1 1083700 0 0 0 0 0 1083700 7924 673 8034 35565 23457 23457 1 TQTSMSLGTTR LAGFELRKTQTSMSLG SMSLGTTREKTDRVKS K T Q T R E 0 1 0 0 0 1 0 1 0 0 1 0 1 0 0 2 4 0 0 0 0 11 0 1181.571 Q8NB16 Q8NB16 355 365 MLKL Mixed lineage kinase domain-like protein yes yes 2 0.0025505 86.911 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 8015600 0 1121400 0 447640 1772800 4673800 7925 1314 8035 35566;35567;35568;35569 23458 23458 1 TQTSMSLGTTREK LAGFELRKTQTSMSLG SLGTTREKTDRVKSTA K T Q E K T 0 1 0 0 0 1 1 1 0 0 1 1 1 0 0 2 4 0 0 0 0 13 1 1438.7086 Q8NB16 Q8NB16 355 367 MLKL Mixed lineage kinase domain-like protein yes yes 3 0.001656 74.537 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 16825000 916880 0 3915200 206640 0 11786000 7926 1314 8036 35570;35571;35572;35573 23459;23460 23460 2 TQVAGGQLSFKGK KLAETLAKTQVAGGQL GQLSFKGKSLKLNTAE K T Q G K S 1 0 0 0 0 2 0 3 0 0 1 2 0 1 0 1 1 0 0 1 0 13 1 1319.7197 P46060;B0QYT6;B0QYT5;B0QYT4 P46060 16 28 RANGAP1 Ran GTPase-activating protein 1 yes no 2;3 3.1087E-91 147.33 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 2 2 147490000 34184000 19350000 28383000 16661000 24957000 23953000 7927 921 8037 35574;35575;35576;35577;35578;35579;35580;35581;35582;35583;35584;35585;35586;35587 23461;23462;23463;23464;23465;23466;23467;23468;23469;23470;23471;23472;23473;23474 23474 14 TQVEASEESALNHLQNPGDAAEGR DNMLIQIKTQVEASEE PGDAAEGRAAKRCEKA K T Q G R A 4 1 2 1 0 2 4 2 1 0 2 0 0 0 1 2 1 0 0 1 0 24 0 2522.1633 Q9Y605 Q9Y605 69 92 MRFAP1 MORF4 family-associated protein 1 yes yes 3 1.4407E-14 84.025 By matching By MS/MS By matching By matching By matching By matching 1 22131000 0 22131000 0 0 0 0 7928 1658 8038 35588 23475;23476 23476 2 TQVVAGTNYYIK KLEAVQYKTQVVAGTN AGTNYYIKVRAGDNKY K T Q I K V 1 0 1 0 0 1 0 1 0 1 0 1 0 0 0 0 2 0 2 2 0 12 0 1355.7085 P01040;C9J0E4 P01040 45 56 CSTA Cystatin-A;Cystatin-A, N-terminally processed yes no 2 0.034044 46.282 By matching By matching By MS/MS By matching By matching By matching 1 1 2724600 0 0 2087300 637270 0 0 7929 781 8039 35589;35590 23477 23477 1 TQYEELKAQQDK KKIGRRYKTQYEELKA ELKAQQDKVMETSAQS K T Q D K V 1 0 0 1 0 3 2 0 0 0 1 2 0 0 0 0 1 0 1 0 0 12 1 1479.7205 P12270 P12270 1443 1454 TPR Nucleoprotein TPR yes yes 3 0.0036351 69.229 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 2055300 1067400 0 0 987880 0 0 7930 827 8040 35591;35592 23478;23479;23480 23480 3 TRAEAEAAAVHGAR LHAVITFKTRAEAEAA AAAVHGARFKGQDLKL K T R A R F 6 2 0 0 0 0 2 1 1 0 0 0 0 0 0 0 1 0 0 1 0 14 1 1408.7171 Q5T8P6-5;Q5T8P6-4;Q5T8P6-3;Q5T8P6-2;Q5T8P6;E2PSN0 Q5T8P6-5 461 474 RBM26 RNA-binding protein 26 yes no 3 0.014637 47.639 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2168700 0 507620 428090 0 446580 786390 7931 1196 8041 35593;35594;35595;35596 23481 23481 1 TRDFKPGDLIFAK ________________ PGDLIFAKMKGYPHWP M T R A K M 1 1 0 2 0 0 0 1 0 1 1 2 0 2 1 0 1 0 0 0 0 13 2 1506.8195 O75475;O75475-2 O75475 2 14 PSIP1 PC4 and SFRS1-interacting protein yes no 3 1.5596E-131 149.82 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 104590000 18224000 36334000 0 50028000 0 0 7932 741 8042 35597;35598;35599;35600 23482;23483;23484;23485 23483 4 TRDSSDIETAVVK LLNNMHEKTRDSSDIE DIETAVVKHVLSELKE K T R V K H 1 1 0 2 0 0 1 0 0 1 0 1 0 0 0 2 2 0 0 2 0 13 1 1419.7205 Q96L73-2;Q96L73-3;Q96L73 Q96L73-2 577 589 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific yes no 3 0.0026697 64.798 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 3060400 0 767010 626200 184900 0 1482300 7933 1404 8043 35601;35602;35603;35604 23486;23487;23488 23488 3 TRELFVHGLPGSGK LLSKNLRKTRELFVHG HGLPGSGKTILALRIM K T R G K T 0 1 0 0 0 0 1 3 1 0 2 1 0 1 1 1 1 0 0 1 0 14 1 1496.81 Q08AF3 Q08AF3 571 584 SLFN5 Schlafen family member 5 yes yes 3 6.2045E-05 91.712 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 23011000 2245900 1010000 2334500 3352700 8405200 5663100 7934 1049 8044 35605;35606;35607;35608;35609;35610 23489;23490;23491;23492;23493;23494;23495 23495 7 TRETGLSYTEDDK PALKAPEKTRETGLSY LSYTEDDKKASPEHRI K T R D K K 0 1 0 2 0 0 2 1 0 0 1 1 0 0 0 1 3 0 1 0 0 13 1 1513.6896 Q13415 Q13415 296 308 ORC1 Origin recognition complex subunit 1 yes yes 2;3 0.0011021 90.689 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 2 1 1 2 11355000 733190 3266900 2327800 989500 404910 3632400 7935 1080 8045 35611;35612;35613;35614;35615;35616;35617;35618;35619 23496;23497;23498 23497 3 TRETGLSYTEDDKK PALKAPEKTRETGLSY SYTEDDKKASPEHRII K T R K K A 0 1 0 2 0 0 2 1 0 0 1 2 0 0 0 1 3 0 1 0 0 14 2 1641.7846 Q13415 Q13415 296 309 ORC1 Origin recognition complex subunit 1 yes yes 3;4 1.7929E-12 104.9 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 2 2 1 2 8534600 399420 960150 1704300 861250 1188400 3421000 7936 1080 8046 35620;35621;35622;35623;35624;35625;35626;35627;35628 23499;23500;23501;23502;23503;23504;23505;23506 23506 8 TRHDVGLPGVSR KFQILGRKTRHDVGLP VGLPGVSRARALRKRT K T R S R A 0 2 0 1 0 0 0 2 1 0 1 0 0 0 1 1 1 0 0 2 0 12 1 1292.6949 E9PFK5;P78316-2;P78316 E9PFK5 48 59 NOP14 Nucleolar protein 14 yes no 3 0.011277 58.098 By matching By matching By matching By matching By matching By MS/MS 1 726600 0 0 0 0 0 726600 7937 428 8047 35629 23507 23507 1 TRKQVSSHLQVLAR KLRTGKTRTRKQVSSH SHLQVLARRKSREIQS R T R A R R 1 2 0 0 0 2 0 0 1 0 2 1 0 0 0 2 1 0 0 2 0 14 2 1621.9376 H0Y3A6 H0Y3A6 102 115 yes yes 4 0.00099167 71.529 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 3679700 0 0 0 1112400 1139400 1428000 7938 606 8048 35630;35631;35632 23508;23509;23510 23508 3 TRLLQQNTQLK IFSLEQEKTRLLQQNT LQQNTQLKRFIQELSG K T R L K R 0 1 1 0 0 3 0 0 0 0 3 1 0 0 0 0 2 0 0 0 0 11 1 1341.7728 Q01664;I3L254 Q01664 104 114 TFAP4 Transcription factor AP-4 yes no 3 0.0034052 83.137 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 12574000 0 2834000 1590900 631860 1472800 6044500 7939 1029 8049 35633;35634;35635;35636;35637 23511;23512;23513 23512 3 TRPAANPIQFTLNKEK KTGMYYLRTRPAANPI QFTLNKEKLKDKEKVS R T R E K L 2 1 2 0 0 1 1 0 0 1 1 2 0 1 2 0 2 0 0 0 0 16 2 1827.0003 P23921;H0YFI0;E9PD78;E9PL69;F5H861 P23921 741 756 RRM1 Ribonucleoside-diphosphate reductase large subunit;Ribonucleoside-diphosphate reductase yes no 4 1.6011E-50 121.13 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 2 2 1 12715000 990710 1359200 1936600 0 3106200 5322300 7940 870 8050 35638;35639;35640;35641;35642;35643;35644 23514;23515;23516;23517;23518 23516 5 TRPLLNIRSDK ICDVQVHKTRPLLNIR LLNIRSDKTLQDIVYK K T R D K T 0 2 1 1 0 0 0 0 0 1 2 1 0 0 1 1 1 0 0 0 0 11 2 1311.7623 Q5T8Z5;Q5T8Z6;Q5T8Z4;Q5T8Z1;P35226 Q5T8Z5 63 73 BMI1 Polycomb complex protein BMI-1 yes no 3 0.018292 70.942 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 5759800 0 527000 433980 305140 1364700 3129000 7941 893 8051 35645;35646;35647;35648;35649 23519 23519 1 TRQAFFLHTTYFTK GSPKSAVKTRQAFFLH LHTTYFTKFARQVCKN K T R T K F 1 1 0 0 0 1 0 0 1 0 1 1 0 3 0 0 4 0 1 0 0 14 1 1759.9046 E7EQY4;Q9BTC8-2;D6W5A2;F8W8M8;E7EV10;Q9BTC8 E7EQY4 463 476 MTA3 Metastasis-associated protein MTA3 yes no 3 0.0015938 72.321 By matching By matching By matching By matching By matching By MS/MS 1 36115000 0 0 0 0 0 36115000 7942 331 8052 35650 23520 23520 0 TRQDGSQEAPEAPLSSELEPFHPKPK SIKPTVRKTRQDGSQE EPFHPKPKIRTRKSSR K T R P K I 2 1 0 1 0 2 4 1 1 0 2 2 0 1 5 3 1 0 0 0 0 26 2 2874.4148 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7;H0Y6Z8 Q14676 1081 1106 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 4;5 9.5646E-163 139.04 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 2 95524000 9498200 16502000 0 22230000 3584400 43710000 7943 1109 8053 35651;35652;35653;35654;35655;35656;35657;35658 23521;23522;23523;23524;23525;23526;23527;23528 23524 7 TRQVCPLDNREWEFQK HCISRWLKTRQVCPLD NREWEFQKYGH_____ K T R Q K Y 0 2 1 1 1 2 2 0 0 0 1 1 0 1 1 0 1 1 0 1 0 16 2 2105.0113 P62877 P62877 90 105 RBX1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes yes 3;4 0.0043852 50.305 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2 9002300 0 0 0 297370 1614000 7091000 7944 996 8054 35659;35660;35661;35662 23529;23530;23531 23531 3 TRSKDIFDQLAK AKIKKFSKTRSKDIFD DIFDQLAKSLAPSIHG K T R A K S 1 1 0 2 0 1 0 0 0 1 1 2 0 1 0 1 1 0 0 0 0 12 2 1420.7674 P25205 P25205 290 301 MCM3 DNA replication licensing factor MCM3 yes yes 3 1.3166E-06 101.39 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 22750000 2454700 3760100 6273900 2564600 2890900 4805500 7945 873 8055 35663;35664;35665;35666;35667;35668 23532;23533;23534;23535;23536 23534 5 TRSNPEGAEDRAVGAQASVGSR HSAEPRPRTRSNPEGA AQASVGSRSEGEGEAA R T R S R S 4 3 1 1 0 1 2 3 0 0 0 0 0 0 1 3 1 0 0 2 0 22 2 2214.0737 Q9NWV8-3;Q9NWV8 Q9NWV8-3 27 48 BABAM1 BRISC and BRCA1-A complex member 1 yes no 4 0.035842 31.314 By matching By matching By MS/MS By matching By matching By matching 1 1 1 2969100 0 1336300 1115600 0 517240 0 7946 1556 8056 35669;35670;35671 23537 23537 1 TRSQEQEVLER EMMDERPKTRSQEQEV QEQEVLERGGRFTRSQ K T R E R G 0 2 0 0 0 2 3 0 0 0 1 0 0 0 0 1 1 0 0 1 0 11 1 1373.6899 E7EQT4;Q9UKV3;Q9UKV3-5 E7EQT4 286 296 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 3 0.030506 51.463 By matching By matching By matching By matching By matching By MS/MS 1 1 749530 217520 0 0 0 0 532010 7947 364 8057 35672;35673 23538 23538 1 TSAALQTHFNEVHAK KGCNQVFKTSAALQTH HFNEVHAKRPQLPVSD K T S A K R 3 0 1 0 0 1 1 0 2 0 1 1 0 1 0 1 2 0 0 1 0 15 0 1652.8271 Q15911-2;Q15911 Q15911-2 459 473 ZFHX3 Zinc finger homeobox protein 3 yes no 3 0.00056523 74.789 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 7785000 792910 1250300 1445400 1195900 1320900 1779600 7948 1150 8058 35674;35675;35676;35677;35678;35679 23539;23540 23539 2 TSALSDETKNNWEVSALSR PCLDGYLKTSALSDET WEVSALSRAAQKGFNK K T S S R A 2 1 2 1 0 0 2 0 0 0 2 1 0 0 0 4 2 1 0 1 0 19 1 2107.0182 P78527;E7EUY0;P78527-2 P78527 802 820 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 2.09E-82 130.38 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 236930000 36204000 46256000 33643000 27567000 14441000 78815000 7949 1012 8059 35680;35681;35682;35683;35684;35685 23541;23542;23543;23544;23545 23545 2 TSASLEMNQGVSEER SPVEVFAKTSASLEMN NQGVSEERIHLGSSPK K T S E R I 1 1 1 0 0 1 3 1 0 0 1 0 1 0 0 3 1 0 0 1 0 15 0 1636.7363 Q9H410;B4DWT2;Q5JW53;Q5JW58 Q9H410 38 52 DSN1 Kinetochore-associated protein DSN1 homolog yes no 2 0.0027227 64.476 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 3220800 0 658210 0 494380 1299200 768990 7950 1488 8060 35686;35687;35688;35689 23546;23547;23548;23549 23546 3 TSCRLSGGLGAGSCR GLGGGSSRTSCRLSGG GLGAGSCRLGSAGGLG R T S C R L 1 2 0 0 2 0 0 4 0 0 2 0 0 0 0 3 1 0 0 0 0 15 1 1537.7089 Q04695;CON__Q04695 Q04695 27 41 KRT17 Keratin, type I cytoskeletal 17 yes no 3 0.00052713 72.433 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 11910000 1280100 1535600 1117700 7976100 0 0 + 7951 304 8061 35690;35691;35692;35693 23550;23551;23552 23552 3 TSDANETEDHLESLICK GQPHKRRKTSDANETE HLESLICKVGEKSACS K T S C K V 1 0 1 2 1 0 3 0 1 1 2 1 0 0 0 2 2 0 0 0 0 17 0 1960.8684 Q09161;F2Z2T1 Q09161 21 37 NCBP1 Nuclear cap-binding protein subunit 1 yes no 3 0.0018934 53.924 By matching By matching By matching By MS/MS By matching By matching 1 6319900 0 0 0 6319900 0 0 7952 1052 8062 35694 23553 23553 1 TSDAPYDSADDWSEHISSSGK NPSNNPSKTSDAPYDS EHISSSGKKYYYNCRT K T S G K K 2 0 0 4 0 0 1 1 1 1 0 1 0 0 1 6 1 1 1 0 0 21 0 2253.9298 Q9BTA9-2;Q9BTA9;Q9BTA9-5;B4DMH1;Q9BTA9-3;C9JVK6;C9JD58 Q9BTA9-2 79 99 WAC WW domain-containing adapter protein with coiled-coil yes no 3 2.6779E-05 59.983 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 5703100 0 2080000 0 0 0 3623100 7953 1446 8063 35695;35696 23554;23555;23556 23555 2 TSDFNTFLAQEGCTKGK YWSCCRRKTSDFNTFL QEGCTKGKHMWTKKDA K T S G K H 1 0 1 1 1 1 1 2 0 0 1 2 0 2 0 1 3 0 0 0 0 17 1 1902.8782 E9PHZ2;Q9UHD1-2;Q9UHD1 E9PHZ2 11 27 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 yes no 3 0.0016449 58.712 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 7602800 0 3098300 0 1435500 0 3069100 7954 442 8064 35697;35698;35699 23557;23558 23557 2 TSDGQFSL MCQGCQSKTSDGQFSL TSDGQFSL________ K T S S L - 0 0 0 1 0 1 0 1 0 0 1 0 0 1 0 2 1 0 0 0 0 8 0 853.38176 Q8NDX6 Q8NDX6 186 193 ZNF740 Zinc finger protein 740 yes yes 1 0.0074194 69.998 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 31807000 0 4620700 22768000 0 4417700 0 7955 1320 8065 35700;35701;35702 23559;23560 23559 2 TSDIFGSPVTATSR HLNPPGGKTSDIFGSP SPVTATSRLAHPNKPK K T S S R L 1 1 0 1 0 0 0 1 0 1 0 0 0 1 1 3 3 0 0 1 0 14 0 1437.71 Q9H910;B4DLH4;H3BU16;Q9H910-2;A6NGP5;H3BMV3;B4DL85;H3BMT0;H3BTV5 Q9H910 91 104 HN1L Hematological and neurological expressed 1-like protein yes no 2 0.0011058 76.358 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 17568000 0 3242400 0 756580 0 13569000 7956 98 8066 35703;35704;35705 23561;23562 23562 2 TSDTETEPSKTVSTANR KMTSLETKTSDTETEP KTVSTANRSGRSTEFR K T S N R S 1 1 1 1 0 0 2 0 0 0 0 1 0 0 1 3 5 0 0 1 0 17 1 1822.8545 P46013;F5H4V4;P46013-2 P46013 858 874 MKI67 Antigen KI-67 no no 3 3.7049E-73 126.07 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 16646000 0 4696900 2513200 1714500 2460300 5260800 7957 919;920 8067 35706;35707;35708;35709;35710 23563;23564;23565 23563 3 TSDTETEPSKTVSTANRSGR KMTSLETKTSDTETEP STANRSGRSTEFRNIQ K T S G R S 1 2 1 1 0 0 2 1 0 0 0 1 0 0 1 4 5 0 0 1 0 20 2 2123.0091 P46013;F5H4V4;P46013-2 P46013 858 877 MKI67 Antigen KI-67 no no 4 0.0027342 47.904 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 24221000 3065500 3818100 6819700 2584300 2993500 4939800 7958 919;920 8068 35711;35712;35713;35714;35715;35716 23566 23566 1 TSEDQAAILPGK DIPLKTRKTSEDQAAI QAAILPGKLELCSDDQ K T S G K L 2 0 0 1 0 1 1 1 0 1 1 1 0 0 1 1 1 0 0 0 0 12 0 1228.6299 Q12968-5;Q12968-6;Q12968-4;I3L3K7;H3BR83;H3BRS1;Q12968-3;Q12968-2;Q12968 Q12968-5 343 354 NFATC3 Nuclear factor of activated T-cells, cytoplasmic 3 yes no 2 0.0035603 69.261 By matching By matching By matching By matching By MS/MS By matching 1 580580 0 0 0 0 580580 0 7959 643 8069 35717 23567 23567 1 TSEISIPADLDK DIPVQSHRTSEISIPA SIPADLDKTITELADW R T S D K T 1 0 0 2 0 0 1 0 0 2 1 1 0 0 1 2 1 0 0 0 0 12 0 1287.6558 P46939 P46939 2222 2233 UTRN Utrophin yes yes 2 0.001336 91.469 By matching By matching By matching By matching By MS/MS By matching 1 1716800 0 0 0 0 1716800 0 7960 928 8070 35718 23568 23568 1 TSEVDLAKPLVK FISVQLKKTSEVDLAK DLAKPLVKFIQQTYPS K T S V K F 1 0 0 1 0 0 1 0 0 0 2 2 0 0 1 1 1 0 0 2 0 12 1 1298.7446 Q8WUM4;E9PFU1;F8WEQ7;F8WBR8;C9IZF9 Q8WUM4 12 23 PDCD6IP Programmed cell death 6-interacting protein yes no 2 1.3716E-11 109.39 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 2983700 477780 763230 611990 252920 0 877800 7961 429 8071 35719;35720;35721;35722;35723 23569;23570 23570 2 TSEVIEDEK ________________ SEVIEDEKQFYSKAKT M T S E K Q 0 0 0 1 0 0 3 0 0 1 0 1 0 0 0 1 1 0 0 1 0 9 0 1048.4924 Q9BV86-2;Q9BV86 Q9BV86-2 2 10 NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1;N-terminal Xaa-Pro-Lys N-methyltransferase 1, N-terminally processed yes no 2 0.0032299 104.05 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 8831100 383370 1478600 1664000 517720 1464700 3322700 7962 1453 8072 35724;35725;35726;35727;35728;35729;35730 23571;23572;23573;23574;23575;23576;23577 23574 7 TSEVNCYRCGESGHLAR HVAINCSKTSEVNCYR GESGHLARECTIEATA K T S A R E 1 2 1 0 2 0 2 2 1 0 1 0 0 0 0 2 1 0 1 1 0 17 1 1994.8687 B4DP17;P62633-3;P62633-2;P62633;P62633-5;E9PDR7;P62633-4 B4DP17 136 152 CNBP Cellular nucleic acid-binding protein no no 3;4 1.1176E-31 107.74 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 4 2 2 2 2 2 106200000 25941000 15196000 21135000 14712000 12787000 16433000 7963 112;992 8073 35731;35732;35733;35734;35735;35736;35737;35738;35739;35740;35741;35742;35743;35744 23578;23579;23580;23581;23582;23583;23584;23585;23586;23587;23588;23589 23585 12 TSFEIAELKER KLEAAKKKTSFEIAEL EIAELKERLKASRETI K T S E R L 1 1 0 0 0 0 3 0 0 1 1 1 0 1 0 1 1 0 0 0 0 11 1 1321.6878 F8W0J4;O95619 F8W0J4 136 146 YEATS4 YEATS domain-containing protein 4 yes no 3 0.029174 77.288 By matching By matching By MS/MS By matching By matching By matching 1 0 0 0 0 0 0 0 7964 550 8074 35745 23590 23590 1 TSFFLGEVGNAAK SCFQAMGKTSFFLGEV GEVGNAAKMMLIVNMV K T S A K M 2 0 1 0 0 0 1 2 0 0 1 1 0 2 0 1 1 0 0 1 0 13 0 1339.6772 Q49A26-2;Q49A26;Q49A26-3;Q49A26-4;Q49A26-5 Q49A26-2 406 418 GLYR1 Putative oxidoreductase GLYR1 no no 2 0.0018191 81.789 By matching By matching By matching By matching By MS/MS By matching 1 59952000 0 0 0 0 59952000 0 7965 1168;1169 8075 35746 23591 23591 1 TSFTQEQIEALEK KRKLQRNRTSFTQEQI EQIEALEKEFERTHYP R T S E K E 1 0 0 0 0 2 3 0 0 1 1 1 0 1 0 1 2 0 0 0 0 13 0 1522.7515 P26367;G3V3Q9;E9PS79;G3V567;G3V5W7;E9PIX4;G3V4N4;G3V4M3;P26367-2 P26367 215 227 PAX6 Paired box protein Pax-6 no no 2 6.4773E-210 173.06 By matching By MS/MS By matching By matching By matching By matching 1 10197000 0 10197000 0 0 0 0 7966 877;878 8076 35747 23592 23592 1 TSFTSVSR AITPSVSRTSFTSVSR TSFTSVSRSGGGGGGG R T S S R S 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 3 2 0 0 1 0 8 0 883.43995 P13647;CON__P13647;F8VV57;E7EU87;CON__Q5XQN5;F8VU69 P13647 30 37 KRT5 Keratin, type II cytoskeletal 5 yes no 2 0.012377 90.601 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 11603000 1009100 1720900 2806300 3671600 971470 1423500 + 7967 299 8077 35748;35749;35750;35751;35752;35753 23593;23594;23595 23593 3 TSFVCTYCSK GIKKEKPKTSFVCTYC FVCTYCSKAFRDSYHL K T S S K A 0 0 0 0 2 0 0 0 0 0 0 1 0 1 0 2 2 0 1 1 0 10 0 1251.5264 Q14119 Q14119 72 81 VEZF1 Vascular endothelial zinc finger 1 yes yes 2 2.4482E-48 141.91 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 1 2 1 2 217220000 57907000 22380000 14688000 21156000 47900000 53184000 7968 1094 8078 35754;35755;35756;35757;35758;35759;35760;35761;35762 23596;23597;23598;23599;23600 23600 5 TSGAFVYDCSKF PSSQSLYRTSGAFVYD FVYDCSKF________ R T S K F - 1 0 0 1 1 0 0 1 0 0 0 1 0 2 0 2 1 0 1 1 0 12 1 1380.602 Q12948 Q12948 542 553 FOXC1 Forkhead box protein C1 yes yes 2 0.0096003 89.44 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 47231000 0 18632000 10944000 10916000 6737900 0 7969 1065 8079 35763;35764;35765;35766 23601;23602 23602 2 TSGETTQTHTEPTGDSKSIK LAVSKLTRTSGETTQT TGDSKSIKAFKESPKQ R T S I K A 0 0 0 1 0 1 2 2 1 1 0 2 0 0 1 3 6 0 0 0 0 20 1 2103.992 P46013;F5H4V4;P46013-2 P46013 2504 2523 MKI67 Antigen KI-67 no no 3;4 0.0064645 44.238 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 2 1 1 2 14328000 1827300 2426000 0 1062700 1779500 7232100 7970 919;920 8080 35767;35768;35769;35770;35771;35772;35773 23603;23604;23605;23606 23606 4 TSGFRPIAKPAYSPASWSSR SQGLSGDKTSGFRPIA SPASWSSRSAVDLSCS K T S S R S 3 2 0 0 0 0 0 1 0 1 0 1 0 1 3 5 1 1 1 0 0 20 2 2165.1018 Q9Y446;E9PK71 Q9Y446 103 122 PKP3 Plakophilin-3 yes no 4 0.00034682 59.618 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 19298000 0 2862600 0 1616600 0 14819000 7971 1650 8081 35774;35775;35776 23607;23608;23609 23609 3 TSGIINKFCSAK SNFCSEQKTSGIINKF INKFCSAKDSEHNEKY K T S A K D 1 0 1 0 1 0 0 1 0 2 0 2 0 1 0 2 1 0 0 0 0 12 1 1324.6809 O95243-2 O95243-2 329 340 MBD4 Methyl-CpG-binding domain protein 4 no no 2;3 0.0050472 87.216 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 2 2 2 15223000 0 2142200 3729300 4163800 2668800 2518800 7972 769 8082 35777;35778;35779;35780;35781;35782;35783;35784;35785;35786;35787 23610;23611;23612;23613;23614;23615;23616;23617 23612 8 TSGNSQREYQLMK ELIKPMERTSGNSQRE QREYQLMKLLLDNTQI R T S M K L 0 1 1 0 0 2 1 1 0 0 1 1 1 0 0 2 1 0 1 0 0 13 1 1540.7304 O43929;B7Z632;B7Z3D0;F5H069 O43929 391 403 ORC4;ORC4L Origin recognition complex subunit 4 yes no 3 0.03283 43.897 By matching By matching By matching By matching By matching By MS/MS 1 2883500 0 0 0 0 0 2883500 7973 725 8083 35788 23618 23618 1 TSGQTFANSNSSR IDMGSACRTSGQTFAN FANSNSSRSHACFQII R T S S R S 1 1 2 0 0 1 0 1 0 0 0 0 0 1 0 4 2 0 0 0 0 13 0 1355.6066 B7Z6Q6;Q99661;Q99661-2;B7Z7M6 B7Z6Q6 416 428 KIF2C Kinesin-like protein KIF2C yes no 2 0.036805 42.317 By matching By matching By MS/MS By matching By matching By matching 1 753320 0 0 753320 0 0 0 7974 193 8084 35789 23619 23619 1 TSGRVAVEEVDEEGK SSFSQHARTSGRVAVE EEVDEEGKFVRLRNKS R T S G K F 1 1 0 1 0 0 4 2 0 0 0 1 0 0 0 1 1 0 0 3 0 15 1 1603.7689 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q5TCI8 P02545 436 450 LMNA Prelamin-A/C;Lamin-A/C yes no 2;3 8.0759E-31 117.53 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 2 1 1 2 2 37241000 3271800 12654000 6198000 4311000 2762400 8043800 7975 783 8085 35790;35791;35792;35793;35794;35795;35796;35797;35798 23620;23621;23622;23623;23624 23620 5 TSGRVAVEEVDEEGKFVR SSFSQHARTSGRVAVE DEEGKFVRLRNKSNED R T S V R L 1 2 0 1 0 0 4 2 0 0 0 1 0 1 0 1 1 0 0 4 0 18 2 2006.0069 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q5TCI8 P02545 436 453 LMNA Prelamin-A/C;Lamin-A/C yes no 4 0.001405 58.688 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 11350000 1545100 2810100 3059600 625480 1239800 2069900 7976 783 8086 35799;35800;35801;35802;35803;35804 23625;23626;23627 23627 3 TSGSVYITLKK TRLFQKCRTSGSVYIT SVYITLKKYDGRTKPI R T S K K Y 0 0 0 0 0 0 0 1 0 1 1 2 0 0 0 2 2 0 1 1 0 11 1 1195.6812 P37108;H0YLA2 P37108 22 32 SRP14 Signal recognition particle 14 kDa protein yes no 2 6.7628E-41 131.12 By MS/MS By matching By matching By MS/MS By matching By MS/MS 2 1 1 1 1 1 11427000 3248200 1114700 1419500 1025200 2294500 2325100 7977 903 8087 35805;35806;35807;35808;35809;35810;35811 23628;23629;23630 23629 2 TSGTEPADFALPSSR GAGPLRGKTSGTEPAD DFALPSSRGGPGKLSP K T S S R G 2 1 0 1 0 0 1 1 0 0 1 0 0 1 2 3 2 0 0 0 0 15 0 1534.7264 Q12888;Q12888-2;A6NNK5;F8VY86 Q12888 1341 1355 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.0015552 68.481 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 15990000 0 1365800 5327900 0 1337900 7958100 7978 1063 8088 35812;35813;35814;35815 23631;23632;23633 23631 3 TSGTEPADFALPSSRGGPGK GAGPLRGKTSGTEPAD SSRGGPGKLSPRKGVS K T S G K L 2 1 0 1 0 0 1 4 0 0 1 1 0 1 3 3 2 0 0 0 0 20 1 1930.9385 Q12888;Q12888-2;A6NNK5;F8VY86 Q12888 1341 1360 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 3.0462E-11 93.427 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 26386000 3197200 5244900 4660000 4176400 3362600 5745000 7979 1063 8089 35816;35817;35818;35819;35820;35821 23634;23635;23636;23637;23638 23636 4 TSHLAALLK ACAAPGNKTSHLAALL SHLAALLKNQGKIFAF K T S L K N 2 0 0 0 0 0 0 0 1 0 3 1 0 0 0 1 1 0 0 0 0 9 0 952.57057 C9JJU9;Q96P11-2;G3V0G9;Q96P11;Q96P11-4;Q96P11-3;Q63ZY6;Q63ZY6-5;Q63ZY6-6;Q63ZY6-2 C9JJU9 203 211 NSUN5;NSUN5P2 Putative methyltransferase NSUN5;Putative methyltransferase NSUN5C yes no 2 0.014268 78.264 By matching By matching By matching By matching By matching By MS/MS 1 1 2532100 0 1074000 0 0 0 1458100 7980 255 8090 35822;35823 23639 23639 1 TSHPVVASTWPVHR SDLTHPMKTSHPVVAS ASTWPVHRARAVSPAP K T S H R A 1 1 0 0 0 0 0 0 2 0 0 0 0 0 2 2 2 1 0 3 0 14 0 1572.8161 Q9P275;Q9P275-2;E9PEW0 Q9P275 724 737 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 2;3 6.0762E-20 107.65 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 3 54869000 4225900 6019100 3605400 3074200 7520800 30423000 7981 1576 8091 35824;35825;35826;35827;35828;35829;35830;35831 23640;23641;23642;23643;23644 23644 5 TSHPVVASTWPVHRAR SDLTHPMKTSHPVVAS TWPVHRARAVSPAPQS K T S A R A 2 2 0 0 0 0 0 0 2 0 0 0 0 0 2 2 2 1 0 3 0 16 1 1799.9543 Q9P275;Q9P275-2;E9PEW0 Q9P275 724 739 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 4 0.0011901 79.875 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 14472000 1695800 2053900 3298300 2230500 3004300 2188800 7982 1576 8092 35832;35833;35834;35835;35836;35837 23645;23646;23647;23648;23649;23650 23647 6 TSHSSTEACCELCGLYFENRK KAKTLHEKTSHSSTEA GLYFENRKALASHARA K T S R K A 1 1 1 0 3 0 3 1 1 0 2 1 0 1 0 3 2 0 1 0 0 21 1 2548.0781 B7ZM82;B3KVH1;O95785;O95785-2 B7ZM82 704 724 WIZ Protein Wiz yes no 3;4 1.4186E-91 126.8 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 85881000 29168000 7679100 37510000 2916000 8608100 0 7983 212 8093 35838;35839;35840;35841;35842 23651;23652;23653;23654 23652 4 TSIEVKATENCAK IPENSEIKTSIEVKAT KATENCAKEAISDAAL K T S A K E 2 0 1 0 1 0 2 0 0 1 0 2 0 0 0 1 2 0 0 1 0 13 1 1449.7133 Q14966-3;Q14966;Q14966-4 Q14966-3 869 881 ZNF638 Zinc finger protein 638 yes no 2;3 0.0092259 57.567 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1938800 677530 0 712080 549170 0 0 7984 1118 8094 35843;35844;35845 23655;23656;23657 23656 3 TSILAVSDVSSSKPSIK NKPDETSKTSILAVSD SSSKPSIKAVIVSSPK K T S I K A 1 0 0 1 0 0 0 0 0 2 1 2 0 0 1 6 1 0 0 2 0 17 1 1717.9462 Q14966-3;Q14966;Q14966-5;F5H6M8;E7EUZ3 Q14966-3 1379 1395 ZNF638 Zinc finger protein 638 yes no 3 3.5568E-08 94.007 By matching By matching By matching By MS/MS By matching By matching 1 5001200 0 0 0 5001200 0 0 7985 1118 8095 35846 23658 23658 1 TSLAGDTSNSSSPASTGAK TPTFHSSRTSLAGDTS SPASTGAKTNRADPKK R T S A K T 3 0 1 1 0 0 0 2 0 0 1 1 0 0 1 6 3 0 0 0 0 19 0 1737.8017 F5GZS2;H0Y6T5;H0Y4F5;H0Y314;H0Y390;Q9UPN3-4;F5GZL7;Q9UPN3-3;Q9UPN3-2;F8W8Q1;Q9UPN3-5;Q9UPN3;H3BPE1;H3BQK9 F5GZS2 237 255 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 yes no 2 0.0008819 61.87 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 3210600 486980 543290 640320 0 409550 1130400 7986 501 8096 35847;35848;35849;35850;35851 23659;23660;23661;23662 23661 4 TSLEASMEASPK AMVKASPKTSLEASME ASMEASPKAKARDAPK K T S P K A 2 0 0 0 0 0 2 0 0 0 1 1 1 0 1 3 1 0 0 0 0 12 0 1249.586 Q8IWC1-2;Q8IWC1;H7BY77;Q8IWC1-3 Q8IWC1-2 411 422 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.025892 49.356 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 3259800 0 355410 372960 324880 488830 1717700 7987 1280 8097 35852;35853;35854;35855;35856 23663 23663 1 TSLSANNATLEK LNAALREKTSLSANNA ANNATLEKQLIELTRT K T S E K Q 2 0 2 0 0 0 1 0 0 0 2 1 0 0 0 2 2 0 0 0 0 12 0 1247.6357 E5RIH2;E5RI30;E7EX27;E3W978;O75330-4;O75330-2;O75330;O75330-3 E5RIH2 13 24 HMMR Hyaluronan mediated motility receptor yes no 2 0.0017943 78.705 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 6675400 0 1049700 988190 1002900 2183800 1450700 7988 335 8098 35857;35858;35859;35860;35861 23664;23665 23664 2 TSLYFSSK RTQIERRKTSLYFSSK TSLYFSSKYNKEALSP K T S S K Y 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 3 1 0 1 0 0 8 0 931.4651 O95243-2 O95243-2 408 415 MBD4 Methyl-CpG-binding domain protein 4 no no 2 0.014732 87.639 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 12893000 1212000 1123600 0 1448500 3698600 5410200 7989 769 8099 35862;35863;35864;35865;35866 23666;23667 23666 2 TSLYFSSKYNK RTQIERRKTSLYFSSK YFSSKYNKEALSPPRR K T S N K E 0 0 1 0 0 0 0 0 0 0 1 2 0 1 0 3 1 0 2 0 0 11 1 1336.6663 O95243-2 O95243-2 408 418 MBD4 Methyl-CpG-binding domain protein 4 no no 2 0.0023243 93.839 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 10124000 1355900 1171800 1420100 1987900 2196500 1991600 7990 769 8100 35867;35868;35869;35870;35871;35872 23668;23669 23668 2 TSNEVQYDQRLFNQSK ALGVPNPRTSNEVQYD QRLFNQSKGMDSGFAG R T S S K G 0 1 2 1 0 3 1 0 0 0 1 1 0 1 0 2 1 0 1 1 0 16 1 1955.9337 Q13573;G3V3A4;G3V4X8 Q13573 401 416 SNW1 SNW domain-containing protein 1 yes no 2;3 0.0012911 76.574 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 2 23711000 2754400 5318200 2642200 1001700 1888500 10106000 7991 583 8101 35873;35874;35875;35876;35877;35878;35879 23670;23671;23672;23673;23674 23671 5 TSNFVPSSANMQYQGQQMK SISNVQPKTSNFVPSS QYQGQQMKALKHLRQT K T S M K A 1 0 2 0 0 4 0 1 0 0 0 1 2 1 1 3 1 0 1 1 0 19 0 2144.9619 H0Y3K4;Q96EV2 H0Y3K4 662 680 RBM33 RNA-binding protein 33 yes no 2 0.00014412 82.01 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 9817100 0 496550 4321800 0 2083000 2915800 7992 607 8102 35880;35881;35882;35883 23675;23676 23676 2 TSNIRANFENLAK PVEAVTSKTSNIRANF ANFENLAKEKEQEDRR K T S A K E 2 1 3 0 0 0 1 0 0 1 1 1 0 1 0 1 1 0 0 0 0 13 1 1476.7685 Q14247;Q14247-3;Q14247-2;E9PKG3;E9PP90;B4E358;H0YCD9 Q14247 347 359 CTTN Src substrate cortactin yes no 3 0.015555 51.463 By matching By MS/MS By matching By matching By matching By matching 1 1 1 2795800 1096000 918370 781400 0 0 0 7993 1104 8103 35884;35885;35886 23677 23677 1 TSPASLDFPESQK KLSPDQRKTSPASLDF LDFPESQKSSRGGSPD K T S Q K S 1 0 0 1 0 1 1 0 0 0 1 1 0 1 2 3 1 0 0 0 0 13 0 1405.6725 Q96JM3 Q96JM3 458 470 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 yes yes 2 0.00074044 92.151 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 2 1 1 1 1 35875000 6494900 6019800 6334600 4830100 4159700 8035700 7994 1399 8104 35887;35888;35889;35890;35891;35892;35893 23678;23679;23680;23681;23682;23683 23683 6 TSPEMDIQNPDDGAR RNEKKPMKTSPEMDIQ QNPDDGARKPIPRDKV K T S A R K 1 1 1 3 0 1 1 1 0 1 0 0 1 0 2 1 1 0 0 0 0 15 0 1644.705 P46013;F5H4V4;P46013-2 P46013 3127 3141 MKI67 Antigen KI-67 no no 2 0.0029233 58.079 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4606600 0 1816200 587740 0 868810 1333800 7995 919;920 8105 35894;35895;35896;35897 23684;23685 23684 2 TSPEMDIQNPDDGARKPIPR RNEKKPMKTSPEMDIQ GARKPIPRDKVTENKR K T S P R D 1 2 1 3 0 1 1 1 0 2 0 1 1 0 4 1 1 0 0 0 0 20 2 2236.0906 P46013;F5H4V4;P46013-2 P46013 3127 3146 MKI67 Antigen KI-67 no no 3;4 0.0010899 60.541 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 3 4 4 3 4 4 279480000 51188000 44955000 39804000 13571000 40582000 89379000 7996 919;920 8106;8107 35898;35899;35900;35901;35902;35903;35904;35905;35906;35907;35908;35909;35910;35911;35912;35913;35914;35915;35916;35917;35918;35919 23686;23687;23688;23689;23690;23691;23692;23693;23694;23695 23690 109 10 TSPENVQDRFALVTPK AETVFTPKTSPENVQD RFALVTPKKEGHWDCS K T S P K K 1 1 1 1 0 1 1 0 0 0 1 1 0 1 2 1 2 0 0 2 0 16 1 1800.937 P49792 P49792 1399 1414 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 3 0.00011761 87.083 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 76223000 32782000 13357000 13220000 12990000 3874400 0 7997 945 8108 35920;35921;35922;35923;35924 23696;23697;23698 23698 3 TSPENVQDRFALVTPKK AETVFTPKTSPENVQD FALVTPKKEGHWDCSI K T S K K E 1 1 1 1 0 1 1 0 0 0 1 2 0 1 2 1 2 0 0 2 0 17 2 1929.032 P49792 P49792 1399 1415 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes yes 3;4 0.0084573 48.729 By MS/MS By matching By MS/MS By MS/MS By matching By matching 2 2 2 1 2 49517000 8021100 8474100 27108000 3971300 1942900 0 7998 945 8109 35925;35926;35927;35928;35929;35930;35931;35932;35933 23699;23700;23701;23702;23703 23699 5 TSPGRVDLPGSSTTLTK LGDQSASRTSPGRVDL GSSTTLTKSFTSSSPS R T S T K S 0 1 0 1 0 0 0 2 0 0 2 1 0 0 2 3 4 0 0 1 0 17 1 1715.9054 H7BZX1;H7C1R7;H7BZK1;H7BXR3;E9PAS5;O94875-5;O94875-3;C9JKV9;O94875-2;G3XAI0;O94875-4;H7BXR4;E9PAW4;O94875-7;O94875 H7BZX1 223 239 SORBS2 Sorbin and SH3 domain-containing protein 2 yes no 3 0.0092594 44.045 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3505600 0 0 1217800 745210 0 1542700 7999 257 8110 35934;35935;35936 23704 23704 1 TSQLGDSPFYPGK LGNSSILKTSQLGDSP DSPFYPGKTTYGGAAA K T S G K T 0 0 0 1 0 1 0 2 0 0 1 1 0 1 2 2 1 0 1 0 0 13 0 1395.667 P49790;F6QR24;Q4LE47 P49790 251 263 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 2 4.921E-24 115.57 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 34471000 0 4706900 13565000 2297400 6147700 7753700 8000 531 8111 35937;35938;35939;35940;35941 23705;23706;23707;23708;23709 23709 4 TSQVGAASAPAKESPRK LQAKASGKTSQVGAAS PAKESPRKGAAPAPPG K T S R K G 4 1 0 0 0 1 1 1 0 0 0 2 0 0 2 3 1 0 0 1 0 17 2 1683.8904 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 368 384 TCOF1 Treacle protein no no 3 0.022122 50.827 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 4500200 841380 388850 852410 803810 952420 661350 8001 1082;383 8112 35942;35943;35944;35945;35946;35947 23710;23711 23711 1 TSSEASVSSSVAK ASSGLTSKTSSEASVS SVSSSVAKNSSSSGTS K T S A K N 2 0 0 0 0 0 1 0 0 0 0 1 0 0 0 6 1 0 0 2 0 13 0 1238.599 Q9NXV6 Q9NXV6 323 335 CDKN2AIP CDKN2A-interacting protein yes yes 2 5.7312E-16 112.02 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 16283000 1931300 2246600 6401900 1134500 2036300 2532700 8002 1560 8113 35948;35949;35950;35951;35952;35953 23712;23713;23714;23715;23716;23717;23718;23719 23715 7 TSSETNSTTSRVMEEK RDLEELPKTSSETNST TSRVMEEKDEYSSSET K T S E K D 0 1 1 0 0 0 3 0 0 0 0 1 1 0 0 4 4 0 0 1 0 16 1 1785.8051 Q8NFC6 Q8NFC6 2824 2839 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 3 0.0047388 50.806 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 3821400 0 1534400 1129000 1158000 0 0 8003 1325 8114 35954;35955;35956 23720;23721 23720 2 TSSGDASSLSIEETNKLR YEAAASSKTSSGDASS IEETNKLRAKLGLKPL K T S L R A 1 1 1 1 0 0 2 1 0 1 2 1 0 0 0 5 2 0 0 0 0 18 1 1893.928 O43290;E9PQI8 O43290 110 127 SART1 U4/U6.U5 tri-snRNP-associated protein 1 yes no 3 0.0057996 46.162 By matching By MS/MS By matching By matching By matching By matching 1 1800400 0 1800400 0 0 0 0 8004 713 8115 35957 23722 23722 1 TSSGLSNSFAGK SLYLETRKTSSGLSNS LSNSFAGKSNHHCHVS K T S G K S 1 0 1 0 0 0 0 2 0 0 1 1 0 1 0 4 1 0 0 0 0 12 0 1154.5568 Q9P0U3;Q9P0U3-2;F8VRZ8 Q9P0U3 125 136 SENP1 Sentrin-specific protease 1 yes no 2 6.4817E-12 108.56 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 13888000 1780900 1941400 0 1561200 3391300 5212800 8005 1573 8116 35958;35959;35960;35961;35962 23723;23724;23725;23726;23727 23727 5 TSSGTSIAGNPFQAK LLAEQHQRTSSGTSIA AGNPFQAKQGPSQNFP R T S A K Q 2 0 1 0 0 1 0 2 0 1 0 1 0 1 1 3 2 0 0 0 0 15 0 1464.7209 Q9NZC9;C9JP32;C9J8F8;C9J6I8 Q9NZC9 36 50 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 yes no 2 0.013429 45.54 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4697500 0 1019400 896160 0 787690 1994300 8006 1567 8117 35963;35964;35965;35966 23728;23729 23728 2 TSSGTSLSAMHSSGSSGK SKASSLHRTSSGTSLS HSSGSSGKGAGPLRGK R T S G K G 1 0 0 0 0 0 0 3 1 0 1 1 1 0 0 8 2 0 0 0 0 18 0 1667.7421 Q12888;Q12888-2;A6NNK5;F8VY86 Q12888 1315 1332 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 0.0015481 54.281 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 3234500 0 920530 819730 0 511510 982690 8007 1063 8118 35967;35968;35969;35970 23730 23730 1 TSSNNNSMVSNTLAK PTVKESCKTSSNNNSM MVSNTLAKMRIPNYQL K T S A K M 1 0 4 0 0 0 0 0 0 0 1 1 1 0 0 4 2 0 0 1 0 15 0 1566.7308 O60934;F5H3R2 O60934 409 423 NBN Nibrin yes no 2 6.0336E-05 88.768 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 25507000 3413100 2096100 2703100 2666100 6622300 8005800 8008 736 8119 35971;35972;35973;35974;35975;35976;35977 23731;23732;23733;23734;23735;23736;23737;23738 23733 8 TSTILAAAR YGPPGTGKTSTILAAA STILAAARELFGPELF K T S A R E 3 1 0 0 0 0 0 0 0 1 1 0 0 0 0 1 2 0 0 0 0 9 0 902.51853 P35249;C9JZI1;C9JGY5;F8WE44;C9JXZ7;C9JTT7;C9J8M3 P35249 85 93 RFC4 Replication factor C subunit 4 yes no 2 0.016863 72.325 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 7302800 0 1063000 859710 0 1360300 4019800 8009 894 8120 35978;35979;35980;35981 23739 23739 1 TSTKLHVGNISPTCTNK EASKNKSKTSTKLHVG ISPTCTNKELRAKFEE K T S N K E 0 0 2 0 1 0 0 1 1 1 1 2 0 0 1 2 4 0 0 1 0 17 1 1856.9414 Q9BWF3;E9PB51;E7EQS3;Q9BWF3-3;D6R9K7;Q9BWF3-2 Q9BWF3 76 92 RBM4 RNA-binding protein 4 yes no 3 0.0018531 79.347 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 2554100 636730 722280 937490 257590 0 0 8010 1457 8121 35982;35983;35984;35985 23740;23741 23741 2 TSTTGVATTQSPTPR PPSAGSVKTSTTGVAT TTQSPTPRSHSPSASQ K T S P R S 1 1 0 0 0 1 0 1 0 0 0 0 0 0 2 2 6 0 0 1 0 15 0 1503.7529 E9PMS6;Q8WWI1-3;E9PMT2;Q8WWI1;E9PLH4;Q8WWI1-4;F8WD26;Q8WWI1-2 E9PMS6 1168 1182 LMO7 LIM domain only protein 7 yes no 2 0.016737 44.045 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3371000 0 895740 745890 0 0 1729300 8011 460 8122 35986;35987;35988 23742 23742 1 TSVCALKPK QILEMPSKTSVCALKP SVCALKPKADAKLGMP K T S P K A 1 0 0 0 1 0 0 0 0 0 1 2 0 0 1 1 1 0 0 1 0 9 1 1002.5532 Q9BYB4;Q9BYB4-2 Q9BYB4 149 157 GNB1L Guanine nucleotide-binding protein subunit beta-like protein 1 yes no 2 0.0051106 106.68 By matching By matching By MS/MS By matching By matching By matching 1 1 1 2304200 418790 973680 911780 0 0 0 8012 1467 8123 35989;35990;35991 23743 23743 1 TSVQTEDDQLIAGQSAR EDFDVRSRTSVQTEDD LIAGQSARAIMAQLPQ R T S A R A 2 1 0 2 0 3 1 1 0 1 1 0 0 0 0 2 2 0 0 1 0 17 0 1817.8755 G3XAM7;B4E2G8;P35221;F6XBD8;P35221-2;Q8N1C0;F8W845;P26232-4;P26232-6;P26232-3;P26232-2;P26232-5;P26232 G3XAM7 654 670 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 yes no 2 0.0019754 60.618 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 4261700 733720 1370100 0 0 933350 1224500 8013 161 8124 35992;35993;35994;35995 23744;23745;23746 23744 3 TTAARPTFEPARGGR ________________ FEPARGGRGKGEGDLS M T T G R G 3 3 0 0 0 0 1 2 0 0 0 0 0 1 2 0 3 0 0 0 0 15 2 1586.8277 Q9P013 Q9P013 2 16 CWC15 Spliceosome-associated protein CWC15 homolog yes yes 3 0.013201 45.873 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 53531000 3935200 10327000 8155200 4896500 11601000 14616000 8014 1569 8125 35996;35997;35998;35999;36000;36001 23747 23747 1 TTASEPVEQSEATSK ASAPSTSRTTASEPVE EQSEATSKDCSRLTNG R T T S K D 2 0 0 0 0 1 3 0 0 0 0 1 0 0 1 3 3 0 0 1 0 15 0 1563.7264 Q15007 Q15007 254 268 WTAP Pre-mRNA-splicing regulator WTAP yes yes 2 0.00055545 71.031 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 3971800 0 852590 369060 345260 566800 1838100 8015 1125 8126 36002;36003;36004;36005;36006 23748;23749;23750 23748 3 TTASEPVEQSEATSKDCSR ASAPSTSRTTASEPVE ATSKDCSRLTNGPSNG R T T S R L 2 1 0 1 1 1 3 0 0 0 0 1 0 0 1 4 3 0 0 1 0 19 1 2081.9171 Q15007 Q15007 254 272 WTAP Pre-mRNA-splicing regulator WTAP yes yes 3 0.02293 36.451 By matching By matching By matching By matching By matching By MS/MS 1 1 1 898400 0 0 0 121510 290120 486770 8016 1125 8127 36007;36008;36009 23751 23751 1 TTCSRQFTSSSSMK ________________ FTSSSSMKGSCGIGGG M T T M K G 0 1 0 0 1 1 0 0 0 0 0 1 1 1 0 5 3 0 0 0 0 14 1 1606.7079 P02533;CON__P02533;P08779;CON__P08779 P02533 2 15 KRT14;KRT16 Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 0.0018195 69.261 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 80867000 0 0 17742000 55093000 0 8031800 + 8017 286;297 8128 36010;36011;36012 23752;23753;23754 23754 3 TTDDTTTDNYIAQGK EENGVFIKTTDDTTTD DNYIAQGKRKSNEMIT K T T G K R 1 0 1 3 0 1 0 1 0 1 0 1 0 0 0 0 5 0 1 0 0 15 0 1642.7322 Q7Z2T5 Q7Z2T5 595 609 TRMT1L TRMT1-like protein yes yes 2 1.6762E-124 148.85 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 68913000 3036300 0 13318000 5561000 16603000 30395000 8018 1248 8129 36013;36014;36015;36016;36017 23755;23756;23757;23758;23759 23759 5 TTDDTTTDNYIAQGKRK EENGVFIKTTDDTTTD YIAQGKRKSNEMITNL K T T R K S 1 1 1 3 0 1 0 1 0 1 0 2 0 0 0 0 5 0 1 0 0 17 2 1926.9283 Q7Z2T5 Q7Z2T5 595 611 TRMT1L TRMT1-like protein yes yes 3;4 0.0014233 60.937 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 2 2 14721000 2117200 2275700 3929600 2968600 1307000 2122900 8019 1248 8130 36018;36019;36020;36021;36022;36023;36024;36025;36026;36027;36028;36029 23760;23761;23762;23763;23764;23765;23766 23765 7 TTDMAPSKETEMALAK LEIMMGLKTTDMAPSK ETEMALAKDMALATKT K T T A K D 3 0 0 1 0 0 2 0 0 0 1 2 2 0 1 1 3 0 0 0 0 16 1 1722.8168 E7EVA0;P27816-6;P27816;P27816-2;P27816-5;B9ZVR1;H7C456 E7EVA0 264 279 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 3 0.016556 41.838 By matching By matching By matching By matching By MS/MS By matching 1 1239700 0 0 0 0 1239700 0 8020 388 8131 36030 23767 23767 1 TTECKQNESTIVEPK ELKQNESRTTECKQNE ESTIVEPKQNENRLSD R T T P K Q 0 0 1 0 1 1 3 0 0 1 0 2 0 0 1 1 3 0 0 1 0 15 1 1762.8407 Q6KC79-2;Q6KC79;Q6KC79-3 Q6KC79-2 658 672 NIPBL Nipped-B-like protein yes no 3 0.0066515 60.196 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 4804400 648000 862390 557340 0 997240 1739400 8021 1222 8132 36031;36032;36033;36034;36035 23768;23769 23768 1 TTEINRLPSANQGSPFK HFVLSALKTTEINRLP ANQGSPFKSALSTVSF K T T F K S 1 1 2 0 0 1 1 1 0 1 1 1 0 1 2 2 2 0 0 0 0 17 1 1858.9537 Q56NI9;E5RFE4;E5RFP7;E5RIE3 Q56NI9 62 78 ESCO2 N-acetyltransferase ESCO2 yes no 2;3 2.1894E-08 94.454 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 63394000 11289000 10100000 21583000 3546100 3049600 13826000 8022 1176 8133 36036;36037;36038;36039;36040;36041;36042 23770;23771;23772;23773;23774;23775;23776 23776 7 TTESHMDWEK SNDSSKFKTTESHMDW ESHMDWEKVAFKDFSG K T T E K V 0 0 0 1 0 0 2 0 1 0 0 1 1 0 0 1 2 1 0 0 0 10 0 1262.5238 E9PKP7;P17480-2;P17480;E9PMM2 E9PKP7 48 57 UBTF Nucleolar transcription factor 1 yes no 3 0.020391 59.908 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 4159900 480260 927040 0 0 1079000 1673600 8023 455 8134 36043;36044;36045;36046 23777;23778;23779 23778 3 TTEVTGTGLGRNRK GVKSKPRKTTEVTGTG TGLGRNRKKLSSYPKQ K T T R K K 0 2 1 0 0 0 1 3 0 0 1 1 0 0 0 0 4 0 0 1 0 14 2 1488.8009 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 2238 2251 AHCTF1 Protein ELYS yes no 3 0.034783 50.149 By MS/MS By matching By matching By matching By matching By matching 1 565620 565620 0 0 0 0 0 8024 1345 8135 36047 23780 23780 1 TTFQENTQSISVR GLDSSNLKTTFQENTQ NTQSISVRGIKFIPGP K T T V R G 0 1 1 0 0 2 1 0 0 1 0 0 0 1 0 2 3 0 0 1 0 13 0 1509.7423 A6NHR9;A6NHR9-2;A6NHR9-3 A6NHR9 1208 1220 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes no 2 0.0030946 64.104 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 4713000 702970 1841200 484000 0 544520 1140300 8025 23 8136 36048;36049;36050;36051;36052 23781;23782;23783 23783 3 TTGDKTVEAPLVTEEK SAPSALEKTTGDKTVE APLVTEEKTVEPATVS K T T E K T 1 0 0 1 0 0 3 1 0 0 1 2 0 0 1 0 4 0 0 2 0 16 1 1716.8782 Q96T58 Q96T58 1657 1672 SPEN Msx2-interacting protein yes yes 3 0.0046382 51.004 By matching By matching By MS/MS By matching By matching By matching 1 592150 0 0 592150 0 0 0 8026 1422 8137 36053 23784 23784 1 TTGEVVSGVVSK ENAHVAGKTTGEVVSG VVSGVVSKVFNQPKAK K T T S K V 0 0 0 0 0 0 1 2 0 0 0 1 0 0 0 2 2 0 0 4 0 12 0 1161.6241 Q14008-2;Q14008;Q14008-3;E9PQH5;E7ER31 Q14008-2 85 96 CKAP5 Cytoskeleton-associated protein 5 yes no 2 0.0019196 86.288 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 4587600 532960 1716300 766970 0 758760 812660 8027 1093 8138 36054;36055;36056;36057;36058 23785;23786 23786 2 TTGNATVDHLSK YCQTRYVKTTGNATVD ATVDHLSKYLALRIAL K T T S K Y 1 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 3 0 0 1 0 12 0 1242.6204 Q06587-2;Q06587 Q06587-2 257 268 RING1 E3 ubiquitin-protein ligase RING1 yes no 2;3 0.00022874 95.417 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 2 2 2 7259600 573340 1154800 2326600 0 1120300 2084600 8028 1043 8139 36059;36060;36061;36062;36063;36064;36065;36066 23787;23788;23789;23790;23791;23792;23793;23794 23790 8 TTIYEIQDDRGK HKKTVNQKTTIYEIQD EIQDDRGKMDVVGTGQ K T T G K M 0 1 0 2 0 1 1 1 0 2 0 1 0 0 0 0 2 0 1 0 0 12 1 1437.71 Q16666-3;Q16666-2;Q16666;H3BLV7;E7EPR3;H3BR88 Q16666-3 331 342 IFI16 Gamma-interferon-inducible protein 16 yes no 2;3 5.7384E-18 113.22 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 3 2 1 29153000 6747700 2872500 3794800 4396900 7943500 3398000 8029 1155 8140 36067;36068;36069;36070;36071;36072;36073;36074;36075;36076;36077;36078;36079;36080 23795;23796;23797;23798;23799;23800;23801;23802;23803;23804;23805;23806 23798 12 TTKIPCDSPQSDPVDTPTSTK EELVAAGKTTKIPCDS VDTPTSTKQRPKRSIR K T T T K Q 0 0 0 3 1 1 0 0 0 1 0 2 0 0 4 3 5 0 0 1 0 21 1 2274.0686 P46013;F5H4V4;P46013-2 P46013 1246 1266 MKI67 Antigen KI-67 no no 3 1.0252E-14 90.06 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 30809000 3781300 5244600 3954500 1758400 4665100 11405000 8030 919;920 8141 36081;36082;36083;36084;36085;36086 23807;23808;23809;23810;23811;23812;23813;23814;23815 23809 9 TTKIPCKSSPELEDTATSSK EESMTDDKTTKIPCKS EDTATSSKRRPRTRAQ K T T S K R 1 0 0 1 1 0 2 0 0 1 1 3 0 0 2 4 4 0 0 0 0 20 2 2179.0678 P46013;F5H4V4;P46013-2 P46013 2820 2839 MKI67 Antigen KI-67 no no 3;4 0.00059755 64.346 By MS/MS By matching By MS/MS By matching By matching By matching 2 1 1 5936200 4735000 0 1061200 139990 0 0 8031 919;920 8142 36087;36088;36089;36090 23816;23817;23818 23818 3 TTKMPCESSPPESADTPTSTR EEAVAAGKTTKMPCES ADTPTSTRRQPKTPLE K T T T R R 1 1 0 1 1 0 2 0 0 0 0 1 1 0 4 4 5 0 0 0 0 21 1 2279.0046 P46013;F5H4V4;P46013-2 P46013 1368 1388 MKI67 Antigen KI-67 no no 3 0.017505 37.373 By matching By matching By matching By matching By matching By MS/MS 1 1 1 6050500 0 0 1483900 0 2143500 2423100 8032 919;920 8143 36091;36092;36093 23819 23819 1 TTLFTQAAHGGQASLMK LKVISGQKTTLFTQAA GGQASLMKISDSTLKT K T T M K I 3 0 0 0 0 2 0 2 1 0 2 1 1 1 0 1 3 0 0 0 0 17 0 1760.888 Q9ULM3;H0Y6M6 Q9ULM3 907 923 YEATS2 YEATS domain-containing protein 2 yes no 3 0.009429 42.314 By matching By MS/MS By matching By matching By matching By matching 1 1 2201400 0 1634500 0 566910 0 0 8033 1609 8144 36094;36095 23820 23820 1 TTLILPTQQVR HSMQSPQKTTLILPTQ ILPTQQVRRSSRIKPP K T T V R R 0 1 0 0 0 2 0 0 0 1 2 0 0 0 1 0 3 0 0 1 0 11 0 1268.7452 B4DZR9;Q9UQR0;B4DRC2 B4DZR9 239 249 SCML2 Sex comb on midleg-like protein 2 yes no 2 1.1991E-41 131.82 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 119220000 56745000 10058000 13504000 30575000 8342800 0 8034 149 8145 36096;36097;36098;36099;36100 23821;23822;23823;23824;23825 23821 5 TTLILPTQQVRR HSMQSPQKTTLILPTQ LPTQQVRRSSRIKPPG K T T R R S 0 2 0 0 0 2 0 0 0 1 2 0 0 0 1 0 3 0 0 1 0 12 1 1424.8463 B4DZR9;Q9UQR0;B4DRC2 B4DZR9 239 250 SCML2 Sex comb on midleg-like protein 2 yes no 2;3 0.00010278 96.171 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 3 75053000 13913000 6809800 12710000 6951300 2087700 32581000 8035 149 8146 36101;36102;36103;36104;36105;36106;36107;36108;36109;36110;36111;36112 23826;23827;23828;23829;23830;23831;23832 23829 6 TTPNKTPPGADPKQLER ________________ ADPKQLERTGTVREIG M T T E R T 1 1 1 1 0 1 1 1 0 0 1 2 0 0 4 0 3 0 0 0 0 17 2 1848.9694 D6RB36;D6R9Q5;D6RD74;D6RA92;Q9UM13 D6RB36 2 18 ANAPC10 Anaphase-promoting complex subunit 10 yes no 3 0.0015559 69.379 By matching By MS/MS By matching By matching By matching By matching 1 1 1 6635600 279800 3484300 0 0 2871600 0 8036 319 8147 36113;36114;36115 23833;23834 23834 2 TTPSQFSTLK KFLRSIIKTTPSQFST PSQFSTLKMNSDTVDY K T T L K M 0 0 0 0 0 1 0 0 0 0 1 1 0 1 1 2 3 0 0 0 0 10 0 1108.5764 Q6KC79-2;Q6KC79 Q6KC79-2 1733 1742 NIPBL Nipped-B-like protein yes no 2 0.013087 69.65 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 8066200 0 1112700 679470 483620 1525500 4264800 8037 1222 8148 36116;36117;36118;36119;36120 23835 23835 1 TTPSYVAFTDTER IANDQGNRTTPSYVAF VAFTDTERLIGDAAKN R T T E R L 1 1 0 1 0 0 1 0 0 0 0 0 0 1 1 1 4 0 1 1 0 13 0 1486.694 P11142;E9PKE3;P11142-2;E9PNE6;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;P54652;E9PI65;F8W1P1;B4DXY3;F8WEE3;Q53FA3;P34931;H0YIE7;B3KUS2;E7EP11;P17066;P48741;P08107;H0YG33;F8VZJ4;F5H1D3;F5GZ62 P11142 37 49 HSPA8;HSPA2;HSPA1L;HSPA6;HSPA7;HSPA1A Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1-like;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7;Heat shock 70 kDa protein 1A/1B no no 2 0.036805 42.317 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 7424400 0 1375500 3068500 0 1207800 1772600 8038 824;619;846 8149 36121;36122;36123;36124 23836;23837 23836 2 TTQFSCTLGEK IKTESTLKTTQFSCTL FSCTLGEKFEETTADG K T T E K F 0 0 0 0 1 1 1 1 0 0 1 1 0 1 0 1 3 0 0 0 0 11 0 1270.5864 Q01469 Q01469 62 72 FABP5 Fatty acid-binding protein, epidermal yes yes 2 5.6913E-42 134.49 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 7997600 970870 861080 1975200 2269700 637060 1283800 8039 1027 8150 36125;36126;36127;36128;36129;36130 23838;23839;23840;23841 23839 4 TTQIINITMTK KTRSARRRTTQIINIT IINITMTKKLDVEEPD R T T T K K 0 0 1 0 0 1 0 0 0 3 0 1 1 0 0 0 4 0 0 0 0 11 0 1262.6904 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9 Q14980-2 1797 1807 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 0.0011139 114.72 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 13592000 0 5725500 0 7866700 0 0 8040 1121 8151 36131;36132 23842;23843 23843 1 TTQIPQYLYEGGISR IGETGSGKTTQIPQYL LYEGGISRQGIIAVTQ K T T S R Q 0 1 0 0 0 2 1 2 0 2 1 0 0 0 1 1 2 0 2 0 0 15 0 1724.8733 Q9H6R0 Q9H6R0 104 118 DHX33 Putative ATP-dependent RNA helicase DHX33 yes yes 2 0.025369 54.859 By matching By matching By matching By MS/MS By matching By matching 1 6801700 0 0 0 6801700 0 0 8041 1496 8152 36133 23844 23844 0 TTQNIATGTKNTLGSGVTGAANVAK GAVQTGLKTTQNIATG TGAANVAKGAIQGGLD K T T A K G 4 0 3 0 0 1 0 4 0 1 1 2 0 0 0 1 6 0 0 2 0 25 1 2374.2452 Q96Q06-2 Q96Q06-2 773 797 PLIN4 Perilipin-4 yes yes 3 0.0036229 46.22 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 12664000 3082400 1628700 2846200 0 2856900 2250100 8042 1413 8153 36134;36135;36136;36137;36138 23845;23846;23847 23845 3 TTSESSSSPSASLKGPTSQESQLNAMK PSGSTTSKTTSESSSS ESQLNAMKRLQMVKKK K T T M K R 2 0 1 0 0 2 2 1 0 0 2 2 1 0 2 9 3 0 0 0 0 27 1 2739.2869 Q96CB8 Q96CB8 420 446 INTS12 Integrator complex subunit 12 yes yes 3 0.00058531 49.662 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 6667000 2033200 1053600 1630300 0 0 1949900 8043 1375 8154 36139;36140;36141;36142 23848;23849;23850;23851 23851 4 TTSILCLAR AGPPGTGKTTSILCLA TSILCLARALLGPALK K T T A R A 1 1 0 0 1 0 0 0 0 1 2 0 0 0 0 1 2 0 0 0 0 9 0 1033.559 P35250-2;P35250 P35250-2 83 91 RFC2 Replication factor C subunit 2 yes no 2 0.012149 81.972 By matching By matching By matching By MS/MS By matching By matching 1 1 29177000 0 23334000 0 5843700 0 0 8044 895 8155 36143;36144 23852 23852 1 TTSIRQFTSSSSIK ________________ FTSSSSIKGSSGLGGG M T T I K G 0 1 0 0 0 1 0 0 0 2 0 1 0 1 0 5 3 0 0 0 0 14 1 1541.8049 Q04695;CON__Q04695;H9KV34;A8MW45;F5H7G6;C9JH30 Q04695 2 15 KRT17 Keratin, type I cytoskeletal 17 yes no 2 7.5885E-30 116.78 By matching By matching By matching By MS/MS By matching By matching 1 13569000 0 0 0 13569000 0 0 + 8045 304 8156 36145 23853 23853 1 TTSIRQFTSSSSIKGSSGLGGGSSR ________________ GLGGGSSRTSCRLSGG M T T S R T 0 2 0 0 0 1 0 5 0 2 1 1 0 1 0 9 3 0 0 0 0 25 2 2444.2255 Q04695;CON__Q04695;H9KV34;A8MW45;F5H7G6;C9JH30 Q04695 2 26 KRT17 Keratin, type I cytoskeletal 17 yes no 3 2.4523E-284 164.27 By matching By matching By matching By MS/MS By matching By matching 1 1 135960000 0 28978000 0 106980000 0 0 + 8046 304 8157 36146;36147 23854 23854 1 TTSPLEEEER QQQEKEMKTTSPLEEE SPLEEEEREIKSSQGL K T T E R E 0 1 0 0 0 0 4 0 0 0 1 0 0 0 1 1 2 0 0 0 0 10 0 1189.5463 E7EQT4;Q9UKV3;Q9UKV3-5 E7EQT4 323 332 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.0097058 75.229 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 15739000 2494600 3039500 0 1372400 3525900 5306300 8047 364 8158 36148;36149;36150;36151;36152 23855;23856;23857 23856 3 TTSSANNPNLMYQDECDRR GGGRSRYRTTSSANNP YQDECDRRLRGVKDGG R T T R R L 1 2 3 2 1 1 1 0 0 0 1 0 1 0 1 2 2 0 1 0 0 19 1 2270.9644 Q92841-1;Q92841;Q92841-2;C9JMU5;G5E9L5;Q9UQL5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 490 508 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 3 0.0069295 39.91 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 6462500 931640 878900 0 0 1722800 2929200 8048 1361;629 8159 36153;36154;36155;36156 23858;23859;23860 23858 3 TTTAAAVASTGPSSR KSTQTVAKTTTAAAVA ASTGPSSRSPSTLLPK K T T S R S 4 1 0 0 0 0 0 1 0 0 0 0 0 0 1 3 4 0 0 1 0 15 0 1376.6896 E7EVA0;P27816-6;P27816;P27816-2;P27816-4;E9PGM5;P27816-5;B9ZVR1;H0Y2V1;F8W9U4;H7C4C5;B5MEG9 E7EVA0 1955 1969 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.017816 43.557 By MS/MS By matching By matching By matching By matching By matching 1 858400 858400 0 0 0 0 0 8049 388 8160 36157 23861 23861 1 TTTALISLSCEK RLKNSAIKTTTALISL LISLSCEKRIILTGTP K T T E K R 1 0 0 0 1 0 1 0 0 1 2 1 0 0 0 2 3 0 0 0 0 12 0 1322.6752 Q9Y620 Q9Y620 443 454 RAD54B DNA repair and recombination protein RAD54B yes yes 2 0.010456 58.595 By matching By matching By matching By matching By matching By MS/MS 1 1 5517200 0 445760 0 0 0 5071500 8050 1660 8161 36158;36159 23862 23862 1 TTTGPPHLVPPQPLPR PQQSHFTKTTTGPPHL VPPQPLPRRGTQPVGS K T T P R R 0 1 0 0 0 1 0 1 1 0 2 0 0 0 6 0 3 0 0 1 0 16 0 1706.9468 Q9UNY4;Q9UNY4-2 Q9UNY4 482 497 TTF2 Transcription termination factor 2 yes no 3 0.00085132 80.371 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 11849000 0 8115100 0 0 0 3733600 8051 1618 8162 36160;36161 23863;23864 23864 2 TTTLSGTAPAAGVVPSR TSTSSMKKTTTLSGTA AAGVVPSRVKATPMPS K T T S R V 3 1 0 0 0 0 0 2 0 0 1 0 0 0 2 2 4 0 0 2 0 17 0 1584.8471 E7EVA0;P27816-6;P27816;P27816-2;P27816-4;E9PGM5;P27816-5;B9ZVR1;H0Y2V1;B4DSQ1;F8W9U4;H7C4C5;B5MEG9 E7EVA0 2017 2033 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 0.0094057 43.794 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 4781300 2125800 0 0 748400 357950 1549100 8052 388 8163 36162;36163;36164;36165 23865;23866 23866 2 TTTLSGTAPAAGVVPSRVK TSTSSMKKTTTLSGTA GVVPSRVKATPMPSRP K T T V K A 3 1 0 0 0 0 0 2 0 0 1 1 0 0 2 2 4 0 0 3 0 19 1 1812.0105 E7EVA0;P27816-6;P27816;P27816-2;P27816-4;E9PGM5;P27816-5;B9ZVR1;H0Y2V1;B4DSQ1;F8W9U4;H7C4C5;B5MEG9 E7EVA0 2017 2035 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 4.0988E-51 114.56 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 3 2 2 70893000 16177000 5392200 7456800 8846900 19953000 13067000 8053 388 8164 36166;36167;36168;36169;36170;36171;36172;36173;36174;36175;36176;36177;36178 23867;23868;23869;23870;23871;23872;23873;23874;23875;23876;23877 23871 9 TTTPGPSLSQGVSVDEK GHPSTGLKTTTPGPSL QGVSVDEKLMPSAPVN K T T E K L 0 0 0 1 0 1 1 2 0 0 1 1 0 0 2 3 3 0 0 2 0 17 0 1701.8421 O60934;F5H3R2 O60934 335 351 NBN Nibrin yes no 2 0.00056793 72.207 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 12939000 0 3381600 635980 0 1910300 7011500 8054 736 8165 36179;36180;36181;36182 23878;23879 23878 2 TTTPNMNPAINYQPQSSSSVPCQR PPKPGLVRTTTPNMNP SSSVPCQRTTSSAIYM R T T Q R T 1 1 3 0 1 3 0 0 0 1 0 0 1 0 4 4 3 0 1 1 0 24 0 2677.2224 Q8WXI9 Q8WXI9 287 310 GATAD2B Transcriptional repressor p66-beta yes yes 3 2.0152E-07 62.532 By matching By matching By matching By matching By matching By MS/MS 1 15010000 0 0 0 0 0 15010000 8055 1344 8166 36183 23880;23881 23880 2 TTTTNTQVEGDDEAAFLER SVPDEEAKTTTTNTQV DEAAFLERLARREERR K T T E R L 2 1 1 2 0 1 3 1 0 0 1 0 0 1 0 0 5 0 0 1 0 19 0 2096.9498 Q05682-5;E9PGZ1;Q05682-4;F5H1Z9;E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;C9J813;C9JEK3 Q05682-5 75 93 CALD1 Caldesmon yes no 2 6.6644E-18 100.39 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 15363000 6533700 6490800 0 2338200 0 0 8056 396 8167 36184;36185;36186 23882;23883;23884 23883 3 TTVKELIS TERKDFIKTTVKELIS TTVKELIS________ K T T I S - 0 0 0 0 0 0 1 0 0 1 1 1 0 0 0 1 2 0 0 1 0 8 1 889.51205 P35659;P35659-2;B4DFG0 P35659 368 375 DEK Protein DEK yes no 2 0.037817 88.177 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 119030000 25789000 0 17895000 20355000 480550 54507000 8057 901 8168 36187;36188;36189;36190;36191 23885 23885 1 TTVQQEPLESGAK PSAPPGNKTTVQQEPL EPLESGAKNKSTEQQQ K T T A K N 1 0 0 0 0 2 2 1 0 0 1 1 0 0 1 1 2 0 0 1 0 13 0 1386.6991 P49750-3;P49750;P49750-4;F8VU51 P49750-3 258 270 YLPM1 YLP motif-containing protein 1 yes no 2 1.7168E-09 104.59 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 2 1 2396700 206050 0 282120 0 1256900 651640 8058 941 8169 36192;36193;36194;36195;36196 23886;23887;23888 23886 2 TTVQQEPLESGAKNK PSAPPGNKTTVQQEPL LESGAKNKSTEQQQAA K T T N K S 1 0 1 0 0 2 2 1 0 0 1 2 0 0 1 1 2 0 0 1 0 15 1 1628.837 P49750-3;P49750;P49750-4;F8VU51 P49750-3 258 272 YLPM1 YLP motif-containing protein 1 yes no 3 0.0024911 66.215 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 5408100 1956300 0 727320 783810 1940700 0 8059 941 8170 36197;36198;36199;36200 23889;23890;23891;23892 23892 4 TTYGGAAAAVRQSK DSPFYPGKTTYGGAAA AAAVRQSKLRNTPYQA K T T S K L 4 1 0 0 0 1 0 2 0 0 0 1 0 0 0 1 2 0 1 1 0 14 1 1379.7157 P49790;F6QR24;Q4LE47 P49790 264 277 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 2;3 4.0682E-124 152 By matching By MS/MS By matching By matching By matching By MS/MS 2 2 2 2 2 2 39251000 2342300 5452900 5972200 6775400 9787300 8920900 8060 531 8171 36201;36202;36203;36204;36205;36206;36207;36208;36209;36210;36211;36212 23893;23894;23895;23896 23894 4 TTYSGSLGFGSSSCR SLLCSPCKTTYSGSLG GFGSSSCRSLGYGSRS K T T C R S 0 1 0 0 1 0 0 3 0 0 1 0 0 1 0 5 2 0 1 0 0 15 0 1565.678 Q52LG2 Q52LG2 94 108 KRTAP13-2 Keratin-associated protein 13-2 yes yes 2 0.0078274 49.265 By matching By matching By matching By MS/MS By matching By matching 1 776930 0 0 0 776930 0 0 8061 1173 8172 36213 23897 23897 1 TVACGGTRDQLFMQEK APMSSAWKTVACGGTR DQLFMQEKARQLLGRL K T V E K A 1 1 0 1 1 2 1 2 0 0 1 1 1 1 0 0 2 0 0 1 0 16 1 1839.8608 F8W6N6;P10244 F8W6N6 641 656 MYBL2 Myb-related protein B yes no 3 0.0362 37.657 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6040300 1027200 0 0 629690 2783400 1600000 8062 554 8173 36214;36215;36216;36217 23898 23898 1 TVAEVDSESLPSSSK LIKGIQAKTVAEVDSE ESLPSSSKMHGMSFDV K T V S K M 1 0 0 1 0 0 2 0 0 0 1 1 0 0 1 5 1 0 0 2 0 15 0 1534.7362 F8WDY3;P28715;I3L0G8 F8WDY3 131 145 ERCC5 DNA repair protein complementing XP-G cells yes no 2 0.00050637 83.633 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 6588600 0 1930200 1857200 0 603780 2197400 8063 571 8174 36218;36219;36220;36221 23899;23900;23901 23901 2 TVAGGAWTYNTTSAVTVK WHCGSCMKTVAGGAWT TTSAVTVKSAIRRLKE K T V V K S 3 0 1 0 0 0 0 2 0 0 0 1 0 0 0 1 5 1 1 3 0 18 0 1825.921 C9J4Z3;P61513 C9J4Z3 39 56 RPL37A 60S ribosomal protein L37a yes no 2 0.026859 74.744 By matching By matching By matching By matching By MS/MS By matching 1 0 0 0 0 0 0 0 8064 229 8175 36222 23902 23902 1 TVANLLSGKSPRK MPHPATGKTVANLLSG LSGKSPRKSAEPSANT K T V R K S 1 1 1 0 0 0 0 1 0 0 2 2 0 0 1 2 1 0 0 1 0 13 2 1369.8041 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 147 159 TCOF1 Treacle protein no no 2;3 6.1615E-05 98 By MS/MS By matching By matching By matching By MS/MS By matching 2 1 31874000 31388000 0 0 0 486270 0 8065 1082;383 8176 36223;36224;36225 23903;23904;23905 23905 3 TVAQSQQLETNSQR VVIQEMLKTVAQSQQL QLETNSQRDFKVVLLT K T V Q R D 1 1 1 0 0 4 1 0 0 0 1 0 0 0 0 2 2 0 0 1 0 14 0 1588.7805 C9JU95;P40938 C9JU95 114 127 RFC3 Replication factor C subunit 3 yes no 2 0.0012833 70.26 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 4023700 0 624560 524990 119580 785970 1968600 8066 270 8177 36226;36227;36228;36229;36230 23906 23906 1 TVAQSQQLETNSQRDFK VVIQEMLKTVAQSQQL TNSQRDFKVVLLTEVD K T V F K V 1 1 1 1 0 4 1 0 0 0 1 1 0 1 0 2 2 0 0 1 0 17 1 1978.9708 C9JU95;P40938 C9JU95 114 130 RFC3 Replication factor C subunit 3 yes no 3 0.0023723 76.574 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 15751000 934860 2713000 3017400 430600 3151000 5503500 8067 270 8178 36231;36232;36233;36234;36235;36236 23907;23908;23909 23909 3 TVASRYDEYVNVK QHAAELIKTVASRYDE YDEYVNVKDFSDKINR K T V V K D 1 1 1 1 0 0 1 0 0 0 0 1 0 0 0 1 1 0 2 3 0 13 1 1542.7678 Q8WUM4;E9PFU1 Q8WUM4 286 298 PDCD6IP Programmed cell death 6-interacting protein yes no 3 0.034005 43.501 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3361400 513200 1306800 0 0 0 1541500 8068 429 8179 36237;36238;36239 23910 23910 1 TVASSLGQIPMQRQPIQK KHKNQSPKTVASSLGQ MQRQPIQKDSTTLED_ K T V Q K D 1 1 0 0 0 4 0 1 0 2 1 1 1 0 2 2 1 0 0 1 0 18 1 1981.0779 B7Z367;Q9UL40;D6RJ07;Q9UL40-2;B7Z4J8;B7Z4N4 B7Z367 238 255 ZNF346 Zinc finger protein 346 yes no 3 4.1753E-32 107.35 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 66353000 0 15825000 29402000 16524000 4602700 0 8069 184 8180 36240;36241;36242;36243 23911;23912;23913;23914;23915 23914 5 TVASTAMNSQSSR LEQGNNSRTVASTAMN AMNSQSSRSHAIFTIS R T V S R S 2 1 1 0 0 1 0 0 0 0 0 0 1 0 0 4 2 0 0 1 0 13 0 1338.6198 O95239;O95239-2;Q2VIQ3 O95239 199 211 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B yes no 2 1.0701E-90 143.56 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 15486000 512700 1190500 809440 619370 1304500 11050000 8070 768 8181 36244;36245;36246;36247;36248;36249 23916;23917;23918;23919;23920 23917 5 TVATASQEIIIASTK QVHRITGKTVATASQE EIIIASTKVLEIPLLP K T V T K V 3 0 0 0 0 1 1 0 0 3 0 1 0 0 0 2 3 0 0 1 0 15 0 1531.8457 Q12968-5;Q12968-6;Q12968-4;I3L3K7;H3BR83;H3BRS1;Q12968-3;Q12968-2;Q12968 Q12968-5 505 519 NFATC3 Nuclear factor of activated T-cells, cytoplasmic 3 yes no 2 2.0434E-31 127.18 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 23863000 10612000 6594600 0 6656500 0 0 8071 643 8182 36250;36251;36252 23921;23922;23923;23924 23923 3 TVAVWDSETGERVK LFSASTDKTVAVWDSE SETGERVKRLKGHTSF K T V V K R 1 1 0 1 0 0 2 1 0 0 0 1 0 0 0 1 2 1 0 3 0 14 1 1575.7893 Q96DI7;B4DQJ1 Q96DI7 132 145 SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein yes no 3 0.0016899 67.997 By matching By matching By matching By matching By matching By MS/MS 1 1 2761900 0 0 0 0 996170 1765700 8072 117 8183 36253;36254 23925;23926 23926 2 TVCRNQGCCGVRGQFCGPCLR RQKTIDTKTVCRNQGC QFCGPCLRNRYGEDVR K T V L R N 0 3 1 0 5 2 0 4 0 0 1 0 0 1 1 0 1 0 0 2 0 21 2 2541.1028 C9K0Y1;Q96GN5-4;Q96GN5-2;Q96GN5 C9K0Y1 319 339 CDCA7L Cell division cycle-associated 7-like protein yes no 4 0.025457 34.202 By matching By MS/MS By matching By matching By matching By matching 1 1 1 5040900 0 1347300 1425500 0 0 2268100 8073 280 8184 36255;36256;36257 23927 23927 1 TVDMESTEVFTK TSEENSKKTVDMESTE ESTEVFTKKTKLTEEE K T V T K K 0 0 0 1 0 0 2 0 0 0 0 1 1 1 0 1 3 0 0 2 0 12 0 1385.6384 CON__P02663 CON__P02663 138 149 yes yes 2 0.032584 57.52 By MS/MS By matching By matching By matching By matching By matching 1 1561900 1561900 0 0 0 0 0 + 8074 289 8185 36258 23928 23928 0 TVEAPLVTEEK LEKTTGDKTVEAPLVT APLVTEEKTVEPATVS K T V E K T 1 0 0 0 0 0 3 0 0 0 1 1 0 0 1 0 2 0 0 2 0 11 0 1214.6394 Q96T58 Q96T58 1662 1672 SPEN Msx2-interacting protein yes yes 2 0.0082479 67.385 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4585000 636210 1348400 912000 0 0 1688400 8075 1422 8186 36259;36260;36261;36262 23929 23929 1 TVEEALTIKNTDIAK ATEWVKGKTVEEALTI IKNTDIAKELCLPPVK K T V A K E 2 0 1 1 0 0 2 0 0 2 1 2 0 0 0 0 3 0 0 1 0 15 1 1644.8934 F5H5N2;B4DNC9;B3KQ30;Q9H1K1;B1P7G3;Q9H1K1-2 F5H5N2 113 127 ISCU Iron-sulfur cluster assembly enzyme ISCU, mitochondrial yes no 3 5.0854E-31 118.08 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 3278000 0 1724700 0 0 0 1553300 8076 70 8187 36263;36264 23930;23931 23931 2 TVEGEFTGVGK DEEGQDAKTVEGEFTG GEFTGVGKKGQACVQL K T V G K K 0 0 0 0 0 0 2 3 0 0 0 1 0 1 0 0 2 0 0 2 0 11 0 1122.5557 Q5T280 Q5T280 124 134 C9orf114 Uncharacterized protein C9orf114 yes yes 2 2.9028E-05 103.21 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 45178000 3688500 9786000 7286200 0 8766000 15651000 8077 1189 8188 36265;36266;36267;36268;36269 23932;23933 23933 2 TVEICPFSFDSRDKER KPQIPEARTVEICPFS FDSRDKERQLQKEKKI R T V E R Q 0 2 0 2 1 0 2 0 0 1 0 1 0 2 1 2 1 0 0 1 0 16 2 1984.9313 Q9ULW0;Q96RR5 Q9ULW0 532 547 TPX2;HCA90 Targeting protein for Xklp2 yes no 3;4 0.00058073 84.297 By matching By MS/MS By matching By MS/MS By matching By matching 2 2 137050000 0 99860000 0 37186000 0 0 8078 1611 8189 36270;36271;36272;36273 23934;23935;23936;23937 23937 4 TVEPGALAVLSQLK WLAHNEVRTVEPGALA LAVLSQLKNLDLSHNF R T V L K N 2 0 0 0 0 1 1 1 0 0 3 1 0 0 1 1 1 0 0 2 0 14 0 1424.8239 H3BM69;H3BNZ6;Q24JQ5;Q6UXK2 H3BM69 89 102 ISLR2 Immunoglobulin superfamily containing leucine-rich repeat protein 2 yes no 3 0.0066917 52.576 By matching By matching By matching By matching By matching By MS/MS 1 1 6039700 0 0 0 1908500 0 4131200 8079 630 8190 36274;36275 23938 23938 1 TVETRDGQVINETSQHHDDLE SKRTLLIKTVETRDGQ SQHHDDLE________ K T V L E - 0 1 1 3 0 2 3 1 2 1 1 0 0 0 0 1 3 0 0 2 0 21 1 2422.0997 P08670 P08670 446 466 VIM Vimentin yes yes 3;4 8.8754E-06 70.987 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 46012000 10440000 7822900 10613000 5767500 4728000 6640900 8080 808 8191 36276;36277;36278;36279;36280;36281;36282;36283;36284;36285;36286;36287 23939;23940;23941;23942;23943;23944;23945;23946 23946 8 TVEVGRAYFETEK QEERDKGKTVEVGRAY RAYFETEKKHFTILDA K T V E K K 1 1 0 0 0 0 3 1 0 0 0 1 0 1 0 0 2 0 1 2 0 13 1 1527.7569 H3BR35;P15170;P15170-2;H3BSV8 H3BR35 145 157 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes no 2;3 0.0029048 77.204 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2 2 10633000 279080 0 914260 971040 2083700 6385200 8081 642 8192 36288;36289;36290;36291;36292;36293;36294 23947;23948 23948 2 TVEVGRAYFETEKK QEERDKGKTVEVGRAY AYFETEKKHFTILDAP K T V K K H 1 1 0 0 0 0 3 1 0 0 0 2 0 1 0 0 2 0 1 2 0 14 2 1655.8519 H3BR35;P15170;P15170-2;H3BSV8 H3BR35 145 158 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes no 4 0.00099023 76.24 By MS/MS By matching By matching By matching By matching By matching 1 1451000 1451000 0 0 0 0 0 8082 642 8193 36295 23949 23949 1 TVEVLEPEVTK NRVEIYEKTVEVLEPE VLEPEVTKLMNFMYFQ K T V T K L 0 0 0 0 0 0 3 0 0 0 1 1 0 0 1 0 2 0 0 3 0 11 0 1242.6707 Q7L576;E7EQ04;E7EVJ5;Q96F07-2;E7EVF4;F5H583;Q96F07;E7EWA4;H0YLJ5;H0YL39 Q7L576 111 121 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 yes no 2 0.0036199 81.525 By matching By matching By matching By matching By matching By MS/MS 1 1 6281800 0 629000 0 0 0 5652800 8083 359 8194 36296;36297 23950 23950 1 TVFAEHISDECK PRGLRTFKTVFAEHIS EHISDECKRRFYKNWH K T V C K R 1 0 0 1 1 0 2 0 1 1 0 1 0 1 0 1 1 0 0 1 0 12 0 1434.6449 P39023;G5E9G0;B5MCW2;H7C422;H7C3M2;F8WCR1 P39023 104 115 RPL3 60S ribosomal protein L3 yes no 2;3 1.5946E-07 104.94 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 3 2 1 2 2 2 33053000 3006900 2484800 1268200 3288900 13091000 9913000 8084 905 8195 36298;36299;36300;36301;36302;36303;36304;36305;36306;36307;36308;36309 23951;23952;23953;23954;23955;23956;23957 23955 7 TVFAEHISDECKR PRGLRTFKTVFAEHIS HISDECKRRFYKNWHK K T V K R R 1 1 0 1 1 0 2 0 1 1 0 1 0 1 0 1 1 0 0 1 0 13 1 1590.746 P39023;G5E9G0;B5MCW2;H7C422;H7C3M2;F8WCR1 P39023 104 116 RPL3 60S ribosomal protein L3 yes no 3 0.0059366 54.023 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 5451000 561790 766590 0 850600 1660900 1611100 8085 905 8196 36310;36311;36312;36313;36314 23958 23958 1 TVFAEHISDECKRR PRGLRTFKTVFAEHIS ISDECKRRFYKNWHKS K T V R R F 1 2 0 1 1 0 2 0 1 1 0 1 0 1 0 1 1 0 0 1 0 14 2 1746.8472 P39023;G5E9G0;B5MCW2;H7C422;H7C3M2;F8WCR1 P39023 104 117 RPL3 60S ribosomal protein L3 yes no 4 0.02661 41.383 By matching By matching By matching By matching By MS/MS By matching 1 1 2114000 0 0 0 634730 1479300 0 8086 905 8197 36315;36316 23959 23959 1 TVGFGTNNSEHITYLEHNPYEK PSGNKKGKTVGFGTNN LEHNPYEKFSKEELKK K T V E K F 0 0 3 0 0 0 3 2 2 1 1 1 0 1 1 1 3 0 2 1 0 22 0 2549.1823 Q99459 Q99459 602 623 CDC5L Cell division cycle 5-like protein yes yes 3;4 8.6184E-06 60.621 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 2 1 32128000 7406100 10911000 0 0 0 13812000 8087 1423 8198 36317;36318;36319;36320 23960;23961;23962;23963 23962 4 TVGVQGDCRSYSYVCGISSK NAFLLPIKTVGVQGDC YVCGISSKDEPDWESL K T V S K D 0 1 0 1 2 1 0 3 0 1 0 1 0 0 0 4 1 0 2 3 0 20 1 2222.0096 F8W720;B4DUT7;P49915 F8W720 417 436 GMPS GMP synthase [glutamine-hydrolyzing] yes no 3 0.0029715 48.288 By matching By matching By matching By matching By matching By MS/MS 1 3086300 0 0 0 0 0 3086300 8088 129 8199 36321 23964 23964 1 TVIIDHGSGFLK ________________ DHGSGFLKAGTAGWNE R T V L K A 0 0 0 1 0 0 0 2 1 2 1 1 0 1 0 1 1 0 0 1 0 12 0 1285.703 Q9H568 Q9H568 5 16 ACTL8 Actin-like protein 8 yes yes 2 9.9483E-64 138.42 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 4115300 0 0 0 1276000 0 2839300 8089 1491 8200 36322;36323 23965;23966 23966 1 TVIIEQSWGSPK VTMGPKGRTVIIEQSW EQSWGSPKVTKDGVTV R T V P K V 0 0 0 0 0 1 1 1 0 2 0 1 0 0 1 2 1 1 0 1 0 12 0 1343.7085 P10809;B7Z712;C9JL25;E7EXB4;E7ESH4;C9JL19;C9JCQ4 P10809 61 72 HSPD1 60 kDa heat shock protein, mitochondrial yes no 2 0.0017943 79.492 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 5013400 2696000 2317400 0 0 0 0 8090 820 8201 36324;36325 23967;23968;23969 23968 3 TVIKPESCVPCGK RLHDFVSKTVIKPESC ESCVPCGKRIKFGKLS K T V G K R 0 0 0 0 2 0 1 1 0 1 0 2 0 0 2 1 1 0 0 2 0 13 1 1473.732 Q9H0H5;F8VRL2 Q9H0H5 293 305 RACGAP1 Rac GTPase-activating protein 1 yes no 3 2.094E-09 104.94 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 66529000 7150200 13871000 8857600 5312700 15597000 15741000 8091 1479 8202 36326;36327;36328;36329;36330;36331 23970;23971;23972;23973;23974;23975 23972 6 TVITEEFKVPDK LGALVHQRTVITEEFK EEFKVPDKMVGFIIGR R T V D K M 0 0 0 1 0 0 2 0 0 1 0 2 0 1 1 0 2 0 0 2 0 12 1 1404.75 Q96I24;A6NJ37;Q96I24-2 Q96I24 76 87 FUBP3 Far upstream element-binding protein 3 yes no 2;3 1.5633E-50 134.75 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 2 1 1 87821000 4875100 58963000 0 993530 0 22989000 8092 1394 8203 36332;36333;36334;36335;36336 23976;23977;23978;23979 23976 4 TVKENWKNLSDSEK DSPQEKLKTVKENWKN KNLSDSEKELYIQHAK K T V E K E 0 0 2 1 0 0 2 0 0 0 1 3 0 0 0 2 1 1 0 1 0 14 2 1676.837 Q00059;A8MRB2;H7BYN3 Q00059 184 197 TFAM Transcription factor A, mitochondrial yes no 3 0.027624 51.939 By MS/MS By matching By matching By matching By matching By matching 1 1937300 1937300 0 0 0 0 0 8093 1019 8204 36337 23980 23980 1 TVKLKSPVLSNTTTEPASTMSPPPAK PPSGADSKTVKLKSPV TMSPPPAKKLALSAKK K T V A K K 2 0 1 0 0 0 1 0 0 0 2 3 1 0 5 4 5 0 0 2 0 26 2 2681.431 Q9P275;Q9P275-2;E9PEW0 Q9P275 662 687 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 4 4.2483E-05 56.562 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 35085000 17028000 1594600 10732000 2309100 1870100 1551400 8094 1576 8205 36338;36339;36340;36341;36342;36343 23981;23982;23983;23984;23985;23986 23982 6 TVKQEQINTEPLEDTVLSPTK ETFEPEDKTVKQEQIN DTVLSPTKKRKRQKGT K T V T K K 0 0 1 1 0 2 3 0 0 1 2 2 0 0 2 1 4 0 0 2 0 21 1 2369.2326 O15446;O15446-2 O15446 268 288 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes no 3 0.00043823 56.428 By MS/MS By matching By matching By matching By matching By matching 1 15305000 15305000 0 0 0 0 0 8095 706 8206 36344 23987 23987 1 TVLCGTCGQPADK AEYNLRSRTVLCGTCG TCGQPADKASASGSGA R T V D K A 1 0 0 1 2 1 0 2 0 0 1 1 0 0 1 0 2 0 0 1 0 13 0 1405.633 P02545;P02545-3;Q6UYC3;D6RAQ3;E7EUI9 P02545 585 597 LMNA Prelamin-A/C;Lamin-A/C yes no 2 0.0044253 62.162 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 53284000 3117500 11601000 0 3581400 10498000 24486000 8096 783 8207 36345;36346;36347;36348;36349 23988;23989;23990 23989 3 TVLCGTCGQPADKASASGSGAQVGGPISSGSSASSVTVTR AEYNLRSRTVLCGTCG ASSVTVTRSYRSVGGS R T V T R S 5 1 0 1 2 2 0 7 0 1 1 1 0 0 2 9 4 0 0 4 0 40 1 3751.7741 P02545;P02545-3;D6RAQ3;E7EUI9 P02545 585 624 LMNA Prelamin-A/C;Lamin-A/C yes no 3 6.8447E-33 59.793 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 18049000 10080000 0 7968400 0 0 0 8097 783 8208 36350;36351 23991;23992 23992 2 TVLHTGSAPSSSTPFNK QRMDTTGKTVLHTGSA SSSTPFNKEELSAILK K T V N K E 1 0 1 0 0 0 0 1 1 0 1 1 0 1 2 4 3 0 0 1 0 17 0 1729.8635 O14646-2;O14646 O14646-2 946 962 CHD1 Chromodomain-helicase-DNA-binding protein 1 yes no 3 0.036437 35.091 By matching By matching By matching By matching By MS/MS By matching 1 1462200 0 0 0 0 1462200 0 8098 695 8209 36352 23993 23993 1 TVLIACNVK GYTSGTFRTVLIACNV VLIACNVKQMSKDAQP R T V V K Q 1 0 1 0 1 0 0 0 0 1 1 1 0 0 0 0 1 0 0 2 0 9 0 1016.5689 P25205 P25205 258 266 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.011704 82.75 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 38279000 3272200 4970700 5031800 950220 4695400 19359000 8099 873 8210 36353;36354;36355;36356;36357;36358 23994 23994 1 TVLIACNVKQMSK GYTSGTFRTVLIACNV CNVKQMSKDAQPSFSA R T V S K D 1 0 1 0 1 1 0 0 0 1 1 2 1 0 0 1 1 0 0 2 0 13 1 1490.7949 P25205 P25205 258 270 MCM3 DNA replication licensing factor MCM3 yes yes 2;3 1.4327E-05 98.902 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 2 17887000 0 2279500 2314400 1309400 2531500 9452000 8100 873 8211 36359;36360;36361;36362;36363;36364;36365 23995;23996;23997;23998;23999 23995 5 TVLTGTKDAVCSGVTGAANVAK QTGMDTTKTVLTGTKD TGAANVAKGAVQMGVD K T V A K G 4 0 1 1 1 0 0 3 0 0 1 2 0 0 0 1 4 0 0 4 0 22 1 2119.0943 Q96Q06-2;Q96Q06 Q96Q06-2 842 863 PLIN4 Perilipin-4 yes no 3 3.7607E-06 74.308 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 12751000 0 0 4846500 0 0 7904800 8101 1413 8212 36366;36367 24000;24001 24000 2 TVLTGTKDTVCSGVTGAANVAK QTSVDTTKTVLTGTKD TGAANVAKGAVQTGVD K T V A K G 3 0 1 1 1 0 0 3 0 0 1 2 0 0 0 1 5 0 0 4 0 22 1 2149.1049 Q96Q06-2;Q96Q06 Q96Q06-2 710 731 PLIN4 Perilipin-4 yes no 3 8.1623E-92 127.37 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 32381000 9018100 4354800 8280200 1562000 0 9166200 8102 1413 8213 36368;36369;36370;36371;36372 24002;24003;24004;24005;24006 24003 5 TVLTGTKDTVCSGVTGAVNVAK QTGVDTAKTVLTGTKD TGAVNVAKGAVQTGLK K T V A K G 2 0 1 1 1 0 0 3 0 0 1 2 0 0 0 1 5 0 0 5 0 22 1 2177.1362 Q96Q06-2;Q96Q06 Q96Q06-2 743 764 PLIN4 Perilipin-4 yes no 3 2.8103E-23 98.562 By matching By MS/MS By matching By matching By matching By matching 1 18674000 0 18674000 0 0 0 0 8103 1413 8214 36373 24007;24008;24009 24008 3 TVLTGTKDTVCSGVTSAVNVAK QTGVDTTKTVLTGTKD TSAVNVAKGAVQGGLD K T V A K G 2 0 1 1 1 0 0 2 0 0 1 2 0 0 0 2 5 0 0 5 0 22 1 2207.1467 Q96Q06-2;Q96Q06 Q96Q06-2 512 533 PLIN4 Perilipin-4 yes no 2;3 1.4433E-185 152.09 By matching By MS/MS By matching By matching By matching By matching 2 1 120580000 0 116610000 0 3970700 0 0 8104 1413 8215 36374;36375;36376 24010;24011 24010 2 TVMDIDTSGTFNVSR ALSFNAFKTVMDIDTS SGTFNVSRVLYEKFFR K T V S R V 0 1 1 2 0 0 0 1 0 1 0 0 1 1 0 2 3 0 0 2 0 15 0 1641.7668 Q4VXZ8;Q9NUI1;Q9NUI1-3;H7C078 Q4VXZ8 120 134 DECR2 Peroxisomal 2,4-dienoyl-CoA reductase yes no 2 6.9292E-43 123.42 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 18170000 0 7179100 0 0 0 10991000 8105 1172 8216 36377;36378 24012;24013 24012 1 TVNGIENKSLSPDEER PVFDISEKTVNGIENK SLSPDEERLVSDIIDP K T V E R L 0 1 2 1 0 0 3 1 0 1 1 1 0 0 1 2 1 0 0 1 0 16 1 1786.8697 Q5UIP0-2;Q5UIP0;H7C2B5 Q5UIP0-2 2357 2372 RIF1 Telomere-associated protein RIF1 yes no 3 0.0097661 45.618 By matching By MS/MS By matching By matching By matching By matching 1 1 2223500 0 1245600 977940 0 0 0 8106 1201 8217 36379;36380 24014 24014 1 TVPEELVKPEELSK TERKKRGKTVPEELVK VKPEELSKYRQVASHV K T V S K Y 0 0 0 0 0 0 4 0 0 0 2 2 0 0 2 1 1 0 0 2 0 14 1 1596.8611 Q9UMS4;H0YGF3;F5GY56 Q9UMS4 193 206 PRPF19 Pre-mRNA-processing factor 19 yes no 2;3 4.5256E-05 92.65 By MS/MS By matching By MS/MS By matching By MS/MS By matching 2 1 1 36077000 14108000 0 8323600 0 13645000 0 8107 1613 8218 36381;36382;36383;36384 24015;24016;24017;24018;24019 24016 5 TVPVEAVTSK QVSSAYQKTVPVEAVT PVEAVTSKTSNIRANF K T V S K T 1 0 0 0 0 0 1 0 0 0 0 1 0 0 1 1 2 0 0 3 0 10 0 1029.5706 Q14247;Q14247-3;Q14247-2;E9PKG3;E9PP90;B4E358 Q14247 337 346 CTTN Src substrate cortactin yes no 2 0.0095763 75.566 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 19513000 1597500 2645100 3723100 2109200 3728700 5709900 8108 1104 8219 36385;36386;36387;36388;36389;36390 24020;24021;24022 24021 3 TVQGSGHQEHINIHK KEQRWGAKTVQGSGHQ QEHINIHKLRENVFQE K T V H K L 0 0 1 0 0 2 1 2 3 2 0 1 0 0 0 1 1 0 0 1 0 15 0 1683.8441 Q14247;Q14247-3;Q14247-2;H7C314 Q14247 43 57 CTTN Src substrate cortactin yes no 4 0.023727 39.961 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 6122600 0 1010700 1460100 573470 950550 2127800 8109 1104 8220 36391;36392;36393;36394;36395 24023;24024 24024 2 TVRFNVLKVTK GECRPLSKTVRFNVLK FNVLKVTKAAGTKKQF K T V T K A 0 1 1 0 0 0 0 0 0 0 1 2 0 1 0 0 2 0 0 3 0 11 2 1303.7976 P62280 P62280 137 147 RPS11 40S ribosomal protein S11 yes yes 3 0.014667 70.728 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 8144800 2987800 686400 1502800 2169900 797960 0 8110 989 8221 36396;36397;36398;36399;36400 24025;24026;24027 24025 3 TVRVDPDSQNHEK TKTRRRCKTVRVDPDS PDSQNHEKQESQDLRA K T V E K Q 0 1 1 2 0 1 1 0 1 0 0 1 0 0 1 1 1 0 0 2 0 13 1 1523.7328 Q9BXS6-4 Q9BXS6-4 94 106 NUSAP1 Nucleolar and spindle-associated protein 1 yes yes 3 0.0020236 83.869 By matching By matching By MS/MS By matching By matching By matching 1 1 2249900 0 1005500 1244400 0 0 0 8111 1464 8222 36401;36402 24028 24028 1 TVRVDPDSQQNHSEIK TKTRRRCKTVRVDPDS QQNHSEIKISNPTEFQ K T V I K I 0 1 1 2 0 2 1 0 1 1 0 1 0 0 1 2 1 0 0 2 0 16 1 1851.9075 Q9BXS6-2;Q9BXS6;E7ERR5;E9PB35 Q9BXS6-2 94 109 NUSAP1 Nucleolar and spindle-associated protein 1 yes no 3;4 6.6643E-18 101.2 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 53070000 1904700 12886000 9425400 2728200 5700800 20425000 8112 1463 8223 36403;36404;36405;36406;36407;36408;36409;36410;36411;36412;36413;36414 24029;24030;24031;24032;24033;24034;24035;24036;24037;24038;24039 24033 11 TVSEVSEQPKETSMTEPSEPGSKAEAK AASQGAEKTVSEVSEQ PGSKAEAKKALGGDVS K T V A K K 2 0 0 0 0 1 6 1 0 0 0 3 1 0 3 5 3 0 0 2 0 27 2 2862.3441 Q9UKJ3;Q9UKJ3-2 Q9UKJ3 457 483 GPATCH8 G patch domain-containing protein 8 yes no 4 0.0023824 38.279 By MS/MS By matching By matching By matching By matching By matching 1 2341700 2341700 0 0 0 0 0 8113 1601 8224 36415 24040 24040 1 TVSHLYQESISK SQENRITKTVSHLYQE LYQESISKQQPHISNE K T V S K Q 0 0 0 0 0 1 1 0 1 1 1 1 0 0 0 3 1 0 1 1 0 12 0 1390.7092 Q9C0D5;Q9C0D5-2 Q9C0D5 1822 1833 TANC1 Protein TANC1 yes no 3 0.0013246 90.614 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 6189500 0 679170 1128000 737410 2149900 1495000 8114 1473 8225 36416;36417;36418;36419;36420 24041;24042 24042 2 TVSQIISLQTLKK LLNKHGIKTVSQIISL ISLQTLKKEYKSYEAK K T V K K E 0 0 0 0 0 2 0 0 0 2 2 2 0 0 0 2 2 0 0 1 0 13 1 1457.8817 O76021;I3L3C4;I3L3U9;I3L234 O76021 125 137 RSL1D1 Ribosomal L1 domain-containing protein 1 yes no 3 4.4613E-75 142.12 By MS/MS By matching By matching By matching By matching By matching 1 12006000 12006000 0 0 0 0 0 8115 753 8226 36421 24043 24043 1 TVSYPDVSLEEQEK HSSGKLQKTVSYPDVS VSLEEQEKMDLKTSRE K T V E K M 0 0 0 1 0 1 3 0 0 0 1 1 0 0 1 2 1 0 1 2 0 14 0 1622.7675 P12757-5;P12757 P12757-5 430 443 SKIL Ski-like protein yes no 2 0.0011067 73.834 By MS/MS By matching By matching By matching By matching By matching 1 2533600 2533600 0 0 0 0 0 8116 829 8227 36422 24044 24044 1 TVTAAGAENIQQK SSDRGKKRTVTAAGAE GAENIQQKTDEKVDES R T V Q K T 3 0 1 0 0 2 1 1 0 1 0 1 0 0 0 0 2 0 0 1 0 13 0 1329.6888 Q29RF7 Q29RF7 1240 1252 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 2 0.029776 58.595 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 2303700 0 479630 492860 0 418240 913010 8117 1159 8228 36423;36424;36425;36426 24045 24045 0 TVTAAGAENIQQKTDEK SSDRGKKRTVTAAGAE IQQKTDEKVDESGPPA R T V E K V 3 0 1 1 0 2 2 1 0 1 0 2 0 0 0 0 3 0 0 1 0 17 1 1802.901 Q29RF7 Q29RF7 1240 1256 PDS5A Sister chromatid cohesion protein PDS5 homolog A yes yes 3 0.0024916 53.168 By matching By matching By MS/MS By matching By matching By matching 1 1 1 2437300 817090 0 958370 661840 0 0 8118 1159 8229 36427;36428;36429 24046;24047 24046 2 TVTITKEDESTEK KIAGMSQKTVTITKED KEDESTEKLSSVCMGQ K T V E K L 0 0 0 1 0 0 3 0 0 1 0 2 0 0 0 1 4 0 0 1 0 13 1 1479.7304 Q9NS91;H7C3I2 Q9NS91 371 383 RAD18 E3 ubiquitin-protein ligase RAD18 yes no 3 0.026375 46.069 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 3946500 629710 329410 828950 598940 462080 1097400 8119 1542 8230 36430;36431;36432;36433;36434;36435 24048 24048 1 TVTNAVVTVPAYFNDSQRQATK IAEAYLGKTVTNAVVT DSQRQATKDAGTIAGL K T V T K D 3 1 2 1 0 2 0 0 0 0 0 1 0 1 1 1 4 0 1 4 0 22 1 2409.2288 P11142;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PI65 P11142 138 159 HSPA8 Heat shock cognate 71 kDa protein yes no 3 1.1799E-09 84.113 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 36043000 0 24994000 0 3388700 7660800 0 8120 824 8231 36436;36437;36438 24049;24050;24051 24051 3 TVTSSGVQVSCHSCK CLSAYRVKTVTSSGVQ QVSCHSCKTSAIPQYH K T V C K T 0 0 0 0 2 1 0 1 1 0 0 1 0 0 0 4 2 0 0 3 0 15 0 1635.7345 O95789-1;O95789 O95789-1 311 325 ZMYM6 Zinc finger MYM-type protein 6 yes no 3 0.0074398 47.774 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1617400 0 590870 0 0 350570 675920 8121 775 8232 36439;36440;36441 24052 24052 1 TVVNKDVFRDPALK SVDIPLDKTVVNKDVF VFRDPALKRKARREAK K T V L K R 1 1 1 2 0 0 0 0 0 0 1 2 0 1 1 0 1 0 0 3 0 14 2 1600.8937 P61353 P61353 94 107 RPL27 60S ribosomal protein L27 yes yes 3;4 6.6725E-69 131.06 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 1 2 2 1 56679000 8030100 8736400 2765900 6898200 14836000 15413000 8122 982 8233 36442;36443;36444;36445;36446;36447;36448;36449;36450;36451 24053;24054;24055;24056;24057;24058;24059 24055 7 TVVSGSCAAHSLLITTEGK CLAGVRVRTVVSGSCA LLITTEGKLWSWGRNE R T V G K L 2 0 0 0 1 0 1 2 1 1 2 1 0 0 0 3 3 0 0 2 0 19 0 1929.983 Q9P258 Q9P258 152 170 RCC2 Protein RCC2 yes yes 2;3 0 291.18 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 3 2 1409100000 682770000 228220000 150820000 216780000 21992000 108490000 8123 1575 8234 36452;36453;36454;36455;36456;36457;36458;36459;36460;36461;36462;36463;36464;36465 24060;24061;24062;24063;24064;24065;24066;24067;24068;24069;24070;24071 24063 11 TVVTPLDMNRFQSK TRLQTHRKTVVTPLDM DMNRFQSKAFRAVVSQ K T V S K A 0 1 1 1 0 1 0 0 0 0 1 1 1 1 1 1 2 0 0 2 0 14 1 1634.845 Q92547 Q92547 776 789 TOPBP1 DNA topoisomerase 2-binding protein 1 yes yes 2;3 1.0915E-69 133.98 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 1 1 1 168400000 51997000 22076000 58990000 13451000 13926000 7961600 8124 1351 8235 36466;36467;36468;36469;36470;36471;36472;36473;36474 24072;24073;24074;24075;24076;24077;24078;24079;24080;24081 24074 9 TVWEISQK DDLKQLYKTVWEISQK TVWEISQKTVLKMAAE K T V Q K T 0 0 0 0 0 1 1 0 0 1 0 1 0 0 0 1 1 1 0 1 0 8 0 989.5182 P23921;H0YFI0;E9PD78;E9PL69;F5H861 P23921 682 689 RRM1 Ribonucleoside-diphosphate reductase large subunit;Ribonucleoside-diphosphate reductase yes no 2 0.021668 78.516 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 23070000 0 3591400 2085500 947860 0 16445000 8125 870 8236 36475;36476;36477;36478 24082 24082 1 TVYFAEEVQCEGNSFHK KKCGVCQKTVYFAEEV CEGNSFHKSCFLCMVC K T V H K S 1 0 1 0 1 1 3 1 1 0 0 1 0 2 0 1 1 0 1 2 0 17 0 2043.8996 P21291;B3KVC9;E9PS42 P21291 16 32 CSRP1 Cysteine and glycine-rich protein 1 yes no 2;3 1.3087E-131 145.94 By MS/MS By matching By matching By MS/MS By MS/MS By matching 2 2 2 210650000 150990000 0 0 43634000 16027000 0 8126 859 8237 36479;36480;36481;36482;36483;36484 24083;24084;24085;24086;24087;24088 24087 6 TVYHAEEVQCDGR NKCGACGRTVYHAEEV EEVQCDGRSFHRCCFL R T V G R S 1 1 0 1 1 1 2 1 1 0 0 0 0 0 0 0 1 0 1 2 0 13 0 1562.6784 Q16527;F8VW96;F8VQR7 Q16527 16 28 CSRP2 Cysteine and glycine-rich protein 2 yes no 2;3 1.9259E-05 97.463 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 1 1 1 2 26343000 698210 5422900 3882600 388260 4673000 11278000 8127 1152 8238 36485;36486;36487;36488;36489;36490;36491;36492 24089;24090;24091;24092;24093 24090 5 TVYPASYR ECNVGQIKTVYPASYR TVYPASYRFRQERSVP K T V Y R F 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 2 1 0 8 0 955.47633 Q9H211 Q9H211 241 248 CDT1 DNA replication factor Cdt1 yes yes 2 0.025361 75.213 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2166800 0 161850 343360 0 233700 1427900 8128 1485 8239 36493;36494;36495;36496 24094 24094 1 TWGRLSTQSNSNNIEPARTAGGSGLAR FLASLNPKTWGRLSTQ AGGSGLARAASKDTIS K T W A R A 3 3 3 0 0 1 1 4 0 1 2 0 0 0 1 4 3 1 0 0 0 27 2 2800.3965 Q14CA3;Q14669;Q14CF1 Q14CA3 1097 1123 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 4 3.0262E-06 58.758 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 10234000 1052000 1722600 2798200 1357500 1615500 1688600 8129 1122 8240 36497;36498;36499;36500;36501;36502 24095;24096;24097;24098 24097 4 TWIPEVHDQK AKVPKKAKTWIPEVHD IPEVHDQKADVSAWKD K T W Q K A 0 0 0 1 0 1 1 0 1 1 0 1 0 0 1 0 1 1 0 1 0 10 0 1251.6248 G3V529;Q9GZR7;F5H4J5 G3V529 136 145 DDX24 ATP-dependent RNA helicase DDX24 yes no 2;3 2.5444E-09 117.01 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 3 2 3 2 55408000 2835100 4827700 7274200 5818900 13899000 20753000 8130 588 8241 36503;36504;36505;36506;36507;36508;36509;36510;36511;36512;36513;36514;36515;36516;36517 24099;24100;24101;24102;24103;24104;24105;24106;24107;24108 24100 10 TWNDPSVQQDIK DAKRLIGRTWNDPSVQ PSVQQDIKFLPFKVVE R T W I K F 0 0 1 2 0 2 0 0 0 1 0 1 0 0 1 1 1 1 0 1 0 12 0 1429.6838 P11021;B4DEF7 P11021 102 113 HSPA5 78 kDa glucose-regulated protein yes no 2 0.020575 51.726 By matching By matching By matching By matching By matching By MS/MS 1 1 2403200 0 0 0 342690 0 2060600 8131 823 8242 36518;36519 24109 24109 1 TWNHFSDNEAERVK QKLRNSCKTWNHFSDN DNEAERVKMMEEVEKL K T W V K M 1 1 2 1 0 0 2 0 1 0 0 1 0 1 0 1 1 1 0 1 0 14 1 1731.7965 Q99543 Q99543 362 375 DNAJC2 DnaJ homolog subfamily C member 2 yes yes 4 0.0084677 52.5 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 6911700 291970 1252000 732210 817200 1441100 2377200 8132 1426 8243 36520;36521;36522;36523;36524;36525 24110 24110 1 TWTVVDAK ILQERVKKTWTVVDAK TWTVVDAKTLKKEDIQ K T W A K T 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 2 1 0 2 0 8 0 918.48108 P13010 P13010 275 282 XRCC5 X-ray repair cross-complementing protein 5 yes yes 2 0.019325 80.438 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 10667000 2104700 1121200 1688800 2679400 0 3073100 8133 830 8244 36526;36527;36528;36529;36530 24111 24111 1 TYADYESVNECMEGVCK PTKRPEGRTYADYESV ECMEGVCKMYEEHLKR R T Y C K M 1 0 1 1 2 0 3 1 0 0 0 1 1 0 0 1 1 0 2 2 0 17 0 2053.8067 G3V279;P84090 G3V279 18 34 ERH Enhancer of rudimentary homolog yes no 2 0 236.31 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 171000000 32034000 33682000 34039000 26878000 6009000 38354000 8134 581 8245 36531;36532;36533;36534;36535;36536 24112;24113;24114;24115;24116;24117;24118;24119 24116 8 TYDPSGDSTLPTCSK YEHKSEVKTYDPSGDS STLPTCSKKRKIEQVD K T Y S K K 0 0 0 2 1 0 0 1 0 0 1 1 0 0 2 3 3 0 1 0 0 15 0 1627.7036 Q9Y2X3 Q9Y2X3 427 441 NOP58 Nucleolar protein 58 yes yes 2 0.00060503 81.992 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 51235000 0 6677800 6880200 6162800 19330000 12184000 8135 1640 8246 36537;36538;36539;36540;36541 24120;24121;24122;24123 24121 4 TYDPSGDSTLPTCSKK YEHKSEVKTYDPSGDS TLPTCSKKRKIEQVDK K T Y K K R 0 0 0 2 1 0 0 1 0 0 1 2 0 0 2 3 3 0 1 0 0 16 1 1755.7985 Q9Y2X3 Q9Y2X3 427 442 NOP58 Nucleolar protein 58 yes yes 3 0.00068095 69.485 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 12703000 2686200 2447800 948520 2696000 0 3924000 8136 1640 8247 36542;36543;36544;36545;36546 24124;24125;24126;24127 24124 4 TYGADLASVDFQHASEDARK EFLVSTQKTYGADLAS HASEDARKTINQWVKG K T Y R K T 4 1 0 3 0 1 1 1 1 0 1 1 0 1 0 2 1 0 1 1 0 20 1 2180.0134 B4E3A8;P30740 B4E3A8 73 92 SERPINB1 Leukocyte elastase inhibitor yes no 3;4 0.00031763 57.708 By matching By MS/MS By matching By matching By matching By matching 2 2 46029000 0 42005000 0 4023700 0 0 8137 166 8248 36547;36548;36549;36550 24128;24129 24129 2 TYGGCEGPDAMYVK ________________ GPDAMYVKLISSDGHE K T Y V K L 1 0 0 1 1 0 1 3 0 0 0 1 1 0 1 0 1 0 2 1 0 14 0 1546.6432 E5RHG8;E5RJ89;Q15369 E5RHG8 7 20 TCEB1 Transcription elongation factor B polypeptide 1 yes no 2 7.7517E-31 118.73 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 21970000 2612900 3310400 3208900 1506400 1702800 9628500 8138 340 8249 36551;36552;36553;36554;36555;36556;36557 24130;24131;24132;24133;24134;24135 24132 5 TYHEVVDEIYFK KVQLYELKTYHEVVDE VVDEIYFKVTHVEPWE K T Y F K V 0 0 0 1 0 0 2 0 1 1 0 1 0 1 0 0 1 0 2 2 0 12 0 1541.7402 Q5VTL8;Q5VTL8-2 Q5VTL8 81 92 PRPF38B Pre-mRNA-splicing factor 38B yes no 2;3 3.6296E-76 138.63 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 2 1 44879000 0 17651000 8163600 15121000 3943400 0 8139 1203 8250 36558;36559;36560;36561;36562;36563 24136;24137;24138;24139;24140;24141 24141 6 TYIQTELPFKAK LPAEVKAKTYIQTELP TELPFKAKTLHEKTSH K T Y A K T 1 0 0 0 0 1 1 0 0 1 1 2 0 1 1 0 2 0 1 0 0 12 1 1437.7868 B7ZM82;B3KVH1;O95785;O95785-2 B7ZM82 687 698 WIZ Protein Wiz yes no 2;3 4.2826E-223 182.41 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 2 2 1 2 3 312230000 100310000 44723000 22974000 45471000 98749000 0 8140 212 8251 36564;36565;36566;36567;36568;36569;36570;36571;36572;36573 24142;24143;24144;24145;24146;24147;24148;24149 24143 8 TYKQPHLQTK NRINFYKKTYKQPHLQ KQPHLQTKEEQRKKRE K T Y T K E 0 0 0 0 0 2 0 0 1 0 1 2 0 0 1 0 2 0 1 0 0 10 1 1242.6721 Q9BXS6-2;Q9BXS6-3;Q9BXS6;E7ERR5;Q9BXS6-5;E9PB35;Q9BXS6-4 Q9BXS6-2 401 410 NUSAP1 Nucleolar and spindle-associated protein 1 no no 3 0.010439 73.841 By matching By matching By MS/MS By matching By matching By matching 1 1 1413300 0 474770 938540 0 0 0 8141 1463;1464 8252 36574;36575 24150 24150 1 TYNEPGSQVFK DLLAKNAKTYNEPGSQ EPGSQVFKDANSIKKI K T Y F K D 0 0 1 0 0 1 1 1 0 0 0 1 0 1 1 1 1 0 1 1 0 11 0 1268.6037 Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;Q86U86-8;Q86U86;E7EVG2;H0Y5B5;Q86U86-6 Q86U86-5 261 271 PBRM1 Protein polybromo-1 yes no 2 0.0050529 73.951 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 6793100 1640600 2792100 0 0 0 2360500 8142 1260 8253 36576;36577;36578 24151;24152 24152 2 TYNEPGSQVFKDANSIKK DLLAKNAKTYNEPGSQ KDANSIKKIFYMKKAE K T Y K K I 1 0 2 1 0 1 1 1 0 1 0 3 0 1 1 2 1 0 1 1 0 18 2 2025.0167 Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;Q86U86-8;Q86U86;E7EVG2;H0Y5B5;Q86U86-6 Q86U86-5 261 278 PBRM1 Protein polybromo-1 yes no 4 0.0014358 58.164 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 5663600 1176300 700620 993480 912310 890150 990740 8143 1260 8254 36579;36580;36581;36582;36583;36584 24153;24154;24155 24155 3 TYQVTPMTPR FQPLDGLKTYQVTPMT QVTPMTPRSANAFLTP K T Y P R S 0 1 0 0 0 1 0 0 0 0 0 0 1 0 2 0 3 0 1 1 0 10 0 1192.591 A8MTM6;Q15398;Q15398-1 A8MTM6 322 331 DLGAP5 Disks large-associated protein 5 yes no 2 0.030524 57.149 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 20970000 2393700 2647800 3518800 0 3030500 9379300 8144 42 8255 36585;36586;36587;36588;36589 24156 24156 1 TYSLSSSFSSSSSTRK QTSNLAHKTYSLSSSF SSSSSTRKRGPSEETG K T Y R K R 0 1 0 0 0 0 0 0 0 0 1 1 0 1 0 9 2 0 1 0 0 16 1 1710.8061 O60563 O60563 558 573 CCNT1 Cyclin-T1 yes yes 3 0.00038212 70.47 By MS/MS By MS/MS By matching By MS/MS By matching By matching 2 1 2 1 1 24080000 4839200 7698500 7196100 3895400 0 451270 8145 732 8256 36590;36591;36592;36593;36594;36595;36596 24157;24158;24159;24160 24160 4 TYSVVPMTSR SQRALQLRTYSVVPMT SVVPMTSRLGLIEWLE R T Y S R L 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 2 2 0 1 2 0 10 0 1139.5645 P78527 P78527 3790 3799 PRKDC DNA-dependent protein kinase catalytic subunit yes yes 2 0.0098548 74.841 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 9456100 155390 0 0 572100 761190 7967400 8146 1012 8257 36597;36598;36599;36600 24161 24161 1 TYTIANQFPLNK NIQMTLPKTYTIANQF ANQFPLNKLTELLRHD K T Y N K L 1 0 2 0 0 1 0 0 0 1 1 1 0 1 1 0 2 0 1 0 0 12 0 1408.7351 Q9NSD9;F5H6Y1 Q9NSD9 384 395 FARSB Phenylalanine--tRNA ligase beta subunit yes no 2 9.5433E-05 98.754 By matching By MS/MS By matching By matching By matching By matching 1 14406000 0 14406000 0 0 0 0 8147 1543 8258 36601 24162 24162 1 TYTWNTKEEAK EESQPAKKTYTWNTKE WNTKEEAKQAFKELLK K T Y A K Q 1 0 1 0 0 0 2 0 0 0 0 2 0 0 0 0 3 1 1 0 0 11 1 1369.6514 E9PHJ7;O75400-2;O75400-3;F8W9L2;O75400;F5H578 E9PHJ7 256 266 PRPF40A Pre-mRNA-processing factor 40 homolog A yes no 3 0.02964 51.727 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 3231500 0 763390 0 385010 715090 1368000 8148 438 8259 36602;36603;36604;36605 24163 24163 1 TYVTQTLLK YGHTASGKTYVTQTLL YVTQTLLKTLELPHVF K T Y L K T 0 0 0 0 0 1 0 0 0 0 2 1 0 0 0 0 3 0 1 1 0 9 0 1065.607 O43913;O43913-2;G3V0H0 O43913 44 52 ORC5 Origin recognition complex subunit 5 yes no 2 0.0071717 89.029 By matching By matching By matching By matching By matching By MS/MS 1 1 5953900 0 0 0 738570 0 5215300 8149 724 8260 36606;36607 24164 24164 1 TYVVTGNMGSNDK PVFRPGSKTYVVTGNM GNMGSNDKVGDFVATD K T Y D K V 0 0 2 1 0 0 0 2 0 0 0 1 1 0 0 1 2 0 1 2 0 13 0 1384.6293 Q02413 Q02413 391 403 DSG1 Desmoglein-1 yes yes 2 0.0090312 56.569 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 5057000 0 0 2266000 1151800 754180 885020 8150 1033 8261 36608;36609;36610;36611 24165 24165 1 VAAAASCLSQK MVHYHPSKVAAAASCL AASCLSQKVLGQGKWN K V A Q K V 4 0 0 0 1 1 0 0 0 0 1 1 0 0 0 2 0 0 0 1 0 11 0 1104.5597 O95067 O95067 308 318 CCNB2 G2/mitotic-specific cyclin-B2 yes yes 2 0.0044026 77.062 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 11569000 1969300 1119800 1352600 1246000 3249500 2632000 8151 761 8262 36612;36613;36614;36615;36616;36617 24166;24167;24168;24169;24170;24171 24169 6 VAAAMPVR LEKSVSQKVAAAMPVR VAAAMPVRAADKLAPA K V A V R A 3 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 2 0 8 0 813.45309 Q13573;G3V3A4;E9PGQ7 Q13573 159 166 SNW1 SNW domain-containing protein 1 yes no 2 0.020937 79.116 By matching By matching By matching By matching By matching By MS/MS 1 1 1858000 143580 0 0 0 0 1714400 8152 583 8263 36618;36619 24172 24172 1 VAAAMPVRAADK LEKSVSQKVAAAMPVR MPVRAADKLAPAQYIR K V A D K L 5 1 0 1 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 2 0 12 1 1198.6492 Q13573;G3V3A4;E9PGQ7 Q13573 159 170 SNW1 SNW domain-containing protein 1 yes no 2;3 0.0018213 81.525 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 44752000 5523700 5830800 12246000 3932100 6362200 10857000 8153 583 8264 36620;36621;36622;36623;36624;36625;36626;36627;36628;36629;36630;36631;36632 24173;24174;24175;24176;24177;24178;24179;24180;24181;24182 24181 10 VAADLQLSTPQK TESCSTLKVAADLQLS LQLSTPQKASQHQVLF K V A Q K A 2 0 0 1 0 2 0 0 0 0 2 1 0 0 1 1 1 0 0 1 0 12 0 1269.6929 Q9H582-2;Q9H582;F5H7T9 Q9H582-2 157 168 ZNF644 Zinc finger protein 644 yes no 2 1.0386E-18 117.95 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 15400000 0 2982800 2045700 776120 1903300 7691800 8154 1492 8265 36633;36634;36635;36636;36637 24183;24184;24185;24186 24183 4 VAAERAESCGSGNSTGYQIR SAISVAERVAAERAES NSTGYQIRLQSRLPRK R V A I R L 3 2 1 0 1 1 2 3 0 1 0 0 0 0 0 3 1 0 1 1 0 20 1 2111.9654 Q9H2U1-3;Q9H2U1-2;F5GZS0;Q9H2U1;E7EWK3 Q9H2U1-3 276 295 DHX36 Probable ATP-dependent RNA helicase DHX36 yes no 3 0.035362 33.764 By matching By matching By matching By matching By matching By MS/MS 1 783870 0 0 0 0 0 783870 8155 502 8266 36638 24187 24187 1 VAAETQSPSLFGSTK NSESESNKVAAETQSP PSLFGSTKLQQESTFL K V A T K L 2 0 0 0 0 1 1 1 0 0 1 1 0 1 1 3 2 0 0 1 0 15 0 1521.7675 Q9UKX7-2;Q9UKX7 Q9UKX7-2 187 201 NUP50 Nuclear pore complex protein Nup50 yes no 2 0.004001 55.335 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 2 1 6359400 1016200 1983400 793850 1294400 1271500 0 8156 1603 8267 36639;36640;36641;36642;36643;36644 24188;24189;24190;24191 24191 4 VAAGLQIK PGNSQVARVAAGLQIK VAAGLQIKNSLTSKDP R V A I K N 2 0 0 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 0 1 0 8 0 798.49634 Q14974 Q14974 55 62 KPNB1 Importin subunit beta-1 yes yes 2 0.008455 99.375 By matching By matching By matching By matching By matching By MS/MS 1 1 2407200 0 0 1045200 0 0 1362000 8157 1119 8268 36645;36646 24192 24192 1 VAAQNLIQNTNIDNGQK ESLQTLMKVAAQNLIQ TNIDNGQKSSDGPIQR K V A Q K S 2 0 4 1 0 3 0 1 0 2 1 1 0 0 0 0 1 0 0 1 0 17 0 1839.9439 B4DGM4;Q9NX70 B4DGM4 16 32 MED29 Mediator of RNA polymerase II transcription subunit 29 yes no 2 0.0003962 71.781 By MS/MS By matching By matching By matching By matching By matching 1 1 1603400 1016400 0 0 0 0 587090 8158 88 8269 36647;36648 24193 24193 1 VAASHHPPDRPPDPFSTL PILVPGIKVAASHHPP PPDPFSTL________ K V A T L - 2 1 0 2 0 0 0 0 2 0 1 0 0 1 5 2 1 0 0 1 0 18 1 1939.9541 Q12857-2 Q12857-2 481 498 NFIA Nuclear factor 1 A-type yes yes 3;4 1.0244E-73 127.07 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 3 1 302400000 63203000 70959000 78999000 23704000 17871000 47667000 8159 1062 8270 36649;36650;36651;36652;36653;36654;36655;36656;36657;36658;36659;36660 24194;24195;24196;24197;24198;24199;24200;24201;24202;24203 24201 10 VAASPKSPTAALNESLVECPK GETENREKVAASPKSP ESLVECPKCNIQYPAT K V A P K C 4 0 1 0 1 0 2 0 0 0 2 2 0 0 3 3 1 0 0 2 0 21 1 2168.1147 Q53EZ4 Q53EZ4 422 442 CEP55 Centrosomal protein of 55 kDa yes yes 3 2.2159E-23 100.41 By matching By MS/MS By matching By matching By matching By matching 1 1 10465000 0 9411700 0 1053300 0 0 8160 1174 8271 36661;36662 24204 24204 1 VAATSVITIVKSK LGPLVPGKVAATSVIT VITIVKSKTDARS___ K V A S K T 2 0 0 0 0 0 0 0 0 2 0 2 0 0 0 2 2 0 0 3 0 13 1 1315.8075 O15525 O15525 145 157 MAFG Transcription factor MafG yes yes 3 0.0045118 62.162 By MS/MS By matching By matching By matching By matching By matching 1 1298800 1298800 0 0 0 0 0 8161 707 8272 36663 24205 24205 1 VACIGAWHPAR KTHRGLRKVACIGAWH IGAWHPARVAFSVARA K V A A R V 3 1 0 0 1 0 0 1 1 1 0 0 0 0 1 0 0 1 0 1 0 11 0 1236.6186 P39023;G5E9G0;B5MCW2;H7C422;Q92901 P39023 251 261 RPL3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like yes no 2;3 0.0015475 87.149 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 3 1 25483000 4672800 1353300 851440 5314400 5248700 8042400 8162 905 8273 36664;36665;36666;36667;36668;36669;36670;36671 24206;24207;24208 24208 3 VACIGAWHPARVAFSVAR KTHRGLRKVACIGAWH RVAFSVARAGQKGYHH K V A A R A 5 2 0 0 1 0 0 1 1 1 0 0 0 1 1 1 0 1 0 3 0 18 1 1967.0312 P39023;G5E9G0;B5MCW2;H7C422 P39023 251 268 RPL3 60S ribosomal protein L3 yes no 4 0.0018377 63.754 By matching By matching By matching By MS/MS By matching By matching 1 14862000 0 0 0 14862000 0 0 8163 905 8274 36672 24209 24209 1 VADGFKVVAR THGDSVDKVADGFKVV DGFKVVARSGNIVAGI K V A A R S 2 1 0 1 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 3 0 10 1 1060.6029 F8W720;B4DUT7;P49915 F8W720 61 70 GMPS GMP synthase [glutamine-hydrolyzing] yes no 2 0.0044404 103.26 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 7851200 1340500 1730600 0 0 1035600 3744500 8164 129 8275 36673;36674;36675;36676 24210;24211;24212 24212 3 VADLTEQYNEQYGAVR CPIDRSGRVADLTEQY NEQYGAVRTPYTMSYG R V A V R T 2 1 1 1 0 2 2 1 0 0 1 0 0 0 0 0 1 0 2 2 0 16 0 1854.8748 Q9BWF3;B0LM41 Q9BWF3 183 198 RBM4;RBM14 RNA-binding protein 4;RNA-binding protein 14 yes no 2 0.0062233 47.64 By matching By matching By matching By matching By matching By MS/MS 1 1 2003100 0 786460 0 0 0 1216700 8165 1457 8276 36677;36678 24213 24213 1 VADNAQQQYVR LELRGLARVADNAQQQ NAQQQYVRSRPAPSPE R V A V R S 2 1 1 1 0 3 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 11 0 1290.6317 Q8TDD1;Q8TDD1-2 Q8TDD1 511 521 DDX54 ATP-dependent RNA helicase DDX54 yes no 2 8.629E-30 127.83 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1 1 10398000 550130 986210 3970100 595210 2034300 2261800 8166 1336 8277 36679;36680;36681;36682;36683;36684;36685 24214;24215;24216;24217;24218;24219;24220 24218 7 VADWTGATYQDK SKGDRLGKVADWTGAT TGATYQDKRYTNKYSS K V A D K R 2 0 0 2 0 1 0 1 0 0 0 1 0 0 0 0 2 1 1 1 0 12 0 1353.6201 B0QYA5;B4DVY1;A8MWD3;O15371;B0QYA8;B0QYA6;B0QYA7 B0QYA5 42 53 EIF3D Eukaryotic translation initiation factor 3 subunit D yes no 2 0.00065502 93.766 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 12838000 817000 1739300 2248100 1736600 2388500 3908200 8167 50 8278 36686;36687;36688;36689;36690;36691 24221;24222;24223 24222 3 VAEDEAEAAAAAK KNGLVKIKVAEDEAEA AEAAAAAKFTGLSKEE K V A A K F 7 0 0 1 0 0 3 0 0 0 0 1 0 0 0 0 0 0 0 1 0 13 0 1244.5885 F5H867;F5H0E2;H0YFS2;B4E2Z3;P08195-2;P08195-3;F5GZS6;P08195;P08195-4 F5H867 47 59 SLC3A2 4F2 cell-surface antigen heavy chain yes no 2 5.9307E-24 114.87 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 10244000 428730 1234300 827460 751850 2265500 4735900 8168 163 8279 36692;36693;36694;36695;36696;36697 24224;24225;24226;24227;24228;24229 24225 5 VAEDFVSPEHVK HNLYSCIKVAEDFVSP FVSPEHVKHCFWLTQE K V A V K H 1 0 0 1 0 0 2 0 1 0 0 1 0 1 1 1 0 0 0 3 0 12 0 1355.6721 Q9Y4C1;F5H4E6;F5H070;Q7LBC6-3;F5H275;Q7LBC6-2;H0YH24;Q7LBC6 Q9Y4C1 1260 1271 KDM3A;KDM3B Lysine-specific demethylase 3A;Lysine-specific demethylase 3B yes no 3 0.01646 70.089 By matching By matching By matching By matching By matching By MS/MS 2 0 0 0 0 0 0 0 8169 516 8280 36698;36699 24230;24231 24230 2 VAEEAGEKGPTPPLPSAPLAPEK DQGSNSEKVAEEAGEK SAPLAPEKDSALVPGA K V A E K D 4 0 0 0 0 0 4 2 0 0 2 2 0 0 6 1 1 0 0 1 0 23 1 2284.1951 Q14865-2;Q14865 Q14865-2 286 308 ARID5B AT-rich interactive domain-containing protein 5B yes no 3 3.3177E-14 84.689 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 21411000 3058900 8040700 6494900 3101300 715140 0 8170 1117 8281 36700;36701;36702;36703;36704 24232;24233;24234 24232 3 VAEEEETSVKK VEEEEEEKVAEEEETS EEETSVKKKKKRGKKK K V A K K K 1 0 0 0 0 0 4 0 0 0 0 2 0 0 0 1 1 0 0 2 0 11 1 1247.6245 Q9Y2X3 Q9Y2X3 476 486 NOP58 Nucleolar protein 58 yes yes 3 0.0093167 57.149 By matching By matching By MS/MS By matching By matching By matching 1 1 1445600 0 0 1197700 0 247890 0 8171 1640 8282 36705;36706 24235 24235 1 VAEHHVATLSGHSQEVCGLR HIHHHDVRVAEHHVAT SQEVCGLRWAPDGRHL R V A L R W 2 1 0 0 1 1 2 2 3 0 2 0 0 0 0 2 1 0 0 3 0 20 0 2186.0651 B4E1H5;Q12834 B4E1H5 273 292 CDC20 Cell division cycle protein 20 homolog yes no 4 2.6573E-27 105.5 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 12980000 0 4429400 1193900 1053300 1100000 5203100 8172 157 8283 36707;36708;36709;36710;36711 24236;24237;24238;24239;24240;24241;24242 24239 7 VAEPGAEATSSTGEESGSEHPPAVPMHNK GLKALKARVAEPGAEA PAVPMHNKRKRPRKKS R V A N K R 4 0 1 0 0 0 5 3 2 0 0 1 1 0 4 4 2 0 0 2 0 29 0 2902.3039 Q14684-2;Q14684 Q14684-2 425 453 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 3;4 3.0075E-12 59.55 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 3 4 2 3 4 3 231580000 48014000 18366000 31008000 27378000 70786000 36031000 8173 1111 8284;8285 36712;36713;36714;36715;36716;36717;36718;36719;36720;36721;36722;36723;36724;36725;36726;36727;36728;36729;36730 24243;24244;24245;24246;24247;24248;24249;24250;24251;24252 24248 137 7 VAEQERTAQQLR ELIPLRQKVAEQERTA ERTAQQLRAEKASYAE K V A L R A 2 2 0 0 0 3 2 0 0 0 1 0 0 0 0 0 1 0 0 1 0 12 1 1427.7481 Q14980-2;Q14980;F5H2L0;H0YFY6;H0YH75 Q14980-2 1416 1427 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.0030942 72.152 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 7560500 1556000 0 2077700 1247200 2679600 0 8174 1121 8286 36731;36732;36733;36734 24253;24254 24254 2 VAEQERTAQQLRAEK ELIPLRQKVAEQERTA AQQLRAEKASYAEQLS K V A E K A 3 2 0 0 0 3 3 0 0 0 1 1 0 0 0 0 1 0 0 1 0 15 2 1755.9228 Q14980-2;Q14980;F5H2L0;H0YFY6;H0YH75 Q14980-2 1416 1430 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3;4 0.0077039 53.3 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 33526000 6842100 4391700 7893500 7174600 3769000 3454900 8175 1121 8287 36735;36736;36737;36738;36739;36740 24255;24256;24257;24258 24255 4 VAERPQHMLMR YLLKINGKVAERPQHM RPQHMLMRVSVGIHKE K V A M R V 1 2 0 0 0 1 1 0 1 0 1 0 2 0 1 0 0 0 0 1 0 11 1 1366.6962 P23921;H0YFI0;E9PD78 P23921 163 173 RRM1 Ribonucleoside-diphosphate reductase large subunit;Ribonucleoside-diphosphate reductase yes no 3 0.019492 56.404 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2787400 0 108980 217070 0 0 2461400 8176 870 8288 36741;36742;36743 24259 24259 1 VAESAQSPAAAHTTDTAGYNAMEESVSR ALKVPQLKVAESAQSP AMEESVSREKPELTAS K V A S R E 7 1 1 1 0 1 3 1 1 0 0 0 1 0 1 4 3 0 1 2 0 28 0 2850.2726 E9PFZ0;P38398-4;P38398-2;P38398;E9PFC7;E7EP70;B7ZA85;E7EUM2;P38398-6;E7ETR2;P38398-3;H0Y8B8;G3XAC3;P38398-5 E9PFZ0 1560 1587 BRCA1 Breast cancer type 1 susceptibility protein yes no 3 0.00034844 41.047 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1976800 0 0 1147500 0 829290 0 8177 426 8289 36744;36745 24260;24261;24262 24261 3 VAEVAPEERENVAVAK EERTDGERVAEVAPEE RENVAVAKLQESQPGN R V A A K L 4 1 1 0 0 0 4 0 0 0 0 1 0 0 1 0 0 0 0 4 0 16 1 1709.8948 Q6IQ49-2;C9JIQ2;Q6IQ49;Q6IQ49-3 Q6IQ49-2 342 357 SDE2 Protein SDE2 homolog yes no 3 0.036213 37.654 By matching By matching By matching By matching By matching By MS/MS 1 1 1773500 0 530300 0 0 0 1243200 8178 249 8290 36746;36747 24263 24263 1 VAEVQQVLRPAEK SLRLIQDRVAEVQQVL QVLRPAEKLVTSMTKQ R V A E K L 2 1 0 0 0 2 2 0 0 0 1 1 0 0 1 0 0 0 0 3 0 13 1 1465.8253 Q13751 Q13751 1015 1027 LAMB3 Laminin subunit beta-3 yes yes 3 0.0059126 60.157 By matching By matching By matching By matching By matching By MS/MS 1 1750000 0 0 0 0 0 1750000 8179 1091 8291 36748 24264 24264 1 VAFSEITSPSK SPGRIKRKVAFSEITS SEITSPSKRSQPDKLQ K V A S K R 1 0 0 0 0 0 1 0 0 1 0 1 0 1 1 3 1 0 0 1 0 11 0 1164.6027 Q13415 Q13415 266 276 ORC1 Origin recognition complex subunit 1 yes yes 2 3.7715E-05 102.05 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 2 1 90819000 12887000 17778000 18893000 0 16520000 24741000 8180 1080 8292 36749;36750;36751;36752;36753;36754 24265;24266;24267;24268;24269;24270;24271 24266 6 VAGGAAPSKPASAK AVKKKPQKVAGGAAPS PSKPASAKKGKAESSN K V A A K K 5 0 0 0 0 0 0 2 0 0 0 2 0 0 2 2 0 0 0 1 0 14 1 1210.667 Q14978;Q14978-3;Q14978-2 Q14978 497 510 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 2;3 0.0026222 65.495 By matching By MS/MS By MS/MS By matching By MS/MS By matching 2 2 2 2 1 5480100 818980 2268200 1176800 0 875470 340630 8181 1120 8293 36755;36756;36757;36758;36759;36760;36761;36762;36763 24272;24273;24274;24275 24274 4 VAGHSLGYGFVNYVTAK SAKLIRDKVAGHSLGY FVNYVTAKDAERAINT K V A A K D 2 0 1 0 0 0 0 3 1 0 1 1 0 1 0 1 1 0 2 3 0 17 0 1781.9101 Q15717 Q15717 56 72 ELAVL1 ELAV-like protein 1 yes yes 3 3.004E-15 101.08 By matching By MS/MS By matching By matching By matching By matching 1 44148000 0 44148000 0 0 0 0 8182 1146 8294 36764 24276 24276 1 VAGIESHSELQISR ELQEAKEKVAGIESHS HSELQISRQQNELAEL K V A S R Q 1 1 0 0 0 1 2 1 1 2 1 0 0 0 0 3 0 0 0 1 0 14 0 1524.7896 Q14980-2;Q14980 Q14980-2 856 869 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 3.2633E-20 110.15 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 12669000 2486800 5067000 1184400 0 0 3930400 8183 1121 8295 36765;36766;36767;36768 24277;24278;24279 24278 3 VAGQDGSVVQFKIK NNDHINLKVAGQDGSV SVVQFKIKRHTPLSKL K V A I K R 1 0 0 1 0 2 0 2 0 1 0 2 0 1 0 1 0 0 0 3 0 14 1 1474.8144 P61956-2;Q6EEV6;P61956;H7BZT4;P55854;A8MUA9;B4DUW4;A8MU27 P61956-2 22 35 SUMO2;SUMO4;SUMO3 Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 4;Small ubiquitin-related modifier 3 yes no 3 0.0056841 55.724 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 5041500 1449000 974810 0 621570 0 1996200 8184 43 8296 36769;36770;36771;36772 24280;24281 24281 2 VAHEINHGIGQAGK GLNHGMDKVAHEINHG HGIGQAGKEAEKLGHG K V A G K E 2 0 1 0 0 1 1 3 2 2 0 1 0 0 0 0 0 0 0 1 0 14 0 1429.7426 E9PBV3;Q6UWP8 E9PBV3 97 110 SBSN Suprabasin yes no 3 0.0025534 60.937 By matching By matching By MS/MS By matching By matching By matching 1 1 3473500 0 0 2997000 476440 0 0 8185 409 8297 36773;36774 24282 24282 1 VAIESAVQQK ADPSTVAKVAIESAVQ IESAVQQKQQHPPTYV K V A Q K Q 2 0 0 0 0 2 1 0 0 1 0 1 0 0 0 1 0 0 0 2 0 10 0 1071.5924 Q68CP9-3;Q68CP9;F8VWP4;Q68CP9-2;E7ENG3;F8W108;F8WCU9 Q68CP9-3 1568 1577 ARID2 AT-rich interactive domain-containing protein 2 yes no 2 0.016158 66.92 By matching By matching By matching By matching By matching By MS/MS 1 1 1 6095500 0 1334700 1189900 0 0 3570900 8186 1215 8298 36775;36776;36777 24283 24283 1 VAIHYINPPNPAKDNFTFK ALGSIEGRVAIHYINP AKDNFTFKCHRSNGTN R V A F K C 2 0 3 1 0 0 0 0 1 2 0 2 0 2 3 0 1 0 1 1 0 19 1 2185.132 P78406;E9PQ57 P78406 240 258 RAE1 mRNA export factor yes no 4 0.0003524 69.069 By matching By matching By matching By MS/MS By matching By matching 1 4800600 0 0 0 4800600 0 0 8187 463 8299 36778 24284 24284 1 VALSSETEVALAR TEISSAEKVALSSETE ETEVALARDMTLPPET K V A A R D 3 1 0 0 0 0 2 0 0 0 2 0 0 0 0 2 1 0 0 2 0 13 0 1344.7249 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0 453 465 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2 5.2485E-156 166.24 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 46322000 32688000 2696900 0 1789600 0 9147000 8188 388 8300 36779;36780;36781;36782 24285;24286;24287 24287 3 VAMILDPQQK FKVHPAHKVAMILDPQ MILDPQQKLRPVPPYQ K V A Q K L 1 0 0 1 0 2 0 0 0 1 1 1 1 0 1 0 0 0 0 1 0 10 0 1141.6165 Q5T7W0-2;Q5T7W0 Q5T7W0-2 711 720 ZNF618 Zinc finger protein 618 yes no 2 0.029598 57.532 By matching By MS/MS By matching By matching By matching By matching 1 1299600 0 1299600 0 0 0 0 8189 1195 8301 36783 24288 24288 1 VANPSSDADGQSLK KLAPLGLKVANPSSDA DADGQSLKVMPCLAPI K V A L K V 2 0 1 2 0 1 0 1 0 0 1 1 0 0 1 3 0 0 0 1 0 14 0 1387.6579 F5H7K2;Q8IWI9;E7ENI0 F5H7K2 2787 2800 MGA MAX gene-associated protein yes no 2 0.013114 48.608 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1714000 0 286000 0 0 896260 531750 8190 351 8302 36784;36785;36786 24289 24289 1 VANTSSFHTTPNTSLGMVQATPSK KEGCETHKVANTSSFH MVQATPSKVQPSPTVH K V A S K V 2 0 2 0 0 1 0 1 1 0 1 1 1 1 2 4 5 0 0 2 0 24 0 2475.2064 F5GZ80;E9PC26;F5GXI5;O43683 F5GZ80 432 455 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 yes no 3 6.4155E-09 67.877 By matching By matching By matching By matching By matching By MS/MS 1 2663600 0 0 0 0 0 2663600 8191 410 8303 36787 24290;24291 24291 2 VAPAPAAADAEVEQTDAESK EAESAQTRVAPAPAAA EQTDAESKDAVPTE__ R V A S K D 7 0 0 2 0 1 3 0 0 0 0 1 0 0 2 1 1 0 0 2 0 20 0 1968.9276 O43823 O43823 667 686 AKAP8 A-kinase anchor protein 8 yes yes 2 0.0047866 45.844 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 12159000 0 2604300 2259000 1218400 2970500 3106800 8192 721 8304 36788;36789;36790;36791;36792 24292;24293;24294 24293 3 VAPAPAVVK GKKAKGKKVAPAPAVV APAPAVVKKQEAKKVV K V A V K K 3 0 0 0 0 0 0 0 0 0 0 1 0 0 2 0 0 0 0 3 0 9 0 850.52764 P62424;Q5T8U3 P62424 12 20 RPL7A 60S ribosomal protein L7a yes no 2 0.0063238 92.47 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 12600000 2441600 1988900 2004100 1088900 2904800 2171800 8193 991 8305 36793;36794;36795;36796;36797;36798 24295;24296;24297;24298;24299 24299 5 VAPEEHPVLLTEAPLNPK HTFYNELRVAPEEHPV TEAPLNPKANREKMTQ R V A P K A 2 0 1 0 0 0 3 0 1 0 3 1 0 0 4 0 1 0 0 2 0 18 0 1953.0571 F5H0N0;B4E335;P63261;P60709;I3L3I4;G5E9R0;I3L3R2;E7EVS6;I3L3I0;I3L1U9;B4DW52;I3L4N8;F5GYT4 F5H0N0 96 113 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 3 3.0362E-32 107.98 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 385820000 44976000 126800000 83556000 0 42306000 88182000 8194 164 8306 36799;36800;36801;36802;36803;36804 24300;24301;24302;24303;24304;24305 24301 6 VAPEEHPVLLTEAPLNPKANR HTFYNELRVAPEEHPV PLNPKANREKMTQIMF R V A N R E 3 1 2 0 0 0 3 0 1 0 3 1 0 0 4 0 1 0 0 2 0 21 1 2294.2383 F5H0N0;B4E335;P63261;P60709;I3L3I4;G5E9R0;I3L3R2;E7EVS6;I3L3I0;I3L1U9;B4DW52;I3L4N8;F5GYT4 F5H0N0 96 116 ACTG1;ACTB Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 4 0.0011826 52.731 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 16161000 3233000 12928000 0 0 0 0 8195 164 8307 36805;36806 24306;24307 24306 0 VAPERLFGSAANVVSAK YWCVTATRVAPERLFG AANVVSAKRNRLAPAH R V A A K R 4 1 1 0 0 0 1 1 0 0 1 1 0 1 1 2 0 0 0 3 0 17 1 1714.9366 O96006 O96006 616 632 ZBED1 Zinc finger BED domain-containing protein 1 yes yes 3 0.0036707 50.188 By matching By MS/MS By matching By matching By matching By matching 1 21045000 0 21045000 0 0 0 0 8196 778 8308 36807 24308 24308 1 VAPVINNGSPTILGK LSSLTPAKVAPVINNG GSPTILGKRSYEQHNG K V A G K R 1 0 2 0 0 0 0 2 0 2 1 1 0 0 2 1 1 0 0 2 0 15 0 1478.8457 Q13330;Q13330-3;E7ESY4;E7EN71;H0Y4T7;F8W9Y9 Q13330 568 582 MTA1 Metastasis-associated protein MTA1 yes no 2 4.3587E-56 128.95 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 142360000 0 49147000 42467000 2526000 0 48224000 8197 1078 8309 36808;36809;36810;36811 24309;24310;24311;24312 24312 3 VAPVINNGSPTILGKR LSSLTPAKVAPVINNG SPTILGKRSYEQHNGV K V A K R S 1 1 2 0 0 0 0 2 0 2 1 1 0 0 2 1 1 0 0 2 0 16 1 1634.9468 Q13330;Q13330-3;E7ESY4;E7EN71;H0Y4T7;F8W9Y9 Q13330 568 583 MTA1 Metastasis-associated protein MTA1 yes no 3 0.001007 59.709 By matching By MS/MS By matching By matching By matching By matching 1 1 2422100 0 1677700 0 0 0 744350 8198 1078 8310 36812;36813 24313 24313 1 VAPVRVGTQAPR TNTTASAKVAPVRVGT RVGTQAPRKAGTATSP K V A P R K 2 2 0 0 0 1 0 1 0 0 0 0 0 0 2 0 1 0 0 3 0 12 1 1249.7255 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 656 667 TCOF1 Treacle protein no no 3 0.0018369 79.659 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 12384000 3499000 1831200 1391000 1887900 2428500 1346100 8199 1082;383 8311 36814;36815;36816;36817;36818;36819;36820 24314;24315;24316;24317;24318;24319;24320 24320 7 VAPVRVGTQAPRK TNTTASAKVAPVRVGT VGTQAPRKAGTATSPA K V A R K A 2 2 0 0 0 1 0 1 0 0 0 1 0 0 2 0 1 0 0 3 0 13 2 1377.8205 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 656 668 TCOF1 Treacle protein no no 3 0.0049159 80.245 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 1 131860000 23426000 22456000 12910000 20586000 30429000 22053000 8200 1082;383 8312 36821;36822;36823;36824;36825;36826 24321;24322;24323;24324 24324 4 VAQENSSTFGLQTLQK TNDTNLEKVAQENSST FGLQTLQKMDPNVSDS K V A Q K M 1 0 1 0 0 3 1 1 0 0 2 1 0 1 0 2 2 0 0 1 0 16 0 1749.8897 Q15652-2;Q15652-3;Q15652 Q15652-2 302 317 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes no 2 4.1419E-49 118.31 By matching By matching By MS/MS By MS/MS By MS/MS By matching 2 1 1 9890500 0 0 0 8300400 1590100 0 8201 1144 8313 36827;36828;36829;36830 24325;24326;24327;24328 24327 4 VAQGVSGAVQDKGSIHK FSEADKIKVAQGVSGA QDKGSIHKFVPYLIAG K V A H K F 2 0 0 1 0 2 0 3 1 1 0 2 0 0 0 2 0 0 0 3 0 17 1 1679.8955 H0Y4R1;P12268 H0Y4R1 395 411 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 yes no 3 0.0117 63.681 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1168400 526900 0 0 641490 0 0 8202 610 8314 36831;36832;36833 24329;24330;24331 24331 3 VAQPKEVYRQQQQQQK GSGKCEIKVAQPKEVY RQQQQQQKGGRGAAAG K V A Q K G 1 1 0 0 0 7 1 0 0 0 0 2 0 0 1 0 0 0 1 2 0 16 2 1985.0443 O14979-3;O14979-2;O14979 O14979-3 188 203 HNRPDL Heterogeneous nuclear ribonucleoprotein D-like yes no 3 0.0067219 60.364 By matching By MS/MS By matching By matching By matching By matching 1 1 2099200 0 1864100 0 0 235100 0 8203 699 8315 36834;36835 24332 24332 1 VAQRSPVDSGTILREPTTK GSRSQKVKVAQRSPVD ILREPTTKSVPVNNLP K V A T K S 1 2 0 1 0 1 1 1 0 1 1 1 0 0 2 2 3 0 0 2 0 19 2 2054.112 P49454 P49454 3146 3164 CENPF Centromere protein F yes yes 4 0.0015151 52.93 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 8978000 0 1609100 2658100 647360 0 4063500 8204 936 8316 36836;36837;36838;36839 24333;24334 24333 2 VAQRVLATQPGPGR PLNFLDPKVAQRVLAT ATQPGPGRGRKKDHGF K V A G R G 2 2 0 0 0 2 0 2 0 0 1 0 0 0 2 0 1 0 0 2 0 14 1 1448.8212 Q5JTH9-2;E9PCK7;Q5JTH9;F5H456 Q5JTH9-2 1025 1038 RRP12 RRP12-like protein yes no 3 0.0011276 75.89 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 9787400 1253600 782590 853270 775340 3462400 2660300 8205 414 8317 36840;36841;36842;36843;36844;36845 24335;24336;24337 24336 3 VAQYVVR NEYLSSFKVAQYVVRE KVAQYVVREEEMGEEE K V A V R E 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 3 0 7 0 833.47594 F5H2G1;F5GWX5;Q14839;Q14839-2;Q12873;E9PG89;Q12873-2 F5H2G1 1256 1262 CHD4;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 3 no no 2 0.011177 105.27 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 25409000 436130 8787400 4758700 0 855910 10571000 8206 486;430 8318 36846;36847;36848;36849;36850 24338;24339;24340 24340 3 VAQYVVREEDK NEYLSSFKVAQYVVRE YVVREEDKIEEIEREI K V A D K I 1 1 0 1 0 1 2 0 0 0 0 1 0 0 0 0 0 0 1 3 0 11 1 1334.683 Q12873;E9PG89;Q12873-2 Q12873 1288 1298 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 2 1.8707E-12 115.92 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 8933300 0 3373600 1161200 0 745280 3653300 8207 430 8319 36851;36852;36853;36854 24341 24341 1 VAQYVVREEEMGEEEEVER NEYLSSFKVAQYVVRE GEEEEVEREIIKQEES K V A E R E 1 2 0 0 0 1 8 1 0 0 0 0 1 0 0 0 0 0 1 4 0 19 1 2309.0482 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1256 1274 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 3 0.00051506 65.105 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 7345400 0 2363300 0 0 0 4982100 8208 486 8320 36855;36856 24342;24343;24344;24345 24343 4 VARKAGHHQTAYNALLNAGESR ECWLQSARVARKAGHH LLNAGESRLAELYVER R V A S R L 5 2 2 0 0 1 1 2 2 0 2 1 0 0 0 1 1 0 1 1 0 22 2 2363.2207 Q13535-2;Q13535-3;Q13535 Q13535-2 1866 1887 ATR Serine/threonine-protein kinase ATR yes no 4 0.036696 31.138 By MS/MS By matching By matching By matching By matching By matching 1 27813000 27813000 0 0 0 0 0 8209 1085 8321 36857 24346 24346 1 VARPLPAEEPERAK RRVTSRERVARPLPAE AEEPERAKSGTRTEKE R V A A K S 3 2 0 0 0 0 3 0 0 0 1 1 0 0 3 0 0 0 0 1 0 14 2 1561.8576 F5GX68 F5GX68 213 226 DNMT1 Cytosine-specific methyltransferase no no 3 0.0036088 71.031 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 23249000 2251000 6948500 0 0 220200 13829000 8210 487 8322 36858;36859;36860;36861 24347;24348 24347 2 VARVEQTETPEMMEAR SLVQKGYKVARVEQTE TPEMMEARCRKMAHIS K V A A R C 2 2 0 0 0 1 4 0 0 0 0 0 2 0 1 0 2 0 0 2 0 16 1 1875.8819 P52701;B4DF41;F5H2F9;F5H769;P52701-2 P52701 480 495 MSH6 DNA mismatch repair protein Msh6 yes no 3 0.0012956 79.347 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 2 1 1 1 1 1 27775000 8280400 2861900 4522900 1496300 3081700 7531600 8211 959 8323 36862;36863;36864;36865;36866;36867;36868 24349;24350;24351;24352;24353;24354;24355 24354 7 VASIETGLAAAAAK RPVREGTRVASIETGL GLAAAAAKLSQQEEQK R V A A K L 6 0 0 0 0 0 1 1 0 1 1 1 0 0 0 1 1 0 0 1 0 14 0 1271.7085 E7ET14;H0Y589;Q9UPP1-4;H3BLZ7;H0Y3N9;Q9UPP1-3;Q9UPP1-2;Q9UPP1;O75151 E7ET14 158 171 PHF2;PHF8 Histone lysine demethylase PHF8;Lysine-specific demethylase PHF2 yes no 2 0.004569 57.425 By matching By matching By matching By matching By matching By MS/MS 1 2874000 0 0 0 0 0 2874000 8212 377 8324 36869 24356 24356 1 VASIQGRPQDTKPGVK PAVPQTPRVASIQGRP QDTKPGVKRTVTHRTN R V A V K R 1 1 0 1 0 2 0 2 0 1 0 2 0 0 2 1 1 0 0 2 0 16 2 1679.9319 H0Y3K4;Q96EV2 H0Y3K4 721 736 RBM33 RNA-binding protein 33 yes no 4 0.015008 44.691 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 9543600 917090 1797400 1556400 877500 1141000 3254300 8213 607 8325 36870;36871;36872;36873;36874;36875 24357;24358 24357 1 VASLRETYGDMADCCEK LFGDELCKVASLRETY DMADCCEKQEPERNEC K V A E K Q 2 1 0 2 2 0 2 1 0 0 1 1 1 0 0 1 1 0 1 1 0 17 1 2003.8387 CON__P02769 CON__P02769 101 117 yes yes 2;3 1.7332E-07 89.502 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 5 5 5 4 5 738870000 90109000 173250000 122000000 98268000 40562000 214680000 + 8214 294 8326;8327 36876;36877;36878;36879;36880;36881;36882;36883;36884;36885;36886;36887;36888;36889;36890;36891;36892;36893;36894;36895;36896;36897;36898;36899;36900;36901;36902 24359;24360;24361;24362;24363;24364;24365;24366;24367;24368;24369;24370;24371;24372;24373 24371 25 15 VASSPVMVSNPATR TTLPATVKVASSPVMV MVSNPATRMLKTAAAQ K V A T R M 2 1 1 0 0 0 0 0 0 0 0 0 1 0 2 3 1 0 0 3 0 14 0 1414.7238 A6NEM2;P51610-2;P51610 A6NEM2 595 608 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 yes no 2 8.5506E-13 103.83 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 2 1 64105000 5083500 9531200 7515800 8629500 12464000 20881000 8215 18 8328 36903;36904;36905;36906;36907;36908;36909;36910 24374;24375;24376;24377;24378;24379 24376 6 VASVAENKGLFEEAAK DTKPIINKVASVAENK GLFEEAAKLYDLAKNA K V A A K L 4 0 1 0 0 0 3 1 0 0 1 2 0 1 0 1 0 0 0 2 0 16 1 1661.8625 H3BVE2;Q8N1F7-2;Q8N1F7;H3BVG0 H3BVE2 10 25 NUP93 Nuclear pore complex protein Nup93 yes no 3 0.0009023 73.834 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 9853700 851490 1193700 1760000 593550 2036900 3418100 8216 651 8329 36911;36912;36913;36914;36915;36916 24380;24381;24382;24383 24382 3 VASVDSAVAATTPTSMATVQKQK KLKKKAKKVASVDSAV MATVQKQKSGELNGDQ K V A Q K S 5 0 0 1 0 2 0 0 0 0 0 2 1 0 1 3 4 0 0 4 0 23 1 2290.1839 E7ENF1;G5EA44;Q96C57;F5H7W8;F5H8B7;H0YGK4;F6TFQ5;F5H3K2 E7ENF1 170 192 C12orf43 Uncharacterized protein C12orf43 yes no 3 5.8537E-22 94.911 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 8443000 6191000 980360 0 0 0 1271700 8217 350 8330 36917;36918;36919 24384;24385;24386 24386 3 VASVSQNAIVSAAGNIAR QDGQGMSRVASVSQNA SAAGNIARTIDRSVFK R V A A R T 5 1 2 0 0 1 0 1 0 2 0 0 0 0 0 3 0 0 0 3 0 18 0 1726.9326 E9PF10;O75694-2;B4DLT2;O75694 E9PF10 315 332 NUP155 Nuclear pore complex protein Nup155 yes no 2 3.2614E-210 164.53 By matching By MS/MS By matching By matching By matching By matching 1 71586000 0 71586000 0 0 0 0 8218 100 8331 36920 24387;24388 24388 2 VATVSLPR SPATLNSRVATVSLPR VATVSLPRSCAAAGTE R V A P R S 1 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 0 2 0 8 0 841.50215 CON__P00761 CON__P00761 108 115 yes yes 2 1.9704E-36 141.52 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 11008000000 2197600000 1330100000 1268500000 1793700000 2177700000 2240600000 + 8219 284 8332 36921;36922;36923;36924;36925;36926;36927 24389;24390;24391;24392;24393;24394;24395;24396;24397;24398;24399;24400;24401;24402 24392 14 VATVSLPRSCAAAGTECLISGWGNTK SPATLNSRVATVSLPR ISGWGNTKSSGSSYPS R V A T K S 4 1 1 0 2 0 1 3 0 1 2 1 0 0 1 3 3 1 0 2 0 26 1 2705.3265 CON__P00761 CON__P00761 108 133 yes yes 3 4.8693E-05 61.091 By matching By matching By matching By matching By MS/MS By matching 1 18368000 0 0 0 0 18368000 0 + 8220 284 8333 36928 24403 24403 0 VAVEAKNPADLPK FSVSPVVRVAVEAKNP KNPADLPKLVEGLKRL R V A P K L 3 0 1 1 0 0 1 0 0 0 1 2 0 0 2 0 0 0 0 2 0 13 1 1350.7507 P13639;F5H370 P13639 507 519 EEF2 Elongation factor 2 yes no 3 0.0014499 79.283 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2510800 0 0 0 0 1073300 1437500 8221 833 8334 36929;36930 24404;24405;24406 24404 3 VAVEEVDEEGK QHARTSGRVAVEEVDE EEVDEEGKFVRLRNKS R V A G K F 1 0 0 1 0 0 4 1 0 0 0 1 0 0 0 0 0 0 0 3 0 11 0 1202.5667 P02545;P02545-3;Q6UYC3;P02545-2;D6RAQ3;E7EUI9;Q5TCI8 P02545 440 450 LMNA Prelamin-A/C;Lamin-A/C yes no 2 4.3319E-05 101.3 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 7985000 762220 2377400 1115000 625130 950590 2154700 8222 783 8335 36931;36932;36933;36934;36935;36936 24407;24408;24409;24410 24407 4 VAVEYLDPSPEVQK VLSSIEGRVAVEYLDP DPSPEVQKKKYAFKCH R V A Q K K 1 0 0 1 0 1 2 0 0 0 1 1 0 0 2 1 0 0 1 3 0 14 0 1572.8035 O43684-2;O43684;B4DDM6 O43684-2 203 216 BUB3 Mitotic checkpoint protein BUB3 yes no 2 2.2731E-228 172.85 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 261820000 29854000 98690000 25603000 15057000 6216500 86397000 8223 719 8336 36937;36938;36939;36940;36941;36942 24411;24412;24413;24414;24415;24416;24417;24418 24413 8 VAVEYLDPSPEVQKK VLSSIEGRVAVEYLDP PSPEVQKKKYAFKCHR R V A K K K 1 0 0 1 0 1 2 0 0 0 1 2 0 0 2 1 0 0 1 3 0 15 1 1700.8985 O43684-2;O43684;B4DDM6 O43684-2 203 217 BUB3 Mitotic checkpoint protein BUB3 yes no 2;3 7.4462E-125 149.69 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 2 2 2 2 106190000 17478000 10244000 26590000 12630000 3029600 36218000 8224 719 8337 36943;36944;36945;36946;36947;36948;36949;36950;36951;36952;36953 24419;24420;24421;24422;24423;24424;24425;24426 24420 7 VAVLGNVDSGK NQQFLDLRVAVLGNVD LGNVDSGKSTLLGVLT R V A G K S 1 0 1 1 0 0 0 2 0 0 1 1 0 0 0 1 0 0 0 3 0 11 0 1057.5768 H0Y7A5;Q9BX10-2;Q9BX10-4;Q9BX10 H0Y7A5 141 151 GTPBP2 GTP-binding protein 2 yes no 2 0.030492 51.286 By matching By matching By matching By matching By matching By MS/MS 1 1 2219600 0 0 0 0 908790 1310800 8225 613 8338 36954;36955 24427 24427 1 VAVTSSSSSSSSSSSIPSAEKVPTTK PQEPGPAKVAVTSSSS AEKVPTTKSTLWQEEM K V A T K S 2 0 0 0 0 0 1 0 0 1 0 2 0 0 2 12 3 0 0 3 0 26 1 2497.2395 Q6WCQ1-3;Q6WCQ1;Q6WCQ1-2 Q6WCQ1-3 175 200 MPRIP Myosin phosphatase Rho-interacting protein yes no 3 0.00010149 53.444 By matching By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 5225400 0 1701200 2330800 1193400 0 0 8226 1238 8339 36956;36957;36958 24428;24429;24430 24428 3 VAVVNPQPQQWSK FSGNTSPKVAVVNPQP PQPQQWSKMSVKKAPP K V A S K M 1 0 1 0 0 3 0 0 0 0 0 1 0 0 2 1 0 1 0 3 0 13 0 1479.7834 Q70E73;C9K0J5 Q70E73 1101 1113 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 yes no 2 0.0012021 77.894 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 7197300 0 0 1478800 1278700 1827700 2612100 8227 278 8340 36959;36960;36961;36962 24431 24431 1 VAYAAQPALK TTPGAQQKVAYAAQPA YAAQPALKTQFLTTPI K V A L K T 4 0 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 0 1 1 0 10 0 1030.5811 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91 Q96L91-4 2892 2901 EP400 E1A-binding protein p400 yes no 2 0.016111 66.962 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 8583900 461100 1513400 1159500 1131900 1904400 2413500 8228 1405 8341 36963;36964;36965;36966;36967;36968 24432;24433 24433 2 VCADLIR RNVKSLEKVCADLIRG KVCADLIRGAKEKNLK K V C I R G 1 1 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 7 0 845.44292 P60866;P60866-2;E5RJX2 P60866 35 41 RPS20 40S ribosomal protein S20 yes no 2 0.010539 105.2 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 34337000 6034600 2239000 1792000 3614600 13070000 7587000 8229 979 8342 36969;36970;36971;36972;36973;36974 24434;24435;24436 24434 3 VCADLIRGAKEK RNVKSLEKVCADLIRG LIRGAKEKNLKVKGPV K V C E K N 2 1 0 1 1 0 1 1 0 1 1 2 0 0 0 0 0 0 0 1 0 12 2 1358.734 P60866;P60866-2;E5RJX2 P60866 35 46 RPS20 40S ribosomal protein S20 yes no 2;3 0.010224 80.318 By MS/MS By matching By MS/MS By matching By matching By MS/MS 2 2 2 1 1 58812000 26544000 9573000 9021000 0 6371100 7302500 8230 979 8343 36975;36976;36977;36978;36979;36980;36981;36982 24437;24438;24439;24440 24440 4 VCCALLISESQK LFTNTQCKVCCALLIS LLISESQKLAHYQSSR K V C Q K L 1 0 0 0 2 1 1 0 0 1 2 1 0 0 0 2 0 0 0 1 0 12 0 1406.6898 B7Z367;Q9UL40;D6RJ07;Q9UL40-2;B7Z6B6;B7Z6Q2 B7Z367 77 88 ZNF346 Zinc finger protein 346 yes no 2 1.8673E-26 120.03 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1 79406000 19295000 5927400 26551000 9268900 8110600 10254000 8231 184 8344 36983;36984;36985;36986;36987;36988;36989 24441;24442;24443;24444;24445;24446 24442 6 VCEVCSAYLGLHDNDRR SFQQQKLRVCEVCSAY GLHDNDRRLADHFGGK R V C R R L 1 2 1 2 2 0 1 1 1 0 2 0 0 0 0 1 0 0 1 2 0 17 1 2062.9313 B7Z500;Q9Y383-2;Q9Y383;B7Z4Q3 B7Z500 186 202 LUC7L2;C7orf55 Putative RNA-binding protein Luc7-like 2;UPF0562 protein C7orf55 no no 4 0.0033539 46.318 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3239000 766470 717610 0 0 0 1754900 8232 186 8345 36990;36991;36992 24447 24447 1 VCGKPLPCGSLDFIHTCEK DPVPSCGKVCGKPLPC DFIHTCEKLCHEGDCG K V C E K L 0 0 0 1 3 0 1 2 1 1 2 2 0 1 2 1 1 0 0 1 0 19 1 2217.0381 Q12986;Q12986-2;F5GXD0;Q12986-3 Q12986 625 643 NFX1 Transcriptional repressor NF-X1 yes no 4 0.021572 46.925 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 23991000 0 13516000 9037700 0 1437000 0 8233 1066 8346 36993;36994;36995 24448;24449 24448 1 VCIELTGLHPK YSELTNLKVCIELTGL ELTGLHPKKQRHLLHL K V C P K K 0 0 0 0 1 0 1 1 1 1 2 1 0 0 1 0 1 0 0 1 0 11 0 1265.6802 Q6W2J9 Q6W2J9 1196 1206 BCOR BCL-6 corepressor yes yes 3 0.037654 80.706 By matching By matching By matching By matching By matching By MS/MS 1 1767400 0 0 0 0 0 1767400 8234 1237 8347 36996 24450 24450 0 VCLLDVQPHTVK RSVLAKNKVCLLDVQP DVQPHTVKHLRTLEFK K V C V K H 0 0 0 1 1 1 0 0 1 0 2 1 0 0 1 0 1 0 0 3 0 12 0 1407.7544 Q5T2T1 Q5T2T1 461 472 MPP7 MAGUK p55 subfamily member 7 yes yes 3 0.024649 47.712 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 3704700 0 939460 0 1086700 0 1678500 8235 1190 8348 36997;36998;36999 24451;24452 24451 2 VCNRNEYLDGR HLPVIENKVCNRNEYL RNEYLDGRVKPTELCA K V C G R V 0 2 2 1 1 0 1 1 0 0 1 0 0 0 0 0 0 0 1 1 0 11 1 1394.6361 CON__P06868 CON__P06868 730 740 yes yes 3 0.0054544 72.531 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 12420000 1026000 2699600 1401500 1199600 1665900 4427300 + 8236 295 8349 37000;37001;37002;37003;37004;37005 24453;24454;24455 24454 3 VCVEFDGESWRK DVTKKDLKVCVEFDGE FDGESWRKRRWIEVYS K V C R K R 0 1 0 1 1 0 2 1 0 0 0 1 0 1 0 1 0 1 0 2 0 12 1 1510.6875 Q9Y4C1;F5H4E6;F8WE62;C9JC73;C9J7Q7 Q9Y4C1 63 74 KDM3A Lysine-specific demethylase 3A yes no 3 0.0013435 73.951 By matching By matching By matching By matching By matching By MS/MS 1 1241500 0 0 0 0 0 1241500 8237 516 8350 37006 24456 24456 1 VCYYYDGDIGNYYYGQGHPMKPHRIR SQGGGKKKVCYYYDGD PMKPHRIRMTHNLLLN K V C I R M 0 2 1 2 1 1 0 4 2 2 0 1 1 0 2 0 0 0 6 1 0 26 2 3221.46 Q92769;H3BM24 Q92769 12 37 HDAC2 Histone deacetylase 2 yes no 5 0.0010297 44.848 By matching By matching By matching By matching By matching By MS/MS 1 7599100 0 0 0 0 0 7599100 8238 1358 8351 37007 24457 24457 152 1 VCYYYDGDVGNYYYGQGHPMKPHR QTQGTRRKVCYYYDGD GHPMKPHRIRMTHNLL K V C H R I 0 1 1 2 1 1 0 4 2 0 0 1 1 0 2 0 0 0 6 2 0 24 1 2938.2592 Q13547;Q5TEE2 Q13547 11 34 HDAC1 Histone deacetylase 1 yes no 4 6.0098E-21 89.557 By matching By matching By matching By matching By matching By MS/MS 1 27610000 0 0 0 0 0 27610000 8239 1086 8352 37008 24458 24458 1 VDCPGPGSGAEGSGPGSVVPGSSGVGTPRQFTR IGPRKKRKVDCPGPGS GTPRQFTRQRITRVNL K V D T R Q 1 2 0 1 1 1 1 9 0 0 0 0 0 1 5 5 2 0 0 4 0 33 1 3112.4632 Q5TBP5;O00268 Q5TBP5 884 916 TAF4 Transcription initiation factor TFIID subunit 4 yes no 3 0.015926 23.951 By MS/MS By matching By matching By matching By matching By matching 1 4133700 4133700 0 0 0 0 0 8240 688 8353 37009 24459 24459 1 VDCPVCGVNIPESHINK STLKQVTKVDCPVCGV IPESHINKHLDSCLSR K V D N K H 0 0 2 1 2 0 1 1 1 2 0 1 0 0 2 1 0 0 0 3 0 17 0 1936.9135 Q9NS91;F8WE49 Q9NS91 202 218 RAD18 E3 ubiquitin-protein ligase RAD18 yes no 3 0.027685 37.042 By matching By matching By matching By matching By matching By MS/MS 1 1 2027100 0 652910 0 0 0 1374200 8241 1542 8354 37010;37011 24460 24460 1 VDCQAYAQTCQK KGKVKAGKVDCQAYAQ AYAQTCQKAGIRAYPT K V D Q K A 2 0 0 1 2 3 0 0 0 0 0 1 0 0 0 0 1 0 1 1 0 12 0 1470.6231 Q8IXB1;Q8IXB1-2;F8W884 Q8IXB1 726 737 DNAJC10 DnaJ homolog subfamily C member 10 yes no 2;3 4.1056E-18 113.95 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 3 2 2 1 113770000 3805800 4541400 25566000 18603000 24535000 36723000 8242 1287 8355 37012;37013;37014;37015;37016;37017;37018;37019;37020;37021 24461;24462;24463;24464;24465;24466;24467;24468;24469;24470;24471;24472;24473 24472 13 VDEGAGDSAAVASGGAQTLALAGSPAPSGHPK DKVRKRRKVDEGAGDS PAPSGHPKAGHSENGV K V D P K A 8 0 0 2 0 1 1 6 1 0 2 1 0 0 3 4 1 0 0 2 0 32 0 2845.3842 E7ESW4;Q9NZT2-2;Q9NZT2 E7ESW4 316 347 OGFR Opioid growth factor receptor yes no 3 0.014574 25.214 By matching By matching By matching By matching By matching By MS/MS 1 3586900 0 0 0 0 0 3586900 8243 376 8356 37022 24474 24474 1 VDFIEEK IFQHSKYKVDFIEEKA KVDFIEEKASQNPERI K V D E K A 0 0 0 1 0 0 2 0 0 1 0 1 0 1 0 0 0 0 0 1 0 7 0 878.43855 C9JG87;Q9NYK5;Q9NYK5-2 C9JG87 227 233 MRPL39 39S ribosomal protein L39, mitochondrial yes no 2 0.025922 86.833 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1975300 0 0 570070 0 363590 1041700 8244 245 8357 37023;37024;37025 24475 24475 1 VDFMETENSSSVK TVLNGNLKVDFMETEN TENSSSVKKQKALVAK K V D V K K 0 0 1 1 0 0 2 0 0 0 0 1 1 1 0 3 1 0 0 2 0 13 0 1471.6501 P54132;F5H7R6;F5H3V6 P54132 1187 1199 BLM Bloom syndrome protein yes no 2 0.0016884 86.699 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2377200 219070 505260 0 0 0 1652900 8245 965 8358 37026;37027;37028 24476 24476 1 VDFTEEEINNMK QIQDLYGKVDFTEEEI EEEINNMKTELEKYGI K V D M K T 0 0 2 1 0 0 3 0 0 1 0 1 1 1 0 0 1 0 0 1 0 12 0 1467.6552 P46940;H0YKA5 P46940 175 186 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 2 0 227.81 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 73988000 0 15625000 14161000 6727300 2691900 34784000 8246 929 8359 37029;37030;37031;37032;37033 24477;24478;24479;24480 24480 4 VDHHVFISNRNK CVGLQFGKVDHHVFIS VFISNRNKAILQLDSP K V D N K A 0 1 2 1 0 0 0 0 2 1 0 1 0 1 0 1 0 0 0 2 0 12 1 1464.7586 Q14966-3;Q14966;Q14966-4;Q14966-5 Q14966-3 1034 1045 ZNF638 Zinc finger protein 638 yes no 3 0.026188 49.448 By matching By matching By MS/MS By matching By matching By matching 1 1 1 743040 0 113320 363870 0 0 265850 8247 1118 8360 37034;37035;37036 24481;24482 24481 2 VDKLNAAHYSTGK MKAPEKKKVDKLNAAH AAHYSTGKVSASFTST K V D G K V 2 0 1 1 0 0 0 1 1 0 1 2 0 0 0 1 1 0 1 1 0 13 1 1402.7205 Q13356;Q13356-2;E7EW80 Q13356 233 245 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2 yes no 3 0.0096279 56.139 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 5999900 828370 733520 2736300 1115400 586310 0 8248 1079 8361 37037;37038;37039;37040;37041 24483;24484;24485 24483 3 VDKNEAFSSEDSLGENK RVSSKEHKVDKNEAFS EDSLGENKTISPKSTV K V D N K T 1 0 2 2 0 0 3 1 0 0 1 2 0 1 0 3 0 0 0 1 0 17 1 1867.8436 Q56NI9;H0YB88 Q56NI9 301 317 ESCO2 N-acetyltransferase ESCO2 yes no 3 0.00086764 81.854 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 8985600 0 2402500 1688500 0 1812500 3082200 8249 1176 8362 37042;37043;37044;37045 24486;24487 24486 2 VDKNEAFSSEDSLGENKTISPK RVSSKEHKVDKNEAFS ENKTISPKSTVYPIFS K V D P K S 1 0 2 2 0 0 3 1 0 1 1 3 0 1 1 4 1 0 0 1 0 22 2 2394.1551 Q56NI9;H0YB88 Q56NI9 301 322 ESCO2 N-acetyltransferase ESCO2 yes no 3;4 0.00053155 54.857 By MS/MS By matching By MS/MS By matching By matching By matching 2 2 1 16189000 5367600 0 8227700 0 2594100 0 8250 1176 8363 37046;37047;37048;37049;37050 24488;24489;24490;24491 24490 3 VDKQTALLDADDPVSQLHK LPRLIIRKVDKQTALL DPVSQLHKCAFYLKDT K V D H K C 2 0 0 4 0 2 0 0 1 0 3 2 0 0 1 1 1 0 0 2 0 19 1 2092.08 Q06330;D6R927;Q06330-5;Q06330-4;Q06330-6;Q06330-7;Q06330-3;Q06330-2;H0Y8R3 Q06330 267 285 RBPJ Recombining binding protein suppressor of hairless yes no 3;4 3.3283E-229 164.5 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 2 144780000 37103000 21739000 14321000 28241000 3470500 39904000 8251 1042 8364 37051;37052;37053;37054;37055;37056;37057;37058;37059 24492;24493;24494;24495;24496;24497;24498;24499;24500;24501;24502 24495 11 VDLAVTRDEAAK KLDGRQLKVDLAVTRD VTRDEAAKLQTTKVKK K V D A K L 3 1 0 2 0 0 1 0 0 0 1 1 0 0 0 0 1 0 0 2 0 12 1 1286.683 E9PDD9;Q9NW13 E9PDD9 273 284 RBM28 RNA-binding protein 28 yes no 2 0.0051201 88.163 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 3600700 713590 724870 401540 0 1013000 747680 8252 422 8365 37060;37061;37062;37063;37064 24503;24504;24505 24503 3 VDLETVPK LSIEALPKVDLETVPK VDLETVPKVSIVASPE K V D P K V 0 0 0 1 0 0 1 0 0 0 1 1 0 0 1 0 1 0 0 2 0 8 0 899.4964 Q8IWC1-2;Q8IWC1;H7BY77;Q8IWC1-3 Q8IWC1-2 331 338 MAP7D3 MAP7 domain-containing protein 3 yes no 2 0.011726 91.069 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 6924800 294280 2082900 857700 316070 966930 2406900 8253 1280 8366 37065;37066;37067;37068;37069;37070 24506;24507 24506 2 VDLGLPEKK ________________ DLGLPEKKKKKKVVKE K V D K K K 0 0 0 1 0 0 1 1 0 0 2 2 0 0 1 0 0 0 0 1 0 9 1 997.5808 Q1ED39;H3BMC9 Q1ED39 8 16 KNOP1 Lysine-rich nucleolar protein 1 yes no 2 0.034775 96.665 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 8600600 1189200 1393900 872200 1066200 1888700 2190400 8254 1157 8367 37071;37072;37073;37074;37075;37076 24508 24508 1 VDLSTSTDWK APLAMAAKVDLSTSTD LSTSTDWKEAKSFLKG K V D W K E 0 0 0 2 0 0 0 0 0 0 1 1 0 0 0 2 2 1 0 1 0 10 0 1150.5506 Q9BQ69 Q9BQ69 87 96 MACROD1 O-acetyl-ADP-ribose deacetylase MACROD1 yes yes 2 0.010621 72.848 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 12007000 1707300 3291100 1744600 1138800 0 4124700 8255 1439 8368 37077;37078;37079;37080;37081 24509;24510;24511;24512 24511 4 VDLSTSTDWKEAK APLAMAAKVDLSTSTD STDWKEAKSFLKGLSD K V D A K S 1 0 0 2 0 0 1 0 0 0 1 2 0 0 0 2 2 1 0 1 0 13 1 1478.7253 Q9BQ69 Q9BQ69 87 99 MACROD1 O-acetyl-ADP-ribose deacetylase MACROD1 yes yes 2;3 1.5479E-241 184.11 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 2 2 1 2 44580000 8844500 13766000 4927700 2938900 5406900 8696000 8256 1439 8369 37082;37083;37084;37085;37086;37087;37088;37089;37090;37091;37092 24513;24514;24515;24516;24517;24518;24519 24515 7 VDMKEEPLAVSK RLKIPLVKVDMKEEPL EEPLAVSKLTRTSGET K V D S K L 1 0 0 1 0 0 2 0 0 0 1 2 1 0 1 1 0 0 0 2 0 12 1 1344.6959 P46013;F5H4V4;P46013-2 P46013 2489 2500 MKI67 Antigen KI-67 no no 2;3 7.2542E-31 122.46 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 2 1 8869600 0 701240 4223900 1920600 1269100 754710 8257 919;920 8370 37093;37094;37095;37096;37097;37098;37099;37100;37101 24520;24521;24522;24523;24524 24524 5 VDNDENEHQLSLR ADKDYHFKVDNDENEH NEHQLSLRTVSLGAGA K V D L R T 0 1 2 2 0 1 2 0 1 0 2 0 0 0 0 1 0 0 0 1 0 13 0 1567.7227 P06748-2;P06748;P06748-3;E5RGW4 P06748-2 33 45 NPM1 Nucleophosmin yes no 2;3 7.2002E-36 124.81 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 193750000 7051700 42847000 11067000 4663700 69181000 58938000 8258 801 8371 37102;37103;37104;37105;37106;37107;37108;37109;37110;37111;37112;37113 24525;24526;24527;24528;24529;24530;24531;24532 24528 8 VDNDENEHQLSLRTVSLGAGAK ADKDYHFKVDNDENEH VSLGAGAKDELHIVEA K V D A K D 2 1 2 2 0 1 2 2 1 0 3 1 0 0 0 2 1 0 0 2 0 22 1 2352.167 P06748-2;P06748;P06748-3;E5RGW4 P06748-2 33 54 NPM1 Nucleophosmin yes no 3;4 2.6275E-113 136.81 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 3 1 283270000 152550000 455510 40560000 13795000 60244000 15667000 8259 801 8372 37114;37115;37116;37117;37118;37119;37120;37121;37122;37123;37124 24533;24534;24535;24536;24537;24538;24539 24538 7 VDNEILDYK TEEKLRAKVDNEILDY DNEILDYKDLAAIPKV K V D Y K D 0 0 1 2 0 0 1 0 0 1 1 1 0 0 0 0 0 0 1 1 0 9 0 1107.5448 O14639-4;O14639-3;O14639-5;Q5JVV3;H0Y3K7;F8WAB1;Q5T6N2;F8WAB0;O14639-2;F8W8M4;A6NKJ2;O14639;Q5T6N4;A6NCD9;H0Y7N6;F6XFR5 O14639-4 34 42 ABLIM1 Actin-binding LIM protein 1 yes no 2 0.02747 65.719 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 9081000 0 245190 2246100 1190000 1125700 4274000 8260 13 8373 37125;37126;37127;37128;37129 24540;24541;24542 24542 3 VDPEIQNVK LLQPLNVKVDPEIQNV DPEIQNVKAQEREQIK K V D V K A 0 0 1 1 0 1 1 0 0 1 0 1 0 0 1 0 0 0 0 2 0 9 0 1040.5502 P35908;CON__P35908;CON__Q3TTY5 P35908 167 175 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 2.9821E-19 126.24 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 38265000 0 15830000 0 0 0 22435000 + 8261 302 8374 37130;37131 24543;24544 24544 2 VDPEIQNVKAQER LLQPLNVKVDPEIQNV QNVKAQEREQIKTLNN K V D E R E 1 1 1 1 0 2 2 0 0 1 0 1 0 0 1 0 0 0 0 2 0 13 1 1524.7896 P35908;CON__P35908 P35908 167 179 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2;3 0.0013983 78.964 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 2 2 2 2 1 2 53030000 1776800 14452000 19752000 4815700 3008700 9224500 + 8262 302 8375 37132;37133;37134;37135;37136;37137;37138;37139;37140;37141;37142 24545;24546;24547;24548;24549 24549 5 VDPEIQNVKAQEREQIK LLQPLNVKVDPEIQNV AQEREQIKTLNNKFAS K V D I K T 1 1 1 1 0 3 3 0 0 2 0 2 0 0 1 0 0 0 0 2 0 17 2 2023.0698 P35908;CON__P35908 P35908 167 183 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3;4 0.0092919 46.41 By matching By matching By MS/MS By MS/MS By matching By matching 1 2 2 2 2 13430000 0 1094400 4263600 3409000 1708900 2953900 + 8263 302 8376 37143;37144;37145;37146;37147;37148;37149;37150;37151 24550;24551;24552 24552 3 VDPTYGLESSCIAGTGPDEPEK EAARASGKVDPTYGLE TGPDEPEKLEGAEEEK K V D E K L 1 0 0 2 1 0 3 3 0 1 1 1 0 0 3 2 2 0 1 1 0 22 0 2321.0369 Q92922 Q92922 751 772 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 2 2.9484E-33 102.15 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 18078000 0 10072000 0 8006600 0 0 8264 1365 8377 37152;37153 24553;24554 24554 1 VDPTYGLESSCIAGTGPDEPEKLEGAEEEK EAARASGKVDPTYGLE LEGAEEEKMEADPDGQ K V D E K M 2 0 0 2 1 0 7 4 0 1 2 2 0 0 3 2 2 0 1 1 0 30 1 3206.4449 Q92922 Q92922 751 780 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 3 1.7215E-30 84.674 By matching By matching By matching By MS/MS By matching By matching 1 11473000 0 0 0 11473000 0 0 8265 1365 8378 37154 24555 24555 1 VDQETLTEMVKPSIDYVRHK MLMQPAAKVDQETLTE SIDYVRHKKFRSGNYP K V D H K K 0 1 0 2 0 1 2 0 1 1 1 2 1 0 1 1 2 0 1 3 0 20 2 2387.2155 Q9NS86 Q9NS86 280 299 LANCL2 LanC-like protein 2 yes yes 4 9.4359E-18 97.352 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 303830000 69441000 21572000 93236000 24352000 94733000 494720 8266 1541 8379 37155;37156;37157;37158;37159;37160 24556;24557;24558;24559;24560 24560 5 VDQIQEIVTGNPTVIK LQEEIKSKVDQIQEIV TGNPTVIKMVVSFNRG K V D I K M 0 0 1 1 0 2 1 1 0 3 0 1 0 0 1 0 2 0 0 3 0 16 0 1752.9622 P46940;H0YLE8 P46940 1038 1053 IQGAP1 Ras GTPase-activating-like protein IQGAP1 yes no 2 0.038485 45.342 By matching By MS/MS By matching By matching By matching By matching 1 34018000 0 34018000 0 0 0 0 8267 929 8380 37161 24561 24561 0 VDQLGSDDIHNALKQTPK YIANCTVKVDQLGSDD NALKQTPKVLVVQSFD K V D P K V 1 0 1 3 0 2 0 1 1 1 2 2 0 0 1 1 1 0 0 1 0 18 1 1978.012 Q14865-2;Q14865 Q14865-2 387 404 ARID5B AT-rich interactive domain-containing protein 5B yes no 3 0.013009 40.798 By matching By matching By matching By matching By matching By MS/MS 1 1 2613300 0 987450 0 0 0 1625900 8268 1117 8381 37162;37163 24562 24562 1 VDSEENTLNSQTNATSGMNPDGVLSK PDKGISCKVDSEENTL NPDGVLSKMENLPEIN K V D S K M 1 0 4 2 0 1 2 2 0 0 2 1 1 0 1 4 3 0 0 2 0 26 0 2707.2243 A8MTM6;Q15398;Q15398-1 A8MTM6 264 289 DLGAP5 Disks large-associated protein 5 yes no 2;3 1.1452E-12 66.925 By matching By MS/MS By matching By MS/MS By matching By matching 2 1 27599000 0 23418000 0 4181600 0 0 8269 42 8382 37164;37165;37166 24563;24564;24565 24564 3 VDSETNIEASKLPTSEPEADAEIEPK PQQLPECKVDSETNIE ADAEIEPKESNGTKLE K V D P K E 3 0 1 2 0 0 6 0 0 2 1 2 0 0 3 3 2 0 0 1 0 26 1 2798.3345 Q9BYW2;F2Z317;H7C3H4 Q9BYW2 1938 1963 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 3 3.3496E-21 86.08 By matching By MS/MS By matching By matching By matching By matching 1 4248100 0 4248100 0 0 0 0 8270 479 8383 37167 24566 24566 1 VDSQYPPVQR DFQAKREKVDSQYPPV SQYPPVQRLMTPKPVS K V D Q R L 0 1 0 1 0 2 0 0 0 0 0 0 0 0 2 1 0 0 1 2 0 10 0 1187.5935 P49790;F6QR24;Q4LE47 P49790 357 366 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 2 0.01091 72.096 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 8164000 335760 1393000 292600 195690 2813500 3133300 8271 531 8384 37168;37169;37170;37171;37172;37173 24567;24568 24568 2 VDVEEEFFALRK QSKRSLRKVDVEEEFF EEFFALRKRTPSAGKA K V D R K R 1 1 0 1 0 0 3 0 0 0 1 1 0 2 0 0 0 0 0 2 0 12 1 1480.7562 P46013;F5H4V4;P46013-2 P46013 1518 1529 MKI67 Antigen KI-67 no no 3 0.0012603 74.611 By MS/MS By matching By matching By matching By matching By matching 1 11144000 11144000 0 0 0 0 0 8272 919;920 8385 37174 24569 24569 1 VDVGKDQEFTVK KVSGLGEKVDVGKDQE KDQEFTVKSKGAGGQG K V D V K S 0 0 0 2 0 1 1 1 0 0 0 2 0 1 0 0 1 0 0 3 0 12 1 1363.6983 Q5HY54;P21333-2;P21333;A6NDY9 Q5HY54 983 994 FLNA Filamin-A yes no 3 0.006638 62.732 By matching By matching By matching By matching By matching By MS/MS 1 1249900 0 0 0 0 0 1249900 8273 860 8386 37175 24570 24570 1 VDVSCEPLEGVEK DVKEPSPRVDVSCEPL EPLEGVEKCSDSQSWE R V D E K C 0 0 0 1 1 0 3 1 0 0 1 1 0 0 1 1 0 0 0 3 0 13 0 1459.6865 Q12888;Q12888-2;A6NNK5;F8VY86;C9JXV0;H7C3N7 Q12888 768 780 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 2 0.0049411 61.409 By MS/MS By matching By matching By matching By matching By matching 1 1 1 4370300 1015200 1099800 0 0 0 2255400 8274 1063 8387 37176;37177;37178 24571 24571 1 VEAALNENTCR SPAPSTGKVEAALNEN ALNENTCRAERELRSI K V E C R A 2 1 2 0 1 0 2 0 0 0 1 0 0 0 0 0 1 0 0 1 0 11 0 1275.5877 Q9GZR1-2;Q9GZR1;E7EQN6;H0Y4F4;F8W6D9;F5GZW5 Q9GZR1-2 363 373 SENP6 Sentrin-specific protease 6 yes no 2 0.0040183 79.23 By matching By matching By matching By matching By matching By MS/MS 1 1 2289100 0 0 600410 0 0 1688600 8275 361 8388 37179;37180 24572 24572 1 VEAALNENTCRAER SPAPSTGKVEAALNEN ENTCRAERELRSIPED K V E E R E 3 2 2 0 1 0 3 0 0 0 1 0 0 0 0 0 1 0 0 1 0 14 1 1631.7686 Q9GZR1-2;Q9GZR1;E7EQN6;H0Y4F4;F8W6D9;F5GZW5 Q9GZR1-2 363 376 SENP6 Sentrin-specific protease 6 yes no 3 0.0015755 68.676 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 7445800 0 2448100 1815000 553980 581550 2047200 8276 361 8389 37181;37182;37183;37184;37185 24573;24574;24575 24574 3 VEADRPGK ________________ VEADRPGKLFIGGLNT M V E G K L 1 1 0 1 0 0 1 1 0 0 0 1 0 0 1 0 0 0 0 1 0 8 1 870.45593 Q96E39;O75526;H3BT71;P38159-2;P38159;H0Y6E7;H3BNC1;H3BR27;P38159-3 Q96E39 2 9 RBMXL1;RBMXL2;RBMX RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X-linked-like-2;RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed no no 2 0.036534 71.692 By matching By matching By MS/MS By matching By matching By matching 1 2301900 0 0 2301900 0 0 0 8277 1379;649 8390 37186 24576 24576 1 VEALPEQVAPESR NVGQTAEKVEALPEQV EQVAPESRNRIRVRQD K V E S R N 2 1 0 0 0 1 3 0 0 0 1 0 0 0 2 1 0 0 0 2 0 13 0 1423.7307 Q96RE7 Q96RE7 319 331 NACC1 Nucleus accumbens-associated protein 1 yes yes 2 0.0016824 86.756 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 26057000 0 7180500 6413100 1026400 0 11437000 8278 1417 8391 37187;37188;37189;37190 24577;24578;24579 24579 3 VEAPETNIDKTPK LAQRLGKKVEAPETNI TNIDKTPKKAQVSKSL K V E P K K 1 0 1 1 0 0 2 0 0 1 0 2 0 0 2 0 2 0 0 1 0 13 1 1440.746 B4DLG2;O75152;E9PQ61;E9PBY7 B4DLG2 257 269 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 3 0.030061 44.829 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1534400 567350 0 0 568010 0 399020 8279 97 8392 37191;37192;37193 24580 24580 1 VEAPEYIPISDDPK GSKKKPVKVEAPEYIP IPISDDPKASAKKKMK K V E P K A 1 0 0 2 0 0 2 0 0 2 0 1 0 0 3 1 0 0 1 1 0 14 0 1571.7719 Q1ED39;H3BPL4 Q1ED39 250 263 KNOP1 Lysine-rich nucleolar protein 1 yes no 2 0.0012925 79.875 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 19082000 10168000 0 5358600 0 3555800 0 8280 1157 8393 37194;37195;37196 24581;24582;24583 24581 3 VEDAADSATKPENLSSK TRNRTPAKVEDAADSA KPENLSSKTRGSIPTD K V E S K T 3 0 1 2 0 0 2 0 0 0 1 2 0 0 1 3 1 0 0 1 0 17 1 1760.8428 P46013;F5H4V4 P46013 405 421 MKI67 Antigen KI-67 yes no 2;3 6.4912E-45 117.18 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 2 2 2 2 139010000 10102000 30351000 24260000 9104100 22573000 42617000 8281 919 8394 37197;37198;37199;37200;37201;37202;37203;37204;37205;37206;37207;37208 24584;24585;24586;24587;24588;24589;24590 24584 7 VEDAADSATKPENLSSKTR TRNRTPAKVEDAADSA ENLSSKTRGSIPTDVE K V E T R G 3 1 1 2 0 0 2 0 0 0 1 2 0 0 1 3 2 0 0 1 0 19 2 2017.9916 P46013;F5H4V4 P46013 405 423 MKI67 Antigen KI-67 yes no 3;4 0.0011062 73.279 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 3 2 2 1 2 1 49028000 9868400 10377000 9584100 356950 10313000 8529100 8282 919 8395 37209;37210;37211;37212;37213;37214;37215;37216;37217;37218;37219 24591;24592;24593;24594;24595;24596;24597;24598;24599;24600 24596 10 VEDSTMPIRR HADKLGEKVEDSTMPI DSTMPIRRTVNSTRET K V E R R T 0 2 0 1 0 0 1 0 0 1 0 0 1 0 1 1 1 0 0 1 0 10 1 1202.6078 Q5SSJ5;B0QZK9;B0QZK8;Q5SSJ5-5 Q5SSJ5 34 43 HP1BP3 Heterochromatin protein 1-binding protein 3 yes no 3 0.0065528 70.028 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2291100 622940 0 0 0 1188100 480120 8283 1186 8396 37220;37221;37222 24601 24601 1 VEEAEPEEFVVEK KQNGKSKKVEEAEPEE PEEFVVEKVLDRRVVN K V E E K V 1 0 0 0 0 0 6 0 0 0 0 1 0 1 1 0 0 0 0 3 0 13 0 1532.7246 Q13185;C9JMM0;B8ZZ43 Q13185 22 34 CBX3 Chromobox protein homolog 3 yes no 2 0.001738 81.278 By matching By MS/MS By matching By matching By matching By matching 1 744060 0 744060 0 0 0 0 8284 1075 8397 37223 24602 24602 1 VEEAIQQYER KEQLNNQKVEEAIQQY EAIQQYERACKDLNVK K V E E R A 1 1 0 0 0 2 3 0 0 1 0 0 0 0 0 0 0 0 1 1 0 10 0 1263.6095 Q96Q89-5;Q96Q89-3;Q96Q89;C9J6W2;Q96Q89-2;Q96Q89-4 Q96Q89-5 45 54 KIF20B Kinesin-like protein KIF20B yes no 2 0.010869 72.2 By matching By matching By matching By MS/MS By matching By matching 1 1 539910 0 0 0 307830 232080 0 8285 232 8398 37224;37225 24603;24604 24603 2 VEEAQGMMK EELGSEGKVEEAQGMM EEAQGMMKLVEQLKEE K V E M K L 1 0 0 0 0 1 2 1 0 0 0 1 2 0 0 0 0 0 0 1 0 9 0 1021.4573 O95232;B4DJ96;F5H1W9 O95232 152 160 LUC7L3 Luc7-like protein 3 yes no 2 0.019216 70.256 By matching By MS/MS By matching By matching By matching By matching 1 456360 0 456360 0 0 0 0 8286 766 8399 37226 24605 24605 1 VEEENQGALEMIK QLTCSLRKVEEENQGA QGALEMIKRLKEENEK K V E I K R 1 0 1 0 0 1 4 1 0 1 1 1 1 0 0 0 0 0 0 1 0 13 0 1488.713 Q5M775-5;Q5M775-3;Q5M775-2;Q5M775-4;A8MV89;Q5M775 Q5M775-5 417 429 SPECC1 Cytospin-B yes no 2 0.034726 43.03 By matching By matching By matching By matching By matching By MS/MS 1 1057200 0 0 0 0 0 1057200 8287 48 8400 37227 24606 24606 1 VEEETSKASNLEGESNSSETPSTSTVWGGTCK VRRTKKLKVEEETSKA TVWGGTCKKEENDDDF K V E C K K 1 0 2 0 1 0 6 3 0 0 1 2 0 0 1 7 5 1 0 2 0 32 1 3387.4896 Q8N5C6 Q8N5C6 135 166 SRBD1 S1 RNA-binding domain-containing protein 1 yes yes 3 1.6051E-24 65.875 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 62102000 28964000 3315800 27197000 0 0 2624700 8288 1302 8401 37228;37229;37230;37231 24607;24608;24609 24608 3 VEEFCCEECMSK VQNNLGGKVEEFCCEE CCEECMSKYTVLFYQM K V E S K Y 0 0 0 0 3 0 4 0 0 0 0 1 1 1 0 1 0 0 0 1 0 12 0 1606.5772 Q5VZL5-2;Q5VZL5;H7C1I7;Q5VZL5-3;Q5VZL5-4 Q5VZL5-2 705 716 ZMYM4 Zinc finger MYM-type protein 4 yes no 2 0.018667 52.576 By matching By matching By matching By matching By matching By MS/MS 1 1 1 986630 0 206650 0 0 254480 525500 8289 1213 8402 37232;37233;37234 24610 24610 1 VEELQACVETAR EKAELSRKVEELQACV QACVETARQEQHEAQA K V E A R Q 2 1 0 0 1 1 3 0 0 0 1 0 0 0 0 0 1 0 0 2 0 12 0 1403.6715 Q14980-2;Q14980;F5H4J1;F5H6Y5 Q14980-2 652 663 NUMA1 Nuclear mitotic apparatus protein 1 yes no 2 0.011039 58.116 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3674100 477770 1430700 0 0 0 1765600 8290 1121 8403 37235;37236;37237 24611 24611 1 VEEVELPVEK VVTIIKGKVEEVELPV EVELPVEKVDIIISEW K V E E K V 0 0 0 0 0 0 4 0 0 0 1 1 0 0 1 0 0 0 0 3 0 10 0 1169.618 E9PKG1;Q99873-3;Q99873-2;G5E9B6;Q99873;H7C2I1;E9PNR9;E9PQ98;E9PIX6;H0YDE4;B4DJ87;Q9NR22-2;Q9NR22 E9PKG1 100 109 PRMT1;PRMT8 Protein arginine N-methyltransferase 1;Protein arginine N-methyltransferase 8 yes no 2 5.631E-77 149.33 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 7773600 1325300 1392500 0 0 803090 4252600 8291 454 8404 37238;37239;37240;37241 24612;24613;24614 24612 3 VEFNIRKPNEGADGQWK IQNKDRAKVEFNIRKP EGADGQWKKGFVLHKS K V E W K K 1 1 2 1 0 1 2 2 0 1 0 2 0 1 1 0 0 1 0 1 0 17 2 1986.9912 Q8NC51;Q8NC51-2;Q8NC51-3;Q8NC51-4 Q8NC51 304 320 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein no no 3;4 0.0018348 72.797 By matching By matching By MS/MS By matching By matching By MS/MS 2 2 2 2 72525000 0 0 29902000 7285500 1102700 34234000 8292 1316;1317 8405 37242;37243;37244;37245;37246;37247;37248;37249 24615;24616;24617;24618 24618 4 VEGQRLVYQFK YQRGILAKVEGQRLVY QRLVYQFKDMPKNIVV K V E F K D 0 1 0 0 0 2 1 1 0 0 1 1 0 1 0 0 0 0 1 2 0 11 1 1365.7405 B7Z8R4;Q15723-4;E9PCX3;Q15723-2;Q15723-3;Q15723-1;Q15723;D6R9B1;D6RHI1;E9PDQ9;P32519;Q99607 B7Z8R4 83 93 ELF2;ELF1;ELF4 ETS-related transcription factor Elf-2;ETS-related transcription factor Elf-1;ETS-related transcription factor Elf-4 yes no 3 0.01214 62.633 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 17469000 2805300 2194500 2524400 1817200 3021100 5106500 8293 196 8406 37250;37251;37252;37253;37254;37255 24619;24620;24621 24620 3 VEGVVQHGSKPGLFRK NNQQLALKVEGVVQHG SKPGLFRKIQSVCLNV K V E R K I 0 1 0 0 0 1 1 3 1 0 1 2 0 1 1 1 0 0 0 3 0 16 2 1736.9686 Q9NVH2-4;Q9NVH2-3;Q9NVH2-2;Q9NVH2 Q9NVH2-4 782 797 INTS7 Integrator complex subunit 7 yes no 4 0.0030164 53.377 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2770000 0 0 0 0 716370 2053600 8294 1548 8407 37256;37257 24622;24623 24622 2 VEIDQQQLTQQQLNGN RESKSRGKVEIDQQQL TQQQLNGN________ K V E G N - 0 0 2 1 0 6 1 1 0 1 2 0 0 0 0 0 1 0 0 1 0 16 0 1854.9072 B4E0G4;Q8IWS0;E9PC97 B4E0G4 316 331 PHF6 PHD finger protein 6 yes no 2 0 213.83 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 25711000 15049000 0 10662000 0 0 0 8295 152 8408 37258;37259 24624;24625;24626 24626 3 VEILANDQGNR VGVFQQGRVEILANDQ LANDQGNRTTPSYVAF R V E N R T 1 1 2 1 0 1 1 1 0 1 1 0 0 0 0 0 0 0 0 1 0 11 0 1227.6208 P17066;P48741 P17066 28 38 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 yes no 2 0.0015352 91.313 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 23202000 2390600 2754400 3021800 3053500 4678400 7303600 8296 846 8409 37260;37261;37262;37263;37264;37265 24627;24628;24629;24630 24630 4 VEILANDQGNRTTPSYVAFTDTER VGVFQQGRVEILANDQ VAFTDTERLVGDAAKS R V E E R L 2 2 2 2 0 1 2 1 0 1 1 0 0 1 1 1 4 0 1 2 0 24 1 2696.3042 P17066;P48741 P17066 28 51 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 yes no 3 1.4875E-41 104.18 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 74187000 22607000 51580000 0 0 0 0 8297 846 8410 37266;37267 24631;24632 24632 2 VEILNEHRGEK PIKVLCRRVEILNEHR LNEHRGEKLNRVKMVE R V E E K L 0 1 1 0 0 0 3 1 1 1 1 1 0 0 0 0 0 0 0 1 0 11 1 1322.6943 E9PD53;Q9NTJ3;Q9NTJ3-2;E7ET04;C9JR83 E9PD53 249 259 SMC4 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 4 yes no 3 0.017771 57.532 By matching By matching By matching By matching By matching By MS/MS 1 463190 0 0 0 0 0 463190 8298 419 8411 37268 24633 24633 1 VELCRYDPEGDNTGEQVAVK LGEGHFGKVELCRYDP TGEQVAVKSLKPESGG K V E V K S 1 1 1 2 1 1 3 2 0 0 1 1 0 0 1 0 1 0 1 3 0 20 1 2278.0536 P23458 P23458 889 908 JAK1 Tyrosine-protein kinase JAK1 yes yes 3 6.3978E-07 87.654 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 23237000 4041900 1773800 12932000 0 0 4489200 8299 868 8412 37269;37270;37271;37272 24634;24635;24636;24637;24638 24637 5 VELCSFSGYK ________________ LCSFSGYKIYPGHGRR K V E Y K I 0 0 0 0 1 0 1 1 0 0 1 1 0 1 0 2 0 0 1 1 0 10 0 1188.5485 C9JXB8;C9JNW5;P83731 C9JXB8 3 12 RPL24 60S ribosomal protein L24 yes no 2 6.1332E-05 107.55 By MS/MS By matching By matching By matching By matching By matching 1 8795200 8795200 0 0 0 0 0 8300 262 8413 37273 24639 24639 1 VELDNMPLRGK RTLAEIAKVELDNMPL DNMPLRGKQLRVRFAC K V E G K Q 0 1 1 1 0 0 1 1 0 0 2 1 1 0 1 0 0 0 0 1 0 11 1 1270.6704 Q15233;F5GYZ3;C9JYS8;C9IZL7;C9J4X2 Q15233 127 137 NONO Non-POU domain-containing octamer-binding protein yes no 2;3 0.0018158 87.184 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 2 26693000 5125900 3238500 4260600 4227900 1630900 8208900 8301 1133 8414 37274;37275;37276;37277;37278;37279;37280;37281;37282;37283;37284 24640;24641;24642;24643;24644;24645;24646 24645 7 VELQCECGR PVTACKAKVELQCECG ELQCECGRRKEMVICS K V E G R R 0 1 0 0 2 1 2 1 0 0 1 0 0 0 0 0 0 0 0 1 0 9 0 1149.4907 Q12986;Q12986-2;E9PG33 Q12986 886 894 NFX1 Transcriptional repressor NF-X1 yes no 2 0.018956 70.399 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1452800 0 0 0 0 580310 872520 8302 1066 8415 37285;37286 24647;24648 24647 2 VELTAVGSGSNAR CVSSSFSKVELTAVGS VGSGSNARGADPDGSA K V E A R G 2 1 1 0 0 0 1 2 0 0 1 0 0 0 0 2 1 0 0 2 0 13 0 1259.647 Q5H9F3-3;Q5H9F3-2;Q5H9F3 Q5H9F3-3 60 72 BCORL1 BCL-6 corepressor-like protein 1 yes no 2 0.002116 71.933 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1489000 0 368410 0 0 236020 884540 8303 1182 8416 37287;37288;37289 24649 24649 1 VELTAVGSGSNARGADPDGSATEK CVSSSFSKVELTAVGS PDGSATEKLGHKSEDK K V E E K L 4 1 1 2 0 0 2 4 0 0 1 1 0 0 1 3 2 0 0 2 0 24 1 2288.088 Q5H9F3-3;Q5H9F3-2;Q5H9F3 Q5H9F3-3 60 83 BCORL1 BCL-6 corepressor-like protein 1 yes no 3 0.040281 30 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 5973500 1002900 1243600 1592300 1148600 0 986040 8304 1182 8417 37290;37291;37292;37293;37294 24650 24650 1 VELVTGEEDEK PVVQMPEKVELVTGEE VTGEEDEKVLYSQRVK K V E E K V 0 0 0 1 0 0 4 1 0 0 1 1 0 0 0 0 1 0 0 2 0 11 0 1246.5929 P49792;E9PGT0 P49792 2023 2033 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 2 0.0067117 69.672 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 2 1 1 19180000 2375200 3241000 0 0 5639800 7924200 8305 945 8418 37295;37296;37297;37298;37299 24651;24652;24653 24651 3 VEMLETERGQQEAK NNTQLQARVEMLETER ERGQQEAKLLAERGHF R V E A K L 1 1 0 0 0 2 4 1 0 0 1 1 1 0 0 0 1 0 0 1 0 14 1 1646.7934 Q14980-2;Q14980;F5H4J1;F5H6Y5 Q14980-2 436 449 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.0011279 75.088 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 15190000 1733500 4291400 0 0 4452100 4713200 8306 1121 8419 37300;37301;37302;37303 24654;24655;24656;24657 24654 4 VENAPIVNRFDYAQCK CRVLKHLKVENAPIVN RFDYAQCKKLNMDQVL K V E C K K 2 1 2 1 1 1 1 0 0 1 0 1 0 1 1 0 0 0 1 2 0 16 1 1922.9309 Q6PIJ6-3;Q6PIJ6-2;Q6PIJ6 Q6PIJ6-3 719 734 FBXO38 F-box only protein 38 yes no 3 0.0027693 67.095 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 5462400 0 661630 0 0 0 4800800 8307 1230 8420 37304;37305 24658;24659;24660 24659 2 VENETDEGDKAQDGENEK QPEKAENKVENETDEG AQDGENEKNSEKEQDS K V E E K N 1 0 2 3 0 1 5 2 0 0 0 2 0 0 0 0 1 0 0 1 0 18 1 2005.8349 Q92922 Q92922 797 814 SMARCC1 SWI/SNF complex subunit SMARCC1 yes yes 3 0.0017317 65.949 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 4119300 494220 685680 820070 0 614100 1505300 8308 1365 8421 37306;37307;37308;37309;37310 24661 24661 1 VENGQEPVIK NNMVTTEKVENGQEPV NGQEPVIKLENRQEAR K V E I K L 0 0 1 0 0 1 2 1 0 1 0 1 0 0 1 0 0 0 0 2 0 10 0 1111.5873 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 409 418 ADAR Double-stranded RNA-specific adenosine deaminase no no 2 0.0028576 95.483 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 2 1 2 1 2 93211000 8584700 20074000 13332000 4165000 11359000 35697000 8309 352;968 8422 37311;37312;37313;37314;37315;37316;37317;37318;37319 24662;24663;24664;24665 24665 4 VENGQEPVIKLENR NNMVTTEKVENGQEPV PVIKLENRQEARPEPA K V E N R Q 0 1 2 0 0 1 3 1 0 1 1 1 0 0 1 0 0 0 0 2 0 14 1 1623.858 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 409 422 ADAR Double-stranded RNA-specific adenosine deaminase no no 2;3 8.857E-05 90.229 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 1 1 1 1 2 46861000 7859700 11778000 6161500 4386500 1614700 15060000 8310 352;968 8423 37320;37321;37322;37323;37324;37325;37326;37327 24666;24667;24668;24669;24670;24671;24672;24673;24674 24666 9 VENLFNEK KITDLKQKVENLFNEK VENLFNEKCGEALGLK K V E E K C 0 0 2 0 0 0 2 0 0 0 1 1 0 1 0 0 0 0 0 1 0 8 0 991.49746 P78347-2;P78347-4;P78347-3;B4DH52;P78347 P78347-2 696 703 GTF2I General transcription factor II-I yes no 2 0.0062105 98.582 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 2 2 43385000 2664800 5617400 6729100 4150000 11210000 13014000 8311 90 8424 37328;37329;37330;37331;37332;37333;37334;37335 24675;24676;24677;24678 24675 4 VENSNTIPVKTR PQTPSQTKVENSNTIP NTIPVKTRSAPTAPTP K V E T R S 0 1 2 0 0 0 1 0 0 1 0 1 0 0 1 1 2 0 0 2 0 12 1 1356.7361 Q14202-2 Q14202-2 787 798 ZMYM3 Zinc finger MYM-type protein 3 yes yes 3 0.037815 45.357 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3126700 0 821830 644900 0 551680 1108300 8312 1102 8425 37336;37337;37338;37339 24679 24679 1 VEPAGRSRFTPELQPK IHASQIQKVEPAGRSR FTPELQPKASQSRKRS K V E P K A 1 2 0 0 0 1 2 1 0 0 1 1 0 1 3 1 1 0 0 1 0 16 2 1810.969 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7;Q14676-4 Q14676 1791 1806 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 4 0.02179 39.961 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 9793500 0 1967000 3340500 3368600 1117400 0 8313 1109 8426 37340;37341;37342;37343 24680 24680 1 VEPFVCAQCR KSCASLLRVEPFVCAQ PFVCAQCRTDFTPHWK R V E C R T 1 1 0 0 2 1 1 0 0 0 0 0 0 1 1 0 0 0 0 2 0 10 0 1264.5693 Q8WXI9 Q8WXI9 415 424 GATAD2B Transcriptional repressor p66-beta yes yes 2 0.0088952 77.533 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 2 18932000 0 4774500 2512300 0 151800 11494000 8314 1344 8427 37344;37345;37346;37347;37348 24681;24682;24683 24682 3 VEPHATIAEIK EKLCFLDKVEPHATIA HATIAEIKNLFTKTHP K V E I K N 2 0 0 0 0 0 2 0 1 2 0 1 0 0 1 0 1 0 0 1 0 11 0 1206.6608 Q9NZ01;B3KSQ1 Q9NZ01 23 33 TECR Very-long-chain enoyl-CoA reductase yes no 3 0.0020101 87.568 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 5199100 325260 658530 489500 296370 1122100 2307400 8315 1565 8428 37349;37350;37351;37352;37353;37354 24684;24685 24684 2 VEPIHAVVLPR LGRHAEGRVEPIHAVV IHAVVLPRGKSLDQCV R V E P R G 1 1 0 0 0 0 1 0 1 1 1 0 0 0 2 0 0 0 0 3 0 11 0 1228.7292 Q8N5A5-3;Q8N5A5-2;Q8N5A5 Q8N5A5-3 331 341 ZGPAT Zinc finger CCCH-type with G patch domain-containing protein yes no 3 0.0040554 74.841 By matching By matching By matching By matching By matching By MS/MS 1 554440 0 0 0 0 0 554440 8316 1301 8429 37355 24686 24686 1 VEPLEEAIPLPPTKK VESQPQVKVEPLEEAI IPLPPTKKRKKEKGQM K V E K K R 1 0 0 0 0 0 3 0 0 1 2 2 0 0 4 0 1 0 0 1 0 15 1 1659.9447 O15446;O15446-2 O15446 315 329 CD3EAP DNA-directed RNA polymerase I subunit RPA34 yes no 3 0.00035732 74.966 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 38839000 0 0 0 5368300 33471000 0 8317 706 8430 37356;37357;37358 24687;24688;24689 24689 3 VEPMTYLGSSQNEVLNTKPDYQK EAKITEVKVEPMTYLG NTKPDYQKILQNQSKV K V E Q K I 0 0 2 1 0 2 2 1 0 0 2 2 1 0 2 2 2 0 2 2 0 23 1 2640.2741 Q9H410;B4DWT2;Q5JW54;Q9H410-2;Q5JW58;Q9H410-3 Q9H410 254 276 DSN1 Kinetochore-associated protein DSN1 homolog yes no 3 6.0612E-06 58.093 By matching By matching By matching By MS/MS By matching By matching 1 0 0 0 0 0 0 0 8318 1488 8431 37359 24690 24690 1 VEPSALACR PNNCSGKKVEPSALAC EPSALACRSQNLKESS K V E C R S 2 1 0 0 1 0 1 0 0 0 1 0 0 0 1 1 0 0 0 1 0 9 0 1001.4964 Q9Y4C1;F5H4E6;F5H070;F8WE62 Q9Y4C1 472 480 KDM3A Lysine-specific demethylase 3A yes no 2 0.015798 74.92 By matching By matching By matching By matching By matching By MS/MS 1 1 2526600 0 0 627610 0 0 1899000 8319 516 8432 37360;37361 24691 24691 1 VEPSALACRSQNLK PNNCSGKKVEPSALAC ACRSQNLKESSVKVDN K V E L K E 2 1 1 0 1 1 1 0 0 0 2 1 0 0 1 2 0 0 0 1 0 14 1 1571.809 Q9Y4C1;F5H4E6;F5H070;F8WE62 Q9Y4C1 472 485 KDM3A Lysine-specific demethylase 3A yes no 3 0.02587 43.03 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 6078900 0 2489600 1264100 683020 0 1642100 8320 516 8433 37362;37363;37364;37365 24692 24692 1 VEPVGDVVSTRDPVK RRVLRAPKVEPVGDVV VSTRDPVKSQSKSNTS K V E V K S 0 1 0 2 0 0 1 1 0 0 0 1 0 0 2 1 1 0 0 5 0 15 1 1595.8519 P46013;F5H4V4;P46013-2 P46013 2968 2982 MKI67 Antigen KI-67 no no 2;3 0.00079785 76.311 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 3 2 2 252840000 19874000 46919000 43735000 19197000 15807000 107300000 8321 919;920 8434 37366;37367;37368;37369;37370;37371;37372;37373;37374;37375;37376;37377 24693;24694;24695;24696;24697;24698;24699 24693 7 VEPVGDVVSTRDPVKSQSK RRVLRAPKVEPVGDVV DPVKSQSKSNTSLPPL K V E S K S 0 1 0 2 0 1 1 1 0 0 0 2 0 0 2 3 1 0 0 5 0 19 2 2026.0695 P46013;F5H4V4;P46013-2 P46013 2968 2986 MKI67 Antigen KI-67 no no 3;4 0.00024546 71.601 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 2 2 2 276770000 51381000 47184000 77132000 28679000 27816000 44574000 8322 919;920 8435 37378;37379;37380;37381;37382;37383;37384;37385;37386;37387;37388;37389;37390 24700;24701;24702;24703;24704;24705;24706 24701 6 VEPYSLTAQQSSLIR RRTSKKTKVEPYSLTA AQQSSLIREDKSNAKL K V E I R E 1 1 0 0 0 2 1 0 0 1 2 0 0 0 1 3 1 0 1 1 0 15 0 1690.889 B5ME40;F5GXG0;Q96T88 B5ME40 285 299 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 2 0.0071676 50.158 By matching By MS/MS By matching By matching By matching By matching 1 11467000 0 11467000 0 0 0 0 8323 175 8436 37391 24707 24707 1 VEPYSLTAQQSSLIREDK RRTSKKTKVEPYSLTA SSLIREDKSNAKLWNE K V E D K S 1 1 0 1 0 2 2 0 0 1 2 1 0 0 1 3 1 0 1 1 0 18 1 2063.0535 B5ME40;F5GXG0;Q96T88 B5ME40 285 302 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 3 4.0582E-182 158.17 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 55012000 13056000 0 0 0 0 41956000 8324 175 8437 37392;37393 24708;24709;24710 24710 3 VEPYSLTAQQSSLIREDKSNAK RRTSKKTKVEPYSLTA REDKSNAKLWNEVLAS K V E A K L 2 1 1 1 0 2 2 0 0 1 2 2 0 0 1 4 1 0 1 1 0 22 2 2463.2605 B5ME40;F5GXG0;Q96T88 B5ME40 285 306 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 3;4 1.2711E-06 77.357 By MS/MS By matching By MS/MS By matching By MS/MS By matching 2 2 2 85373000 33492000 0 49661000 0 2220900 0 8325 175 8438 37394;37395;37396;37397;37398;37399 24711;24712;24713;24714;24715;24716 24711 6 VEQATKPSFER SLDGKAIKVEQATKPS ATKPSFERGRHGPPPP K V E E R G 1 1 0 0 0 1 2 0 0 0 0 1 0 1 1 1 1 0 0 1 0 11 1 1290.6568 Q96E39 Q96E39 81 91 RBMXL1 RNA binding motif protein, X-linked-like-1 yes yes 2;3 0.013342 72.34 By matching By matching By matching By matching By MS/MS By matching 1 2 2 1 15334000 0 0 955250 2373100 10578000 1428200 8326 1379 8439 37400;37401;37402;37403;37404;37405 24717;24718 24717 2 VEQATKPSFESGR SLDGKAIKVEQATKPS KPSFESGRRGPPPPPR K V E G R R 1 1 0 0 0 1 2 1 0 0 0 1 0 1 1 2 1 0 0 1 0 13 1 1434.7103 H3BT71;P38159-2;P38159;H0Y6E7 H3BT71 81 93 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 3 0.0024987 65.043 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 11451000 143490 1667900 0 484220 6286400 2869000 8327 649 8440 37406;37407;37408;37409;37410 24719;24720;24721 24719 3 VEQLGAEGNVEESQK EIGKLLAKVEQLGAEG GNVEESQKVMDEVEKA K V E Q K V 1 0 1 0 0 2 4 2 0 0 1 1 0 0 0 1 0 0 0 2 0 15 0 1615.7689 B7Z500;Q9Y383-2;Q9Y383;B7Z4Q3 B7Z500 137 151 LUC7L2;C7orf55 Putative RNA-binding protein Luc7-like 2;UPF0562 protein C7orf55 yes no 2 1.0362E-70 135.47 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 1 1 1 1 1 19788000 3336000 6295400 3439400 1802500 4630500 284120 8328 186 8441 37411;37412;37413;37414;37415;37416;37417 24722;24723;24724;24725 24725 3 VEQLGAEGNVEESQKVMDEVEKAR EIGKLLAKVEQLGAEG MDEVEKARAKKREAEE K V E A R A 2 1 1 1 0 2 6 2 0 0 1 2 1 0 0 1 0 0 0 4 0 24 2 2673.2916 B7Z500;Q9Y383-2;Q9Y383;B7Z4Q3 B7Z500 137 160 LUC7L2;C7orf55 Putative RNA-binding protein Luc7-like 2;UPF0562 protein C7orf55 yes no 4 0.0022641 49.662 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 61289000 11243000 7736000 23899000 18412000 0 0 8329 186 8442 37418;37419;37420;37421 24726;24727;24728 24728 2 VEQLQQEYTEMK VRMTANRKVEQLQQEY QQEYTEMKALLDASET K V E M K A 0 0 0 0 0 3 3 0 0 0 1 1 1 0 0 0 1 0 1 1 0 12 0 1524.713 Q14258 Q14258 238 249 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 3.0573E-97 149.23 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 13576000 4043200 0 4650400 3621400 1261300 0 8330 1105 8443 37422;37423;37424;37425 24729;24730;24731 24729 3 VEQPVIEEPALK KKMKSKKKVEQPVIEE VIEEPALKRKKKKKRK K V E L K R 1 0 0 0 0 1 3 0 0 1 1 1 0 0 2 0 0 0 0 2 0 12 0 1350.7395 Q1ED39;H3BPL4 Q1ED39 276 287 KNOP1 Lysine-rich nucleolar protein 1 yes no 2 0.0040708 66.004 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 7186400 0 1031600 2621900 0 831090 2701700 8331 1157 8444 37426;37427;37428;37429 24732;24733;24734 24734 3 VEQTAFSFLRDHLRCLHVK HLCHCPAKVEQTAFSF HLRCLHVKFTDVAEIP K V E V K F 1 2 0 1 1 1 1 0 2 0 3 1 0 2 0 1 1 0 0 2 0 19 2 2355.227 Q7L1W4 Q7L1W4 527 545 LRRC8D Leucine-rich repeat-containing protein 8D yes yes 4 0.0039749 46.873 By matching By matching By matching By matching By matching By MS/MS 1 13434000 0 0 0 0 0 13434000 8332 1244 8445 37430 24735 24735 1 VERADGYEPPVQESV TGDETGAKVERADGYE EPPVQESV________ K V E S V - 1 1 0 1 0 1 3 1 0 0 0 0 0 0 2 1 0 0 1 3 0 15 1 1673.7897 D6RAT0;P61247;D6R9B6;H0Y9Y4 D6RAT0 213 227 RPS3A 40S ribosomal protein S3a yes no 2 1.0539E-171 163.62 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 2 2 1 104570000 0 6787700 6305700 24809000 58495000 8174400 8333 321 8446 37431;37432;37433;37434;37435;37436;37437 24736;24737;24738 24736 3 VERLTMQVSSLQR EGKREKKKVERLTMQV MQVSSLQREPFTIAQG K V E Q R E 0 2 0 0 0 2 1 0 0 0 2 0 1 0 0 2 1 0 0 2 0 13 1 1545.8297 P35659;D6R9L5 P35659 63 75 DEK Protein DEK yes no 3 8E-24 113.53 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 66275000 11900000 7885100 13711000 8686200 896560 23196000 8334 901 8447 37438;37439;37440;37441;37442;37443 24739;24740;24741;24742;24743;24744;24745 24743 7 VERLTMQVSSLQREPFTIAQGK EGKREKKKVERLTMQV PFTIAQGKGQKLCEIE K V E G K G 1 2 0 0 0 3 2 1 0 1 2 1 1 1 1 2 2 0 0 2 0 22 2 2517.3373 P35659;D6R9L5 P35659 63 84 DEK Protein DEK yes no 4 1.2469E-06 77.469 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 56013000 0 0 0 36886000 19127000 0 8335 901 8448 37444;37445 24746;24747 24746 2 VERPEAGPLQPQPPQIQNGPMNGCEK GNKDAKDKVERPEAGP GPMNGCEKDSSSTDSA K V E E K D 1 1 2 0 1 4 3 3 0 1 1 1 1 0 6 0 0 0 0 1 0 26 1 2870.3803 F8VZ02;C9JGM8;C9JW67;F8W6C2;Q9NUQ6-2;F2Z2S1;C9JKE4;F8VT91;B8ZZZ7;Q9NUQ6;B4DT67;C9J8M7 F8VZ02 88 113 SPATS2L SPATS2-like protein yes no 3 0.037983 28.622 By matching By matching By matching By matching By matching By MS/MS 1 3099900 0 0 0 0 0 3099900 8336 246 8449 37446 24748 24748 1 VETFSSLK SKEAFFSRVETFSSLK VETFSSLKWAGKPFEL R V E L K W 0 0 0 0 0 0 1 0 0 0 1 1 0 1 0 2 1 0 0 1 0 8 0 909.48075 C9J0I9;Q86WB0-2;Q86WB0;C9J672;Q86WB0-3 C9J0I9 82 89 ZC3HC1 Nuclear-interacting partner of ALK yes no 2 0.027829 72.879 By matching By matching By matching By matching By matching By MS/MS 1 772580 0 0 0 0 0 772580 8337 222 8450 37447 24749 24749 1 VETLSPESALQGSPR PALPVITKVETLSPES SALQGSPRSAASTPAG K V E P R S 1 1 0 0 0 1 2 1 0 0 2 0 0 0 2 3 1 0 0 1 0 15 0 1569.7999 Q99958 Q99958 228 242 FOXC2 Forkhead box protein C2 yes yes 2 3.752E-21 111.64 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 13190000 2940000 5819100 0 0 0 4430500 8338 1434 8451 37448;37449;37450 24750;24751;24752 24750 2 VETPSHPGGVSEEFWER DRHYRSARVETPSHPG VSEEFWERSRQRERER R V E E R S 0 1 0 0 0 0 4 2 1 0 0 0 0 1 2 2 1 1 0 2 0 17 0 1941.8857 Q92620;H3BQT9 Q92620 115 131 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes no 3 1.2603E-21 104.21 By matching By MS/MS By matching By matching By matching By matching 1 1 9472300 0 5994600 0 3477700 0 0 8339 1356 8452 37451;37452 24753 24753 1 VETQTEELKQNESR SENKLETKVETQTEEL ELKQNESRTTECKQNE K V E S R T 0 1 1 0 0 2 4 0 0 0 1 1 0 0 0 1 2 0 0 1 0 14 1 1689.817 Q6KC79-2;Q6KC79;Q6KC79-3 Q6KC79-2 644 657 NIPBL Nipped-B-like protein yes no 3 1.313E-41 119.25 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 12308000 1335300 2551100 0 0 3049200 5372000 8340 1222 8453 37453;37454;37455;37456 24754;24755 24754 2 VETTDCPVPPK DSLRHSPKVETTDCPV TDCPVPPKRMRREATR K V E P K R 0 0 0 1 1 0 1 0 0 0 0 1 0 0 3 0 2 0 0 2 0 11 0 1241.5962 A6NHR9 A6NHR9 1977 1987 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 yes yes 2 0.0041726 79.659 By MS/MS By matching By matching By matching By MS/MS By MS/MS 3 2 1 2 3 3 6939100 1571700 870620 297630 696820 1343600 2158700 8341 23 8454 37457;37458;37459;37460;37461;37462;37463;37464;37465;37466;37467;37468;37469;37470 24756;24757;24758;24759;24760 24756 5 VETVHCSACSVYIPALHSSVQQHLKSPDHIKGK TVDDHMMKVETVHCSA SPDHIKGKQAYKEQIK K V E G K Q 2 0 0 1 2 2 1 1 4 2 2 3 0 0 2 5 1 0 1 4 0 33 2 3711.8614 Q5BKZ1;Q5BKZ1-3 Q5BKZ1 402 434 ZNF326 DBIRD complex subunit ZNF326 yes no 5;7 8.5505E-11 54.466 By matching By matching By matching By matching By matching By MS/MS 2 38158000 0 0 0 0 0 38158000 8342 1177 8455 37471;37472 24761;24762 24762 2 VETVSQPSESPK SSDLADEKVETVSQPS SQPSESPKDTIDKTKK K V E P K D 0 0 0 0 0 1 2 0 0 0 0 1 0 0 2 3 1 0 0 2 0 12 0 1286.6354 Q99590-2;F8VXG7;Q99590;F8W028 Q99590-2 452 463 SCAF11 Protein SCAF11 yes no 2 1.7815E-97 151.55 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 26333000 4820600 4152800 3247300 2899800 4291100 6921600 8343 547 8456 37473;37474;37475;37476;37477;37478;37479 24763;24764;24765;24766;24767;24768;24769;24770;24771 24767 9 VEVKEELLAVGK RPRTRAQKVEVKEELL EELLAVGKLTQTSGET K V E G K L 1 0 0 0 0 0 3 1 0 0 2 2 0 0 0 0 0 0 0 3 0 12 1 1312.7602 P46013;F5H4V4;P46013-2 P46013 2849 2860 MKI67 Antigen KI-67 no no 2;3 2.6908E-79 144.28 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 1 109150000 58027000 0 35499000 401860 2480200 12739000 8344 919;920 8457 37480;37481;37482;37483;37484;37485;37486 24772;24773;24774;24775;24776;24777 24773 6 VEVLKEQVSIK ERNELNEKVEVLKEQV LKEQVSIKAAIKAANR K V E I K A 0 0 0 0 0 1 2 0 0 1 1 2 0 0 0 1 0 0 0 3 0 11 1 1270.7497 Q9NUQ3;Q9NUQ3-2 Q9NUQ3 452 462 TXLNG Gamma-taxilin yes no 3 0.014541 59.84 By MS/MS By matching By matching By matching By matching By matching 1 1 1 10538000 869330 0 0 534930 0 9134000 8345 1546 8458 37487;37488;37489 24778 24778 1 VEVPSSASQAK FFVAVIERVEVPSSAS PSSASQAKASAPERTP R V E A K A 2 0 0 0 0 1 1 0 0 0 0 1 0 0 1 3 0 0 0 2 0 11 0 1101.5666 C9JJU9;Q96P11-2 C9JJU9 387 397 NSUN5 Putative methyltransferase NSUN5 yes no 2 0.00048753 102.4 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 14517000 0 3058100 2146500 1028700 2609700 5674300 8346 255 8459 37490;37491;37492;37493;37494 24779;24780;24781;24782 24781 3 VEYSEEELKTHISK GSGSKRPKVEYSEEEL ELKTHISKGTLGKFTV K V E S K G 0 0 0 0 0 0 4 0 1 1 1 2 0 0 0 2 1 0 1 1 0 14 1 1690.8414 B1AHC9;B1AHC8;P12956;F5H1I8 B1AHC9 507 520 XRCC6 X-ray repair cross-complementing protein 6 yes no 3 0.0031868 60.657 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 12737000 1981500 1228500 1127000 925820 3917800 3556700 8347 60 8460 37495;37496;37497;37498;37499;37500 24783;24784 24783 2 VFCVEEEDSESSLQK LEKEKGSRVFCVEEED DSESSLQKRRRKKKKK R V F Q K R 0 0 0 1 1 1 4 0 0 0 1 1 0 1 0 3 0 0 0 2 0 15 0 1784.7775 Q14684-2;Q14684 Q14684-2 366 380 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 2;3 1.7642E-05 90.412 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 2 1 1 2 98271000 21859000 14373000 9642700 6006800 22731000 23659000 8348 1111 8461 37501;37502;37503;37504;37505;37506;37507;37508;37509 24785;24786;24787;24788;24789;24790;24791;24792 24791 8 VFETLEAR ILHVTKKKVFETLEAR VFETLEARMTEACIRG K V F A R M 1 1 0 0 0 0 2 0 0 0 1 0 0 1 0 0 1 0 0 1 0 8 0 963.50255 D6RH30;P19838;P19838-2 D6RH30 158 165 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes no 2 0.02554 75.043 By matching By matching By MS/MS By matching By matching By matching 1 1 1 4630100 0 1068100 797450 0 0 2764500 8349 329 8462 37510;37511;37512 24793 24793 1 VFEVMLATDRSHYAK NGIIKTDKVFEVMLAT TDRSHYAKCNPYMDSP K V F A K C 2 1 0 1 0 0 1 0 1 0 1 1 1 1 0 1 1 0 1 2 0 15 1 1765.8821 F8WDT3;F8WAV5;F8WAX2;P22061;P22061-2;H7BY58 F8WDT3 86 100 PCMT1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase;Protein-L-isoaspartate O-methyltransferase yes no 3;4 1.5762E-86 137.62 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 2 3 2 2 60704000 0 0 19038000 5687300 5131500 30847000 8350 566 8463 37513;37514;37515;37516;37517;37518;37519;37520;37521;37522 24794;24795;24796;24797;24798;24799;24800;24801 24797 8 VFFTCNACGESVK ________________ NACGESVKKIQVEKHV M V F V K K 1 0 1 0 2 0 1 1 0 0 0 1 0 2 0 1 1 0 0 2 0 13 0 1517.6643 Q9NX58;D6RDJ1 Q9NX58 2 14 LYAR Cell growth-regulating nucleolar protein yes no 2 3.1834E-47 130.15 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 27770000 5988900 4246200 1411500 815810 12379000 2928000 8351 1559 8464 37523;37524;37525;37526;37527;37528 24802;24803;24804;24805;24806 24806 4 VFFTCNACGESVKK ________________ ACGESVKKIQVEKHVS M V F K K I 1 0 1 0 2 0 1 1 0 0 0 2 0 2 0 1 1 0 0 2 0 14 1 1645.7592 Q9NX58;D6RDJ1 Q9NX58 2 15 LYAR Cell growth-regulating nucleolar protein yes no 3 0.00057287 72.891 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 16325000 3905900 1931900 735060 0 6586400 3165500 8352 1559 8465 37529;37530;37531;37532;37533 24807;24808;24809;24810 24809 4 VFGSLERGLDK TPKRKGAKVFGSLERG SLERGLDKVITVLTRS K V F D K V 0 1 0 1 0 0 1 2 0 0 2 1 0 1 0 1 0 0 0 1 0 11 1 1219.6561 F5H2R4;F5H0Y0;F5H689;Q14680;B7Z6Y0;B7Z7Q1;A6P3A8;A6P3A7 F5H2R4 455 465 MELK Maternal embryonic leucine zipper kinase yes no 3 0.037069 49.466 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3100800 334110 680450 684700 0 0 1401500 8353 507 8466 37534;37535;37536;37537 24811 24811 1 VFIGNLNTLVVKK DPRSMNSRVFIGNLNT LNTLVVKKSDVEAIFS R V F K K S 0 0 2 0 0 0 0 1 0 1 2 2 0 1 0 0 1 0 0 3 0 13 1 1443.8813 G3V576;G3V4W0;B4DY08;G3V4C1;P07910-2;B2R603;G3V2Q1;P07910;P07910-3;G3V555;G3V575;P07910-4;O60812;G3V2H6;G3V4M8;Q569J8;G3V5X6;G3V3K6;G3V251;B4DSU6 G3V576 18 30 HNRNPC;HNRNPCL1;HNRPC Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 1 yes no 3 0.0010009 84.352 By matching By matching By matching By matching By MS/MS By matching 1 19516000 0 0 0 0 19516000 0 8354 68 8467 37538 24812 24812 1 VFIQHITLSDEER VLELPERKVFIQHITL ITLSDEERKIYQSVKN K V F E R K 0 1 0 1 0 1 2 0 1 2 1 0 0 1 0 1 1 0 0 1 0 13 0 1585.81 Q14527;Q14527-2;H7C5K0 Q14527 663 675 HLTF Helicase-like transcription factor yes no 3 0.00030375 93.766 By matching By matching By matching By matching By matching By MS/MS 1 19849000 0 0 0 0 0 19849000 8355 1107 8468 37539 24813 24813 1 VFIQHITLSDEERK VLELPERKVFIQHITL TLSDEERKIYQSVKNE K V F R K I 0 1 0 1 0 1 2 0 1 2 1 1 0 1 0 1 1 0 0 1 0 14 1 1713.905 Q14527;Q14527-2;H7C5K0 Q14527 663 676 HLTF Helicase-like transcription factor yes no 2;3;4 2.5431E-12 105.14 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 2 2 2 1 3 122360000 3958000 14503000 39300000 0 807110 63797000 8356 1107 8469 37540;37541;37542;37543;37544;37545;37546;37547;37548;37549 24814;24815;24816;24817;24818;24819;24820;24821;24822;24823 24817 9 VFKHKELQQQLVDAK LREEHIDKVFKHKELQ QQQLVDAKLQQTTQLI K V F A K L 1 0 0 1 0 3 1 0 1 0 2 3 0 1 0 0 0 0 0 2 0 15 2 1810.0101 Q9NUQ3;Q9NUQ3-2 Q9NUQ3 293 307 TXLNG Gamma-taxilin yes no 4 0.0022143 59.225 By matching By matching By matching By matching By MS/MS By matching 1 1 1 2412100 0 0 696360 702350 1013400 0 8357 1546 8470 37550;37551;37552 24824 24824 1 VFLNGNKLPVK AGSTKDVKVFLNGNKL NGNKLPVKGFRSYVDM K V F V K G 0 0 2 0 0 0 0 1 0 0 2 2 0 1 1 0 0 0 0 2 0 11 1 1227.7339 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5 P11388 255 265 TOP2A DNA topoisomerase 2-alpha yes no 3 0.0043744 77.662 By matching By matching By matching By matching By matching By MS/MS 1 2341100 0 0 0 0 0 2341100 8358 655 8471 37553 24825 24825 1 VFLNGNKLPVKGFR AGSTKDVKVFLNGNKL KLPVKGFRSYVDMYLK K V F F R S 0 1 2 0 0 0 0 2 0 0 2 2 0 2 1 0 0 0 0 2 0 14 2 1587.9249 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5 P11388 255 268 TOP2A DNA topoisomerase 2-alpha yes no 3 0.016382 65.179 By matching By matching By matching By matching By matching By MS/MS 1 4974700 0 0 0 0 0 4974700 8359 655 8472 37554 24826 24826 0 VFLQDHCLAEGYGTK PNRTWRCRVFLQDHCL LAEGYGTKKTSKHAAA R V F T K K 1 0 0 1 1 1 1 2 1 0 2 1 0 1 0 0 1 0 1 1 0 15 0 1736.8192 O15226;G3V1N1 O15226 380 394 NKRF NF-kappa-B-repressing factor yes no 3 0.00541 51.073 By MS/MS By matching By matching By matching By matching By matching 1 9231100 9231100 0 0 0 0 0 8360 578 8473 37555 24827 24827 1 VFLQDHCLAEGYGTKK PNRTWRCRVFLQDHCL AEGYGTKKTSKHAAAD R V F K K T 1 0 0 1 1 1 1 2 1 0 2 2 0 1 0 0 1 0 1 1 0 16 1 1864.9142 O15226;G3V1N1 O15226 380 395 NKRF NF-kappa-B-repressing factor yes no 3 0.0016243 54.237 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2987900 888620 717910 0 0 0 1381400 8361 578 8474 37556;37557;37558 24828 24828 1 VFNLYPR VTSTNAAKVFNLYPRK KVFNLYPRKGRIAVGS K V F P R K 0 1 1 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 1 1 0 7 0 907.49159 B4DR31;Q16555;Q8NAN9 B4DR31 355 361 DPYSL2 Dihydropyrimidinase-related protein 2 yes no 2 0.0099703 103.29 By matching By matching By matching By matching By matching By MS/MS 1 4125900 0 0 0 0 0 4125900 8362 118 8475 37559 24829;24830 24829 2 VFQFLNAK RYARTDGKVFQFLNAK VFQFLNAKCESAFLSK K V F A K C 1 0 1 0 0 1 0 0 0 0 1 1 0 2 0 0 0 0 0 1 0 8 0 965.53345 C9JXB8;C9JNW5;P83731 C9JXB8 28 35 RPL24 60S ribosomal protein L24 yes no 2 4.9215E-09 120.49 By matching By matching By matching By MS/MS By matching By matching 1 12293000 0 0 0 12293000 0 0 8363 262 8476 37560 24831 24831 1 VFQGTDEQLNDLYHNHQR ELEEKMEKVFQGTDEQ DLYHNHQRTVREKERK K V F Q R T 0 1 2 2 0 3 1 1 2 0 2 0 0 1 0 0 1 0 1 1 0 18 0 2213.025 Q92878-2;Q92878;Q92878-3;E7EN38;E7ESD9 Q92878-2 302 319 RAD50 DNA repair protein RAD50 yes no 3;4 4.3751E-74 128.82 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 2 2 58770000 15590000 5311500 18418000 3251100 7148600 9050000 8364 1362 8477 37561;37562;37563;37564;37565;37566;37567;37568;37569;37570;37571;37572 24832;24833;24834;24835;24836;24837;24838;24839;24840;24841 24832 10 VFQSLPHENKPLTLSNYQTNKAK DEDFVHLRVFQSLPHE NYQTNKAKHDELTYF_ R V F A K H 1 0 3 0 0 2 1 0 1 0 3 3 0 1 2 2 2 0 1 1 0 23 2 2656.3973 P04080 P04080 69 91 CSTB Cystatin-B yes yes 4;5 0.0027582 44.848 By matching By matching By matching By matching By matching By MS/MS 1 2 8060200 1781100 0 0 0 0 6279100 8365 786 8478 37573;37574;37575 24842;24843 24843 1 VFQVLNEK IGSGGSSKVFQVLNEK VFQVLNEKKQIYAIKY K V F E K K 0 0 1 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 0 2 0 8 0 975.53893 P33981-2;P33981 P33981-2 538 545 TTK Dual specificity protein kinase TTK yes no 2 0.0020801 111.17 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 16998000 1206600 2938600 2856400 2180100 919340 6897000 8366 891 8479 37576;37577;37578;37579;37580;37581 24844;24845;24846 24844 3 VFRPRTPPEAIALCSR IKAHPWTKVFRPRTPP EAIALCSRLLEYTPTA K V F S R L 2 3 0 0 1 0 1 0 0 1 1 0 0 1 3 1 1 0 0 1 0 16 2 1869.0043 P49841;P49841-2;F5H615 P49841 304 319 GSK3B Glycogen synthase kinase-3 beta yes no 4 0.0017322 59.673 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 17122000 3004400 1733400 6473500 1225400 1219000 3466200 8367 946 8480 37582;37583;37584;37585;37586;37587 24847;24848;24849 24847 3 VFRSQCLQVPER TGGARSWKVFRSQCLQ QCLQVPEREAQDAQKQ K V F E R E 0 2 0 0 1 2 1 0 0 0 1 0 0 1 1 1 0 0 0 2 0 12 1 1517.7773 Q9BRP1 Q9BRP1 95 106 PDCD2L Programmed cell death protein 2-like yes yes 3 0.0097929 59.294 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 11533000 0 2706100 0 2054800 6772200 0 8368 1442 8481 37588;37589;37590 24850;24851 24850 2 VFRSQCLQVPEREAQDAQK TGGARSWKVFRSQCLQ REAQDAQKQGNSLAAE K V F Q K Q 2 2 0 1 1 4 2 0 0 0 1 1 0 1 1 1 0 0 0 2 0 19 2 2288.1332 Q9BRP1 Q9BRP1 95 113 PDCD2L Programmed cell death protein 2-like yes yes 4 2.4493E-26 103.04 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 73784000 10091000 6848700 7914600 14701000 20570000 13658000 8369 1442 8482 37591;37592;37593;37594;37595;37596 24852;24853;24854;24855;24856;24857;24858;24859;24860 24858 8 VFRVYQGQQPGTCMGSK AVSTAMKKVFRVYQGQ PGTCMGSKRSQVSSPC K V F S K R 0 1 0 0 1 3 0 3 0 0 0 1 1 1 1 1 1 0 1 2 0 17 1 1941.9189 H0YCY5;E9PNY0;G8JLP0;Q9UIF7-6;Q9UIF7-5;Q9UIF7-4;Q9UIF7-3;Q9UIF7-2;Q9UIF7;E5KP25 H0YCY5 157 173 MUTYH A/G-specific adenine DNA glycosylase yes no 3 0.0021521 55.097 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 11888000 1073200 2252800 1726400 948110 1461900 4425500 8370 337 8483 37597;37598;37599;37600;37601;37602 24861;24862;24863;24864;24865 24865 5 VFSHSSNLIK YECEECGKVFSHSSNL SHSSNLIKHQRTHTGE K V F I K H 0 0 1 0 0 0 0 0 1 1 1 1 0 1 0 3 0 0 0 1 0 10 0 1130.6084 B7Z7H3;Q969J2;H7C1Y5;H7BY15 B7Z7H3 229 238 ZKSCAN4 Zinc finger protein with KRAB and SCAN domains 4 yes no 2 0.027871 58.246 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 3978700 0 0 704890 485860 680750 2107200 8371 194 8484 37603;37604;37605;37606 24866 24866 1 VFSVNGAR KFSIFEEKVFSVNGAR VFSVNGARGNHMDFGQ K V F A R G 1 1 1 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 2 0 8 0 848.45045 P57060 P57060 281 288 RWDD2B RWD domain-containing protein 2B yes yes 2 0.0067418 106.36 By matching By matching By matching By matching By matching By MS/MS 1 1 2846400 0 1026000 0 0 0 1820500 8372 974 8485 37607;37608 24867 24867 1 VFVEDDENSSQK PTCPNRKKVFVEDDEN DDENSSQKRSVIVCQS K V F Q K R 0 0 1 2 0 1 2 0 0 0 0 1 0 1 0 2 0 0 0 2 0 12 0 1395.6154 Q9ULJ3-2;Q9ULJ3 Q9ULJ3-2 135 146 ZBTB21 Zinc finger and BTB domain-containing protein 21 yes no 2 0.001934 86.772 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 6870500 434640 1131400 1346500 643150 1179700 2135100 8373 1607 8486 37609;37610;37611;37612;37613;37614 24868;24869;24870;24871;24872;24873 24870 6 VGADITVLRER TLHRMAEKVGADITVL DITVLREREVDYDSDM K V G E R E 1 2 0 1 0 0 1 1 0 1 1 0 0 0 0 0 1 0 0 2 0 11 1 1227.6935 H0Y7A5;Q9BX10-2;Q9BX10-4;Q9BX10 H0Y7A5 100 110 GTPBP2 GTP-binding protein 2 yes no 3 0.0025259 94.309 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 12263000 2571600 1509200 2081400 2554900 429260 3116700 8374 613 8487 37615;37616;37617;37618;37619;37620;37621 24874;24875;24876;24877 24877 4 VGASASDGSVCVLDLRK CWNAAGDKVGASASDG VCVLDLRK________ K V G R K - 2 1 0 2 1 0 0 2 0 0 2 1 0 0 0 3 0 0 0 3 0 17 1 1732.8778 B7Z475;Q9BZK7 B7Z475 360 376 TBL1XR1 F-box-like/WD repeat-containing protein TBL1XR1 no no 3 0.00012814 84.508 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 13530000 0 3829400 0 1443800 0 8256500 8375 185 8488 37622;37623;37624 24878;24879;24880 24879 3 VGATAAVYSAAILEYLTAEVLELAGNASK TRTTSHGRVGATAAVY ELAGNASKDLKVKRIT R V G S K D 8 0 1 0 0 0 3 2 0 1 4 1 0 0 0 2 2 0 2 3 0 29 0 2894.5277 Q71UI9;P0C0S5;A6NKY0;Q71UI9-2;C9J0D1 Q71UI9 47 75 H2AFV;H2AFZ Histone H2A.V;Histone H2A.Z;Histone H2A yes no 3 0.028333 25.645 By matching By matching By matching By matching By MS/MS By matching 1 4434800 0 0 0 0 4434800 0 8376 816 8489 37625 24881 24881 1 VGDCVFIK HYNDMWLKVGDCVFIK VGDCVFIKSHGLVRPR K V G I K S 0 0 0 1 1 0 0 1 0 1 0 1 0 1 0 0 0 0 0 2 0 8 0 936.47389 Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;Q86U86-8;Q86U86;E7EVG2 Q86U86-5 1160 1167 PBRM1 Protein polybromo-1 yes no 2 0.029415 71.379 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4270400 0 908700 0 0 1178700 2182900 8377 1260 8490 37626;37627;37628 24882 24882 1 VGDFVATDLDTGRPSTTVR GNMGSNDKVGDFVATD GRPSTTVRYVMGNNPA K V G V R Y 1 2 0 3 0 0 0 2 0 0 1 0 0 1 1 1 4 0 0 3 0 19 1 2006.0069 Q02413 Q02413 404 422 DSG1 Desmoglein-1 yes yes 3 0.00048025 65.477 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 82072000 0 61593000 0 20479000 0 0 8378 1033 8491 37629;37630 24883;24884 24884 2 VGDGDLSAEEIPENEVSLR TMEEQKTKVGDGDLSA PENEVSLRRAVSKKKT K V G L R R 1 1 1 2 0 0 4 2 0 1 2 0 0 0 1 2 0 0 0 2 0 19 0 2027.9647 Q14684-2;Q14684 Q14684-2 221 239 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 2 6.9655E-295 174.59 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 41114000 0 28680000 0 9253700 3180500 0 8379 1111 8492 37631;37632;37633 24885;24886;24887 24887 3 VGDGDLSAEEIPENEVSLRR TMEEQKTKVGDGDLSA ENEVSLRRAVSKKKTA K V G R R A 1 2 1 2 0 0 4 2 0 1 2 0 0 0 1 2 0 0 0 2 0 20 1 2184.0659 Q14684-2;Q14684 Q14684-2 221 240 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 3 1.9592E-101 135.57 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 2 410300000 82842000 238380000 63237000 0 25839000 0 8380 1111 8493 37634;37635;37636;37637;37638 24888;24889;24890;24891 24888 4 VGDGDLSAEEIPENEVSLRRAVSK TMEEQKTKVGDGDLSA SLRRAVSKKKTALGKN K V G S K K 2 2 1 2 0 0 4 2 0 1 2 1 0 0 1 3 0 0 0 3 0 24 2 2569.2984 Q14684-2;Q14684 Q14684-2 221 244 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 3;4 3.58E-30 97.713 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 2 2 172650000 46574000 29749000 0 79602000 16729000 0 8381 1111 8494 37639;37640;37641;37642;37643;37644 24892;24893;24894;24895;24896 24895 5 VGDPQELNGITR EAHGTGTKVGDPQELN QELNGITRALCATRQE K V G T R A 0 1 1 1 0 1 1 2 0 1 1 0 0 0 1 0 1 0 0 1 0 12 0 1297.6626 P49327 P49327 299 310 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 2 0.022435 50.897 By matching By matching By matching By matching By matching By MS/MS 1 1 6362400 0 0 931680 0 0 5430700 8382 934 8495 37645;37646 24897 24897 1 VGDVTPQVKGGALPPAK KAAPAPGKVGDVTPQV GGALPPAKRAKKPEEE K V G A K R 2 0 0 1 0 1 0 3 0 0 1 2 0 0 3 0 1 0 0 3 0 17 1 1632.9199 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9 Q13428-3 245 261 TCOF1 Treacle protein no no 3 1.0127E-11 95.854 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 3 3 4 3 3 23694000 9015000 1505900 3228700 2188400 7755900 0 8383 1082;383 8496 37647;37648;37649;37650;37651;37652;37653;37654;37655;37656;37657;37658;37659;37660;37661;37662 24898;24899;24900;24901;24902;24903;24904;24905;24906;24907 24902 9 VGDYGSLSGREK IRNYTLWRVGDYGSLS GSLSGREKMMAEIYAN R V G E K M 0 1 0 1 0 0 1 3 0 0 1 1 0 0 0 2 0 0 1 1 0 12 1 1266.6204 Q9UBR2 Q9UBR2 190 201 CTSZ Cathepsin Z yes yes 3 0.003951 67.252 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3260700 0 435070 1129300 0 363090 1333200 8384 1584 8497 37663;37664;37665;37666 24908 24908 1 VGDYVYFENSSSNPYLVRR ________________ SNPYLVRRIEELNKTA R V G R R I 0 2 2 1 0 0 1 1 0 0 1 0 0 1 1 3 0 0 3 3 0 19 1 2264.0862 O94776 O94776 8 26 MTA2 Metastasis-associated protein MTA2 yes yes 3 1.5526E-26 102.65 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 84098000 0 33337000 0 0 0 50761000 8385 754 8498 37667;37668 24909;24910 24910 2 VGEAPGLQQPQPR ________________ GLQQPQPRGIRGSSAA R V G P R G 1 1 0 0 0 3 1 2 0 0 1 0 0 0 3 0 0 0 0 1 0 13 0 1375.7208 P42684-7;P42684-5;P42684-6;P42684;P42684-8 P42684-7 8 20 ABL2 Abelson tyrosine-protein kinase 2 yes no 2 0.0076211 58.04 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2566100 0 721610 687350 0 0 1157100 8386 916 8499 37669;37670;37671 24911 24911 1 VGEDEEQMMIK DVAMELERVGEDEEQM DEEQMMIKRSSECNPL R V G I K R 0 0 0 1 0 1 3 1 0 1 0 1 2 0 0 0 0 0 0 1 0 11 0 1307.5737 O95243-2 O95243-2 46 56 MBD4 Methyl-CpG-binding domain protein 4 no no 2 0.0030558 84.507 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 2 1 1 1 1 1 14413000 1434800 1711900 1517400 1670100 2813600 5265200 8387 769 8500 37672;37673;37674;37675;37676;37677;37678 24912;24913;24914;24915 24914 4 VGEDEEQMMIKR DVAMELERVGEDEEQM EEQMMIKRSSECNPLL R V G K R S 0 1 0 1 0 1 3 1 0 1 0 1 2 0 0 0 0 0 0 1 0 12 1 1463.6748 O95243-2 O95243-2 46 57 MBD4 Methyl-CpG-binding domain protein 4 no no 3 0.028555 60.691 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2022900 718990 0 0 662240 0 641690 8388 769 8501 37679;37680;37681 24916 24916 0 VGESSEQVSEEK QASSLGQKVGESSEQV SEQVSEEKTNEA____ K V G E K T 0 0 0 0 0 1 4 1 0 0 0 1 0 0 0 3 0 0 0 2 0 12 0 1306.5889 F5H4I8;E9PCM7;F5H2R1;P37275;Q2KJ05;F5H8J0;F5H838;Q5VZ84;G3V1R3 F5H4I8 1042 1053 ZEB1 Zinc finger E-box-binding homeobox 1 yes no 2 0.0019405 89.43 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 2689500 0 0 1525200 233410 363950 567030 8389 415 8502 37682;37683;37684;37685 24917 24917 1 VGEVIVTK VQPHDLGKVGEVIVTK VGEVIVTKDDAMLLKG K V G T K D 0 0 0 0 0 0 1 1 0 1 0 1 0 0 0 0 1 0 0 3 0 8 0 843.50657 P10809;F5GWR2 P10809 345 352 HSPD1 60 kDa heat shock protein, mitochondrial yes no 2 0.0061452 96.668 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 7292400 899530 1326200 0 612400 1526000 2928300 8390 820 8503 37686;37687;37688;37689;37690 24918;24919 24918 2 VGGHAAEYGAEALER NVKAAWGKVGGHAAEY YGAEALERMFLSFPTT K V G E R M 4 1 0 0 0 0 3 3 1 0 1 0 0 0 0 0 0 0 1 1 0 15 0 1528.727 CON__P01966 CON__P01966 18 32 yes yes 3 0.00065481 78.505 By MS/MS By matching By matching By MS/MS By MS/MS By matching 2 1 1 1 3586200 1543200 0 0 500300 870480 672270 + 8391 285 8504 37691;37692;37693;37694;37695 24920;24921;24922 24921 3 VGGNIEVLGFNARQRK PLPPLLARVGGNIEVL GFNARQRKAFLNAIMR R V G R K A 1 2 2 0 0 1 1 3 0 1 1 1 0 1 0 0 0 0 0 2 0 16 2 1756.9696 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1381 1396 CHD4 Chromodomain-helicase-DNA-binding protein 4 no no 4 0.0018676 68.171 By matching By matching By MS/MS By matching By matching By matching 1 7536400 0 0 7536400 0 0 0 8392 486 8505 37696 24923 24923 1 VGGRWFPAVCAHSK PKFVYQAKVGGRWFPA PAVCAHSKKQGKQEAA K V G S K K 2 1 0 0 1 0 0 2 1 0 0 1 0 1 1 1 0 1 0 2 0 14 1 1570.7827 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 764 777 ADAR Double-stranded RNA-specific adenosine deaminase no no 3 6.6283E-20 108.23 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 2 2 162050000 0 0 25616000 15313000 44185000 76940000 8393 352;968 8506 37697;37698;37699;37700;37701;37702 24924;24925 24924 2 VGGSQPPFQGQR PLPPPGQKVGGSQPPF QPPFQGQREPGPHALG K V G Q R E 0 1 0 0 0 3 0 3 0 0 0 0 0 1 2 1 0 0 0 1 0 12 0 1256.6262 Q9BTC0 Q9BTC0 1743 1754 DIDO1 Death-inducer obliterator 1 yes yes 2 0.0033303 70.728 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1865600 0 585600 470750 0 0 809250 8394 1447 8507 37703;37704;37705 24926;24927 24926 2 VGGTSDVEVNEK SDGVAVLKVGGTSDVE SDVEVNEKKDRVTDAL K V G E K K 0 0 1 1 0 0 2 2 0 0 0 1 0 0 0 1 1 0 0 3 0 12 0 1232.5885 P10809 P10809 406 417 HSPD1 60 kDa heat shock protein, mitochondrial yes yes 2 4.0518E-80 148.13 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 4663100 1071200 0 0 820320 0 2771600 8395 820 8508 37706;37707;37708 24928;24929;24930 24929 3 VGGVLCTEEK PSKAPAEKVGGVLCTE GVLCTEEKRNFAKPSP K V G E K R 0 0 0 0 1 0 2 2 0 0 1 1 0 0 0 0 1 0 0 2 0 10 0 1090.5329 Q9NPG3-2;Q9NPG3 Q9NPG3-2 706 715 UBN1 Ubinuclein-1 yes no 2 0.010869 72.2 By matching By matching By MS/MS By matching By matching By matching 1 1 1354900 0 0 1122200 0 232660 0 8396 1528 8509 37709;37710 24931 24931 1 VGHVTERTDASSASSFLDSDELER ELAGRPMKVGHVTERT LDSDELERTGIDLGTT K V G E R T 2 2 0 3 0 0 3 1 1 0 2 0 0 1 0 5 2 0 0 2 0 24 1 2607.2049 H0Y4X3;E1P5S2;G3XAC6;Q14498-3;Q14498-2;Q14498 H0Y4X3 174 197 RBM39 RNA-binding protein 39 yes no 3;4 1.2354E-231 156.58 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 2 1 1 1 78455000 16303000 38200000 4112200 8461500 0 11378000 8397 334 8510 37711;37712;37713;37714;37715;37716 24932;24933;24934;24935;24936;24937;24938 24936 7 VGILQSEDKQLQPSVSK VSESNDQKVGILQSED QLQPSVSKKSEGELSR K V G S K K 0 0 0 1 0 3 1 1 0 1 2 2 0 0 1 3 0 0 0 2 0 17 1 1855.0051 Q49AG3;E9PJ57;E9PM71 Q49AG3 65 81 ZBED5 Zinc finger BED domain-containing protein 5 yes no 3 1.2659E-90 133.23 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 14640000 2737100 3147000 5297300 794690 0 2664300 8398 1170 8511 37717;37718;37719;37720;37721 24939;24940;24941;24942 24939 4 VGINYQPPTVVPGGDLAK DWCPTGFKVGINYQPP VPGGDLAKVQRAVCML K V G A K V 1 0 1 1 0 1 0 3 0 1 1 1 0 0 3 0 1 0 1 3 0 18 0 1823.9781 G3V1U9;Q9BQE3;Q71U36;P68363;F5H5D3;F8VXZ4;Q6PEY2;Q13748;E9PGK3;Q13748-2;Q9NY65-2;Q9NY65;C9J2C0;F8VWX4;E7ET24;A8MUB1;P68366 G3V1U9 318 335 TUBA1A;TUBA1C;TUBA1B;TUBA3E;TUBA3C;TUBA8;TUBA4A Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-3E chain;Tubulin alpha-3C/D chain;Tubulin alpha-8 chain;Tubulin alpha-4A chain no no 2 0.0059751 45.876 By matching By MS/MS By matching By matching By matching By matching 1 1 1 191360000 0 161750000 0 29265000 0 337580 8399 518;44 8512 37722;37723;37724 24943 24943 1 VGINYWLAHK CVKKILDKVGINYWLA INYWLAHKALCSEKLD K V G H K A 1 0 1 0 0 0 0 1 1 1 1 1 0 0 0 0 0 1 1 1 0 10 0 1199.6451 CON__P00711 CON__P00711 99 108 yes yes 3 0.017107 63.184 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 31730000 0 8493600 0 0 0 23237000 + 8400 283 8513 37725;37726 24944;24945 24944 2 VGINYWLAHKALCSEK CVKKILDKVGINYWLA HKALCSEKLDQWLCEK K V G E K L 2 0 1 0 1 0 1 1 1 1 2 2 0 0 0 1 0 1 1 1 0 16 1 1887.9665 CON__P00711 CON__P00711 99 114 yes yes 3 9.9614E-07 89.466 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 28697000 0 0 0 12040000 0 16657000 + 8401 283 8514 37727;37728 24946;24947 24946 2 VGIQQGLLSQSTR GVGGVRSRVGIQQGLL GLLSQSTRTATFQQRF R V G T R T 0 1 0 0 0 3 0 2 0 1 2 0 0 0 0 2 1 0 0 1 0 13 0 1385.7627 Q9BY77;Q9BY77-2;F8WCX5;B4DSH9;Q6R954;F8WEE2 Q9BY77 34 46 POLDIP3;PDIP46 Polymerase delta-interacting protein 3 yes no 2 0.00074044 92.151 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 26852000 13990000 3746600 0 1638300 0 7477200 8402 1465 8515 37729;37730;37731;37732 24948;24949;24950 24948 3 VGIRETPENLAK RADLINKKVGIRETPE ETPENLAKLLTRMYLK K V G A K L 1 1 1 0 0 0 2 1 0 1 1 1 0 0 1 0 1 0 0 1 0 12 1 1325.7303 Q9NSD9;F5H6Y1 Q9NSD9 318 329 FARSB Phenylalanine--tRNA ligase beta subunit yes no 3 0.0065773 62.799 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 16377000 1592800 3620600 1836700 1252600 3870600 4203700 8403 1543 8516 37733;37734;37735;37736;37737;37738 24951;24952;24953 24953 3 VGLSEMAQK MAGFPGGKVGLSEMAQ GLSEMAQKNVGVRPGD K V G Q K N 1 0 0 0 0 1 1 1 0 0 1 1 1 0 0 1 0 0 0 1 0 9 0 961.49027 Q8NB90;Q8NB90-3;Q8NB90-2 Q8NB90 111 119 SPATA5 Spermatogenesis-associated protein 5 yes no 2 0.0070209 96.668 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 6103500 0 0 1194600 635200 1529900 2743800 8404 1315 8517 37739;37740;37741;37742 24954 24954 1 VGLVIGRGGETIK EILIPASKVGLVIGRG GRGGETIKQLQERTGV K V G I K Q 0 1 0 0 0 0 1 4 0 2 1 1 0 0 0 0 1 0 0 2 0 13 1 1297.7718 Q96I24;A6NJ37;Q96I24-2 Q96I24 174 186 FUBP3 Far upstream element-binding protein 3 yes no 2;3 1.6757E-46 129.34 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 2 2 1 3 2 84359000 4994800 13908000 8278500 3520200 12917000 40741000 8405 1394 8518 37743;37744;37745;37746;37747;37748;37749;37750;37751;37752;37753 24955;24956;24957;24958;24959;24960;24961;24962;24963 24959 9 VGLVIGRGGETIKQLQER EILIPASKVGLVIGRG TIKQLQERTGVKMVMI K V G E R T 0 2 0 0 0 2 2 4 0 2 2 1 0 0 0 0 1 0 0 2 0 18 2 1952.1167 Q96I24;A6NJ37;Q96I24-2 Q96I24 174 191 FUBP3 Far upstream element-binding protein 3 yes no 3;4 2.0635E-91 136.34 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 1 2 156950000 16033000 20510000 41491000 23984000 5315500 49619000 8406 1394 8519 37754;37755;37756;37757;37758;37759;37760;37761;37762 24964;24965;24966;24967;24968;24969;24970;24971;24972;24973 24973 10 VGNESLNRAVAK LNTRRMNRVGNESLNR SLNRAVAKAAETIIDT R V G A K A 2 1 2 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 0 2 0 12 1 1256.6837 Q9GZS1-2;Q9GZS1;E7EX70 Q9GZS1-2 159 170 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes no 3 0.0030242 72.434 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 5387000 1387200 573870 0 0 1553400 1872600 8407 1475 8520 37763;37764;37765;37766 24974;24975;24976;24977 24977 4 VGPADDGPAPSGEEEGEGGGEAGGKEPAADAAPGPSAAFR MNTADQARVGPADDGP PGPSAAFRLMVTRREP R V G F R L 9 1 0 3 0 0 6 10 0 0 0 1 0 1 6 2 0 0 0 1 0 40 1 3633.6092 Q9UKN8;F2Z356 Q9UKN8 9 48 GTF3C4 General transcription factor 3C polypeptide 4 yes no 3 0.0013988 22.585 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 13772000 5337200 0 6045100 0 2389900 0 8408 1602 8521 37767;37768;37769 24978;24979;24980 24980 3 VGPATPSAQVGK AGPVPPGKVGPATPSA TPSAQVGKWEEDSESS K V G G K W 2 0 0 0 0 1 0 2 0 0 0 1 0 0 2 1 1 0 0 2 0 12 0 1110.6033 Q13428-7;E7ETY2;Q13428-6;Q13428-5;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 529 540 TCOF1 Treacle protein no no 2 0.010971 58.172 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 11347000 0 2023500 473370 869870 5148400 2831400 8409 1082;383 8522 37770;37771;37772;37773;37774 24981;24982 24982 2 VGPGPTAAAAVEER ________________ AAAAVEERQRKLQEYL M V G E R Q 4 1 0 0 0 0 2 2 0 0 0 0 0 0 2 0 1 0 0 2 0 14 0 1323.6783 F8WBE0;Q8IYA6 F8WBE0 2 15 CKAP2L Cytoskeleton-associated protein 2-like yes no 2 0.0028132 62.081 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 7018700 424440 1241100 693390 860760 1674500 2124600 8410 567 8523 37775;37776;37777;37778;37779;37780 24983;24984 24984 2 VGPSNQPSTSAR PKVKKAPRVGPSNQPS NQPSTSARARLIDPGF R V G A R A 1 1 1 0 0 1 0 1 0 0 0 0 0 0 2 3 1 0 0 1 0 12 0 1199.5895 Q96PU4;Q96PU4-2;B1AL33 Q96PU4 105 116 UHRF2 E3 ubiquitin-protein ligase UHRF2 yes no 2 0.00063323 93.839 By matching By matching By matching By matching By matching By MS/MS 1 1 942680 0 0 0 0 282840 659840 8411 1411 8524 37781;37782 24985 24985 1 VGQALLQGNTER LRELKLSKVGQALLQG LLQGNTERTVWQYHFR K V G E R T 1 1 1 0 0 2 1 2 0 0 2 0 0 0 0 0 1 0 0 1 0 12 0 1284.6786 Q06124 Q06124 406 417 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 2 0.023634 71.888 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1623600 0 387710 0 316580 0 919310 8412 1040 8525 37783;37784;37785 24986 24986 0 VGREGIIPANYVQK NWYKAKNKVGREGIIP IPANYVQKREGVKAGT K V G Q K R 1 1 1 0 0 1 1 2 0 2 0 1 0 0 1 0 0 0 1 2 0 14 1 1542.8518 P41240;E7EQW6;H3BUM9 P41240 54 67 CSK Tyrosine-protein kinase CSK yes no 3 0.0017705 67.519 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 22222000 0 0 5544400 1348500 4905200 10424000 8413 912 8526 37786;37787;37788;37789 24987;24988 24987 2 VGRHVDAMNEYNK KIGVDYFKVGRHVDAM DAMNEYNKALEIDKQN K V G N K A 1 1 2 1 0 0 1 1 1 0 0 1 1 0 0 0 0 0 1 2 0 13 1 1531.7202 G5E9X0;Q96N46-2;Q96N46 G5E9X0 320 332 TTC14 Tetratricopeptide repeat protein 14 yes no 3 0.0015473 75.102 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2141700 0 0 619890 224870 405540 891430 8414 599 8527 37790;37791;37792;37793 24989;24990;24991;24992;24993 24992 5 VGRITTTEDFK PYRKPDCKVGRITTTE ITTTEDFKHLARKLTH K V G F K H 0 1 0 1 0 0 1 1 0 1 0 1 0 1 0 0 3 0 0 1 0 11 1 1265.6616 Q9BYW2;F2Z317 Q9BYW2 2496 2506 SETD2 Histone-lysine N-methyltransferase SETD2 yes no 3 0.015226 59.198 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 4026100 477050 827780 0 335490 663150 1722600 8415 479 8528 37794;37795;37796;37797;37798 24994 24994 1 VGRVSIYDSK PFIVNHPKVGRVSIYD RVSIYDSKRQSGKTKE K V G S K R 0 1 0 1 0 0 0 1 0 1 0 1 0 0 0 2 0 0 1 2 0 10 1 1122.6033 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 1106 1115 ADAR Double-stranded RNA-specific adenosine deaminase no no 2 0.00017172 107.11 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 59686000 6490800 0 18006000 389310 34800000 0 8416 352;968 8529 37799;37800;37801;37802 24995;24996 24995 2 VGRVSIYDSKR PFIVNHPKVGRVSIYD VSIYDSKRQSGKTKET K V G K R Q 0 2 0 1 0 0 0 1 0 1 0 1 0 0 0 2 0 0 1 2 0 11 2 1278.7044 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 1106 1116 ADAR Double-stranded RNA-specific adenosine deaminase no no 3 0.014558 75.819 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 8543900 0 1296500 1926700 1473700 1624600 2222500 8417 352;968 8530 37803;37804;37805;37806;37807 24997;24998;24999 24999 3 VGSHEQPSGATLQR SPTSDWSKVGSHEQPS PSGATLQRRKDRVELL K V G Q R R 1 1 0 0 0 2 1 2 1 0 1 0 0 0 1 2 1 0 0 1 0 14 0 1465.7274 Q765P7 Q765P7 381 394 MTSS1L MTSS1-like protein yes yes 3 0.0054505 54.09 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 3447800 568820 687370 525630 680360 985610 0 8418 1242 8531 37808;37809;37810;37811;37812 25000 25000 1 VGSLDNVGHLPAGGAVK FKEKAQAKVGSLDNVG LPAGGAVKTEGGGSEA K V G V K T 2 0 1 1 0 0 0 4 1 0 2 1 0 0 1 1 0 0 0 3 0 17 0 1589.8526 E7EVA0;P27816-6;P27816;P27816-2;P27816-4;E9PGM5;P27816-5;B9ZVR1;H0Y2V1;B4DSQ1;F8W9U4;H7C4C5 E7EVA0 2216 2232 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 yes no 2;3 5.8909E-110 139.21 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 1 2 1 4 71191000 10628000 9205000 12244000 4747800 0 34366000 8419 388 8532 37813;37814;37815;37816;37817;37818;37819;37820;37821;37822;37823;37824 25001;25002;25003;25004;25005;25006;25007;25008;25009;25010 25010 10 VGSPATVTFQQNK TKMVLTTKVGSPATVT TVTFQQNKNFHQTFAT K V G N K N 1 0 1 0 0 2 0 1 0 0 0 1 0 1 1 1 2 0 0 2 0 13 0 1375.7096 Q12830-4;Q12830-2;Q12830 Q12830-4 2096 2108 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 2.1196E-35 124.48 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 9881000 675380 2272000 1625400 1038500 1302600 2967100 8420 1061 8533 37825;37826;37827;37828;37829;37830 25011;25012;25013;25014;25015;25016;25017;25018 25018 8 VGSSSSESCAQDLPVLVGEEGEVKK ANYDTEERVGSSSSES GEEGEVKKLENTGIEA R V G K K L 1 0 0 1 1 1 4 3 0 0 2 2 0 0 1 5 0 0 0 4 0 25 1 2590.2432 Q99590-2;F8VXG7;Q99590;F8W028 Q99590-2 155 179 SCAF11 Protein SCAF11 yes no 3 9.2302E-65 109.84 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 33523000 0 18289000 0 0 2071100 13163000 8421 547 8534 37831;37832;37833 25019;25020;25021;25022 25020 4 VGSVLQEGCGK QNHAAVFRVGSVLQEG VLQEGCGKISKLYGDL R V G G K I 0 0 0 0 1 1 1 3 0 0 1 1 0 0 0 1 0 0 0 2 0 11 0 1132.5547 E9PBJ5;P31040;E9PEF8 E9PBJ5 480 490 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 2 7.0993E-42 133.89 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 5155500 439410 403470 560150 0 1187400 2565100 8422 407 8535 37834;37835;37836;37837;37838 25023;25024;25025;25026 25024 4 VGTIDDDPEYRK KTKKRDTKVGTIDDDP DDDPEYRKFLESYATD K V G R K F 0 1 0 3 0 0 1 1 0 1 0 1 0 0 1 0 1 0 1 1 0 12 1 1406.6678 Q0VAK7;Q9BZI7-2;Q9BZI7 Q0VAK7 151 162 UPF3B Regulator of nonsense transcripts 3B yes no 3 0.00092332 80.245 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 12289000 2470300 1396500 2187000 1728300 1934800 2572200 8423 1055 8536 37839;37840;37841;37842;37843;37844;37845 25027;25028;25029;25030;25031 25028 5 VGTQFIR LDKVADSKVGTQFIRG KVGTQFIRGVSGGERK K V G I R G 0 1 0 0 0 1 0 1 0 1 0 0 0 1 0 0 1 0 0 1 0 7 0 819.46029 Q9UNQ0-2;Q9UNQ0 Q9UNQ0-2 178 184 ABCG2 ATP-binding cassette sub-family G member 2 yes no 2 0.040637 79.116 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 7607000 575340 550140 1438500 851400 1749800 2441800 8424 1616 8537 37846;37847;37848;37849;37850;37851 25032 25032 1 VGTQFIRGVSGGERK LDKVADSKVGTQFIRG GVSGGERKRTSIGMEL K V G R K R 0 2 0 0 0 1 1 4 0 1 0 1 0 1 0 1 1 0 0 2 0 15 2 1589.8638 Q9UNQ0-2;Q9UNQ0 Q9UNQ0-2 178 192 ABCG2 ATP-binding cassette sub-family G member 2 yes no 3 0.032681 46.88 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 13462000 0 0 2725900 2427600 3060500 5248300 8425 1616 8538 37852;37853;37854;37855 25033 25033 1 VGVEAKQPNSAIRK AKGIVLEKVGVEAKQP QPNSAIRKCVRVQLIK K V G R K C 2 1 1 0 0 1 1 1 0 1 0 2 0 0 1 1 0 0 0 2 0 14 2 1495.8471 D6RD47;P62266;D6RIX0;D6R9I7 D6RD47 55 68 RPS23 40S ribosomal protein S23 yes no 3 0.01313 58.04 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1491100 378290 0 0 545910 566920 0 8426 325 8539 37856;37857;37858 25034 25034 1 VGVGHAGEWAR PAVVAAARVGVGHAGE GHAGEWARKPLRFYVR R V G A R K 2 1 0 0 0 0 1 3 1 0 0 0 0 0 0 0 0 1 0 2 0 11 0 1137.5679 G5E9E2;Q5J9I4;P29372-2;P29372 G5E9E2 245 255 MPG DNA-3-methyladenine glycosylase yes no 2 1.2459E-12 113.67 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 2 1 1 1 1 1 38353000 3662600 5675900 5061500 1951800 9794400 12207000 8427 594 8540 37859;37860;37861;37862;37863;37864;37865 25035;25036;25037;25038 25038 4 VGVGTCGIADKPMTQYQDTSK SPESVTGKVGVGTCGI TQYQDTSKYNVRHLMP K V G S K Y 1 0 0 2 1 2 0 3 0 1 0 2 1 0 1 1 3 0 1 2 0 21 1 2255.0562 O75940 O75940 209 229 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 3 2.3203E-06 79.88 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 9428800 0 2589500 1099000 775130 2677200 2288100 8428 751 8541 37866;37867;37868;37869;37870 25039;25040;25041;25042 25039 4 VGVKEELLAVGK QLKASLGKVGVKEELL EELLAVGKFTRTSGET K V G G K F 1 0 0 0 0 0 2 2 0 0 2 2 0 0 0 0 0 0 0 3 0 12 1 1240.7391 P46013;F5H4V4;P46013-2 P46013 1032 1043 MKI67 Antigen KI-67 no no 2;3 4.774E-193 176.99 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 419520000 129280000 22682000 165060000 21447000 53014000 28040000 8429 919;920 8542 37871;37872;37873;37874;37875;37876;37877;37878;37879;37880;37881;37882 25043;25044;25045;25046;25047;25048;25049;25050;25051;25052;25053;25054;25055 25046 13 VGVKEELLAVGKFTR QLKASLGKVGVKEELL LAVGKFTRTSGETTHT K V G T R T 1 1 0 0 0 0 2 2 0 0 2 2 0 1 0 0 1 0 0 3 0 15 2 1644.9563 P46013;F5H4V4;P46013-2 P46013 1032 1046 MKI67 Antigen KI-67 no no 4 1.5353E-08 97.767 By matching By matching By matching By MS/MS By matching By matching 1 9628100 0 0 0 9628100 0 0 8430 919;920 8543 37883 25056 25056 1 VGVKEELLAVGKLTQTSGETTHTHTEPTGDGK RLKTSLGKVGVKEELL TEPTGDGKSMKAFMES K V G G K S 1 0 0 1 0 1 4 5 2 0 3 3 0 0 1 1 7 0 0 3 0 32 2 3319.6896 P46013;F5H4V4;P46013-2 P46013 1640 1671 MKI67 Antigen KI-67 no no 5 5.889E-06 45.985 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 56429000 0 0 39345000 17084000 0 0 8431 919;920 8544 37884;37885 25057;25058 25057 2 VGVKEEVLPVGK RLKISLGKVGVKEEVL EEVLPVGKLTQTSGKT K V G G K L 0 0 0 0 0 0 2 2 0 0 1 2 0 0 1 0 0 0 0 4 0 12 1 1252.7391 P46013;F5H4V4;P46013-2 P46013 2006 2017 MKI67 Antigen KI-67 no no 2;3 4.8283E-06 104.81 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 3 4 2 499510000 39208000 118000000 96968000 37933000 72996000 134410000 8432 919;920 8545 37886;37887;37888;37889;37890;37891;37892;37893;37894;37895;37896;37897;37898;37899 25059;25060;25061;25062;25063;25064;25065;25066;25067;25068;25069 25064 10 VGVKEEVLPVGKLTQTSGK RLKISLGKVGVKEEVL KLTQTSGKTTQTHRET K V G G K T 0 0 0 0 0 1 2 3 0 0 2 3 0 0 1 1 2 0 0 4 0 19 2 1968.1255 P46013;F5H4V4;P46013-2 P46013 2006 2024 MKI67 Antigen KI-67 no no 3;4 6.0763E-81 125.59 By MS/MS By matching By MS/MS By MS/MS By matching By matching 2 1 1 1 1 160370000 100400000 4125600 48820000 5898100 0 1131900 8433 919;920 8546 37900;37901;37902;37903;37904;37905 25070;25071;25072;25073 25073 4 VGVLAASMEAK VEDAPIAKVGVLAASM LAASMEAKASSQQEKE K V G A K A 3 0 0 0 0 0 1 1 0 0 1 1 1 0 0 1 0 0 0 2 0 11 0 1074.5743 F8VQE1;Q9UHB6-2;B4DN52;Q9UHB6;Q9UHB6-4;F8VS07;Q9UHB6-3 F8VQE1 340 350 LIMA1 LIM domain and actin-binding protein 1 yes no 2 0.0092847 65.842 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 10807000 1361800 2057800 0 0 1633200 5754000 8434 107 8547 37906;37907;37908;37909 25074;25075 25074 2 VGVNGFGR ________________ VGVNGFGRIGRLVTRA K V G G R I 0 1 1 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 2 0 8 0 804.42424 P04406;E7EU54 P04406 6 13 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 6.939E-05 114.78 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 18126000 2843600 2033600 2038100 3409200 7801500 0 8435 791 8548 37910;37911;37912;37913;37914 25076;25077;25078 25077 3 VGYELKDEIERK FHESTEGKVGYELKDE LKDEIERKFDKWQEPP K V G R K F 0 1 0 1 0 0 3 1 0 1 1 2 0 0 0 0 0 0 1 1 0 12 2 1477.7777 Q8WWY3;Q8WWY3-2;E7ESA8;Q8WWY3-3 Q8WWY3 316 327 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes no 3 0.011793 67.879 By MS/MS By matching By matching By matching By matching By matching 1 1 1 6531700 3839100 0 0 0 1257100 1435500 8436 1342 8549 37915;37916;37917 25079 25079 1 VHAAADKHNSVEDSVTK EEIKMRIKVHAAADKH SVEDSVTKSREHKEKH K V H T K S 3 0 1 2 0 0 1 0 2 0 0 2 0 0 0 2 1 0 0 3 0 17 1 1806.886 O60563 O60563 486 502 CCNT1 Cyclin-T1 yes yes 3;4 0.0018133 57.788 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 2 1 1 1 2 6189700 599000 1229600 239870 407050 666800 3047300 8437 732 8550 37918;37919;37920;37921;37922;37923;37924;37925 25080;25081;25082;25083 25082 4 VHELNEEIGK EVAAKAERVHELNEEI ELNEEIGKLLAKVEQL R V H G K L 0 0 1 0 0 0 3 1 1 1 1 1 0 0 0 0 0 0 0 1 0 10 0 1166.5932 B7Z500;Q9Y383-2;Q9Y383;B7Z4Q3 B7Z500 123 132 LUC7L2;C7orf55 Putative RNA-binding protein Luc7-like 2;UPF0562 protein C7orf55 no no 2 0.015835 67.207 By matching By matching By matching By matching By matching By MS/MS 1 1 2365700 0 446490 0 0 0 1919300 8438 186 8551 37926;37927 25084 25084 1 VHIPNDDAQFDASHCDSDK QNHLVVARVHIPNDDA ASHCDSDKGEFGGFGS R V H D K G 2 0 1 5 1 1 0 0 2 1 0 1 0 1 1 2 0 0 0 1 0 19 0 2169.9022 Q16576;E9PC52;Q16576-2;Q5JP01;C9J7L0 Q16576 83 101 RBBP7 Histone-binding protein RBBP7 yes no 3;4 2.393E-26 102.84 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 3 32904000 0 13360000 6959500 0 0 12584000 8439 1153 8552 37928;37929;37930;37931;37932;37933;37934 25085;25086;25087;25088;25089;25090;25091 25086 4 VHIPNDDAQFDASHCDSDKGEFGGFGSVTGK QNHLVVARVHIPNDDA GFGSVTGKIECEIKIN R V H G K I 2 0 1 5 1 1 1 5 2 1 0 2 0 3 1 3 1 0 0 2 0 31 1 3293.432 Q16576;Q16576-2;Q5JP01 Q16576 83 113 RBBP7 Histone-binding protein RBBP7 yes no 4;5 7.941E-90 108.19 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 1 1 2 402870000 5402200 22724000 77998000 40265000 1810500 254670000 8440 1153 8553 37935;37936;37937;37938;37939;37940;37941;37942 25092;25093;25094;25095;25096;25097;25098;25099;25100 25094 9 VHKECCHGDLLECADDR KLVTDLTKVHKECCHG LLECADDRADLAKYIC K V H D R A 1 1 0 3 3 0 2 1 2 0 2 1 0 0 0 0 0 0 0 1 0 17 1 2112.8775 CON__P02769 CON__P02769 264 280 yes yes 3;4 0.0020961 64.52 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 1 1 9502000 0 2362700 1668100 1330300 1559500 2581400 + 8441 294 8554 37943;37944;37945;37946;37947;37948;37949;37950 25101;25102;25103;25104;25105;25106;25107;25108 25102 8 VHKECCHGDLLECADDRADLAK KLVTDLTKVHKECCHG DDRADLAKYICDNQDT K V H A K Y 3 1 0 4 3 0 2 1 2 0 3 2 0 0 0 0 0 0 0 1 0 22 2 2611.1577 CON__P02769 CON__P02769 264 285 yes yes 3;4;5 2.2705E-33 102.84 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 3 2 727980000 0 46372000 151650000 124890000 135710000 269350000 + 8442 294 8555 37951;37952;37953;37954;37955;37956;37957;37958;37959;37960 25109;25110;25111;25112;25113;25114;25115;25116;25117;25118 25111 10 VHLPTQPAADTYSEFHK PSPRPSPRVHLPTQPA DTYSEFHKHYARISTS R V H H K H 2 0 0 1 0 1 1 0 2 0 1 1 0 1 2 1 2 0 1 1 0 17 0 1939.9428 Q6W2J9;Q6W2J9-4;Q6W2J9-2;H7BYY2;Q6W2J9-3 Q6W2J9 343 359 BCOR BCL-6 corepressor yes no 3 6.9715E-08 92.38 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 8120200 3436900 0 1972500 0 613940 2096800 8443 1237 8556 37961;37962;37963;37964;37965 25119;25120;25121;25122 25120 4 VHPAMATAAGGCR YHHERWHRVHPAMATA ATAAGGCRSFSRSPSD R V H C R S 4 1 0 0 1 0 0 2 1 0 0 0 1 0 1 0 1 0 0 1 0 13 0 1297.602 H7C561;H7C0N4 H7C561 259 271 SF1 no no 3 0.00094644 80.69 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 9461100 933880 1000300 978100 828110 2177700 3543100 8444 674;664 8557 37966;37967;37968;37969;37970;37971 25123;25124;25125;25126;25127 25124 5 VHSQGPHHVCELCNK AYISDHMKVHSQGPHH HVCELCNKGTGEVCPM K V H N K G 0 0 1 0 2 1 1 1 3 0 1 1 0 0 1 1 0 0 0 2 0 15 0 1800.8148 C6G496;P56270;G5E927;I3L2Z5;F5H7A6;H3BQI4;H3BQS2;H3BQD6;I3L411;H3BPU3;I3L4Y2;I3L0M3;I3L0V8 C6G496 389 403 MAZ Myc-associated zinc finger protein yes no 4 0.0010829 68.972 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 8966300 0 1423300 1395300 625180 2217400 3305100 8445 219 8558 37972;37973;37974;37975;37976 25128;25129;25130;25131 25129 4 VHTGEKPYECEECGK SALVIHQRVHTGEKPY YECEECGKVFSHSSNL R V H G K V 0 0 0 0 2 0 4 2 1 0 0 2 0 0 1 0 1 0 1 1 0 15 1 1821.7662 B7Z7H3;Q969J2;H7C1Y5;H7BY15 B7Z7H3 214 228 ZKSCAN4 Zinc finger protein with KRAB and SCAN domains 4 no no 3 0.0042889 54.812 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 7756200 857880 1051800 1146200 705510 1312400 2682400 8446 194 8559 37977;37978;37979;37980;37981;37982 25132 25132 1 VHTGQRPFSCGICGK SSLRSHQRVHTGQRPF FSCGICGKSFSQRSAL R V H G K S 0 1 0 0 2 1 0 3 1 1 0 1 0 1 1 1 1 0 0 1 0 15 1 1702.8032 H3BS42;Q9H5H4;B7Z2Y7 H3BS42 363 377 ZNF768 Zinc finger protein 768 yes no 3 0.005303 52.821 By MS/MS By matching By matching By matching By matching By MS/MS 2 1 1 1 1 1 9385700 1837200 707280 1524300 1309200 2238500 1769300 8447 646 8560 37983;37984;37985;37986;37987;37988;37989 25133;25134;25135 25135 3 VHVGDEDFVHLR AGTNYFIKVHVGDEDF DEDFVHLRVFQSLPHE K V H L R V 0 1 0 2 0 0 1 1 2 0 1 0 0 1 0 0 0 0 0 3 0 12 0 1421.7052 P04080 P04080 57 68 CSTB Cystatin-B yes yes 3 2.8131E-50 132.17 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 2 1 1 1 11793000 1862200 1755000 3327000 1159900 0 3689200 8448 786 8561 37990;37991;37992;37993;37994;37995;37996 25136;25137;25138 25137 3 VHVPARPYRVLNNFISNQK IGKAHTEKVHVPARPY NNFISNQKMDFKEDLS K V H Q K M 1 2 3 0 0 1 0 0 1 1 1 1 0 1 2 1 0 0 1 3 0 19 2 2251.2338 P46013;F5H4V4;P46013-2;E7EN66 P46013 727 745 MKI67 Antigen KI-67 no no 3 3.6343E-06 88.311 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 112020000 0 0 10347000 0 1485000 100190000 8449 919;920 8562 37997;37998;37999 25139;25140 25140 2 VIACFDSLKGR SCQVENGRVIACFDSL CFDSLKGRCSRENCKY R V I G R C 1 1 0 1 1 0 0 1 0 1 1 1 0 1 0 1 0 0 0 1 0 11 1 1264.6598 Q9NR56-3;Q9NR56-4;E9PBW7;Q9NR56-6;C9JP00;Q9NR56-2;Q9NR56-5;Q9NR56;H7C4T5;O95205;Q5VZF2-3;Q5VZF2-2;Q5VZF2;B4E3F7 Q9NR56-3 50 60 MBNL1;MBLL;MBNL2 Muscleblind-like protein 1;Muscleblind-like protein 2 no no 3 0.010338 64.73 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 10860000 1444600 318340 1188200 631340 2359800 4917700 8450 263;764 8563 38000;38001;38002;38003;38004;38005 25141;25142 25141 2 VIAGLYQR SSSEDSEKVIAGLYQR VIAGLYQRAFQHLSEA K V I Q R A 1 1 0 0 0 1 0 1 0 1 1 0 0 0 0 0 0 0 1 1 0 8 0 918.5287 P78527;E7EUY0;P78527-2 P78527 3373 3380 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.0077396 104.45 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 50716000 4299900 12848000 2691000 2903800 7836200 20137000 8451 1012 8564 38006;38007;38008;38009;38010;38011 25143;25144;25145;25146;25147;25148 25145 6 VIAPNPAQLQGQR PHMLMSQRVIAPNPAQ PAQLQGQRGPPKPGLV R V I Q R G 2 1 1 0 0 3 0 1 0 1 1 0 0 0 2 0 0 0 0 1 0 13 0 1390.7681 Q8WXI9 Q8WXI9 265 277 GATAD2B Transcriptional repressor p66-beta yes yes 2 1.555E-09 105.46 By matching By matching By matching By matching By matching By MS/MS 1 1 1 7593400 0 1854600 1526900 0 0 4211900 8452 1344 8565 38012;38013;38014 25149 25149 1 VIAPNPAQLQGQRGPPKPGLVR PHMLMSQRVIAPNPAQ PPKPGLVRTTTPNMNP R V I V R T 2 2 1 0 0 3 0 3 0 1 2 1 0 0 5 0 0 0 0 2 0 22 2 2292.3179 Q8WXI9 Q8WXI9 265 286 GATAD2B Transcriptional repressor p66-beta yes yes 3 0.038818 38.418 By matching By matching By matching By matching By matching By MS/MS 1 1844800 0 0 0 0 0 1844800 8453 1344 8566 38015 25150 25150 1 VIAQLSECEK QKETELNKVIAQLSEC AQLSECEKHKEKINED K V I E K H 1 0 0 0 1 1 2 0 0 1 1 1 0 0 0 1 0 0 0 1 0 10 0 1175.5856 Q92878-2;Q92878;Q92878-3 Q92878-2 989 998 RAD50 DNA repair protein RAD50 yes no 2 0.0086316 80.706 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 8598400 860640 1479100 797790 433230 1595000 3432700 8454 1362 8567 38016;38017;38018;38019;38020;38021 25151;25152;25153 25153 3 VIAQLSECEKHKEK QKETELNKVIAQLSEC ECEKHKEKINEDMRLM K V I E K I 1 0 0 0 1 1 3 0 1 1 1 3 0 0 0 1 0 0 0 1 0 14 2 1697.8771 Q92878-2;Q92878;Q92878-3 Q92878-2 989 1002 RAD50 DNA repair protein RAD50 yes no 3;4 0.00012727 92.856 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 2 1 14386000 0 4291500 1750700 1728800 2580400 4034900 8455 1362 8568 38022;38023;38024;38025;38026;38027;38028 25154;25155;25156;25157;25158;25159 25156 6 VIAQQVQLQQQQEQVR HMYPEKLKVIAQQVQL QQQQEQVRLLHQEKLE K V I V R L 1 1 0 0 0 8 1 0 0 1 1 0 0 0 0 0 0 0 0 3 0 16 0 1922.0334 Q01664 Q01664 190 205 TFAP4 Transcription factor AP-4 yes yes 2;3 0.0027041 55.975 By matching By MS/MS By matching By matching By matching By MS/MS 1 2 1 2 15882000 0 1682900 2082300 0 1760900 10356000 8456 1029 8569 38029;38030;38031;38032;38033;38034 25160;25161;25162 25160 2 VIAQQVQLQQQQEQVRLLHQEK HMYPEKLKVIAQQVQL VRLLHQEKLEREQQQL K V I E K L 1 1 0 0 0 9 2 0 1 1 3 1 0 0 0 0 0 0 0 3 0 22 1 2670.4565 Q01664 Q01664 190 211 TFAP4 Transcription factor AP-4 yes yes 3;4 2.5144E-23 98.882 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 1 1 290450000 0 43555000 36003000 0 18112000 192790000 8457 1029 8570 38035;38036;38037;38038;38039 25163;25164;25165;25166 25165 3 VICAEEPYICK PGPGLAIRVICAEEPY AEEPYICKDFPETNNI R V I C K D 1 0 0 0 2 0 2 0 0 2 0 1 0 0 1 0 0 0 1 1 0 11 0 1380.6418 F8W720;B4DUT7;P49915 F8W720 348 358 GMPS GMP synthase [glutamine-hydrolyzing] yes no 2 0.0040233 79.201 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 8124800 2240400 2833600 1910100 1140700 0 0 8458 129 8571 38040;38041;38042;38043 25167;25168;25169 25169 3 VICLGSLASK ELRNRSVKVICLGSLA CLGSLASKLSRKYVKA K V I S K L 1 0 0 0 1 0 0 1 0 1 2 1 0 0 0 2 0 0 0 1 0 10 0 1046.5794 Q9Y2M0-2;Q9Y2M0;H3BQ24 Q9Y2M0-2 149 158 FAN1 Fanconi-associated nuclease 1 yes no 2 0.0007944 105.4 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 39148000 16470000 3402400 0 2712700 0 16564000 8459 1634 8572 38044;38045;38046;38047 25170;25171 25171 2 VIDLTRNEATVETLTETK IGMRGKPKVIDLTRNE VETLTETKIHCETDEK K V I T K I 1 1 1 1 0 0 3 0 0 1 2 1 0 0 0 0 5 0 0 2 0 18 1 2032.0688 G3V529;Q9GZR7;F5H4J5;Q4V9L5;F5GYL3;F5H4V3 G3V529 507 524 DDX24 ATP-dependent RNA helicase DDX24 yes no 3 1.6261E-58 121.51 By matching By matching By matching By MS/MS By matching By matching 1 9969800 0 0 0 9969800 0 0 8460 588 8573 38048 25172 25172 1 VIDQEMQAIGGQK RAMEKLVRVIDQEMQA MQAIGGQKVNMPSLSP R V I Q K V 1 0 0 1 0 3 1 2 0 2 0 1 1 0 0 0 0 0 0 1 0 13 0 1415.7079 Q7L3T8 Q7L3T8 104 116 PARS2 Probable proline--tRNA ligase, mitochondrial yes yes 2 0.015794 51.135 By matching By matching By matching By matching By matching By MS/MS 1 2592200 0 0 0 0 0 2592200 8461 1245 8574 38049 25173 25173 1 VIEEEWQQVDR PFHESILKVIEEEWQQ EEWQQVDRQLPSLACK K V I D R Q 0 1 0 1 0 2 3 0 0 1 0 0 0 0 0 0 0 1 0 2 0 11 0 1429.6838 P42166 P42166 501 511 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 5.2963E-55 138.45 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 39786000 7732900 8699200 6058400 1568600 2726100 13001000 8462 913 8575 38050;38051;38052;38053;38054;38055 25174;25175;25176;25177;25178;25179 25175 6 VIENPAEAQSAALEEGHAWRK DFSGQTGRVIENPAEA EEGHAWRKRSTRMNIL R V I R K R 5 1 1 0 0 1 4 1 1 1 1 1 0 0 1 1 0 1 0 1 0 21 1 2305.1451 Q13322-3;Q13322-2;Q13322-4;Q13322 Q13322-3 386 406 GRB10 Growth factor receptor-bound protein 10 yes no 4 0.0089468 38.665 By matching By matching By matching By matching By matching By MS/MS 1 2878500 0 0 0 0 0 2878500 8463 1077 8576 38056 25180 25180 0 VIETPENDFK RVNCRREKVIETPEND ETPENDFKHHRSQNHS K V I F K H 0 0 1 1 0 0 2 0 0 1 0 1 0 1 1 0 1 0 0 1 0 10 0 1190.5819 F5H727;Q9H0G5;H7BYM1 F5H727 203 212 NSRP1 Nuclear speckle splicing regulatory protein 1 yes no 2 0.030044 57.347 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4105200 427950 0 0 719960 1551600 1405600 8464 526 8577 38057;38058;38059;38060 25181 25181 1 VIGANKNQEEEK DEPKFMSKVIGANKNQ NKNQEEEKSGKWEGLV K V I E K S 1 0 2 0 0 1 3 1 0 1 0 2 0 0 0 0 0 0 0 1 0 12 1 1357.6838 Q9Y2W1 Q9Y2W1 456 467 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 3 0.0049072 64.64 By matching By matching By MS/MS By matching By matching By matching 1 1087800 0 0 1087800 0 0 0 8465 1639 8578 38061 25182 25182 1 VIGNGSFGVVYQAK EVSYTDTKVIGNGSFG FGVVYQAKLCDSGELV K V I A K L 1 0 1 0 0 1 0 3 0 1 0 1 0 1 0 1 0 0 1 3 0 14 0 1437.7616 P49841;P49841-2 P49841 61 74 GSK3B Glycogen synthase kinase-3 beta yes no 2 3.0302E-55 128.21 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 22863000 0 18044000 0 4818700 0 0 8466 946 8579 38062;38063;38064 25183;25184;25185 25184 2 VIGQDSSEIHFKVK EGEYIKLKVIGQDSSE SEIHFKVKMTTHLKKL K V I V K M 0 0 0 1 0 1 1 1 1 2 0 2 0 1 0 2 0 0 0 2 0 14 1 1585.8464 B8ZZJ0;B9A032;P63165;B8ZZN6 B8ZZJ0 26 39 SUMO1 Small ubiquitin-related modifier 1 yes no 3 1.526E-12 101.39 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 8106200 1295900 2032900 1144200 823100 0 2810100 8467 213 8580 38065;38066;38067;38068;38069 25186;25187 25187 2 VIHSILNSPYAK VLLDLEPRVIHSILNS ILNSPYAKLYNPENIY R V I A K L 1 0 1 0 0 0 0 0 1 2 1 1 0 0 1 2 0 0 1 1 0 12 0 1340.7452 P23258;Q9NRH3 P23258 73 84 TUBG1;TUBG2 Tubulin gamma-1 chain;Tubulin gamma-2 chain yes no 2;3 0.0012803 90.793 By matching By matching By matching By matching By matching By MS/MS 1 1 2 2 12085000 0 2754100 900210 0 3291300 5139900 8468 866 8581 38070;38071;38072;38073;38074;38075 25188;25189 25189 2 VIKGESCSENLQVK MEESTERKVIKGESCS CSENLQVKLVSDGQEL K V I V K L 0 0 1 0 1 1 2 1 0 1 1 2 0 0 0 2 0 0 0 2 0 14 1 1589.8083 Q16600 Q16600 106 119 ZNF239 Zinc finger protein 239 yes yes 3 0.0011277 75.589 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 4700400 850190 786140 838250 0 777090 1448700 8469 1154 8582 38076;38077;38078;38079;38080 25190 25190 1 VILASPETSSAK PDGAGTGKVILASPET SPETSSAKQLIFTTSD K V I A K Q 2 0 0 0 0 0 1 0 0 1 1 1 0 0 1 3 1 0 0 1 0 12 0 1201.6554 C9JKS0;P49116;P49116-2 C9JKS0 83 94 NR2C2 Nuclear receptor subfamily 2 group C member 2 yes no 2 0.0025962 73.951 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 8922100 0 1633200 1177000 0 2637800 3474100 8470 256 8583 38081;38082;38083;38084 25191;25192;25193 25193 3 VILCQLEVYQK VDPNQYTKVILCQLEV CQLEVYQKSLKMAQRQ K V I Q K S 0 0 0 0 1 2 1 0 0 1 2 1 0 0 0 0 0 0 1 2 0 11 0 1391.7483 Q96RL1;F8VQY2;Q96RL1-3;F2Z2T8 Q96RL1 295 305 UIMC1 BRCA1-A complex subunit RAP80 yes no 2 1.0127E-86 152.67 By matching By MS/MS By matching By matching By matching By matching 1 33983000 0 33983000 0 0 0 0 8471 535 8584 38085 25194 25194 1 VILDYNTAHNK ELLEYYIKVILDYNTA DYNTAHNKVALSECYT K V I N K V 1 0 2 1 0 0 0 0 1 1 1 1 0 0 0 0 1 0 1 1 0 11 0 1286.6619 Q14258 Q14258 459 469 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 0.0024929 87.184 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 5189200 0 741460 517600 252920 1949100 1728200 8472 1105 8585 38086;38087;38088;38089;38090 25195;25196 25196 2 VILGAHNEKVR ILALSFYKVILGAHNE GAHNEKVREQSVQEIP K V I V R E 1 1 1 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 0 2 0 11 1 1234.7146 CON__P06868 CON__P06868 637 647 yes yes 3 0.0057815 71.221 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 2573500 0 336900 487970 333520 467460 947690 + 8473 295 8586 38091;38092;38093;38094;38095 25197;25198 25197 2 VIMPLGSK LLDGKQGKVIMPLGSK VIMPLGSKLTGVIVEN K V I S K L 0 0 0 0 0 0 0 1 0 1 1 1 1 0 1 1 0 0 0 1 0 8 0 843.48881 Q8NFC6 Q8NFC6 1382 1389 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 0.034579 69.812 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 4063600 616150 0 1218300 772550 1456600 0 8474 1325 8587 38096;38097;38098;38099 25199;25200 25199 2 VINAAHSFYNGTTTLPISDEDRTPRK KKLGIQVKVINAAHSF DEDRTPRKRISKTLNM K V I R K R 2 2 2 2 0 0 1 1 1 2 1 1 0 1 2 2 4 0 1 1 0 26 2 2902.4573 F8W720;B4DUT7;P49915 F8W720 197 222 GMPS GMP synthase [glutamine-hydrolyzing] yes no 4;5 1.3218E-79 114.78 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 87506000 24749000 0 0 14643000 0 48114000 8475 129 8588 38100;38101;38102 25201;25202;25203 25202 3 VINEEYKIWK FEDTVEERVINEEYKI NEEYKIWKKNTPFLYD R V I W K K 0 0 1 0 0 0 2 0 0 2 0 2 0 0 0 0 0 1 1 1 0 10 1 1320.7078 Q16576;E9PC52;Q16576-2;C9JAJ9;Q09028-3;Q09028;Q09028-2;E9PNS2;E9PIC4;E9PNS6 Q16576 15 24 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 no no 3 0.0089035 79.489 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 6964400 0 633410 4434500 0 0 1896500 8476 1153;1051 8589 38103;38104;38105 25204;25205 25204 2 VINLNDNTFTEK FAVNPLLRVINLNDNT NDNTFTEKGAVAMAET R V I E K G 0 0 3 1 0 0 1 0 0 1 1 1 0 1 0 0 2 0 0 1 0 12 0 1406.7042 P46060;F8W7I9;H0Y4Q3 P46060 240 251 RANGAP1 Ran GTPase-activating protein 1 yes no 2 7.8067E-12 107.65 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 22003000 0 3814000 0 1098000 2369600 14721000 8477 921 8590 38106;38107;38108;38109 25206;25207;25208;25209 25208 4 VIPELNGK GAAKAVGKVIPELNGK VIPELNGKLTGMAFRV K V I G K L 0 0 1 0 0 0 1 1 0 1 1 1 0 0 1 0 0 0 0 1 0 8 0 868.50182 P04406;E7EUT5;E7EUT4 P04406 220 227 GAPDH Glyceraldehyde-3-phosphate dehydrogenase yes no 2 0.0015751 111.65 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 30016000 3750700 3272000 4476700 4543000 9347100 4626200 8478 791 8591 38110;38111;38112;38113;38114;38115 25210;25211;25212;25213 25210 4 VIPRLTHELPGIK LLFSDGEKVIPRLTHE THELPGIKRGRQAEEE K V I I K R 0 1 0 0 0 0 1 1 1 2 2 1 0 0 2 0 1 0 0 1 0 13 1 1471.8875 H7C1J2;H7C1M5;Q9H147;F2Z2A4 H7C1J2 62 74 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 yes no 3 9.4018E-06 99.669 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 14698000 0 3918900 0 1841200 0 8937600 8479 667 8592 38116;38117;38118 25214;25215 25215 2 VIQAGMFDQK YKLNVDQKVIQAGMFD QAGMFDQKSSSHERRA K V I Q K S 1 0 0 1 0 2 0 1 0 1 0 1 1 1 0 0 0 0 0 1 0 10 0 1135.5696 P51531-2;P51531;P51532-5;P51532-2;P51532-3;P51532-4;P51532;Q9HBD4;F5H0X5 P51532-5 1228 1237 SMARCA2;SMARCA4 Probable global transcription activator SNF2L2;Transcription activator BRG1 no no 2 5.1129E-05 108.47 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 23208000 1259500 3792400 2631700 1760200 3990200 9774400 8480 952;951 8593 38119;38120;38121;38122;38123;38124 25216;25217;25218 25217 3 VIQENEHALQK RNLLQELKVIQENEHA ENEHALQKDALSIKLK K V I Q K D 1 0 1 0 0 2 2 0 1 1 1 1 0 0 0 0 0 0 0 1 0 11 0 1307.6834 E9PD53;Q9NTJ3;F5H0U7 E9PD53 974 984 SMC4 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 4 yes no 2;3 9.3508E-13 115 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 1 1 1903100 0 310400 360070 0 365740 866910 8481 419 8594 38125;38126;38127;38128;38129 25219;25220 25219 2 VIQIATSSSTAK LPKNLLAKVIQIATSS ATSSSTAKNLMQFHTV K V I A K N 2 0 0 0 0 1 0 0 0 2 0 1 0 0 0 3 2 0 0 1 0 12 0 1204.6663 Q7L2E3-3;H7BXY3;Q7L2E3;Q7L2E3-2 Q7L2E3-3 213 224 DHX30 Putative ATP-dependent RNA helicase DHX30 yes no 2 0.0034305 70.089 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 7850300 1062500 897080 2711300 1117300 1010700 1051400 8482 656 8595 38130;38131;38132;38133;38134;38135 25221;25222;25223;25224 25221 4 VITDVYYVDGTEVERK EVRTLVTRVITDVYYV DGTEVERKVTEETEEP R V I R K V 0 1 0 2 0 0 2 1 0 1 0 1 0 0 0 0 2 0 2 4 0 16 1 1884.9469 Q12888;Q12888-2;A6NNK5;F8VY86 Q12888 1253 1268 TP53BP1 Tumor suppressor p53-binding protein 1 yes no 3 1.1492E-37 114.21 By matching By matching By matching By matching By matching By MS/MS 1 13376000 0 0 0 0 0 13376000 8483 1063 8596 38136 25225;25226 25225 2 VIVDFAGSSKLR HMHTVGEKVIVDFAGS FAGSSKLRFRLGYHAI K V I L R F 1 1 0 1 0 0 0 1 0 1 1 1 0 1 0 2 0 0 0 2 0 12 1 1290.7296 C9JZ40;Q7Z2E3-4;Q7Z2E3-5;Q7Z2E3-9;Q7Z2E3-10;Q7Z2E3-11;Q7Z2E3-7;Q7Z2E3;Q7Z2E3-6;Q7Z2E3-2;F8W6G5;Q7Z2E3-3;Q7Z2E3-8;H7BXV7 C9JZ40 194 205 APTX Aprataxin yes no 3 0.0088439 60.301 By matching By matching By matching By matching By matching By MS/MS 1 2032700 0 0 0 0 0 2032700 8484 274 8597 38137 25227 25227 1 VIVQLVTNGK CNYVGPAKVIVQLVTN VQLVTNGKNIHLHAHS K V I G K N 0 0 1 0 0 1 0 1 0 1 1 1 0 0 0 0 1 0 0 3 0 10 0 1069.6495 D6RH30;P19838;P19838-2;D6RC45 D6RH30 104 113 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit yes no 2 0.030524 57.149 By matching By MS/MS By matching By matching By matching By matching 1 1 1 9831300 0 2036800 0 540730 0 7253700 8485 329 8598 38138;38139;38140 25228 25228 1 VKDPHYAEMEEK DGKSDKRKVKDPHYAE HYAEMEEKYYRFGIKP K V K E K Y 1 0 0 1 0 0 3 0 1 0 0 2 1 0 1 0 0 0 1 1 0 12 1 1474.6762 Q12873;E9PG89;Q12873-2;H7C2H0 Q12873 609 620 CHD3 Chromodomain-helicase-DNA-binding protein 3 yes no 3 0.0019081 89.663 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 5605000 0 710940 1345200 0 357680 3191100 8486 430 8599 38141;38142;38143;38144 25229;25230 25230 2 VKEGMNIVEAMER GKHVVFGKVKEGMNIV NIVEAMERFGSRNGKT K V K E R F 1 1 1 0 0 0 3 1 0 1 0 1 2 0 0 0 0 0 0 2 0 13 1 1504.7378 P62937;B4DM82;Q567Q0 P62937 132 144 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 3 2.3542E-14 102.63 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 25840000 0 0 19566000 6274200 0 0 8487 999 8600 38145;38146;38147 25231;25232;25233 25233 3 VKEVSESRNLEK ________________ SESRNLEKKDVETTSS K V K E K K 0 1 1 0 0 0 3 0 0 0 1 2 0 0 0 2 0 0 0 2 0 12 2 1416.7573 Q96RL1;F8VQY2;Q96RL1-2;D6RC40;D6RCQ3;D6RCF3;Q96RL1-5;D6RDZ5;D6R9M3 Q96RL1 8 19 UIMC1 BRCA1-A complex subunit RAP80 yes no 3 0.0067818 93.839 By matching By matching By MS/MS By matching By matching By matching 1 1 1649100 0 0 1479800 0 169290 0 8488 535 8601 38148;38149 25234 25234 0 VKGTNIQENEYVK DSQACQLRVKGTNIQE IQENEYVKMGAYHTIE R V K V K M 0 0 2 0 0 1 2 1 0 1 0 2 0 0 0 0 1 0 1 2 0 13 1 1520.7835 Q9BRX2 Q9BRX2 83 95 PELO Protein pelota homolog yes yes 2;3 0.0007816 92.039 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 3 2 1 2 2 2 55093000 5391000 12397000 3847400 3266700 9549800 20641000 8489 1443 8602 38150;38151;38152;38153;38154;38155;38156;38157;38158;38159;38160;38161 25235;25236;25237;25238;25239;25240;25241 25239 7 VKILFNK GVYGDVQRVKILFNKK RVKILFNKKENALVQM R V K N K K 0 0 1 0 0 0 0 0 0 1 1 2 0 1 0 0 0 0 0 1 0 7 1 860.54837 P26599;P26599-2;P26599-3;A6NLN1 P26599 367 373 PTBP1 Polypyrimidine tract-binding protein 1 yes no 2 8.1083E-31 137.83 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 23594000 0 0 4865800 2432200 4899100 11397000 8490 882 8603 38162;38163;38164;38165 25242;25243;25244 25243 3 VKNSTEFSQMEK AMKKNVAKVKNSTEFS TEFSQMEKSTKKTSFK K V K E K S 0 0 1 0 0 1 2 0 0 0 0 2 1 1 0 2 1 0 0 1 0 12 1 1426.6762 F5H101;Q76FK4-2;Q76FK4-4;A6NJK7;Q76FK4;F8WE42;Q76FK4-3;F5GWN9 F5H101 394 405 NOL8 Nucleolar protein 8 yes no 3 0.022874 50.897 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 7258400 828800 1060800 1423700 1252700 1043200 1649200 8491 27 8604 38166;38167;38168;38169;38170;38171 25245 25245 1 VKPAPDETSFSEALLK LCEMAFPRVKPAPDET SFSEALLKRNQDLAPN R V K L K R 2 0 0 1 0 0 2 0 0 0 2 2 0 1 2 2 1 0 0 1 0 16 1 1730.9091 Q12905 Q12905 44 59 ILF2 Interleukin enhancer-binding factor 2 yes yes 2;3 8.5769E-07 90.259 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 19960000 0 8010200 0 0 11950000 0 8492 1064 8605 38172;38173 25246;25247 25246 2 VKPAPDETSFSEALLKR LCEMAFPRVKPAPDET FSEALLKRNQDLAPNS R V K K R N 2 1 0 1 0 0 2 0 0 0 2 2 0 1 2 2 1 0 0 1 0 17 2 1887.0102 Q12905 Q12905 44 60 ILF2 Interleukin enhancer-binding factor 2 yes yes 4 1.3764E-21 104.16 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 27516000 0 19220000 6800000 0 1495400 0 8493 1064 8606 38174;38175;38176 25248;25249;25250 25250 3 VKPLHPNATST LGLSRLARVKPLHPNA LHPNATST________ R V K S T - 1 0 1 0 0 0 0 0 1 0 1 1 0 0 2 1 2 0 0 1 0 11 1 1163.6299 Q96B01-2;Q96B01;Q96B01-3;B4DUS5 Q96B01-2 325 335 RAD51AP1 RAD51-associated protein 1 yes no 2 0.027389 64.224 By matching By MS/MS By matching By matching By matching By matching 1 547840 0 547840 0 0 0 0 8494 1369 8607 38177 25251 25251 1 VKPTELCAGHLIGGTDSCQGDSGGPLVCFEK RNEYLDGRVKPTELCA GPLVCFEKDKYILQGV R V K E K D 1 0 0 2 3 1 2 6 1 1 3 2 0 1 2 2 2 0 0 2 0 31 1 3288.5213 CON__P06868 CON__P06868 741 771 yes yes 4 0.035396 34.267 By matching By matching By matching By matching By matching By MS/MS 1 13319000 0 0 0 0 0 13319000 + 8495 295 8608 38178 25252 25252 0 VKTEQQESDSVQCMPVAK TPLPLVSRVKTEQQES VQCMPVAKRLWDSGQK R V K A K R 1 0 0 1 1 3 2 0 0 0 0 2 1 0 1 2 1 0 0 3 0 18 1 2062.9663 Q96RE7 Q96RE7 166 183 NACC1 Nucleus accumbens-associated protein 1 yes yes 3 0.0016293 58.246 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 4346100 367490 1071600 1269000 512570 0 1125500 8496 1417 8609 38179;38180;38181;38182;38183 25253;25254 25254 2 VKTIFPHTAGSNK LNMMKKQKVKTIFPHT PHTAGSNKTLLSFAQG K V K N K T 1 0 1 0 0 0 0 1 1 1 0 2 0 1 1 1 2 0 0 1 0 13 1 1398.7619 Q9UHR4 Q9UHR4 344 356 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 3 0.0015651 88.163 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 2 1 16090000 0 1943300 1676200 1447200 7074900 3948800 8497 1595 8610 38184;38185;38186;38187;38188;38189 25255;25256;25257;25258 25256 4 VLAGETLSVNDPPDVLDRQK VVREEMEKVLAGETLS PDVLDRQKCLAALASL K V L Q K C 1 1 1 3 0 1 1 1 0 0 3 1 0 0 2 1 1 0 0 3 0 20 1 2165.1328 Q12906-5;Q12906-4;Q12906-2;Q12906-6;Q12906-3;C9JFV5;Q12906;G5E9M5 Q12906-5 183 202 ILF3 Interleukin enhancer-binding factor 3 yes no 3 1.957E-102 128.82 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 224780000 0 0 45850000 0 178930000 0 8498 243 8611 38190;38191;38192 25259;25260;25261 25261 3 VLANNSLSFEK NVINTHTKVLANNSLS NNSLSFEKAYCEYRLN K V L E K A 1 0 2 0 0 0 1 0 0 0 2 1 0 1 0 2 0 0 0 1 0 11 0 1220.6401 G5E9Z8;H0YH39;O76094 G5E9Z8 74 84 SRP72 Signal recognition particle subunit SRP72 yes no 2 0.014835 59.265 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5177000 2049900 0 825610 987730 0 1313700 8499 600 8612 38193;38194;38195;38196 25262 25262 1 VLANPGNSQVAR TFLVELSRVLANPGNS PGNSQVARVAAGLQIK R V L A R V 2 1 2 0 0 1 0 1 0 0 1 0 0 0 1 1 0 0 0 2 0 12 0 1224.6575 Q14974 Q14974 43 54 KPNB1 Importin subunit beta-1 yes yes 2 0.010262 66.538 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 9913600 1852800 3229100 1164900 391200 0 3275600 8500 1119 8613 38197;38198;38199;38200;38201 25263;25264;25265 25263 2 VLATQPGPGR LDPKVAQRVLATQPGP ATQPGPGRGRKKDHGF R V L G R G 1 1 0 0 0 1 0 2 0 0 1 0 0 0 2 0 1 0 0 1 0 10 0 994.55598 Q5JTH9-2;E9PCK7;Q5JTH9;F5H456 Q5JTH9-2 1029 1038 RRP12 RRP12-like protein yes no 2 0.026777 58.699 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 10046000 969880 1365400 619200 615130 2934500 3542000 8501 414 8614 38202;38203;38204;38205;38206;38207 25266;25267 25266 2 VLATVTKPVGGDKNGGTR VEKKKKEKVLATVTKP GDKNGGTRVVKLRKMP K V L T R V 1 1 1 1 0 0 0 4 0 0 1 2 0 0 1 0 3 0 0 3 0 18 2 1768.9795 F8W181;Q02878;F8VZ45;F8VZA3;F8VWR1 F8W181 28 45 RPL6 60S ribosomal protein L6 yes no 3 0.031709 41.695 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1421500 0 483610 0 0 476130 461750 8502 551 8615 38208;38209;38210 25268 25268 1 VLCAVSGPR YLEAGGTKVLCAVSGP LCAVSGPRQAEGGERG K V L P R Q 1 1 0 0 1 0 0 1 0 0 1 0 0 0 1 1 0 0 0 2 0 9 0 957.50659 Q5RKV6 Q5RKV6 62 70 EXOSC6 Exosome complex component MTR3 yes yes 2 0.013763 79.148 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 6012800 0 1110300 1273700 0 1090800 2537900 8503 1185 8616 38211;38212;38213;38214 25269;25270;25271 25270 3 VLCFDSTTAPVANTQGPNHK AAKPCHRRVLCFDSTT NTQGPNHKMVSQNKER R V L H K M 2 0 2 1 1 1 0 1 1 0 1 1 0 1 2 1 3 0 0 2 0 20 0 2156.0321 H0YET3;Q14207 H0YET3 62 81 NPAT Protein NPAT yes no 3 0.0024285 48.288 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 4625100 3251100 0 0 0 0 1374000 8504 618 8617 38215;38216 25272;25273;25274;25275 25273 4 VLCLHLK FWIQKLPKVLCLHLKR KVLCLHLKRFHWTAYL K V L L K R 0 0 0 0 1 0 0 0 1 0 3 1 0 0 0 0 0 0 0 1 0 7 0 881.51569 Q6JHV3;H0YMI4;Q9Y6I4;B3KMX7;H0YLB7;H0YKU8;F5H1A6;B4DWJ6 Q6JHV3 384 390 USP3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 2 0.014943 89.903 By MS/MS By matching By matching By matching By matching By MS/MS 2 1 1 1 1 23749000 4369300 0 1942100 2327400 2029300 13080000 8505 628 8618 38217;38218;38219;38220;38221;38222 25276;25277;25278 25278 3 VLCPSNSSQRVPLQAQK VNSGQAQRVLCPSNSS RVPLQAQKLVSSHKPV R V L Q K L 1 1 1 0 1 3 0 0 0 0 2 1 0 0 2 3 0 0 0 2 0 17 1 1910.9996 O14965 O14965 47 63 AURKA Aurora kinase A yes yes 3 0.0021076 55.415 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 70669000 4861200 15315000 9112700 3217400 5276400 32887000 8506 698 8619 38223;38224;38225;38226;38227;38228 25279 25279 1 VLDKGKPEDVMPSVK CRQKQHRKVLDKGKPE EDVMPSVKGAQERLPT K V L V K G 0 0 0 2 0 0 1 1 0 0 1 3 1 0 2 1 0 0 0 3 0 15 2 1640.8807 H3BRL3;O14562;B3KW52 H3BRL3 184 198 UBFD1 Ubiquitin domain-containing protein UBFD1 yes no 3 0.029768 47.301 By matching By matching By matching By matching By MS/MS By matching 1 978090 0 0 0 0 978090 0 8507 644 8620 38229 25280 25280 1 VLDLCAAPGGK LELRDGEKVLDLCAAP LCAAPGGKSIALLQCA K V L G K S 2 0 0 1 1 0 0 2 0 0 2 1 0 0 1 0 0 0 0 1 0 11 0 1099.5696 Q9H649 Q9H649 135 145 NSUN3 Putative methyltransferase NSUN3 yes yes 2 0.013586 60.641 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 4917000 261810 0 1336600 0 492840 2825700 8508 1495 8621 38230;38231;38232;38233 25281 25281 1 VLDLEPKAVTDQTVSK ENNNNNEKVLDLEPKA VTDQTVSKKNKRKNKA K V L S K K 1 0 0 2 0 1 1 0 0 0 2 2 0 0 1 1 2 0 0 3 0 16 1 1741.9462 P38432 P38432 145 160 COIL Coilin yes yes 2;3 3.4343E-97 138.98 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 3 1 1 98356000 11815000 0 12200000 17765000 15919000 40658000 8509 904 8622 38234;38235;38236;38237;38238;38239;38240 25282;25283;25284;25285;25286;25287 25287 5 VLDLEPKAVTDQTVSKK ENNNNNEKVLDLEPKA TDQTVSKKNKRKNKAT K V L K K N 1 0 0 2 0 1 1 0 0 0 2 3 0 0 1 1 2 0 0 3 0 17 2 1870.0411 P38432 P38432 145 161 COIL Coilin yes yes 3;4 0.0060075 62.104 By MS/MS By matching By matching By MS/MS By matching By matching 2 1 2 2 2 14453000 4325100 0 2030000 1545200 2023000 4529800 8510 904 8623 38241;38242;38243;38244;38245;38246;38247;38248;38249 25288;25289 25288 2 VLECDIIK SLFEQYGKVLECDIIK VLECDIIKNYGFVHIE K V L I K N 0 0 0 1 1 0 1 0 0 2 1 1 0 0 0 0 0 0 0 1 0 8 0 988.52632 Q9BWF3;E9PB51;Q9BQ04;E7EQS3;Q9BWF3-3;D6R9K7;Q9BWF3-2;E9PLB0;E9PM61 Q9BWF3 28 35 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B yes no 2 0.008442 93.429 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 30628000 0 6570200 7214100 1855500 1000600 13988000 8511 1457 8624 38250;38251;38252;38253;38254 25290;25291;25292 25292 3 VLEEANQAINPK KQARELIKVLEEANQA ANQAINPKLMQLVDHR K V L P K L 2 0 2 0 0 1 2 0 0 1 1 1 0 0 1 0 0 0 0 1 0 12 0 1324.6987 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 457 468 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 2 2.6392E-79 144.28 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 1 2 1 3 1 1124500000 183150000 165600000 130050000 118620000 180030000 347040000 8512 1361;629 8625 38255;38256;38257;38258;38259;38260;38261;38262;38263;38264;38265 25293;25294;25295;25296;25297;25298;25299;25300;25301 25300 8 VLEEMESR LVVRYTPKVLEEMESR VLEEMESRFEKMRSAK K V L S R F 0 1 0 0 0 0 3 0 0 0 1 0 1 0 0 1 0 0 0 1 0 8 0 991.46445 G3V1D4;Q9NUP9 G3V1D4 153 160 LIN7C Protein lin-7 homolog C yes no 2 0.014419 88.819 By matching By matching By matching By matching By matching By MS/MS 1 1 2752700 0 651160 0 0 0 2101600 8513 575 8626 38266;38267 25302 25302 1 VLEGNEQFINAAK RLGEHNIKVLEGNEQF EQFINAAKIIRHPKYN K V L A K I 2 0 2 0 0 1 2 1 0 1 1 1 0 1 0 0 0 0 0 1 0 13 0 1431.7358 B1AN99;F8W7P3;P35030-3;P35030-2;P35030-4;P35030 B1AN99 92 104 PRSS3 Trypsin-3 yes no 2 0.0022327 66.023 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4410400 0 1603700 0 1669800 0 1136900 8514 66 8627 38268;38269;38270 25303 25303 1 VLELDNVK SKLGEFAKVLELDNVK VLELDNVKSEIIPMFS K V L V K S 0 0 1 1 0 0 1 0 0 0 2 1 0 0 0 0 0 0 0 2 0 8 0 928.52295 F5H3X9;B4DDF7;P30153;E9PH38 F5H3X9 140 147 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 2 0.0074874 94.114 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 6728000 498840 3008000 1198200 874960 1148100 0 8515 81 8628 38271;38272;38273;38274;38275 25304;25305 25305 2 VLELTAENER RNLETQHKVLELTAEN ELTAENERLQKKVEQL K V L E R L 1 1 1 0 0 0 3 0 0 0 2 0 0 0 0 0 1 0 0 1 0 10 0 1172.6037 P17676 P17676 303 312 CEBPB CCAAT/enhancer-binding protein beta yes yes 2 0.0002704 106.62 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 1 1 1 27571000 5208600 3013800 2170700 4372100 8120200 4685400 8516 851 8629 38276;38277;38278;38279;38280;38281;38282 25306;25307;25308;25309;25310;25311;25312;25313;25314 25311 9 VLELTAENERLQK RNLETQHKVLELTAEN AENERLQKKVEQLSRE K V L Q K K 1 1 1 0 0 1 3 0 0 0 3 1 0 0 0 0 1 0 0 1 0 13 1 1541.8413 P17676 P17676 303 315 CEBPB CCAAT/enhancer-binding protein beta yes yes 2;3 1.5277E-08 100.02 By MS/MS By MS/MS By matching By MS/MS By matching By matching 2 1 1 2 2 1 13614000 2182300 1112500 2499500 4420900 1356400 2042300 8517 851 8630 38283;38284;38285;38286;38287;38288;38289;38290;38291 25315;25316;25317 25315 3 VLELTAENERLQKK RNLETQHKVLELTAEN ENERLQKKVEQLSREL K V L K K V 1 1 1 0 0 1 3 0 0 0 3 2 0 0 0 0 1 0 0 1 0 14 2 1669.9363 P17676 P17676 303 316 CEBPB CCAAT/enhancer-binding protein beta yes yes 3 0.003456 73.273 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 8419400 3078900 612180 1054700 2399800 1273800 0 8518 851 8631 38292;38293;38294;38295;38296 25318;25319;25320;25321 25318 4 VLENAEGAR VMEGKQAKVLENAEGA LENAEGARTTPSVVAF K V L A R T 2 1 1 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 1 0 9 0 957.48796 B7Z4V2;P38646;D6RJI2;D6RA73 B7Z4V2 63 71 HSPA9 Stress-70 protein, mitochondrial yes no 2 0.012883 80.688 By matching By matching By MS/MS By matching By matching By matching 1 1649000 0 0 1649000 0 0 0 8519 187 8632 38297 25322 25322 1 VLEQLTGQTPVFSK DRLTRAAKVLEQLTGQ GQTPVFSKARYTVRSF K V L S K A 0 0 0 0 0 2 1 1 0 0 2 1 0 1 1 1 2 0 0 2 0 14 0 1545.8403 P62913;P62913-2;Q5VVC9;Q5VVC8 P62913 39 52 RPL11 60S ribosomal protein L11 yes no 2 0 201.72 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 83494000 0 0 0 41928000 41566000 0 8520 998 8633 38298;38299;38300 25323;25324;25325 25325 3 VLEQLTGQTPVFSKAR DRLTRAAKVLEQLTGQ TPVFSKARYTVRSFGI K V L A R Y 1 1 0 0 0 2 1 1 0 0 2 1 0 1 1 1 2 0 0 2 0 16 1 1772.9785 P62913;P62913-2;Q5VVC9;Q5VVC8 P62913 39 54 RPL11 60S ribosomal protein L11 yes no 3 6.2486E-07 91.592 By matching By matching By matching By MS/MS By matching By matching 1 42715000 0 0 0 42715000 0 0 8521 998 8634 38301 25326 25326 1 VLETFLAK NSTSLKAKVLETFLAK VLETFLAKSRPELLEY K V L A K S 1 0 0 0 0 0 1 0 0 0 2 1 0 1 0 0 1 0 0 1 0 8 0 919.53787 Q14258 Q14258 440 447 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 yes yes 2 1.0926E-24 132.08 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 48147000 9047400 3208600 6503300 2034400 16461000 10893000 8522 1105 8635 38302;38303;38304;38305;38306;38307 25327;25328;25329;25330;25331;25332 25332 6 VLFGPEAPK VTHTETGKVLFGPEAP LFGPEAPKASQLDAWL K V L P K A 1 0 0 0 0 0 1 1 0 0 1 1 0 1 2 0 0 0 0 1 0 9 0 956.53312 P51531-2;P51531 P51531-2 605 613 SMARCA2 Probable global transcription activator SNF2L2 yes no 2 0.016105 74.173 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 6620700 702170 0 0 0 558140 5360400 8523 951 8636 38308;38309;38310 25333;25334 25334 2 VLFSSNGGVVK SVSEEDLKVLFSSNGG SSNGGVVKGFKFFQKD K V L V K G 0 0 1 0 0 0 0 2 0 0 1 1 0 1 0 2 0 0 0 3 0 11 0 1105.6132 P26599;P26599-2;P26599-3;A6NLN1 P26599 472 482 PTBP1 Polypyrimidine tract-binding protein 1 yes no 2 0.0026696 86.344 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 146850000 0 32481000 14212000 7342800 30631000 62178000 8524 882 8637 38311;38312;38313;38314;38315;38316 25335;25336;25337;25338;25339 25337 5 VLFSSNGGVVKGFK SVSEEDLKVLFSSNGG GGVVKGFKFFQKDRKM K V L F K F 0 0 1 0 0 0 0 3 0 0 1 2 0 2 0 2 0 0 0 3 0 14 1 1437.798 P26599;P26599-2;P26599-3;A6NLN1 P26599 472 485 PTBP1 Polypyrimidine tract-binding protein 1 yes no 2;3 3.6416E-124 153.81 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 2 1 604680000 37249000 409380000 62736000 22222000 20870000 52221000 8525 882 8638 38317;38318;38319;38320;38321;38322;38323;38324;38325 25340;25341;25342;25343;25344;25345;25346;25347;25348;25349 25346 10 VLFTCFK GFKPGQRKVLFTCFKR KVLFTCFKRNDKREVK K V L F K R 0 0 0 0 1 0 0 0 0 0 1 1 0 2 0 0 1 0 0 1 0 7 0 913.47316 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5;Q02880-2;Q02880;E9PCY5 Q02880-2 745 751 TOP2A;TOP2B DNA topoisomerase 2-alpha;DNA topoisomerase 2-beta;DNA topoisomerase 2 no no 2 5.5919E-21 132.96 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 62856000 0 12258000 0 0 0 50598000 8526 1035;655 8639 38326;38327 25350;25351 25350 2 VLFTGVVDAR NQESTAPKVLFTGVVD FTGVVDARGERAVLAL K V L A R G 1 1 0 1 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 3 0 10 0 1075.6026 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7;Q14676-4 Q14676 1895 1904 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 2 0.018537 69.672 By matching By matching By matching By matching By matching By MS/MS 1 11796000 0 0 0 0 0 11796000 8527 1109 8640 38328 25352 25352 1 VLGCPEALTGSYK GAGNISLKVLGCPEAL EALTGSYKSMFQKLPD K V L Y K S 1 0 0 0 1 0 1 2 0 0 2 1 0 0 1 1 1 0 1 1 0 13 0 1393.6912 Q14181 Q14181 195 207 POLA2 DNA polymerase alpha subunit B yes yes 2 0.0022327 66.023 By matching By matching By matching By matching By matching By MS/MS 1 1329600 0 0 0 0 0 1329600 8528 1099 8641 38329 25353 25353 1 VLGIQVDTDGSGR GIRSSYIRVLGIQVDT VDTDGSGRSFAGAVSP R V L G R S 0 1 0 2 0 1 0 3 0 1 1 0 0 0 0 1 1 0 0 2 0 13 0 1315.6732 P33992;B1AHB1;E7EQY5 P33992 296 308 MCM5 DNA replication licensing factor MCM5 yes no 2 0.01162 53.869 By matching By matching By matching By matching By matching By MS/MS 1 1209000 0 0 0 0 0 1209000 8529 892 8642 38330 25354 25354 1 VLGLAHSTTGPQESK NPHKPTGKVLGLAHST TTGPQESKGISQFQVL K V L S K G 1 0 0 0 0 1 1 2 1 0 2 1 0 0 1 2 2 0 0 1 0 15 0 1523.7944 Q14865-2;Q14865 Q14865-2 678 692 ARID5B AT-rich interactive domain-containing protein 5B yes no 3 0.00038164 71.279 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 11866000 0 2851200 2891100 1635600 1225100 3263500 8530 1117 8643 38331;38332;38333;38334;38335 25355;25356;25357 25355 3 VLGSSTSATNSTSVSSR VAARAPRKVLGSSTSA NSTSVSSRKAENKYAG K V L S R K 1 1 1 0 0 0 0 1 0 0 1 0 0 0 0 7 3 0 0 2 0 17 0 1639.8013 Q15004;H0YMA4;A6NNU5 Q15004 25 41 KIAA0101 PCNA-associated factor yes no 2 2.3161E-73 127.83 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 89336000 8429500 16905000 16109000 3848000 9267000 34778000 8531 1124 8644 38336;38337;38338;38339;38340;38341;38342 25358;25359;25360;25361;25362;25363;25364;25365;25366 25360 9 VLGSSTSATNSTSVSSRK VAARAPRKVLGSSTSA STSVSSRKAENKYAGG K V L R K A 1 1 1 0 0 0 0 1 0 0 1 1 0 0 0 7 3 0 0 2 0 18 1 1767.8963 Q15004;H0YMA4;A6NNU5 Q15004 25 42 KIAA0101 PCNA-associated factor yes no 3 0.00093291 64.454 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 97835000 1264000 23975000 20637000 5503800 9889100 36567000 8532 1124 8645 38343;38344;38345;38346;38347;38348 25367;25368;25369 25368 3 VLGSSTSATNSTSVSSRKAENK VAARAPRKVLGSSTSA SSRKAENKYAGGNPVC K V L N K Y 2 1 2 0 0 0 1 1 0 0 1 2 0 0 0 7 3 0 0 2 0 22 2 2210.1139 Q15004;H0YMA4 Q15004 25 46 KIAA0101 PCNA-associated factor yes no 3;4 1.469E-10 88.486 By matching By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 2 2 2 2 2 36707000 1655800 7508000 12204000 1888000 3729400 9721800 8533 1124 8646 38349;38350;38351;38352;38353;38354;38355;38356;38357;38358;38359;38360 25370;25371;25372;25373;25374 25371 5 VLGTEAVQDPTK VRISNLMRVLGTEAVQ EAVQDPTKVEAHVRAQ R V L T K V 1 0 0 1 0 1 1 1 0 0 1 1 0 0 1 0 2 0 0 2 0 12 0 1256.6612 E7EVD1;O43395 E7EVD1 435 446 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 yes no 2 0.016021 54.023 By matching By matching By matching By matching By MS/MS By matching 1 1 2289000 0 0 0 0 1021100 1267800 8534 389 8647 38361;38362 25375 25375 1 VLIIGSGGREHTLAWK ________________ REHTLAWKLAQSHHVK R V L W K L 1 1 0 0 0 0 1 3 1 2 2 1 0 0 0 1 1 1 0 1 0 16 1 1735.9733 C9JBJ1;C9JTV6;F8WD69;P22102-2;P22102;C9JZG2;C9JKQ7 C9JBJ1 5 20 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 3 0.0026056 56.569 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 44591000 0 0 0 0 3240700 41350000 8535 239 8648 38363;38364 25376;25377 25376 2 VLISDSLDPCCRK MAFANLRKVLISDSLD SLDPCCRKILQDGGLQ K V L R K I 0 1 0 2 2 0 0 0 0 1 2 1 0 0 1 2 0 0 0 1 0 13 1 1561.7592 O43175 O43175 9 21 PHGDH D-3-phosphoglycerate dehydrogenase yes yes 3 0.006568 53.034 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 1 1 14789000 2881400 1860300 0 1054900 0 8992500 8536 711 8649 38365;38366;38367;38368 25378;25379 25379 2 VLKDRELCSGPSK LRKGTASRVLKDRELC ELCSGPSKLCQALAIN R V L S K L 0 1 0 1 1 0 1 1 0 0 2 2 0 0 1 2 0 0 0 1 0 13 2 1487.7766 G5E9E2;Q5J9I4;P29372-2;P29372;A2IDA3 G5E9E2 191 203 MPG DNA-3-methyladenine glycosylase yes no 3 0.0069671 71.085 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 81062000 5810400 12075000 14958000 7163600 15369000 25685000 8537 594 8650 38369;38370;38371;38372;38373;38374 25380;25381;25382;25383;25384 25381 5 VLKEKEQQQQQQQQQQQK KQAGEEEKVLKEKEQQ QQQQQQQKKKRDTRKG K V L Q K K 0 0 0 0 0 11 2 0 0 0 1 3 0 0 0 0 0 0 0 1 0 18 2 2281.1775 E9PC67;Q5STZ8 E9PC67 58 75 ABCF1 yes no 3;4 0.0033917 48.899 By matching By matching By matching By MS/MS By matching By matching 1 2 1 3316500 0 314620 0 2531500 0 470390 8538 411 8651 38375;38376;38377;38378 25385;25386 25385 2 VLKGNTAEGCVHETQEKQK NASLYLLRVLKGNTAE HETQEKQKAGTDPSHM R V L Q K A 1 0 1 0 1 2 3 2 1 0 1 3 0 0 0 0 2 0 0 2 0 19 2 2155.0692 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 853 871 MYBBP1A Myb-binding protein 1A yes no 4 0.0028193 49.343 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 16189000 2849500 0 2450200 2410000 0 8479100 8539 682 8652 38379;38380;38381;38382 25387 25387 1 VLKQVHPDTGISSK SYSVYVYKVLKQVHPD PDTGISSKAMGIMNSF K V L S K A 0 0 0 1 0 1 0 1 1 1 1 2 0 0 1 2 1 0 0 2 0 14 1 1507.8358 Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;O60814;Q5QNW6-2;B4DR52;Q99880;P57053;Q96A08 Q99879 45 58 HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;HIST1H2BK;HIST1H2BL;H2BFS;HIST1H2BA Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type 1-K;Histone H2B;Histone H2B type 1-L;Histone H2B type F-S;Histone H2B type 1-A no no 2;3 3.133E-08 99.941 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 3 3 162540000 31819000 28181000 15811000 14920000 52431000 19377000 8540 119 8653 38383;38384;38385;38386;38387;38388;38389;38390;38391;38392;38393;38394;38395;38396 25388;25389;25390;25391;25392;25393;25394;25395;25396 25396 9 VLLAEEGIAPLSSAGPGKEEK KRVRIAPKVLLAEEGI AGPGKEEKLLFGEGFS K V L E K L 3 0 0 0 0 0 4 3 0 1 3 2 0 0 2 2 0 0 0 1 0 21 1 2094.1209 Q08050-2;Q08050;H0YG99;Q08050-3 Q08050-2 408 428 FOXM1 Forkhead box protein M1 yes no 3 1.9668E-09 86.179 By matching By MS/MS By matching By matching By matching By matching 1 14685000 0 14685000 0 0 0 0 8541 1046 8654 38397 25397 25397 1 VLLALHDRAPQLK YRACLYERVLLALHDR HDRAPQLKISDDRLTV R V L L K I 2 1 0 1 0 1 0 0 1 0 4 1 0 0 1 0 0 0 0 1 0 13 1 1472.8827 F5H8F7;Q9UBL3-3;Q9UBL3;Q9UBL3-2 F5H8F7 242 254 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 yes no 3 0.0027802 64.64 By matching By matching By matching By matching By matching By MS/MS 1 1881300 0 0 0 0 0 1881300 8542 530 8655 38398 25398 25398 1 VLLGETGKEKLPR TIFQNKKRVLLGETGK TGKEKLPRYYKNIGLG R V L P R Y 0 1 0 0 0 0 2 2 0 0 3 2 0 0 1 0 1 0 0 1 0 13 2 1438.8508 P62280 P62280 23 35 RPS11 40S ribosomal protein S11 yes yes 3 0.0063963 72.29 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 1 1 4318000 780500 713120 0 405940 1195200 1223200 8543 989 8656 38399;38400;38401;38402;38403 25399;25400 25400 2 VLLGVGDPK HLPSKKKKVLLGVGDP LLGVGDPKIGAAIQEE K V L P K I 0 0 0 1 0 0 0 2 0 0 2 1 0 0 1 0 0 0 0 2 0 9 0 896.53312 O00567;Q5JXT2 O00567 91 99 NOP56 Nucleolar protein 56 yes no 2 0.029695 64.654 By matching By MS/MS By matching By matching By matching By matching 1 1 1 27350000 0 3185200 0 0 10979000 13186000 8544 692 8657 38404;38405;38406 25401 25401 1 VLMQNQKGKGEAGNSDSMCLR SGGQKSAKVLMQNQKG NSDSMCLRSRKTKSQP K V L L R S 1 1 2 1 1 2 1 3 0 0 2 2 2 0 0 2 0 0 0 1 0 21 2 2322.0879 P46013;F5H4V4;P46013-2 P46013 3181 3201 MKI67 Antigen KI-67 no no 4 0.0023237 48.616 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 15700000 0 2477200 5200600 2173700 2130700 3717600 8545 919;920 8658 38407;38408;38409;38410;38411 25402 25402 1 VLMTQQPRPVL ITIKKRFKVLMTQQPR TQQPRPVL________ K V L V L - 0 1 0 0 0 2 0 0 0 0 2 0 1 0 2 0 1 0 0 2 0 11 1 1280.7275 Q9NPE3 Q9NPE3 54 64 NOP10 H/ACA ribonucleoprotein complex subunit 3 yes yes 2 0 199.68 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 2 2 1 1 163470000 72269000 15073000 21126000 15095000 13293000 26614000 8546 1527 8659;8660 38412;38413;38414;38415;38416;38417;38418;38419 25403;25404;25405;25406;25407;25408;25409;25410 25408 173 8 VLNMMPEEK CQLLFALKVLNMMPEE LNMMPEEKLVEALAAA K V L E K L 0 0 1 0 0 0 2 0 0 0 1 1 2 0 1 0 0 0 0 1 0 9 0 1089.5199 Q9BRJ7 Q9BRJ7 179 187 NUDT16L1 Protein syndesmos yes yes 2 2.1578E-29 134.05 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 47226000 2549900 8005400 8170800 3705800 2099300 22695000 8547 1440 8661;8662 38420;38421;38422;38423;38424;38425;38426 25411;25412;25413;25414;25415;25416 25412 167;168 6 VLNNFISNQK HVPARPYRVLNNFISN NNFISNQKMDFKEDLS R V L Q K M 0 0 3 0 0 1 0 0 0 1 1 1 0 1 0 1 0 0 0 1 0 10 0 1175.6299 P46013;F5H4V4;P46013-2;E7EN66 P46013 736 745 MKI67 Antigen KI-67 no no 2 0.0027611 97.813 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 1 9647500 467500 1538400 1623700 691330 0 5326600 8548 919;920 8663 38427;38428;38429;38430;38431 25417;25418;25419 25418 3 VLPIKPADVEEPAVPQTPR SQTQPLHKVLPIKPAD PAVPQTPRVASIQGRP K V L P R V 2 1 0 1 0 1 2 0 0 1 1 1 0 0 5 0 1 0 0 3 0 19 1 2055.1364 H0Y3K4;Q96EV2 H0Y3K4 702 720 RBM33 RNA-binding protein 33 yes no 3 0.0010816 60.334 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 34764000 13052000 21712000 0 0 0 0 8549 607 8664 38432;38433 25420;25421 25420 2 VLPITVPK VVGVPEKKVLPITVPK VLPITVPKSPAFALKN K V L P K S 0 0 0 0 0 0 0 0 0 1 1 1 0 0 2 0 1 0 0 2 0 8 0 865.56369 Q9ULW0;Q96RR5 Q9ULW0 478 485 TPX2;HCA90 Targeting protein for Xklp2 yes no 2 0.015568 84.498 By MS/MS By matching By matching By matching By matching By matching 1 17121000 17121000 0 0 0 0 0 8550 1611 8665 38434 25422 25422 1 VLPITVPKSPAFALKNR VVGVPEKKVLPITVPK PAFALKNRIRMPTKED K V L N R I 2 1 1 0 0 0 0 0 0 1 2 2 0 1 3 1 1 0 0 2 0 17 2 1850.1142 Q9ULW0;Q96RR5 Q9ULW0 478 494 TPX2;HCA90 Targeting protein for Xklp2 yes no 3;4 2.1108E-110 141.65 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 535760000 55378000 178350000 88390000 42815000 32820000 138000000 8551 1611 8666 38435;38436;38437;38438;38439;38440;38441;38442;38443;38444;38445 25423;25424;25425;25426;25427;25428;25429;25430;25431 25423 8 VLPVPQKAVPYPQR VLSLSQSKVLPVPQKA KAVPYPQRDMPIQAFL K V L Q R D 1 1 0 0 0 2 0 0 0 0 1 1 0 0 4 0 0 0 1 3 0 14 1 1590.9246 CON__P02666 CON__P02666 170 183 yes yes 2;3 3.5395E-12 101.89 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 1 2 1 127820000 51768000 14608000 31948000 8461400 10584000 10453000 + 8552 290 8667 38446;38447;38448;38449;38450;38451;38452;38453;38454 25432;25433;25434;25435;25436;25437;25438;25439 25439 8 VLQDMGLPTGAEGR AKLHVAVKVLQDMGLP LPTGAEGRDSSKGEDS K V L G R D 1 1 0 1 0 1 1 3 0 0 2 0 1 0 1 0 1 0 0 1 0 14 0 1442.7188 Q12906-5;Q12906-4;Q12906-2;Q12906-6;Q12906-3;C9JFV5;Q12906;G5E9M5;B4DFG4 Q12906-5 461 474 ILF3 Interleukin enhancer-binding factor 3 yes no 2 0.0011074 71.781 By matching By matching By matching By matching By matching By MS/MS 1 12381000 0 0 0 0 0 12381000 8553 243 8668 38455 25440 25440 1 VLQSEFCNAVR QKLQALQRVLQSEFCN SEFCNAVREATVAAFA R V L V R E 1 1 1 0 1 1 1 0 0 0 1 0 0 1 0 1 0 0 0 2 0 11 0 1321.6449 G3V1D4;Q9NUP9 G3V1D4 41 51 LIN7C Protein lin-7 homolog C yes no 2 0.0058585 70.942 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3196900 0 1304600 591150 0 0 1301200 8554 575 8669 38456;38457;38458 25441 25441 1 VLQVQAQVQSQTQPRIPSTDTQVQPK VLPRFQPRVLQVQAQV TDTQVQPKLQKQAQTQ R V L P K L 1 1 0 1 0 8 0 0 0 1 1 1 0 0 3 2 3 0 0 4 0 26 1 2903.5465 B7ZAS8;Q9ULV3-3;H0Y5D5;Q9BTG3;Q9ULV3-4;Q9ULV3-2;Q5SYW2;Q9ULV3;F5H2X7;Q96KB7 B7ZAS8 214 239 CIZ1 Cip1-interacting zinc finger protein yes no 3 0.0015517 49.66 By matching By MS/MS By matching By matching By matching By matching 1 1 8171500 0 5597200 0 2574300 0 0 8555 203 8670 38459;38460 25442 25442 1 VLRDNIQGITKPAIR GGAKRHRKVLRDNIQG GITKPAIRRLARRGGV K V L I R R 1 2 1 1 0 1 0 1 0 3 1 1 0 0 1 0 1 0 0 1 0 15 2 1692.9999 P62805 P62805 22 36 HIST1H4A Histone H4 yes yes 3;4 0.00051115 82.651 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2 10216000 1010700 843690 1238800 0 1118900 6004100 8556 994 8671 38461;38462;38463;38464;38465;38466 25443;25444;25445 25444 3 VLRLANNPDIVK IGLAKACKVLRLANNP ANNPDIVKVIKKIGHY K V L V K V 1 1 2 1 0 0 0 0 0 1 2 1 0 0 1 0 0 0 0 2 0 12 1 1350.7983 Q9UQ84-4;Q9UQ84 Q9UQ84-4 241 252 EXO1 Exonuclease 1 yes no 3 0.0019852 87.216 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 1 14695000 1212900 3020400 2383900 846780 1162300 6069100 8557 1624 8672 38467;38468;38469;38470;38471;38472 25446;25447 25447 2 VLRLCTVNSVEEK IGQQNEVRVLRLCTVN TVNSVEEKILAAAKYK R V L E K I 0 1 1 0 1 0 2 0 0 0 2 1 0 0 0 1 1 0 0 3 0 13 1 1545.8185 P51531-2;P51531;P51532-5;P51532-2;P51532-3;P51532-4;P51532;Q9HBD4;F5H0X5 P51532-5 1201 1213 SMARCA2;SMARCA4 Probable global transcription activator SNF2L2;Transcription activator BRG1 no no 3 0.010639 55.105 By matching By matching By matching By matching By matching By MS/MS 1 2645600 0 0 0 0 0 2645600 8558 952;951 8673 38473 25448 25448 1 VLRLHYANCK ARILPEEKVLRLHYAN RLHYANCKAYNADFDG K V L C K A 1 1 1 0 1 0 0 0 1 0 2 1 0 0 0 0 0 0 1 1 0 10 1 1272.6761 B9ZVN9;O95602 B9ZVN9 574 583 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 yes no 3 0.009224 76.943 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 6278400 0 0 1188600 688440 2020300 2381100 8559 218 8674 38474;38475;38476;38477 25449;25450;25451 25451 3 VLSAEQGSYFVR AASQPGPKVLSAEQGS EQGSYFVRLGDLGPSF K V L V R L 1 1 0 0 0 1 1 1 0 0 1 0 0 1 0 2 0 0 1 2 0 12 0 1354.6881 Q96Q06-2;Q96Q06 Q96Q06-2 1235 1246 PLIN4 Perilipin-4 yes no 2 0.00069736 93.623 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 3682900 0 849780 0 0 0 2833100 8560 1413 8675 38478;38479 25452;25453 25452 2 VLSASEVAALSSPASSAPHSGGK SSGLSVVKVLSASEVA SAPHSGGKTGMEENRR K V L G K T 5 0 0 0 0 0 1 2 1 0 2 1 0 0 2 7 0 0 0 2 0 23 0 2109.0702 H7BXG5;Q9HCK8-2;Q9HCK8 H7BXG5 141 163 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes no 3 7.4642E-07 60.347 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 10917000 0 7655300 0 3261800 0 0 8561 653 8676 38480;38481 25454;25455 25455 1 VLSHVNSGCQLLPQHQVPAY QVAQLKQKVLSHVNSG PQHQVPAY________ K V L A Y - 1 0 1 0 1 3 0 1 2 0 3 0 0 0 2 2 0 0 1 3 0 20 0 2246.1266 P17535 P17535 328 347 JUND Transcription factor jun-D yes yes 3 6.7505E-66 122.14 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 40256000 16212000 0 0 24044000 0 0 8562 849 8677 38482;38483 25456;25457 25456 2 VLSLQDKSDDLTCK PQNLREDRVLSLQDKS KSDDLTCKSQRLMLQV R V L C K S 0 0 0 3 1 1 0 0 0 0 3 2 0 0 0 2 1 0 0 1 0 14 1 1620.8029 Q7L3T8 Q7L3T8 56 69 PARS2 Probable proline--tRNA ligase, mitochondrial yes yes 2;3 0.0024157 75.911 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1867700 0 0 1867700 0 0 0 8563 1245 8678 38484;38485 25458;25459 25458 2 VLSQSTPGTPSK SPPVIAGRVLSQSTPG STPGTPSKTITISESG R V L S K T 0 0 0 0 0 1 0 1 0 0 1 1 0 0 2 3 2 0 0 1 0 12 0 1200.635 Q6MZP7-3;Q6MZP7 Q6MZP7-3 51 62 LIN54 Protein lin-54 homolog yes no 2 0.021411 62.338 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 3617400 660720 343710 125920 354440 1064500 1068100 8564 1223 8679 38486;38487;38488;38489;38490;38491 25460 25460 0 VLSSLKPAAPSPATAATTAAAASTAASSTASSASK LPEPPVLKVLSSLKPA STASSASKTASPLEHI K V L S K T 13 0 0 0 0 0 0 0 0 0 2 2 0 0 3 9 5 0 0 1 0 35 1 3102.6045 Q9BTC0 Q9BTC0 1275 1309 DIDO1 Death-inducer obliterator 1 yes yes 3 3.9067E-90 106.55 By matching By MS/MS By matching By matching By matching By matching 1 37287000 0 37287000 0 0 0 0 8565 1447 8680 38492 25461 25461 1 VLSTTKPFEYETPEMEK QKRPVIVKVLSTTKPF YETPEMEKKIMFHATV K V L E K K 0 0 0 0 0 0 4 0 0 0 1 2 1 1 2 1 3 0 1 1 0 17 1 2027.9762 Q16666-3;Q16666-2;Q16666;H3BLV7;E7EPR3;H3BR88;H3BR65 Q16666-3 209 225 IFI16 Gamma-interferon-inducible protein 16 yes no 3 2.1894E-08 94.454 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 58249000 12283000 0 12094000 17901000 4717300 11253000 8566 1155 8681 38493;38494;38495;38496;38497 25462;25463;25464;25465;25466 25463 5 VLTANSNPSSPSAAK KRSRVTDKVLTANSNP PSSPSAAKRRRT____ K V L A K R 3 0 2 0 0 0 0 0 0 0 1 1 0 0 2 4 1 0 0 1 0 15 0 1442.7365 Q9NV56 Q9NV56 186 200 MRGBP MRG/MORF4L-binding protein yes yes 2 0.00048602 71.98 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 41453000 6191400 5740400 4690600 5693600 6588100 12549000 8567 1547 8682 38498;38499;38500;38501;38502;38503 25467;25468;25469;25470;25471;25472 25468 5 VLTELLEQER QVQASVVKVLTELLEQ TELLEQERKKVVDTTK K V L E R K 0 1 0 0 0 1 3 0 0 0 3 0 0 0 0 0 1 0 0 1 0 10 0 1228.6663 Q13428-7;E7ETY2;Q13428-6;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 1319 1328 TCOF1 Treacle protein no no 2 2.1629E-115 160.77 By matching By MS/MS By matching By matching By matching By matching 1 24778000 0 24778000 0 0 0 0 8568 1082;383 8683 38504 25473 25473 1 VLTELLEQERK QVQASVVKVLTELLEQ ELLEQERKKVVDTTKE K V L R K K 0 1 0 0 0 1 3 0 0 0 3 1 0 0 0 0 1 0 0 1 0 11 1 1356.7613 Q13428-7;E7ETY2;Q13428-6;Q13428-3;Q13428;Q13428-4;E9PHK9;Q13428-8;Q13428-2 Q13428-3 1319 1329 TCOF1 Treacle protein no no 2;3 0 225.93 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 3 2 2 3 2 151990000 68337000 9683600 29782000 5354100 14679000 24153000 8569 1082;383 8684 38505;38506;38507;38508;38509;38510;38511;38512;38513;38514;38515;38516;38517;38518 25474;25475;25476;25477;25478;25479;25480;25481;25482;25483;25484 25484 11 VLTSDRTLQK FEAHSSSKVLTSDRTL TSDRTLQKLKRAKLDQ K V L Q K L 0 1 0 1 0 1 0 0 0 0 2 1 0 0 0 1 2 0 0 1 0 10 1 1159.6561 Q13416 Q13416 252 261 ORC2 Origin recognition complex subunit 2 yes yes 2 0.008383 90.149 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 5760200 0 654710 2377100 219430 573020 1936000 8570 1081 8685 38519;38520;38521;38522;38523 25485;25486;25487 25486 3 VLTWDGK SDKAYGRKVLTWDGKM KVLTWDGKMSAVSQDA K V L G K M 0 0 0 1 0 0 0 1 0 0 1 1 0 0 0 0 1 1 0 1 0 7 0 817.4334 Q9P275;Q9P275-2;E9PEW0 Q9P275 1040 1046 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.0064305 89.369 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 28429000 6377400 4005200 3123200 0 4685900 10237000 8571 1576 8686 38524;38525;38526;38527;38528 25488;25489;25490;25491 25489 4 VLVATNVAAR GFREGSFKVLVATNVA VATNVAARGLDIPEVD K V L A R G 3 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 3 0 10 0 1012.6029 F5H3H6;Q9BQ39 F5H3H6 441 450 DDX50 ATP-dependent RNA helicase DDX50 yes no 2 0.0093011 76.282 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 4103400 0 762020 0 0 1317200 2024200 8572 515 8687 38529;38530;38531 25492;25493 25492 2 VLVDQTTGLSR FGRIINSRVLVDQTTG DQTTGLSRGVAFIRFD R V L S R G 0 1 0 1 0 1 0 1 0 0 2 0 0 0 0 1 2 0 0 2 0 11 0 1187.651 Q15717 Q15717 137 147 ELAVL1 ELAV-like protein 1 yes yes 2 9.5016E-43 136.5 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 99357000 9937400 21164000 7859200 7207300 18079000 35111000 8573 1146 8688 38532;38533;38534;38535;38536;38537;38538 25494;25495;25496;25497;25498;25499 25495 6 VLVLDTDYK IDALNENKVLVLDTDY LVLDTDYKKYLLFCME K V L Y K K 0 0 0 2 0 0 0 0 0 0 2 1 0 0 0 0 1 0 1 2 0 9 0 1064.5754 CON__P02754 CON__P02754 92 100 yes yes 2 0.013763 79.148 By matching By MS/MS By matching By matching By matching By matching 1 1 1 42640000 0 17486000 0 3494300 0 21659000 + 8574 292 8689 38539;38540;38541 25500 25500 1 VLVLDTDYKK IDALNENKVLVLDTDY VLDTDYKKYLLFCMEN K V L K K Y 0 0 0 2 0 0 0 0 0 0 2 2 0 0 0 0 1 0 1 2 0 10 1 1192.6703 CON__P02754 CON__P02754 92 101 yes yes 2 0.031996 85.533 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 58933000 5991400 9172700 3786100 5820900 7850800 26311000 + 8575 292 8690 38542;38543;38544;38545;38546;38547 25501;25502;25503 25502 3 VLVPGIPGHHAAIKPAPPQTEQVESK PVMNSEAKVLVPGIPG QTEQVESKRKSGGNEV K V L S K R 3 0 0 0 0 2 2 2 2 2 1 2 0 0 5 1 1 0 0 3 0 26 1 2699.4759 Q15061 Q15061 403 428 WDR43 WD repeat-containing protein 43 yes yes 4;5 5.1021E-28 91.238 By MS/MS By matching By MS/MS By matching By matching By MS/MS 2 1 1 1 23318000 17446000 0 3548200 620820 0 1703000 8576 1130 8691 38548;38549;38550;38551;38552 25504;25505;25506;25507;25508;25509 25509 6 VMEEEGLKDEEK MRQKKLEKVMEEEGLK EGLKDEEKRLRRSAHA K V M E K R 0 0 0 1 0 0 5 1 0 0 1 2 1 0 0 0 0 0 0 1 0 12 1 1434.6548 Q15208 Q15208 51 62 STK38 Serine/threonine-protein kinase 38 yes yes 2;3 0.0015302 90.913 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 2 2 1 1 2 8711700 551340 1441900 2574200 601180 841330 2701700 8577 1132 8692 38553;38554;38555;38556;38557;38558;38559;38560;38561 25510;25511;25512;25513;25514 25514 5 VMEGTVAAQDEFYR CTRLIKPKVMEGTVAA AAQDEFYRSGWALNMK K V M Y R S 2 1 0 1 0 1 2 1 0 0 0 0 1 1 0 0 1 0 1 2 0 14 0 1614.7348 P41240;E7EQW6 P41240 172 185 CSK Tyrosine-protein kinase CSK yes no 2 1.4854E-12 101.43 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 6035800 0 373280 0 0 0 5662500 8578 912 8693 38562;38563 25515;25516 25515 2 VMEIVDADEK FNKFFKERVMEIVDAD EIVDADEKVRHSKLAE R V M E K V 1 0 0 2 0 0 2 0 0 1 0 1 1 0 0 0 0 0 0 2 0 10 0 1147.5431 Q9Y5B9;F5H063 Q9Y5B9 202 211 SUPT16H FACT complex subunit SPT16 yes no 2 0.0089156 77.288 By matching By matching By matching By matching By matching By MS/MS 1 1694100 0 0 0 0 0 1694100 8579 1653 8694 38564 25517 25517 1 VMEQQSNLQPEAK KFELSGSKVMEQQSNL SNLQPEAKEKECGDSL K V M A K E 1 0 1 0 0 3 2 0 0 0 1 1 1 0 1 1 0 0 0 1 0 13 0 1500.7242 F5H7K2;Q8IWI9;E7ENI0;Q8IWI9-2;H3BU53 F5H7K2 1938 1950 MGA MAX gene-associated protein yes no 2 0.0056704 60.345 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 2248600 473140 373770 0 492030 0 909700 8580 351 8695 38565;38566;38567;38568 25518;25519;25520;25521 25519 4 VMEYENRIR RSGFRDRKVMEYENRI MEYENRIRAYSTPDKI K V M I R A 0 2 1 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 1 1 0 9 1 1208.5972 Q9BPX6-2;E9PQV6;Q9BPX6;H9KVB8;Q9BPX6-3;F6XEV2 Q9BPX6-2 111 119 MICU1 Calcium uptake protein 1, mitochondrial yes no 3 0.0067053 91.318 By matching By matching By MS/MS By matching By matching By matching 1 637110 0 0 637110 0 0 0 8581 467 8696 38569 25522 25522 1 VMGTFSTVTSTVK VANKLEGKVMGTFSTV STVTSTVKQALQESLV K V M V K Q 0 0 0 0 0 0 0 1 0 0 0 1 1 1 0 2 4 0 0 3 0 13 0 1356.6959 E9PJS4;P08240 E9PJS4 346 358 SRPR Signal recognition particle receptor subunit alpha yes no 2 5.2443E-10 106.54 By matching By matching By matching By matching By matching By MS/MS 1 1 1 10941000 0 204160 0 322690 0 10414000 8582 449 8697 38570;38571;38572 25523;25524 25523 2 VMHSSPSSPSSDGKQK DEQMECSKVMHSSPSS PSSDGKQKTVYQTLSA K V M Q K T 0 0 0 1 0 1 0 1 1 0 0 2 1 0 2 6 0 0 0 1 0 16 1 1657.773 B4DTR3;Q8NA37;H7C428;F5H2A3;Q6ZN50;B4DKE4;B4DFA8;Q0VF99;Q969R2 B4DTR3 303 318 OSBP2 Oxysterol-binding protein;Oxysterol-binding protein 2 yes no 3 0.023595 47.774 By matching By MS/MS By matching By matching By matching By matching 1 1 11560000 0 407990 0 0 11152000 0 8583 83 8698 38573;38574 25525 25525 11 0 VMPTPTNQFKIPK SCLNSKTKVMPTPTNQ TNQFKIPKFSIGDSPD K V M P K F 0 0 1 0 0 1 0 0 0 1 0 2 1 1 3 0 2 0 0 1 0 13 1 1499.817 Q9NYZ3 Q9NYZ3 443 455 GTSE1 G2 and S phase-expressed protein 1 yes yes 3 0.0016839 74.392 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 59855000 11466000 6815000 11777000 4890600 2295200 22611000 8584 1564 8699 38575;38576;38577;38578;38579;38580 25526;25527;25528;25529;25530 25527 5 VMQQQQQTTQQQLPQK EPSAAIPKVMQQQQQT TQQQLPQKVQAQVIQE K V M Q K V 0 0 0 0 0 9 0 0 0 0 1 1 1 0 1 0 2 0 0 1 0 16 0 1940.9738 Q15459;F5H048 Q15459 116 131 SF3A1 Splicing factor 3A subunit 1 yes no 3 0.0079868 45.614 By matching By MS/MS By matching By matching By matching By matching 1 1 1917700 0 716390 0 0 1201300 0 8585 1138 8700 38581;38582 25531 25531 1 VMQTDESNKETANLQER SPSSSKLKVMQTDESN ETANLQERSISNDDGE K V M E R S 1 1 2 1 0 2 3 0 0 0 1 1 1 0 0 1 2 0 0 1 0 17 1 1991.9218 Q8NFC6;H0Y9Y2 Q8NFC6 2913 2929 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes no 3 0.0040054 49.343 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 11957000 1955600 1543700 2403100 1738400 1608700 2707800 8586 1325 8701 38583;38584;38585;38586;38587;38588 25532 25532 1 VMSNLVEHNGVLESEAGQPQALGSSGTCSSLK LKKRKKMRVMSNLVEH SGTCSSLKKQKLRAES R V M L K K 2 0 2 0 1 2 3 4 1 0 4 1 1 0 1 6 1 0 0 3 0 32 0 3285.5606 Q14684-2;Q14684 Q14684-2 583 614 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 3 1.1585E-227 146.34 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 2 2 1 265170000 51498000 90405000 0 61730000 0 61534000 8587 1111 8702;8703 38589;38590;38591;38592;38593;38594 25533;25534;25535;25536;25537;25538 25536 136 6 VMTHVSNGCQLLLGVKGHAF QVAQLKQKVMTHVSNG LGVKGHAF________ K V M A F - 1 0 1 0 1 1 0 3 2 0 3 1 1 1 0 1 1 0 0 3 0 20 1 2167.103 P17275 P17275 328 347 JUNB Transcription factor jun-B yes yes 4 0.00058053 58.427 By matching By matching By matching By MS/MS By matching By matching 2 13035000 0 0 0 13035000 0 0 8588 848 8704;8705 38595;38596 25539;25540 25540 90 2 VMVAPISGSVTTGTK STISPAQKVMVAPISG GSVTTGTKMVLTTKVG K V M T K M 1 0 0 0 0 0 0 2 0 1 0 1 1 0 1 2 3 0 0 3 0 15 0 1446.7752 Q12830-4;Q12830-2;Q12830 Q12830-4 2075 2089 BPTF Nucleosome-remodeling factor subunit BPTF yes no 2 0.0059771 51.771 By matching By matching By matching By matching By matching By MS/MS 1 1 2550800 0 901210 0 0 0 1649600 8589 1061 8706 38597;38598 25541 25541 1 VMYKGLVPEDK GLPPAMQKVMYKGLVP KGLVPEDKTLREIKVT K V M D K T 0 0 0 1 0 0 1 1 0 0 1 2 1 0 1 0 0 0 1 2 0 11 1 1277.669 H3BRL3;O14562;B3KW52;H3BUM8 H3BRL3 118 128 UBFD1 Ubiquitin domain-containing protein UBFD1 yes no 2;3 0.0043325 82.505 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 2 1 1 26558000 0 2627900 3083700 5241000 2548000 13057000 8590 644 8707 38599;38600;38601;38602;38603;38604 25542;25543;25544;25545;25546;25547 25544 6 VNCSFYFK IFGTEKDKVNCSFYFK VNCSFYFKIGACRHGD K V N F K I 0 0 1 0 1 0 0 0 0 0 0 1 0 2 0 1 0 0 1 1 0 8 0 1063.4797 Q01081-3;Q8WU68-3;Q8WU68-2;Q8WU68;Q01081-2;Q01081 Q01081-3 16 23 U2AF1;U2AF1L4 Splicing factor U2AF 35 kDa subunit;Splicing factor U2AF 26 kDa subunit yes no 2 0.012699 90.37 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 5481300 1625800 0 0 0 0 3855500 8591 1024 8708 38605;38606 25548;25549;25550 25548 3 VNGASVVMVQPSK GLGTGGQKVNGASVVM VVMVQPSKTATGPSTG K V N S K T 1 0 1 0 0 1 0 1 0 0 0 1 1 0 1 2 0 0 0 4 0 13 0 1314.6966 H0Y5I5;F8WCX2;Q8N1G0-2;Q8N1G0 H0Y5I5 68 80 ZNF687 Zinc finger protein 687 yes no 2 2.2058E-05 97.631 By matching By matching By matching By matching By matching By MS/MS 1 2341100 0 0 0 0 0 2341100 8592 568 8709 38607 25551 25551 1 VNGSTTAICATGLR TLNSKLLKVNGSTTAI AICATGLRNLGNTCFM K V N L R N 2 1 1 0 1 0 0 2 0 1 1 0 0 0 0 1 3 0 0 1 0 14 0 1419.714 Q6JHV3;H0YMI4;Q9Y6I4;B3KMX7;H0YLB7;H0YKU8;F5H1A6;H0YLG0 Q6JHV3 127 140 USP3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 3 yes no 2 2.444E-14 99.927 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 8593 628 8710 38608 25552 25552 1 VNIVPVIAK FMKAIHNKVNIVPVIA NIVPVIAKADTLTLKE K V N A K A 1 0 1 0 0 0 0 0 0 2 0 1 0 0 1 0 0 0 0 3 0 9 0 951.6117 C9J2Q4;H7C2Y0;B5MCX3;Q15019;Q15019-2;H7C310 C9J2Q4 135 143 SEPT2 Septin-2 yes no 2 0.020024 69.812 By matching By matching By matching By matching By matching By MS/MS 1 7112500 0 0 0 0 0 7112500 8594 172 8711 38609 25553 25553 1 VNNVNGNQVGHLK PYDKNAIKVNNVNGNQ GNQVGHLKKELAGALA K V N L K K 0 0 4 0 0 1 0 2 1 0 1 1 0 0 0 0 0 0 0 3 0 13 0 1391.727 Q14527;E7ESN4;F5H3D6 Q14527 100 112 HLTF Helicase-like transcription factor yes no 2;3 7.2469E-06 99.752 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 1 2 2 31916000 968070 5915000 4823200 788240 2473000 16948000 8595 1107 8712 38610;38611;38612;38613;38614;38615;38616;38617;38618;38619;38620 25554;25555;25556;25557;25558;25559;25560;25561 25561 8 VNNVNGNQVGHLKK PYDKNAIKVNNVNGNQ NQVGHLKKELAGALAY K V N K K E 0 0 4 0 0 1 0 2 1 0 1 2 0 0 0 0 0 0 0 3 0 14 1 1519.8219 Q14527;E7ESN4;F5H3D6 Q14527 100 113 HLTF Helicase-like transcription factor yes no 3 0.020542 39.394 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1708800 0 588280 293870 0 0 826650 8596 1107 8713 38621;38622;38623 25562 25562 1 VNPDLQVEVKPSIR HRLQYKKKVNPDLQVE VEVKPSIRARKIQEEK K V N I R A 0 1 1 1 0 1 1 0 0 1 1 1 0 0 2 1 0 0 0 3 0 14 1 1592.8886 Q96KR1;B5MEH6 Q96KR1 614 627 ZFR Zinc finger RNA-binding protein yes no 2;3 4.4139E-29 110.51 By MS/MS By MS/MS By matching By matching By matching By MS/MS 2 1 1 19914000 0 3478700 0 0 0 16435000 8597 1403 8714 38624;38625;38626;38627 25563;25564;25565;25566;25567;25568 25567 6 VNPHSLPDPEVNEQSSSK TSRQRQTRVNPHSLPD VNEQSSSKGMFRKKGG R V N S K G 0 0 2 1 0 1 2 0 1 0 1 1 0 0 3 4 0 0 0 2 0 18 0 1962.9283 Q99575;E5RK39 Q99575 61 78 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 3 3.75E-28 99.813 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 17627000 2576500 2312900 2408800 1363100 3980800 4985000 8598 1428 8715 38628;38629;38630;38631;38632;38633 25569;25570;25571;25572;25573;25574 25573 5 VNQCVIGTAQANRK NSLRFASKVNQCVIGT GTAQANRK________ K V N R K - 2 1 2 0 1 2 0 1 0 1 0 1 0 0 0 0 1 0 0 2 0 14 1 1557.8046 Q9BW19 Q9BW19 660 673 KIFC1 Kinesin-like protein KIFC1 yes yes 3 1.7871E-124 152.38 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 53708000 3308300 10744000 10817000 1877200 7488300 19474000 8599 1456 8716 38634;38635;38636;38637;38638;38639 25575;25576;25577 25575 3 VNQTQPEDTSGQQKPHPGER LPVQKLEKVNQTQPED QKPHPGERLKTGLLSR K V N E R L 0 1 1 1 0 4 2 2 1 0 0 1 0 0 3 1 2 0 0 1 0 20 1 2232.0519 Q5VYV7 Q5VYV7 243 262 SLX4IP Protein SLX4IP yes yes 4 0.023008 36.214 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2858900 0 721800 590990 0 0 1546100 8600 1211 8717 38640;38641;38642 25578;25579 25579 2 VNSLAPGPISGTEGLRR EWGPQNIRVNSLAPGP SGTEGLRRLGGPQASL R V N R R L 1 2 1 0 0 0 1 3 0 1 2 0 0 0 2 2 1 0 0 1 0 17 1 1722.9377 Q4VXZ8;Q9NUI1;Q9NUI1-3 Q4VXZ8 191 207 DECR2 Peroxisomal 2,4-dienoyl-CoA reductase yes no 3 0.013283 38.661 By MS/MS By matching By matching By matching By matching By matching 1 1670400 1670400 0 0 0 0 0 8601 1172 8718 38643 25580 25580 1 VNTLIRPDGEK LYDIDVAKVNTLIRPD LIRPDGEKKAYVRLAP K V N E K K 0 1 1 1 0 0 1 1 0 1 1 1 0 0 1 0 1 0 0 1 0 11 1 1240.6776 P62750;H7BY10;A8MXA8;A8MUS3 P62750 124 134 RPL23A 60S ribosomal protein L23a yes no 2;3 1.5247E-09 110.98 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 2 1 8174300 1284300 1351500 1246700 913640 2211900 1166200 8602 45 8719 38644;38645;38646;38647;38648;38649;38650 25581;25582;25583 25583 3 VPPPPPIAR RMYSYPARVPPPPPIA PPPPPIARAVVPSKRQ R V P A R A 1 1 0 0 0 0 0 0 0 1 0 0 0 0 5 0 0 0 0 1 0 9 0 942.56509 G3V576;G3V4W0;B4DY08;G3V4C1;P07910-2;B2R603;G3V2Q1;P07910;P07910-3;G3V555;G3V5V7;G3V575;G8JL89;G3V2D6;P07910-4 G3V576 143 151 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 2 0.010501 84.498 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2618700 584530 0 0 136230 596280 1301700 8603 68 8720 38651;38652;38653;38654 25584 25584 1 VPQVSTPTLVEVSR LIVRYTRKVPQVSTPT PTLVEVSRSLGKVGTR K V P S R S 0 1 0 0 0 1 1 0 0 0 1 0 0 0 2 2 2 0 0 4 0 14 0 1510.8355 CON__P02769;P02768;CON__P02768-1;E7ESU5;H0YA55;D6RHD5;B7WNR0;P02768-2;C9JKR2;Q8IUK7 CON__P02769 438 451 ALB Serum albumin no no 2 1.1816E-29 114.64 By matching By MS/MS By matching By matching By matching By matching 1 12798000 0 12798000 0 0 0 0 + 8604 294;293 8721 38655 25585 25585 1 VQAGDVITIDKATGK IESLTKDKVQAGDVIT TIDKATGKISKLGRSF K V Q G K I 2 0 0 2 0 1 0 2 0 2 0 2 0 0 0 0 2 0 0 2 0 15 1 1514.8304 Q9Y230;B3KQ59 Q9Y230 187 201 RUVBL2 RuvB-like 2 yes no 2;3 6.7601E-06 80.719 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 1 1 2 2 16577000 2427900 2155000 603920 249260 3251600 7889500 8605 1627 8722 38656;38657;38658;38659;38660;38661;38662;38663;38664 25586;25587;25588 25587 2 VQAINVSSRFEEEIK AKSFFEAKVQAINVSS SRFEEEIKAEQEERKK K V Q I K A 1 1 1 0 0 1 3 0 0 2 0 1 0 1 0 2 0 0 0 2 0 15 1 1747.9105 Q96C19 Q96C19 198 212 EFHD2 EF-hand domain-containing protein D2 yes yes 3 0.0032385 57.434 By matching By MS/MS By matching By matching By matching By matching 1 12391000 0 12391000 0 0 0 0 8606 1374 8723 38665 25589 25589 1 VQALEEANNDLENK RLASYLDKVQALEEAN ANNDLENKIQDWYDKK K V Q N K I 2 0 3 1 0 1 3 0 0 0 2 1 0 0 0 0 0 0 0 1 0 14 0 1585.7584 P35527;CON__P35527 P35527 171 184 KRT9 Keratin, type I cytoskeletal 9 yes no 2 5.327E-20 109.1 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 14673000 765630 9821000 4086200 0 0 0 + 8607 899 8724 38666;38667;38668 25590;25591 25590 1 VQALNTVNQSK SLEKIERRVQALNTVN LNTVNQSKKATPPIPS R V Q S K K 1 0 2 0 0 2 0 0 0 0 1 1 0 0 0 1 1 0 0 2 0 11 0 1200.6463 Q5TCZ1-2;F5GZJ6;F5GZ35;B7Z9C6;H0Y507;Q5TCZ1-3;Q5TCZ1 Q5TCZ1-2 740 750 SH3PXD2A SH3 and PX domain-containing protein 2A yes no 2 0.039251 48.568 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1001400 0 154800 0 0 252260 594300 8608 199 8725 38669;38670;38671 25592 25592 1 VQAQAEQGQQELK TLEGHLAKVQAQAEQG EQGQQELKNLRACVLE K V Q L K N 2 0 0 0 0 5 2 1 0 0 1 1 0 0 0 0 0 0 0 1 0 13 0 1455.7318 Q9BW19 Q9BW19 195 207 KIFC1 Kinesin-like protein KIFC1 yes yes 2 2.7789E-09 104.17 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 2386200 0 1305200 512660 0 568310 0 8609 1456 8726 38672;38673;38674 25593;25594 25594 2 VQENSAYICSR QVQQLLGKVQENSAYI NSAYICSRRQRVSFGV K V Q S R R 1 1 1 0 1 1 1 0 0 1 0 0 0 0 0 2 0 0 1 1 0 11 0 1325.6034 Q9Y3T9 Q9Y3T9 577 587 NOC2L Nucleolar complex protein 2 homolog yes yes 2 0.0039728 79.492 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 6774900 0 771970 796080 651190 1301100 3254500 8610 1648 8727 38675;38676;38677;38678;38679 25595;25596;25597 25597 3 VQENSAYICSRR QVQQLLGKVQENSAYI SAYICSRRQRVSFGVS K V Q R R Q 1 2 1 0 1 1 1 0 0 1 0 0 0 0 0 2 0 0 1 1 0 12 1 1481.7045 Q9Y3T9 Q9Y3T9 577 588 NOC2L Nucleolar complex protein 2 homolog yes yes 3 0.0062737 57.225 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 10804000 0 814550 862420 660860 3528500 4937500 8611 1648 8728 38680;38681;38682;38683;38684 25598;25599 25599 2 VQESTKGPDEAKIK QREKQGSKVQESTKGP GPDEAKIKALLERTGY K V Q I K A 1 0 0 1 0 1 2 1 0 1 0 3 0 0 1 1 1 0 0 1 0 14 2 1528.8097 O43390;O43390-2;E7ETM7;Q2L7G6 O43390 115 128 HNRNPR Heterogeneous nuclear ribonucleoprotein R yes no 3 0.003454 75.102 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 9922700 1210300 2309000 1271900 643500 2032100 2455900 8612 715 8729 38685;38686;38687;38688;38689;38690 25600;25601 25601 2 VQHVIHYQVPR ARGLDIPKVQHVIHYQ VIHYQVPRTSEIYVHR K V Q P R T 0 1 0 0 0 2 0 0 2 1 0 0 0 0 1 0 0 0 1 3 0 11 0 1374.7521 G3V529;Q9GZR7;F5H4J5;Q4V9L5;F5GYL3;F5H4V3 G3V529 613 623 DDX24 ATP-dependent RNA helicase DDX24 yes no 3 1.2072E-05 105.17 By MS/MS By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 30727000 3265900 4466400 0 0 14306000 8689000 8613 588 8730 38691;38692;38693;38694 25602;25603;25604;25605 25603 4 VQIFEYNENTRK SSPNAMAKVQIFEYNE EYNENTRKYAKAETLM K V Q R K Y 0 1 2 0 0 1 2 0 0 1 0 1 0 1 0 0 1 0 1 1 0 12 1 1539.7682 Q96EE3;Q96EE3-1 Q96EE3 197 208 SEH1L Nucleoporin SEH1 yes no 3 0.00093703 80.834 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 7913400 0 1100500 1172300 714540 1282500 3643500 8614 1380 8731 38695;38696;38697;38698;38699 25606;25607;25608 25606 3 VQISPDSGGLPER IQQDSGCKVQISPDSG DSGGLPERSVSLTGAP K V Q E R S 0 1 0 1 0 1 1 2 0 1 1 0 0 0 2 2 0 0 0 1 0 13 0 1353.6888 Q92945-2;Q92945;E7EP96 Q92945-2 178 190 KHSRP Far upstream element-binding protein 2 yes no 2 0.001732 81.239 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 1 210460000 19058000 249240 20515000 18801000 30616000 121220000 8615 1366 8732 38700;38701;38702;38703;38704;38705 25609;25610;25611 25611 3 VQISPDSGGLPERSVSLTGAPESVQK IQQDSGCKVQISPDSG GAPESVQKAKMMLDDI K V Q Q K A 1 1 0 1 0 2 2 3 0 1 2 1 0 0 3 5 1 0 0 3 0 26 1 2637.361 Q92945-2;Q92945;E7EP96 Q92945-2 178 203 KHSRP Far upstream element-binding protein 2 yes no 3 1.4257E-79 115.01 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 1728500000 341740000 0 439520000 273180000 46264000 627800000 8616 1366 8733 38706;38707;38708;38709;38710;38711 25612;25613;25614;25615;25616;25617;25618 25612 7 VQISPDSGGLPERSVSLTGAPESVQKAK IQQDSGCKVQISPDSG PESVQKAKMMLDDIVS K V Q A K M 2 1 0 1 0 2 2 3 0 1 2 2 0 0 3 5 1 0 0 3 0 28 2 2836.4931 Q92945-2;Q92945;E7EP96 Q92945-2 178 205 KHSRP Far upstream element-binding protein 2 yes no 3;4 2.3218E-92 114.75 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 2 3 2 7183200000 513580000 4613400000 709320000 559240000 81165000 706510000 8617 1366 8734 38712;38713;38714;38715;38716;38717;38718;38719;38720;38721;38722;38723;38724;38725 25619;25620;25621;25622;25623;25624;25625;25626;25627;25628;25629;25630;25631;25632;25633 25619 15 VQMTSPSSTGSPMFK SSQALTNKVQMTSPSS STGSPMFKFSSPIVKS K V Q F K F 0 0 0 0 0 1 0 1 0 0 0 1 2 1 2 4 2 0 0 1 0 15 0 1583.7324 P49790;F6QR24;Q4LE47 P49790 512 526 NUP153;NUP153 variant protein Nuclear pore complex protein Nup153 yes no 2 0.00050129 83.692 By MS/MS By matching By MS/MS By matching By MS/MS By matching 1 1 1 7624400 3279700 0 3511000 0 833750 0 8618 531 8735 38726;38727;38728 25634;25635;25636 25634 3 VQQSSESSTSSPSQHEATPGAR IKLEKALRVQQSSESS HEATPGARRLLRITKR R V Q A R R 2 1 0 0 0 3 2 1 1 0 0 0 0 0 2 7 2 0 0 1 0 22 0 2257.0207 B4DLG2;O75152;E9PQ61;E9PBY7 B4DLG2 431 452 ZC3H11A Zinc finger CCCH domain-containing protein 11A yes no 3 0.011088 37.884 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 3664000 464060 587020 564870 323910 746410 977750 8619 97 8736 38729;38730;38731;38732;38733;38734 25637;25638;25639;25640;25641 25640 5 VQRGECQTTIQGQAR SKKKMRQKVQRGECQT TTIQGQARNKRKQETK K V Q A R N 1 2 0 0 1 4 1 2 0 1 0 0 0 0 0 0 2 0 0 1 0 15 1 1730.8482 H0YII3;Q9UIF9-2;Q9UIF9-3;F8VU39;Q9UIF9 H0YII3 147 161 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A yes no 3 0.00086263 77.24 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 4017900 595660 0 0 860940 1111400 1449900 8620 540 8737 38735;38736;38737;38738 25642 25642 1 VQSNTTSELSRGHLSK KSNSKAPKVQSNTTSE LSRGHLSKRSCSSSSA K V Q S K R 0 1 1 0 0 1 1 1 1 0 2 1 0 0 0 4 2 0 0 1 0 16 1 1742.8911 Q14CA3;B4DYJ6;G5E9G6;C9JLD7 Q14CA3 59 74 TRIP12 E3 ubiquitin-protein ligase TRIP12 yes no 3;4 0.009291 45.992 By MS/MS By matching By matching By matching By matching By MS/MS 3 1 1 1 1 11177000 3871300 1696700 2384800 1939700 0 1284600 8621 1122 8738 38739;38740;38741;38742;38743;38744;38745 25643;25644;25645 25643 3 VQTAVTMKGVTK RVDAVASKVQTAVTMK VTMKGVTKNMAQVTKA K V Q T K N 1 0 0 0 0 1 0 1 0 0 0 2 1 0 0 0 3 0 0 3 0 12 1 1261.7064 F8VUA2;Q9HD42;F5H875 F8VUA2 76 87 CHMP1A Charged multivesicular body protein 1a yes no 2;3 5.748E-05 99.732 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 1 2 2 2 2 106570000 11436000 11868000 14317000 9702000 25366000 33886000 8622 541 8739 38746;38747;38748;38749;38750;38751;38752;38753;38754;38755;38756;38757 25646;25647;25648;25649;25650;25651;25652;25653 25651 8 VQVEYKGETK VNDAGRPKVQVEYKGE VEYKGETKSFYPEEVS K V Q T K S 0 0 0 0 0 1 2 1 0 0 0 2 0 0 0 0 1 0 1 2 0 10 1 1179.6136 P11142;E9PKE3;P11142-2;E9PN89;E9PLF4;E9PQQ4;E9PQK7;E9PK54;E9PPY6;E9PN25;P54652 P11142 103 112 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 yes no 2 0.024163 76.228 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 4987300 347420 1212400 2834400 320080 0 272920 8623 824 8740 38758;38759;38760;38761;38762 25654 25654 1 VQVKEEPSAVK HLRTRVQKVQVKEEPS KEEPSAVKFTQTSGET K V Q V K F 1 0 0 0 0 1 2 0 0 0 0 2 0 0 1 1 0 0 0 3 0 11 1 1212.6714 P46013;F5H4V4;P46013-2 P46013 2731 2741 MKI67 Antigen KI-67 no no 2;3 1.7036E-69 147.28 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 2 2 1 2 2 149630000 12053000 20578000 32223000 5952100 10836000 67992000 8624 919;920 8741 38763;38764;38765;38766;38767;38768;38769;38770;38771;38772;38773;38774 25655;25656;25657;25658;25659;25660;25661;25662;25663;25664;25665 25659 11 VQVLDNQNVSNGCVSK LQTHADAKVQVLDNQN VSNGCVSKILGRYYET K V Q S K I 0 0 3 1 1 2 0 1 0 0 1 1 0 0 0 2 0 0 0 4 0 16 0 1759.8523 P26367-2 P26367-2 54 69 PAX6 Paired box protein Pax-6 yes yes 2 2.2983E-18 105.02 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 15042000 0 4040300 4267200 734640 682120 5317900 8625 878 8742 38775;38776;38777;38778;38779 25666;25667;25668 25668 3 VQVQDVVLK SSLPRRAKVQVQDVVL QVQDVVLKDEFSSFSE K V Q L K D 0 0 0 1 0 2 0 0 0 0 1 1 0 0 0 0 0 0 0 4 0 9 0 1026.6073 Q8N5C6 Q8N5C6 10 18 SRBD1 S1 RNA-binding domain-containing protein 1 yes yes 2 4.0861E-29 131.5 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 37068000 5448700 6408100 5461700 2677700 4396600 12675000 8626 1302 8743 38780;38781;38782;38783;38784;38785 25669;25670;25671;25672;25673;25674 25673 6 VRAQPSGPSQPHVCGFCGK VPMAPRPRVRAQPSGP HVCGFCGKEFPRSSDL R V R G K E 1 1 0 0 2 2 0 3 1 0 0 1 0 1 3 2 0 0 0 2 0 19 1 2067.9731 Q96MX3 Q96MX3 532 550 ZNF48 Zinc finger protein 48 yes yes 3 0.007825 43.208 By matching By matching By matching By MS/MS By matching By matching 1 1 1 4805200 0 0 882360 1533900 2388900 0 8627 1408 8744 38786;38787;38788 25675 25675 1 VRDPWGNWCDAK SMRTRRRRVRDPWGNW WGNWCDAKDLEGQTFE R V R A K D 1 1 1 2 1 0 0 1 0 0 0 1 0 0 1 0 0 2 0 1 0 12 1 1502.6725 Q5VVJ2;Q5VVJ2-2 Q5VVJ2 505 516 MYSM1 Histone H2A deubiquitinase MYSM1 yes no 3 0.0020005 87.719 By matching By matching By matching By matching By matching By MS/MS 1 4176000 0 0 0 0 0 4176000 8628 1207 8745 38789 25676 25676 1 VREEEIEVDSR RASSPFRRVREEEIEV EEIEVDSRVADNSFDA R V R S R V 0 2 0 1 0 0 4 0 0 1 0 0 0 0 0 1 0 0 0 2 0 11 1 1359.663 Q14978;Q14978-3;Q14978-2 Q14978 628 638 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 3 0.00091419 93.839 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 51866000 7162000 5548100 1245500 982330 24341000 12587000 8629 1120 8746 38790;38791;38792;38793;38794;38795 25677;25678;25679;25680;25681 25677 5 VREEEIEVDSRVADNSFDAK RASSPFRRVREEEIEV ADNSFDAKRGAAGDWG R V R A K R 2 2 1 3 0 0 4 0 0 1 0 1 0 1 0 2 0 0 0 3 0 20 2 2307.0979 Q14978;Q14978-3;Q14978-2 Q14978 628 647 NOLC1 Nucleolar and coiled-body phosphoprotein 1 yes no 3;4 2.5857E-06 87.157 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 2 1 2 2 1 60580000 38198000 2793800 12054000 0 4352600 3181100 8630 1120 8747 38796;38797;38798;38799;38800;38801;38802;38803 25682;25683;25684;25685;25686;25687;25688 25685 7 VRELISDNQYR DQGIYQSKVRELISDN LISDNQYRLIVNVNDL K V R Y R L 0 2 1 1 0 1 1 0 0 1 1 0 0 0 0 1 0 0 1 1 0 11 1 1391.7157 P25205 P25205 36 46 MCM3 DNA replication licensing factor MCM3 yes yes 3 0.036524 49.632 By matching By MS/MS By matching By matching By matching By matching 1 1 2100600 472650 1627900 0 0 0 0 8631 873 8748 38804;38805 25689 25689 1 VREQSVQEIPVSR ILGAHNEKVREQSVQE VQEIPVSRLFREPSQA K V R S R L 0 2 0 0 0 2 2 0 0 1 0 0 0 0 1 2 0 0 0 3 0 13 1 1525.8213 CON__P06868 CON__P06868 646 658 yes yes 2;3 2.441E-34 122.78 By MS/MS By matching By matching By matching By MS/MS By MS/MS 2 2 2 1 1 2 61053000 4856900 7668500 1278100 1545600 15116000 30588000 + 8632 295 8749 38806;38807;38808;38809;38810;38811;38812;38813;38814;38815 25690;25691;25692;25693 25691 3 VRFATHAAALSVR PMRGRQLRVRFATHAA HAAALSVRNLSPYVSN R V R V R N 4 2 0 0 0 0 0 0 1 0 1 0 0 1 0 1 1 0 0 2 0 13 1 1397.7892 P23246;P23246-2 P23246 364 376 SFPQ Splicing factor, proline- and glutamine-rich yes no 3 0.012368 53.377 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 3536500 1596700 0 0 0 1939800 0 8633 865 8750 38816;38817 25694;25695 25694 2 VRFLEQQNQVLQTK KFASFIDKVRFLEQQN QNQVLQTKWELLQQMN K V R T K W 0 1 1 0 0 4 1 0 0 0 2 1 0 1 0 0 1 0 0 2 0 14 1 1729.9475 P35908;CON__P35908;CON__Q6NXH9;CON__Q6IFZ6;Q7Z794;CON__Q7Z794;P04264;CON__P04264 P35908 196 209 KRT2;KRT77;KRT1 Keratin, type II cytoskeletal 2 epidermal;Keratin, type II cytoskeletal 1b;Keratin, type II cytoskeletal 1 no no 3 0.029559 41.542 By matching By MS/MS By matching By matching By matching By matching 1 1474800 0 1474800 0 0 0 0 + 8634 302;789 8751 38818 25696 25696 1 VRGLPWSCSADEVQR GGEGFVVKVRGLPWSC CSADEVQRFFSDCKIQ K V R Q R F 1 2 0 1 1 1 1 1 0 0 1 0 0 0 1 2 0 1 0 2 0 15 1 1758.8472 D6RBM0;E9PCY7;P31943;G8JLB6;D6RIU0;D6RAM1;D6R9T0;D6RFM3;D6RIT2;D6RDU3;D6RJ04;D6RIH9;E7EQJ0;E5RGV0;E7EN40;D6RDL0;D6RF17;D6R9D3 D6RBM0 15 29 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 3 6.0251E-05 89.466 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 1 2 1 2 16136000 0 3018700 5614900 1577300 2479100 3445600 8635 322 8752 38819;38820;38821;38822;38823;38824;38825;38826 25697;25698;25699;25700;25701 25701 5 VRHAQSGTIMAVK GAYGVVEKVRHAQSGT SGTIMAVKRIRATVNS K V R V K R 2 1 0 0 0 1 0 1 1 1 0 1 1 0 0 1 1 0 0 2 0 13 1 1396.7609 P46734;P46734-2;F8W9D9;P46734-3;E9PRZ0 P46734 81 93 MAP2K3 Dual specificity mitogen-activated protein kinase kinase 3 yes no 3 1.543E-34 121.45 By matching By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 8231300 0 1031000 1714700 842510 1708900 2934200 8636 925 8753 38827;38828;38829;38830;38831 25702;25703;25704 25704 3 VRIQTQPGYANTLRDAAPK LAPMEAAKVRIQTQPG TLRDAAPKMYKEEGLK K V R P K M 3 2 1 1 0 2 0 1 0 1 1 1 0 0 2 0 2 0 1 1 0 19 2 2098.1283 F8VVM2;Q00325-2;Q00325 F8VVM2 187 205 SLC25A3 Phosphate carrier protein, mitochondrial yes no 3;4 0.0012872 54.355 By matching By matching By matching By matching By MS/MS By matching 1 2 2 2 2 29844000 1420500 2856700 0 2001900 14336000 9228700 8637 545 8754 38832;38833;38834;38835;38836;38837;38838;38839;38840 25705;25706 25706 2 VRPCVVYGGADIGQQIR RKFSYRSRVRPCVVYG ADIGQQIRDLERGCHL R V R I R D 1 2 0 1 1 2 0 3 0 2 0 0 0 0 1 0 0 0 1 3 0 17 1 1886.9785 O00571;O00571-2;B4DLU5;B4DXX7;O15523 O00571 295 311 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y yes no 3 4.9444E-210 165.58 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 135230000 13146000 18977000 15880000 1710100 5598500 79916000 8638 693 8755 38841;38842;38843;38844;38845;38846 25707;25708;25709;25710;25711;25712 25709 6 VRPLLPSELER EKVKVYLRVRPLLPSE LLPSELERQEDQGCVR R V R E R Q 0 2 0 0 0 0 2 0 0 0 3 0 0 0 2 1 0 0 0 1 0 11 1 1307.7561 O95235;D6R9E4;D6RBN1 O95235 71 81 KIF20A Kinesin-like protein KIF20A yes no 3 0.0068094 69.721 By matching By matching By matching By matching By matching By MS/MS 1 3368200 0 0 0 0 0 3368200 8639 767 8756 38847 25713 25713 1 VRPSTGNSASTPQSQCLPSEIEVK KALSKTSKVRPSTGNS LPSEIEVKYKMAECYT K V R V K Y 1 1 1 0 1 2 2 1 0 1 1 1 0 0 3 5 2 0 0 2 0 24 1 2571.2599 Q9UJX3-2;Q9UJX3;F8VYX8 Q9UJX3-2 116 139 ANAPC7 Anaphase-promoting complex subunit 7 yes no 3 0.036403 30.767 By matching By matching By matching By matching By matching By MS/MS 1 2019700 0 0 0 0 0 2019700 8640 1599 8757 38848 25714 25714 1 VRPSTGNSASTPQSQCLPSEIEVKYK KALSKTSKVRPSTGNS SEIEVKYKMAECYTML K V R Y K M 1 1 1 0 1 2 2 1 0 1 1 2 0 0 3 5 2 0 1 2 0 26 2 2862.4182 Q9UJX3-2;Q9UJX3;F8VYX8 Q9UJX3-2 116 141 ANAPC7 Anaphase-promoting complex subunit 7 yes no 4 2.3002E-65 112.26 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 19060000 0 0 16088000 0 2972300 0 8641 1599 8758 38849;38850 25715;25716 25715 2 VRQQAADLISR RLNNKSAKVRQQAADL QAADLISRTAVVMKTC K V R S R T 2 2 0 1 0 2 0 0 0 1 1 0 0 0 0 1 0 0 0 1 0 11 1 1255.6997 O75533 O75533 947 957 SF3B1 Splicing factor 3B subunit 1 yes yes 3 0.00049202 96.067 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 7601000 505410 1461400 528970 346660 1847600 2910900 8642 746 8759 38851;38852;38853;38854;38855;38856 25717;25718;25719 25717 3 VRQTQVNEATKAR LGKSGSGRVRQTQVNE VNEATKARISKTLQRT R V R A R I 2 2 1 0 0 2 1 0 0 0 0 1 0 0 0 0 2 0 0 2 0 13 2 1499.8168 Q8WWY3;E7EVX8 Q8WWY3 407 419 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes no 3 0.0042614 75.911 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 3616100 0 814750 2244500 280450 0 276360 8643 1342 8760 38857;38858;38859;38860 25720 25720 1 VRTVVSGSCAAHSLLITTEGK YGCLAGVRVRTVVSGS LLITTEGKLWSWGRNE R V R G K L 2 1 0 0 1 0 1 2 1 1 2 1 0 0 0 3 3 0 0 3 0 21 1 2185.1525 Q9P258 Q9P258 150 170 RCC2 Protein RCC2 yes yes 3;4 1.1078E-186 154.72 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 2 3 2 2 2 170460000 75576000 9555300 39351000 10296000 0 35676000 8644 1575 8761 38861;38862;38863;38864;38865;38866;38867;38868;38869;38870;38871 25721;25722;25723;25724;25725;25726;25727;25728;25729;25730 25730 10 VRWEFCNLKK WCYTTDPRVRWEFCNL WEFCNLKKCSETPEQV R V R K K C 0 1 1 0 1 0 1 0 0 0 1 2 0 1 0 0 0 1 0 1 0 10 2 1378.718 CON__P06868 CON__P06868 451 460 yes yes 3 0.0027908 105.17 By MS/MS By matching By matching By matching By matching By matching 1 3054500 3054500 0 0 0 0 0 + 8645 295 8762 38872 25731 25731 1 VRYSLDPENPTK ________________ LDPENPTKSCKSRGSN M V R T K S 0 1 1 1 0 0 1 0 0 0 1 1 0 0 2 1 1 0 1 1 0 12 1 1417.7201 P18621 P18621 2 13 RPL17 60S ribosomal protein L17 yes yes 3 0.0050036 64.534 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 70687000 14456000 6108400 6633800 16321000 23346000 3822600 8646 855 8763 38873;38874;38875;38876;38877;38878 25732;25733;25734;25735;25736;25737 25732 6 VRYSLDPENPTKSCK ________________ ENPTKSCKSRGSNLRV M V R C K S 0 1 1 1 1 0 1 0 0 0 1 2 0 0 2 2 1 0 1 1 0 15 2 1792.8778 P18621 P18621 2 16 RPL17 60S ribosomal protein L17 yes yes 3;4 0.0026045 58.116 By MS/MS By matching By matching By MS/MS By matching By MS/MS 2 2 2 2 1 2 19088000 6485100 1454000 2547500 4402300 2147200 2051800 8647 855 8764 38879;38880;38881;38882;38883;38884;38885;38886;38887;38888;38889 25738;25739;25740;25741 25740 3 VSAGNENACLTTK KQSGLLCKVSAGNENA ENACLTTKHLTALGKL K V S T K H 2 0 2 0 1 0 1 1 0 0 1 1 0 0 0 1 2 0 0 1 0 13 0 1363.6402 Q5VYS8-6;Q5VYS8;Q5VYT0;Q5VYS8-3;Q5VYS8-2 Q5VYS8-6 409 421 ZCCHC6 Terminal uridylyltransferase 7 yes no 2 0.013519 52.527 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 2985400 0 490550 387290 218910 575770 1312900 8648 1210 8765 38890;38891;38892;38893;38894 25742 25742 1 VSAQGITLTDNQRK TPAVVHFKVSAQGITL TLTDNQRKLFFRRHYP K V S R K L 1 1 1 1 0 2 0 1 0 1 1 1 0 0 0 1 2 0 0 1 0 14 1 1529.8162 B3KYA3;Q59G71;F5GXX8;Q68CZ2-2;E7ERH3;Q63HR2-5;Q63HR2-2;F8VV64;C9JVR1;Q63HR2-6;Q63HR2;Q63HR2-4;Q68CZ2;E9PGF5;E9PF55;Q9HBL0 B3KYA3 690 703 TNS1;TNS3;TENC1 Tensin-3;Tensin-like C1 domain-containing phosphatase;Tensin-1 yes no 3 0.001045 65.809 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 9645500 0 988580 2650000 0 3184700 2822200 8649 79 8766 38895;38896;38897;38898 25743;25744;25745;25746 25746 4 VSASSPSLAVASQSDSKQR LRGGATVKVSASSPSL SQSDSKQRRLLVDFPK K V S Q R R 3 1 0 1 0 2 0 0 0 0 1 1 0 0 1 7 0 0 0 2 0 19 1 1903.9599 P04150-7;P04150-5;F8W959;P04150-9;P04150-2;P04150-6;P04150-8;P04150-10;P04150;P04150-3;D6RDA9;Q3MSN4 P04150-7 41 59 NR3C1 Glucocorticoid receptor yes no 3 0.0031304 49.535 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1477100 0 0 0 242930 535370 698800 8650 561 8767 38899;38900;38901 25747;25748 25748 2 VSASSPSLAVASQSDSKQRR LRGGATVKVSASSPSL QSDSKQRRLLVDFPKG K V S R R L 3 2 0 1 0 2 0 0 0 0 1 1 0 0 1 7 0 0 0 2 0 20 2 2060.061 P04150-7;P04150-5;F8W959;P04150-9;P04150-2;P04150-6;P04150-8;P04150-10;P04150;P04150-3;D6RDA9;Q3MSN4 P04150-7 41 60 NR3C1 Glucocorticoid receptor yes no 4 0.01136 40.014 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 2756000 0 0 1162200 0 809160 784640 8651 561 8768 38902;38903;38904 25749;25750;25751 25749 3 VSAVPTNMAAK LNSTSNTKVSAVPTNM VPTNMAAKKTSTPKIN K V S A K K 3 0 1 0 0 0 0 0 0 0 0 1 1 0 1 1 1 0 0 2 0 11 0 1087.5696 Q96KR1;B5MEH6 Q96KR1 485 495 ZFR Zinc finger RNA-binding protein yes no 2 0.00023773 98.898 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 2 200960000 41076000 25261000 31769000 24582000 35510000 42761000 8652 1403 8769;8770 38905;38906;38907;38908;38909;38910;38911;38912 25752;25753;25754;25755;25756;25757;25758;25759 25758 163 8 VSAVPTNMAAKK LNSTSNTKVSAVPTNM PTNMAAKKTSTPKINF K V S K K T 3 0 1 0 0 0 0 0 0 0 0 2 1 0 1 1 1 0 0 2 0 12 1 1215.6645 Q96KR1;B5MEH6 Q96KR1 485 496 ZFR Zinc finger RNA-binding protein yes no 3 0.0021318 65.695 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 5892100 429750 719070 0 566850 1895400 2281000 8653 1403 8771 38913;38914;38915;38916;38917 25760;25761;25762 25760 3 VSDFGLTK VSEDNVAKVSDFGLTK VSDFGLTKEASSTQDT K V S T K E 0 0 0 1 0 0 0 1 0 0 1 1 0 1 0 1 1 0 0 1 0 8 0 865.45453 P41240;E7EQW6 P41240 330 337 CSK Tyrosine-protein kinase CSK yes no 2 0.00941 101.25 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 27107000 0 3397700 6026800 0 4039900 13643000 8654 912 8772 38918;38919;38920;38921 25763 25763 1 VSDHIQWFNK SQMTEHRKVSDHIQWF DHIQWFNKLSLNEPNR K V S N K L 0 0 1 1 0 1 0 0 1 1 0 1 0 1 0 1 0 1 0 1 0 10 0 1272.6251 B4DZN9;Q6P4F7 B4DZN9 618 627 ARHGAP11A Rho GTPase-activating protein 11A yes no 3 0.020196 60.102 By matching By matching By matching By matching By matching By MS/MS 1 1 1830300 0 556360 0 0 0 1273900 8655 147 8773 38922;38923 25764 25764 1 VSEEAESQQQWDTSK PSPEPSTKVSEEAESQ QQQWDTSKGEQVSQNG K V S S K G 1 0 0 1 0 3 3 0 0 0 0 1 0 0 0 3 1 1 0 1 0 15 0 1750.7646 Q01082-3;Q01082-2;Q01082 Q01082-3 2096 2110 SPTBN1 Spectrin beta chain, non-erythrocytic 1 yes no 2 0.023083 41.359 By matching By matching By matching By matching By matching By MS/MS 1 1 1552300 0 767840 0 0 0 784450 8656 1025 8774 38924;38925 25765 25765 1 VSEFNVSSEGSGEK ERSEASLKVSEFNVSS SSEGSGEKLVLADLLE K V S E K L 0 0 1 0 0 0 3 2 0 0 0 1 0 1 0 4 0 0 0 2 0 14 0 1454.6525 E9PEL7;Q9BVJ6 E9PEL7 71 84 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A yes no 2 6.5805E-08 98.582 By matching By matching By matching By matching By matching By MS/MS 1 1 1 3047900 0 998480 383190 0 0 1666200 8657 425 8775 38926;38927;38928 25766 25766 1 VSELKEELK PVNVKKLKVSELKEEL SELKEELKKRRLSDKG K V S L K K 0 0 0 0 0 0 3 0 0 0 2 2 0 0 0 1 0 0 0 1 0 9 1 1073.5968 Q00839;B3KX72;Q00839-2 Q00839 13 21 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 2 0.0018449 109.83 By matching By matching By matching By matching By matching By MS/MS 1 1 3668100 0 0 0 682180 0 2986000 8658 1022;1023 8776 38929;38930 25767 25767 1 VSELKEELKK PVNVKKLKVSELKEEL ELKEELKKRRLSDKGL K V S K K R 0 0 0 0 0 0 3 0 0 0 2 3 0 0 0 1 0 0 0 1 0 10 2 1201.6918 Q00839;B3KX72;Q00839-2 Q00839 13 22 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 3 0.0027504 105.2 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 2 1 24768000 3784300 3753500 5139000 2276200 3613500 6201600 8659 1022;1023 8777 38931;38932;38933;38934;38935;38936;38937 25768;25769;25770;25771 25768 4 VSFPETPK ESPQLGGKVSFPETPK VSFPETPKSDSQTPSP K V S P K S 0 0 0 0 0 0 1 0 0 0 0 1 0 1 2 1 1 0 0 1 0 8 0 903.47018 Q9NYD6;D6RAG4 Q9NYD6 196 203 HOXC10 Homeobox protein Hox-C10 yes no 2 0.011726 91.069 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 23565000 643110 4300600 2821800 1669300 3848000 10282000 8660 1562 8778 38938;38939;38940;38941;38942;38943 25772;25773 25773 2 VSGGEDADKARASPSVTCK SFSPYGSKVSGGEDAD ASPSVTCKSSSESKAL K V S C K S 3 1 0 2 1 0 1 2 0 0 0 2 0 0 1 3 1 0 0 2 0 19 2 1933.9164 O15014 O15014 1273 1291 ZNF609 Zinc finger protein 609 yes yes 4 0.017814 37.438 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 2678000 0 496050 704860 0 548590 928510 8661 701 8779 38944;38945;38946;38947 25774;25775;25776 25774 3 VSGNPQVHIK YSKITEGKVSGNPQVH GNPQVHIKNVKEDSTA K V S I K N 0 0 1 0 0 1 0 1 1 1 0 1 0 0 1 1 0 0 0 2 0 10 0 1077.5931 P46013;F5H4V4 P46013 151 160 MKI67 Antigen KI-67 yes no 2 0.0093219 76.228 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 10105000 1245300 2940700 3960500 520940 0 1437900 8662 919 8780 38948;38949;38950;38951;38952 25777;25778;25779 25778 3 VSGNPQVHIKNVK YSKITEGKVSGNPQVH QVHIKNVKEDSTADDS K V S V K E 0 0 2 0 0 1 0 1 1 1 0 2 0 0 1 1 0 0 0 3 0 13 1 1418.7994 P46013;F5H4V4 P46013 151 163 MKI67 Antigen KI-67 yes no 3 0.001312 89.805 By MS/MS By MS/MS By MS/MS By MS/MS By matching By matching 1 1 1 1 1 4643800 486000 939220 1707100 798540 0 712900 8663 919 8781 38953;38954;38955;38956;38957 25780;25781;25782;25783 25782 4 VSGQVQALQNHYRK RHVVQRQRVSGQVQAL ALQNHYRKYLCLLASD R V S R K Y 1 1 1 0 0 3 0 1 1 0 1 1 0 0 0 1 0 0 1 2 0 14 1 1626.859 O00411 O00411 519 532 POLRMT DNA-directed RNA polymerase, mitochondrial yes yes 3 0.027719 36.631 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1546200 0 505070 0 206450 0 834720 8664 690 8782 38958;38959;38960 25784 25784 1 VSGSAAKPRPYACPLCPK AEEASGEKVSGSAAKP YACPLCPKAYKTAPEL K V S P K A 3 1 0 0 2 0 0 1 0 0 1 2 0 0 4 2 0 0 1 1 0 18 2 1957.9866 Q96K58;C9JHH8;C9JG35;C9JCJ0 Q96K58 74 91 ZNF668 Zinc finger protein 668 yes no 4 0.027906 35.473 By MS/MS By matching By matching By matching By matching By matching 1 1422100 1422100 0 0 0 0 0 8665 1401 8783 38961 25785 25785 1 VSGVKPKYNSGALHIK PFQFYLTRVSGVKPKY NSGALHIKDILSPLFG R V S I K D 1 0 1 0 0 0 0 2 1 1 1 3 0 0 1 2 0 0 1 2 0 16 2 1696.9624 G3V2F4;E7EPD8;Q9NUW8;G3V2J6;G3V2U6;Q9BRS7;G3V4W8;G3V5H9 G3V2F4 171 186 TDP1 Tyrosyl-DNA phosphodiesterase 1 yes no 4 0.020707 40.211 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3678800 0 539010 902030 0 816950 1420800 8666 357 8784 38962;38963;38964;38965 25786 25786 1 VSHIDVITAEMAK YGVKFRNKVSHIDVIT VITAEMAKDFVEDDTT K V S A K D 2 0 0 1 0 0 1 0 1 2 0 1 1 0 0 1 1 0 0 2 0 13 0 1412.7334 Q9UQE7 Q9UQE7 1195 1207 SMC3 Structural maintenance of chromosomes protein 3 yes yes 3 0.028287 43.297 By matching By matching By matching By matching By matching By MS/MS 1 1 1 5111400 0 1187700 0 770060 0 3153600 8667 1625 8785 38966;38967;38968 25787 25787 1 VSHSPALSSDVR AVPDSGSKVSHSPALS PALSSDVRSTNGTAEC K V S V R S 1 1 0 1 0 0 0 0 1 0 1 0 0 0 1 4 0 0 0 2 0 12 0 1253.6364 Q68CP9-3;Q68CP9;F8VWP4;Q68CP9-2;E7ENG3;F8W108;F8WCU9 Q68CP9-3 1493 1504 ARID2 AT-rich interactive domain-containing protein 2 yes no 3 0.013026 54.343 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 6930400 596280 778760 1181300 437840 1953000 1983200 8668 1215 8786 38969;38970;38971;38972;38973;38974 25788;25789;25790 25790 3 VSIPVDATESEPK EKDCNLKKVSIPVDAT DATESEPKSFIFMSED K V S P K S 1 0 0 1 0 0 2 0 0 1 0 1 0 0 2 2 1 0 0 2 0 13 0 1370.6929 Q8WUF8-3;Q8WUF8;Q8WUF8-2;E9PBM2 Q8WUF8-3 76 88 FAM172A Protein FAM172A yes no 2 0.031237 68.463 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 8669 1341 8787 38975 25791 25791 1 VSIQPLDETAVTDKENNLHESEYGDQEGK STDCVSNKVSIQPLDE EYGDQEGKRLVDTDVA K V S G K R 1 0 2 3 0 2 5 2 1 1 2 2 0 0 1 2 2 0 1 2 0 29 1 3244.5008 Q9UQ84-4;Q9UQ84 Q9UQ84-4 520 548 EXO1 Exonuclease 1 yes no 4 4.4364E-13 64.707 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 66854000 0 38368000 8744000 0 0 19742000 8670 1624 8788 38976;38977;38978 25792;25793;25794 25794 3 VSIVNQYGK GEESMAARVSIVNQYG SIVNQYGKCVYDKYVK R V S G K C 0 0 1 0 0 1 0 1 0 1 0 1 0 0 0 1 0 0 1 2 0 9 0 1006.5447 Q9GZR2 Q9GZR2 265 273 REXO4 RNA exonuclease 4 yes yes 2 0.031556 63.816 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 7294700 799220 925650 1973400 0 2314400 1282000 8671 1474 8789 38979;38980;38981;38982;38983 25795 25795 1 VSKDPSSYVKLSVGK LSRFARNKVSKDPSSY YVKLSVGKKTHTSKTC K V S G K K 0 0 0 1 0 0 0 1 0 0 1 3 0 0 1 4 0 0 1 3 0 15 2 1592.8774 A0FGR9 A0FGR9 481 495 ESYT3 Extended synaptotagmin-3 yes yes 2;3 4.5114E-07 96.371 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 2 1 248910000 53097000 144700000 0 51110000 0 0 8672 1 8790 38984;38985;38986;38987 25796;25797;25798;25799 25798 4 VSLAGACGVGGYGSR GGGGGFGRVSLAGACG GVGGYGSRSLYNLGGS R V S S R S 2 1 0 0 1 0 0 5 0 0 1 0 0 0 0 2 0 0 1 2 0 15 0 1409.6721 P13647;CON__P13647;F8VV57 P13647 49 63 KRT5 Keratin, type II cytoskeletal 5 yes no 2 9.109E-09 99.344 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 1 55135000 5093000 6566000 11888000 16699000 1278400 13611000 + 8673 299 8791 38988;38989;38990;38991;38992;38993 25800;25801;25802;25803 25802 4 VSLAGACGVGGYGSRSLYNLGGSK GGGGGFGRVSLAGACG LYNLGGSKRISISTSG R V S S K R 2 1 1 0 1 0 0 7 0 0 3 1 0 0 0 4 0 0 2 2 0 24 1 2329.1485 P13647;CON__P13647;F8VV57 P13647 49 72 KRT5 Keratin, type II cytoskeletal 5 yes no 3 1.4541E-07 63.706 By matching By matching By matching By MS/MS By matching By matching 1 1 26006000 0 4469500 0 21537000 0 0 + 8674 299 8792 38994;38995 25804 25804 1 VSLEPHQGPGTPESK TTRQQRKRVSLEPHQG GPGTPESKKATSCFPR R V S S K K 0 0 0 0 0 1 2 2 1 0 1 1 0 0 3 2 1 0 0 1 0 15 0 1561.7736 Q14980-2;Q14980;F5H2L0;H0YFY6;Q9BTE9 Q14980-2 1976 1990 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.0040394 53.3 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 8153100 1295500 1566000 1790000 992540 1078300 1430800 8675 1121 8793 38996;38997;38998;38999;39000;39001 25805 25805 1 VSPASSVDSNIPSSQGYKK LNKVNPHKVSPASSVD PSSQGYKKEGREQGTG K V S K K E 1 0 1 1 0 1 0 1 0 1 0 2 0 0 2 6 0 0 1 2 0 19 1 1949.9694 Q9UHB7;Q9UHB7-2 Q9UHB7 486 504 AFF4 AF4/FMR2 family member 4 yes no 3 0.0044972 42.059 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 6030900 2642900 710340 0 1128400 0 1549300 8676 1592 8794 39002;39003;39004;39005 25806;25807;25808 25806 3 VSPSDTTPLVSR TPQDYEMRVSPSDTTP DTTPLVSRSVPPVKLE R V S S R S 0 1 0 1 0 0 0 0 0 0 1 0 0 0 2 3 2 0 0 2 0 12 0 1257.6565 H7BXG5;Q9HCK8-2;Q9HCK8 H7BXG5 1765 1776 CHD8 Chromodomain-helicase-DNA-binding protein 8 yes no 2 0.027741 48.532 By matching By matching By matching By matching By matching By MS/MS 1 1 827530 0 229960 0 0 0 597560 8677 653 8795 39006;39007 25809 25809 1 VSQVIMEK LKKIRRFKVSQVIMEK VSQVIMEKSTMLYNKF K V S E K S 0 0 0 0 0 1 1 0 0 1 0 1 1 0 0 1 0 0 0 2 0 8 0 932.5001 O75475 O75475 408 415 PSIP1 PC4 and SFRS1-interacting protein yes yes 2 9.5727E-05 113.18 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 31776000 2733900 3450600 11424000 2092800 3787100 8288200 8678 741 8796 39008;39009;39010;39011;39012;39013;39014 25810;25811;25812;25813;25814 25811 5 VSRDTLYEAVR ________________ DTLYEAVREVLHGNQR K V S V R E 1 2 0 1 0 0 1 0 0 0 1 0 0 0 0 1 1 0 1 2 0 11 1 1307.6834 P62906 P62906 5 15 RPL10A 60S ribosomal protein L10a yes yes 3 0.019796 56.205 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 4149700 496940 588570 0 0 1573800 1490300 8679 997 8797 39015;39016;39017;39018 25815;25816 25815 2 VSRGDQESPDACLPPTVPEAPAPPQKPLNSQSQK SRIRAAEKVSRGDQES PLNSQSQKHLAPPPLL K V S Q K H 3 1 1 2 1 4 2 1 0 0 2 2 0 0 8 4 1 0 0 2 0 34 2 3624.7842 Q14676;Q14676-2;E9PGY5;F8W1C2;F8VZP8;F8VU38;Q14676-3;F8VV34;E7EVA7;H0Y6Z8 Q14676 1026 1059 MDC1 Mediator of DNA damage checkpoint protein 1 yes no 4 3.2484E-12 48.392 By MS/MS By matching By matching By matching By matching By MS/MS 1 1 63405000 39843000 0 0 0 0 23562000 8680 1109 8798 39019;39020 25817;25818;25819 25819 3 VSRPLELCYAPTKDPK LVNEKFWKVSRPLELC YAPTKDPK________ K V S P K - 1 1 0 1 1 0 1 0 0 0 2 2 0 0 3 1 1 0 1 1 0 16 2 1872.9768 Q06587-2;Q06587 Q06587-2 362 377 RING1 E3 ubiquitin-protein ligase RING1 yes no 3;4 0.0022426 56.774 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 2 1 2 2 2 1 30818000 6706500 1559300 5424800 4041700 8934100 4152000 8681 1043 8799 39021;39022;39023;39024;39025;39026;39027;39028;39029;39030 25820;25821;25822;25823 25820 4 VSRQSVLCGSQNIVLNGK IETASGNKVSRQSVLC QNIVLNGKCCILSFTY K V S G K C 0 1 2 0 1 2 0 2 0 1 2 1 0 0 0 3 0 0 0 3 0 18 1 1958.0367 H3BUD2;H3BS05;H3BQA4;H3BN51;H3BR94;Q9BTE1 H3BUD2 22 39 DCTN5 Dynactin subunit 5 yes no 3 9.2337E-14 97.095 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 13994000 6317200 0 7677200 0 0 0 8682 632 8800 39031;39032 25824;25825 25825 2 VSSLSSSLSVEGK RRNKTTYKVSSLSSSL SSLSVEGKELGLRVSA K V S G K E 0 0 0 0 0 0 1 1 0 0 2 1 0 0 0 6 0 0 0 2 0 13 0 1278.6667 Q5TGY3 Q5TGY3 495 507 AHDC1 AT-hook DNA-binding motif-containing protein 1 yes yes 2 0.0026185 64.798 By matching By MS/MS By matching By matching By matching By matching 1 1099400 0 1099400 0 0 0 0 8683 1199 8801 39033 25826 25826 1 VSSPAGPTEDNDLSRK QKLLSLTKVSSPAGPT EDNDLSRKAVAQAPGR K V S R K A 1 1 1 2 0 0 1 1 0 0 1 1 0 0 2 3 1 0 0 1 0 16 1 1671.8064 Q86YC2 Q86YC2 487 502 PALB2 Partner and localizer of BRCA2 yes yes 3 0.001662 53.946 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 2 1 1 1 1 1 6556000 1009100 967790 933150 695720 1080800 1869500 8684 1274 8802 39034;39035;39036;39037;39038;39039;39040 25827;25828;25829;25830 25830 4 VSSQFDPNKQTPSGK FAGNSKSKVSSQFDPN NKQTPSGKKCIAAKKI K V S G K K 0 0 1 1 0 2 0 1 0 0 0 2 0 1 2 3 1 0 0 1 0 15 1 1618.7951 Q01780;Q01780-2 Q01780 836 850 EXOSC10 Exosome component 10 yes no 2;3 0.00069161 74.789 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 3 2 2 2 2 2 48674000 7332500 6787700 10104000 4653000 7158900 12637000 8685 1030 8803 39041;39042;39043;39044;39045;39046;39047;39048;39049;39050;39051;39052;39053 25831;25832;25833;25834;25835;25836;25837;25838 25831 8 VSSQFDPNKQTPSGKK FAGNSKSKVSSQFDPN KQTPSGKKCIAAKKIK K V S K K C 0 0 1 1 0 2 0 1 0 0 0 3 0 1 2 3 1 0 0 1 0 16 2 1746.8901 Q01780;Q01780-2 Q01780 836 851 EXOSC10 Exosome component 10 yes no 3;4 0.0022916 62.357 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 3 2 2 2 2 3 36656000 4276200 5299900 6618700 3295100 4041800 13124000 8686 1030 8804 39054;39055;39056;39057;39058;39059;39060;39061;39062;39063;39064;39065;39066;39067 25839;25840;25841;25842;25843;25844;25845;25846;25847;25848 25843 9 VSSQIDTQDSSVK SETYLPLKVSSQIDTQ DTQDSSVKFCKNEPQD K V S V K F 0 0 0 2 0 2 0 0 0 1 0 1 0 0 0 4 1 0 0 2 0 13 0 1392.6733 Q16600 Q16600 68 80 ZNF239 Zinc finger protein 239 yes yes 2 0.0022322 68.171 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 2214300 0 257350 248720 0 524630 1183600 8687 1154 8805 39068;39069;39070;39071 25849;25850 25849 2 VSSSCLDLPDSTEEK EHYRIETRVSSSCLDL LPDSTEEKGAPIETLG R V S E K G 0 0 0 2 1 0 2 0 0 0 2 1 0 0 1 4 1 0 0 1 0 15 0 1665.7403 Q5VT52-3;Q5VT52;Q5VT52-2 Q5VT52-3 1041 1055 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 yes no 2 0.0060092 51.727 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 3214500 0 0 955660 0 1024500 1234300 8688 1202 8806 39072;39073;39074 25851;25852 25851 2 VSSVDKQREQTEILESSR EEQELKEKVSSVDKQR TEILESSRMRAQDIIG K V S S R M 0 2 0 1 0 2 3 0 0 1 1 1 0 0 0 4 1 0 0 2 0 18 2 2090.0604 Q5T200-2;Q5T200 Q5T200-2 914 931 ZC3H13 Zinc finger CCCH domain-containing protein 13 yes no 4 0.01412 39.91 By matching By MS/MS By matching By matching By matching By matching 1 1 3516800 0 1224200 0 0 0 2292600 8689 1188 8807 39075;39076 25853 25853 1 VSSVPSNSNVVVGTTNACAPSAR TAPVVSTRVSSVPSNS NACAPSARVGVCGGSC R V S A R V 3 1 3 0 1 0 0 1 0 0 0 0 0 0 2 5 2 0 0 5 0 23 0 2273.107 O43790;CON__O43790 O43790 453 475 KRT86 Keratin, type II cuticular Hb6 yes no 3 0.00485 41.911 By matching By matching By matching By MS/MS By matching By matching 1 1 1926100 0 989750 0 936360 0 0 + 8690 282 8808 39077;39078 25854 25854 1 VSTSNEDFSLKDDALAK SSTDALEKVSTSNEDF LKDDALAKTSKRKTKV K V S A K T 2 0 1 3 0 0 1 0 0 0 2 2 0 1 0 3 1 0 0 1 0 17 1 1838.8898 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 758 774 SETX Probable helicase senataxin yes no 3 0.0012468 73.833 By MS/MS By MS/MS By matching By matching By matching By matching 1 1 1 1 11037000 7080100 1244300 0 860710 0 1851600 8691 1250 8809 39079;39080;39081;39082 25855;25856 25856 2 VSTTAPVTLASSK VAQKQECKVSTTAPVT PVTLASSKTGSVVQPS K V S S K T 2 0 0 0 0 0 0 0 0 0 1 1 0 0 1 3 3 0 0 2 0 13 0 1260.6925 Q15652-2;Q15652-3;Q15652;H7BXU7 Q15652-2 1231 1243 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C yes no 2 0.021556 47.606 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5544500 0 1287600 1193200 1031100 0 2032600 8692 1144 8810 39083;39084;39085;39086 25857 25857 1 VSVAVEASADSSK AVKLAESKVSVAVEAS EASADSSKTDKKLQIQ K V S S K T 3 0 0 1 0 0 1 0 0 0 0 1 0 0 0 4 0 0 0 3 0 13 0 1248.6198 Q99590-2;F8VXG7;Q99590 Q99590-2 1045 1057 SCAF11 Protein SCAF11 yes no 2 0.010568 78.814 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 2080100 854140 729090 0 0 496840 0 8693 547 8811 39087;39088;39089;39090 25858;25859 25858 2 VSVAVEASADSSKTDK AVKLAESKVSVAVEAS ADSSKTDKKLQIQEKA K V S D K K 3 0 0 2 0 0 1 0 0 0 0 2 0 0 0 4 1 0 0 3 0 16 1 1592.7893 Q99590-2;F8VXG7;Q99590 Q99590-2 1045 1060 SCAF11 Protein SCAF11 yes no 2;3 1.6247E-79 132.08 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 3 2 2 29159000 5569600 3098000 4427500 5764100 6019400 4280800 8694 547 8812 39091;39092;39093;39094;39095;39096;39097;39098;39099;39100;39101;39102 25860;25861;25862;25863;25864;25865;25866;25867;25868 25867 9 VSVIQDFVK NSTAQTEKVSVIQDFV SVIQDFVKMCLEANIP K V S V K M 0 0 0 1 0 1 0 0 0 1 0 1 0 1 0 1 0 0 0 3 0 9 0 1033.5808 Q9UFW8 Q9UFW8 101 109 CGGBP1 CGG triplet repeat-binding protein 1 yes yes 2 0.0095388 85.807 By matching By matching By matching By matching By MS/MS By matching 1 25085000 0 0 0 0 25085000 0 8695 1588 8813 39103 25869 25869 1 VSVQRTQAPAVATT HLVKTHTRVSVQRTQA QAPAVATT________ R V S T T - 3 1 0 0 0 2 0 0 0 0 0 0 0 0 1 1 3 0 0 3 0 14 1 1427.7732 P15880;H0YEN5;E9PQD7 P15880 280 293 RPS2 40S ribosomal protein S2 yes no 2 0.0009768 88.075 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 29732000 5110200 2866800 3171000 4919500 9542700 4121900 8696 839 8814 39104;39105;39106;39107;39108;39109 25870;25871;25872;25873;25874 25872 5 VSYRASQPDLVDTPTSSKPQPK MTNEKTTKVSYRASQP TSSKPQPKRSLRKADT K V S P K R 1 1 0 2 0 2 0 0 0 0 1 2 0 0 4 4 2 0 1 2 0 22 2 2400.2285 P46013;F5H4V4;P46013-2 P46013 1735 1756 MKI67 Antigen KI-67 no no 3;4 2.9709E-133 137.39 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 750470000 138470000 72560000 177930000 98840000 94868000 167810000 8697 919;920 8815 39110;39111;39112;39113;39114;39115;39116;39117;39118;39119;39120;39121 25875;25876;25877;25878;25879;25880;25881;25882;25883;25884;25885;25886;25887;25888;25889 25876 15 VTADVINAAEK LIVRSATKVTADVINA DVINAAEKLQVVGRAG K V T E K L 3 0 1 1 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 2 0 11 0 1129.5979 O43175;Q5SZU1 O43175 59 69 PHGDH D-3-phosphoglycerate dehydrogenase yes no 2 0.0033399 83.137 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 21628000 2163800 3028900 2720800 2478900 3255200 7980400 8698 711 8816 39122;39123;39124;39125;39126;39127 25890;25891;25892;25893;25894 25893 5 VTAQQQLEVLLSR WMTVEGYRVTAQQQLE QLEVLLSRQRDGKHQT R V T S R Q 1 1 0 0 0 3 1 0 0 0 3 0 0 0 0 1 1 0 0 2 0 13 0 1483.8358 B8ZZT9;Q9Y5W8-2;Q9Y5W8 B8ZZT9 411 423 SNX13 Sorting nexin-13 yes no 3 0.006304 58.098 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 4518200 355110 617260 692750 357000 844660 1651400 8699 214 8817 39128;39129;39130;39131;39132;39133 25895 25895 1 VTARPSQPPLPR TQDKTPSKVTARPSQP PSQPPLPRRSTRLKT_ K V T P R R 1 2 0 0 0 1 0 0 0 0 1 0 0 0 4 1 1 0 0 1 0 12 1 1317.7517 B7ZAS8;Q9ULV3-3;H0Y5D5;Q9BTG3;Q9ULV3-4;Q9ULV3-2;Q5SYW2;Q9ULV3;F5H2X7 B7ZAS8 779 790 CIZ1 Cip1-interacting zinc finger protein yes no 3 0.01236 57.225 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 6037200 248090 1335800 0 807540 1124000 2521800 8700 203 8818 39134;39135;39136;39137;39138 25896 25896 1 VTASPLQR PQASLSTKVTASPLQR VTASPLQRLGNKTEIA K V T Q R L 1 1 0 0 0 1 0 0 0 0 1 0 0 0 1 1 1 0 0 1 0 8 0 870.49232 Q4VXZ8;Q9NUI1;Q9NUI1-3 Q4VXZ8 219 226 DECR2 Peroxisomal 2,4-dienoyl-CoA reductase yes no 2 0.0079237 98.458 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 19117000 1784700 4886700 6358600 1059200 5027900 0 8701 1172 8819 39139;39140;39141;39142;39143 25897;25898;25899;25900 25900 4 VTATDLDEPDTLHTR RSGTSVGKVTATDLDE EPDTLHTRLKYKILQQ K V T T R L 1 1 0 3 0 0 1 0 1 0 2 0 0 0 1 0 4 0 0 1 0 15 0 1682.8111 Q08554-2;Q08554 Q08554-2 264 278 DSC1 Desmocollin-1 yes no 2;3 0.00075511 75.911 By matching By MS/MS By MS/MS By MS/MS By MS/MS By matching 1 2 2 1 1 23045000 0 963180 5916200 5380500 3441200 7344200 8702 1047 8820 39144;39145;39146;39147;39148;39149;39150 25901;25902;25903;25904 25904 4 VTATDLDEPDTLHTRLK RSGTSVGKVTATDLDE DTLHTRLKYKILQQIP K V T L K Y 1 1 0 3 0 0 1 0 1 0 3 1 0 0 1 0 4 0 0 1 0 17 1 1923.9902 Q08554-2;Q08554 Q08554-2 264 280 DSC1 Desmocollin-1 yes no 4 0.035912 36.775 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 7559300 0 3398400 1982900 0 964280 1213700 8703 1047 8821 39151;39152;39153;39154 25905 25905 1 VTDDMYAEQTENPENPLRCPIK GIHQTGQKVTDDMYAE NPLRCPIKLYDFYLFK K V T I K L 1 1 2 2 1 1 3 0 0 1 1 1 1 0 3 0 2 0 1 1 0 22 1 2619.1945 Q2TAL8 Q2TAL8 683 704 QRICH1 Glutamine-rich protein 1 yes yes 3 0.00032389 67.252 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 8704 1162 8822 39155 25906 25906 1 VTDKVLTANSNPSSPSAAK ADKRKRSRVTDKVLTA PSSPSAAKRRRT____ R V T A K R 3 0 2 1 0 0 0 0 0 0 1 2 0 0 2 4 2 0 0 2 0 19 1 1885.9745 Q9NV56 Q9NV56 182 200 MRGBP MRG/MORF4L-binding protein yes yes 3 0.0012526 58.29 By MS/MS By matching By MS/MS By matching By matching By matching 1 1 1 1 3230600 1515800 381380 1147300 186140 0 0 8705 1547 8823 39156;39157;39158;39159 25907;25908 25907 2 VTEEIAIPLRR ALHISRSKVTEEIAIP EIAIPLRRSSRHQTLP K V T R R S 1 2 0 0 0 0 2 0 0 2 1 0 0 0 1 0 1 0 0 1 0 11 1 1295.7561 Q96QE3;Q96QE3-2 Q96QE3 720 730 ATAD5 ATPase family AAA domain-containing protein 5 yes no 3 0.0059216 63.184 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 18708000 4383300 0 8251700 0 869260 5203800 8706 1415 8824 39160;39161;39162;39163 25909;25910;25911 25909 3 VTEETVYTCTGHPLK STNMAFGKVTEETVYT TCTGHPLKSDIANILD K V T L K S 0 0 0 0 1 0 2 1 1 0 1 1 0 0 1 0 4 0 1 2 0 15 0 1733.8294 P40937;F8W9B4;P40937-2 P40937 230 244 RFC5 Replication factor C subunit 5 yes no 2 0.0024834 60.657 By matching By matching By matching By matching By matching By MS/MS 1 660890 0 0 0 0 0 660890 8707 909 8825 39164 25912 25912 1 VTEGLTDVILYHQPDDKK QILEEFSKVTEGLTDV YHQPDDKKKNRGFCFL K V T K K K 0 0 0 3 0 1 1 1 1 1 2 2 0 0 1 0 2 0 1 2 0 18 1 2070.0633 O60506-2;O60506;O60506-4;O60506-3;O60506-5 O60506-2 266 283 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 3 0.010901 51.76 By matching By matching By matching By matching By matching By MS/MS 1 7671800 0 0 0 0 0 7671800 8708 731 8826 39165 25913 25913 0 VTEGLTDVILYHQPDDKKK QILEEFSKVTEGLTDV HQPDDKKKNRGFCFLE K V T K K N 0 0 0 3 0 1 1 1 1 1 2 3 0 0 1 0 2 0 1 2 0 19 2 2198.1583 O60506-2;O60506;O60506-4;O60506-3;O60506-5 O60506-2 266 284 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q yes no 4 0.0012413 55.322 By matching By matching By matching By matching By matching By MS/MS 1 7645900 0 0 0 0 0 7645900 8709 731 8827 39166 25914 25914 1 VTEKIPVRHLYTK GKVCFEMKVTEKIPVR PVRHLYTKDIDIHEVR K V T T K D 0 1 0 0 0 0 1 0 1 1 1 2 0 0 1 0 2 0 1 2 0 13 2 1582.9195 Q00839;B3KX72;Q5RI18;Q00839-2 Q00839 340 352 HNRNPU Heterogeneous nuclear ribonucleoprotein U no no 3 0.0072279 65.241 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 7589800 0 1544300 1159100 793690 3680100 412660 8710 1022;1023 8828 39167;39168;39169;39170;39171 25915 25915 1 VTELALTASDRQTK FLDVFLPRVTELALTA TASDRQTKVAACELLH R V T T K V 2 1 0 1 0 1 1 0 0 0 2 1 0 0 0 1 3 0 0 1 0 14 1 1531.8206 P78527;E7EUY0;P78527-2 P78527 914 927 PRKDC DNA-dependent protein kinase catalytic subunit yes no 3 1.3348E-07 96.059 By matching By matching By matching By matching By matching By MS/MS 1 1 1 4181100 313010 0 0 0 1129500 2738600 8711 1012 8829 39172;39173;39174 25916 25916 1 VTENLRVLGEAQTK LMGQVLAKVTENLRVL VLGEAQTKAQHQQALS K V T T K A 1 1 1 0 0 1 2 1 0 0 2 1 0 0 0 0 2 0 0 2 0 14 1 1556.8522 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 983 996 MYBBP1A Myb-binding protein 1A yes no 2;3 0.0045951 57.53 By matching By matching By matching By matching By matching By MS/MS 2 2 2 1 2 2 87785000 8743200 10712000 9484100 1580300 14901000 42365000 8712 682 8830 39175;39176;39177;39178;39179;39180;39181;39182;39183;39184;39185 25917;25918 25918 2 VTENQIPAK QSLPVTEKVTENQIPA TENQIPAKNSSTEPKG K V T A K N 1 0 1 0 0 1 1 0 0 1 0 1 0 0 1 0 1 0 0 1 0 9 0 998.53966 Q9NQW6;Q9NQW6-2 Q9NQW6 492 500 ANLN Actin-binding protein anillin yes no 2 1.6235E-19 128.38 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 36614000 3206600 8243000 11938000 1882200 3409900 7934600 8713 1533 8831 39186;39187;39188;39189;39190;39191 25919;25920;25921;25922;25923 25920 5 VTEQALLRPQSK SPREPASKVTEQALLR ALLRPQSKNGPQEKDC K V T S K N 1 1 0 0 0 2 1 0 0 0 2 1 0 0 1 1 1 0 0 1 0 12 1 1368.7725 Q9HB21 Q9HB21 370 381 PLEKHA1 Pleckstrin homology domain-containing family A member 1 yes yes 3 0.036025 45.891 By matching By matching By matching By matching By matching By MS/MS 1 1 1535700 0 0 0 0 462590 1073100 8714 1516 8832 39192;39193 25924 25924 1 VTETSSHDIYEEAEADNEESDK KTDVNASKVTETSSHD ADNEESDKDSLNEMFP K V T D K D 2 0 1 3 0 0 6 0 1 1 0 1 0 0 0 3 2 0 1 1 0 22 0 2497.0252 Q8IWC1-2;Q8IWC1;H7BY77;Q8IWC1-3 Q8IWC1-2 691 712 MAP7D3 MAP7 domain-containing protein 3 yes no 3 2.1912E-06 64.422 By matching By matching By MS/MS By matching By matching By matching 1 1 2191100 0 0 1400000 791100 0 0 8715 1280 8833 39194;39195 25925;25926 25925 2 VTFCSHGNSAFQPIASSCK TKMTTSQKVTFCSHGN QPIASSCKIVPQSQVP K V T C K I 2 0 1 0 2 1 0 1 1 1 0 1 0 2 1 4 1 0 0 1 0 19 0 2096.9408 Q9ULM3 Q9ULM3 417 435 YEATS2 YEATS domain-containing protein 2 yes yes 3 1.4949E-11 94.845 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 11163000 0 0 7093300 927920 781420 2360600 8716 1609 8834 39196;39197;39198;39199 25927;25928 25927 2 VTFGLNR KTPSSSKKVTFGLNRN KVTFGLNRNMTAEFKK K V T N R N 0 1 1 0 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 7 0 805.44464 Q14684-2;Q14684 Q14684-2 666 672 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 2 5.9358E-21 132.72 By matching By matching By matching By matching By matching By MS/MS 1 1 1 17881000 0 0 3236400 2356500 0 12288000 8717 1111 8835 39200;39201;39202 25929 25929 1 VTFGLNRNMTAEFK KTPSSSKKVTFGLNRN RNMTAEFKKTDKSILV K V T F K K 1 1 2 0 0 0 1 1 0 0 1 1 1 2 0 0 2 0 0 1 0 14 1 1626.8188 Q14684-2;Q14684 Q14684-2 666 679 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 3 0.0055299 55.98 By matching By matching By matching By MS/MS By matching By matching 1 23939000 0 0 0 23939000 0 0 8718 1111 8836 39203 25930 25930 1 VTFGLNRNMTAEFKK KTPSSSKKVTFGLNRN NMTAEFKKTDKSILVS K V T K K T 1 1 2 0 0 0 1 1 0 0 1 2 1 2 0 0 2 0 0 1 0 15 2 1754.9138 Q14684-2;Q14684 Q14684-2 666 680 RRP1B Ribosomal RNA processing protein 1 homolog B yes no 3;4 0.0024586 64.842 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 1 64421000 27066000 2655100 9275000 21477000 3947300 0 8719 1111 8837 39204;39205;39206;39207;39208 25931;25932;25933;25934;25935;25936 25935 6 VTFNLSK SRENDEEKVTFNLSKG KVTFNLSKGACSSSGA K V T S K G 0 0 1 0 0 0 0 0 0 0 1 1 0 1 0 1 1 0 0 1 0 7 0 807.44905 B4DX32;O60870;F5GXB3 B4DX32 203 209 KIN DNA/RNA-binding protein KIN17 yes no 2 0.035254 84.568 By MS/MS By matching By matching By matching By matching By matching 1 1 1 1 28618000 3260500 5816200 5702500 0 0 13838000 8720 136 8838 39209;39210;39211;39212 25937 25937 1 VTGDSQPKEQGQGDLKK YIRKKGGKVTGDSQPK QGQGDLKKKKKKKKGK K V T K K K 0 0 0 2 0 3 1 3 0 0 1 3 0 0 1 1 1 0 0 1 0 17 2 1813.917 G5E9Z8;H0YH39;O76094 G5E9Z8 476 492 SRP72 Signal recognition particle subunit SRP72 yes no 4 0.02611 37.913 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 4632300 1155100 0 854020 638280 1094100 890860 8721 600 8839 39213;39214;39215;39216;39217 25938 25938 1 VTGPGAEAVQIVAK VNLQTSSKVTGPGAEA EAVQIVAKNTVTLQVQ K V T A K N 3 0 0 0 0 1 1 2 0 1 0 1 0 0 1 0 1 0 0 3 0 14 0 1338.7507 Q96BD5-2;Q96BD5;Q96BD5-3 Q96BD5-2 186 199 PHF21A PHD finger protein 21A yes no 2 0.027141 44.436 By matching By matching By matching By matching By matching By MS/MS 1 1 3130100 0 424900 0 0 0 2705200 8722 1371 8840 39218;39219 25939 25939 0 VTGRCGSVLVR KPHTVPCKVTGRCGSV RCGSVLVRLIPAPRGT K V T V R L 0 2 0 0 1 0 0 2 0 0 1 0 0 0 0 1 1 0 0 3 0 11 1 1202.6554 P15880;H0YEN5;E9PQD7;E9PMM9;I3L404;E9PM36 P15880 184 194 RPS2 40S ribosomal protein S2 yes no 3 0.02746 52.391 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 5720400 0 727720 682950 2395100 1914500 0 8723 839 8841 39220;39221;39222;39223 25940 25940 1 VTHAVVTVPAYFNDAQRQATK AEAYLGKKVTHAVVTV DAQRQATKDAGTIAGL K V T T K D 4 1 1 1 0 2 0 0 1 0 0 1 0 1 1 0 3 0 1 4 0 21 1 2315.2022 P11021;B4DEF7 P11021 165 185 HSPA5 78 kDa glucose-regulated protein yes no 4 0.018722 36.997 By matching By MS/MS By matching By matching By matching By matching 1 4934000 0 4934000 0 0 0 0 8724 823 8842 39224 25941 25941 1 VTHVEPWEK VVDEIYFKVTHVEPWE THVEPWEKGSRKTAGQ K V T E K G 0 0 0 0 0 0 2 0 1 0 0 1 0 0 1 0 1 1 0 2 0 9 0 1123.5662 Q5VTL8;Q5VTL8-2 Q5VTL8 93 101 PRPF38B Pre-mRNA-splicing factor 38B yes no 2 0.00015575 112.36 By MS/MS By matching By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 15565000 1434400 2967000 1325800 1059500 4808300 3970000 8725 1203 8843 39225;39226;39227;39228;39229;39230 25942;25943;25944;25945;25946 25942 5 VTIAQGGVLPNIQAVLLPK ELNKLLGKVTIAQGGV IQAVLLPKKTESHHKT K V T P K K 2 0 1 0 0 2 0 2 0 2 3 1 0 0 2 0 1 0 0 3 0 19 0 1930.1615 Q99878;Q96KK5;Q9BTM1;Q16777;Q93077;Q7L7L0;Q6FI13;P20671;P0C0S8;P04908;H0YFX9;Q96QV6;P16104;Q8IUE6 Q99878 101 119 HIST1H2AJ;HIST1H2AH;H2AFJ;HIST2H2AC;HIST1H2AC;HIST3H2A;HIST2H2AA3;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST1H2AA;H2AFX;HIST2H2AB Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 2-C;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 2-A;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A;Histone H2A type 1-A;Histone H2A.x;Histone H2A type 2-B yes no 2 6.8698E-82 129.05 By MS/MS By matching By matching By matching By matching By matching 1 91622000 91622000 0 0 0 0 0 8726 792 8844 39231 25947 25947 1 VTILKGIPIKK KVRKPKGKVTILKGIP LKGIPIKKTKKGCRKS K V T K K T 0 0 0 0 0 0 0 1 0 3 1 3 0 0 1 0 1 0 0 1 0 11 2 1208.822 O95243-2 O95243-2 235 245 MBD4 Methyl-CpG-binding domain protein 4 no no 3 0.026728 66.92 By matching By matching By matching By matching By MS/MS By matching 1 1 1 3255900 0 0 821800 1111900 1322200 0 8727 769 8845 39232;39233;39234 25948 25948 1 VTINDLNENSVTLIQENCHLNK KHLGNAVKVTINDLNE QENCHLNKLKVVVDSK K V T N K L 0 0 5 1 1 1 2 0 1 2 3 1 0 0 0 1 2 0 0 2 0 22 0 2567.265 Q7Z2T5;Q7Z2T5-2 Q7Z2T5 303 324 TRMT1L TRMT1-like protein yes no 3 0 204.51 By matching By MS/MS By matching By matching By matching By matching 1 44221000 0 44221000 0 0 0 0 8728 1248 8846 39235 25949 25949 1 VTINDLNENSVTLIQENCHLNKLK KHLGNAVKVTINDLNE NCHLNKLKVVVDSKEK K V T L K V 0 0 5 1 1 1 2 0 1 2 4 2 0 0 0 1 2 0 0 2 0 24 1 2808.444 Q7Z2T5;Q7Z2T5-2 Q7Z2T5 303 326 TRMT1L TRMT1-like protein yes no 4 1.7949E-264 162.39 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 88042000 0 35803000 0 0 0 52239000 8729 1248 8847 39236;39237 25950;25951 25950 2 VTKNEEPSEEEIDAPKPK VVSSKTKKVTKNEEPS EIDAPKPKKMKKEKEM K V T P K K 1 0 1 1 0 0 5 0 0 1 0 3 0 0 3 1 1 0 0 1 0 18 2 2039.0059 Q9NR30;Q9NR30-2 Q9NR30 114 131 DDX21 Nucleolar RNA helicase 2 yes no 3;4 1.4841E-73 129.11 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 1 2 94887000 20570000 10746000 11416000 9531400 31640000 10984000 8730 1534 8848 39238;39239;39240;39241;39242;39243;39244;39245;39246;39247;39248 25952;25953;25954;25955;25956;25957;25958;25959;25960;25961;25962;25963 25961 12 VTLATLK NYEGSPIKVTLATLKM KVTLATLKMSVQPTVS K V T L K M 1 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 2 0 0 1 0 7 0 744.47454 P06748-2;P06748;P06748-3;E5RI98 P06748-2 74 80 NPM1 Nucleophosmin yes no 1 0.012318 71.342 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 13894000 2271000 0 1453700 978330 597420 8593400 8731 801 8849 39249;39250;39251;39252;39253 25964;25965 25964 1 VTLEARNSSEKLPTELSK SISDGPSKVTLEARNS KLPTELSKEEPSTKNT K V T S K E 1 1 1 0 0 0 3 0 0 0 3 2 0 0 1 3 2 0 0 1 0 18 2 2001.0742 P38432 P38432 264 281 COIL Coilin yes yes 3 0.004461 66.977 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 21928000 0 5903300 6107600 6305100 435010 3177000 8732 904 8850 39254;39255;39256;39257;39258 25966;25967 25966 2 VTLEYRPVIDK YVDVGTGKVTLEYRPV EYRPVIDKTLNEADCA K V T D K T 0 1 0 1 0 0 1 0 0 1 1 1 0 0 1 0 1 0 1 2 0 11 1 1331.7449 E9PBJ5;P31040;E9PEF8;D6RFM5 E9PBJ5 589 599 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 2 0.012145 96.604 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 11043000 3781000 2041600 0 1254400 0 3966300 8733 407 8851 39259;39260;39261;39262 25968 25968 0 VTLGDTLTRR PAEHEVKKVTLGDTLT LGDTLTRRSISQQKSG K V T R R S 0 2 0 1 0 0 0 1 0 0 2 0 0 0 0 0 3 0 0 1 0 10 1 1130.6408 E7EQT4;Q9UKV3;Q9UKV3-5;Q9UKV3-3;Q9UKV3-2;G3V3B0 E7EQT4 931 940 ACIN1 Apoptotic chromatin condensation inducer in the nucleus yes no 2 0.014763 93.667 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 13124000 1574800 2569100 1051900 1804100 2590800 3533800 8734 364 8852 39263;39264;39265;39266;39267;39268 25969 25969 1 VTLGTQQRQEMDPR ECVVDAGKVTLGTQQR QRQEMDPRLREKQNEI K V T P R L 0 2 0 1 0 3 1 1 0 0 1 0 1 0 1 0 2 0 0 1 0 14 1 1657.8206 Q08AF3;Q08AF3-2;B4E128 Q08AF3 21 34 SLFN5 Schlafen family member 5 yes no 3 0.010952 50.46 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 8032600 947510 1791800 0 1273700 4019500 0 8735 1049 8853 39269;39270;39271;39272 25970;25971 25971 2 VTLSEGPHHVALFK MMTRSPVKVTLSEGPH PHHVALFKDSSREFDL K V T F K D 1 0 0 0 0 0 1 1 2 0 2 1 0 1 1 1 1 0 0 2 0 14 0 1533.8304 O60313;E5KLK1;E5KLJ6;E5KLJ9;O60313-2;E5KLJ5 O60313 329 342 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 2;3 0.0018192 67.019 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 3859500 802540 1614400 0 0 0 1442500 8736 336 8854 39273;39274;39275 25972;25973;25974 25972 3 VTMQNLNDR GLLSGNEKVTMQNLND TMQNLNDRLASYLDKV K V T D R L 0 1 2 1 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 9 0 1089.5237 P13645;CON__P13645;CON__P02535-1;CON__A2A4G1;Q7Z3Y7;CON__Q148H6;CON__Q7Z3Y7;Q7Z3Z0;CON__Q7Z3Z0;Q7Z3Y8;CON__Q7Z3Y8;CON__Q9Z2K1;CON__Q3ZAW8;E7ENV4;Q7Z3Y9;CON__Q7Z3Y9;P02533;CON__P02533;P08779;CON__P08779 P13645 148 156 KRT10;KRT28;KRT25;KRT27;KRT26;KRT14;KRT16 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 28;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 27;Keratin, type I cytoskeletal 26;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 16 no no 2 0.039153 60.398 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 8025200 0 1932400 941320 1027800 1444500 2679300 + 8737 298;286;297 8855 39276;39277;39278;39279;39280 25975 25975 1 VTNLLMLKGK SLGLPFGKVTNLLMLK NLLMLKGKNQAFIEMN K V T G K N 0 0 1 0 0 0 0 1 0 0 3 2 1 0 0 0 1 0 0 1 0 10 1 1115.6737 P26599;P26599-2;P26599-3;O95758-1;O95758-6;O95758-2;O95758;O95758-5;O95758-4 P26599 85 94 PTBP1;PTBP3 Polypyrimidine tract-binding protein 1;Polypyrimidine tract-binding protein 3 no no 2 2.5764E-47 138.99 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 1 43916000 0 10291000 9896200 2824500 2526200 18378000 8738 882;774 8856 39281;39282;39283;39284;39285;39286 25976;25977;25978;25979 25978 4 VTPQIDSSRIR GFSPSAAKVTPQIDSS QIDSSRIRSHICSHPG K V T I R S 0 2 0 1 0 1 0 0 0 2 0 0 0 0 1 2 1 0 0 1 0 11 1 1270.6993 Q13118-2;Q13118 Q13118-2 346 356 KLF10 Krueppel-like factor 10 yes no 3 0.0049621 74.841 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1 1 1 8737500 1507200 1093300 1002300 1680900 2031300 1422400 8739 1070 8857 39287;39288;39289;39290;39291;39292 25980 25980 1 VTQAIQSFCLEK IFNPDNPKVTQAIQSF IQSFCLEKIEEMLENA K V T E K I 1 0 0 0 1 2 1 0 0 1 1 1 0 1 0 1 1 0 0 1 0 12 0 1422.7177 P49959-2;F8W7U8;P49959;B3KTC7 P49959-2 328 339 MRE11A Double-strand break repair protein MRE11A yes no 2 3.5413E-18 115.37 By matching By matching By matching By matching By matching By MS/MS 1 13034000 0 0 0 0 0 13034000 8740 558 8858 39293 25981 25981 1 VTQLLPQNVHSHNSISKPQK ESEPLREKVTQLLPQN NSISKPQKGGPLNKEY K V T Q K G 0 0 2 0 0 3 0 0 2 1 2 2 0 0 2 3 1 0 0 2 0 20 1 2254.2182 Q9UNY4;Q9UNY4-2 Q9UNY4 258 277 TTF2 Transcription termination factor 2 yes no 4 0.0077373 43.115 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 8300400 0 0 1535000 903270 1631000 4231100 8741 1618 8859 39294;39295;39296;39297 25982 25982 1 VTRADVDVQPYAFTTK GKSSFINKVTRADVDV QPYAFTTKSLFVGHMD K V T T K S 2 1 0 2 0 1 0 0 0 0 0 1 0 1 1 0 3 0 1 3 0 16 1 1809.9261 Q9BZE4;B7Z7A3;B4DY13 Q9BZE4 188 203 GTPBP4 Nucleolar GTP-binding protein 1 yes no 3 0.00030036 83.751 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 32638000 0 2089600 10940000 1771800 5250700 12585000 8742 1471 8860 39298;39299;39300;39301;39302 25983;25984 25984 2 VTSAVVGPSHEVQEQSSGPFK PGQNIPTKVTSAVVGP EQSSGPFKKQSATNLE K V T F K K 1 0 0 0 0 2 2 2 1 0 0 1 0 1 2 4 1 0 0 4 0 21 0 2169.0702 C9JJ88;Q2KHR3-2;Q2KHR3 C9JJ88 719 739 QSER1 Glutamine and serine-rich protein 1 yes no 3 0.0021946 48.51 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2916000 1158900 0 0 0 679900 1077200 8743 253 8861 39303;39304;39305 25985 25985 1 VTSGGVSESPSGFSK KKGAKRPRVTSGGVSE ESPSGFSKHIQSNLDF R V T S K H 0 0 0 0 0 0 1 3 0 0 0 1 0 1 1 5 1 0 0 2 0 15 0 1424.6783 O14757-2;F5H7S4;O14757;E7EPP6 O14757-2 184 198 CHEK1 Serine/threonine-protein kinase Chk1 yes no 2 0.00048602 80.102 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 16760000 1789800 2108300 2471200 1953200 3696600 4740400 8744 358 8862 39306;39307;39308;39309;39310;39311;39312 25986;25987;25988;25989;25990;25991 25988 6 VTSSITIYPSDSSSPR VSKPGPNKVTSSITIY PSDSSSPRAAPGEALR K V T P R A 0 1 0 1 0 0 0 0 0 2 0 0 0 0 2 6 2 0 1 1 0 16 0 1695.8315 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 792 807 LUZP1 Leucine zipper protein 1 yes no 2 0.017856 39.753 By matching By MS/MS By matching By matching By matching By matching 1 1 1687400 0 1361900 0 0 325440 0 8745 1265 8863 39313;39314 25992 25992 0 VTSVPGKASDPGAASTK PQSKSSSKVTSVPGKA DPGAASTKSGKASTLS K V T T K S 3 0 0 1 0 0 0 2 0 0 0 2 0 0 2 3 2 0 0 2 0 17 1 1571.8155 Q86VM9;E7ERS3;H3BRH3 Q86VM9 902 918 ZC3H18 Zinc finger CCCH domain-containing protein 18 yes no 3 0.0024018 53.395 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 30560000 3713900 3367600 3599000 2604500 9528500 7746300 8746 372 8864 39315;39316;39317;39318;39319;39320 25993;25994;25995 25994 3 VTTVVATPGQGPDRPQEVSYTDTK SRDKDGSKVTTVVATP EVSYTDTKVIGNGSFG K V T T K V 1 1 0 2 0 2 1 2 0 0 0 1 0 0 3 1 5 0 1 4 0 24 1 2545.266 P49841;P49841-2 P49841 37 60 GSK3B Glycogen synthase kinase-3 beta yes no 3 0.00024236 52.273 By matching By MS/MS By MS/MS By matching By MS/MS By matching 1 1 1 1 27756000 0 11081000 7130700 2777500 6766600 0 8747 946 8865 39321;39322;39323;39324 25996;25997;25998 25997 2 VTVAEVQR LSSTSKYKVTVAEVQR VTVAEVQRRLSPPECL K V T Q R R 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 3 0 8 0 900.50288 P05549-5;Q5TAV5;P05549;H7C4N4;C9JXZ2;H7C5E5;B4DWK3;C1K3N0;P05549-2;Q92754 P05549-5 223 230 TFAP2A;TFAP2C Transcription factor AP-2-alpha;Transcription factor AP-2 gamma yes no 2 0.0061452 107.29 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 5504200 1225600 156620 0 700800 1282000 2139200 8748 797 8866 39325;39326;39327;39328;39329 25999;26000 26000 2 VTVAGLAGKDPVQCSR VMRRAGIKVTVAGLAG KDPVQCSRDVVICPDA K V T S R D 2 1 0 1 1 1 0 2 0 0 1 1 0 0 1 1 1 0 0 3 0 16 1 1656.8617 Q99497 Q99497 33 48 PARK7 Protein DJ-1 yes yes 3 0.0028063 55.782 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 11540000 1686200 3228200 1112200 0 296110 5217800 8749 1425 8867 39330;39331;39332;39333;39334 26001;26002;26003 26001 3 VTVAGLAGKDPVQCSRDVVICPDASLEDAK VMRRAGIKVTVAGLAG DASLEDAKKEGPYDVV K V T A K K 4 1 0 4 2 1 1 2 0 1 2 2 0 0 2 2 1 0 0 5 0 30 2 3169.5747 Q99497 Q99497 33 62 PARK7 Protein DJ-1 yes yes 4 3.1922E-09 59.893 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 116590000 0 18197000 93497000 4896400 0 0 8750 1425 8868 39335;39336;39337 26004;26005 26005 1 VTVDTGVIPASEEK EEETVKSKVTVDTGVI VIPASEEKAETPTAAE K V T E K A 1 0 0 1 0 0 2 1 0 1 0 1 0 0 1 1 2 0 0 3 0 14 0 1443.7457 O60841 O60841 285 298 EIF5B Eukaryotic translation initiation factor 5B yes yes 2 0.0011067 80.746 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 2 1 18307000 5495800 2229200 1907100 2426200 3614200 2635000 8751 734 8869 39338;39339;39340;39341;39342;39343;39344 26006;26007;26008;26009;26010;26011 26010 6 VTYTEFCQGR LRIQGVPKVTYTEFCQ YTEFCQGRTMRWALAW K V T G R T 0 1 0 0 1 1 1 1 0 0 0 0 0 1 0 0 2 0 1 1 0 10 0 1259.5605 Q86W50;B7Z3X7 Q86W50 270 279 METTL16 Methyltransferase-like protein 16 yes no 2 0.0066106 85.355 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 5006900 383250 1245700 0 0 1234300 2143600 8752 1267 8870 39345;39346;39347;39348 26012 26012 1 VVAVSSVR GGGTSAWRVVAVSSVR VVAVSSVRLCARYQRG R V V V R L 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 4 0 8 0 815.4865 Q96H79 Q96H79 82 89 ZC3HAV1L Zinc finger CCCH-type antiviral protein 1-like yes yes 2 0.01555 84.568 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 2652500 0 1224500 0 0 0 1428000 8753 1390 8871 39349;39350 26013;26014 26013 2 VVDALNQGLPRVPYRDSK TSLFVLGKVVDALNQG RVPYRDSKLTRLLQDS K V V S K L 1 2 1 2 0 1 0 1 0 0 2 1 0 0 2 1 0 0 1 3 0 18 2 2026.096 Q14807;B7Z265;H3BRB3 Q14807 307 324 KIF22 Kinesin-like protein KIF22 yes no 4 0.0050993 46.156 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 1 38468000 0 6123600 0 3583600 0 28761000 8754 1115 8872 39351;39352;39353 26015;26016;26017 26017 3 VVECIDHKAGGRHVAVK LGEGAFGKVVECIDHK GGRHVAVKIVKNVDRY K V V V K I 2 1 0 1 1 0 1 2 2 1 0 2 0 0 0 0 0 0 0 4 0 17 2 1873.9945 E9PH13;P49759;P49759-3;F8WBF5 E9PH13 145 161 CLK1 Dual specificity protein kinase CLK1 yes no 4 0.0027182 51.643 By matching By matching By matching By MS/MS By matching By matching 1 1 1 5932600 0 0 1132800 1939700 2860200 0 8755 434 8873 39354;39355;39356 26018 26018 1 VVECLDHAR LGEGTFGKVVECLDHA VECLDHARGKSQVALK K V V A R G 1 1 0 1 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 2 0 9 0 1097.5288 P49761-1;P49761;H3BUL5;H3BVF8;H3BQG1 P49761-1 170 178 CLK3 Dual specificity protein kinase CLK3 yes no 2 9.4916E-42 140.83 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 11165000 0 1690100 2499700 691630 1724200 4558900 8756 944 8874 39357;39358;39359;39360;39361 26019;26020;26021;26022 26020 4 VVECLDHARGK LGEGTFGKVVECLDHA CLDHARGKSQVALKII K V V G K S 1 1 0 1 1 0 1 1 1 0 1 1 0 0 0 0 0 0 0 2 0 11 1 1282.6452 P49761-1;P49761;H3BUL5;H3BVF8;H3BQG1 P49761-1 170 180 CLK3 Dual specificity protein kinase CLK3 yes no 2;3 7.6515E-30 129.88 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 2 2 2 2 71050000 5790700 11787000 23072000 8230700 7004600 15165000 8757 944 8875 39362;39363;39364;39365;39366;39367;39368;39369;39370;39371;39372 26023;26024;26025;26026;26027;26028;26029;26030 26025 8 VVEELTRIH ATADDLIKVVEELTRI VEELTRIH________ K V V I H - 0 1 0 0 0 0 2 0 1 1 1 0 0 0 0 0 1 0 0 2 0 9 1 1094.6084 B4DZP5;Q16531;F8WF81;F5GZ34;B4DG00 B4DZP5 818 826 DDB1 DNA damage-binding protein 1 yes no 2 0.017712 90.15 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 8290000 693890 1853400 1698600 565660 633110 2845400 8758 148 8876 39373;39374;39375;39376;39377;39378 26031;26032 26032 2 VVELLLQHK ACNHGHLKVVELLLQH VELLLQHKALVNTTGY K V V H K A 0 0 0 0 0 1 1 0 1 0 3 1 0 0 0 0 0 0 0 2 0 9 0 1077.6546 E7EUI3;Q99728 E7EUI3 332 340 BARD1 BRCA1-associated RING domain protein 1 yes no 2 0.016491 73.233 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 13266000 0 1275300 2239500 0 115100 9636300 8759 386 8877 39379;39380;39381;39382 26033;26034 26033 2 VVETELQEGATK KTQGKQVKVVETELQE ELQEGATKQATTPKPD K V V T K Q 1 0 0 0 0 1 3 1 0 0 1 1 0 0 0 0 2 0 0 2 0 12 0 1302.6667 Q8NFC6 Q8NFC6 923 934 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 yes yes 2 3.0634E-05 100.38 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 10609000 0 2432800 1385400 748460 2237300 3805000 8760 1325 8878 39383;39384;39385;39386;39387 26035;26036;26037;26038;26039 26039 5 VVFSQQELRK CRDKKNCKVVFSQQEL FSQQELRKRLTPLQYH K V V R K R 0 1 0 0 0 2 1 0 0 0 1 1 0 1 0 1 0 0 0 2 0 10 1 1232.6877 F5H7C4;F5H6G9;F5H199;H0YFW5;Q8IXL7-2;Q8IXL7 F5H7C4 36 45 MSRB3 Methionine-R-sulfoxide reductase B3 yes no 3 0.0014733 106.88 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 9952400 1449300 1680200 1924800 671150 1471700 2755200 8761 509 8879 39388;39389;39390;39391;39392;39393;39394 26040;26041;26042;26043;26044;26045;26046 26044 7 VVGCSCVVVK DREGKPRKVVGCSCVV GCSCVVVKDYGKESQA K V V V K D 0 0 0 0 2 0 0 1 0 0 0 1 0 0 0 1 0 0 0 5 0 10 0 1105.5624 P25398 P25398 103 112 RPS12 40S ribosomal protein S12 yes yes 2 0.009973 74.533 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 1 26718000 3585900 2224100 1059400 3703200 10827000 5317900 8762 875 8880 39395;39396;39397;39398;39399;39400 26047 26047 1 VVGCSCVVVKDYGK DREGKPRKVVGCSCVV VVVKDYGKESQAKDVI K V V G K E 0 0 0 1 2 0 0 2 0 0 0 2 0 0 0 1 0 0 1 5 0 14 1 1568.7691 P25398 P25398 103 116 RPS12 40S ribosomal protein S12 yes yes 3 0.0047535 57.267 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 8249400 230760 0 768900 3121400 3056700 1071700 8763 875 8881 39401;39402;39403;39404;39405 26048;26049;26050;26051 26048 4 VVGEDVATSSSAK VGRVSKEKVVGEDVAT VATSSSAKKATGRKKS K V V A K K 2 0 0 1 0 0 1 1 0 0 0 1 0 0 0 3 1 0 0 3 0 13 0 1248.6198 Q03164-2;Q03164;E9PQG7;E9PR05 Q03164-2 916 928 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 yes no 2 0.0015944 80.371 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 12683000 1817900 1697400 1643300 2347300 2975800 2201000 8764 464 8882 39406;39407;39408;39409;39410;39411 26052;26053;26054;26055;26056;26057 26054 6 VVLAEVIQAFSAPENAVRMDEAR ALSAEQAKVVLAEVIQ AVRMDEARDNACNDMG K V V A R D 5 2 1 1 0 1 3 0 0 1 1 0 1 1 1 1 0 0 0 4 0 23 1 2514.2901 F5GXW5;Q99622 F5GXW5 18 40 C12orf57 Protein C10 yes no 3 0.0046766 49.592 By matching By matching By matching By matching By MS/MS By matching 1 0 0 0 0 0 0 0 8765 492 8883 39412 26058 26058 57 1 VVLVLAGR GKFMKPGKVVLVLAGR VVLVLAGRYSGRKAVI K V V G R Y 1 1 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 3 0 8 0 825.54362 P61353 P61353 10 17 RPL27 60S ribosomal protein L27 yes yes 2 0.0067249 94.662 By MS/MS By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 1 37581000 5040100 0 8910500 2186700 8589200 12855000 8766 982 8884 39413;39414;39415;39416;39417 26059;26060;26061 26061 3 VVNANQNASPNVPGK LKIATAAKVVNANQNA ASPNVPGKRGRPRKLK K V V G K R 2 0 4 0 0 1 0 1 0 0 0 1 0 0 2 1 0 0 0 3 0 15 0 1507.7743 F5H7K2;Q8IWI9;E7ENI0;H3BP52;H3BTF4 F5H7K2 599 613 MGA MAX gene-associated protein yes no 2 0.0049454 56.514 By MS/MS By matching By MS/MS By matching By MS/MS By matching 2 1 1 1 1 1 8130500 1630600 905250 1423600 1007500 1407600 1755900 8767 351 8885 39418;39419;39420;39421;39422;39423;39424 26062;26063;26064;26065 26064 3 VVNGAAASQPPSK KAKAGELKVVNGAAAS AASQPPSKRKRRWDQT K V V S K R 3 0 1 0 0 1 0 1 0 0 0 1 0 0 2 2 0 0 0 2 0 13 0 1224.6463 O75533 O75533 183 195 SF3B1 Splicing factor 3B subunit 1 yes yes 2 0.0022326 66.393 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 4491600 487810 1066700 820510 0 595620 1520900 8768 746 8886 39425;39426;39427;39428;39429 26066;26067;26068 26068 3 VVNITSPGHDASSRSPTTTASVSATAAPR RAEKGVARVVNITSPG VSATAAPRTVRVAMQV R V V P R T 5 2 1 1 0 0 0 1 1 1 0 0 0 0 3 6 5 0 0 3 0 29 1 2837.4268 B7Z8R4;Q15723-4;E9PCX3;Q15723-2;Q15723-3;Q15723-1;Q15723 B7Z8R4 161 189 ELF2 ETS-related transcription factor Elf-2 yes no 4 6.7803E-08 58.319 By matching By matching By matching By matching By matching By MS/MS 1 2274000 0 0 0 0 0 2274000 8769 196 8887 39430 26069;26070 26070 2 VVNLGVLAQK NNDPQQSKVVNLGVLA NLGVLAQKSDFCLKLE K V V Q K S 1 0 1 0 0 1 0 1 0 0 2 1 0 0 0 0 0 0 0 3 0 10 0 1039.639 Q8NI36 Q8NI36 815 824 WDR36 WD repeat-containing protein 36 yes yes 2 0.0026605 100.25 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 206200000 0 183070000 0 2206700 0 20927000 8770 1331 8888 39431;39432;39433 26071;26072 26071 2 VVNLHPLKKQPPSFPGAAEER TPTKGGWKVVNLHPLK FPGAAEERACQSLASR K V V E R A 2 1 1 0 0 1 2 1 1 0 2 2 0 1 4 1 0 0 0 2 0 21 2 2313.2593 Q12789-3;Q12789;H7BYG6 Q12789-3 522 542 GTF3C1 General transcription factor 3C polypeptide 1 yes no 4 0.0061497 43.164 By matching By matching By MS/MS By matching By matching By matching 1 1 1 5035300 0 0 1646600 1792100 1596600 0 8771 1059 8889 39434;39435;39436 26073 26073 1 VVNQGTGKDLDPNNVIIEQEER IKVSLSMKVVNQGTGK VIIEQEERRRRSFQDY K V V E R R 0 1 3 2 0 2 3 2 0 2 1 1 0 0 1 0 1 0 0 3 0 22 1 2466.235 Q9NP64-2;B4DY38;Q9NP64;E7EPF0 Q9NP64-2 65 86 ZCCHC17 Nucleolar protein of 40 kDa yes no 3 7.5389E-46 108.14 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 33354000 14462000 3025800 9430400 0 6435900 0 8772 141 8890 39437;39438;39439;39440 26074;26075;26076;26077 26074 4 VVPNPFSESGGDMK KGVCRIGKVVPNPFSE SESGGDMKEWYHIKCM K V V M K E 0 0 1 1 0 0 1 2 0 0 0 1 1 1 2 2 0 0 0 2 0 14 0 1462.6762 P49916-2;P49916 P49916-2 122 135 LIG3 DNA ligase 3 yes no 2 0.027963 52.821 By MS/MS By matching By matching By matching By matching By matching 1 13301000 13301000 0 0 0 0 0 8773 947 8891 39441 26078 26078 0 VVPPLDEDGR WARQDFSKVVPPLDED PPLDEDGRSLLSQMLH K V V G R S 0 1 0 2 0 0 1 1 0 0 1 0 0 0 2 0 0 0 0 2 0 10 0 1095.556 P24941-2;P24941;G3V5T9;E7ESI2 P24941-2 217 226 CDK2 Cyclin-dependent kinase 2 yes no 2 0.019916 63.694 By matching By matching By matching By matching By matching By MS/MS 1 1 1 8244300 0 0 867220 0 1675500 5701600 8774 589 8892 39442;39443;39444 26079 26079 1 VVPQQITHTSPR TSNIPVAKVVPQQITH QITHTSPRIQPDYPAE K V V P R I 0 1 0 0 0 2 0 0 1 1 0 0 0 0 2 1 2 0 0 2 0 12 0 1361.7415 Q9H0E3;H7BXF5;Q9H0E3-3 Q9H0E3 433 444 SAP130 Histone deacetylase complex subunit SAP130 yes no 3 0.0029725 69.216 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 1 15427000 951190 2578200 2611800 755960 4516900 4012900 8775 652 8893 39445;39446;39447;39448;39449;39450 26080;26081;26082 26082 3 VVQHLGPATDFYKK PNQRSSTKVVQHLGPA PATDFYKKLALDCSGQ K V V K K L 1 0 0 1 0 1 0 1 1 0 1 2 0 1 1 0 1 0 1 2 0 14 1 1601.8566 O95487-2;O95487;B7ZKM8 O95487-2 802 815 SEC24B Protein transport protein Sec24B yes no 4 0.0012094 64.798 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 2 1 5090000 785270 0 0 550880 2074100 1679700 8776 207 8894 39451;39452;39453;39454;39455 26083;26084;26085 26083 3 VVQNDAYTAPALPSSIR SKALPLTKVVQNDAYT PALPSSIRTKALTNMS K V V I R T 3 1 1 1 0 1 0 0 0 1 1 0 0 0 2 2 1 0 1 2 0 17 0 1800.937 Q9BY77;Q9BY77-2;B4DMM2;F8WCX5 Q9BY77 230 246 POLDIP3 Polymerase delta-interacting protein 3 yes no 2 2.7429E-22 106.57 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 1 1 1 1 87157000 35218000 19908000 0 7173700 0 24858000 8777 1465 8895 39456;39457;39458;39459 26086;26087;26088;26089 26087 4 VVQNDAYTAPALPSSIRTK SKALPLTKVVQNDAYT LPSSIRTKALTNMSRT K V V T K A 3 1 1 1 0 1 0 0 0 1 1 1 0 0 2 2 2 0 1 2 0 19 1 2030.0797 Q9BY77;Q9BY77-2;B4DMM2;F8WCX5 Q9BY77 230 248 POLDIP3 Polymerase delta-interacting protein 3 yes no 2;3 0 211.26 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 1 1 341800000 139650000 14878000 86366000 10036000 15010000 75858000 8778 1465 8896 39460;39461;39462;39463;39464;39465;39466 26090;26091;26092;26093;26094;26095 26094 6 VVQPQEEIATK RVYEEFTKVVQPQEEI PQEEIATKKLRLTKPS K V V T K K 1 0 0 0 0 2 2 0 0 1 0 1 0 0 1 0 1 0 0 2 0 11 0 1240.6663 Q96HW7;Q96HW7-2;E9PIM3;F8WAA7 Q96HW7 16 26 INTS4 Integrator complex subunit 4 yes no 2 0.011013 63.694 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 15416000 0 0 2914900 2076800 4611700 5812800 8779 1393 8897 39467;39468;39469;39470 26096 26096 1 VVRSVHYCPATK KCSLVRPKVVRSVHYC VHYCPATKKTIERRYS K V V T K K 1 1 0 0 1 0 0 0 1 0 0 1 0 0 1 1 1 0 1 3 0 12 1 1415.7344 P25205 P25205 141 152 MCM3 DNA replication licensing factor MCM3 yes yes 3 0.010429 58.781 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 2917400 122400 526250 798740 0 545180 924780 8780 873 8898 39471;39472;39473;39474;39475 26097;26098 26098 2 VVSQSQPGSRSSSPGK NRGRSRAKVVSQSQPG SRSSSPGKLLGSGYGG K V V G K L 0 1 0 0 0 2 0 2 0 0 0 1 0 0 2 6 0 0 0 2 0 16 1 1586.8012 B7ZLX3 B7ZLX3 683 698 CLASP1 yes yes 3 0.0067411 47.301 By matching By matching By MS/MS By matching By matching By matching 1 325560 0 0 325560 0 0 0 8781 211 8899 39476 26099 26099 1 VVSTHEQVLR VMDVHDGKVVSTHEQV STHEQVLRTKN_____ K V V L R T 0 1 0 0 0 1 1 0 1 0 1 0 0 0 0 1 1 0 0 3 0 10 0 1166.6408 P02533;CON__P02533 P02533 460 469 KRT14 Keratin, type I cytoskeletal 14 yes no 2 0.015978 67.08 By matching By matching By matching By MS/MS By matching By matching 1 1 1 2499900 0 0 661270 1688400 150190 0 + 8782 286 8900 39477;39478;39479 26100 26100 1 VVSTHEQVLRTK VMDVHDGKVVSTHEQV HEQVLRTKN_______ K V V T K N 0 1 0 0 0 1 1 0 1 0 1 1 0 0 0 1 2 0 0 3 0 12 1 1395.7834 P02533;CON__P02533 P02533 460 471 KRT14 Keratin, type I cytoskeletal 14 yes no 3 0.0036351 69.229 By matching By matching By matching By MS/MS By matching By matching 1 1 3514400 0 774100 0 2740300 0 0 + 8783 286 8901 39480;39481 26101 26101 1 VVTSEDQVQEGTK MLSSRDQRVVTSEDQV DQVQEGTKVLKLKTKM R V V T K V 0 0 0 1 0 2 2 1 0 0 0 1 0 0 0 1 2 0 0 3 0 13 0 1418.6889 E9PD90;Q8WWK9;C9J7Y4;Q8WWK9-3;A8MYU4 E9PD90 9 21 CKAP2 Cytoskeleton-associated protein 2 yes no 2 0.021532 47.621 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1001200 0 0 194640 0 380580 426010 8784 421 8902 39482;39483;39484 26102 26102 1 VVVDGSGQCHSTDTVK RLPDPFAKVVVDGSGQ CHSTDTVKNTLDPKWN K V V V K N 0 0 0 2 1 1 0 2 1 0 0 1 0 0 0 2 2 0 0 4 0 16 0 1687.7835 Q9HAU4 Q9HAU4 39 54 SMURF2 E3 ubiquitin-protein ligase SMURF2 yes yes 3 0.00023113 73.722 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 2521900 0 890180 0 478490 0 1153200 8785 1513 8903 39485;39486;39487 26103;26104 26104 1 VVVEPPEGEEK APASEDEKVVVEPPEG EPPEGEEKVEKAEVKE K V V E K V 0 0 0 0 0 0 4 1 0 0 0 1 0 0 2 0 0 0 0 3 0 11 0 1210.6081 F5H2G1;F5GWX5;Q14839;Q14839-2 F5H2G1 1581 1591 CHD4 Chromodomain-helicase-DNA-binding protein 4 yes no 2 4.2677E-55 139.31 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 2 2 1 92198000 1304700 31125000 26591000 1810000 3370700 27996000 8786 486 8904 39488;39489;39490;39491;39492;39493;39494;39495 26105;26106;26107;26108;26109;26110;26111;26112;26113 26112 9 VVVSTNIAETSLTIDGVVFVIDPGFAK QNGAIGRKVVVSTNIA VIDPGFAKQKVYNPRI K V V A K Q 2 0 1 2 0 0 1 2 0 3 1 1 0 2 1 2 3 0 0 6 0 27 0 2790.5055 F5H6K0;O43143 F5H6K0 406 432 DHX15 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 2 0.010246 33.676 By MS/MS By matching By matching By matching By matching By matching 1 78351000 78351000 0 0 0 0 0 8787 524 8905 39496 26114 26114 1 VVVVEQNGSFQVKIPK HSKKTVKKVVVVEQNG SFQVKIPKNFVCEHCF K V V P K N 0 0 1 0 0 2 1 1 0 1 0 2 0 1 1 1 0 0 0 5 0 16 1 1770.004 Q8NDX6 Q8NDX6 84 99 ZNF740 Zinc finger protein 740 yes yes 3 2.7486E-50 119.17 By MS/MS By matching By MS/MS By MS/MS By matching By matching 1 1 1 1 1 159380000 49913000 18868000 56197000 29973000 4425300 0 8788 1320 8906 39497;39498;39499;39500;39501 26115;26116;26117 26116 3 VVVVVPNEEDWKK LFKTFSRKVVVVVPNE PNEEDWKKRLELRKEV K V V K K R 0 0 1 1 0 0 2 0 0 0 0 2 0 0 1 0 0 1 0 5 0 13 1 1539.8297 H3BQZ7;Q1KMD3 H3BQZ7 559 571 hCG_2044799;HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes no 3 0.0011548 70.563 By matching By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 12651000 0 6072700 0 4699700 1878800 0 8789 640 8907 39502;39503;39504 26118;26119;26120 26119 3 VVWNSSTVQQK ETAPAVQRVVWNSSTV NSSTVQQKEITQSPST R V V Q K E 0 0 1 0 0 2 0 0 0 0 0 1 0 0 0 2 1 1 0 3 0 11 0 1274.6619 Q9ULU4-14;Q2HXV3;Q9ULU4-12;Q9ULU4-13;H7C4X9;Q9ULU4-9;F8WAN7;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;H7C0U2 Q9ULU4-14 812 822 ZMYND8 Protein kinase C-binding protein 1 yes no 2 0.00036285 97.452 By matching By matching By matching By matching By matching By MS/MS 1 1 1604000 0 0 0 0 294040 1309900 8790 1160 8908 39505;39506 26121 26121 1 VVWVEESDK TSENITQKVVWVEESD VWVEESDKRSFLLDLL K V V D K R 0 0 0 1 0 0 2 0 0 0 0 1 0 0 0 1 0 1 0 3 0 9 0 1089.5342 O00571;O00571-2 O00571 419 427 DDX3X ATP-dependent RNA helicase DDX3X yes no 2 0.0061685 93.178 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 20357000 545650 2330500 935690 0 3590500 12954000 8791 693 8909 39507;39508;39509;39510;39511 26122 26122 1 VVWVEESDKR TSENITQKVVWVEESD WVEESDKRSFLLDLLN K V V K R S 0 1 0 1 0 0 2 0 0 0 0 1 0 0 0 1 0 1 0 3 0 10 1 1245.6354 O00571;O00571-2 O00571 419 428 DDX3X ATP-dependent RNA helicase DDX3X yes no 3 0.025739 51.276 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 7191400 647570 1369400 432780 0 427570 4314100 8792 693 8910 39512;39513;39514;39515;39516 26123;26124 26123 2 VWDPDNPLTDR NQQKMEMKVWDPDNPL PDNPLTDRQIDQFLVV K V W D R Q 0 1 1 3 0 0 0 0 0 0 1 0 0 0 2 0 1 1 0 1 0 11 0 1326.6204 O94776;Q68DB1 O94776 178 188 MTA2;DKFZp686F2281 Metastasis-associated protein MTA2 yes no 2 1.7029E-05 104.82 By matching By MS/MS By matching By matching By matching By matching 1 10943000 0 10943000 0 0 0 0 8793 754 8911 39517 26125 26125 1 VWLDPNETNEIANANSRQQIRK VLRCGKKKVWLDPNET NSRQQIRKLIKDGLII K V W R K L 2 2 4 1 0 2 2 0 0 2 1 1 0 0 1 1 1 1 0 1 0 22 2 2595.3154 P84098 P84098 22 43 RPL19 60S ribosomal protein L19 yes yes 4 4.6236E-06 72.359 By matching By MS/MS By matching By matching By matching By matching 1 2907400 0 2907400 0 0 0 0 8794 1016 8912 39518 26126 26126 1 VWLDQKEDDK SKKSQPEKVWLDQKED LDQKEDDKKYMKSLQK K V W D K K 0 0 0 3 0 1 1 0 0 0 1 2 0 0 0 0 0 1 0 1 0 10 1 1274.6143 Q5VVJ2 Q5VVJ2 85 94 MYSM1 Histone H2A deubiquitinase MYSM1 yes yes 3 0.0054033 86.882 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 7170400 596590 0 1624900 1214000 1827600 1907400 8795 1207 8913 39519;39520;39521;39522;39523 26127;26128;26129 26128 3 VYACEVTHQGLSSPVTK KADYEKHKVYACEVTH GLSSPVTKSFNRGEC_ K V Y T K S 1 0 0 0 1 1 1 1 1 0 1 1 0 0 1 2 2 0 1 3 0 17 0 1874.9196 P01834 P01834 83 99 IGKC Ig kappa chain C region yes yes 3 0.00067875 70.41 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 6793300 680760 1105400 3442600 865770 698870 0 8796 782 8914 39524;39525;39526;39527;39528 26130 26130 1 VYAENAIR QKNVECARVYAENAIR VYAENAIRKKNEGVNW R V Y I R K 2 1 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 1 0 8 0 934.48723 F8VUA2;Q9HD42;F8VVT7 F8VUA2 47 54 CHMP1A Charged multivesicular body protein 1a yes no 2 0.0079613 98.523 By matching By matching By matching By matching By matching By MS/MS 1 1 7085200 0 1217800 0 0 0 5867300 8797 541 8915 39529;39530 26131 26131 1 VYALPEDLVEVKPK MARRIGARVYALPEDL DLVEVKPKMVMTVFAC R V Y P K M 1 0 0 1 0 0 2 0 0 0 2 2 0 0 2 0 0 0 1 3 0 14 1 1598.892 B7Z6M1;F8W8D8;B4DGB4;P13797;B4DI60 B7Z6M1 555 568 PLS3 Plastin-3 yes no 3 0.0032525 60.364 By matching By MS/MS By matching By matching By matching By matching 1 10275000 0 10275000 0 0 0 0 8798 87 8916 39531 26132 26132 1 VYAVATSTNTPCAR VAYHVESKVYAVATST STNTPCARIPRMTGEE K V Y A R I 3 1 1 0 1 0 0 0 0 0 0 0 0 0 1 1 3 0 1 2 0 14 0 1509.7246 Q10570 Q10570 1033 1046 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 2 0.017005 78.814 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 8799 1057 8917 39532 26133 26133 1 VYAVATSTNTPCARIPR VAYHVESKVYAVATST TPCARIPRMTGEEKEF K V Y P R M 3 2 1 0 1 0 0 0 0 1 0 0 0 0 2 1 3 0 1 2 0 17 1 1875.9625 Q10570 Q10570 1033 1049 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 yes yes 3 0.0027559 52.5 By matching By matching By matching By matching By matching By MS/MS 1 2376400 0 0 0 0 0 2376400 8800 1057 8918 39533 26134 26134 1 VYEELRATGAAAAEAK TAAERLEKVYEELRAT GAAAAEAKARRILAGL K V Y A K A 6 1 0 0 0 0 3 1 0 0 1 1 0 0 0 0 1 0 1 1 0 16 1 1648.842 E9PC67;F8VQZ0;Q8NE71;Q8NE71-2;H0YGW7 Q8NE71 415 430 ABCF1 ATP-binding cassette sub-family F member 1 no no 3 0.016946 41.621 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 8048700 0 1521500 0 551010 2282900 3693300 8801 1321;411 8919 39534;39535;39536;39537 26135 26135 1 VYENYPTYDLTER TMKQICKKVYENYPTY PTYDLTERKDFIKTTV K V Y E R K 0 1 1 1 0 0 2 0 0 0 1 0 0 0 1 0 2 0 3 1 0 13 0 1661.7573 P35659;P35659-2;B4DFG0;H0Y993 P35659 350 362 DEK Protein DEK yes no 2 0.012023 53.448 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 10220000 4547300 0 3827200 0 1845600 0 8802 901 8920 39538;39539;39540 26136;26137 26136 2 VYENYPTYDLTERK TMKQICKKVYENYPTY TYDLTERKDFIKTTVK K V Y R K D 0 1 1 1 0 0 2 0 0 0 1 1 0 0 1 0 2 0 3 1 0 14 1 1789.8523 P35659;P35659-2;B4DFG0;H0Y993 P35659 350 363 DEK Protein DEK yes no 2;3 0.00035887 86.756 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 3 3 2 4 2 222590000 29192000 36544000 48587000 21197000 8645700 78426000 8803 901 8921 39541;39542;39543;39544;39545;39546;39547;39548;39549;39550;39551;39552;39553;39554;39555 26138;26139;26140;26141;26142;26143;26144;26145 26138 7 VYENYPTYDLTERKDFIK TMKQICKKVYENYPTY TERKDFIKTTVKELIS K V Y I K T 0 1 1 2 0 0 2 0 0 1 1 2 0 1 1 0 2 0 3 1 0 18 2 2293.1267 P35659;P35659-2;B4DFG0;H0Y993 P35659 350 367 DEK Protein DEK yes no 4 0.001451 61.165 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 83535000 29943000 0 0 35224000 0 18368000 8804 901 8922 39556;39557;39558 26146;26147;26148 26146 3 VYGNIRAVASR ILGNPPSKVYGNIRAV NIRAVASRSADRF___ K V Y S R S 2 2 1 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 1 2 0 11 1 1204.6677 Q9NRX1 Q9NRX1 237 247 PNO1 RNA-binding protein PNO1 yes yes 3 0.017384 57.785 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 9554300 1498000 1570300 1925100 1960900 2599900 0 8805 1538 8923 39559;39560;39561;39562;39563 26149 26149 1 VYIMPKPARR IPFSKPVKVYIMPKPA IMPKPARR________ K V Y R R - 1 2 0 0 0 0 0 0 0 1 0 1 1 0 2 0 0 0 1 1 0 10 2 1229.7067 Q96HW7;Q96HW7-4 Q96HW7 954 963 INTS4 Integrator complex subunit 4 yes no 3 0.0102 89.698 By matching By matching By matching By matching By matching By MS/MS 1 1 1937600 0 0 0 0 728780 1208900 8806 1393 8924 39564;39565 26150 26150 1 VYLSGKAVPLTVAK WLPECHNKVYLSGKAV AVPLTVAKSQFSRSSK K V Y A K S 2 0 0 0 0 0 0 1 0 0 2 2 0 0 1 1 1 0 1 3 0 14 1 1444.8654 Q96GM8;B4DEM6 Q96GM8 476 489 TOE1 Target of EGR1 protein 1 yes no 3 0.0011291 71.558 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 1 8513400 7452700 482490 0 578240 0 0 8807 1389 8925 39566;39567;39568 26151;26152 26151 2 VYNYNHLMPTRYSVDIPLDK SKIKSFVKVYNYNHLM SVDIPLDKTVVNKDVF K V Y D K T 0 1 2 2 0 0 0 0 1 1 2 1 1 0 2 1 1 0 3 2 0 20 1 2437.21 P61353 P61353 74 93 RPL27 60S ribosomal protein L27 yes yes 4 0.001181 53.21 By matching By matching By matching By matching By MS/MS By matching 1 137850000 0 0 0 0 137850000 0 8808 982 8926 39569 26153 26153 1 VYTCTICSR THTVKHAKVYTCTICS YTCTICSRAYTSETYL K V Y S R A 0 1 0 0 2 0 0 0 0 1 0 0 0 0 0 1 2 0 1 1 0 9 0 1158.5162 Q8TF68-3;F8W6Q3;Q8TF68-2;Q8TF68 Q8TF68-3 316 324 ZNF384 Zinc finger protein 384 yes no 2 1.0865E-07 118.71 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 1 59337000 14470000 5022900 8346200 6747400 13279000 11472000 8809 555 8927 39570;39571;39572;39573;39574;39575;39576 26154;26155;26156;26157;26158;26159 26158 6 VYTLSVSGDR GTFSQPEKVYTLSVSG TLSVSGDRLIVGTAGR K V Y D R L 0 1 0 1 0 0 0 1 0 0 1 0 0 0 0 2 1 0 1 2 0 10 0 1095.556 O43684-2;O43684;B4DDM6 O43684-2 140 149 BUB3 Mitotic checkpoint protein BUB3 yes no 2 0.0086316 80.706 By matching By matching By matching By matching By matching By MS/MS 1 1669600 0 0 0 0 0 1669600 8810 719 8928 39577 26160 26160 1 VYTLSVSGDRLIVGTAGRR GTFSQPEKVYTLSVSG IVGTAGRRVLVWDLRN K V Y R R V 1 3 0 1 0 0 0 3 0 1 2 0 0 0 0 2 2 0 1 3 0 19 2 2019.1225 O43684-2;O43684;B4DDM6 O43684-2 140 158 BUB3 Mitotic checkpoint protein BUB3 yes no 3;4 0.00098434 80.459 By matching By matching By matching By MS/MS By matching By MS/MS 1 2 94550000 0 0 0 7567500 0 86982000 8811 719 8929 39578;39579;39580 26161;26162;26163 26162 3 VYVGNLGNNGNK DSCPLDCKVYVGNLGN NLGNNGNKTELERAFG K V Y N K T 0 0 4 0 0 0 0 3 0 0 1 1 0 0 0 0 0 0 1 2 0 12 0 1247.6258 B4E241;P84103 B4E241 12 23 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 yes no 2 4.1493E-50 131.09 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 122900000 0 14659000 8441500 4742600 17903000 77155000 8812 160 8930 39581;39582;39583;39584;39585 26164;26165;26166;26167;26168 26168 5 VYVGNLGNNGNKTELER DSCPLDCKVYVGNLGN GNKTELERAFGYYGPL K V Y E R A 0 1 4 0 0 0 2 3 0 0 2 1 0 0 0 0 1 0 1 2 0 17 1 1875.9439 B4E241;P84103 B4E241 12 28 SFRS3;SRSF3 Serine/arginine-rich splicing factor 3 yes no 3 0.0021642 65.511 By MS/MS By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 8771100 961500 2630200 1475400 0 0 3704000 8813 160 8931 39586;39587;39588;39589 26169;26170;26171 26169 3 WASDEMPSTSNGESSK RITPEFSKWASDEMPS TSNGESSKQEAMQKTC K W A S K Q 1 0 1 1 0 0 2 1 0 0 0 1 1 0 1 5 1 1 0 0 0 16 0 1711.6995 Q5TDE7;Q5TDE8;B4DLZ9;Q5VTB9 Q5TDE7 168 183 RNF220 E3 ubiquitin-protein ligase RNF220 yes no 2 0.01235 44.045 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2884700 0 0 738650 0 214790 1931300 8814 101 8932 39590;39591;39592 26172;26173 26173 2 WAVIQGQAVRK LCDLERERWAVIQGQA IQGQAVRKSSTVATLQ R W A R K S 2 1 0 0 0 2 0 1 0 1 0 1 0 0 0 0 0 1 0 2 0 11 1 1254.7197 Q8IVT2 Q8IVT2 144 154 MISP Mitotic interactor and substrate of PLK1 yes yes 3 0.0066156 61.593 By matching By matching By matching By matching By matching By MS/MS 1 2258900 0 0 0 0 0 2258900 8815 1278 8933 39593 26174 26174 1 WCDCKLPNSK QRHMIDGRWCDCKLPN DCKLPNSKQSQDEPLR R W C S K Q 0 0 1 1 2 0 0 0 0 0 1 2 0 0 1 1 0 1 0 0 0 10 1 1306.5798 Q13148;Q13148-2;B1AKP7;G3V162;B4DJ45 Q13148 172 181 TARDBP TAR DNA-binding protein 43 yes no 3 0.0042885 88.155 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 9783500 0 0 1819100 859410 0 7104900 8816 1073 8934 39594;39595;39596 26175;26176 26176 2 WCPTTNKPVKSPTPTVNPR MKANPGYKWCPTTNKP PTPTVNPRKKLWAFPS K W C P R K 0 1 2 0 1 0 0 0 0 0 0 2 0 0 5 1 4 1 0 2 0 19 2 2179.1208 C9JA69;Q8WY36-2;Q8WY36;C9J8D0;C9JYU6;C9JZA0;A2RRM7 C9JA69 149 167 BBX HMG box transcription factor BBX yes no 4 0.00095274 60.307 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 7381100 825520 1317400 985130 615500 1254500 2383100 8817 238 8935 39597;39598;39599;39600;39601;39602 26177;26178 26177 2 WDLSELPKFEK GERLRKKKWDLSELPK SELPKFEKNFYVEHPE K W D E K N 0 0 0 1 0 0 2 0 0 0 2 2 0 1 1 1 0 1 0 0 0 11 1 1390.7133 Q92841-1;Q92841;Q92841-2;C9JMU5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 43 53 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 3 0.021984 54.772 By matching By matching By matching By matching By MS/MS By matching 1 175340000 0 0 0 0 175340000 0 8818 1361;629 8936 39603 26179 26179 1 WEAVDESELEAQAVTTSK IFKVAPSKWEAVDESE AQAVTTSKWELFDQHE K W E S K W 3 0 0 1 0 1 4 0 0 0 1 1 0 0 0 2 2 1 0 2 0 18 0 1991.9324 O15042-2;E7ET15;O15042;H7C4V2;C9JB80;O15042-3 O15042-2 760 777 U2SURP U2 snRNP-associated SURP motif-containing protein yes no 2 4.759E-14 99.011 By matching By MS/MS By matching By MS/MS By matching By matching 1 1 14587000 0 9552300 0 5034300 0 0 8819 378 8937 39604;39605 26180;26181 26181 2 WEGLVYAPPGKEK QEEEKSGKWEGLVYAP YAPPGKEKQRKTEELE K W E E K Q 1 0 0 0 0 0 2 2 0 0 1 2 0 0 2 0 0 1 1 1 0 13 1 1472.7664 Q9Y2W1 Q9Y2W1 471 483 THRAP3 Thyroid hormone receptor-associated protein 3 yes yes 2;3 0.0030088 64.313 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 119760000 33015000 6996300 37178000 12619000 14920000 15037000 8820 1639 8938 39606;39607;39608;39609;39610;39611;39612;39613;39614;39615;39616 26182;26183;26184;26185;26186;26187;26188;26189 26189 8 WEQQLQEEQEQK LVIERERKWEQQLQEE LQEEQEQKRLQAEAEE K W E Q K R 0 0 0 0 0 5 4 0 0 0 1 1 0 0 0 0 0 1 0 0 0 12 0 1601.7322 E9PMS6;Q8WWI1-3;E9PMT2;Q8WWI1;E9PLH4;Q8WWI1-4;F8WD26;Q8WWI1-2;H0YDQ3;E9PMP7;H0Y424 E9PMS6 942 953 LMO7 LIM domain only protein 7 yes no 2 0.0030011 72.29 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2608000 0 654140 803500 0 484820 665590 8821 460 8939 39617;39618;39619;39620 26190 26190 1 WEQQVSAADGKPGRQSR HLLHLRERWEQQVSAA GKPGRQSRKEVTQATQ R W E S R K 2 2 0 1 0 3 1 2 0 0 0 1 0 0 1 2 0 1 0 1 0 17 2 1898.9347 Q6W2J9;Q6W2J9-4;Q6W2J9-2;H7BYY2;A6NE70;H7C2V9 Q6W2J9 1218 1234 BCOR BCL-6 corepressor yes no 4 0.011704 41.359 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 6275300 923120 624860 793660 499040 1612200 1822500 8822 1237 8940 39621;39622;39623;39624;39625;39626 26191 26191 1 WFPAVCAHSK YQAKVGGRWFPAVCAH PAVCAHSKKQGKQEAA R W F S K K 2 0 0 0 1 0 0 0 1 0 0 1 0 1 1 1 0 1 0 1 0 10 0 1201.5702 P55265;P55265-4;E7ENU4;P55265-5;H0YCK3;P55265-2;P55265-3 P55265 768 777 ADAR Double-stranded RNA-specific adenosine deaminase no no 2;3 0.0090185 72.321 By matching By MS/MS By matching By MS/MS By MS/MS By matching 2 2 2 1 2 16455000 0 3234700 2794000 2484900 740160 7200800 8823 352;968 8941 39627;39628;39629;39630;39631;39632;39633;39634;39635 26192;26193;26194;26195 26192 4 WGEEEAELNK DITGQFEKWGEEEAEL EEEAELNKNFYDKKTA K W G N K N 1 0 1 0 0 0 4 1 0 0 1 1 0 0 0 0 0 1 0 0 0 10 0 1203.5408 P49589;P49589-3;P49589-2;B4DKY1;A8MVQ3 P49589 483 492 CARS Cysteine--tRNA ligase, cytoplasmic yes no 2 0.021394 62.466 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 3626500 0 728410 309230 433020 1194000 961800 8824 938 8942 39636;39637;39638;39639;39640 26196;26197 26197 2 WGETTFMAK KRTTLSTKWGETTFMA GETTFMAKLGQKRPNF K W G A K L 1 0 0 0 0 0 1 1 0 0 0 1 1 1 0 0 2 1 0 0 0 9 0 1069.4903 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 35 43 WAPAL Wings apart-like protein homolog yes no 2 0.021781 68.846 By MS/MS By matching By matching By matching By matching By matching 1 6964200 6964200 0 0 0 0 0 8825 1253 8943 39641 26198 26198 1 WGQASSDRAAVCGECGK PRLLGEPRWGQASSDR AVCGECGKSFRQMSDL R W G G K S 3 1 0 1 2 1 1 3 0 0 0 1 0 0 0 2 0 1 0 1 0 17 1 1837.7836 Q96MX3;E9PQ92;E9PJ50 Q96MX3 103 119 ZNF48 Zinc finger protein 48 yes no 3 0.0036246 50.305 By matching By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 18269000 2444800 2603400 3229500 1962300 4215400 3814000 8826 1408 8944 39642;39643;39644;39645;39646;39647 26199;26200;26201 26201 3 WGTLTDCVVMRDPQTK SLREHFEKWGTLTDCV VMRDPQTKRSRGFGFV K W G T K R 0 1 0 2 1 1 0 1 0 0 1 1 1 0 1 0 3 1 0 2 0 16 1 1905.9077 E7EWI9;E7ERJ4;P51991-2;P51991 E7EWI9 36 51 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 2;3 8.76E-51 124.25 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 1 3 2 904080000 116070000 79554000 126770000 100170000 162500000 319000000 8827 371;955 8945 39648;39649;39650;39651;39652;39653;39654;39655;39656;39657;39658 26202;26203;26204;26205;26206;26207;26208;26209;26210 26204 9 WLAEPNCVRR KVQPFLPRWLAEPNCV AEPNCVRRNVTEDLVP R W L R R N 1 2 1 0 1 0 1 0 0 0 1 0 0 0 1 0 0 1 0 1 0 10 1 1299.6506 Q8N8A6 Q8N8A6 181 190 DDX51 ATP-dependent RNA helicase DDX51 yes yes 3 0.014444 58.23 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 1 8353800 578210 1187600 641810 772530 2702100 2471500 8828 1308 8946 39659;39660;39661;39662;39663;39664 26211;26212 26212 2 WLQDNLTLRK DTQKIQERWLQDNLTL QDNLTLRKRNEELKEV R W L R K R 0 1 1 1 0 1 0 0 0 0 3 1 0 0 0 0 1 1 0 0 0 10 1 1285.7143 Q92878-2;Q92878;Q92878-3 Q92878-2 1023 1032 RAD50 DNA repair protein RAD50 yes no 3 0.025739 51.276 By MS/MS By matching By matching By matching By matching By matching 1 6605000 6605000 0 0 0 0 0 8829 1362 8947 39665 26213 26213 1 WMEEQAQSLIDK NVKDYYQKWMEEQAQS QAQSLIDKTTAAFQQG K W M D K T 1 0 0 1 0 2 2 0 0 1 1 1 1 0 0 1 0 1 0 0 0 12 0 1476.6919 P09234 P09234 41 52 SNRPC U1 small nuclear ribonucleoprotein C yes yes 2 0.0015674 90.689 By matching By matching By matching By MS/MS By matching By matching 1 4702600 0 0 0 4702600 0 0 8830 811 8948 39666 26214 26214 1 WMPFTNPARK SKKVRPWKWMPFTNPA PFTNPARKDGAMFFHW K W M R K D 1 1 1 0 0 0 0 0 0 0 0 1 1 1 2 0 1 1 0 0 0 10 1 1246.6281 Q5TG40;Q9NPF5;Q5TG37;Q5TG38;Q5TG36;Q5TG39 Q5TG40 97 106 DMAP1 DNA methyltransferase 1-associated protein 1 yes no 3 0.022763 52.49 By matching By matching By matching By matching By matching By MS/MS 1 1279100 0 0 0 0 0 1279100 8831 1198 8949 39667 26215 26215 1 WNENVQYLSEDR PDKVFAEKWNENVQYL VQYLSEDRSVQEVLQK K W N D R S 0 1 2 1 0 1 2 0 0 0 1 0 0 0 0 1 0 1 1 1 0 12 0 1551.6954 O43929;B7Z632;B7Z3D0;F5H069 O43929 249 260 ORC4;ORC4L Origin recognition complex subunit 4 yes no 2 0.003546 69.352 By matching By MS/MS By matching By matching By matching By matching 1 1 2396300 0 490240 0 0 0 1906000 8832 725 8950 39668;39669 26216 26216 1 WNQDTMEQK SKKRKRSRWNQDTMEQ NQDTMEQKTVIPGMPT R W N Q K T 0 0 1 1 0 2 1 0 0 0 0 1 1 0 0 0 1 1 0 0 0 9 0 1178.5026 Q15637-6;Q15637-4;Q15637-3;Q15637-2;Q15637;Q14820;F8WEV5 Q15637-6 22 30 SF1 Splicing factor 1 no no 2 0.0097071 100.02 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 17208000 1115300 1761300 1273500 937770 5059000 7060700 8833 1141 8951 39670;39671;39672;39673;39674;39675 26217;26218 26218 2 WQQFNNR EREDQKVKWQQFNNRA KWQQFNNRAYSKNKKG K W Q N R A 0 1 2 0 0 2 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 7 0 991.46241 O75940 O75940 178 184 SMNDC1 Survival of motor neuron-related-splicing factor 30 yes yes 2 0.016461 108.98 By matching By matching By matching By matching By matching By MS/MS 1 1 2918300 585160 0 0 0 0 2333100 8834 751 8952 39676;39677 26219 26219 1 WQYCGAPDGSQR AEVLPSARWQYCGAPD GAPDGSQRAVLVQFSN R W Q Q R A 1 1 0 1 1 2 0 2 0 0 0 0 0 0 1 1 0 1 1 0 0 12 0 1423.5939 Q9GZS1-2;B4DW33 Q9GZS1-2 11 22 POLR1E DNA-directed RNA polymerase I subunit RPA49 yes no 2 0.0017988 79.283 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 5172900 0 766880 517650 221000 1565000 2102400 8835 1475 8953 39678;39679;39680;39681;39682 26220;26221;26222;26223;26224 26221 5 WRPGDADGTDCTSIGTIEQK TADQQEAKWRPGDADG SIGTIEQKSSEDQGIK K W R Q K S 1 1 0 3 1 1 1 3 0 2 0 1 0 0 1 1 3 1 0 0 0 20 1 2205.9961 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 340 359 DIDO1 Death-inducer obliterator 1 yes no 3 4.0826E-101 135.49 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 14996000 6258800 0 4172800 0 1315000 3249300 8836 1447 8954 39683;39684;39685;39686 26225;26226;26227 26227 3 WSATSPHVPK KSGVTCQKWSATSPHV ATSPHVPKFSPEKFPL K W S P K F 1 0 0 0 0 0 0 0 1 0 0 1 0 0 2 2 1 1 0 1 0 10 0 1108.5665 CON__P06868 CON__P06868 134 143 yes yes 2 0.010869 72.2 By MS/MS By MS/MS By matching By matching By matching By matching 2 1 1 1 1 33611000 10638000 6394200 0 2957800 6482400 7138800 + 8837 295 8955 39687;39688;39689;39690;39691;39692 26228;26229 26228 2 WTHDKYQGDGIVEDEEETMENNEEK KKSGSSPKWTHDKYQG TMENNEEKKDRRKEEK K W T E K K 0 0 2 3 0 1 7 2 1 1 0 2 1 0 0 0 2 1 1 1 0 25 1 3024.2567 Q9NYF8-2;Q9NYF8;Q9NYF8-4;H0YF14;Q9NYF8-3;E9PK91;H0YF63 Q9NYF8-2 885 909 BCLAF1 Bcl-2-associated transcription factor 1 no no 4 0.00061779 52.754 By MS/MS By matching By matching By matching By matching By matching 1 5493800 5493800 0 0 0 0 0 8838 1563;452 8956 39693 26230 26230 1 WTPVGPAPSTSQSQK GGSHQSSKWTPVGPAP PSTSQSQKRSSGLQSG K W T Q K R 1 0 0 0 0 2 0 1 0 0 0 1 0 0 3 3 2 1 0 1 0 15 0 1569.7787 Q9UHB7;Q9UHB7-2;Q9UHB7-3;C9JCE0 Q9UHB7 108 122 AFF4 AF4/FMR2 family member 4 yes no 2 0.0024311 66.246 By MS/MS By MS/MS By MS/MS By matching By matching By matching 1 2 1 1 1 1 23112000 3900800 6032800 2222000 3066400 2842500 5048000 8839 1592 8957 39694;39695;39696;39697;39698;39699;39700 26231;26232;26233 26233 3 WTSQHSNTQTLGK QPVREDAKWTSQHSNT SNTQTLGK________ K W T G K - 0 0 1 0 0 2 0 1 1 0 1 1 0 0 0 2 3 1 0 0 0 13 0 1486.7165 Q6PKG0-3;Q6PKG0 Q6PKG0-3 1007 1019 LARP1 La-related protein 1 yes no 3 0.0018598 69.03 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 3870300 0 1001200 854220 484020 337110 1193700 8840 1233 8958 39701;39702;39703;39704;39705 26234 26234 1 WVGDLPNGRVCP KDIPVLPKWVGDLPNG LPNGRVCP________ K W V C P - 0 1 1 1 1 0 0 2 0 0 1 0 0 0 2 0 0 1 0 2 0 12 1 1368.6609 F8VV13;Q96DR8 F8VV13 74 85 MUCL1 Mucin-like protein 1 yes no 2 0.0047268 82.505 By matching By MS/MS By matching By matching By matching By matching 1 10061000 0 10061000 0 0 0 0 8841 543 8959 39706 26235 26235 1 WVHAEMVNKNSELK SSSKEHVKWVHAEMVN VNKNSELKLIYVTPEK K W V L K L 1 0 2 0 0 0 2 0 1 0 1 2 1 0 0 1 0 1 0 2 0 14 1 1683.8403 P46063;F8WA66;F8WD97 P46063 172 185 RECQL ATP-dependent DNA helicase Q1 yes no 3 0.024471 43.594 By matching By matching By matching By matching By MS/MS By matching 1 1 2290400 0 0 0 391060 1899400 0 8842 922 8960 39707;39708 26236 26236 1 WYCQMCQK SKGLQKLRWYCQMCQK WYCQMCQKQCRDENGF R W Y Q K Q 0 0 0 0 2 2 0 0 0 0 0 1 1 0 0 0 0 1 1 0 0 8 0 1202.4671 B4DX32;O60870 B4DX32 26 33 KIN DNA/RNA-binding protein KIN17 yes no 2 0.014193 89.296 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 9905500 233790 972610 1212700 1002800 2305700 4178000 8843 136 8961 39709;39710;39711;39712;39713;39714 26237;26238 26237 2 YAALSDQGLDIK KVRPSASRYAALSDQG SDQGLDIKAAFQPEAN R Y A I K A 2 0 0 2 0 1 0 1 0 1 2 1 0 0 0 1 0 0 1 0 0 12 0 1292.6612 Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-5;Q8WX93-4;Q8WX93-7 Q8WX93-3 966 977 PALLD Palladin yes no 2 0.0018284 83.137 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 32621000 0 22705000 0 0 0 9915800 8844 1343 8962 39715;39716 26239;26240 26240 2 YACGLWGLSPASRK MGKSVPGKYACGLWGL GLSPASRKRYDAATTY K Y A R K R 2 1 0 0 1 0 0 2 0 0 2 1 0 0 1 2 0 1 1 0 0 14 1 1564.782 H7C561;Q15637-6;H7C0N4 Q15637-6 455 468 SF1 Splicing factor 1 no no 2;3 1.5681E-55 128.21 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 2 1 73796000 18737000 10996000 15361000 15228000 13474000 0 8845 1141;674;664 8963 39717;39718;39719;39720;39721;39722 26241;26242;26243;26244;26245 26243 5 YAFELVDK YEESKVSKYAFELVDK YAFELVDKQALLDSEG K Y A D K Q 1 0 0 1 0 0 1 0 0 0 1 1 0 1 0 0 0 0 1 1 0 8 0 983.4964 Q9UQR1 Q9UQR1 425 432 ZNF148 Zinc finger protein 148 yes yes 2 0.007944 104.06 By matching By MS/MS By matching By matching By matching By matching 1 1 14126000 0 13071000 0 1055700 0 0 8846 1626 8964 39723;39724 26246 26246 1 YAGGNPVCVRPTPK SSRKAENKYAGGNPVC VCVRPTPKWQKGIGEF K Y A P K W 1 1 1 0 1 0 0 2 0 0 0 1 0 0 3 0 1 0 1 2 0 14 1 1514.7664 Q15004;H0YMA4;H0YKX3 Q15004 47 60 KIAA0101 PCNA-associated factor yes no 2;3 0.0024465 80.905 By matching By MS/MS By MS/MS By matching By matching By MS/MS 2 1 2 1 2 54898000 2930200 1516700 9847600 0 6919500 33684000 8847 1124 8965 39725;39726;39727;39728;39729;39730;39731;39732 26247;26248;26249;26250;26251 26249 5 YALTGDEVK IFLRNRLKYALTGDEV ALTGDEVKKICMQRFI K Y A V K K 1 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 1 0 1 1 0 9 0 994.49713 P62701;Q8TD47;A6NH36;C9JEH7;P22090;C9JQ55 P62701 54 62 RPS4X;RPS4Y2;RPS4Y1;RPS4XP21 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 2 0.030559 64.711 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 1 5812500 687280 436830 545350 525590 2139400 1478000 8848 993 8966 39733;39734;39735;39736;39737;39738 26252 26252 1 YALTGDEVKK IFLRNRLKYALTGDEV LTGDEVKKICMQRFIK K Y A K K I 1 0 0 1 0 0 1 1 0 0 1 2 0 0 0 0 1 0 1 1 0 10 1 1122.5921 P62701;Q8TD47;A6NH36;C9JEH7;P22090;C9JQ55 P62701 54 63 RPS4X;RPS4Y2;RPS4Y1;RPS4XP21 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 2;40S ribosomal protein S4, Y isoform 1 yes no 2 0.00032318 107.21 By matching By matching By matching By matching By MS/MS By matching 1 1 1 2821300 563910 0 0 500020 1757400 0 8849 993 8967 39739;39740;39741 26253 26253 1 YALYDASFETK MLPEKDCRYALYDASF YDASFETKESRKEELM R Y A T K E 2 0 0 1 0 0 1 0 0 0 1 1 0 1 0 1 1 0 2 0 0 11 0 1306.6081 P60981;P60981-2;F6RFD5 P60981 82 92 DSTN Destrin yes no 2 0.034276 67.749 By matching By MS/MS By matching By matching By matching By matching 1 6039700 0 6039700 0 0 0 0 8850 980 8968 39742 26254 26254 0 YALYDATYETK MLPDKDCRYALYDATY YDATYETKESKKEDLV R Y A T K E 2 0 0 1 0 0 1 0 0 0 1 1 0 0 0 0 2 0 3 0 0 11 0 1336.6187 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;G3V5P4;Q9Y281 E9PP50 82 92 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 2 4.2677E-55 139.31 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 58046000 5490300 9940600 14118000 2258400 2973000 23266000 8851 461 8969 39743;39744;39745;39746;39747;39748 26255;26256;26257;26258;26259;26260 26257 6 YALYDATYETKESK MLPDKDCRYALYDATY TYETKESKKEDLVFIF R Y A S K K 2 0 0 1 0 0 2 0 0 0 1 2 0 0 0 1 2 0 3 0 0 14 1 1680.7883 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;G3V5P4;Q9Y281 E9PP50 82 95 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 2 0.0038784 68.972 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 4400600 0 374190 1024200 386520 859080 1756600 8852 461 8970 39749;39750;39751;39752;39753 26261;26262 26262 2 YALYDATYETKESKK MLPDKDCRYALYDATY YETKESKKEDLVFIFW R Y A K K E 2 0 0 1 0 0 2 0 0 0 1 3 0 0 0 1 2 0 3 0 0 15 2 1808.8832 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;G3V5P4;Q9Y281 E9PP50 82 96 CFL1;CFL2 Cofilin-1;Cofilin-2 yes no 3 0.024363 49.298 By matching By matching By MS/MS By matching By MS/MS By matching 1 1 1 1 1 1 4871800 1429600 376810 1021800 627440 558790 857320 8853 461 8971 39754;39755;39756;39757;39758;39759 26263;26264 26264 2 YASETLQAQSEEAR KKMELLQKYASETLQA QAQSEEARRLLGY___ K Y A A R R 3 1 0 0 0 2 3 0 0 0 1 0 0 0 0 2 1 0 1 0 0 14 0 1581.7271 Q9ULR0;Q9ULR0-2;Q9ULR0-1 Q9ULR0 267 280 ISY1 Pre-mRNA-splicing factor ISY1 homolog yes no 2 6.0855E-05 91.712 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 2492800 0 508730 731840 0 0 1252200 8854 1610 8972 39760;39761;39762 26265;26266;26267 26266 3 YASFQVENDQER LTGGSVYKYASFQVEN QVENDQERFLSDLRRD K Y A E R F 1 1 1 1 0 2 2 0 0 0 0 0 0 1 0 1 0 0 1 1 0 12 0 1484.6532 E7EP00;G5EA31;P53992 E7EP00 604 615 SEC24C Protein transport protein Sec24C yes no 2 0.0061915 63.091 By matching By matching By matching By matching By matching By MS/MS 1 838190 0 0 0 0 0 838190 8855 354 8973 39763 26268 26268 1 YASNLPGSLLKEQK QKRGPGFKYASNLPGS GSLLKEQKMNRDNKEG K Y A Q K M 1 0 1 0 0 1 1 1 0 0 3 2 0 0 1 2 0 0 1 0 0 14 1 1546.8355 B4DSN4;Q8NHM5-4;Q8NHM5-2;E7ET57;Q8NHM5-3;E7EML5;Q8NHM5 B4DSN4 182 195 KDM2B Lysine-specific demethylase 2B yes no 3 0.027637 42.317 By MS/MS By matching By matching By matching By matching By matching 1 3497400 3497400 0 0 0 0 0 8856 124 8974 39764 26269 26269 1 YAVQICK INLKQQLKYAVQICKG KYAVQICKGMDYLGSR K Y A C K G 1 0 0 0 1 1 0 0 0 1 0 1 0 0 0 0 0 0 1 1 0 7 0 880.44767 P23458 P23458 983 989 JAK1 Tyrosine-protein kinase JAK1 yes yes 2 0.036116 84.359 By matching By matching By matching By matching By matching By MS/MS 1 1 1635100 0 0 0 0 433520 1201600 8857 868 8975 39765;39766 26270 26270 1 YCPICDVQVHK VRYLETSKYCPICDVQ ICDVQVHKTRPLLNIR K Y C H K T 0 0 0 1 2 1 0 0 1 1 0 1 0 0 1 0 0 0 1 2 0 11 0 1417.6482 Q5T8Z5;Q5T8Z6;Q5T8Z4;Q5T8Z1;P35226;Q5T8Z2;E9PC92 Q5T8Z5 52 62 BMI1 Polycomb complex protein BMI-1 yes no 3 0.00025994 98.04 By matching By matching By matching By matching By matching By MS/MS 1 1 6128200 0 0 0 0 2523800 3604300 8858 893 8976 39767;39768 26271 26271 1 YCQYAFDLK KNELKHVKYCQYAFDL CQYAFDLKCDSVCVNP K Y C L K C 1 0 0 1 1 1 0 0 0 0 1 1 0 1 0 0 0 0 2 0 0 9 0 1206.5379 E7EUB6;Q9BYG6;Q13485 E7EUB6 114 122 SMAD4 Mothers against decapentaplegic homolog 4 yes no 2 1.2787E-11 119.75 By matching By MS/MS By matching By matching By matching By matching 1 18795000 0 18795000 0 0 0 0 8859 385 8977 39769 26272 26272 1 YCVEEEEK DFQKDFVKYCVEEEEK YCVEEEEKAAEMHKMK K Y C E K A 0 0 0 0 1 0 4 0 0 0 0 1 0 0 0 0 0 0 1 1 0 8 0 1084.4383 P78347-2;P78347-4;P78347-3;B4DH52;P78347;Q86U51;C9J6M0 P78347-2 79 86 GTF2I General transcription factor II-I yes no 2 0.02554 75.043 By matching By MS/MS By matching By matching By matching By matching 1 572860 0 572860 0 0 0 0 8860 90 8978 39770 26273 26273 1 YDENLMK PLPAGVAKYDENLMKK KYDENLMKKTAVPPSR K Y D M K K 0 0 1 1 0 0 1 0 0 0 1 1 1 0 0 0 0 0 1 0 0 7 0 911.40587 Q7Z5J4-3;E7EVZ3;Q7Z5J4;A8MTC3;Q7Z5J4-2;C9JWB0;A8MXE8;Q7Z5J4-4;E7ETW1 Q7Z5J4-3 141 147 RAI1 Retinoic acid-induced protein 1 yes no 2 0.015986 104.45 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 9138200 0 0 3843100 1013800 1229100 3052200 8861 39 8979 39771;39772;39773;39774 26274;26275 26275 2 YDGIILPGK AMRWFQQKYDGIILPG DGIILPGK________ K Y D G K - 0 0 0 1 0 0 0 2 0 2 1 1 0 0 1 0 0 0 1 0 0 9 0 974.54368 P62913;P62913-2 P62913 170 178 RPL11 60S ribosomal protein L11 yes no 2 0.0064746 96.034 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 33560000 0 3545700 0 4430500 9912300 15671000 8862 998 8980 39775;39776;39777;39778 26276;26277;26278;26279 26277 4 YDLILDEQAEDSK VKPKQDTKYDLILDEQ DEQAEDSKSSHSHTSK K Y D S K S 1 0 0 3 0 1 2 0 0 1 2 1 0 0 0 1 0 0 1 0 0 13 0 1537.7148 Q8WUA2 Q8WUA2 363 375 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 2 0.0014137 89.26 By matching By matching By matching By MS/MS By matching By matching 1 3622100 0 0 0 3622100 0 0 8863 1339 8981 39779 26280 26280 1 YDSCCVIDK LHPTYSCKYDSCCVID DSCCVIDKITRNQCQL K Y D D K I 0 0 0 2 2 0 0 0 0 1 0 1 0 0 0 1 0 0 1 1 0 9 0 1158.4685 P10827-2;P10827-4;P10827-3;P10827 P10827-2 93 101 THRA Thyroid hormone receptor alpha yes no 2 0.006833 90.15 By matching By matching By matching By matching By matching By MS/MS 1 1 2149400 0 678560 0 0 0 1470900 8864 821 8982 39780;39781 26281 26281 1 YDSLLEQGLVEAALVSK RNRKRSIKYDSLLEQG VEAALVSKISSPSDKK K Y D S K I 2 0 0 1 0 1 2 1 0 0 4 1 0 0 0 2 0 0 1 2 0 17 0 1833.9724 O96028-5;O96028-3;O96028;O96028-6;D6R9V2;D6RIS1;O96028-7 O96028-5 175 191 WHSC1 Histone-lysine N-methyltransferase NSD2 yes no 2 5.25E-239 168.08 By matching By matching By matching By MS/MS By matching By matching 1 40120000 0 0 0 40120000 0 0 8865 779 8983 39782 26282 26282 1 YEAAGEAVKTLKK VGVKKTVKYEAAGEAV EAVKTLKKTQPTVINN K Y E K K T 3 0 0 0 0 0 2 1 0 0 1 3 0 0 0 0 1 0 1 1 0 13 2 1406.7769 O15226;G3V1N1 O15226 501 513 NKRF NF-kappa-B-repressing factor yes no 3 0.020459 59.155 By matching By matching By matching By MS/MS By matching By matching 1 1 1 2132500 1083900 0 503070 545600 0 0 8866 578 8984 39783;39784;39785 26283 26283 1 YEALQTFAR ELDALRSKYEALQTFA EALQTFARTVARSPVA K Y E A R T 2 1 0 0 0 1 1 0 0 0 1 0 0 1 0 0 1 0 1 0 0 9 0 1097.5506 O15525;O60675 O15525 111 119 MAFG;MAFK Transcription factor MafG;Transcription factor MafK yes no 2 0.022306 68.557 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 10062000 1655800 764980 0 3950300 685250 3005200 8867 707 8985 39786;39787;39788;39789;39790 26284 26284 1 YEDTFLESEEIGTK KDSEHNEKYEDTFLES ESEEIGTKVEVVERKE K Y E T K V 0 0 0 1 0 0 4 1 0 1 1 1 0 1 0 1 2 0 1 0 0 14 0 1659.7516 O95243-2 O95243-2 348 361 MBD4 Methyl-CpG-binding domain protein 4 no no 2 1.7581E-13 106.42 By matching By matching By matching By MS/MS By matching By MS/MS 1 1 203140000 0 0 0 6788800 0 196350000 8868 769 8986 39791;39792 26285;26286 26285 2 YEEIVKEVSTYIKK EPPYSQKRYEEIVKEV EVSTYIKKIGYNPDTV R Y E K K I 0 0 0 0 0 0 3 0 0 2 0 3 0 0 0 1 1 0 2 2 0 14 2 1727.9346 Q5VTE0;P68104;Q6IQ15;F8W6I0 Q5VTE0 167 180 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 3 0.017784 78.529 By matching By matching By matching By MS/MS By matching By matching 1 0 0 0 0 0 0 0 8869 1006 8987 39793 26287 26287 1 YEELQITAGR AESLYQSKYEELQITA ELQITAGRHGDSVRNS K Y E G R H 1 1 0 0 0 1 2 1 0 1 1 0 0 0 0 0 1 0 1 0 0 10 0 1178.5932 P04264;CON__P04264;P04259;F5H6G5 P04264 377 386 KRT1;KRT6B Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 6B no no 2 8.6523E-116 164.33 By matching By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 51176000 1777100 14745000 15507000 7358400 3374200 8414500 + 8870 789;788 8988 39794;39795;39796;39797;39798;39799 26288;26289;26290;26291;26292 26288 5 YEELQITAGRHGDSVR AESLYQSKYEELQITA GRHGDSVRNSKIEISE K Y E V R N 1 2 0 1 0 1 2 2 1 1 1 0 0 0 0 1 1 0 1 1 0 16 1 1829.902 P04264;CON__P04264 P04264 377 392 KRT1 Keratin, type II cytoskeletal 1 yes no 3;4 0.0068883 47.301 By matching By MS/MS By matching By MS/MS By matching By matching 2 2 2 2 2 34756000 0 11041000 12899000 4052300 2783500 3980500 + 8871 789 8989 39800;39801;39802;39803;39804;39805;39806;39807;39808;39809 26293;26294;26295 26293 3 YEELQITAGRHGDSVRNSK AESLYQSKYEELQITA GDSVRNSKIEISELNR K Y E S K I 1 2 1 1 0 1 2 2 1 1 1 1 0 0 0 2 1 0 1 1 0 19 2 2159.0719 P04264;CON__P04264 P04264 377 395 KRT1 Keratin, type II cytoskeletal 1 yes no 3;4;5 0.0004392 65.231 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 3 3 2 1 3 54044000 0 13197000 22697000 7014800 2683200 8452100 + 8872 789 8990 39810;39811;39812;39813;39814;39815;39816;39817;39818;39819;39820;39821 26296;26297;26298;26299;26300 26300 5 YEELQQTAGR AESWYQTKYEELQQTA ELQQTAGRHGDDLRNT K Y E G R H 1 1 0 0 0 2 2 1 0 0 1 0 0 0 0 0 1 0 1 0 0 10 0 1193.5677 P13647;CON__P13647;E7EU87;CON__Q5XQN5;CON__Q922U2;H0YI76;H0YIN9 P13647 365 374 KRT5 Keratin, type II cytoskeletal 5 yes no 2 0.0090012 77.062 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2188200 0 543160 797000 421140 0 426890 + 8873 299 8991 39822;39823;39824;39825 26301;26302 26301 2 YEELQVTVGR AEALYHSKYEELQVTV ELQVTVGRHGDSLKEI K Y E G R H 0 1 0 0 0 1 2 1 0 0 1 0 0 0 0 0 1 0 1 2 0 10 0 1192.6088 P35908;CON__P35908 P35908 375 384 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 2 0.016893 66.267 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 1 5474500 198690 1294800 1523200 1258600 0 1199200 + 8874 302 8992 39826;39827;39828;39829;39830 26303 26303 1 YEHKEIEYVETVTSR QGSRNALKYEHKEIEY YVETVTSRQSEIQKFI K Y E S R Q 0 1 0 0 0 0 4 0 1 1 0 1 0 0 0 1 2 0 2 2 0 15 1 1881.9109 Q9UHR4 Q9UHR4 156 170 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 3 0.024873 41.088 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 3040600 0 0 770780 524000 460210 1285600 8875 1595 8993 39831;39832;39833;39834 26304 26304 1 YEHKEIEYVETVTSRQSEIQK QGSRNALKYEHKEIEY SRQSEIQKFIADGCKE K Y E Q K F 0 1 0 0 0 2 5 0 1 2 0 2 0 0 0 2 2 0 2 2 0 21 2 2595.2817 Q9UHR4 Q9UHR4 156 176 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 yes yes 4 0.0085125 40.968 By matching By matching By MS/MS By matching By matching By matching 1 2102900 0 0 2102900 0 0 0 8876 1595 8994 39835 26305 26305 1 YEIEETETVTK KSESRQERYEIEETET EETETVTKSYQKNDWR R Y E T K S 0 0 0 0 0 0 4 0 0 1 0 1 0 0 0 0 3 0 1 1 0 11 0 1340.6347 Q05682-5;E9PGZ1;Q05682-4;F5H1Z9;E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682;C9J813 Q05682-5 154 164 CALD1 Caldesmon yes no 2 0.0051197 73.632 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 7392000 0 1916100 1539800 619400 1482300 1834400 8877 396 8995 39836;39837;39838;39839;39840 26306;26307;26308 26308 3 YELGRPAANTK KPYHKKRKYELGRPAA GRPAANTKIGPRRIHT K Y E T K I 2 1 1 0 0 0 1 1 0 0 1 1 0 0 1 0 1 0 1 0 0 11 1 1218.6357 Q5JR95;P62241 Q5JR95 27 37 RPS8 40S ribosomal protein S8 yes no 3 0.017384 57.785 By MS/MS By matching By matching By matching By matching By matching 1 563150 563150 0 0 0 0 0 8878 985 8996 39841 26309 26309 1 YELISETGGSHDK NEKRRGLKYELISETG ETGGSHDKRFVMEVEV K Y E D K R 0 0 0 1 0 0 2 2 1 1 1 1 0 0 0 2 1 0 1 0 0 13 0 1434.6627 Q12906-5;Q12906-4;Q12906-2;Q12906-6;Q12906-3;C9JFV5;Q12906;G5E9M5;B4DFG4 Q12906-5 541 553 ILF3 Interleukin enhancer-binding factor 3 no no 2;3 0.00018026 94.402 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 1 2 2 2 2 2 27550000 1459800 6605300 3536000 2129400 5232900 8586300 8879 243 8997 39842;39843;39844;39845;39846;39847;39848;39849;39850;39851;39852 26310;26311;26312;26313;26314;26315;26316;26317;26318;26319 26313 10 YELQLANPK VRHDPNMKYELQLANP ELQLANPKEFYHEVHR K Y E P K E 1 0 1 0 0 1 1 0 0 0 2 1 0 0 1 0 0 0 1 0 0 9 0 1074.571 Q6P2Q9 Q6P2Q9 2294 2302 PRPF8 Pre-mRNA-processing-splicing factor 8 yes yes 2 0.0062431 92.838 By matching By matching By matching By matching By matching By MS/MS 1 1 3809700 0 0 0 0 985770 2824000 8880 1224 8998 39853;39854 26320 26320 1 YELQQLEGSSDR QNELKNVKYELQQLEG QLEGSSDRILELDQEL K Y E D R I 0 1 0 1 0 2 2 1 0 0 2 0 0 0 0 2 0 0 1 0 0 12 0 1423.6579 Q92878-2;Q92878;Q92878-3;E7EN38;E7ESD9 Q92878-2 468 479 RAD50 DNA repair protein RAD50 yes no 2 4.0931E-07 101.56 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 2545800 0 1632100 0 0 913710 0 8881 1362 8999 39855;39856 26321;26322 26322 2 YETLVGTIGK SDEEMARRYETLVGTI TLVGTIGKKFARKRDH R Y E G K K 0 0 0 0 0 0 1 2 0 1 1 1 0 0 0 0 2 0 1 1 0 10 0 1079.5863 Q99547;H3BSB3;H3BNT4 Q99547 118 127 MPHOSPH6 M-phase phosphoprotein 6 yes no 2 0.012231 70.412 By matching By matching By matching By matching By matching By MS/MS 1 1 2249300 0 1108900 0 0 0 1140400 8882 1427 9000 39857;39858 26323 26323 1 YFEGVSPK VRNAKKIKYFEGVSPK YFEGVSPKSLKHSPED K Y F P K S 0 0 0 0 0 0 1 1 0 0 0 1 0 1 1 1 0 0 1 1 0 8 0 925.45453 P78527;E7EUY0;P78527-2 P78527 682 689 PRKDC DNA-dependent protein kinase catalytic subunit yes no 2 0.009317 101.43 By matching By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 64112000 4196400 5119700 6539900 5447300 13355000 29454000 8883 1012 9001 39859;39860;39861;39862;39863;39864 26324;26325;26326 26325 3 YFEQGKGTCPFGSK GMGKKACKYFEQGKGT GTCPFGSKCLYRHAYP K Y F S K C 0 0 0 0 1 1 1 3 0 0 0 2 0 2 1 1 1 0 1 0 0 14 1 1604.7293 B4DPR4;C9J494;Q9H000 B4DPR4 286 299 MKRN2 Probable E3 ubiquitin-protein ligase makorin-2 yes no 2 0.0028676 75.02 By matching By matching By matching By matching By MS/MS By matching 1 1 3437600 0 0 0 0 911100 2526500 8884 114 9002 39865;39866 26327;26328 26327 2 YFHPPAHLQAK RCSREKCKYFHPPAHL PPAHLQAKIKAAQYQV K Y F A K I 2 0 0 0 0 1 0 0 2 0 1 1 0 1 2 0 0 0 1 0 0 11 0 1307.6775 Q9NR56-3;Q9NR56-4;E9PBW7;Q9NR56-6;C9JP00;Q9NR56-2;Q9NR56-5;Q9NR56;H7C4T5;Q86VM6;C9JCX1;H7C4Y1;O95205;Q5VZF2-3;Q5VZF2-2;Q5VZF2 Q9NR56-3 168 178 MBNL1;MBLL;MBNL2 Muscleblind-like protein 1;Muscleblind-like protein 2 no no 3 1.4236E-06 106.88 By MS/MS By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 1 15094000 2334800 2902400 349640 0 5067500 4439300 8885 263;764 9003 39867;39868;39869;39870;39871 26329;26330;26331 26331 3 YFQLKNVTEHLK TLLFFNTKYFQLKNVT KNVTEHLKLSFAHVMR K Y F L K L 0 0 1 0 0 1 1 0 1 0 2 2 0 1 0 0 1 0 1 1 0 12 1 1518.8195 Q5VZL5-2;Q5VZL5;H7C1I7;Q5VZL5-3;Q5VZL5-4 Q5VZL5-2 1301 1312 ZMYM4 Zinc finger MYM-type protein 4 yes no 3 0.026573 49.28 By matching By matching By matching By matching By matching By MS/MS 1 1 1605200 0 0 0 384260 0 1220900 8886 1213 9004 39872;39873 26332 26332 1 YFRNYMSEHLLK MKKITLLKYFRNYMSE YMSEHLLKAGANITPR K Y F L K A 0 1 1 0 0 0 1 0 1 0 2 1 1 1 0 1 0 0 2 0 0 12 1 1599.7868 P53350;B4E083 P53350 481 492 PLK1 Serine/threonine-protein kinase PLK1 yes no 4 0.02676 49.448 By matching By matching By matching By matching By matching By MS/MS 1 4410100 0 0 0 0 0 4410100 8887 962 9005 39874 26333 26333 1 YFSSMAEFLKVKGEK KVAEANQKYFSSMAEF FLKVKGEKSGLMST__ K Y F E K S 1 0 0 0 0 0 2 1 0 0 1 3 1 2 0 2 0 0 1 1 0 15 2 1762.8964 Q8WWY3;E7EVX8 Q8WWY3 479 493 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 yes no 4 0.0003121 85.45 By matching By matching By matching By MS/MS By matching By matching 1 8037100 0 0 0 8037100 0 0 8888 1342 9006 39875 26334 26334 1 YFTCQCGSEK RFWDIKSKYFTCQCGS TCQCGSEKCKHSAEAI K Y F E K C 0 0 0 0 2 1 1 1 0 0 0 1 0 1 0 1 1 0 1 0 0 10 0 1278.5009 Q96KQ7-2;B0UZY3;Q96KQ7;B0UZY0;A2ABF8;B0UZY1;A2ABF9;H0YIM0;H0YHA9;A2BED6;A2BED7 Q96KQ7-2 1131 1140 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes no 2 0.035516 55.084 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 3153700 0 637570 438010 0 639000 1439100 8889 7 9007 39876;39877;39878;39879 26335;26336 26336 2 YFTCQCGSEKCK RFWDIKSKYFTCQCGS QCGSEKCKHSAEAIAL K Y F C K H 0 0 0 0 3 1 1 1 0 0 0 2 0 1 0 1 1 0 1 0 0 12 1 1566.6265 Q96KQ7-2;B0UZY3;Q96KQ7;B0UZY0;A2ABF8;B0UZY1;A2ABF9;H0YIM0;H0YHA9;A2BED6;A2BED7 Q96KQ7-2 1131 1142 EHMT2 Histone-lysine N-methyltransferase EHMT2 yes no 3 0.040313 44.614 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 3126100 0 680890 513050 343970 652760 935440 8890 7 9008 39880;39881;39882;39883;39884 26337 26337 1 YGEPGEVFINK EFKRLFAKYGEPGEVF PGEVFINKGKGFGFIK K Y G N K G 0 0 1 0 0 0 2 2 0 1 0 1 0 1 1 0 0 0 1 1 0 11 0 1251.6136 P23246;P23246-2 P23246 320 330 SFPQ Splicing factor, proline- and glutamine-rich yes no 2 0.0051197 73.632 By MS/MS By matching By matching By matching By matching By matching 1 17281000 17281000 0 0 0 0 0 8891 865 9009 39885 26338 26338 1 YGEPGEVFINKGK EFKRLFAKYGEPGEVF EVFINKGKGFGFIKLE K Y G G K G 0 0 1 0 0 0 2 3 0 1 0 2 0 1 1 0 0 0 1 1 0 13 1 1436.73 P23246;P23246-2 P23246 320 332 SFPQ Splicing factor, proline- and glutamine-rich yes no 2;3 8.1157E-10 106.26 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 2 2 2 2 2 51007000 8016700 6630200 5183800 5446400 13714000 12016000 8892 865 9010 39886;39887;39888;39889;39890;39891;39892;39893;39894;39895;39896;39897 26339;26340;26341;26342;26343;26344;26345 26342 7 YGETCFPK MGVPQIFKYGETCFPK YGETCFPKGRFERKRN K Y G P K G 0 0 0 0 1 0 1 1 0 0 0 1 0 1 1 0 1 0 1 0 0 8 0 1000.4324 P17028 P17028 229 236 ZNF24 Zinc finger protein 24 yes yes 2 0.00087146 85.161 By matching By matching By matching By matching By matching By MS/MS 1 1 1478300 0 330780 0 0 0 1147600 8893 844 9011 39898;39899 26346 26346 0 YGEYFPGTGDLR VMTVSFHKYGEYFPGT FPGTGDLRDIGAGKGK K Y G L R D 0 1 0 1 0 0 1 3 0 0 1 0 0 1 1 0 1 0 2 0 0 12 0 1373.6252 Q92769;B3KRS5;Q13547;Q5TEE2;F5GXM1 Q13547 201 212 HDAC2;HDAC1 Histone deacetylase 2;Histone deacetylase;Histone deacetylase 1 no no 2 4.4185E-05 100.04 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 50401000 0 12759000 0 0 0 37642000 8894 1086;1358 9012 39900;39901 26347;26348 26347 2 YGEYFPGTGDLRDIGAGKGK VMTVSFHKYGEYFPGT DIGAGKGKYYAVNYPL K Y G G K Y 1 1 0 2 0 0 1 6 0 1 1 2 0 1 1 0 1 0 2 0 0 20 2 2100.0276 Q92769;B3KRS5;Q13547;Q5TEE2;F5GXM1 Q13547 201 220 HDAC2;HDAC1 Histone deacetylase 2;Histone deacetylase;Histone deacetylase 1 no no 3;4 0.00078259 62.916 By matching By matching By matching By MS/MS By matching By MS/MS 2 2 511390000 0 0 0 24927000 0 486460000 8895 1086;1358 9013 39902;39903;39904;39905 26349;26350;26351;26352 26350 4 YGEYICDKTDEDVCSLECK PICVVCGRYGEYICDK DVCSLECKAKHLLQVK R Y G C K A 0 0 0 3 3 0 3 1 0 1 1 2 0 0 0 1 1 0 2 1 0 19 1 2382.9654 B7Z5N6;Q5T1V6-2;Q5T1V6;Q5T1V5 B7Z5N6 114 132 DDX59 Probable ATP-dependent RNA helicase DDX59 yes no 3 0.00081377 62.589 By matching By matching By matching By matching By matching By MS/MS 1 4392100 0 0 0 0 0 4392100 8896 190 9014 39906 26353 26353 1 YGEYICDKTDEDVCSLECKAK PICVVCGRYGEYICDK CSLECKAKHLLQVKEK R Y G A K H 1 0 0 3 3 0 3 1 0 1 1 3 0 0 0 1 1 0 2 1 0 21 2 2582.0975 B7Z5N6;Q5T1V6-2;Q5T1V6;Q5T1V5 B7Z5N6 114 134 DDX59 Probable ATP-dependent RNA helicase DDX59 yes no 4 1.4796E-05 62.739 By MS/MS By matching By matching By matching By matching By matching 1 22687000 22687000 0 0 0 0 0 8897 190 9015 39907 26354 26354 1 YGIPEPPEPK RAAERREKYGIPEPPE IPEPPEPKRKKQFDAG K Y G P K R 0 0 0 0 0 0 2 1 0 1 0 1 0 0 4 0 0 0 1 0 0 10 0 1125.5706 Q59HE6;H0YGC0;P52756;P98175-4;P98175-3;P98175-2;P98175 Q59HE6 402 411 RBM5;RBM10 RNA-binding protein 5;RNA-binding protein 10 yes no 2 0.035516 55.084 By matching By matching By matching By matching By matching By MS/MS 1 1028900 0 0 0 0 0 1028900 8898 620 9016 39908 26355 26355 1 YGLIYHASLVGQTSPK KSRRDTPKYGLIYHAS LVGQTSPKHKGKISRM K Y G P K H 1 0 0 0 0 1 0 2 1 1 2 1 0 0 1 2 1 0 2 1 0 16 0 1732.9148 Q9Y2X3 Q9Y2X3 338 353 NOP58 Nucleolar protein 58 yes yes 3 2.7227E-10 95.755 By matching By matching By matching By MS/MS By matching By matching 1 0 0 0 0 0 0 0 8899 1640 9017 39909 26356 26356 1 YGLIYHASLVGQTSPKHKGK KSRRDTPKYGLIYHAS TSPKHKGKISRMLAAK K Y G G K I 1 0 0 0 0 1 0 3 2 1 2 3 0 0 1 2 1 0 2 1 0 20 2 2183.1851 Q9Y2X3 Q9Y2X3 338 357 NOP58 Nucleolar protein 58 yes yes 4 0.00015866 75.564 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 23404000 0 0 3027600 7132200 9066800 4177900 8900 1640 9018 39910;39911;39912;39913 26357;26358;26359 26359 3 YGLSPGPVTESTRPVYLK ELFSQLRRYGLSPGPV STRPVYLKKLKKLREE R Y G L K K 0 1 0 0 0 0 1 2 0 0 2 1 0 0 3 2 2 0 2 2 0 18 1 1963.0415 Q9Y2U8 Q9Y2U8 24 41 LEMD3 Inner nuclear membrane protein Man1 yes yes 3 1.6572E-58 121.45 By MS/MS By MS/MS By matching By MS/MS By MS/MS By matching 1 1 1 1 99173000 49441000 33273000 0 9193900 7265900 0 8901 1638 9019 39914;39915;39916;39917 26360;26361;26362;26363 26362 4 YGLSPGPVTESTRPVYLKK ELFSQLRRYGLSPGPV TRPVYLKKLKKLREEE R Y G K K L 0 1 0 0 0 0 1 2 0 0 2 2 0 0 3 2 2 0 2 2 0 19 2 2091.1364 Q9Y2U8 Q9Y2U8 24 42 LEMD3 Inner nuclear membrane protein Man1 yes yes 4 0.034268 43.764 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 3767200 0 1600300 0 0 0 2166900 8902 1638 9020 39918;39919 26364;26365 26365 1 YGPQYGHPPPPPPPPEYGPHADSPVLMVYGLDQSK GHRRGPSRYGPQYGHP VYGLDQSKMNCDRVFN R Y G S K M 1 0 0 2 0 2 1 4 2 0 2 1 1 0 11 2 0 0 4 2 0 35 0 3783.8032 P14866;A6NIT8 P14866 359 393 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes no 4 1.2923E-64 95.141 By matching By matching By matching By matching By matching By MS/MS 1 95221000 0 0 0 0 0 95221000 8903 838 9021 39920 26366 26366 89 1 YGQHPPDAVDEPQMLTNEK YLDDPDLKYGQHPPDA PQMLTNEKLSIFDANE K Y G E K L 1 0 1 2 0 2 2 1 1 0 1 1 1 0 3 0 1 0 1 1 0 19 0 2167.9844 F5GX68 F5GX68 367 385 DNMT1 Cytosine-specific methyltransferase no no 3 0.0057732 44.054 By matching By matching By matching By matching By matching By MS/MS 1 2272600 0 0 0 0 0 2272600 8904 487 9022 39921 26367 26367 1 YGRLADPAVTDFPAGK TKLKLMARYGRLADPA VTDFPAGKGYPCKTCK R Y G G K G 3 1 0 2 0 0 0 2 0 0 1 1 0 1 2 0 1 0 1 1 0 16 1 1676.8522 B7Z367;Q9UL40;D6RJ07;Q9UL40-2;B7Z4J8 B7Z367 190 205 ZNF346 Zinc finger protein 346 yes no 3 1.451E-07 94.339 By matching By MS/MS By matching By MS/MS By matching By MS/MS 1 2 1 19489000 0 4951300 0 2921300 0 11617000 8905 184 9023 39922;39923;39924;39925 26368;26369;26370;26371;26372 26371 5 YGRVGDVYIPR SLRRVFEKYGRVGDVY VGDVYIPREPHTKAPR K Y G P R E 0 2 0 1 0 0 0 2 0 1 0 0 0 0 1 0 0 0 2 2 0 11 1 1293.683 Q9BRL6-2;Q9BRL6;Q8NAK9;Q01130;F5GYB8;H0YG49 Q8NAK9 37 47 SRSF8;SRSF2;SFRS2 Serine/arginine-rich splicing factor 8;Serine/arginine-rich splicing factor 2 no no 3 0.011288 63.624 By MS/MS By matching By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 24534000 6047000 1544900 0 4905400 9182100 2854700 8906 1441;1026 9024 39926;39927;39928;39929;39930 26373;26374;26375;26376;26377 26376 5 YGSGGGSKGGSISGGGYGSGGGK SGGGSGGRYGSGGGSK GYGSGGGKHSSGGGSR R Y G G K H 0 0 0 0 0 0 0 13 0 1 0 2 0 0 0 5 0 0 2 0 0 23 1 1889.8504 P35908;CON__P35908 P35908 573 595 KRT2 Keratin, type II cytoskeletal 2 epidermal yes no 3 0.0099511 38.724 By matching By matching By matching By MS/MS By matching By matching 1 1 1 1595600 0 0 982120 404900 0 208540 + 8907 302 9025 39931;39932;39933 26378;26379 26379 2 YGTFVNEEK LTLKDNSKYGTFVNEE GTFVNEEKMQNGFSRT K Y G E K M 0 0 1 0 0 0 2 1 0 0 0 1 0 1 0 0 1 0 1 1 0 9 0 1085.5029 O60934;F5H3R2;E5RGU1 O60934 74 82 NBN Nibrin yes no 2 4.001E-29 131.62 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 41022000 4383900 4783600 5950500 5336800 9512700 11054000 8908 736 9026 39934;39935;39936;39937;39938;39939 26380;26381;26382;26383;26384 26380 5 YGVNPGPIVGTTR DLLDQLVKYGVNPGPI GPIVGTTRKLYEKKLL K Y G T R K 0 1 1 0 0 0 0 3 0 1 0 0 0 0 2 0 2 0 1 2 0 13 0 1329.7041 P42166;P42167;P42167-2;G5E972;H0YJH7 P42166 127 139 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2 0.0014951 79.744 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 36975000 3967500 6421300 9857900 4745100 716630 11267000 8909 913;914 9027 39940;39941;39942;39943;39944;39945 26385;26386;26387;26388;26389;26390 26388 6 YGVNPGPIVGTTRK DLLDQLVKYGVNPGPI PIVGTTRKLYEKKLLK K Y G R K L 0 1 1 0 0 0 0 3 0 1 0 1 0 0 2 0 2 0 1 2 0 14 1 1457.7991 P42166;P42167;P42167-2;G5E972;H0YJH7 P42166 127 140 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin no no 2;3 4.8168E-14 104.41 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 4 2 2 416120000 56136000 76127000 60078000 31770000 78597000 113410000 8910 913;914 9028 39946;39947;39948;39949;39950;39951;39952;39953;39954;39955;39956;39957;39958;39959;39960 26391;26392;26393;26394;26395;26396;26397;26398;26399;26400;26401;26402 26393 11 YGVQADRVDK YSSGFGGKYGVQADRV VQADRVDKSAVGFDYQ K Y G D K S 1 1 0 2 0 1 0 1 0 0 0 1 0 0 0 0 0 0 1 2 0 10 1 1149.5778 Q14247;Q14247-3;Q14247-2;H7C314 Q14247 162 171 CTTN Src substrate cortactin yes no 2 1.8952E-23 128.01 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 8698200 1176900 1135400 2403600 830850 877470 2274000 8911 1104 9029 39961;39962;39963;39964;39965;39966 26403;26404;26405;26406 26404 4 YGYTEDPLEVR IDYGHASKYGYTEDPL TEDPLEVRIYDPEIPT K Y G V R I 0 1 0 1 0 0 2 1 0 0 1 0 0 0 1 0 1 0 2 1 0 11 0 1340.6248 Q14966-3;Q14966;Q14966-4;Q14966-2;C9JBI6;F5H330 Q14966-3 217 227 ZNF638 Zinc finger protein 638 yes no 2 0.036283 70.685 By matching By matching By matching By matching By matching By MS/MS 1 10208000 0 0 0 0 0 10208000 8912 1118 9030 39967 26407 26407 0 YHSDDYIKFLR ANAEEMTKYHSDDYIK DDYIKFLRSIRPDNMS K Y H L R S 0 1 0 2 0 0 0 0 1 1 1 1 0 1 0 1 0 0 2 0 0 11 1 1455.7147 Q13547;Q5TEE2 Q13547 67 77 HDAC1 Histone deacetylase 1 yes no 3 9.7962E-13 114.89 By matching By matching By matching By matching By matching By MS/MS 1 9538200 0 0 0 0 0 9538200 8913 1086 9031 39968 26408 26408 1 YHTINGHNAEVR VDKIVLQKYHTINGHN NGHNAEVRKALSRQEM K Y H V R K 1 1 2 0 0 0 1 1 2 1 0 0 0 0 0 0 1 0 1 1 0 12 0 1409.68 P22626;P22626-2 P22626 174 185 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 3 0.021403 49.448 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2926300 0 1126800 598600 0 578190 622800 8914 863 9032 39969;39970;39971;39972 26409 26409 1 YHTINGHNAEVRK VDKIVLQKYHTINGHN GHNAEVRKALSRQEMQ K Y H R K A 1 1 2 0 0 0 1 1 2 1 0 1 0 0 0 0 1 0 1 1 0 13 1 1537.775 P22626;P22626-2 P22626 174 186 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 3 0.0057781 54.343 By MS/MS By matching By matching By MS/MS By matching By MS/MS 1 1 1 1 1 11035000 1030400 4581100 3921700 730700 0 771380 8915 863 9033 39973;39974;39975;39976;39977 26410;26411;26412 26411 3 YHTINGHNCEVK VDKIVVQKYHTINGHN NGHNCEVKKALSKQEM K Y H V K K 0 0 2 0 1 0 1 1 2 1 0 1 0 0 0 0 1 0 1 1 0 12 0 1470.6674 E7EWI9;E7ERJ4;P51991-2;P51991 E7EWI9 166 177 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 2;3 0.020831 51.612 By matching By MS/MS By matching By MS/MS By matching By matching 1 2 1 1 1 1 42167000 275690 27005000 134950 7282300 77908 7391100 8916 371;955 9034 39978;39979;39980;39981;39982;39983;39984 26413;26414;26415 26415 3 YHTINGHNCEVKK VDKIVVQKYHTINGHN GHNCEVKKALSKQEMQ K Y H K K A 0 0 2 0 1 0 1 1 2 1 0 2 0 0 0 0 1 0 1 1 0 13 1 1598.7624 E7EWI9;E7ERJ4;P51991-2;P51991 E7EWI9 166 178 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 no no 3 0.0016503 63.966 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 3372800 0 1143200 1984300 245260 0 0 8917 371;955 9035 39985;39986;39987 26416;26417 26417 2 YIASVQGSTPSPR RSKADVERYIASVQGS QGSTPSPRQKSMKGFY R Y I P R Q 1 1 0 0 0 1 0 1 0 1 0 0 0 0 2 3 1 0 1 1 0 13 0 1361.6939 P49792;E9PGT0;F8WBP7 P49792 11 23 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 2 0.00036453 93.766 By MS/MS By matching By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 17746000 1933000 0 1421900 971830 5093400 8326000 8918 945 9036 39988;39989;39990;39991;39992 26418;26419;26420;26421 26419 4 YIASVQGSTPSPRQK RSKADVERYIASVQGS STPSPRQKSMKGFYFA R Y I Q K S 1 1 0 0 0 2 0 1 0 1 0 1 0 0 2 3 1 0 1 1 0 15 1 1617.8475 P49792;E9PGT0;F8WBP7 P49792 11 25 RANBP2 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase yes no 3 0.0026612 62.68 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 4612400 243340 0 1261300 699300 371880 2036600 8919 945 9037 39993;39994;39995;39996;39997 26422 26422 1 YICDNQDTISSK DDRADLAKYICDNQDT NQDTISSKLKECCDKP K Y I S K L 0 0 1 2 1 1 0 0 0 2 0 1 0 0 0 2 1 0 1 0 0 12 0 1442.6348 CON__P02769 CON__P02769 286 297 yes yes 2 4.8311E-290 190.66 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 3 3 4 3 4 6 580240000 60252000 84406000 53506000 41122000 103350000 237600000 + 8920 294 9038 39998;39999;40000;40001;40002;40003;40004;40005;40006;40007;40008;40009;40010;40011;40012;40013;40014;40015;40016;40017;40018;40019;40020 26423;26424;26425;26426;26427;26428;26429;26430;26431;26432;26433;26434;26435;26436;26437;26438;26439;26440;26441;26442 26432 20 YICDNQDTISSKLK DDRADLAKYICDNQDT DTISSKLKECCDKPLL K Y I L K E 0 0 1 2 1 1 0 0 0 2 1 2 0 0 0 2 1 0 1 0 0 14 1 1683.8138 CON__P02769 CON__P02769 286 299 yes yes 2;3 2.8741E-171 162.48 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 3 5 5 3 649320000 68747000 143390000 60912000 55724000 126770000 193780000 + 8921 294 9039 40021;40022;40023;40024;40025;40026;40027;40028;40029;40030;40031;40032;40033;40034;40035;40036;40037;40038;40039;40040 26443;26444;26445;26446;26447;26448;26449;26450;26451;26452;26453;26454;26455;26456;26457;26458 26454 16 YICENQDSISSK DDRADLAKYICENQDS NQDSISSKLKECCEKP K Y I S K L 0 0 1 1 1 1 1 0 0 2 0 1 0 0 0 3 0 0 1 0 0 12 0 1442.6348 P02768;CON__P02768-1;E7ESU5;H0YA55;D6RHD5;B7WNR0;P02768-2;C9JKR2 P02768 287 298 ALB Serum albumin yes no 2 0.0097741 59.155 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 3066100 0 284060 1475900 537700 768390 0 + 8922 293 9040 40041;40042;40043;40044 26459 26459 1 YICENQDSISSKLK DDRADLAKYICENQDS DSISSKLKECCEKPLL K Y I L K E 0 0 1 1 1 1 1 0 0 2 1 2 0 0 0 3 0 0 1 0 0 14 1 1683.8138 P02768;CON__P02768-1;E7ESU5;H0YA55;D6RHD5;B7WNR0;P02768-2;C9JKR2 P02768 287 300 ALB Serum albumin yes no 3 0.034931 40.477 By matching By matching By matching By MS/MS By matching By matching 1 663220 0 0 0 663220 0 0 + 8923 293 9041 40045 26460 26460 1 YIEGLSAESNSISK LHSEAYLKYIEGLSAE AESNSISKWDQTLAAR K Y I S K W 1 0 1 0 0 0 2 1 0 2 1 1 0 0 0 4 0 0 1 0 0 14 0 1496.7359 Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;Q86U86-8;Q86U86 Q86U86-5 1506 1519 PBRM1 Protein polybromo-1 yes no 2 0.0031492 60.55 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 3487800 0 0 0 0 1147700 2340100 8924 1260 9042 40046;40047 26461;26462 26461 2 YIENMSR CGVQDKAKYIENMSRG KYIENMSRGIYKLYCK K Y I S R G 0 1 1 0 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 7 0 911.4171 B4E0G4;Q8IWS0;E9PC97;Q5JRC6 B4E0G4 279 285 PHF6 PHD finger protein 6 yes no 2 0.010326 104.21 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 2446000 0 717100 0 502810 96474 1129700 8925 152 9043 40048;40049;40050;40051 26463 26463 1 YIGIVKQAGLER DRPGTARRYIGIVKQA VKQAGLERMRPGAYST R Y I E R M 1 1 0 0 0 1 1 2 0 2 1 1 0 0 0 0 0 0 1 1 0 12 1 1345.7718 P52597;B4DKS8 P52597 219 230 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 2;3 0.0018515 81.525 By MS/MS By MS/MS By MS/MS By matching By MS/MS By matching 2 2 2 3 4 1 35338000 10496000 3073000 10311000 6307300 3823000 1328200 8926 958 9044 40052;40053;40054;40055;40056;40057;40058;40059;40060;40061;40062;40063;40064;40065 26464;26465;26466;26467;26468;26469;26470;26471 26470 8 YINPAATK TFRQGVGKYINPAATK YINPAATKRAAEEEPS K Y I T K R 2 0 1 0 0 0 0 0 0 1 0 1 0 0 1 0 1 0 1 0 0 8 0 876.47052 Q13356;H7C2D2 Q13356 483 490 PPIL2 Peptidyl-prolyl cis-trans isomerase-like 2;Peptidyl-prolyl cis-trans isomerase yes no 2 0.039944 68.224 By matching By matching By matching By matching By matching By MS/MS 1 1 1882400 0 972510 0 0 0 909850 8927 1079 9045 40066;40067 26472 26472 1 YIQDFQR LPEKKKMKYIQDFQRE KYIQDFQREKQEFERN K Y I Q R E 0 1 0 1 0 2 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 7 0 968.47158 E9PKP7;P17480-2;P17480;E9PMM2 E9PKP7 161 167 UBTF Nucleolar transcription factor 1 yes no 2 0.011502 91.906 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 8137700 0 2480900 739480 871000 0 4046300 8928 455 9046 40068;40069;40070;40071 26473;26474 26473 2 YIQDFQREK LPEKKKMKYIQDFQRE IQDFQREKQEFERNLA K Y I E K Q 0 1 0 1 0 2 1 0 0 1 0 1 0 1 0 0 0 0 1 0 0 9 1 1225.6091 E9PKP7;P17480-2;P17480;E9PMM2 E9PKP7 161 169 UBTF Nucleolar transcription factor 1 yes no 3 0.011081 83.998 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1 1 1 8910400 1565900 1756200 741750 890580 1990300 1965700 8929 455 9047 40072;40073;40074;40075;40076;40077 26475;26476 26475 2 YISENESPRPSQK SPPKIIPKYISENESP ESPRPSQKKSRVKINW K Y I Q K K 0 1 1 0 0 1 2 0 0 1 0 1 0 0 2 3 0 0 1 0 0 13 1 1533.7423 O94782 O94782 321 333 USP1 Ubiquitin carboxyl-terminal hydrolase 1 yes yes 3 2.5493E-05 97.163 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 1 1 1 1 7742100 367090 1360400 2031000 753160 678520 2552000 8930 755 9048 40078;40079;40080;40081;40082;40083 26477;26478;26479;26480;26481 26479 5 YITASTFAQAR GTSQEIPKYITASTFA ASTFAQARAAEISAML K Y I A R A 3 1 0 0 0 1 0 0 0 1 0 0 0 1 0 1 2 0 1 0 0 11 0 1227.6248 Q99575;E5RK39 Q99575 101 111 POP1 Ribonucleases P/MRP protein subunit POP1 yes no 2 0.0074748 68.536 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 30381000 6487800 0 5082500 3103800 1686700 14020000 8931 1428 9049 40084;40085;40086;40087;40088 26482 26482 1 YIVKNPQAYLNYK HSVGRRARYIVKNPQA PQAYLNYKVCLAEVYQ R Y I Y K V 1 0 2 0 0 1 0 0 0 1 1 2 0 0 1 0 0 0 3 1 0 13 1 1612.8613 Q12789-3;Q12789;H7BYG6;H3BRD0 Q12789-3 1322 1334 GTF3C1 General transcription factor 3C polypeptide 1 yes no 3 0.010489 55.258 By matching By MS/MS By matching By matching By matching By matching 1 6207600 0 6207600 0 0 0 0 8932 1059 9050 40089 26483 26483 1 YKAVSISTEPPTYLREQK ILDGNDEKYKAVSIST PTYLREQKAKRNSQWV K Y K Q K A 1 1 0 0 0 1 2 0 0 1 1 2 0 0 2 2 2 0 2 1 0 18 2 2109.1106 Q12824-2;Q12824;G5E975;C9JTA6 Q12824-2 98 115 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 yes no 3 0.0058436 54.073 By MS/MS By matching By matching By matching By matching By matching 1 2816200 2816200 0 0 0 0 0 8933 592 9051 40090 26484 26484 1 YKQSLDPTVDEVK ENWQPRARYKQSLDPT DPTVDEVKKLCTSLRR R Y K V K K 0 0 0 2 0 1 1 0 0 0 1 2 0 0 1 1 1 0 1 2 0 13 1 1520.7722 Q8N122-2;F5H7J5;Q8N122 Q8N122-2 119 131 RPTOR Regulatory-associated protein of mTOR yes no 3 0.0049518 61.532 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 1 2699500 155760 602580 1114700 212120 0 614320 8934 528 9052 40091;40092;40093;40094;40095 26485;26486 26486 2 YKVFDAKPSAK HEVLTFIKYKVFDAKP FDAKPSAKTLSGLLEW K Y K A K T 2 0 0 1 0 0 0 0 0 0 0 3 0 1 1 1 0 0 1 1 0 11 2 1252.6816 Q8WVV9-4;C9J9G0;Q8WVV9;Q5JB52;B7WPG3;H7C0J6;H7C464 Q8WVV9-4 480 490 HNRNPLL;HNRPLL Heterogeneous nuclear ribonucleoprotein L-like yes no 3 0.015591 74.237 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 15954000 0 1820200 4865500 780440 3366600 5121000 8935 236 9053 40096;40097;40098;40099;40100 26487 26487 1 YLCASSVGGETLDK VAGQKGTKYLCASSVG VGGETLDKAVCSLQKE K Y L D K A 1 0 0 1 1 0 1 2 0 0 2 1 0 0 0 2 1 0 1 1 0 14 0 1498.6974 Q5VWN6 Q5VWN6 1123 1136 FAM208B Protein FAM208B yes yes 2 0.0058991 55.176 By MS/MS By matching By matching By matching By matching By matching 1 1 949700 305270 644430 0 0 0 0 8936 1208 9054 40101;40102 26488 26488 1 YLEEQIGAHRK QLLQMQQKYLEEQIGA EQIGAHRKSKKALSAK K Y L R K S 1 1 0 0 0 1 2 1 1 1 1 1 0 0 0 0 0 0 1 0 0 11 1 1342.6993 Q8NEZ4;Q8NEZ4-3;H7BY37;Q8NEZ4-2 Q8NEZ4 3197 3207 KMT2C Histone-lysine N-methyltransferase 2C yes no 3 0.0052473 64.73 By matching By matching By matching By matching By matching By MS/MS 1 721690 0 0 0 0 0 721690 8937 1324 9055 40103 26489 26489 1 YLGHVEVDESR GKCSFPVKYLGHVEVD HVEVDESRGMHICEDA K Y L S R G 0 1 0 1 0 0 2 1 1 0 1 0 0 0 0 1 0 0 1 2 0 11 0 1302.6204 P49757-4;P49757-2;P49757-3;P49757;B1P2N8;B1P2N7;B1P2N6;B1P2N5;G3V4S6;G3V433;G3V3R1 P49757-4 43 53 NUMB Protein numb homolog yes no 3 0.038261 59.198 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 8938 943 9056 40104 26490 26490 1 YLKDVTLQK MHIRKATKYLKDVTLQ LKDVTLQKQCVPFRRY K Y L Q K Q 0 0 0 1 0 1 0 0 0 0 2 2 0 0 0 0 1 0 1 1 0 9 1 1106.6336 P18621;B4E3C2 P18621 47 55 RPL17 60S ribosomal protein L17 yes no 2 0.00040371 112.36 By matching By matching By matching By matching By MS/MS By matching 1 1 1 10470000 0 0 1405300 2726700 6338200 0 8939 855 9057 40105;40106;40107 26491;26492 26492 2 YLLRRDDDEPGPWTK KSGFLVWRYLLRRDDD DEPGPWTKEGKDRIKK R Y L T K E 0 2 0 3 0 0 1 1 0 0 2 1 0 0 2 0 1 1 1 0 0 15 2 1859.9166 B5ME40;F5GXG0;Q96T88 B5ME40 193 207 UHRF1 E3 ubiquitin-protein ligase UHRF1 yes no 4 0.0054364 51.643 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 5849700 0 0 1627100 0 407680 3814900 8940 175 9058 40108;40109;40110 26493;26494 26493 2 YLMEEDEDAYKK QNVADYMRYLMEEDED EDEDAYKKQFSQYIKN R Y L K K Q 1 0 0 2 0 0 3 0 0 0 1 2 1 0 0 0 0 0 2 0 0 12 1 1532.6705 B3KTM6;P46777 B3KTM6 160 171 RPL5 60S ribosomal protein L5 yes no 3 0.0019013 68.536 By matching By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 5009500 1083000 941720 0 0 1746100 1238700 8941 75 9059 40111;40112;40113;40114 26495;26496;26497 26497 3 YLNEQLYSGPSSAAQR RLDGARFRYLNEQLYS GPSSAAQRLFQEDPEA R Y L Q R L 2 1 1 0 0 2 1 1 0 0 2 0 0 0 1 3 0 0 2 0 0 16 0 1782.8537 E9PPY3;O43159 E9PPY3 253 268 RRP8 Ribosomal RNA-processing protein 8 yes no 2 0.0017488 77.191 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 6591700 0 1415300 0 0 0 5176400 8942 462 9060 40115;40116 26498;26499;26500 26498 3 YLNGLGRLPAK DYPVLYGKYLNGLGRL GLGRLPAKTLKPEVRL K Y L A K T 1 1 1 0 0 0 0 2 0 0 3 1 0 0 1 0 0 0 1 0 0 11 1 1200.6979 Q8N2W9 Q8N2W9 115 125 PIAS4 E3 SUMO-protein ligase PIAS4 yes yes 2;3 0.0087955 82.831 By matching By matching By MS/MS By matching By matching By MS/MS 2 1 1 2 2 22583000 0 3499500 827060 282410 2249200 15725000 8943 1295 9061 40117;40118;40119;40120;40121;40122;40123;40124 26501;26502;26503 26503 3 YLPELMAEK VKMEPENKYLPELMAE LPELMAEKDSLDPSFT K Y L E K D 1 0 0 0 0 0 2 0 0 0 2 1 1 0 1 0 0 0 1 0 0 9 0 1092.5525 Q07666;Q07666-3;Q07666-2;E7ET98;O75525-2;F5H5F6;O75525;Q5VWX1 Q07666 103 111 KHDRBS1;KHDRBS3;KHDRBS2 KH domain-containing, RNA-binding, signal transduction-associated protein 1;KH domain-containing, RNA-binding, signal transduction-associated protein 3;KH domain-containing, RNA-binding, signal transduction-associated protein 2 yes no 2 4.3876E-29 131.11 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 276140000 14562000 155950000 29452000 18443000 12238000 45493000 8944 1045 9062 40125;40126;40127;40128;40129;40130 26504;26505;26506;26507;26508 26507 5 YLQEEVNINRKK FINDQYEKYLQEEVNI EVNINRKKRIPDTRVH K Y L K K R 0 1 2 0 0 1 2 0 0 1 1 2 0 0 0 0 0 0 1 1 0 12 2 1532.8311 Q9UHD8-3;Q9UHD8-7;Q9UHD8-2;Q9UHD8-5;Q9UHD8;F5GWR9;Q9UHD8-4;Q9UHD8-9;Q9UHD8-8 Q9UHD8-3 226 237 SEPT9 Septin-9 yes no 3 0.020606 62.633 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 1 1 5930200 588490 590910 1269100 759170 1325300 1397200 8945 1593 9063 40131;40132;40133;40134;40135;40136 26509 26509 1 YLQGVYQEVGAK GQLDLVVKYLQGVYQE VYQEVGAKVLQRTNGD K Y L A K V 1 0 0 0 0 2 1 2 0 0 1 1 0 0 0 0 0 0 2 2 0 12 0 1353.6929 Q2TAK8;Q2TAK8-2 Q2TAK8 631 642 MUM1 PWWP domain-containing protein MUM1 yes no 2 0.0032602 71.176 By matching By matching By matching By matching By matching By MS/MS 1 3449600 0 0 0 0 0 3449600 8946 1161 9064 40137 26510 26510 1 YLQQAFEK SMLQEYSKYLQQAFEK YLQQAFEKSTNASFTL K Y L E K S 1 0 0 0 0 2 1 0 0 0 1 1 0 1 0 0 0 0 1 0 0 8 0 1025.5182 A6NF48;Q9Y2X9;F5H1Z5 A6NF48 635 642 ZNF281 Zinc finger protein 281 yes no 2 0.0081101 103.74 By MS/MS By MS/MS By matching By MS/MS By matching By matching 1 1 1 1 1 4319800 759660 657940 0 858920 219050 1824200 8947 19 9065 40138;40139;40140;40141;40142 26511;26512;26513 26512 3 YLQTVQYGVHGNFPR FKRDPVWKYLQTVQYG GVHGNFPRLSYPTFFP K Y L P R L 0 1 1 0 0 2 0 2 1 0 1 0 0 1 1 0 1 0 2 2 0 15 0 1777.89 Q14527;E7ESN4;F5H3D6 Q14527 13 27 HLTF Helicase-like transcription factor yes no 2;3 9.3095E-43 122.46 By matching By matching By matching By matching By matching By MS/MS 2 27280000 0 0 0 0 0 27280000 8948 1107 9066 40143;40144 26514;26515;26516 26514 3 YLRASMTNLVK LLLAIIPKYLRASMTN ASMTNLVKMGFPSKTD K Y L V K M 1 1 1 0 0 0 0 0 0 0 2 1 1 0 0 1 1 0 1 1 0 11 1 1294.7067 C9J4N8;Q9HAV4;E7EQK9;H0Y9I3 C9J4N8 25 35 XPO5 Exportin-5 yes no 3 0.0027711 86.114 By matching By matching By MS/MS By MS/MS By matching By matching 1 1 1 7314600 0 0 1677000 701630 0 4936000 8949 227 9067 40145;40146;40147 26517;26518 26518 2 YLRPPNTSLFVR ________________ PNTSLFVRNVADDTRS R Y L V R N 0 2 1 0 0 0 0 0 0 0 2 0 0 1 2 1 1 0 1 1 0 12 1 1461.8092 O75494-5;Q5JRI1;O75494-4;Q5JRI3;O75494-3;O75494-2;O75494 O75494-5 4 15 SRSF10 Serine/arginine-rich splicing factor 10 yes no 2;3 2.2623E-223 181.66 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 107520000 0 8856500 21755000 12612000 0 64300000 8950 743 9068 40148;40149;40150;40151;40152 26519;26520;26521;26522;26523 26519 5 YLSELAEQPERK AVQKNSEKYLSELAEQ LAEQPERKITRNQKRK K Y L R K I 1 1 0 0 0 1 3 0 0 0 2 1 0 0 1 1 0 0 1 0 0 12 1 1461.7464 Q9H7Z6;Q9H7Z6-2 Q9H7Z6 126 137 KAT8 Histone acetyltransferase KAT8 yes no 2;3 8.8174E-14 112.94 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 3 2 2 2 2 48596000 3365200 10732000 7568600 6206000 7963000 12762000 8951 1501 9069 40153;40154;40155;40156;40157;40158;40159;40160;40161;40162;40163;40164;40165 26524;26525;26526;26527;26528;26529;26530;26531;26532;26533;26534;26535 26530 12 YLVLDEADR KIGLDFCKYLVLDEAD LVLDEADRMLDMGFEP K Y L D R M 1 1 0 2 0 0 1 0 0 0 2 0 0 0 0 0 0 0 1 1 0 9 0 1092.5451 O00571;O00571-2;B4DLU5;B4DXX7;O15523;B4E132;D6RCM4;E9PCD8;Q9NQI0-2;D6RDK4;Q9NQI0 O00571 343 351 DDX3X;DDX3Y;DDX4 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX4 yes no 2 0.019579 70.056 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1 24313000 0 5199700 0 2526800 801350 15785000 8952 693 9070 40166;40167;40168;40169 26536;26537 26537 2 YLWLKDCK GNATVGRRYLWLKDCK YLWLKDCKINLASKNK R Y L C K I 0 0 0 1 1 0 0 0 0 0 2 2 0 0 0 0 0 1 1 0 0 8 1 1124.5689 P42166 P42166 652 659 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin yes yes 2 0.038301 87.476 By matching By matching By MS/MS By matching By matching By matching 1 1 1 1 9062500 0 1580000 1988600 1005900 0 4488000 8953 913 9071 40170;40171;40172;40173 26538 26538 1 YLYEIAR DEKKFWGKYLYEIARR KYLYEIARRHPYFYAP K Y L A R R 1 1 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 2 0 0 7 0 926.48617 CON__P02769;P02768;CON__P02768-1;E7ESU5;H0YA55;D6RHD5;B7WNR0;H7C013 CON__P02769 161 167 ALB Serum albumin no no 2 5.5919E-21 132.96 By matching By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 2 1 2 3 1 454950000 331050 54667000 25170000 29506000 163440000 181840000 + 8954 294;293 9072 40174;40175;40176;40177;40178;40179;40180;40181;40182;40183 26539;26540;26541;26542;26543;26544 26539 6 YLYTLVITDKEK KFKVRCSRYLYTLVIT LVITDKEKAEKLKQSL R Y L E K A 0 0 0 1 0 0 1 0 0 1 2 2 0 0 0 0 2 0 2 1 0 12 1 1484.8126 P63173 P63173 41 52 RPL38 60S ribosomal protein L38 yes yes 2 1.0821E-17 114.72 By matching By MS/MS By matching By matching By matching By matching 1 11462000 0 11462000 0 0 0 0 8955 1005 9073 40184 26545 26545 1 YMACCLLYRGDVVPK KCDPRHGKYMACCLLY YRGDVVPKDVNAAIAT K Y M P K D 1 1 0 1 2 0 0 1 0 0 2 1 1 0 1 0 0 0 2 2 0 15 1 1843.8783 G3V1U9;Q9BQE3;Q71U36;P68363;F5H5D3;F8VXZ4;E9PGK3;A6NHL2-2;A6NHL2;A8MUB1;P68366 G3V1U9 277 291 TUBA1A;TUBA1C;TUBA1B;TUBAL3;TUBA4A Tubulin alpha-1A chain;Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha chain-like 3;Tubulin alpha-4A chain no no 3 1.6955E-14 102.73 By matching By MS/MS By matching By MS/MS By MS/MS By MS/MS 2 2 1 1 163860000 0 40394000 0 37460000 19850000 66153000 8956 518;44 9074;9075 40185;40186;40187;40188;40189;40190 26546;26547;26548;26549;26550;26551;26552 26547 9 7 YMENGMQAVK RIVIVMSKYMENGMQA ENGMQAVKIKSGEVAE K Y M V K I 1 0 1 0 0 1 1 1 0 0 0 1 2 0 0 0 0 0 1 1 0 10 0 1169.5209 O00257 O00257 269 278 CBX4 E3 SUMO-protein ligase CBX4 yes yes 2 0.015941 67.113 By matching By matching By matching By matching By matching By MS/MS 1 1 2154300 0 0 0 0 715100 1439200 8957 687 9076 40191;40192 26553 26553 1 YMLTHQELASDGEIETK KALAKCEKYMLTHQEL SDGEIETKLIKGDIYK K Y M T K L 1 0 0 1 0 1 3 1 1 1 2 1 1 0 0 1 2 0 1 0 0 17 0 1963.9197 Q02241-2;H7BYN4;Q02241;B4E1K0 Q02241-2 754 770 KIF23 Kinesin-like protein KIF23 yes no 3 0.0013943 69.111 By MS/MS By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 1 13050000 3724800 1733800 3792100 1006600 0 2792900 8958 660 9077 40193;40194;40195;40196;40197 26554;26555;26556;26557;26558 26557 5 YMPQNPCIIATK EGEVNRARYMPQNPCI NPCIIATKTPSSDVLV R Y M T K T 1 0 1 0 1 1 0 0 0 2 0 1 1 0 2 0 1 0 1 0 0 12 0 1434.6999 Q09028-3;Q09028;Q09028-2;Q09028-4 Q09028-3 132 143 RBBP4 Histone-binding protein RBBP4 yes no 2 0.0018056 80.17 By matching By matching By MS/MS By matching By matching By matching 1 7204600 0 0 7204600 0 0 0 8959 1051 9078 40198 26559 26559 1 YMPQNPHIIATK EGEVNRARYMPQNPHI NPHIIATKTPSSDVLV R Y M T K T 1 0 1 0 0 1 0 0 1 2 0 1 1 0 2 0 1 0 1 0 0 12 0 1411.7282 Q16576;E9PC52;Q16576-2;Q5JP01 Q16576 131 142 RBBP7 Histone-binding protein RBBP7 yes no 3 0.0063536 61.48 By matching By MS/MS By MS/MS By matching By matching By MS/MS 1 1 1 1 21045000 0 2902700 5891000 0 791610 11459000 8960 1153 9079 40199;40200;40201;40202 26560;26561;26562 26561 3 YMVENHGEDYK RDLIDYVRYMVENHGE ENHGEDYKAMARDEKN R Y M Y K A 0 0 1 1 0 0 2 1 1 0 0 1 1 0 0 0 0 0 2 1 0 11 0 1383.5765 Q9Y3C1;D6RIC3;E7ERV7;E7ESQ0;D6RGD3 Q9Y3C1 121 131 NOP16 Nucleolar protein 16 yes no 2 0.0097609 65.179 By matching By MS/MS By matching By matching By MS/MS By matching 1 1 1 1750700 0 401490 0 0 691340 657890 8961 1645 9080 40203;40204;40205 26563;26564 26564 2 YNFRFEEPDSASVK KQEDFEQKYNFRFEEP EPDSASVKTYPRSIAS K Y N V K T 1 1 1 1 0 0 2 0 0 0 0 1 0 2 1 2 0 0 1 1 0 14 1 1687.7842 Q8N9T8;D3YTE0;Q8N9T8-2;F5H196 Q8N9T8 304 317 KRI1 Protein KRI1 homolog yes no 3 1.544E-12 101.32 By matching By MS/MS By matching By matching By matching By matching 1 14274000 0 14274000 0 0 0 0 8962 1312 9081 40206 26565;26566 26566 2 YNGVFQECCQAEDK ELLYYANKYNGVFQEC ECCQAEDKGACLLPKI K Y N D K G 1 0 1 1 2 2 2 1 0 0 0 1 0 1 0 0 0 0 1 1 0 14 0 1746.6978 CON__P02769 CON__P02769 184 197 yes yes 2 0.0024521 63.727 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 9062500 0 3061300 0 476100 1577000 3948000 + 8963 294 9082 40207;40208;40209;40210 26567 26567 1 YNGVFQECCQAEDKGACLLPK ELLYYANKYNGVFQEC KGACLLPKIETMREKV K Y N P K I 2 0 1 1 3 2 2 2 0 0 2 2 0 1 1 0 0 0 1 1 0 21 1 2486.1029 CON__P02769 CON__P02769 184 204 yes yes 3 0.023304 70.944 By matching By MS/MS By matching By matching By matching By matching 1 6632500 0 6632500 0 0 0 0 + 8964 294 9083 40211 26568 26568 0 YNKFPQSEREK NNYEKHEKYNKFPQSE FPQSEREKRLFSLKGK K Y N E K R 0 1 1 0 0 1 2 0 0 0 0 2 0 1 1 1 0 0 1 0 0 11 2 1424.7048 P42695;E9PLE0 P42695 1072 1082 NCAPD3 Condensin-2 complex subunit D3 yes no 3 0.038408 62.166 By matching By matching By MS/MS By matching By matching By matching 1 1 756720 0 295040 461680 0 0 0 8965 917 9084 40212;40213 26569 26569 1 YNSGALHIK RVSGVKPKYNSGALHI NSGALHIKDILSPLFG K Y N I K D 1 0 1 0 0 0 0 1 1 1 1 1 0 0 0 1 0 0 1 0 0 9 0 1001.5294 G3V2F4;E7EPD8;Q9NUW8;G3V2J6;G3V2U6;Q9BRS7;G3V4W8;G3V5H9 G3V2F4 178 186 TDP1 Tyrosyl-DNA phosphodiesterase 1 yes no 2 0.032183 63.534 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2483900 0 415810 0 0 733870 1334300 8966 357 9085 40214;40215;40216 26570 26570 1 YNVSTTPYLQSVKK TRTSCLIKYNVSTTPY PYLQSVKKKVQFDGTN K Y N K K K 0 0 1 0 0 1 0 0 0 0 1 2 0 0 1 2 2 0 2 2 0 14 1 1626.8617 E9PD90;Q8WWK9 E9PD90 543 556 CKAP2 Cytoskeleton-associated protein 2 yes no 3 0.0012763 63.662 By MS/MS By matching By matching By matching By matching By matching 1 1 1539100 1005600 0 0 0 0 533500 8967 421 9086 40217;40218 26571 26571 1 YQAECSQFK FLDQNLQKYQAECSQF QAECSQFKAKLASLEE K Y Q F K A 1 0 0 0 1 2 1 0 0 0 0 1 0 1 0 1 0 0 1 0 0 9 0 1159.4968 P15924;P15924-2;H7BYR0 P15924 1065 1073 DSP Desmoplakin yes no 2 0.03981 60.102 By matching By matching By matching By matching By matching By MS/MS 1 1 1485300 0 0 201080 0 0 1284200 8968 840 9087 40219;40220 26572 26572 1 YQAECSQFKAK FLDQNLQKYQAECSQF ECSQFKAKLASLEELK K Y Q A K L 2 0 0 0 1 2 1 0 0 0 0 2 0 1 0 1 0 0 1 0 0 11 1 1358.6289 P15924;P15924-2;H7BYR0 P15924 1065 1075 DSP Desmoplakin yes no 3 0.0044407 77.288 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 14226000 918090 2409300 5046100 1970700 0 3882200 8969 840 9088 40221;40222;40223;40224;40225 26573;26574 26574 2 YQAEIPDRLVEGESDNRNQQK GEIRVGCKYQAEIPDR SDNRNQQKMEMKVWDP K Y Q Q K M 1 2 2 2 0 3 3 1 0 1 1 1 0 0 1 1 0 0 1 1 0 21 2 2488.1942 O94776 O94776 153 173 MTA2 Metastasis-associated protein MTA2 yes yes 3;4 2.7763E-05 68.243 By matching By MS/MS By MS/MS By matching By MS/MS By MS/MS 1 1 2 2 154780000 0 37842000 27173000 0 15679000 74084000 8970 754 9089 40226;40227;40228;40229;40230;40231 26575;26576;26577;26578;26579 26578 5 YQEQLVQEQELAK ELEYDMKKYQEQLVQE VQEQELAKHADVAGTA K Y Q A K H 1 0 0 0 0 4 3 0 0 0 2 1 0 0 0 0 0 0 1 1 0 13 0 1604.8046 P42695;E9PQA3 P42695 1259 1271 NCAPD3 Condensin-2 complex subunit D3 yes no 2 0.010633 54.898 By matching By MS/MS By matching By matching By matching By matching 1 1 1 1 3847900 0 798230 984890 0 277660 1787200 8971 917 9090 40232;40233;40234;40235 26580 26580 1 YQESQEPLNEVNSFPQK ESTRRRQKYQESQEPL EVNSFPQKISYTQFPN K Y Q Q K I 0 0 2 0 0 3 3 0 0 0 1 1 0 1 2 2 0 0 1 1 0 17 0 2035.9487 Q86Y07-4;Q86Y07-3;Q86Y07 Q86Y07-4 285 301 VRK2 Serine/threonine-protein kinase VRK2 yes no 2 3.0482E-32 111.58 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 26847000 7291600 0 8481700 0 1240500 9833000 8972 1271 9091 40236;40237;40238;40239 26581;26582;26583 26583 3 YQGDGIVEDEEETMENNEEK SPKWTHDKYQGDGIVE TMENNEEKKDRRKEEK K Y Q E K K 0 0 2 2 0 1 7 2 0 1 0 1 1 0 0 0 1 0 1 1 0 20 0 2356.9489 Q9NYF8-2;Q9NYF8;Q9NYF8-4;H0YF14;Q9NYF8-3;E9PK91;H0YF63 Q9NYF8-2 890 909 BCLAF1 Bcl-2-associated transcription factor 1 no no 2 6.3294E-67 124.76 By MS/MS By MS/MS By MS/MS By MS/MS By matching By MS/MS 1 1 1 1 1 1 29310000 8793900 8412900 5759100 5715400 628980 0 8973 1563;452 9092 40240;40241;40242;40243;40244;40245 26584;26585;26586;26587;26588 26588 5 YQGLEIK HKANPIRKYQGLEIKS KYQGLEIKSSDQPLTV K Y Q I K S 0 0 0 0 0 1 1 1 0 1 1 1 0 0 0 0 0 0 1 0 0 7 0 849.45962 Q9ULW0;Q96RR5 Q9ULW0 721 727 TPX2;HCA90 Targeting protein for Xklp2 yes no 2 0.0060524 95.352 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 1 114020000 6785800 18799000 15056000 7231700 25397000 40753000 8974 1611 9093 40246;40247;40248;40249;40250;40251 26589;26590 26590 2 YQGLEIKSSDQPLTVPVSPK HKANPIRKYQGLEIKS LTVPVSPKFSTRFHC_ K Y Q P K F 0 0 0 1 0 2 1 1 0 1 2 2 0 0 3 3 1 0 1 2 0 20 1 2185.163 Q9ULW0;Q96RR5 Q9ULW0 721 740 TPX2;HCA90 Targeting protein for Xklp2 yes no 3 0.00010711 71.853 By MS/MS By matching By matching By matching By matching By matching 1 70250000 70250000 0 0 0 0 0 8975 1611 9094 40252 26591 26591 1 YQPGKYPMPNQSVPIT VGGIHPVRYQPGKYPM PNQSVPIT________ R Y Q I T - 0 0 1 0 0 2 0 1 0 1 0 1 1 0 4 1 1 0 2 1 0 16 1 1818.8975 C9J3P9 C9J3P9 83 98 PLSCR4 yes yes 2 0.030091 47.774 By MS/MS By matching By matching By matching By matching By matching 1 0 0 0 0 0 0 0 8976 226 9095 40253 26592 26592 19 1 YQPQQDMSQEGYGTR LPSQSQQRYQPQQDMS SQEGYGTRSQPPLAPG R Y Q T R S 0 1 0 1 0 4 1 2 0 0 0 0 1 0 1 1 1 0 2 0 0 15 0 1786.7581 Q8NFD5;Q8NFD5-2;Q8NFD5-3;G3XAA0;H0Y7H8;C9JZD6;H0Y2R3 Q8NFD5 625 639 ARID1B AT-rich interactive domain-containing protein 1B yes no 2 0.009062 66.246 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 8977 1326 9096 40254 26593 26593 1 YQTDLYER YSNSHKSKYQTDLYER YQTDLYERERSKKRDR K Y Q E R E 0 1 0 1 0 1 1 0 0 0 1 0 0 0 0 0 1 0 2 0 0 8 0 1086.4982 Q8WUA2 Q8WUA2 461 468 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 yes yes 2 0.0061273 95.502 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 12708000 1115200 1542900 1605800 1378200 3434000 3631800 8978 1339 9097 40255;40256;40257;40258;40259;40260 26594;26595 26594 2 YRHSDGNLCVK MKARVVLKYRHSDGNL SDGNLCVKVTDDLVCL K Y R V K V 0 1 1 1 1 0 0 1 1 0 1 1 0 0 0 1 0 0 1 1 0 11 1 1347.6354 P49458;E9PE20;P49458-2 P49458 31 41 SRP9 Signal recognition particle 9 kDa protein yes no 3 0.0034215 83.045 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 2627500 0 1686200 748210 0 0 193030 8979 937 9098 40261;40262;40263 26596;26597 26596 2 YRPDSLDGPMEGDSCPTGNSMK SLLGSLWRYRPDSLDG CPTGNSMKELNFSHLP R Y R M K E 0 1 1 3 1 0 1 3 0 0 1 1 2 0 3 3 1 0 1 0 0 22 1 2412.9984 P54132;F5H7R6;H0YNU5 P54132 430 451 BLM Bloom syndrome protein yes no 3 0.024554 34.265 By matching By matching By matching By matching By matching By MS/MS 1 1 2895400 0 0 0 0 1062100 1833300 8980 965 9099 40264;40265 26598 26598 1 YRTTSSANNPNLMYQDECDRR GGGGGRSRYRTTSSAN YQDECDRRLRGVKDGG R Y R R R L 1 3 3 2 1 1 1 0 0 0 1 0 1 0 1 2 2 0 2 0 0 21 2 2590.1289 Q92841-1;Q92841;Q92841-2;C9JMU5;G5E9L5;Q9UQL5;Q92841-3;H3BLZ8;Q59F66 Q92841-1 488 508 DDX17 Probable ATP-dependent RNA helicase DDX17 no no 4 3.2732E-06 66.152 By matching By matching By matching By MS/MS By MS/MS By matching 1 1 1 1 8271000 0 0 1242400 1437100 2405000 3186500 8981 1361;629 9100 40266;40267;40268;40269 26599;26600 26600 2 YSAQIEDLQVK EAGRLRAKYSAQIEDL QIEDLQVKLQHAEADR K Y S V K L 1 0 0 1 0 2 1 0 0 1 1 1 0 0 0 1 0 0 1 1 0 11 0 1292.6612 P12755 P12755 663 673 SKI Ski oncogene yes yes 2 0.0020299 89.356 By matching By matching By matching By matching By matching By MS/MS 1 1670900 0 0 0 0 0 1670900 8982 828 9101 40270 26601 26601 1 YSCLVAGPHQR ACALVNSRYSCLVAGP LVAGPHQRHIALSPRY R Y S Q R H 1 1 0 0 1 1 0 1 1 0 1 0 0 0 1 1 0 0 1 1 0 11 0 1286.619 Q3B726 Q3B726 45 55 TWISTNB DNA-directed RNA polymerase I subunit RPA43 yes yes 2 0.0030558 84.507 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 6625800 729590 1675100 0 558130 1321600 2341400 8983 1164 9102 40271;40272;40273;40274;40275 26602;26603;26604 26602 3 YSCVILDEAHER ISDSLLRKYSCVILDE ILDEAHERTIHTDVLF K Y S E R T 1 1 0 1 1 0 2 0 1 1 1 0 0 0 0 1 0 0 1 1 0 12 0 1490.6824 Q9H6R0;Q9H6R0-2;I3L1L6 Q9H6R0 188 199 DHX33 Putative ATP-dependent RNA helicase DHX33 yes no 3 0.0031377 67.952 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 7842800 547050 2016600 1188100 0 0 4091100 8984 1496 9103 40276;40277;40278;40279 26605 26605 1 YSDDTPLPTPSYK RDRSVRGKYSDDTPLP PLPTPSYKYNEWADDR K Y S Y K Y 0 0 0 2 0 0 0 0 0 0 1 1 0 0 3 2 2 0 2 0 0 13 0 1482.6878 Q92620 Q92620 261 273 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 yes yes 2 0.02658 45.825 By matching By matching By matching By matching By matching By MS/MS 1 943370 0 0 0 0 0 943370 8985 1356 9104 40280 26606 26606 1 YSDYIKGSNLDAPEPYRIGR LYPEHYRKYSDYIKGS PEPYRIGRIKEIFCPK K Y S G R I 1 2 1 2 0 0 1 2 0 2 1 1 0 0 2 2 0 0 3 0 0 20 2 2313.139 F5GX68 F5GX68 976 995 DNMT1 Cytosine-specific methyltransferase no no 3;4 0.0050187 44.998 By matching By MS/MS By matching By MS/MS By matching By matching 2 1 38117000 0 30971000 0 7146100 0 0 8986 487 9105 40281;40282;40283 26607;26608;26609 26607 3 YSGSYNDYLR DAHSDYARYSGSYNDY GSYNDYLRAAQMHSGY R Y S L R A 0 1 1 1 0 0 0 1 0 0 1 0 0 0 0 2 0 0 3 0 0 10 0 1236.5411 Q96PK6 Q96PK6 648 657 RBM14 RNA-binding protein 14 yes yes 2 0.033976 55.721 By matching By matching By matching By matching By matching By MS/MS 1 1 2386700 0 0 0 0 552060 1834600 8987 1410 9106 40284;40285 26610 26610 1 YSLIPDEEEEK FMQPGGTKYSLIPDEE IPDEEEEKEEAKSAEF K Y S E K E 0 0 0 1 0 0 4 0 0 1 1 1 0 0 1 1 0 0 1 0 0 11 0 1350.6191 Q9NP64-2;B4DY38;Q9NP64;E7EPF0 Q9NP64-2 131 141 ZCCHC17 Nucleolar protein of 40 kDa yes no 2 0.0093835 65.695 By matching By MS/MS By matching By matching By matching By MS/MS 2 1 4166100 0 1659100 0 0 0 2507000 8988 141 9107 40286;40287;40288 26611;26612 26612 2 YSLIPDEEEEKEEAK FMQPGGTKYSLIPDEE EEEKEEAKSAEFEKPD K Y S A K S 1 0 0 1 0 0 6 0 0 1 1 2 0 0 1 1 0 0 1 0 0 15 1 1807.8364 Q9NP64-2;B4DY38;Q9NP64;E7EPF0 Q9NP64-2 131 145 ZCCHC17 Nucleolar protein of 40 kDa yes no 3 2.2672E-42 119.96 By MS/MS By matching By matching By matching By MS/MS By MS/MS 2 1 2 2 7105200 2405600 0 749400 0 1411200 2539000 8989 141 9108 40289;40290;40291;40292;40293;40294;40295 26613;26614;26615 26615 3 YSLNSGAVKNPK KCKKSGGKYSLNSGAV SGAVKNPKTQLGQKPF K Y S P K T 1 0 2 0 0 0 0 1 0 0 1 2 0 0 1 2 0 0 1 1 0 12 1 1276.6776 P13682;B4DUB8 P13682 203 214 ZNF35 Zinc finger protein 35 yes no 2;3 1.0703E-49 131.12 By MS/MS By MS/MS By matching By MS/MS By matching By MS/MS 4 2 2 2 2 2 38283000 8088400 3707800 5299000 3371900 9967700 7848700 8990 835 9109 40296;40297;40298;40299;40300;40301;40302;40303;40304;40305;40306;40307;40308;40309 26616;26617;26618;26619;26620;26621;26622;26623 26623 8 YSLVEAK ASASPKEKYSLVEAKR KYSLVEAKRKKLISPE K Y S A K R 1 0 0 0 0 0 1 0 0 0 1 1 0 0 0 1 0 0 1 1 0 7 0 808.43307 P15924;P15924-2 P15924 2029 2035 DSP Desmoplakin yes no 2 0.027408 86.472 By matching By matching By matching By matching By matching By MS/MS 1 1 2207700 0 0 0 832460 0 1375300 8991 840 9110 40310;40311 26624 26624 1 YSMDNTPHTPTPFK AFVTPDQKYSMDNTPH PHTPTPFKNALEKYGP K Y S F K N 0 0 1 1 0 0 0 0 1 0 0 1 1 1 3 1 3 0 1 0 0 14 0 1634.7399 F8W6N6;P10244 F8W6N6 486 499 MYBL2 Myb-related protein B yes no 2;3 0.001439 81.904 By MS/MS By matching By matching By matching By MS/MS By matching 1 1 1 2 1 8059200 762250 0 1396900 2176300 1225600 2498100 8992 554 9111 40312;40313;40314;40315;40316;40317 26625;26626 26625 2 YSMYNSVSQK LVEGTSSRYSMYNSVS MYNSVSQKLMAKMGFR R Y S Q K L 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 3 0 0 2 1 0 10 0 1205.5387 Q8N1G2;Q5T7F5 Q8N1G2 84 93 FTSJD2 Cap-specific mRNA (nucleoside-2-O-)-methyltransferase 1 yes no 2 0.015827 67.214 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2429900 0 445290 0 0 619700 1364900 8993 1294 9112 40318;40319;40320 26627 26627 1 YSNSEVVTGSGRQEAQK RFISELARYSNSEVVT SGRQEAQKTDAEYRKL R Y S Q K T 1 1 1 0 0 2 2 2 0 0 0 1 0 0 0 3 1 0 1 2 0 17 1 1838.8759 Q7L576;E7EQ04 Q7L576 366 382 CYFIP1 Cytoplasmic FMR1-interacting protein 1 yes no 3 0.0020289 55.975 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 4188200 0 849160 0 0 998850 2340200 8994 359 9113 40321;40322;40323 26628;26629 26628 2 YSPKTPPRWAEDQNSLLK LSPSKSYKYSPKTPPR EDQNSLLKMICQQVEA K Y S L K M 1 1 1 1 0 1 1 0 0 0 2 2 0 0 3 2 1 1 1 0 0 18 2 2129.0906 P49792;E9PGT0;Q7Z3J3;B4DZH4 P49792 795 812 RANBP2;RGPD4 E3 SUMO-protein ligase RanBP2;Putative peptidyl-prolyl cis-trans isomerase;RanBP2-like and GRIP domain-containing protein 4 no no 3;4 0.004149 56.339 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 1 40977000 14313000 1809400 13668000 2240900 6191800 2754100 8995 945;1251 9114 40324;40325;40326;40327;40328;40329 26630;26631;26632;26633;26634;26635 26631 6 YSPTSPTYSPTSPK VYTPTSPKYSPTSPTY TYSPTSPKYSPTSPTY K Y S P K Y 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 4 3 0 2 0 0 14 0 1511.7144 P24928 P24928 1909 1922 POLR2A DNA-directed RNA polymerase II subunit RPB1 yes no 2 0.0016287 68.171 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 2266400 234910 588310 0 0 921710 521500 8996 872 9115 40330;40331;40332;40333 26636 26636 1 YSQLVVETIRR KKKNQPGKYSQLVVET LVVETIRRLGERNGSS K Y S R R L 0 2 0 0 0 1 1 0 0 1 1 0 0 0 0 1 1 0 1 2 0 11 1 1362.7619 Q92522 Q92522 48 58 H1FX Histone H1x yes yes 3 0.0020012 80.102 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 6173400 1023900 0 0 0 3189000 1960500 8997 1350 9116 40334;40335;40336 26637;26638;26639 26639 3 YSQSDLEQTKTR HGLQMRLKYSQSDLEQ DLEQTKTRHLALNLQE K Y S T R H 0 1 0 1 0 2 1 0 0 0 1 1 0 0 0 2 2 0 1 0 0 12 1 1454.7001 Q14683;G8JLG1 Q14683 714 725 SMC1A Structural maintenance of chromosomes protein 1A yes no 3 0.011541 57.885 By matching By MS/MS By matching By matching By matching By matching 1 747570 0 747570 0 0 0 0 8998 1110 9117 40337 26640 26640 1 YSRGAGLGFSTAPNK YDRAMSWKYSRGAGLG GFSTAPNKIFYIDRNA K Y S N K I 2 1 1 0 0 0 0 3 0 0 1 1 0 1 1 2 1 0 1 0 0 15 1 1524.7685 Q1ED39;H3BNU8 Q1ED39 428 442 KNOP1 Lysine-rich nucleolar protein 1 yes no 3 1.0715E-08 99.069 By MS/MS By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 2 1 37355000 4616000 4536600 4924000 3714800 9469000 10095000 8999 1157 9118 40338;40339;40340;40341;40342;40343;40344 26641;26642;26643;26644;26645 26644 5 YSSICSEHFTPDCFK RKNFKPTKYSSICSEH HFTPDCFKRECNNKLL K Y S F K R 0 0 0 1 2 0 1 0 1 1 0 1 0 2 1 3 1 0 1 0 0 15 0 1876.776 Q9NVV9;E9PIS9 Q9NVV9 50 64 THAP1 THAP domain-containing protein 1 yes no 3 0.0020693 60.657 By matching By MS/MS By matching By matching By matching By matching 1 1 3717600 0 1463600 0 2254000 0 0 9000 1552 9119 40345;40346 26646 26646 1 YSTPTYTGGQSESHVQSASEDTVTER QFKSILLKYSTPTYTG SEDTVTERVEMSVNDK K Y S E R V 1 1 0 1 0 2 3 2 1 0 0 0 0 0 1 5 5 0 2 2 0 26 0 2816.2373 Q7Z2T5 Q7Z2T5 691 716 TRMT1L TRMT1-like protein yes yes 3 0.0015867 44.254 By MS/MS By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 33536000 10188000 0 4592600 0 4893400 13862000 9001 1248 9120 40347;40348;40349;40350 26647;26648;26649;26650 26649 4 YSTPTYTGGQSESHVQSASEDTVTERVEMSVNDK QFKSILLKYSTPTYTG VEMSVNDKAEASGCRR K Y S D K A 1 1 1 2 0 2 4 2 1 0 0 1 1 0 1 6 5 0 2 4 0 34 1 3718.6541 Q7Z2T5 Q7Z2T5 691 724 TRMT1L TRMT1-like protein yes yes 4 0.0002627 30.471 By matching By matching By matching By matching By matching By MS/MS 1 16096000 0 0 0 0 0 16096000 9002 1248 9121 40351 26651 26651 1 YSWNVKPNASR GEDYSHRRYSWNVKPN NVKPNASRAAQDRRRW R Y S S R A 1 1 2 0 0 0 0 0 0 0 0 1 0 0 1 2 0 1 1 1 0 11 1 1320.6575 O75319 O75319 294 304 DUSP11 RNA/RNP complex-1-interacting phosphatase yes yes 3 0.0060645 70.808 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 12514000 391000 2253100 1508500 0 2267800 6094100 9003 739 9122 40352;40353;40354;40355;40356 26652 26652 1 YTCSFCGK IEISQHAKYTCSFCGK YTCSFCGKTKMKRRAV K Y T G K T 0 0 0 0 2 0 0 1 0 0 0 1 0 1 0 1 1 0 1 0 0 8 0 1021.3997 C9J4Z3;P61513;G5E9R3;E9PEL3;A6NKH3 C9J4Z3 13 20 RPL37A;RPL37L 60S ribosomal protein L37a;Putative 60S ribosomal protein L37a-like yes no 2 0.022624 77.732 By matching By matching By matching By matching By matching By MS/MS 1 534800 0 0 0 0 0 534800 9004 229 9123 40357 26653 26653 1 YTIDAMQK EDAHEFLRYTIDAMQK YTIDAMQKACLNGCAK R Y T Q K A 1 0 0 1 0 1 0 0 0 1 0 1 1 0 0 0 1 0 1 0 0 8 0 968.46372 Q9P275;Q9P275-2;F5H3B9 Q9P275 215 222 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.0079237 98.458 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 5250200 0 285920 0 307050 1885900 2771300 9005 1576 9124 40358;40359;40360;40361 26654 26654 1 YTMALQQK EYRNAVSKYTMALQQK YTMALQQKKALSKTSK K Y T Q K K 1 0 0 0 0 2 0 0 0 0 1 1 1 0 0 0 1 0 1 0 0 8 0 981.49535 Q9UJX3-2;Q9UJX3 Q9UJX3-2 100 107 ANAPC7 Anaphase-promoting complex subunit 7 yes no 2 0.015457 84.916 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 9873900 1159600 1355100 1953000 1075000 0 4331100 9006 1599 9125 40362;40363;40364;40365;40366 26655;26656 26656 2 YTPSQQGVAFNSGAKQR LAPAQYIRYTPSQQGV FNSGAKQRVIRMVEMQ R Y T Q R V 2 1 1 0 0 3 0 2 0 0 0 1 0 1 1 2 1 0 1 1 0 17 1 1837.9071 Q13573;G3V3A4;G3V4X8;E9PGQ7 Q13573 179 195 SNW1 SNW domain-containing protein 1 yes no 3 0.0092594 44.045 By matching By MS/MS By MS/MS By matching By matching By matching 1 1 1 1 2929400 0 932350 686300 0 427260 883490 9007 583 9126 40367;40368;40369;40370 26657;26658 26658 2 YTRKVPQVSTPTLVEVSR FQNALIVRYTRKVPQV PTLVEVSRSLGKVGTR R Y T S R S 0 2 0 0 0 1 1 0 0 0 1 1 0 0 2 2 3 0 1 4 0 18 2 2059.1426 CON__P02769 CON__P02769 434 451 yes yes 3;4 1.3256E-45 118.66 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 4 2 2 218400000 83515000 20691000 43444000 26076000 8915900 35763000 + 9008 294 9127 40371;40372;40373;40374;40375;40376;40377;40378;40379;40380;40381;40382;40383;40384 26659;26660;26661;26662;26663;26664;26665;26666;26667;26668 26668 10 YTSIPTSVEESGK LFRVLLWRYTSIPTSV TSVEESGKKEKGKSIS R Y T G K K 0 0 0 0 0 0 2 1 0 1 0 1 0 0 1 3 2 0 1 1 0 13 0 1396.6722 H3BP78;Q9NVI1-2;Q9NVI1-1;Q9NVI1;F8W7R3 H3BP78 652 664 FANCI Fanconi anemia group I protein yes no 2 0.011377 73.877 By matching By matching By matching By matching By matching By MS/MS 1 0 0 0 0 0 0 0 9009 635 9128 40385 26669 26669 1 YTVQFSK RVRRVVPRYTVQFSKF RYTVQFSKFSLDCPSC R Y T S K F 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 1 1 0 1 1 0 7 0 871.44397 Q8IX12-2;Q8IX12;F5H1H2;F5H3E1;F5H2E6 Q8IX12-2 347 353 CCAR1 Cell division cycle and apoptosis regulator protein 1 yes no 2 0.025922 86.833 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 6097400 0 463580 728660 424180 1203800 3277200 9010 1285 9129 40386;40387;40388;40389;40390 26670 26670 1 YVCLANKNCPVDK RTVQKNAKYVCLANKN NKNCPVDKRRRNRCQY K Y V D K R 1 0 2 1 2 0 0 0 0 0 1 2 0 0 1 0 0 0 1 2 0 13 1 1579.7487 Q92570;Q92570-3;E9PBS2;Q92570-2;E9PBQ4;C9J8W4;Q6NXU0;F8W6I3;P43354;F5H4G9;H7BZ00 Q92570 326 338 NR4A3;NR4A2 Nuclear receptor subfamily 4 group A member 3;Nuclear receptor subfamily 4 group A member 2 yes no 3 1.1936E-16 112.84 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 2 1 1 1 1 22933000 8858400 0 4032900 4585900 3007200 2448800 9011 1352 9130 40391;40392;40393;40394;40395;40396 26671;26672;26673;26674;26675;26676;26677 26677 7 YVCSICDQGNFRK DMHKGMARYVCSICDQ CDQGNFRKHDHVRHMI R Y V R K H 0 1 1 1 2 1 0 1 0 1 0 1 0 1 0 1 0 0 1 1 0 13 1 1645.7341 Q9Y2K1 Q9Y2K1 634 646 ZBTB1 Zinc finger and BTB domain-containing protein 1 yes yes 3 0.0009348 81.709 By MS/MS By MS/MS By MS/MS By matching By MS/MS By MS/MS 2 1 1 1 2 1 8730600 803850 897550 947890 728650 2374500 2978100 9012 1633 9131 40397;40398;40399;40400;40401;40402;40403;40404 26678;26679;26680;26681;26682 26680 5 YVEVVPCSTEEMSR HKKVMKERYVEVVPCS CSTEEMSRVLMGGTLG R Y V S R V 0 1 0 0 1 0 3 0 0 0 0 0 1 0 1 2 1 0 1 3 0 14 0 1684.7437 Q9H6T0-2;Q9H6T0 Q9H6T0-2 537 550 ESRP2 Epithelial splicing regulatory protein 2 yes no 2 0.001107 72.815 By MS/MS By MS/MS By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 13995000 3846800 1557400 2706700 744840 3369300 1769700 9013 1498 9132 40405;40406;40407;40408;40409;40410 26683;26684;26685;26686;26687 26684 5 YVIESSSHTPELAR RRQSRMEKYVIESSSH SHTPELARCPSPTMSL K Y V A R C 1 1 0 0 0 0 2 0 1 1 1 0 0 0 1 3 1 0 1 1 0 14 0 1587.7893 Q8N3V7-2;Q8N3V7-3;Q8N3V7 Q8N3V7-2 494 507 SYNPO Synaptopodin yes no 3 0.0063548 52.891 By matching By MS/MS By matching By matching By matching By matching 1 2311600 0 2311600 0 0 0 0 9014 1297 9133 40411 26688 26688 1 YVLCTAPR VAKSQLLRYVLCTAPR YVLCTAPRAIPTTGRG R Y V P R A 1 1 0 0 1 0 0 0 0 0 1 0 0 0 1 0 1 0 1 1 0 8 0 978.49569 P25205 P25205 357 364 MCM3 DNA replication licensing factor MCM3 yes yes 2 0.0079237 98.458 By matching By matching By MS/MS By matching By matching By MS/MS 1 1 1 1 1 38290000 0 5144200 3507400 1541400 7981000 20116000 9015 873 9134 40412;40413;40414;40415;40416 26689;26690;26691 26690 3 YVLGYKQTLK QLVMKSGKYVLGYKQT LGYKQTLKMIRQGKAK K Y V L K M 0 0 0 0 0 1 0 1 0 0 2 2 0 0 0 0 1 0 2 1 0 10 1 1211.6914 E5RI99;P62888;E5RJH3 E5RI99 27 36 RPL30 60S ribosomal protein L30 yes no 2;3 3.3955E-221 184.71 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 5 4 2 3 7 2 4702700000 1540800000 120200000 104640000 965360000 1710600000 261020000 9016 342 9135 40417;40418;40419;40420;40421;40422;40423;40424;40425;40426;40427;40428;40429;40430;40431;40432;40433;40434;40435;40436;40437;40438;40439 26692;26693;26694;26695;26696;26697;26698;26699;26700;26701;26702;26703;26704;26705;26706;26707;26708;26709;26710 26708 19 YVLGYKQTLKMIR QLVMKSGKYVLGYKQT KQTLKMIRQGKAKLVI K Y V I R Q 0 1 0 0 0 1 0 1 0 1 2 2 1 0 0 0 1 0 2 1 0 13 2 1611.9171 E5RI99;P62888;E5RJH3 E5RI99 27 39 RPL30 60S ribosomal protein L30 yes no 3;4 0.0019992 77.279 By MS/MS By matching By matching By MS/MS By matching By matching 1 1 29169000 21810000 0 0 7359400 0 0 9017 342 9136 40440;40441 26711;26712 26711 2 YVLLNPK QLEALKSKYVLLNPKT KYVLLNPKTEGASRHK K Y V P K T 0 0 1 0 0 0 0 0 0 0 2 1 0 0 1 0 0 0 1 1 0 7 0 845.50109 Q9P275;Q9P275-2;F5H3B9 Q9P275 60 66 USP36 Ubiquitin carboxyl-terminal hydrolase 36 yes no 2 0.040642 79.454 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 1 22009000 1928800 2411800 1934200 2304500 4989000 8441100 9018 1576 9137 40442;40443;40444;40445;40446;40447 26713 26713 1 YVPKYVPLADVK MEESFSSKYVPKYVPL YVPLADVKSEKTKKGR K Y V V K S 1 0 0 1 0 0 0 0 0 0 1 2 0 0 2 0 0 0 2 3 0 12 1 1390.786 P42167;P42167-2;G5E972;H0YJH7 P42167 390 401 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin yes no 3 0.0023644 75.088 By matching By matching By matching By matching By matching By MS/MS 1 1255400 0 0 0 0 0 1255400 9019 914 9138 40448 26714 26714 1 YVQELAAVRADAETR ELDQAREKYVQELAAV VRADAETRLAEVQREA K Y V T R L 4 2 0 1 0 1 2 0 0 0 1 0 0 0 0 0 1 0 1 2 0 15 1 1690.8638 Q14980-2;Q14980;F5H2L0;H0YFY6;H0YH75 Q14980-2 1476 1490 NUMA1 Nuclear mitotic apparatus protein 1 yes no 3 0.0055448 52.5 By matching By matching By matching By matching By MS/MS By matching 1 1 1 9960400 0 0 879020 0 2150300 6931100 9020 1121 9139 40449;40450;40451 26715 26715 1 YWTESNGVESK PRTSQFTKYWTESNGV ESNGVESKSLTPALCR K Y W S K S 0 0 1 0 0 0 2 1 0 0 0 1 0 0 0 2 1 1 1 1 0 11 0 1298.5779 F5H2R4;F5H0Y0;F5H689;Q14680;B7Z6Y0;B7Z7Q1;A6P3A8;A6P3A7 F5H2R4 325 335 MELK Maternal embryonic leucine zipper kinase yes no 2 0.019704 43.502 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 11539000 1106700 0 3084300 1628300 1664600 4055400 9021 507 9140 40452;40453;40454;40455;40456 26716 26716 1 YYADGEDAYAMK RISEVEPKYYADGEDA GEDAYAMKRDLTQMAD K Y Y M K R 3 0 0 2 0 0 1 1 0 0 0 1 1 0 0 0 0 0 3 0 0 12 0 1395.5653 A6NM98;P41227;F8W808;A8MWP7;H0Y8T0;C9JN83;C9JW55;Q9BSU3 A6NM98 122 133 NAA10;NAA11 N-alpha-acetyltransferase 10;N-alpha-acetyltransferase 11 yes no 2 0.00025969 84.169 By matching By MS/MS By matching By matching By matching By MS/MS 1 1 1 1496000 0 866420 629620 0 0 0 9022 29 9141 40457;40458;40459 26717;26718 26717 2 YYCQNFAPNFK SRVLHAVKYYCQNFAP QNFAPNFKESEMNAIA K Y Y F K E 1 0 2 0 1 1 0 0 0 0 0 1 0 2 1 0 0 0 2 0 0 11 0 1450.634 Q96RE7 Q96RE7 442 452 NACC1 Nucleus accumbens-associated protein 1 yes yes 2 0.0025566 86.882 By matching By MS/MS By matching By matching By matching By matching 1 6338900 0 6338900 0 0 0 0 9023 1417 9142 40460 26719 26719 1 YYELHETIGTGGFAK KDYDELLKYYELHETI IGTGGFAKVKLACHIL K Y Y A K V 1 0 0 0 0 0 2 3 1 1 1 1 0 1 0 0 2 0 2 0 0 15 0 1684.8097 F5H2R4;F5H0Y0;F5H689;Q14680 F5H2R4 10 24 MELK Maternal embryonic leucine zipper kinase yes no 2 0.0086647 48.131 By matching By MS/MS By matching By matching By matching By matching 1 906370 0 906370 0 0 0 0 9024 507 9143 40461 26720 26720 1 YYETGSIRPR CVSKILGRYYETGSIR ETGSIRPRAIGGSKPR R Y Y P R A 0 2 0 0 0 0 1 1 0 1 0 0 0 0 1 1 1 0 2 0 0 10 1 1240.62 P26367;G3V3Q9;P26367-2 P26367 60 69 PAX6 Paired box protein Pax-6 no no 3 0.0086362 82.645 By matching By matching By matching By matching By matching By MS/MS 1 1 1 1 1 13943000 0 1085000 925510 550830 2108200 9273300 9025 877;878 9144 40462;40463;40464;40465;40466 26721 26721 1 YYGGGSEGGRAPK GGGGGGGRYYGGGSEG SEGGRAPKRLKTDNAG R Y Y P K R 1 1 0 0 0 0 1 5 0 0 0 1 0 0 1 1 0 0 2 0 0 13 1 1297.6051 P14866 P14866 47 59 HNRNPL Heterogeneous nuclear ribonucleoprotein L yes yes 2;3 6.9664E-05 96.866 By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS By MS/MS 2 2 2 2 2 2 42610000 4987500 7295300 11950000 4171800 4043400 10161000 9026 838 9145 40467;40468;40469;40470;40471;40472;40473;40474;40475;40476;40477;40478 26722;26723;26724;26725;26726;26727;26728 26728 7 YYKGLGTSTSK NHKKWKVKYYKGLGTS GLGTSTSKEAKEYFAD K Y Y S K E 0 0 0 0 0 0 0 2 0 0 1 2 0 0 0 2 2 0 2 0 0 11 1 1203.6136 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5 P11388 612 622 TOP2A DNA topoisomerase 2-alpha yes no 2;3 0.013852 70.685 By matching By MS/MS By MS/MS By matching By matching By matching 2 2 1 1 5920900 0 1936200 2884800 0 539060 560790 9027 655 9146 40479;40480;40481;40482;40483;40484 26729;26730;26731 26730 3 YYKGLGTSTSKEAK NHKKWKVKYYKGLGTS TSTSKEAKEYFADMKR K Y Y A K E 1 0 0 0 0 0 1 2 0 0 1 3 0 0 0 2 2 0 2 0 0 14 2 1531.7882 P11388;H7BXX8;P11388-2;P11388-3;P11388-4;C9J5P2;H7BXH5 P11388 612 625 TOP2A DNA topoisomerase 2-alpha yes no 3 0.0040062 79.744 By matching By matching By MS/MS By MS/MS By MS/MS By matching 1 1 1 1 1 3815600 0 913060 1281300 407780 467550 745910 9028 655 9147 40485;40486;40487;40488;40489 26732;26733;26734;26735 26733 4 YYPTEDVPRK VKLRKMPRYYPTEDVP PTEDVPRKLLSHGKKP R Y Y R K L 0 1 0 1 0 0 1 0 0 0 0 1 0 0 2 0 1 0 2 1 0 10 1 1266.6245 F8W181;Q02878;F8VZ45;F8VR69 F8W181 55 64 RPL6 60S ribosomal protein L6 yes no 3 0.015 57.785 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 5606700 683160 1183600 0 0 1910600 1829300 9029 551 9148 40490;40491;40492;40493 26736;26737;26738 26738 3 YYTGNYDQYVK HMHNKKLKYYTGNYDQ GNYDQYVKTRLELEEN K Y Y V K T 0 0 1 1 0 1 0 1 0 0 0 1 0 0 0 0 1 0 4 1 0 11 0 1412.6248 Q9UG63 Q9UG63 305 315 ABCF2 ATP-binding cassette sub-family F member 2 yes yes 2 0.00033846 97.734 By matching By matching By matching By matching By MS/MS By matching 1 1 1 1 1 9264000 0 1082400 1263300 1667200 2564400 2686800 9030 1589 9149 40494;40495;40496;40497;40498 26739 26739 1 YYTPYQEHVALHAPIK EFCGKQYKYYTPYQEH VALHAPIKSAFSRRVE K Y Y I K S 2 0 0 0 0 1 1 0 2 1 1 1 0 0 2 0 1 0 3 1 0 16 0 1928.9785 Q5T7W0-2 Q5T7W0-2 255 270 ZNF618 Zinc finger protein 618 yes yes 3;4 0.00045636 76.759 By MS/MS By matching By MS/MS By MS/MS By MS/MS By MS/MS 1 1 1 1 1 2 45248000 10985000 1474600 7271500 1282300 2299000 21935000 9031 1195 9150 40499;40500;40501;40502;40503;40504;40505 26740;26741;26742;26743;26744;26745;26746 26743 7 YYVTIIDAPGHR LWKFETSKYYVTIIDA IIDAPGHRDFIKNMIT K Y Y H R D 1 1 0 1 0 0 0 1 1 2 0 0 0 0 1 0 1 0 2 1 0 12 0 1403.7197 Q5VTE0;P68104;Q6IQ15;F8W6I0;A6PW80;Q5JR01 Q5VTE0 85 96 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 2;3 0.0021052 81.676 By matching By matching By matching By matching By MS/MS By MS/MS 1 2 35706000 0 0 0 0 3537900 32168000 9032 1006 9151 40506;40507;40508 26747;26748;26749 26747 2 YYVTIIDAPGHRDFIK LWKFETSKYYVTIIDA PGHRDFIKNMITGTSQ K Y Y I K N 1 1 0 2 0 0 0 1 1 3 0 1 0 1 1 0 1 0 2 1 0 16 1 1906.9941 Q5VTE0;P68104;Q6IQ15;F8W6I0;A6PW80;Q5JR01 Q5VTE0 85 100 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 yes no 2;3;4 6.3096E-140 148.85 By MS/MS By MS/MS By matching By MS/MS By MS/MS By MS/MS 1 2 2 2 5 1 4278300000 36217000 66034000 291510000 207090000 3403500000 273970000 9033 1006 9152 40509;40510;40511;40512;40513;40514;40515;40516;40517;40518;40519;40520;40521 26750;26751;26752;26753;26754;26755;26756;26757;26758;26759 26750 8 YYYAVVDCDSPETASK DYQFKRLKYYYAVVDC DSPETASKIYEDCDGL K Y Y S K I 2 0 0 2 1 0 1 0 0 0 0 1 0 0 1 2 1 0 3 2 0 16 0 1866.7982 Q9H501 Q9H501 433 448 ESF1 ESF1 homolog yes yes 2 0.030639 38.661 By matching By matching By matching By matching By matching By MS/MS 1 1 1 2202100 0 563230 0 511060 0 1127800 9034 1490 9153 40522;40523;40524 26760 26760 1 YYYQLNSK PPPGKSGKYYYQLNSK YYYQLNSKKHHPYQPD K Y Y S K K 0 0 1 0 0 1 0 0 0 0 1 1 0 0 0 1 0 0 3 0 0 8 0 1077.5131 O00257 O00257 150 157 CBX4 E3 SUMO-protein ligase CBX4 yes yes 2 0.011726 91.069 By matching By matching By matching By matching By MS/MS By MS/MS 1 1 1 1 1 1 30934000 3105900 2511300 4072300 5963300 7601500 7679500 9035 687 9154 40525;40526;40527;40528;40529;40530 26761;26762 26762 2